Citrus Sinensis ID: 026852
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 232 | 2.2.26 [Sep-21-2011] | |||||||
| Q500U8 | 326 | Tetraketide alpha-pyrone | no | no | 0.892 | 0.634 | 0.555 | 1e-58 | |
| Q9S9N9 | 344 | Cinnamoyl-CoA reductase 1 | no | no | 0.900 | 0.607 | 0.493 | 2e-49 | |
| Q9XES5 | 348 | Bifunctional dihydroflavo | N/A | no | 0.831 | 0.554 | 0.485 | 5e-48 | |
| Q84KP0 | 347 | Bifunctional dihydroflavo | N/A | no | 0.831 | 0.556 | 0.485 | 6e-48 | |
| P51110 | 337 | Dihydroflavonol-4-reducta | no | no | 0.905 | 0.623 | 0.451 | 3e-47 | |
| Q9SAH9 | 332 | Cinnamoyl-CoA reductase 2 | no | no | 0.900 | 0.629 | 0.483 | 2e-46 | |
| P51104 | 360 | Dihydroflavonol-4-reducta | N/A | no | 0.831 | 0.536 | 0.492 | 3e-46 | |
| P51102 | 382 | Dihydroflavonol-4-reducta | no | no | 0.818 | 0.497 | 0.472 | 4e-46 | |
| P51106 | 354 | Dihydroflavonol-4-reducta | N/A | no | 0.961 | 0.629 | 0.439 | 6e-46 | |
| P14720 | 380 | Dihydroflavonol-4-reducta | N/A | no | 0.883 | 0.539 | 0.457 | 3e-44 |
| >sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 150/209 (71%), Gaps = 2/209 (0%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGASGF+ASWLVK LL GY V TVRDP N K HL +L+GA ERL L KA+L+E
Sbjct: 8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLME 67
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
EGSFD+A+ GC GVFHTASPV+ + NP+ +I+ PA+ GTLNVLRSC K S+KRVVLTS
Sbjct: 68 EGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTS 127
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
S + + + P + +DE+ +++ LCK + WY+L+KTLAE+AAWKF++ENGIDLV
Sbjct: 128 SSSTVRIRDD-FDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLVT 186
Query: 190 IHPGTVIGPFFQPILNFGAEVILNLINGN 218
+ P ++GP P L A +L L+ G
Sbjct: 187 VLPSFLVGPSLPPDLCSTASDVLGLLKGE 215
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Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 149/215 (69%), Gaps = 6/215 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K VCVTGA G++ASW+VK+LL+RGYTVK TVR+P+ PK HLREL+G ERL L KA+L
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + +A+DGCDGVFHTASPV +D+P+ +V+PAV G V+ + A+ +KRVV+T
Sbjct: 71 DYEALKAAIDGCDGVFHTASPV---TDDPE-QMVEPAVNGAKFVINAAAEA-KVKRVVIT 125
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SSIGA+ ++ P+ V+DE+ +S+ CK K WY K +AE+AAW+ AKE G+DLV
Sbjct: 126 SSIGAVYMDPN-RDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLV 184
Query: 189 AIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAA 223
++P V+GP QP +N +L + G+ + A
Sbjct: 185 VLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA 219
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Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (484), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 7/200 (3%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKA 65
E + VCVTGASGF+ SWLV LL+ GYTV+ATVRDP N K +HL +L A L L+KA
Sbjct: 4 ESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKA 63
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
+L +EGSFD A+ GC GVFH A+P+ F S +P+ +++ P + G L++L++C K +++++
Sbjct: 64 DLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKL 123
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--W-YSLAKTLAEEAAWKFAKE 182
V TSS G + + E V DE+ +S+ C+ K W Y ++KTLAE+AAWK+AKE
Sbjct: 124 VFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180
Query: 183 NGIDLVAIHPGTVIGPFFQP 202
N ID + I P VIGPF P
Sbjct: 181 NNIDFITIIPTLVIGPFLMP 200
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Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (483), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 7/200 (3%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKA 65
E + VCVTGASGF+ SWLV LL+ GYTV+ATVRDP N K +HL +L A L L+KA
Sbjct: 4 ESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKA 63
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
+L +EGSFD A+ GC GVFH A+P+ F S +P+ +++ P + G L++L++C K +++++
Sbjct: 64 DLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKL 123
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--W-YSLAKTLAEEAAWKFAKE 182
V TSS G + + E V DE+ +S+ C+ K W Y ++KTLAE+AAWK+AKE
Sbjct: 124 VFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180
Query: 183 NGIDLVAIHPGTVIGPFFQP 202
N ID + I P VIGPF P
Sbjct: 181 NNIDFITIIPTLVIGPFLMP 200
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Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Pyrus communis (taxid: 23211) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 139/217 (64%), Gaps = 7/217 (3%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFK 64
+ + VCVTGASGF+ SWLV LL+R TV+ATVRDP N K +HL +L A L L+K
Sbjct: 3 SQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
A+L +EGSFD A+ GC GVFH A+P+ F S +P+ +++ P + G L +++SCA +++R
Sbjct: 63 ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRR 122
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW-YSLAKTLAEEAAWKFAK 181
+V TSS G + + E + V DE+ +S+ C+ K W Y ++KTLAE+AAWK+AK
Sbjct: 123 LVFTSSAGTVNIQEHQLP---VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 182 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
EN ID + I P V+GPF + L+ I GN
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216
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Vitis vinifera (taxid: 29760) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 143/215 (66%), Gaps = 6/215 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K+VCVTGA G++ASW+VKLLL+RGYTV+ TVR+P PK HLREL GA ERL L A+LL
Sbjct: 6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLHSADLL 65
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + + +DGCDGVFHTASP ++D+P+ +++PAV G V+ + AK +KRVV T
Sbjct: 66 DYEALCATIDGCDGVFHTASP---MTDDPET-MLEPAVNGAKFVIDAAAKA-KVKRVVFT 120
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SSIGA+ +N T ++DE +S+ CK K WY K LAE++AW+ AK G+DLV
Sbjct: 121 SSIGAVYMNPNRDT-QAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLV 179
Query: 189 AIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAA 223
++P V+GP Q +N IL + G+ + A
Sbjct: 180 VLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYA 214
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Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 136/203 (66%), Gaps = 10/203 (4%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHL 62
G+GE VCVTGASGF+ SWL+ LL+RGYTV+ATVRDP N+ K +HL +L A L L
Sbjct: 20 GQGE--TVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTL 77
Query: 63 FKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI 122
+KA+L EEGSFD+AVDGC GVFH A+P+ F S +P+ +++ P + G L++L+SC K +
Sbjct: 78 WKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA-KL 136
Query: 123 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--W-YSLAKTLAEEAAWKF 179
+RVV TSS G + T V DET +S + K W Y ++K LAE+AAWK+
Sbjct: 137 RRVVFTSSGGTV---NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKY 193
Query: 180 AKENGIDLVAIHPGTVIGPFFQP 202
A EN ++ ++I P V+GPF P
Sbjct: 194 AAENNLEFISIIPPLVVGPFIMP 216
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Dianthus caryophyllus (taxid: 3570) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 135/197 (68%), Gaps = 7/197 (3%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKA 65
+++ VCVTGASGF+ SWLV LL+RGY V+ATVRDP N K +HL +L A L L+KA
Sbjct: 4 QKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKA 63
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
+L EEGS+D A++GCDGVFH A+P+ F S +P+ +++ P V G L ++++C K +++R
Sbjct: 64 DLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRF 123
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNP--VLCKENKEW-YSLAKTLAEEAAWKFAKE 182
V TSS G + + E V DE +S+ ++ K+ W Y ++KTLAE+AAW FA+E
Sbjct: 124 VFTSSAGTVNVEEHQKN---VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEE 180
Query: 183 NGIDLVAIHPGTVIGPF 199
G+D ++I P V+GPF
Sbjct: 181 KGLDFISIIPTLVVGPF 197
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 147/230 (63%), Gaps = 7/230 (3%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLF 63
+G + V VTGASGFV SWLV LLQ GYTV+ATVRDP N KT+ L EL GA ERL ++
Sbjct: 2 DGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIW 61
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK 123
KA+L E+GSF+ A+ GC GVFH A+P+ F S +P+ +++ P V G L+++R+C + ++K
Sbjct: 62 KADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVK 121
Query: 124 RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW-YSLAKTLAEEAAWKFA 180
R+V TSS G++ + E P D+ +S+ C+ K W Y ++K LAE+AA ++A
Sbjct: 122 RIVFTSSAGSVNIEERPRP---AYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYA 178
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMI 230
ENG+D ++I P V+GPF + L LI GN +I ++ +
Sbjct: 179 SENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQL 228
|
Hordeum vulgare (taxid: 4513) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2 | Back alignment and function description |
|---|
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 134/212 (63%), Gaps = 7/212 (3%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGA+GF+ SWLV LL+RGY V ATVRDP N K +HL EL A L L+KA+L
Sbjct: 18 VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTV 77
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
EGSFD A+ GC GVFH A+P+ F S +P+ +++ P V G L+++ SCAK +++KR+V TS
Sbjct: 78 EGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTS 137
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNP--VLCKENKEW-YSLAKTLAEEAAWKFAKENGID 186
S G + + E + D+T +S+ + K+ W Y +K LAE+AA + AK+ ID
Sbjct: 138 SAGTLDVQE---QQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNID 194
Query: 187 LVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
++I P V+GPF P L+LI GN
Sbjct: 195 FISIIPPLVVGPFITPTFPPSLITALSLITGN 226
|
Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 232 | ||||||
| 225465329 | 323 | PREDICTED: bifunctional dihydroflavonol | 0.931 | 0.668 | 0.695 | 2e-87 | |
| 359487096 | 323 | PREDICTED: bifunctional dihydroflavonol | 0.931 | 0.668 | 0.691 | 8e-87 | |
| 297736314 | 326 | unnamed protein product [Vitis vinifera] | 0.922 | 0.656 | 0.720 | 1e-86 | |
| 224106117 | 341 | cinnamoyl CoA reductase-like protein [Po | 0.931 | 0.633 | 0.706 | 2e-86 | |
| 359487083 | 323 | PREDICTED: bifunctional dihydroflavonol | 0.935 | 0.671 | 0.690 | 4e-86 | |
| 225470851 | 326 | PREDICTED: bifunctional dihydroflavonol | 0.926 | 0.659 | 0.706 | 1e-85 | |
| 225470855 | 326 | PREDICTED: bifunctional dihydroflavonol | 0.926 | 0.659 | 0.706 | 1e-85 | |
| 147777135 | 1403 | hypothetical protein VITISV_030427 [Viti | 0.922 | 0.152 | 0.681 | 5e-85 | |
| 225470849 | 327 | PREDICTED: bifunctional dihydroflavonol | 0.931 | 0.660 | 0.700 | 5e-85 | |
| 225455496 | 324 | PREDICTED: dihydroflavonol-4-reductase [ | 0.913 | 0.654 | 0.718 | 2e-84 |
| >gi|225465329|ref|XP_002274632.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 1 [Vitis vinifera] gi|296085398|emb|CBI29130.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/217 (69%), Positives = 184/217 (84%), Gaps = 1/217 (0%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLF 63
+G+ KVVCVTGASG++ASWLVKLLLQRGYTVKATVRDPN PK TEHL L+GA ERLHLF
Sbjct: 2 DGQGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALEGAKERLHLF 61
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK 123
KANLLEEGSFDS VDGCDGVFHTASPV+ + D+PQA ++DPA+ GT++VL SCAKV S+K
Sbjct: 62 KANLLEEGSFDSVVDGCDGVFHTASPVVLIVDDPQAQLIDPALKGTMSVLGSCAKVPSVK 121
Query: 124 RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183
RVV+TSS+ ++ N P+ PDV++DE+WFS+PV C+++K WY L+KTLAEEAAWKFAKEN
Sbjct: 122 RVVVTSSMASVAFNGKPLAPDVLVDESWFSDPVFCEKSKLWYMLSKTLAEEAAWKFAKEN 181
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIY 220
GID+V I+PG VIGP QP LN E +L L+ G+I+
Sbjct: 182 GIDMVTINPGWVIGPLLQPTLNLSVEEVLKLLKGDIF 218
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487096|ref|XP_003633516.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Vitis vinifera] gi|296085371|emb|CBI29103.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 183/217 (84%), Gaps = 1/217 (0%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLF 63
+G+ KVVCVTGASG++ASWLVKLLLQRGYTVKATVRDPN PK TEHL L+GA ERLHLF
Sbjct: 2 DGQGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALEGAKERLHLF 61
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK 123
KANLLEEGSFDS VDGCDGVFHTASPV+ + D+PQA ++DPA+ GT++VL SCAKV S+K
Sbjct: 62 KANLLEEGSFDSVVDGCDGVFHTASPVVLIVDDPQAQLIDPALKGTMSVLGSCAKVPSVK 121
Query: 124 RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183
RVV+TSS+ ++ N P+ PDV++DE+WFS+PV C+++K WY L+KTLAEEAAWKFAKEN
Sbjct: 122 RVVVTSSMASVAFNGKPLAPDVLVDESWFSDPVFCEKSKLWYMLSKTLAEEAAWKFAKEN 181
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIY 220
GID+V I+PG VIGP QP LN E +L L+ G+ +
Sbjct: 182 GIDMVTINPGWVIGPLLQPTLNLSVEEVLKLLKGDTF 218
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736314|emb|CBI24952.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/215 (72%), Positives = 180/215 (83%), Gaps = 1/215 (0%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLFK 64
GE KVVCVTGASGF+ASWLVKLLLQ YTVKATVRDPN PK T+HL LDGA ERLHLFK
Sbjct: 4 GEGKVVCVTGASGFIASWLVKLLLQHDYTVKATVRDPNDPKKTQHLLSLDGAKERLHLFK 63
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
A+LLEEGSFDS VDGCDGVFHTASPV NPQA+++DPA+ GT+NVLRSCAK S+KR
Sbjct: 64 ADLLEEGSFDSVVDGCDGVFHTASPVAMDVVNPQAELIDPALKGTINVLRSCAKFPSVKR 123
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
VV+TSS+ A++ P+T +V+IDE+WFS+PVLCKE+K WY L+KTLAEEAAWKF+KENG
Sbjct: 124 VVVTSSMAAVVFTGKPLTSEVLIDESWFSDPVLCKESKLWYVLSKTLAEEAAWKFSKENG 183
Query: 185 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNI 219
ID+V I+P VIGP QP LN AEV+LNLIN +
Sbjct: 184 IDMVTINPAWVIGPLIQPTLNLSAEVVLNLINDTL 218
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224106117|ref|XP_002314050.1| cinnamoyl CoA reductase-like protein [Populus trichocarpa] gi|222850458|gb|EEE88005.1| cinnamoyl CoA reductase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/218 (70%), Positives = 178/218 (81%), Gaps = 2/218 (0%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERL 60
MS G+ KVVCVTG SG++ASWLVKLLLQRGYTVK TVRDPN PK TEHL L+GA ERL
Sbjct: 17 MSRGGDGKVVCVTGGSGYIASWLVKLLLQRGYTVKTTVRDPNDPKKTEHLLALEGAKERL 76
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFL-SDNPQADIVDPAVMGTLNVLRSCAKV 119
HLFKANLLEEG+FD VDGC+GVFHTASPV F +D+PQ D++DPA+ GTLNVLRSCAKV
Sbjct: 77 HLFKANLLEEGAFDPIVDGCEGVFHTASPVSFSPTDDPQVDLIDPALKGTLNVLRSCAKV 136
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
HSI+RVVLTSS A + + P+ DVVIDETW+S+P +CKE K WY+L+KTLAEEAAW F
Sbjct: 137 HSIRRVVLTSSAAACIYSGKPLNHDVVIDETWYSDPAICKELKAWYALSKTLAEEAAWNF 196
Query: 180 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
AKEN DLV +HP VIGP QP LN E+IL+L+NG
Sbjct: 197 AKENATDLVTVHPSFVIGPLLQPTLNLSVEMILDLVNG 234
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487083|ref|XP_003633515.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Vitis vinifera] gi|296085368|emb|CBI29100.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 184/220 (83%), Gaps = 3/220 (1%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERL 60
MSG+G KVVCVTGASG++ASWLVKLLLQRGYTVKATVRDPN PK TEHL L+GA ERL
Sbjct: 1 MSGQG--KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALEGAKERL 58
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
HLF+ANLLEEGSFDS VDGCDGVFHTASPV+ + D+PQA ++DPA+ GT+NVL SCAKV
Sbjct: 59 HLFEANLLEEGSFDSVVDGCDGVFHTASPVVMIVDDPQAQLIDPALKGTMNVLGSCAKVP 118
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
S+KRVV+TSS+ ++ N + PDV++DE+WFS+PV C+++K WY L+KTLAEEAAWKFA
Sbjct: 119 SVKRVVVTSSMASVAFNGKHLAPDVLVDESWFSDPVFCEKSKLWYMLSKTLAEEAAWKFA 178
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIY 220
KENGID+V I+PG VIGP QP LN E +L L+ G+ +
Sbjct: 179 KENGIDMVTINPGWVIGPLLQPTLNLSVEEVLKLLKGDTF 218
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470851|ref|XP_002268122.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205080|emb|CBI40601.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/218 (70%), Positives = 182/218 (83%), Gaps = 3/218 (1%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATER 59
M +GEG KVVCVTGA+GFVASWLVKLLLQRGYTV+ATVRDPN PK TEHL LDGA ER
Sbjct: 1 MSTGEG--KVVCVTGAAGFVASWLVKLLLQRGYTVRATVRDPNDPKKTEHLLSLDGAKER 58
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
L LFKA+LLEEGSFD VDGCDGVFHTASPV+ +PQ +++DPA+ GT+NVLRSC+KV
Sbjct: 59 LRLFKADLLEEGSFDPVVDGCDGVFHTASPVVMQVTDPQTELIDPALKGTINVLRSCSKV 118
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
S+KRVV+TSS+ A+ N P+TP+V+IDE+WFS+ VLCKE+K WY L+KTLAEEAAWKF
Sbjct: 119 PSVKRVVVTSSMSAVEQNGKPLTPEVIIDESWFSDAVLCKESKLWYKLSKTLAEEAAWKF 178
Query: 180 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
+KENGID+V I+PG V+GP QP LN E IL L+NG
Sbjct: 179 SKENGIDMVMINPGWVLGPLLQPTLNLSVEEILKLLNG 216
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470855|ref|XP_002268322.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205076|emb|CBI40597.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/218 (70%), Positives = 182/218 (83%), Gaps = 3/218 (1%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATER 59
M +GEG KVVCVTGA+GFVASWLVKLLLQRGYTV+ATVRDPN PK TEHL LDGA ER
Sbjct: 1 MSTGEG--KVVCVTGAAGFVASWLVKLLLQRGYTVRATVRDPNDPKKTEHLLSLDGAKER 58
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
L LFKA+LLEEGSFD VDGCDGVFHTASPV+ +PQ +++DPA+ GT+NVLRSC+KV
Sbjct: 59 LRLFKADLLEEGSFDPVVDGCDGVFHTASPVVMQVTDPQTELIDPALKGTINVLRSCSKV 118
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
S+KRVV+TSS+ A+ N P+TP+V+IDE+WFS+ VLCKE+K WY L+KTLAEEAAWKF
Sbjct: 119 PSVKRVVVTSSMSAVEQNGKPLTPEVIIDESWFSDAVLCKESKLWYKLSKTLAEEAAWKF 178
Query: 180 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
+KENGID+V I+PG V+GP QP LN E IL L+NG
Sbjct: 179 SKENGIDMVMINPGWVLGPLLQPTLNLSVEEILKLLNG 216
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147777135|emb|CAN63402.1| hypothetical protein VITISV_030427 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/229 (68%), Positives = 184/229 (80%), Gaps = 15/229 (6%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERL 60
MSGEG KVV VTGASGF+ASWLVKLLLQ YTVKATVRDPN PK T+HL LDGA ERL
Sbjct: 1 MSGEG--KVVSVTGASGFIASWLVKLLLQHRYTVKATVRDPNDPKKTQHLLSLDGAQERL 58
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ------------ADIVDPAVMG 108
HLFKA+LLE GSFDS VDGCDGVFHTASPV + NPQ A+++DPA+ G
Sbjct: 59 HLFKADLLEXGSFDSVVDGCDGVFHTASPVALEAINPQLTSISLFFFRVRAELIDPALKG 118
Query: 109 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168
T+NVLRSC+KV S+KRVV+TSS+ ++L P+TP+V+IDE+WFS+PV+CKE+K+WY L+
Sbjct: 119 TINVLRSCSKVPSVKRVVVTSSLASVLFTGEPLTPEVLIDESWFSDPVICKESKQWYVLS 178
Query: 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
KTLAEEAAWKF+KENGID+V I+PG IGP QP LN AE +LNLING
Sbjct: 179 KTLAEEAAWKFSKENGIDMVTINPGWXIGPLLQPTLNLSAEQVLNLING 227
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470849|ref|XP_002267167.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205084|emb|CBI40605.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/217 (70%), Positives = 181/217 (83%), Gaps = 1/217 (0%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERL 60
MS EKVVCVTGA+GF+ASWLVKLLL RGYTVKAT+R+P+ P KT+HL L+GA ERL
Sbjct: 1 MSEAVAEKVVCVTGAAGFIASWLVKLLLLRGYTVKATLRNPDDPTKTQHLLALEGAKERL 60
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
HLFKA+LLEEGSFDS V+GC+GVFHTASPV+ NP+ +++DPAV GTLNVLRSC KV
Sbjct: 61 HLFKADLLEEGSFDSIVEGCEGVFHTASPVLLEVANPKVELIDPAVNGTLNVLRSCTKVP 120
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
SI+RVV+TSSI A + N +TPDV++DETWFS+P C+E+K WY L+KTLAEEAAWKFA
Sbjct: 121 SIRRVVVTSSIVATIFNGKTLTPDVIVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFA 180
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
KENGIDLV ++PG VIGPF QP +N E+ILNLING
Sbjct: 181 KENGIDLVTMNPGFVIGPFLQPTINLTMEIILNLING 217
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455496|ref|XP_002263014.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296086795|emb|CBI32944.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/213 (71%), Positives = 175/213 (82%), Gaps = 1/213 (0%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFK 64
G EKVVCVTGASG++ASWLVKLLLQRGYTV A+VRDP+ P KTEHL LDGA ERLHLFK
Sbjct: 3 GAEKVVCVTGASGYIASWLVKLLLQRGYTVNASVRDPDDPTKTEHLLALDGAKERLHLFK 62
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
ANLLEEG+FDS VDGC+GVFHTASP NPQ +++DPAV GTLNVLRSCAKV SI+R
Sbjct: 63 ANLLEEGAFDSMVDGCEGVFHTASPFYHTVSNPQVELIDPAVKGTLNVLRSCAKVPSIRR 122
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
VV+TSS+ A+ +TPDVV+DETWFS+P +C++ K WY L+KTLAEEAAWKFAKEN
Sbjct: 123 VVVTSSMAAVAFTGQTLTPDVVVDETWFSDPAVCEKLKLWYMLSKTLAEEAAWKFAKENK 182
Query: 185 IDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
IDLVAI+PG VIGP QP LN E +L LING
Sbjct: 183 IDLVAINPGLVIGPLLQPTLNTSVEPVLKLING 215
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 232 | ||||||
| TAIR|locus:2150315 | 326 | AT5G19440 [Arabidopsis thalian | 0.931 | 0.662 | 0.672 | 1.1e-76 | |
| TAIR|locus:2033904 | 325 | AT1G51410 [Arabidopsis thalian | 0.926 | 0.661 | 0.663 | 1.9e-74 | |
| TAIR|locus:2012265 | 322 | AT1G09490 [Arabidopsis thalian | 0.900 | 0.649 | 0.628 | 2.9e-71 | |
| TAIR|locus:2012250 | 369 | AT1G09480 [Arabidopsis thalian | 0.926 | 0.582 | 0.596 | 3.8e-69 | |
| TAIR|locus:2012315 | 322 | AT1G09510 [Arabidopsis thalian | 0.900 | 0.649 | 0.619 | 1.7e-68 | |
| TAIR|locus:2012280 | 325 | AT1G09500 [Arabidopsis thalian | 0.900 | 0.643 | 0.616 | 2.7e-68 | |
| TAIR|locus:2033394 | 319 | AT1G66800 [Arabidopsis thalian | 0.956 | 0.695 | 0.606 | 2.7e-68 | |
| TAIR|locus:2122093 | 326 | DRL1 "dihydroflavonol 4-reduct | 0.887 | 0.631 | 0.557 | 1.1e-55 | |
| TAIR|locus:2200427 | 344 | CCR1 "cinnamoyl coa reductase | 0.879 | 0.593 | 0.5 | 1.5e-51 | |
| TAIR|locus:2025832 | 332 | CCR2 "cinnamoyl coa reductase" | 0.879 | 0.614 | 0.490 | 4.1e-49 |
| TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 146/217 (67%), Positives = 174/217 (80%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERL 60
M+ GE KVVCVTGASG++ASWLVK LL RGYTVKA+VRDP+ PK T+HL L+GA ERL
Sbjct: 1 MANSGEGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERL 60
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
HLFKA+LLE+GSFDSA+DGC GVFHTASP + +PQA+++DPAV GTLNVL SCAK
Sbjct: 61 HLFKADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKAS 120
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
S+KRVV+TSS+ A+ N P TPDV +DETWFS+P LC+ +K WY L+KTLAE+AAWK A
Sbjct: 121 SVKRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLA 180
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
KE G+D+V I+P VIGP QP LN A ILNLING
Sbjct: 181 KEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING 217
|
|
| TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 144/217 (66%), Positives = 171/217 (78%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERL 60
MS E EEK VCVTGASG++ASW+VKLLL RGYTVKA+VRDPN P KTEHL L+GA ERL
Sbjct: 1 MSSE-EEKTVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEHLLALEGAEERL 59
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
LFKANLLEEGSFDSA+DGC+GVFHTASP +PQA+++DPAV GT+NVL SC K
Sbjct: 60 KLFKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDPAVKGTINVLSSCLKTS 119
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
S+KRVVLTSSI A+ N P TP+ ++DETWF++P C+ +K WY L+KTLAE AAWKFA
Sbjct: 120 SVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLWYVLSKTLAENAAWKFA 179
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
KEN + LV+I+P VIGP QP LN A +L+LI G
Sbjct: 180 KENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKG 216
|
|
| TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 132/210 (62%), Positives = 168/210 (80%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANL 67
KVVCVTGASG++ASW+VKLLL RGYTV ATVRDP + KTEHL LDGA ERL LFKA+L
Sbjct: 6 KVVCVTGASGYIASWIVKLLLLRGYTVNATVRDPKDKKKTEHLLALDGAKERLKLFKADL 65
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
LEE SFD A+DGCD VFHTASPV+F +PQ +++DPA+ GT+NVL +C +V S+KRV+L
Sbjct: 66 LEESSFDQAIDGCDAVFHTASPVLFTVTDPQTELIDPALKGTINVLNTCKQVSSVKRVIL 125
Query: 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 187
TSS A+L + P+ P+ ++DET+FS+P LC+E K WYSL+K LAE AAW+FAK+NGID+
Sbjct: 126 TSSTAAVLSRQPPIGPNDLVDETFFSDPSLCRETKNWYSLSKILAENAAWQFAKDNGIDM 185
Query: 188 VAIHPGTVIGPFFQPILNFGAEVILNLING 217
V ++PG + GP QP LN E+I++ ING
Sbjct: 186 VVLNPGFICGPLLQPTLNMSVELIVDFING 215
|
|
| TAIR|locus:2012250 AT1G09480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 130/218 (59%), Positives = 169/218 (77%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD-PNSPKTEHLRELDGATER 59
+M+G G K+VCVTGASG++ASW+VKLLL RGYTVKATVRD + KTEHL LDGA ER
Sbjct: 47 IMNGGG--KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKER 104
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
L LFKA+LLEE SF+ A++GCD VFHTASPV F +PQ +++DPA+ GT+NVL +C +
Sbjct: 105 LKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTMNVLNTCKET 164
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
S++RV+LTSS A+L + P+ V+DET+FS+P LC+E K WY L+K LAE AAW+F
Sbjct: 165 PSVRRVILTSSTAAVLFRQPPVEASDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEF 224
Query: 180 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
AK+NGID+V ++PG + GP QP LNF E+I++ ING
Sbjct: 225 AKDNGIDMVVLNPGFIFGPLLQPTLNFSVELIVDFING 262
|
|
| TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/210 (61%), Positives = 166/210 (79%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLFKANL 67
K+VCVTGASG+VASW+VKLLL RGYTV+ATVRDP+ K TEHL LDGA E+L LFKA+L
Sbjct: 6 KMVCVTGASGYVASWIVKLLLLRGYTVRATVRDPSDEKKTEHLLALDGAKEKLKLFKADL 65
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
LEEGSF+ A++GCD VFHTASPV +PQ +++DPAV GTLNVL++CAKV S+KRV++
Sbjct: 66 LEEGSFEQAIEGCDAVFHTASPVSLTVTDPQIELIDPAVKGTLNVLKTCAKVSSVKRVIV 125
Query: 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 187
TSS+ A+L E + P+ ++DE+ FS+P C E K WY+L+KTLAE+ AW+FAKE G+DL
Sbjct: 126 TSSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLWYALSKTLAEDEAWRFAKEKGLDL 185
Query: 188 VAIHPGTVIGPFFQPILNFGAEVILNLING 217
V I+PG V+GP +P L F VI+ LI G
Sbjct: 186 VVINPGLVLGPLLKPSLTFSVNVIVELITG 215
|
|
| TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 130/211 (61%), Positives = 168/211 (79%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGATERLHLFKANL 67
KVVCVTGASG++ASW+VKLLL RGYT+ ATVRDP KT+HL LDGA ERL LFKA+L
Sbjct: 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65
Query: 68 LEEGSFDSAVDGCDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
L+EGSF+ A+DGC+ VFHTASPV I + +PQ ++++PAV GT+NVLR+C KV S+KRV+
Sbjct: 66 LDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVI 125
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
LTSS+ A+L ET + P+ V+DET+F+NP +E K+WY L+KTLAE+AAW+FAK+N ID
Sbjct: 126 LTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEID 185
Query: 187 LVAIHPGTVIGPFFQPILNFGAEVILNLING 217
L+ ++PG V GP QP LNF VI+ L+ G
Sbjct: 186 LIVLNPGLVTGPILQPTLNFSVAVIVELMKG 216
|
|
| TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 139/229 (60%), Positives = 175/229 (76%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERL 60
M+GEG KVVCVTGASG++ASW+VKLLL RGYTV+ATVR+P ++ KT HL L+GA+ERL
Sbjct: 1 MNGEG--KVVCVTGASGYIASWIVKLLLLRGYTVRATVRNPMDTKKTNHLLTLEGASERL 58
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
LFK++LLEEGSFD A++GCDGVFHTASPV +PQ +++DPAV GTLNVLR+CAKV
Sbjct: 59 KLFKSDLLEEGSFDQAIEGCDGVFHTASPVSLTVTDPQTEMIDPAVNGTLNVLRTCAKVS 118
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
S+KRV++TSS A L + P+ V+DET F++ + K WY +KTLAEE AW+FA
Sbjct: 119 SVKRVIVTSSTAATL----SINPNDVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFA 174
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIM 229
KENGIDLV ++PG VIGP QP LN+ EVI++LING S + R M
Sbjct: 175 KENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYRFM 223
|
|
| TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 116/208 (55%), Positives = 150/208 (72%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGASGF+ASWLVK LL GY V TVRDP N K HL +L+GA ERL L KA+L+E
Sbjct: 8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLME 67
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
EGSFD+A+ GC GVFHTASPV+ + NP+ +I+ PA+ GTLNVLRSC K S+KRVVLTS
Sbjct: 68 EGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTS 127
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
S + + + P + +DE+ +++ LCK + WY+L+KTLAE+AAWKF++ENGIDLV
Sbjct: 128 SSSTVRIRDD-FDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLVT 186
Query: 190 IHPGTVIGPFFQPILNFGAEVILNLING 217
+ P ++GP P L A +L L+ G
Sbjct: 187 VLPSFLVGPSLPPDLCSTASDVLGLLKG 214
|
|
| TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 105/210 (50%), Positives = 147/210 (70%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K VCVTGA G++ASW+VK+LL+RGYTVK TVR+P+ PK HLREL+G ERL L KA+L
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + +A+DGCDGVFHTASPV +D+P+ +V+PAV G V+ + A+ +KRVV+T
Sbjct: 71 DYEALKAAIDGCDGVFHTASPV---TDDPE-QMVEPAVNGAKFVINAAAEA-KVKRVVIT 125
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SSIGA+ ++ P+ V+DE+ +S+ CK K WY K +AE+AAW+ AKE G+DLV
Sbjct: 126 SSIGAVYMDPN-RDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLV 184
Query: 189 AIHPGTVIGPFFQPILNFGAEVILNLINGN 218
++P V+GP QP +N +L + G+
Sbjct: 185 VLNPVLVLGPPLQPTINASLYHVLKYLTGS 214
|
|
| TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 103/210 (49%), Positives = 141/210 (67%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K+VCVTGA G++ASW+VKLLL+RGYTV+ TVR+P PK HLREL GA ERL L A+LL
Sbjct: 6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLHSADLL 65
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + + +DGCDGVFHTASP ++D+P+ +++PAV G V+ + AK +KRVV T
Sbjct: 66 DYEALCATIDGCDGVFHTASP---MTDDPET-MLEPAVNGAKFVIDAAAKA-KVKRVVFT 120
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SSIGA+ +N T ++DE +S+ CK K WY K LAE++AW+ AK G+DLV
Sbjct: 121 SSIGAVYMNPNRDT-QAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLV 179
Query: 189 AIHPGTVIGPFFQPILNFGAEVILNLINGN 218
++P V+GP Q +N IL + G+
Sbjct: 180 VLNPVLVLGPPLQSAINASLVHILKYLTGS 209
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 232 | |||
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 1e-147 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 1e-118 | |
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 2e-99 | |
| PLN02989 | 325 | PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase | 7e-94 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 7e-70 | |
| PLN02214 | 342 | PLN02214, PLN02214, cinnamoyl-CoA reductase | 1e-67 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 2e-66 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 2e-66 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 7e-65 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 8e-61 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 6e-45 | |
| PLN02686 | 367 | PLN02686, PLN02686, cinnamoyl-CoA reductase | 2e-37 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-36 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-29 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 3e-27 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-22 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-21 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-20 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 3e-17 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 4e-17 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 4e-16 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 5e-16 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 6e-14 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 8e-14 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 1e-13 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 3e-13 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 4e-13 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 5e-13 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-11 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 1e-10 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 3e-10 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 3e-10 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 3e-10 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 7e-10 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 1e-09 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 3e-09 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 4e-09 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 5e-09 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 9e-09 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 2e-08 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 3e-08 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 4e-08 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 5e-08 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 7e-08 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 2e-07 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-07 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 4e-07 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 4e-07 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 5e-07 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 6e-07 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 7e-07 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 2e-06 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 3e-06 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 3e-06 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 4e-06 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 4e-06 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 5e-06 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 5e-06 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 5e-06 | |
| PLN02653 | 340 | PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | 6e-06 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 1e-05 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 1e-05 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-05 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 3e-05 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 3e-05 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 5e-05 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 5e-05 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 6e-05 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 7e-05 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 1e-04 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 2e-04 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 2e-04 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 2e-04 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 2e-04 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 2e-04 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 2e-04 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 3e-04 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 4e-04 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 4e-04 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 4e-04 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 4e-04 | |
| COG2910 | 211 | COG2910, COG2910, Putative NADH-flavin reductase [ | 4e-04 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 7e-04 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 8e-04 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 8e-04 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 0.001 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 0.001 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 0.001 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 0.002 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 0.004 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 0.004 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 411 bits (1059), Expect = e-147
Identities = 161/213 (75%), Positives = 180/213 (84%), Gaps = 1/213 (0%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFK 64
GE KVVCVTGASG++ASWLVKLLLQRGYTVKATVRDPN P KTEHL LDGA ERLHLFK
Sbjct: 2 GEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFK 61
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
ANLLEEGSFDS VDGC+GVFHTASP +PQA+++DPAV GTLNVLRSCAKV S+KR
Sbjct: 62 ANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKR 121
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
VV+TSS+ A+ N P+TPDVV+DETWFS+P C+E+K WY L+KTLAEEAAWKFAKENG
Sbjct: 122 VVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENG 181
Query: 185 IDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
ID+V I+P VIGP QP LN AE ILNLING
Sbjct: 182 IDMVTINPAMVIGPLLQPTLNTSAEAILNLING 214
|
Length = 322 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 338 bits (868), Expect = e-118
Identities = 126/209 (60%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGASGF+ SWLVK LLQRGYTV+ATVRDP + K HL EL+GA ERL LFKA+LL+
Sbjct: 1 VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLD 60
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
GSFD+A+DGCDGVFH ASPV F S++P+ ++++PAV GTLNVL +CAK S+KRVV TS
Sbjct: 61 YGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFTS 120
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
S+ A++ N V+DE+ +S+ CK+ K WY+L+KTLAE+AAW+FA+ENG+DLV
Sbjct: 121 SVAAVVWNPNR-GEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDLVT 179
Query: 190 IHPGTVIGPFFQPILNFGAEVILNLINGN 218
++P V+GPF QP LN +++IL+L+ GN
Sbjct: 180 VNPSLVVGPFLQPSLNSSSQLILSLLKGN 208
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 2e-99
Identities = 131/217 (60%), Positives = 169/217 (77%), Gaps = 3/217 (1%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERL 60
M+G G K+VCVTGASG++ASW+VKLLL RGYTVKATVRD + KTEHL LDGA ERL
Sbjct: 1 MNGGG--KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERL 58
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
LFKA+LLEE SF+ A++GCD VFHTASPV F +PQ +++DPA+ GT+NVL +C +
Sbjct: 59 KLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP 118
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
S+KRV+LTSS A+L + P+ + V+DET+FS+P LC+E K WY L+K LAE AAW+FA
Sbjct: 119 SVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFA 178
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
K+NGID+V ++PG + GP QP LNF E+I++ ING
Sbjct: 179 KDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFING 215
|
Length = 322 |
| >gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 7e-94
Identities = 130/211 (61%), Positives = 168/211 (79%), Gaps = 2/211 (0%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGATERLHLFKANL 67
KVVCVTGASG++ASW+VKLLL RGYT+ ATVRDP KT+HL LDGA ERL LFKA+L
Sbjct: 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65
Query: 68 LEEGSFDSAVDGCDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
L+EGSF+ A+DGC+ VFHTASPV I + +PQ ++++PAV GT+NVLR+C KV S+KRV+
Sbjct: 66 LDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVI 125
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
LTSS+ A+L ET + P+ V+DET+F+NP +E K+WY L+KTLAE+AAW+FAK+N ID
Sbjct: 126 LTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEID 185
Query: 187 LVAIHPGTVIGPFFQPILNFGAEVILNLING 217
L+ ++PG V GP QP LNF VI+ L+ G
Sbjct: 186 LIVLNPGLVTGPILQPTLNFSVAVIVELMKG 216
|
Length = 325 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 7e-70
Identities = 104/219 (47%), Positives = 146/219 (66%), Gaps = 7/219 (3%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHL 62
+++ VCVTGASGF+ SWLV LL+RGYTV+ATVRDP N K +HL +L GAT RL L
Sbjct: 1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTL 60
Query: 63 FKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI 122
+KA+L EGSFD A+ GC GVFH A+P+ F S +P+ +++ P V G L+++++CAK ++
Sbjct: 61 WKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTV 120
Query: 123 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK--EW-YSLAKTLAEEAAWKF 179
+R+V TSS G + + E V DE +S+ C+ K W Y ++KTLAE+AAWK+
Sbjct: 121 RRIVFTSSAGTVNVEEHQKP---VYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY 177
Query: 180 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
A ENG+D ++I P V+GPF + L+LI GN
Sbjct: 178 AAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN 216
|
Length = 351 |
| >gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 211 bits (537), Expect = 1e-67
Identities = 106/215 (49%), Positives = 149/215 (69%), Gaps = 6/215 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K VCVTGA G++ASW+VK+LL+RGYTVK TVR+P+ PK HLREL+G ERL L KA+L
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + +A+DGCDGVFHTASPV +D+P+ +V+PAV G V+ + A+ +KRVV+T
Sbjct: 71 DYEALKAAIDGCDGVFHTASPV---TDDPE-QMVEPAVNGAKFVINAAAEA-KVKRVVIT 125
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SSIGA+ ++ P+ V+DE+ +S+ CK K WY K +AE+AAW+ AKE G+DLV
Sbjct: 126 SSIGAVYMDPN-RDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLV 184
Query: 189 AIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAA 223
++P V+GP QP +N +L + G+ + A
Sbjct: 185 VLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA 219
|
Length = 342 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 2e-66
Identities = 99/213 (46%), Positives = 134/213 (62%), Gaps = 6/213 (2%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
V VTGASGFVAS +V+ LL+RGY V+ATVRDP K HL +LD RL L A+L +
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
E SFD + GC GVFH A+PV F S +P +++ PA+ GTLN L++ A S+KR VLTS
Sbjct: 61 EQSFDEVIKGCAGVFHVATPVSFSSKDPN-EVIKPAIGGTLNALKAAAAAKSVKRFVLTS 119
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE--W-YSLAKTLAEEAAWKFAKENGID 186
S G++L+ + P +V+DE ++ + K+ W Y+ +KTLAE+AAWKFA EN ID
Sbjct: 120 SAGSVLIPK-PNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENNID 178
Query: 187 LVAIHPGTVIGPFFQPILNFGAEVILNLINGNI 219
L+ + P IG F + ++LI GN
Sbjct: 179 LITVIPTLTIGTIFDSETPSSSGWAMSLITGNE 211
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 2e-66
Identities = 112/240 (46%), Positives = 146/240 (60%), Gaps = 34/240 (14%)
Query: 2 MSGEGEEK---VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE 58
M EG E CVTGA+G++ SWLVKLLLQRGYTV AT+RDP K+ HL +
Sbjct: 1 MELEGRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPA--KSLHLLSKWKEGD 58
Query: 59 RLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIF--------LSDNPQADIVDPAVMGTL 110
RL LF+A+L EEGSFD AV GCDGVFH A+ + F + + Q+ ++DPA+ GTL
Sbjct: 59 RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTL 118
Query: 111 NVLRSCAKVHSIKRVVLTSSIGAM-----------LLNETPMTPDVVIDETWFSNPVLCK 159
NVL+SC K ++KRVV TSSI + +++ET TP ID W +
Sbjct: 119 NVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTP---IDHVWNTKAS--- 172
Query: 160 ENKEW-YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
W Y L+K L EEAA+K+AKENGIDLV++ TV GPF P + +V+L+ I G+
Sbjct: 173 ---GWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGD 229
|
Length = 353 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 7e-65
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLL 68
+V VTGA+GF+AS +V+ LL+ GY V+ TVR S K + L + G +RL + L
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60
Query: 69 -EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
++D A+ G D V H ASP F + + D++DPAV GTLNVL + S+KRVVL
Sbjct: 61 TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVL 120
Query: 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-YSLAKTLAEEAAWKFAKEN--G 184
TSS+ A + + T P V E +++ + K N Y +KTLAE+AAW+F KEN
Sbjct: 121 TSSVAA-VGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKPK 179
Query: 185 IDLVAIHPGTVIGP-FFQPILNFGAEVILNLING 217
+L+ I+PG V+GP LN E+I L++G
Sbjct: 180 FELITINPGYVLGPSLLADELNSSNELINKLLDG 213
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 8e-61
Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 4/213 (1%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANL 67
K CV G +GF+AS L+KLLLQ+GY V TVRDP N K HLR L + L +F A+L
Sbjct: 10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGD-LKIFGADL 68
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
+E SF++ + GCD VFH A+PV F S++P+ D++ PA+ G NVL++CAK S+KRV+L
Sbjct: 69 TDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVIL 128
Query: 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK-EW-YSLAKTLAEEAAWKFAKENGI 185
TSS A+ +N+ T V+ ++ W L E W Y +KTLAE+AAWKFA+EN I
Sbjct: 129 TSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNI 188
Query: 186 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
DL+ + P + GP + + ++LI GN
Sbjct: 189 DLITVIPTLMAGPSLTSDIPSSLSLAMSLITGN 221
|
Length = 338 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 6e-45
Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 6/199 (3%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE-HLRELDGATERLH 61
S + K VCV ASG+V WLVK LL RGYTV A V+ + E +R L ERL
Sbjct: 1 SFDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLK 60
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQAD--IVDPAVMGTLNVLRSCAKV 119
+F + L+ S A+ GC G+F P SD P D +VD V NVL +CA+
Sbjct: 61 VFDVDPLDYHSILDALKGCSGLFCCFDPP---SDYPSYDEKMVDVEVRAAHNVLEACAQT 117
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
+I++VV TSS+ A++ + ++ +DE +S+ C++ K W++LAKTL+E+ AW
Sbjct: 118 DTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWAL 177
Query: 180 AKENGIDLVAIHPGTVIGP 198
A + G+++V+I+ G ++GP
Sbjct: 178 AMDRGVNMVSINAGLLMGP 196
|
Length = 297 |
| >gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 2e-37
Identities = 76/215 (35%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL--DGATERLH-- 61
E ++VCVTG F+ +V LL+ GY+V+ V E LRE+ G R +
Sbjct: 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQED--KEKLREMEMFGEMGRSNDG 108
Query: 62 --LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA-------VMGTL-- 110
ANL E S A DGC GVFHT++ VDPA M L
Sbjct: 109 IWTVMANLTEPESLHEAFDGCAGVFHTSA------------FVDPAGLSGYTKSMAELEA 156
Query: 111 ----NVLRSCAKVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEWY 165
NV+ +C + S+++ V TSS+ A + + P VIDE +S+ C++NK WY
Sbjct: 157 KASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWY 216
Query: 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200
+L K AE+AAW+ A+ G+ L I P V GP F
Sbjct: 217 ALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF 251
|
Length = 367 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 1e-36
Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+GF+ S LV+ LL +GY V+A VR LDG + + + +L + S
Sbjct: 3 VTGATGFLGSNLVRALLAQGYRVRALVRS-----GSDAVLLDG--LPVEVVEGDLTDAAS 55
Query: 73 FDSAVDGCDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131
+A+ GCD VFH A+ ++ D + + V GT NVL + + ++RVV TSSI
Sbjct: 56 LAAAMKGCDRVFHLAAFTSLWAKDRKELYRTN--VEGTRNVLDAALE-AGVRRVVHTSSI 112
Query: 132 GAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIH 191
A+ PD IDET N + Y +K LAE + A E G+D+V ++
Sbjct: 113 AAL-----GGPPDGRIDETTPWNE---RPFPNDYYRSKLLAELEVLEAAAE-GLDVVIVN 163
Query: 192 PGTVIGP 198
P V GP
Sbjct: 164 PSAVFGP 170
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-29
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTG +GF+ S LV+ LL G+ V+ R + LD + +L +
Sbjct: 5 VTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG--------LDPLLSGVEFVVLDLTDRDL 56
Query: 73 FDSAVDGC-DGVFHTA--SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
D G D V H A S V + + A+ +D V GTLN+L + +KR V S
Sbjct: 57 VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFAS 115
Query: 130 SIGAMLLNETPMTPDVVIDETWF-SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
S+ + P + IDE P+ Y ++K AE+ +A+ G+ +V
Sbjct: 116 SVSVVY----GDPPPLPIDEDLGPPRPL------NPYGVSKLAAEQLLRAYARLYGLPVV 165
Query: 189 AIHPGTVIGPFFQPILNFGAEVILNLING--------NIYSAAIQDRIMIY 231
+ P V GP +P + + V+ I I Q R +Y
Sbjct: 166 ILRPFNVYGPGDKP--DLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY 214
|
Length = 314 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-27
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
V VTGA+GFV S +V+LLL++G V+ VR P S + +L LD + + +L
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-PTSDR-RNLEGLDV-----EIVEGDLR 53
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ S AV GC +FH A+ + +P+ + V GT N+LR+ + ++RVV T
Sbjct: 54 DPASLRKAVAGCRALFHVAADYRLWAPDPEE-MYAANVEGTRNLLRAALEA-GVERVVYT 111
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SS+ + + DET P + Y +K LAE+AA + A E G+ +V
Sbjct: 112 SSVATLGVRGDG----TPADET---TPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVV 164
Query: 189 AIHPGTVIGPF 199
++P T IGP
Sbjct: 165 IVNPSTPIGPR 175
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 1e-22
Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTGA GF+ S L + LL+ G+ V+A NS + L + +R H ++ +
Sbjct: 2 VLVTGADGFIGSHLTERLLREGHEVRALD-IYNSFNSWGLLDNAV-HDRFHFISGDVRDA 59
Query: 71 GSFDSAVDGCDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
+ V CD VFH A+ + I S V+ V GTLNVL + A V KRVV TS
Sbjct: 60 SEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEA-ACVLYRKRVVHTS 118
Query: 130 SIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEW-YSLAKTLAEEAAWKFAKENGIDL 187
+ +E DV IDE +P+L YS +K A+ A+ + + G+ +
Sbjct: 119 T------SEVYGTAQDVPIDE---DHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPV 169
Query: 188 VAIHPGTVIGP 198
I P GP
Sbjct: 170 TIIRPFNTYGP 180
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 1e-21
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 25/209 (11%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV+ LLQ GY V R S T R+ + +L +
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSE--------SLNTGRIRFHEGDLTDP 52
Query: 71 GSFDSAVDGC--DGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
+ + + D V H A+ + S AD + V+GTL +L + + +KR V
Sbjct: 53 DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARR-AGVKRFVF 111
Query: 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 187
SS + D I E P+ Y+ AK AE +A+ G+
Sbjct: 112 ASS-SEVY----GDVADPPITEDTPLGPL------SPYAAAKLAAERLVEAYARAYGLRA 160
Query: 188 VAIHPGTVIGPFFQPILNFGAEVILNLIN 216
V + V GP F VI LI
Sbjct: 161 VILRLFNVYGPG--NPDPFVTHVIPALIR 187
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 2e-20
Identities = 48/197 (24%), Positives = 72/197 (36%), Gaps = 54/197 (27%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV+ LL+RG+ V R
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDRL----------------------------- 31
Query: 71 GSFDSAVDGCDGVFHTASP--VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
D V H A+ V DNP D + V+GTLN+L + K +KR V
Sbjct: 32 ----------DVVVHLAALVGVPASWDNPDEDF-ETNVVGTLNLLEAARK-AGVKRFVYA 79
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SS + +E P+ Y ++K AE + + G+ +V
Sbjct: 80 SSASV-----YGSPEGLPEEEETPPRPLSP------YGVSKLAAEHLLRSYGESYGLPVV 128
Query: 189 AIHPGTVIGPFFQPILN 205
+ V GP +P L+
Sbjct: 129 ILRLANVYGPGQRPRLD 145
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 3e-17
Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVR--DPNSPKTEHLRELDGATERLHLFKANLL 68
V VTG SGF LVK LL+RG VR D P + K ++
Sbjct: 2 VLVTGGSGFFGERLVKQLLERG---GTYVRSFDIAPPGEALSAW---QHPNIEFLKGDIT 55
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + A+ G D VFHTA+ V V+ V GT NVL +C + +++ V T
Sbjct: 56 DRNDVEQALSGADCVFHTAAIVPLAGPRDLYWEVN--VGGTQNVLDACQRC-GVQKFVYT 112
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SS + + DET P + + Y+ K +AE + + +
Sbjct: 113 SSSSVIFGGQNIHNG----DETL---PYP-PLDSDMYAETKAIAEIIVLEANGRDDLLTC 164
Query: 189 AIHPGTVIGP---FFQPIL 204
A+ P + GP PIL
Sbjct: 165 ALRPAGIFGPGDQGLVPIL 183
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 4e-17
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 21/193 (10%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANL---- 67
VTG +GF+ LVK LL+ G+ V VR + + E G +R+ + + +L
Sbjct: 3 VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62
Query: 68 --LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
L + D V H A+ F + N A + GT +VL A++ I+R
Sbjct: 63 LGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRT--NIDGTEHVLELAARLD-IQRF 119
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 185
S+ + I ET + + K Y +K AE+ A + I
Sbjct: 120 HYVSTAY------VAGNREGNIRETELNPG---QNFKNPYEQSKAEAEQLVRAAATQ--I 168
Query: 186 DLVAIHPGTVIGP 198
L P V+G
Sbjct: 169 PLTVYRPSIVVGD 181
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 4e-16
Identities = 56/192 (29%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
V VTGA+GF+ LV LL RG V+ VR+ N+ + L EL
Sbjct: 2 VLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDID------------ 49
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSD---NPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
SF G D V H A+ V ++D +P +D T + R+ A +KR V
Sbjct: 50 --SFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARA-AARQGVKRFV 106
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
SS+ T P DET P + Y +K AE A + +G++
Sbjct: 107 FLSSVKVN-GEGTVGAP---FDETDPPAPQ------DAYGRSKLEAERALLELGASDGME 156
Query: 187 LVAIHPGTVIGP 198
+V + P V GP
Sbjct: 157 VVILRPPMVYGP 168
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 5e-16
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V V GA+G V +V+ LL RGY V+A VRDP +L+ A + +L +
Sbjct: 2 VLVVGATGKVGRHVVRELLDRGYQVRALVRDP-----SQAEKLEAAG--AEVVVGDLTDA 54
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
S +A++G D V A P+ + VD G +N++ AK +KR VL SS
Sbjct: 55 ESLAAALEGIDAVISAAG--SGGKGGPRTEAVD--YDGNINLID-AAKKAGVKRFVLVSS 109
Query: 131 IGA 133
IGA
Sbjct: 110 IGA 112
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 6e-14
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTG +GF+ S LV+ LL+RG+ V V D S T L + + ++ ++
Sbjct: 2 VLVTGGAGFIGSHLVERLLERGHEV--IVLDNLS--TGKKENLPEVKPNVKFIEGDIRDD 57
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLRSCAKVHSIKR 124
+ A +G D VFH A+ + P++ I DP V+GTLN+L + K +KR
Sbjct: 58 ELVEFAFEGVDYVFHQAA----QASVPRS-IEDPIKDHEVNVLGTLNLLEAARKAG-VKR 111
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
V SS ++ + + P DE NP+ Y+++K E FA+ G
Sbjct: 112 FVYASS-SSVYGDPPYL-P---KDEDHPPNPL------SPYAVSKYAGELYCQVFARLYG 160
Query: 185 IDLVAIHPGTVIGP 198
+ V++ V GP
Sbjct: 161 LPTVSLRYFNVYGP 174
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 8e-14
Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 13 VTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
VTG GF+ +V+LLL+ G V+ + E +L T + ++ ++
Sbjct: 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVIT----YIEGDVTDK 57
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
A+ G D V HTA+ + + I+ V GT NVL +C K ++ +V TSS
Sbjct: 58 QDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVK-AGVRVLVYTSS 116
Query: 131 IGAMLLNETPMTPDVVI--DETW--FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
+ + N ++ DET S Y +K LAE+ K NG
Sbjct: 117 MEVVGPN---SYGQPIVNGDETTPYESTHQDP------YPESKALAEKLV---LKANGST 164
Query: 187 L--------VAIHPGTVIGPFFQPILNFGAEVILNLINGNIY 220
L A+ P + G + F ++ L NG
Sbjct: 165 LKNGGRLYTCALRPAGIFGEGDPFLFPF---LVRLLKNGLAK 203
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 1e-13
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ VTGA GF+ S L + L G+ V+ D SP EH+ + E HL +L
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAEGHYVRGA--DWKSP--EHMTQPTDDDE-FHL--VDLR 53
Query: 69 EEGSFDSAVDGCDGVFHTASPV---IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
E + A +G D VFH A+ + ++ N A I+ + N+L + A+++ ++R
Sbjct: 54 EMENCLKATEGVDHVFHLAADMGGMGYIQSNH-AVIMYNNTLINFNMLEA-ARINGVERF 111
Query: 126 VLTSS--IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183
+ SS + + ++ W + P ++ Y K E + ++
Sbjct: 112 LFASSACVYPEFKQLETTVVRLREEDAWPAEP------QDAYGWEKLATERLCQHYNEDY 165
Query: 184 GIDLVAIHPGTVIGPF 199
GI+ + + GP
Sbjct: 166 GIETRIVRFHNIYGPR 181
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 3e-13
Identities = 43/197 (21%), Positives = 69/197 (35%), Gaps = 58/197 (29%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
V GA+G LVK LL RG+ V A R+P+ + + +L +
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSRNPSK----------APAPGVTPVQKDLFDLAD 52
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132
A+ G D V SD G ++L + A+ ++R+V+ S+ G
Sbjct: 53 LAEALAGVDAVVDAFGARPDDSD------------GVKHLLDAAAR-AGVRRIVVVSAAG 99
Query: 133 A-------MLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 185
L++ P+ P Y+ AK AEE + +G+
Sbjct: 100 LYRDEPGTFRLDDAPLFPP--------------------YARAKAAAEEL----LRASGL 135
Query: 186 DLVAIHPGTVIGPFFQP 202
D + P G F
Sbjct: 136 DWTIVRP----GALFDE 148
|
Length = 182 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 4e-13
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLE 69
V VTGA GF+ S LV+ L+++GY V+A V + L +++ + ++ +
Sbjct: 1 VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60
Query: 70 EGSFDSAVDGCDGVFHTAS----PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
S A+ GCD VFH A+ P +++ P + VD V GTLNVL++ + +++V
Sbjct: 61 PDSVRKAMKGCDVVFHLAALIAIPYSYIA--PDS-YVDTNVTGTLNVLQAARDL-GVEKV 116
Query: 126 VLTSS 130
V TS+
Sbjct: 117 VHTST 121
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 5e-13
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 32/188 (17%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
+ GA+G S +V+ L RG+ V A VRDP EH E+L + + ++L+
Sbjct: 4 IIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEH--------EKLKVVQGDVLDLED 55
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVM--GTLNVLRSCAKVHSIKRVVLTSS 130
A++G D V + D+ + GT N++ S K +KR+++
Sbjct: 56 VKEALEGQDAVI-----SAL---GTRNDLSPTTLHSEGTRNIV-SAMKAAGVKRLIVVGG 106
Query: 131 IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAI 190
G + +V+D F +A+ A K +E+G+D A+
Sbjct: 107 AG---SLDDRPKVTLVLDTLLF--------PPALRRVAEDHARML--KVLRESGLDWTAV 153
Query: 191 HPGTVIGP 198
P +
Sbjct: 154 RPPALFDG 161
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 1e-11
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GA+GF+ L + LL++G+ V VR+ E E + + + +L +
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQ-------EPVAVVEGDLRDL 53
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
S AV G D V H A D + D+ GT NVL AK +K + SS
Sbjct: 54 DSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVE-----GTRNVL-EAAKEAGVKHFIFISS 107
Query: 131 IGAM 134
+GA
Sbjct: 108 LGAY 111
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-10
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 22/192 (11%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V G SGF+ LV+ LL+RG TV + T L ++ R+ +L +
Sbjct: 2 CLVVGGSGFLGRHLVEQLLRRG---NPTVHVFDIRPTFELDP--SSSGRVQFHTGDLTDP 56
Query: 71 GSFDSAVD--GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ A + G + VFHTASP +D+ V+ V GT NV+ +C K +K++V T
Sbjct: 57 QDLEKAFNEKGPNVVFHTASPDHGSNDDLY-YKVN--VQGTRNVIEACRKC-GVKKLVYT 112
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK--ENGID 186
SS + N + + DE+ P K + Y+ K LAE+ K A E+G+
Sbjct: 113 SSASVV-FNGQDI---INGDESL---PYPDKHQ-DAYNETKALAEKLVLK-ANDPESGLL 163
Query: 187 LVAIHPGTVIGP 198
A+ P + GP
Sbjct: 164 TCALRPAGIFGP 175
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 3e-10
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 13 VTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG 71
V GA+G +V+ LL+ G+ V+A RDP+SP + L A + + + +L +
Sbjct: 3 VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKAL-----AAPGVEVVQGDLDDPE 57
Query: 72 SFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
S ++A+ G GVF ++D +A D G NV+ + + ++ V +S
Sbjct: 58 SLEAALKGVYGVFL-------VTDFWEAGGEDEIAQGK-NVVDAAKRAG-VQHFVFSS 106
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 3e-10
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV LL+ G V V D S E + + K +LL+
Sbjct: 2 ILVTGGAGFIGSHLVDRLLEEGNEV--VVVDNLSSGRRENIEPEFENKAFRFVKRDLLDT 59
Query: 71 GSFDSAVDGCDGVFHTA--SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ A D VFH A V + +P D+ + V+ T NVL + +KR+V
Sbjct: 60 -ADKVAKKDGDTVFHLAANPDVRLGATDPDIDL-EENVLATYNVLEAMRAN-GVKRIVFA 116
Query: 129 SSIGAMLLNETPMTP 143
SS + + E + P
Sbjct: 117 SS--STVYGEAKVIP 129
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 3e-10
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVR---DPNSPKTEHLRELDGATERLHLFKAN 66
+TG +G S+L + LL++GY V VR N+ + +HL R+ L +
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKD---RITLHYGD 57
Query: 67 LLEEGSFDSAVDGC--DGVFHTA----SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
L + S A++ D ++H A V F D+P+ + +GTLN+L + +
Sbjct: 58 LTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSF--DDPE-YTAEVNAVGTLNLLEAIRILG 114
Query: 121 SIKRVVLTSS------IGAMLLNET----PMTP 143
R SS + + +ET P +P
Sbjct: 115 LDARFYQASSSEEYGKVQELPQSETTPFRPRSP 147
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 7e-10
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKAT-VRD--PNSPKTEHLRELDGATERLHLFKAN 66
V VTG GF+ +++LLL+R +K V D EH + G T + + +
Sbjct: 1 VCLVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKT-YVTDIEGD 59
Query: 67 LLEEGSFDSAVDGCDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
+ + A G V HTA+ V +F N + ++ + V GT VL +C + ++KR+
Sbjct: 60 IKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQN-NVKRL 117
Query: 126 VLTSSI 131
V TSSI
Sbjct: 118 VYTSSI 123
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 54/216 (25%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF SWL L + G V DP + + ++ + ++
Sbjct: 5 KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPT-NPNLFELANLD-NKISSTRGDIR 62
Query: 69 EEGSFDSAVDGC--DGVFH-TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
+ + A+ + VFH A P++ LS + + VMGT+N+L + + S+K V
Sbjct: 63 DLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAV 122
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW---------------YSLAKT 170
V +S D+ C ENKEW YS +K
Sbjct: 123 VNVTS-----------------DK--------CYENKEWGWGYRENDPLGGHDPYSSSKG 157
Query: 171 LAE--EAAWK---FAKEN----GIDLVAIHPGTVIG 197
AE ++++ F EN GI + + G VIG
Sbjct: 158 CAELIISSYRNSFFNPENYGKHGIAIASARAGNVIG 193
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-09
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 25/143 (17%)
Query: 9 KVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKAN 66
KVV +TG S G + L L +GY V AT R+P + L L + L + + +
Sbjct: 1 KVVLITGCSSGIGLA-LALALAAQGYRVIATARNP-----DKLESLGELLNDNLEVLELD 54
Query: 67 LLEEGSFDSAVDGC-------DGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLR 114
+ +E S +AV D + + A P+ S ++ + V G L V R
Sbjct: 55 VTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTR 114
Query: 115 SCAKVHSIK----RVVLTSSIGA 133
+ K R+V SS+
Sbjct: 115 AFLP-LMRKQGSGRIVNVSSVAG 136
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 4e-09
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTGA+G+V LV LLQ G+ V+A VR P + ER+ + + +L +
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEK-LADRPWS-----ERVTVVRGDLEDP 54
Query: 71 GSFDSAVDGCDGVFHTASPVIFL--SDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
S +A++G D + +L S D + N R+ +KR++
Sbjct: 55 ESLRAALEGIDTAY-------YLVHSMGSGGDFEEADRRAARNFARAARAA-GVKRIIYL 106
Query: 129 SSIGA 133
+
Sbjct: 107 GGLIP 111
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 5e-09
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+GFV +V+ LL RG+ V+A VR+P L G L +L + S
Sbjct: 5 VTGATGFVGGAVVRELLARGHEVRAAVRNPE--AAAALA--GGVEVVL----GDLRDPKS 56
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132
+ G DGV + + V + + +K V S +G
Sbjct: 57 LVAGAKGVDGVLLISG-----LLDGSDAFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLG 109
Query: 133 AMLLNETPMT 142
A + + +
Sbjct: 110 ADAASPSALA 119
|
Length = 275 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 9e-09
Identities = 46/194 (23%), Positives = 72/194 (37%), Gaps = 30/194 (15%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V + G +GF+ S LV LL+ G V+ R EL K +
Sbjct: 2 VLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPY------ELPLGGVDYI--KGDYENR 53
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLRSCAKVHSIKR 124
+SA+ G D V H AS + NP +P V T+ +L +CA I +
Sbjct: 54 ADLESALVGIDTVIHLAS-----TTNPATSNKNPILDIQTNVAPTVQLLEACAAA-GIGK 107
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
++ SS G + P I E+ + P+ Y ++K E+ + G
Sbjct: 108 IIFASSGGTVYGVPEQ-LP---ISESDPTLPI------SSYGISKLAIEKYLRLYQYLYG 157
Query: 185 IDLVAIHPGTVIGP 198
+D + GP
Sbjct: 158 LDYTVLRISNPYGP 171
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-08
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 26/131 (19%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATERLHLF 63
K + +TG +GF+ S L LL+ G+ V T R N EHL
Sbjct: 1 KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRN---IEHLI----GHPNFEFI 53
Query: 64 KANLLE--EGSFDSAVDGCDGVFHTASPV--IFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
+ ++ E D ++H A P + NP + V+GTLN+L +V
Sbjct: 54 RHDVTEPLYLEVDQ-------IYHLACPASPVHYQYNP-IKTLKTNVLGTLNMLGLAKRV 105
Query: 120 HSIKRVVLTSS 130
+ RV+L S+
Sbjct: 106 GA--RVLLAST 114
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 3e-08
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+G + S + LL+ G V+A VR + L GA + +L +
Sbjct: 3 VTGATGRIGSKVATTLLEAGRPVRALVRSDE--RAAALAAR-GA----EVVVGDLDDPAV 55
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132
+A+ G D VF A P + + + V A S + +KRVV SS+G
Sbjct: 56 LAAALAGVDAVFFLAPPA--PTADARPGYVQAA-----EAFASALREAGVKRVVNLSSVG 108
Query: 133 AMLLNETP 140
A + +
Sbjct: 109 ADPESPSG 116
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 4e-08
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
E+ V VTGA+G V S V +L + GYTV A + ++L+ L GA+E L
Sbjct: 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE--QADYLKSL-GASEVLDREDLL 202
Query: 67 L-----LEEGSFDSAVD 78
L + + A+D
Sbjct: 203 DESKKPLLKARWAGAID 219
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 5e-08
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKA 65
E+ +C+TGA GF+AS + + L G+ + A+ + K EH+ E D HL
Sbjct: 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIAS----DWKKNEHMSE-DMFCHEFHLVDL 73
Query: 66 NLLEEGSFDSAVDGCDGVFHTASP---VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI 122
++E G D VF+ A+ + F+ N + I+ M + N+L + +++ +
Sbjct: 74 RVMENCL--KVTKGVDHVFNLAADMGGMGFIQSN-HSVIMYNNTMISFNMLEAA-RINGV 129
Query: 123 KRVVLTSSIGAMLLNE-TPMTPDVVIDET--WFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
KR SS A + E + +V + E+ W + P ++ Y L K EE +
Sbjct: 130 KRFFYASS--ACIYPEFKQLETNVSLKESDAWPAEP------QDAYGLEKLATEELCKHY 181
Query: 180 AKENGIDLVAIHPGTVIGPF 199
K+ GI+ + GPF
Sbjct: 182 TKDFGIECRIGRFHNIYGPF 201
|
Length = 370 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-08
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ V GA+G+ +V+ L+ G+ V+A VRDP S + L+ G L + +L +
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAA-GVE----LVEGDLDDH 55
Query: 71 GSFDSAVDGCDGVF 84
S A+ G D VF
Sbjct: 56 ESLVEALKGVDVVF 69
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE--HLREL-DGATERLHLF 63
KV +TG +G S+L +LLL++GY V R +S T HL E RLHL
Sbjct: 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLH 60
Query: 64 KANLLEEGSFDSAVDGC--DGVFHTAS----PVIFLSDNPQ--ADIVDPAVMGTLNVL 113
+L + + ++ D +++ A+ V F + P+ AD+ +GTL +L
Sbjct: 61 YGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSF--EQPEYTADVD---AIGTLRLL 113
|
Length = 345 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-07
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VV V GA+GF+ ++V L +RG V R + L D ++ + +L
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE-AYARRLLVMGDLG--QVLFVEFDLR 57
Query: 69 EEGSFDSAVDGCDGV 83
++ S A++G D V
Sbjct: 58 DDESIRKALEGSDVV 72
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 4e-07
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 37/209 (17%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVK--ATVR--DPNSPKTEHLRELDG--------ATERL 60
+TGA+GF+ L++ LL+ VK VR D S +EL A ER+
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60
Query: 61 H-----LFKANL-LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLR 114
L + NL L + F + D + H A+ V F+ V+GT VLR
Sbjct: 61 IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDL--RATNVLGTREVLR 118
Query: 115 SCAKVHSIKRVVLTSSIGAMLLNE---TPMTPDVVIDETWFSNPVLCKENKEW---YSLA 168
++ S+ A + E +DE + Y+ +
Sbjct: 119 LAKQMKK-LPFHHVST--AYVNGERGGLLEEKPYKLDEDEPALL------GGLPNGYTQS 169
Query: 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIG 197
K LAE+ + A G+ +V P + G
Sbjct: 170 KWLAEQLVREAAG--GLPVVIYRPSIITG 196
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-07
Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 39/176 (22%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+G + + +V+LLL + +V A VR+P K DG + + + + +
Sbjct: 3 VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKA---FAADGV----EVRQGDYDDPET 55
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132
+ A +G D + SP Q N + + + +K +V S+ G
Sbjct: 56 LERAFEGVDRLL-LISPSDLEDRIQQH----------KNFIDAAKQAG-VKHIVYLSASG 103
Query: 133 AMLLNETPMTPD---------------VVIDETWFSNPVL-----CKENKEWYSLA 168
A + + D ++ WF + +L E Y A
Sbjct: 104 ADEDSPFLLARDHGATEKYLEASGIPYTILRPGWFMDNLLEFLPSILEEGTIYGPA 159
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 5e-07
Identities = 46/190 (24%), Positives = 67/190 (35%), Gaps = 29/190 (15%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTGA+GF+ S +V+ L+ G+ V R S E GA + + +L +
Sbjct: 3 VFVTGATGFIGSAVVRELVAAGHEVVGLAR---SDAGAAKLEAAGAQ----VHRGDLEDL 55
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADI-VDPAVMGTL-NVLRSCAKVHSIKRVVLT 128
A D V H A DN VD + L LR + K ++ T
Sbjct: 56 DILRKAAAEADAVIHLAF--THDFDNFAQACEVDRRAIEALGEALR-----GTGKPLIYT 108
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
S I + P +E P A+ ++E AA + A+ V
Sbjct: 109 SGIWLL----GPTGGQEEDEEAPDDPPT---------PAARAVSEAAALELAERGVRASV 155
Query: 189 AIHPGTVIGP 198
P V G
Sbjct: 156 VRLPPVVHGR 165
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 6e-07
Identities = 55/215 (25%), Positives = 83/215 (38%), Gaps = 54/215 (25%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF SWL LL+ G V DP + L+ A + F ++
Sbjct: 5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPT-SPNLFELLNLAKKIEDHF-GDIR 62
Query: 69 EEGSFDSAVDGC--DGVFHTAS-PVIFLS-DNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
+ A+ + VFH A+ P++ S +P + + VMGT+N+L + + S+K
Sbjct: 63 DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADP-LETFETNVMGTVNLLEAIRAIGSVKA 121
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW---------------YSLAK 169
VV +S D+ C N EW YS +K
Sbjct: 122 VVNVTS-----------------DK--------CYRNDEWVWGYRETDPLGGHDPYSSSK 156
Query: 170 TLAEEAAWKF-------AKENGIDLVAIHPGTVIG 197
AE + A +GI + + G VIG
Sbjct: 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIG 191
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 7e-07
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 35/209 (16%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA--TVRDPNSPKTEHLR-ELDGATERLHLFKA 65
+ VTGA+GF+ + K LL+RG V + D + + R EL G + K
Sbjct: 1 MKILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKG 60
Query: 66 N---------LLEEGSFDSAVDGCDGVFHTASP--VIFLSDNPQADIVDPAVMGTLNVLR 114
+ L ++ FD+ V H A+ V + +NP A VD ++G LN+L
Sbjct: 61 DLEDREALRRLFKDHEFDA-------VIHLAAQAGVRYSLENPHA-YVDSNIVGFLNLLE 112
Query: 115 SCAKVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 173
C + +K +V SS LN P + D +D P+ Y+ K E
Sbjct: 113 LC-RHFGVKHLVYASSSSVYGLNTKMPFSEDDRVDH-----PI------SLYAATKKANE 160
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQP 202
A ++ GI + TV GP+ +P
Sbjct: 161 LMAHTYSHLYGIPTTGLRFFTVYGPWGRP 189
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-06
Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 49/224 (21%)
Query: 9 KVVCVTGAS---GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL--DGATERLHLF 63
KV VTGAS G + + L + G V R E L + R
Sbjct: 6 KVALVTGASSGIGRA---IARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62
Query: 64 KANL-LEEGSFDSAVD-------GCD------GVFHTASPVIFLSDNPQADIVDPAVMGT 109
A++ +E S ++ V D G+ +P+ L++ ++D ++G
Sbjct: 63 AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122
Query: 110 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK 169
+ R+ + +R+V SS+ + P Y+ +K
Sbjct: 123 FLLTRAALPLMKKQRIVNISSVAGLGGP--PGQA--------------------AYAASK 160
Query: 170 ----TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE 209
L + A + A GI + A+ PG + P + + E
Sbjct: 161 AALIGLTKALALELAPR-GIRVNAVAPGYIDTPMTAALESAELE 203
|
Length = 251 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 41/213 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYT--VKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ VTG G V S +V++L +RGY V T ++ + L + + A
Sbjct: 2 ILVTGHRGLVGSAIVRVLARRGYENVVFRTSKELD------LTDQE-AVRA-------FF 47
Query: 69 EEGSFDSAVDGCDGVFHTASPV--IFLSDNPQAD-IVDPAVMGTLNVLRSCAKVHSIKRV 125
E+ D V H A+ V I + AD + D ++ NV+ + + K V
Sbjct: 48 EKEKP-------DYVIHLAAKVGGIVANMTYPADFLRDNLLIND-NVIHAAHRFGVKKLV 99
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 185
L SS + + P P IDE+ + E Y++AK + + K+ G
Sbjct: 100 FLGSS--CIYPDLAPQ-P---IDESDLLTGPP-EPTNEGYAIAKRAGLKLCEAYRKQYGC 152
Query: 186 DLVAIHPGTVIGPFFQPILNF---GAEVILNLI 215
D +++ P + GP NF + VI LI
Sbjct: 153 DYISVMPTNLYGPH----DNFDPENSHVIPALI 181
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 38/199 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQ--RGYTVKATVR---DPNSPKTEHLRELDGATERLHLFKA 65
+ VTGA+G + L + L R V R + PK E++R LD A
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPPKVEYVR-LDIRDPAA----A 55
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
++ E D V H A + D + ++ V GT NVL +CA + RV
Sbjct: 56 DVFRER-------EADAVVHLAFILDPPRDGAERHRIN--VDGTQNVLDACAA-AGVPRV 105
Query: 126 VLTSSI---GAMLLNETPMTPDV---VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
V+TSS+ GA N P+T D E +S E L E +
Sbjct: 106 VVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQ---------LLAEFRRRH 156
Query: 180 AKENGIDLVAIHPGTVIGP 198
+++ + P T++GP
Sbjct: 157 P---ELNVTVLRPATILGP 172
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 42/214 (19%)
Query: 11 VCVTGASGFVASWLV-KLLLQRGYTVKATVR-----------DPNSPKTEHLRELDGATE 58
V +TGA+GF+ ++L+ +LL + V VR + H EL +
Sbjct: 3 VLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELS--AD 60
Query: 59 RL-----HLFKANL-LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNV 112
R+ L + +L L E ++ + D + H A+ V + P +++ V+GT V
Sbjct: 61 RVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEV 118
Query: 113 LRSCAKVHSIKRVVLTSSIGAMLLN--------ETPMTPDVVIDETWFSNPVLCKENKEW 164
LR A K + SSI ++P + + K W
Sbjct: 119 LRLAA-TGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSK----W 173
Query: 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198
A+ L EA + G+ + PG + G
Sbjct: 174 V--AEKLVREAG-----DRGLPVTIFRPGYITGD 200
|
Length = 382 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 4e-06
Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 37/220 (16%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKAT--VR--DPNSPKT---EHLRELDGATERL-- 60
V +TGA+GF+ ++L++ LL+R K VR D + ++L+E
Sbjct: 1 TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60
Query: 61 ---------HLFKANL-LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTL 110
L K NL L + + + D + H + V ++ P ++ V+GT
Sbjct: 61 LSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVY--PYEELKPANVLGTK 118
Query: 111 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKT 170
+L+ A +K + S++ E D + + N Y +K
Sbjct: 119 ELLKLAAT-GKLKPLHFVSTLSV-FSAEEYNALDDEESDDMLESQNG-LPNG--YIQSKW 173
Query: 171 LAE----EAAWKFAKENGIDLVAIH-PGTVIGPFFQPILN 205
+AE EAA G+ VAI PG + G I N
Sbjct: 174 VAEKLLREAA-----NRGLP-VAIIRPGNIFGDSETGIGN 207
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-06
Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 25/134 (18%)
Query: 18 GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV 77
G++ L + LL +G+ V T R P L + + +
Sbjct: 7 GYLGQRLARQLLAQGWQVTGTTRSPEK-----------LAADRPAGVTPLAADLTQPGLL 55
Query: 78 DGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI------ 131
D + + P P G +L + A++ +++RV+ SS
Sbjct: 56 ADVDHLVISLPP-------PAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ 108
Query: 132 -GAMLLNETPMTPD 144
G + +P P
Sbjct: 109 QGEWVDETSPPNPS 122
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 5e-06
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVK------------ATVRDPNSPKTEHLRELDGATE 58
V +TGA+GF+ ++L++ LL+R K A R + ++ L D A E
Sbjct: 2 VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLARE 61
Query: 59 RL-----HLFKANL-LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNV 112
R+ L + L L + ++ + D + H + V ++ P +++ V+GT V
Sbjct: 62 RIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVY--PYSELRGANVLGTREV 119
Query: 113 LRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLA 172
LR A K + S+I V D+ + P Y+ +K +A
Sbjct: 120 LRLAAS-GRAKPLHYVSTISV---GAAIDLSTVTEDDATVTPP---PGLAGGYAQSKWVA 172
Query: 173 EEAAWKFAKENGIDLVAIHPGTVIG 197
E + A + G+ + + PG ++G
Sbjct: 173 ELLVRE-ASDRGLPVTIVRPGRILG 196
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 5e-06
Identities = 44/206 (21%), Positives = 74/206 (35%), Gaps = 45/206 (21%)
Query: 9 KVVCVTGASGFVASWLV-KLLLQ--------------RGYTVKATVRD-PNSPKTEHLRE 52
K V +TGA+GF+ L+ KLL G + + +R+ + R
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60
Query: 53 LDG-ATERLHLFKANLLEEGSFDSA------VDGCDGVFHTASPVIFLSDNPQADIVDPA 105
L+ ++ + +L E S ++ + + H A+ V F D + +
Sbjct: 61 LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTF--DERLDEALSIN 118
Query: 106 VMGTLNVLRSCAKVHSIKRVVLTSSIGAM------LLNET----PMTPDVVIDETWF--- 152
V+GTL +L + +K V S+ A L+ E P P+ +ID
Sbjct: 119 VLGTLRLLELAKRCKKLKAFVHVST--AYVNGDRQLIEEKVYPPPADPEKLIDILELMDD 176
Query: 153 --SNPVLCKENKEW---YSLAKTLAE 173
K Y+ K LAE
Sbjct: 177 LELERATPKLLGGHPNTYTFTKALAE 202
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 6e-06
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---NSPKTEHL-RELDGATER 59
G+ KV +TG +G S+L + LL +GY V +R N+ + +H+ + R
Sbjct: 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKAR 61
Query: 60 LHLFKANLLEEGSFDSAVDGC--DGVFHTA--SPVIFLSDNPQ--ADIVDPAVMGTLNVL 113
+ L +L + S +D D V++ A S V + P AD+V + L +
Sbjct: 62 MKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAV 121
Query: 114 RSCAK 118
R +
Sbjct: 122 RLHGQ 126
|
Length = 340 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 1e-05
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 32/153 (20%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLE 69
V VTG +G++ S V LL+ GY V V D S H L R+ ++ ++ +
Sbjct: 2 VLVTGGAGYIGSHTVVELLEAGYDV--VVLDNLS--NGHREALPRIEKIRIEFYEGDIRD 57
Query: 70 EGSFDSAVD--GCDGVFHTAS----------PVIFLSDNPQADIVDPAVMGTLNVLRSCA 117
+ D D V H A+ P+ + +N V+GTLN+L +
Sbjct: 58 RAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNN---------VVGTLNLLEAMR 108
Query: 118 KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDET 150
H +K V +SS A + E P I E
Sbjct: 109 A-HGVKNFVFSSS--AAVYGEPETVP---ITEE 135
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNSPKTEHLRELDGATERLH---- 61
E+ V VTGA+G V S V +L + GY V A T + + + ++L+EL GA+E +
Sbjct: 145 EDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGK---AEEEDYLKEL-GASEVIDREDL 200
Query: 62 LFKANLLEEGSFDSAVD 78
LE+ + AVD
Sbjct: 201 SPPGKPLEKERWAGAVD 217
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 3e-05
Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 26/145 (17%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHL-RELDGATERLHLFKANL 67
K VTGAS + + L G V + E L EL A + ++
Sbjct: 6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEE--AAEALAAELRAAGGEARVLVFDV 63
Query: 68 LEEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADI--------VDPAVMGTLNV 112
+E + + ++ D + + A I D + +D + GT NV
Sbjct: 64 SDEAAVRALIEAAVEAFGALDILVNNAG--IT-RDALLPRMSEEDWDRVIDVNLTGTFNV 120
Query: 113 LRSCAKVHSIK----RVVLTSSIGA 133
+R+ IK R+V SS+
Sbjct: 121 VRAALP-PMIKARYGRIVNISSVSG 144
|
Length = 246 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 41/219 (18%), Positives = 72/219 (32%), Gaps = 46/219 (21%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
VTGAS + + + L + G V R+ L ++ +A++ +E
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEE--ALAELAAIEALGGNAVAVQADVSDE 58
Query: 71 GSFDSAVD-------GCDGVFHTA--SPVIFLSDNPQADI---VDPAVMGTLNVLRSCAK 118
++ V+ D + + A + L + D +D + G + R+
Sbjct: 59 EDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118
Query: 119 VHSIK----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK----T 170
H K R+V SS+ P + Y+ +K
Sbjct: 119 -HMKKQGGGRIVNISSVAG-----------------LRPLP-----GQAAYAASKAALEG 155
Query: 171 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE 209
L A + A GI + A+ PG V P + AE
Sbjct: 156 LTRSLALELAPY-GIRVNAVAPGLVDTPMLAKLGPEEAE 193
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 3e-05
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V +TG G+ L L + G V + D P+ E E + +A++ +
Sbjct: 2 VLITGGGGYFGFRLGCALAKSG--VHVILFDIRRPQQE-------LPEGIKFIQADVRDL 52
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA-VMGTLNVLRSCAKVHSIKRVVLTS 129
+ AV G D VFH AS + + ++++ V GT N+++ C + + R++ TS
Sbjct: 53 SQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVR-RRVPRLIYTS 111
Query: 130 SI 131
+
Sbjct: 112 TF 113
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 18/188 (9%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
V +TGASGFV L + LL + + D SPK R+ +L
Sbjct: 2 KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAP------SGAPRVTQIAGDLAV 55
Query: 70 EGSFDSAVDG-CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
++ +G D VFH A+ V ++ V GT N+L + K R V T
Sbjct: 56 PALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFT 115
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SS+ L P+ V D T +P Y K + E +++ +D
Sbjct: 116 SSLAVYGLP----LPNPVTDHTAL-DPASS------YGAQKAMCELLLNDYSRRGFVDGR 164
Query: 189 AIHPGTVI 196
+ TV
Sbjct: 165 TLRLPTVC 172
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 5e-05
Identities = 46/219 (21%), Positives = 84/219 (38%), Gaps = 55/219 (25%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFKANLLE 69
V VTG +G++ S V+ LL+ G+ V V D S L +L ++ +LL+
Sbjct: 3 VLVTGGAGYIGSHTVRQLLKTGHEV--VVLDNLSNGHKIALLKLQF-----KFYEGDLLD 55
Query: 70 EGSFDSAVD--GCDGVFHTAS----------PVIFLSDNPQADIVDPAVMGTLNVLRSCA 117
+ + D V H A+ P+ + +N V+GTLN++ +
Sbjct: 56 RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN---------VVGTLNLIEAML 106
Query: 118 KVHSIKRVVLTSSIGAMLLNET---PMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEE 174
+ +K+ + +S+ A + E P++ + NP Y +K ++EE
Sbjct: 107 Q-TGVKKFIFSST--AAVYGEPTTSPISETSPLAPI---NP---------YGRSKLMSEE 151
Query: 175 AAWKFAKENGIDLVAI--------HPGTVIGPFFQPILN 205
AK N +V + P +G +
Sbjct: 152 ILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATL 190
|
Length = 329 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 6e-05
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-----KTEHLRELDGAT 57
S E ++ V V GA+G++ ++V+ L++RGY V A R+ + K + +EL GA
Sbjct: 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAE 114
|
Length = 390 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 7e-05
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 29/144 (20%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD--PNSPKT--EHLRELDGA-TE 58
+ + VTG +G++ S V LL GY V V D NS + ++EL G +
Sbjct: 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKV--VVIDNLDNSSEEALRRVKELAGDLGD 58
Query: 59 RLHLFKANLLEEGSFDSAVDGC--DGVFH----------TASPVIFLSDNPQADIVDPAV 106
L K +L ++ + + D V H A P+++ +N +
Sbjct: 59 NLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNN---------L 109
Query: 107 MGTLNVLRSCAKVHSIKRVVLTSS 130
+GT+N+L AK H K++V +SS
Sbjct: 110 VGTINLLEVMAK-HGCKKLVFSSS 132
|
Length = 352 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V V GA+G +V+ LL +G+ VKA VRD + KT ++ L + +A++
Sbjct: 18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQD-----PSLQIVRADVT 72
Query: 69 EEGS---FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVM---GTLNVLRSCAKVHSI 122
EGS ++ D D V + D P + GT+N++ +C K +
Sbjct: 73 -EGSDKLVEAIGDDSDAV------ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKA-GV 124
Query: 123 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 182
R +L SSI L+N M NP N +L L E K+ ++
Sbjct: 125 TRFILVSSI---LVNGAAMGQ--------ILNPAYIFLNLFGLTLVAKLQAE---KYIRK 170
Query: 183 NGIDLVAIHPG 193
+GI+ + PG
Sbjct: 171 SGINYTIVRPG 181
|
Length = 251 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +G++ S V+ LL+ G+ V + + ++ E L + T + + +L +
Sbjct: 2 ILVTGGAGYIGSHTVRQLLESGHEV-VILDNLSNGSREALPRGERITP-VTFVEGDLRDR 59
Query: 71 GSFDSAVDG--CDGVFH-TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
D + D V H + S V+GTLN+L + + +K+ +
Sbjct: 60 ELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQ-AGVKKFIF 118
Query: 128 TSS 130
+SS
Sbjct: 119 SSS 121
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 35/196 (17%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLFKANL 67
K+V +TG +GF+ L + L G+ V R P + DG +
Sbjct: 1 KIV-ITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEVITWDGLSLG-------- 51
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
+ G D V + A I ++ + +I+ + T ++ + A + +
Sbjct: 52 ------PWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPAPPK 105
Query: 125 V-VLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 182
V + S++G + +T + + + + +C K W E+AA A E
Sbjct: 106 VLISASAVGYYGHSGDEVLTENSPSGKDFLAE--VC---KAW--------EKAAQP-ASE 151
Query: 183 NGIDLVAIHPGTVIGP 198
G +V + G V+GP
Sbjct: 152 LGTRVVILRTGVVLGP 167
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
V GASG + + + L +RG+ V+ R + L G + A+ ++ S
Sbjct: 4 VLGASGPIGREVARELRRRGWDVRLVSRSGSKLA-----WLPGVE----IVAADAMDASS 54
Query: 73 FDSAVDGCDGVFHTASP 89
+A G D ++H A+P
Sbjct: 55 VIAAARGADVIYHCANP 71
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTV-------KATVRDPNSPKTEHLRELDGATERLH 61
V +TG +GF+ S L + L++G+ V + N + RE G +
Sbjct: 1 MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFG-NLAWLKANREDGG----VR 55
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLS--DNPQADIVDPAVMGTLNVLRSCAKV 119
++ + + D + HTA+ + +P+ D A+ GTLNVL + +
Sbjct: 56 FVHGDIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNAL-GTLNVLEAARQH 114
Query: 120 HSIKRVVLTSSI 131
+ TS+
Sbjct: 115 APNAPFIFTSTN 126
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNSPKTEHLRELDGATE---R 59
G+G V VTGA+G V S V LL + GY V A T R + ++LR L GA+E R
Sbjct: 146 GDGP---VLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEA---DYLRSL-GASEIIDR 198
Query: 60 LHLF-KANLLEEGSFDSAVDGCDG 82
L L++ + AVD G
Sbjct: 199 AELSEPGRPLQKERWAGAVDTVGG 222
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 9 KVVCVTGA-SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL 67
K V +TG SGF + L K L G+TV A N P + LR + ++RL + ++
Sbjct: 1 KAVLITGCDSGF-GNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRV--CSDRLRTLQLDV 57
Query: 68 LEEGSFDSAV 77
+ A
Sbjct: 58 TKPEQIKRAA 67
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 25/145 (17%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKA 65
++K V VTGA+ + V+ LL G V A VRDP S HL G ++ +
Sbjct: 2 KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGS--AAHLVAKYGD--KVVPLRL 57
Query: 66 NLLEEGSFDSAVDGCD---------GVFHTASPVIFLSDNPQAD--IVDPAVMGTLNVLR 114
++ + S +A GV A+ +A +D V G L + +
Sbjct: 58 DVTDPESIKAAAAQAKDVDVVINNAGVLKPATL--LEEGALEALKQEMDVNVFGLLRLAQ 115
Query: 115 SCAKVHSIKR-----VVLTSSIGAM 134
+ A V +K +V +S+ ++
Sbjct: 116 AFAPV--LKANGGGAIVNLNSVASL 138
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 4e-04
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 26/132 (19%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATER 59
MM +G KVV VTGA+ + V+ LL RG V A RDP S + R
Sbjct: 1 MMDIKG--KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES--------VTDLGPR 50
Query: 60 LHLFKANLLEEGSFDSAVDGCD---------GVFHTASPVIFLSDNPQADI---VDPAVM 107
+ + ++ + S +A + G+F T S L + + + ++
Sbjct: 51 VVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSL---LLEGDEDALRAEMETNYF 107
Query: 108 GTLNVLRSCAKV 119
G L + R+ A V
Sbjct: 108 GPLAMARAFAPV 119
|
Length = 238 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK---A 65
KV VTGAS + + + L + GY V +R+P E L L + +
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNP-----EDLAALSASGGDVEAVPYDAR 55
Query: 66 NLLEEGSFDSAV----DGCDGVFHTA 87
+ + + A+ D + H A
Sbjct: 56 DPEDARALVDALRDRFGRIDVLVHNA 81
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 36/194 (18%), Positives = 59/194 (30%), Gaps = 41/194 (21%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTV----KATVRDPNSPKTEHLRELDGATERLHLFKAN 66
+ + G + F+ LV+ LL G+ V + + EH+ D +R L
Sbjct: 3 ILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVEHIV-GD-RNDRDAL--EE 58
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
LL FD VD + V L+ + +K+ +
Sbjct: 59 LLGGEDFDVVVDTI--AYTPRQ-----------------VERALDAFK-----GRVKQYI 94
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-YSLAKTLAEEAAWKFAKENGI 185
SS L V+ + T P + W Y K AE+ +
Sbjct: 95 FISSASVYLKP-----GRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVL---IEAAAF 146
Query: 186 DLVAIHPGTVIGPF 199
+ P + GP
Sbjct: 147 PYTIVRPPYIYGPG 160
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 4e-04
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDG--ATERLHLFKA 65
K + VTG +G + S LV+ +L+ G + RD N E +REL ++L
Sbjct: 3 KTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENK-LHELVRELRSRFPHDKLRFIIG 61
Query: 66 NL--LEEGSFDSAVDGCDGVFHTAS--PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS 121
++ E G D VFH A+ V + DNP+ + V+GT NV+ + + +
Sbjct: 62 DVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEE-AIKTNVLGTKNVIDAAIE-NG 119
Query: 122 IKRVVLTSS 130
+++ V S+
Sbjct: 120 VEKFVCIST 128
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 38/188 (20%), Positives = 69/188 (36%), Gaps = 30/188 (15%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GASG S ++K L+RG+ V A VR+ + A + + + + ++ +
Sbjct: 3 IAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA---------ARQGVTILQKDIFDL 53
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
S S + G D V SDN D ++ L K + R+++
Sbjct: 54 TSLASDLAGHDAVISAFGA--GASDN------DELHSKSIEALIEALKGAGVPRLLVVGG 105
Query: 131 IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAI 190
G++ ++E ++D F E+ A AE E +D +
Sbjct: 106 AGSLEIDEGTR----LVDTPDFP--------AEYKPEALAQAEFLD-SLRAEKSLDWTFV 152
Query: 191 HPGTVIGP 198
P P
Sbjct: 153 SPAAFFEP 160
|
Length = 211 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 7e-04
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V +TG +G + S L++ LL+RG+ V + + + + EHL + L + + ++ ++
Sbjct: 3 VLITGGAGQIGSHLIEHLLERGHQV-VVIDNFATGRREHLPDHPN----LTVVEGSIADK 57
Query: 71 GSFDSAVDGC--DGVFHTASPVIFLSDNPQADIVDPA--VMGTLNVLRSCAKVHSIKRVV 126
D D V HTA+ +P D V+G NV+++ AK +KR++
Sbjct: 58 ALVDKLFGDFKPDAVVHTAAAY----KDPDDWYEDTLTNVVGGANVVQA-AKKAGVKRLI 112
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
+ A+ PM + +D + Y+++KT E + + +G+D
Sbjct: 113 YFQT--ALCYGLKPMQQPIRLDHPRAP----PGSS---YAISKTAGEY----YLELSGVD 159
Query: 187 LVAIHPGTVIGP 198
V V GP
Sbjct: 160 FVTFRLANVTGP 171
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 13 VTGASGFVASWLVKLLLQ--RGYTVKATVRDPNSPKTEHLRELDGATERLH 61
VTG +GF+ LV LL R TV VR + + E L GA +R+
Sbjct: 5 VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGA-DRVV 54
|
Length = 657 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 8e-04
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 57/211 (27%)
Query: 13 VTGAS---GFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+TGAS G LV+ LL RG TV AT RDP++ L L + RLH+ + ++
Sbjct: 3 ITGASRGIGLE---LVRQLLARGNNTVIATCRDPSA--ATELAALGASHSRLHILELDVT 57
Query: 69 EEGSFDSA--------VDGCDGVFHTASPVIFLSDNPQADIVDPA---------VMGTLN 111
+E + +SA G D + + A L A VD V+G L
Sbjct: 58 DEIA-ESAEAVAERLGDAGLDVLINNAG---ILHSYGPASEVDSEDLLEVFQVNVLGPLL 113
Query: 112 VLRSCA---KVHSIKRVVLTSS-IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167
+ ++ + +++ SS +G++ N W+S Y
Sbjct: 114 LTQAFLPLLLKGARAKIINISSRVGSIGDNT---------SGGWYS-----------YRA 153
Query: 168 AKTLAEEAAWKFAKEN---GIDLVAIHPGTV 195
+K A E GI +V++HPG V
Sbjct: 154 SKAALNMLTKSLAVELKRDGITVVSLHPGWV 184
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.001
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 33/132 (25%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK------TEHLRELDGATERLHLFKAN 66
VTG +GF+ S V+ LL + K D K E+L ++ + R K +
Sbjct: 5 VTGGAGFIGSNFVRYLLNKYPDYKIINLD----KLTYAGNLENLEDVSSS-PRYRFVKGD 59
Query: 67 LLEEGSFDSAV--DGCDGVFHTA----------SPVIFLSDNPQADIVDPAVMGTLNVLR 114
+ + D + D V H A P F+ N V+GT +L
Sbjct: 60 ICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTN---------VLGTYTLLE 110
Query: 115 SCAKVHSIKRVV 126
A+ + +KR V
Sbjct: 111 -AARKYGVKRFV 121
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
E+ V VTGA+G V S V +L + GY V A+ + ++L++L GA E +
Sbjct: 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTG--KADAADYLKKL-GAKEVIP 197
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.001
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GFV S LV L+ RG V + + + + E+L L G R L + +++E
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEV-IVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEP 180
Query: 71 GSFDSAVDGCDGVFHTASPV--IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ D ++H A P + NP + VMGTLN+L +V + R +LT
Sbjct: 181 ILLE-----VDQIYHLACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRVGA--RFLLT 232
Query: 129 SS 130
S+
Sbjct: 233 ST 234
|
Length = 436 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.002
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 17/202 (8%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLL 68
+C+ GA GF+ S L + L+ K D + K +HL E D + R+ + N+
Sbjct: 17 ICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIK 75
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQA-DIVDPAVMGTLNVLRSCAK-----VHSI 122
+ + + D + A+ N + D + + L V++ C++ +H
Sbjct: 76 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 135
Query: 123 KRVVLTSSIGAMLLNETPMTPD---VVIDETWFSNPVLCK--ENKEW-YSLAKTLAEEAA 176
V +IG+ L + P+ D V+ E +P + E + W Y+ AK L E
Sbjct: 136 TCEVYGKTIGSFLPKDHPLRQDPAFYVLKED--ESPCIFGSIEKQRWSYACAKQLIERLI 193
Query: 177 WKFAKENGIDLVAIHPGTVIGP 198
+ ENG++ + P IGP
Sbjct: 194 YAEGAENGLEFTIVRPFNWIGP 215
|
Length = 386 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.004
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
+ +TG +GF+ L + L +RG+ V R P T+ A E
Sbjct: 1 ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPWAGE----------- 49
Query: 70 EGSFDSAVDGCDGVFHTA 87
+++G D V + A
Sbjct: 50 ---DADSLEGADAVINLA 64
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.004
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 21/144 (14%)
Query: 9 KVVCVTGASG----FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLF 63
V +TG +G +A WL + + R +P L EL+ + +
Sbjct: 1 GTVLITGGTGGLGLALARWLAA---EGARHLVLVSRRGPAPGAAELVAELEALGAEVTVA 57
Query: 64 KANLLEEGSFDSAVDGC-------DGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLN 111
++ + + + + DGV H A P+ L+ ++ P V G N
Sbjct: 58 ACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWN 117
Query: 112 VLRSCAKVHSIKRVVLTSSIGAML 135
+ + VL SS+ +L
Sbjct: 118 LHELTRD-LDLGAFVLFSSVAGVL 140
|
This family contains a wide variety of dehydrogenases. Length = 167 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 232 | |||
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.98 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.98 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.97 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.97 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.97 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.97 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.97 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.97 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.96 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.96 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.96 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.96 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.96 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.96 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.96 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.96 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.95 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.95 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.95 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.95 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.95 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.95 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.95 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.95 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.95 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.95 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.95 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.95 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.95 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.95 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.95 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.95 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.95 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.95 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.95 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.95 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.95 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.95 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.94 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.94 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.94 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.94 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.94 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.94 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.94 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.94 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.94 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.94 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.94 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.94 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.94 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.94 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.94 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.94 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.94 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.94 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.94 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.94 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.94 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.94 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.94 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.94 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.94 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.94 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.94 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.94 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.94 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.94 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.94 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.94 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.94 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.94 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.93 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.93 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.93 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.93 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.93 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.93 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.93 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.93 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.93 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.93 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.93 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.93 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.93 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.93 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.93 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.93 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.93 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.93 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.93 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.93 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.93 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.93 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.93 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.93 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.93 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.92 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.92 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.92 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.92 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.92 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.92 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.92 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.92 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.92 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.92 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.92 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.92 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.92 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.92 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.92 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.92 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.92 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.92 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.92 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.92 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.92 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.92 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.92 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.92 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.92 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.92 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.92 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.91 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.91 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.91 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.91 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.91 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.91 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.91 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.91 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.91 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.91 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.91 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.9 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.9 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.9 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.9 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.9 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.9 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.9 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.9 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.9 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.9 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.89 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.89 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.89 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.89 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.89 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.88 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.88 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.88 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.88 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.88 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.87 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.87 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.87 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.87 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.86 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.86 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.86 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.85 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.84 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.84 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.84 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.83 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.83 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.83 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.83 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.83 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.82 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.82 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.82 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.82 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.8 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.8 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.77 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.77 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.74 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.72 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.71 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.69 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.64 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.64 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.64 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.62 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.59 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.54 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.5 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.42 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.36 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.32 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.24 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.23 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.19 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.15 | |
| PLN00106 | 323 | malate dehydrogenase | 99.06 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.06 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 99.01 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.84 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.8 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.79 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.77 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.77 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.73 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.71 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.69 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.69 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.69 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.62 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.59 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.57 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 98.56 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.38 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 98.37 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.37 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 98.35 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.34 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.33 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.3 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.21 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 98.18 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 98.18 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 98.18 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.17 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.17 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 98.04 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.02 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 98.0 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.99 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.99 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.98 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.88 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.87 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.85 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.85 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.81 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.81 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.8 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.78 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.77 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.74 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 97.71 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.69 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.67 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.67 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.61 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.59 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.56 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.55 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.52 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.52 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.51 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.47 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.46 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.43 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.43 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.43 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 97.41 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.37 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.36 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.35 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.31 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.3 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.28 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 97.28 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.26 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.25 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.23 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.22 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.22 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.21 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.18 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.17 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 97.16 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 97.12 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.11 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.1 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.08 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.05 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.02 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.02 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.02 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.01 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.98 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.97 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.97 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.96 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.94 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.9 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.89 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.88 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.86 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.85 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.84 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.83 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.83 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.81 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.81 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 96.79 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.79 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.79 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.78 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.76 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.75 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.75 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.75 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.73 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.7 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.7 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.68 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.68 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.67 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.66 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.66 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.64 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.64 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.64 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.63 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.63 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.62 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.6 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.59 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.58 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.56 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 96.56 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.55 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.55 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.54 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.52 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.48 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.48 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.47 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.43 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.4 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.39 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.38 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.38 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.37 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.32 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.32 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.3 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.29 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.27 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.25 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.24 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.23 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.22 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.22 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.19 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.19 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.19 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.18 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.13 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.13 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.13 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.12 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.12 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.11 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 96.1 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.1 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.04 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.04 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.03 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.01 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 96.0 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.98 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.98 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.95 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.94 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.93 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 95.93 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.93 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.92 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.91 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.9 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 95.9 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 95.89 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.85 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 95.83 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.83 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 95.82 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.79 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.78 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.7 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.69 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.68 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 95.68 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.68 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 95.67 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.66 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.66 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 95.63 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 95.61 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.58 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 95.58 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.58 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.56 |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=249.17 Aligned_cols=212 Identities=60% Similarity=0.989 Sum_probs=190.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.+++|+||||+||||+++++.|+++||.|.++.|+++.... +.+.++.....++..+..|++|++++.+++++||+|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 66899999999999999999999999999999999986432 45777777777899999999999999999999999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
.|.|+.....++..+.++..+.|+.+++++|.+...++|+|++||.++.........+....+|+.|..+.++..+..||
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 99987654444556899999999999999999986689999999998887765556667899999999999988888999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~ 218 (232)
..||.++|..++.++++.++..+.+.|+.|.||...+....+...+.+.+.|.
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~ 217 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL 217 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc
Confidence 99999999999999999999999999999999999887777888899999886
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=222.74 Aligned_cols=212 Identities=21% Similarity=0.273 Sum_probs=177.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
|++|||||.||||++.++++++.. .+|+.++.-.-....+.+..+.. ..++.|+++|+.|.+.+.++++ ++|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence 479999999999999999999884 55777776543322234443332 4689999999999999999998 589999
Q ss_pred Eccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 85 HTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 85 ~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|+|+.. .+.+...+...+++|+.||.+++++++++...-|+++|||. .+||.... .+..++|+....|. +
T Consensus 80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTD-EVYG~l~~--~~~~FtE~tp~~Ps------S 150 (340)
T COG1088 80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTD-EVYGDLGL--DDDAFTETTPYNPS------S 150 (340)
T ss_pred EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccc-cccccccC--CCCCcccCCCCCCC------C
Confidence 999864 45778888999999999999999999998433599999999 77776552 12356677666554 6
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+|++||+.++.+++.|.+.+|+++++.|+++-|||.+.++ ..+|..+.+.+.|. +||+|.|.|||||
T Consensus 151 PYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~ 220 (340)
T COG1088 151 PYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLY 220 (340)
T ss_pred CcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEE
Confidence 6999999999999999999999999999999999999887 58899999999999 9999999999998
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=228.47 Aligned_cols=223 Identities=57% Similarity=1.005 Sum_probs=167.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
-.+|+||||||+|+||++++++|+++|++|+++.|+.+.... ..+........+++++++|++|.+++.++++++|+||
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 357899999999999999999999999999999998764321 1111111123468999999999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceec-cCCCCCCCccccccCCCCChhhccccch
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAML-LNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|+|++......++..+.+++|+.|+.++++++.+..+.+|||++||.+.+. +... ..++...+|+.+..|.++.....
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~-~~~~~~~~E~~~~~p~~~~~~~~ 161 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPP-IEANDVVDETFFSDPSLCRETKN 161 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCcc-CCCCCCcCcccCCChHHhhcccc
Confidence 999975322223345678999999999999998754678999999986542 3211 11233466666655543333346
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
+|+.||.++|.+++.+.++++++++++||++++||...+........+.+.+.++ .+ +.+.|+|+|
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~v~ 228 (322)
T PLN02986 162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF--NNRFYRFVD 228 (322)
T ss_pred chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCC--CCcCcceeE
Confidence 7999999999999999888999999999999999987654334455666677666 33 367788887
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=227.63 Aligned_cols=223 Identities=57% Similarity=1.011 Sum_probs=169.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchh-hhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE-HLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++|++|||||+||||++++++|+++|++|++++|++...... .+........+++++++|++|.+++.++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 368999999999999999999999999999999887543211 1111111235688999999999999999999999999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+||.... .+.+++.+.+++|+.++.++++++.+.++.++||++||..++++......++.+.+|+.+..|........+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 9996432 234566788999999999999999886556899999998666543211111334566665555433233467
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
|+.||.++|.+++.+.++++++++++||++++||...+........+.+.+.++ .+. .+.|+|+|
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~--~~~r~~i~ 229 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFN--TTHHRFVD 229 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCC--CcCcCeeE
Confidence 999999999999999888899999999999999997654444556777777776 443 46689987
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=226.87 Aligned_cols=222 Identities=71% Similarity=1.124 Sum_probs=166.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++|+||||||+||||++++++|+++|++|++++|+...... ..+........+++++++|++|++++..+++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999998754221 11111111134789999999999999999999999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccccee-ccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+|++.......+....+++|+.++.++++++.+..+.+|+|++||..++ |+... ..++.+.+|+....|.++..+..+
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~-~~~~~~~~E~~~~~p~~~~~~~~~ 161 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKP-LTPDVVVDETWFSDPAFCEESKLW 161 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcC-CCCCCcCCcccCCChhHhhcccch
Confidence 9997542222222478899999999999999876467899999998643 43211 111234666665556554445567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
|+.+|.++|++++.+.++++++++++||++++||...+........+.+.+.+. .+ +.+.|+|+|
T Consensus 162 Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 227 (322)
T PLN02662 162 YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF--PNASYRWVD 227 (322)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC--CCCCcCeEE
Confidence 999999999999999888999999999999999987654334455666666654 33 346789987
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=227.90 Aligned_cols=220 Identities=47% Similarity=0.831 Sum_probs=166.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+++|+||||||+||||++++++|+++|++|++++|+.+......+..+.....+++++++|++|.+++.++++++|+|||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 46789999999999999999999999999999999875432222222222234688999999999999999999999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
+|++. ..++.+.+++|+.++.++++++.+. +.+|||++||..++|+.... .....++|+.+....++.....+|
T Consensus 88 ~A~~~----~~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~-~~~~~~~E~~~~~~~~~~~p~~~Y 161 (342)
T PLN02214 88 TASPV----TDDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNR-DPEAVVDESCWSDLDFCKNTKNWY 161 (342)
T ss_pred ecCCC----CCCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCC-CCCcccCcccCCChhhccccccHH
Confidence 99864 2356788999999999999999887 77899999998777754321 112245666543333333345679
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (232)
+.||.++|.+++.+.++++++++++||++|+||............+.+.+.+.....+.+.|+|+|
T Consensus 162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~ 227 (342)
T PLN02214 162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVD 227 (342)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeE
Confidence 999999999999998889999999999999999865432222223345555653334567899987
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=229.97 Aligned_cols=213 Identities=20% Similarity=0.181 Sum_probs=165.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-----CCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-----GATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+++|+||||||+|+||++++++|+++|++|++++|...... ....... ....+++++.+|++|.+.+..+++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQ-HNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcch-hhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 56789999999999999999999999999999998654322 1111111 11246889999999999999999999
Q ss_pred CEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 81 DGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 81 d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|+|||+|+.... ...+++...+++|+.|+.++++++.+. +.+++|++||. +.|+... +.+..|+....|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~-~vyg~~~----~~~~~e~~~~~p---- 161 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASS-STYGDHP----DLPKIEERIGRP---- 161 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeech-HhhCCCC----CCCCCCCCCCCC----
Confidence 999999986432 334566788999999999999999887 78899999998 4555332 222334333222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
..+|+.||.++|.+++.++++++++++++||++++||..++.. ..++.++.+.+.++ ++++|.+.|||+|
T Consensus 162 --~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~ 237 (348)
T PRK15181 162 --LSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCY 237 (348)
T ss_pred --CChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEE
Confidence 2469999999999999988888999999999999999865432 24566777777776 6789999999998
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.3e-31 Score=209.33 Aligned_cols=205 Identities=25% Similarity=0.295 Sum_probs=164.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
++||||||.|+||+|++.+|++.|++|+++|....... +.+... ...|+++|++|.+.+.+.|+ ++|+|||+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~-~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaViHF 74 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK-IALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVVHF 74 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH-HHhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999999999987554322 233221 16899999999999999997 68999999
Q ss_pred cccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||.. ...+.+.|.+.++.|+.||+.|++++.+. ++++|||.||+ +.||.+. ..++.|+....| .++|
T Consensus 75 Aa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStA-avYG~p~----~~PI~E~~~~~p------~NPY 142 (329)
T COG1087 75 AASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTA-AVYGEPT----TSPISETSPLAP------INPY 142 (329)
T ss_pred ccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecch-hhcCCCC----CcccCCCCCCCC------CCcc
Confidence 9953 44567888999999999999999999998 89999999999 6667655 466777765543 3779
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC-------cchHHHHHHHHcCC-----CCC------Ccccee
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGN-----IYS------AAIQDR 227 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~-------~~~~~~~~~~~~~~-----~~~------~~~~~~ 227 (232)
|.||.+.|++++.+++.++++++++|-.++.|...+... +...+.+....-|+ +|| ||+-.|
T Consensus 143 G~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iR 222 (329)
T COG1087 143 GRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIR 222 (329)
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeee
Confidence 999999999999999999999999998888876544321 23445555555555 454 799999
Q ss_pred eeec
Q 026852 228 IMIY 231 (232)
Q Consensus 228 ~~~~ 231 (232)
||||
T Consensus 223 DYIH 226 (329)
T COG1087 223 DYIH 226 (329)
T ss_pred eeee
Confidence 9998
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-30 Score=217.25 Aligned_cols=224 Identities=42% Similarity=0.711 Sum_probs=157.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++|+||||||+||||++++++|+++|++|++++|+.+.... .....+.. ..++.++++|++|.+++.++++++|+||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 567899999999999999999999999999999988653221 11111211 2368899999999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhh---cccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL---CKEN 161 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~~ 161 (232)
|+|++.......+....+++|+.++.++++++.+..+.+++|++||...++..... ....+.+|+.+..... ....
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~-~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLS-GTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCC-CCCceeccccCCchhhhhhcCCc
Confidence 99986432223333457799999999999999886457899999998655432110 0012233332211000 0112
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCC-Cccc----eeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYS-AAIQ----DRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~----~~~~~~ 231 (232)
..+|+.||.++|.+++.++++++++++++||++|+||............+.+.+.++ +.+ .+.+ .|||+|
T Consensus 165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 242 (338)
T PLN00198 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITH 242 (338)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeE
Confidence 355999999999999999988999999999999999986543333333444566665 333 3333 379987
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=218.08 Aligned_cols=214 Identities=24% Similarity=0.226 Sum_probs=161.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v 83 (232)
+++|+||||||+||||+++++.|+++|++|++++|+..... .....+. ...++.++.+|++|.+++.+++++ +|+|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP-NLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch-hHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 46789999999999999999999999999999999875432 1111121 124677899999999999999885 5999
Q ss_pred EEccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+||.. ...+..++...+++|+.++.++++++.+....+++|++||.. .|+.... ....+|.....| .
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~-vyg~~~~---~~~~~e~~~~~p------~ 149 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK-CYRNDEW---VWGYRETDPLGG------H 149 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh-hhCCCCC---CCCCccCCCCCC------C
Confidence 9999853 233456678899999999999999987652268999999984 4443210 112233322211 2
Q ss_pred hhHHHHHHHHHHHHHHHHHhc-------CCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKEN-------GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~-------~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
.+|+.||.+.|.+++.++.++ +++++++||+.++||........++.++.+...++ .++++.+.|||+|
T Consensus 150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~ 227 (349)
T TIGR02622 150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH 227 (349)
T ss_pred CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence 559999999999998887754 89999999999999975332234566667777776 6678999999998
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=203.73 Aligned_cols=170 Identities=18% Similarity=0.176 Sum_probs=142.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|+++|||||+|||.++++.|++.|++|++..|+.++.+ +...++.. ..+..+..|++|.++++++++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~-~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLE-ALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHH-HHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 367799999999999999999999999999999999986543 22222322 578999999999999777765
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .....++|+.++++|++|.++.+++.+|.| +.++||++||.++.++.+.
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~---------- 149 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG---------- 149 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC----------
Confidence 579999999953 335678999999999999999999999975 4579999999999877655
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
.+.|++||++...+.+.+.++ ++|||+.|.||.+.+..
T Consensus 150 ------------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~ 190 (246)
T COG4221 150 ------------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTE 190 (246)
T ss_pred ------------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceeccee
Confidence 366999999999999888887 48999999999996653
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=222.01 Aligned_cols=223 Identities=18% Similarity=0.159 Sum_probs=159.4
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc---------------hhhhhhhc-CCCCceEEEEcCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK---------------TEHLRELD-GATERLHLFKANL 67 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~---------------~~~~~~~~-~~~~~~~~~~~D~ 67 (232)
..+++|+||||||+||||++++++|+++|++|++++|...... ...++.+. ....+++++++|+
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 4578899999999999999999999999999999875321100 00111111 0123688999999
Q ss_pred CCcchHHHhhc--CCCEEEEccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhCCc-cEEEEecccceeccCCCC
Q 026852 68 LEEGSFDSAVD--GCDGVFHTASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 68 ~~~~~~~~~~~--~~d~vi~~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~vSS~~~~~~~~~~ 140 (232)
+|.+.+.++++ ++|+|||+|+.... ...++++..+++|+.|+.++++++.+. +. +++|++||. ..|+....
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS~-~vYG~~~~ 200 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGTM-GEYGTPNI 200 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEecc-eecCCCCC
Confidence 99999999998 48999999975321 122334567899999999999999887 55 489999999 45553221
Q ss_pred CCCccccc------cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-----------
Q 026852 141 MTPDVVID------ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI----------- 203 (232)
Q Consensus 141 ~~~~~~~~------e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~----------- 203 (232)
..++..++ |+..+. +....++|+.||.++|.+++.+++.+|++++++||+++|||+.+..
T Consensus 201 ~~~E~~i~~~~~~~e~~~~~---~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~ 277 (442)
T PLN02572 201 DIEEGYITITHNGRTDTLPY---PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLD 277 (442)
T ss_pred CCcccccccccccccccccC---CCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccC
Confidence 00111111 111111 1122356999999999999999998999999999999999986431
Q ss_pred -----CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 204 -----LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 204 -----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...+..++.+.+.++ ++++|+|.|||+|
T Consensus 278 ~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~ 313 (442)
T PLN02572 278 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLD 313 (442)
T ss_pred cccchhhHHHHHHHHHhcCCCceecCCCCEEECeEE
Confidence 123455666777776 6789999999998
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=207.56 Aligned_cols=174 Identities=18% Similarity=0.276 Sum_probs=145.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++++++|||||+|||.+++++|+++|++|+++.|+.++... ..+++.. .+..++++++|+++++++..+.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~-la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEA-LAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 3567899999999999999999999999999999999987653 3333332 24678899999999999988875
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||. +.+.+++..++++++|+.++..+++++.+.| +.++||+++|.+++.+.+.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~--------- 152 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY--------- 152 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc---------
Confidence 58999999984 3446677789999999999999999999874 5689999999988865433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|++||+..-.+.+.+..| +||+|.+++||.+.|++++
T Consensus 153 -------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 153 -------------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD 195 (265)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence 356888888888888887777 5899999999999999985
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=213.45 Aligned_cols=191 Identities=49% Similarity=0.873 Sum_probs=142.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh---cCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL---DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..|+||||||+||||++++++|+++|++|++++|+.+... .+..+ .....+++++++|++|.+.+.++++++|+|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V 81 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVK--KVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV 81 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhH--HHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence 3478999999999999999999999999999999865432 11111 111236889999999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhh---ccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL---CKE 160 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~ 160 (232)
||+|+........++...+++|+.++.++++++.+....+|||++||...+++.... ...++|+.+..... ...
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~---~~~~~E~~~~~~~~~~~~~~ 158 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ---KPVYDEDCWSDLDFCRRKKM 158 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC---CCccCcccCCchhhhhcccc
Confidence 999986532222334578999999999999999887336899999998655442211 01123332211110 011
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
...+|+.||.++|.+++.+++++|++++++||++++||....
T Consensus 159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~ 200 (351)
T PLN02650 159 TGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIST 200 (351)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCC
Confidence 224699999999999999999999999999999999998654
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=208.93 Aligned_cols=194 Identities=37% Similarity=0.653 Sum_probs=150.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++|+||||||+||||++++++|+++|++|++++|+.+.... ..+..+.....++.++++|++|.+++.+++.++|+|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 45789999999999999999999999999999997532211 12222222234688999999999999999999999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
.+++..... ..+++.+++|+.|+.++++++.+.++.+|||++||..++...........+.+|+.+..+.+...+..+|
T Consensus 85 ~~~~~~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y 163 (297)
T PLN02583 85 CFDPPSDYP-SYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWH 163 (297)
T ss_pred eCccCCccc-ccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHH
Confidence 887543322 3457899999999999999998875678999999986654221111123356676665555555555679
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
+.||.++|++++.++++++++++++||++|+||...
T Consensus 164 ~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 164 ALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT 199 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence 999999999999998888999999999999999754
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=208.70 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=149.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+++|+||||||+||||++++++|+++| ++|++++|+..+.. .....+. ..++.++++|++|.+++.++++++|+|
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~~iD~V 78 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQW-EMQQKFP--APCLRFFIGDVRDKERLTRALRGVDYV 78 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHH-HHHHHhC--CCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence 467899999999999999999999986 78999988764321 1111221 246889999999999999999999999
Q ss_pred EEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+||... .....++.+.+++|+.|+.++++++.+. +.++||++||.....+ .
T Consensus 79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~~p-------------------------~ 132 (324)
T TIGR03589 79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAANP-------------------------I 132 (324)
T ss_pred EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCCC-------------------------C
Confidence 99998642 2234456789999999999999999986 6789999999733211 1
Q ss_pred hhHHHHHHHHHHHHHHHHH---hcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~---~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
.+|+.||.++|.+++.++. ++|++++++|||+|+||.. ..++.+......+. .+.++.+.|+|+|
T Consensus 133 ~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~ 203 (324)
T TIGR03589 133 NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWIT 203 (324)
T ss_pred CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEE
Confidence 4599999999999877543 4699999999999999863 23343444444443 4457889999997
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=205.80 Aligned_cols=207 Identities=30% Similarity=0.398 Sum_probs=152.2
Q ss_pred EEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcccc
Q 026852 12 CVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASP 89 (232)
Q Consensus 12 lItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag~ 89 (232)
|||||+||+|++++++|+++| ++|.++++++.......... .....++++|++|.+++.++++++|+|||+|++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~----~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~ 76 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK----SGVKEYIQGDITDPESLEEALEGVDVVFHTAAP 76 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc----ccceeEEEeccccHHHHHHHhcCCceEEEeCcc
Confidence 699999999999999999999 78999998776432111111 123349999999999999999999999999997
Q ss_pred cccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHH
Q 026852 90 VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK 169 (232)
Q Consensus 90 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK 169 (232)
.......+.+..+++|+.||.+++++|.+. +++|+||+||...+...... .+-...+|.+. .+ .....+|+.||
T Consensus 77 ~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~-~~~~~~dE~~~-~~---~~~~~~Y~~SK 150 (280)
T PF01073_consen 77 VPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKG-DPIINGDEDTP-YP---SSPLDPYAESK 150 (280)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCC-CCcccCCcCCc-cc---ccccCchHHHH
Confidence 655445677889999999999999999987 89999999999777542211 01112234332 21 22346699999
Q ss_pred HHHHHHHHHHHH---h--cCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 170 TLAEEAAWKFAK---E--NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 170 ~~~~~~~~~~~~---~--~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+++|++++.... + ..++.++|||..|+||............ ...+. ..+++....+|+|
T Consensus 151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~---~~~g~~~~~~g~~~~~~~~vy 217 (280)
T PF01073_consen 151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM---VRSGLFLFQIGDGNNLFDFVY 217 (280)
T ss_pred HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH---HHhcccceeecCCCceECcEe
Confidence 999999987655 2 2499999999999999865544333222 22332 5666766777776
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=204.78 Aligned_cols=174 Identities=22% Similarity=0.242 Sum_probs=140.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
++.+|+|+|||||+|||.+++.+|+++|.+++++.|...+.+. +.+.+..... +++.+++|++|.+++.++++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999988876543 1222222222 69999999999999997764
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+...++..+.|++|++|+..++++++|+| +.++||++||+++..+.+..
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~------- 160 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR------- 160 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc-------
Confidence 679999999953 234556778899999999999999999985 34899999999988765541
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---C--CcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---G--IDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~--i~~~~v~pg~v~g~~~~~ 202 (232)
..|++||.+.+.+.+.++.|. + +++ +|+||+|.|.+...
T Consensus 161 ---------------~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~ 204 (282)
T KOG1205|consen 161 ---------------SIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK 204 (282)
T ss_pred ---------------cccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence 359999999999999998884 3 344 79999999986543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=210.82 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=155.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
.+.|+||||||+||||++++++|+++ |++|++++|+.++.. .+.... ....+++++.+|++|.+.+.++++++|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~--~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ 89 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIK--HLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL 89 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhh--hhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence 55678999999999999999999998 599999998764321 111110 1124689999999999999999999999
Q ss_pred EEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCC-C-CCcccccc---------C
Q 026852 83 VFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP-M-TPDVVIDE---------T 150 (232)
Q Consensus 83 vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~-~-~~~~~~~e---------~ 150 (232)
|||+|+.... ....++.+.+..|+.++.++++++.+. + +++|++||.. .|+.... . .++.+..+ +
T Consensus 90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~-vYg~~~~~~~~e~~p~~~~~~~~~~~e~ 166 (386)
T PLN02427 90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCE-VYGKTIGSFLPKDHPLRQDPAFYVLKED 166 (386)
T ss_pred EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeee-eeCCCcCCCCCccccccccccccccccc
Confidence 9999986432 222344566789999999999999876 5 7999999984 5553221 1 11111111 1
Q ss_pred CCCChh-hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC----------CcchHHHHHHHHcCC-
Q 026852 151 WFSNPV-LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI----------LNFGAEVILNLINGN- 218 (232)
Q Consensus 151 ~~~~~~-~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~----------~~~~~~~~~~~~~~~- 218 (232)
+.+.+. ........|+.||.++|.++..+++.++++++++||++|+||..... ...+..++.+.+.++
T Consensus 167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 246 (386)
T PLN02427 167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP 246 (386)
T ss_pred ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence 100000 00011245999999999999988888899999999999999985321 112233445566666
Q ss_pred --CCCCccceeeeec
Q 026852 219 --IYSAAIQDRIMIY 231 (232)
Q Consensus 219 --~~~~~~~~~~~~~ 231 (232)
+++++.+.|+|+|
T Consensus 247 ~~~~g~g~~~r~~i~ 261 (386)
T PLN02427 247 LKLVDGGQSQRTFVY 261 (386)
T ss_pred eEEECCCCceECcEe
Confidence 6678899999998
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=208.38 Aligned_cols=212 Identities=20% Similarity=0.270 Sum_probs=157.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEE-EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 85 (232)
|+||||||+||||+++++.|+++|++|++ ++|.........+.... ...++.++++|++|.+++.+++++ +|+|||
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 58999999999999999999999987554 44433211111111111 124678899999999999999984 899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhh--------CCccEEEEecccceeccCCCCCCCccccccCCCCChh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKV--------HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV 156 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~ 156 (232)
+||.... .+.+.++..+++|+.++.++++++.+. .+.+++|++||.. .|+.... ...+++|+....|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~--~~~~~~E~~~~~p- 156 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHS--TDDFFTETTPYAP- 156 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCC--CCCCcCCCCCCCC-
Confidence 9986532 234566889999999999999999874 1356999999984 4443210 1223444433222
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++++++++++++||++++||...+. ..++.++.+.+.++ +++++++.|+|+|
T Consensus 157 -----~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 228 (355)
T PRK10217 157 -----SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLY 228 (355)
T ss_pred -----CChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCc
Confidence 245999999999999999888999999999999999986433 34566777777666 5689999999998
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=207.37 Aligned_cols=211 Identities=18% Similarity=0.180 Sum_probs=156.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-----CCCceEEEEcCCCCcchHHHhhcC--CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVDG--CD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--~d 81 (232)
|+||||||+||||++++++|+++|++|++++|+++....+.+..+.. ...+++++++|++|.+++.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999999865321111221110 124688999999999999999985 69
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCc---cEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSI---KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
+|||+|+.... ...+.+...+++|+.|+.++++++.+. +. .++|++||. ..|+... ..+.+|+....|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~-~vyg~~~----~~~~~E~~~~~p-- 152 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTS-ELYGKVQ----EIPQNETTPFYP-- 152 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccH-HhhCCCC----CCCCCCCCCCCC--
Confidence 99999986432 223445677889999999999999886 33 489999999 4555432 122334432222
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC--CcchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI--LNFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
.++|+.||.++|.+++.+++++++++...++.++++|..... ......++.+...++ .+++|++.|||+|
T Consensus 153 ----~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~ 228 (343)
T TIGR01472 153 ----RSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGH 228 (343)
T ss_pred ----CChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCcee
Confidence 356999999999999999888899999999999999874322 123344555566664 4588999999998
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=190.53 Aligned_cols=200 Identities=17% Similarity=0.173 Sum_probs=159.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
++.|+++||||++|||+++++.|++.|++|.+.+++....+ .....+.. ..+-.-++||+++.++++..++
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~-ata~~L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAE-ATAGDLGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHH-HHHhhcCC-CCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 45689999999999999999999999999999999876432 33334433 2455678999999999888665
Q ss_pred CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC-----CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH-----SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+++++||||...+ +..++|++.+.+|+.|++++.+++.+.+ ...+||++||+.+..++.+
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G--------- 160 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG--------- 160 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc---------
Confidence 46999999997543 6789999999999999999999988762 2249999999988877665
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCCCCccce
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQD 226 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (232)
...|+++|.++.++||.++.++. ++|||+|.|+||+|.||+....++....-+...+.-..++..+..
T Consensus 161 -----QtnYAAsK~GvIgftktaArEla-----~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~Eev 228 (256)
T KOG1200|consen 161 -----QTNYAASKGGVIGFTKTAARELA-----RKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEV 228 (256)
T ss_pred -----chhhhhhcCceeeeeHHHHHHHh-----hcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHH
Confidence 67889999999999999999988 789999999999999999877765444444444433355554443
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=205.79 Aligned_cols=210 Identities=19% Similarity=0.288 Sum_probs=157.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-CcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~~ 86 (232)
|+||||||+|+||++++++|++. |++|++++|+.... ..+.. ...++++.+|++ +.+.+.++++++|+|||+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~-----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~ 75 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL-----GDLVN-HPRMHFFEGDITINKEWIEYHVKKCDVILPL 75 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH-----HHhcc-CCCeEEEeCCCCCCHHHHHHHHcCCCEEEEC
Confidence 57999999999999999999987 69999999865321 11111 245889999998 778888889999999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCCh-hhccccchh
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP-VLCKENKEW 164 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~ 164 (232)
|+.... ....+++..+++|+.++.++++++.+. + +++|++||.. .|+... ..+.+|+..+.. .........
T Consensus 76 aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~-vyg~~~----~~~~~ee~~~~~~~~~~~p~~~ 148 (347)
T PRK11908 76 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSE-VYGMCP----DEEFDPEASPLVYGPINKPRWI 148 (347)
T ss_pred cccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecce-eeccCC----CcCcCccccccccCcCCCccch
Confidence 986432 234566788999999999999999886 5 7999999984 455332 122333322110 000112356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-------CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|+.||.++|++++.++.+++++++++||+.++||...+. ...++.++.+.+.++ +++++++.|+|+|
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~ 225 (347)
T PRK11908 149 YACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTD 225 (347)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecccc
Confidence 999999999999999888999999999999999985431 123455666677676 5678999999998
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-28 Score=204.82 Aligned_cols=196 Identities=51% Similarity=0.785 Sum_probs=141.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
-.+++||||||+||||++++++|+++|++|++++|+..+.. .....+.. ..+++++++|+++.+++.++++++|+|||
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSL-HLLSKWKE-GDRLRLFRADLQEEGSFDEAVKGCDGVFH 85 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHhhcc-CCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 35679999999999999999999999999999999864322 12222222 35688999999999999999999999999
Q ss_pred cccccccC---CCCchh-----hhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 86 TASPVIFL---SDNPQA-----DIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 86 ~Ag~~~~~---~~~~~~-----~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
+|+..... ...++. +.++.|+.++.++++++.+..+.++||++||...+........+..+++|+......+
T Consensus 86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~ 165 (353)
T PLN02896 86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDH 165 (353)
T ss_pred CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHH
Confidence 99864321 222333 4556678999999999988744789999999854432211100112234432111110
Q ss_pred ---ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 158 ---CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 158 ---~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
......+|+.||.++|.+++.++++++++++++||++|+||.....
T Consensus 166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~ 214 (353)
T PLN02896 166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS 214 (353)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC
Confidence 0112246999999999999999998999999999999999987544
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-28 Score=219.20 Aligned_cols=212 Identities=20% Similarity=0.331 Sum_probs=160.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch-HHHhhcCCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FDSAVDGCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi 84 (232)
++|+||||||+||||++++++|+++ |++|++++|+..... .... ..+++++.+|++|.+. +.++++++|+||
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~-----~~~~-~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi 387 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS-----RFLG-HPRFHFVEGDISIHSEWIEYHIKKCDVVL 387 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh-----hhcC-CCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence 5688999999999999999999986 799999999764211 1111 2468899999998765 577889999999
Q ss_pred Eccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc-cc
Q 026852 85 HTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE-NK 162 (232)
Q Consensus 85 ~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~ 162 (232)
|+|+.... .....+.+.+++|+.++.++++++.+. + +++||+||. ..|+... ..+.+|+....+..+.. ..
T Consensus 388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~-~vyg~~~----~~~~~E~~~~~~~~p~~~p~ 460 (660)
T PRK08125 388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTS-EVYGMCT----DKYFDEDTSNLIVGPINKQR 460 (660)
T ss_pred ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcch-hhcCCCC----CCCcCccccccccCCCCCCc
Confidence 99986433 234456778999999999999999987 5 799999998 4555322 22344543321111111 12
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-------CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
..|+.||.++|.+++.+++.++++++++||++++||..... ...++.++.+.+.++ +++++.+.|+|+|
T Consensus 461 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~ 539 (660)
T PRK08125 461 WIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTD 539 (660)
T ss_pred cchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceee
Confidence 45999999999999999888999999999999999986431 124566777777776 5688999999998
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-28 Score=192.83 Aligned_cols=203 Identities=28% Similarity=0.351 Sum_probs=162.4
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC--CEEEEccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC--DGVFHTAS 88 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~Ag 88 (232)
||||||+|+||++++++|+++|+.|+.+.|+...... .... .++.++++|+.|.+.+.++++.. |.|||+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~---~~~~---~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESF---EEKK---LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHH---HHHH---TTEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccc---cccc---ceEEEEEeeccccccccccccccCceEEEEeec
Confidence 7999999999999999999999999988888764321 1111 17899999999999999999866 99999998
Q ss_pred ccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 89 PVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 89 ~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
... ..........++.|+.++.++++++.+. +.+++|++||. ..|+... ..+.+|+....| ...|+.
T Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~-~~y~~~~----~~~~~e~~~~~~------~~~Y~~ 142 (236)
T PF01370_consen 75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSA-SVYGDPD----GEPIDEDSPINP------LSPYGA 142 (236)
T ss_dssp SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEG-GGGTSSS----SSSBETTSGCCH------SSHHHH
T ss_pred cccccccccccccccccccccccccccccccc-ccccccccccc-ccccccc----cccccccccccc------cccccc
Confidence 642 1222566788999999999999999998 66899999997 5555442 344555544432 245999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCC-C-CCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF-F-QPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~-~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+|...|++++.+.++++++++++||+.++||. . .......+.++.+...++ +++++.+.|+|+|
T Consensus 143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 211 (236)
T PF01370_consen 143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIH 211 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEE
Confidence 99999999999998889999999999999999 1 122235567777788777 7899999999998
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=201.88 Aligned_cols=212 Identities=21% Similarity=0.234 Sum_probs=155.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|+||||||+|+||++++++|.++|++|++++|...... .. .....+++.+|++|.+.+..+++++|+|||+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~----~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 92 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM----SE---DMFCHEFHLVDLRVMENCLKVTKGVDHVFNL 92 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc----cc---ccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence 5689999999999999999999999999999998653211 10 0112568889999999999989999999999
Q ss_pred cccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 87 ASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 87 Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
|+.... .....+...++.|+.++.++++++.+. +.+++|++||.. .|+......++....|+.. .+......
T Consensus 93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~-vYg~~~~~~~~~~~~E~~~----~p~~p~s~ 166 (370)
T PLN02695 93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSAC-IYPEFKQLETNVSLKESDA----WPAEPQDA 166 (370)
T ss_pred ccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchh-hcCCccccCcCCCcCcccC----CCCCCCCH
Confidence 985432 122334556789999999999999876 788999999984 5554321111112223221 01112356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--c-chHHHHHHHHcC-C---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--N-FGAEVILNLING-N---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~-~~~~~~~~~~~~-~---~~~~~~~~~~~~~ 231 (232)
|+.+|..+|.+++.++..++++++++||++++||...... . ....++.+.+.. . +++++.+.|+|+|
T Consensus 167 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~ 240 (370)
T PLN02695 167 YGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTF 240 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEe
Confidence 9999999999999988888999999999999999754321 1 234455555543 2 6789999999998
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-28 Score=196.21 Aligned_cols=171 Identities=18% Similarity=0.144 Sum_probs=136.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.++++|+++||||+|+||+++++.|+++|++|++++|++.+.. +..+.+ ..++.++++|+++.+++.++++
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGS-KVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999998865322 111222 3468899999999998877654
Q ss_pred --CCCEEEEccccccc-------CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVIF-------LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.... .+.+.++..+++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~-------- 153 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD-------- 153 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--------
Confidence 47999999985421 2445678899999999999999998753 3478999999876654322
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+++.++.++ ++++++++||++.|++.
T Consensus 154 --------------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 154 --------------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP 194 (255)
T ss_pred --------------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence 1349999999999999998885 69999999999999764
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=196.29 Aligned_cols=174 Identities=21% Similarity=0.193 Sum_probs=140.3
Q ss_pred CCCCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
||+++++|+++||||+ +|||++++++|+++|++|++++|+.. .. +.++++. ..++.++++|++|+++++++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~-~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~ 76 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MK-KSLQKLV--DEEDLLVECDVASDESIERAFAT 76 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HH-HHHHhhc--cCceeEEeCCCCCHHHHHHHHHH
Confidence 7888999999999999 89999999999999999999999732 21 2233332 2457899999999999888765
Q ss_pred ------CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCC
Q 026852 79 ------GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~ 142 (232)
++|++|||||... +.+.++++..+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~--- 153 (252)
T PRK06079 77 IKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN--- 153 (252)
T ss_pred HHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc---
Confidence 4799999998532 23456788999999999999999999875 3468999999866533221
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||.|.|++..
T Consensus 154 -------------------~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~ 196 (252)
T PRK06079 154 -------------------YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVT 196 (252)
T ss_pred -------------------chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc
Confidence 244999999999999998887 4899999999999999753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=200.73 Aligned_cols=214 Identities=20% Similarity=0.184 Sum_probs=158.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc----CCCCceEEEEcCCCCcchHHHhhcC-
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD----GATERLHLFKANLLEEGSFDSAVDG- 79 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~- 79 (232)
..++|+||||||+||||++++++|+++|++|++++|+++......++.+. ....++.++++|++|.+++.+++++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 35678999999999999999999999999999999876432111222221 1134688999999999999999884
Q ss_pred -CCEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCc-----cEEEEecccceeccCCCCCCCccccccCCC
Q 026852 80 -CDGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSI-----KRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 80 -~d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|+|||+|+.... .....+...+++|+.++.++++++.+. +. .++|++||. ..|+.... +.+|+..
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~-~vyg~~~~-----~~~E~~~ 155 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSS-EMYGSTPP-----PQSETTP 155 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccH-HHhCCCCC-----CCCCCCC
Confidence 6999999986432 233456778899999999999999887 33 289999998 45554321 3344433
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccce
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQD 226 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~ 226 (232)
..| ...|+.||.++|.+++.++.++++++...++.++++|...... ..+..++.+...++ ..+++.+.
T Consensus 156 ~~p------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 229 (340)
T PLN02653 156 FHP------RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDAS 229 (340)
T ss_pred CCC------CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcce
Confidence 222 3569999999999999999889998888899889998753321 12233344455554 34889999
Q ss_pred eeeec
Q 026852 227 RIMIY 231 (232)
Q Consensus 227 ~~~~~ 231 (232)
|||+|
T Consensus 230 rd~i~ 234 (340)
T PLN02653 230 RDWGF 234 (340)
T ss_pred eccee
Confidence 99998
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-28 Score=197.22 Aligned_cols=176 Identities=18% Similarity=0.134 Sum_probs=141.0
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc--
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
...+++|+++||||+||||+++++.|+++|++|++++|+++... +..+++.. ...++.++++|++|.+++..+++
T Consensus 2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAE-RAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 35588999999999999999999999999999999999875432 22333322 24568899999999999988876
Q ss_pred -----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... ..+.++++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 154 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG------ 154 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC------
Confidence 5799999999532 23456788999999999999999998764 3479999999866543221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||++.||+..
T Consensus 155 ----------------~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~ 197 (260)
T PRK07063 155 ----------------CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTE 197 (260)
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhh
Confidence 234999999999999888876 4899999999999998743
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=195.91 Aligned_cols=173 Identities=23% Similarity=0.134 Sum_probs=139.3
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
||...+++|+++||||+||||++++++|+++|++|++++|++.. .+..+++.....++.++++|+++.+++.++++
T Consensus 1 ~~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK12823 1 MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV--HEVAAELRAAGGEALALTADLETYAGAQAAMAAA 78 (260)
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH--HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHH
Confidence 57777899999999999999999999999999999999998531 13333443334568899999999998887765
Q ss_pred -----CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 -----GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 -----~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||.. ...+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+. +..
T Consensus 79 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~------ 151 (260)
T PRK12823 79 VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-GIN------ 151 (260)
T ss_pred HHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-CCC------
Confidence 579999999832 224566778899999999999998888753 44799999998543 110
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~ 199 (232)
...|+.||++.+.+++.++.+. |+++++++||+++||+
T Consensus 152 -----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 152 -----------------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred -----------------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 1349999999999999998875 9999999999999985
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=197.38 Aligned_cols=173 Identities=15% Similarity=0.165 Sum_probs=139.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||+++++.|+++|++|++++|+.++.. +..+++.. ...++.++++|++|.++++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLK-KAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 378899999999999999999999999999999999875432 22223322 13468899999999999988876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++.+++|+.++..+++++.+.+ +.++||++||..+..+.+.
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~---------- 153 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN---------- 153 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc----------
Confidence 479999999853 234567889999999999999999998864 3479999999966543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+.+.++.+ +||||++|+||++.||+.
T Consensus 154 ------------~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~ 195 (263)
T PRK08339 154 ------------IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRV 195 (263)
T ss_pred ------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHH
Confidence 134888999988888888887 489999999999999864
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-27 Score=200.80 Aligned_cols=220 Identities=31% Similarity=0.542 Sum_probs=153.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC------CCCceEEEEcCCCCcchHHHhhc
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG------ATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
.+++|+||||||+||||++++++|+++|++|+++.|+.+.. +.+..+.. ...++.++++|++|.+++.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~--~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK--EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 46789999999999999999999999999999988876432 12222210 01357899999999999999999
Q ss_pred CCCEEEEcccccccCC-CCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccc-eeccCCCCCCCccccccCCCCChh
Q 026852 79 GCDGVFHTASPVIFLS-DNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG-AMLLNETPMTPDVVIDETWFSNPV 156 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~-~~~~~~~~~~~~~~~~e~~~~~~~ 156 (232)
++|.|||+|+...... ........++|+.++.++++++.+..+++|+|++||.. ..|+..........++|+.+....
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 9999999998653221 11224556789999999999998754688999999974 344321100001223444332222
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
.+..+..+|+.||.++|.+++.+++++|++++++||++|+||....... ..+.+.+.+. +++++. ++|+|
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~~g~~~~~g~g~--~~~v~ 279 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS---TATIAYLKGAQEMLADGL--LATAD 279 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC---hhHHHHhcCCCccCCCCC--cCeEE
Confidence 2223345799999999999999988899999999999999998643321 1233444454 556554 34654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-28 Score=197.89 Aligned_cols=175 Identities=16% Similarity=0.108 Sum_probs=137.0
Q ss_pred CCCCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
|..+|++|++|||||++ |||++++++|+++|++|++++|+.... +.++++........++++|++|.+++.++++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~--~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~ 78 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG--KRVKPLAESLGSDFVLPCDVEDIASVDAVFEA 78 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH--HHHHHHHHhcCCceEEeCCCCCHHHHHHHHHH
Confidence 45568899999999997 999999999999999999999875321 2222222111223578999999999988865
Q ss_pred ------CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCC
Q 026852 79 ------GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~ 142 (232)
++|++|||||... +.+.++|++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 79 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~--- 155 (271)
T PRK06505 79 LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN--- 155 (271)
T ss_pred HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc---
Confidence 5699999998532 245677899999999999999999988753 379999999866543221
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++...+++.++.+ +||||++|+||.+.|++.
T Consensus 156 -------------------~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~ 197 (271)
T PRK06505 156 -------------------YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAG 197 (271)
T ss_pred -------------------cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccc
Confidence 134899999999888888887 589999999999999874
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-27 Score=203.54 Aligned_cols=210 Identities=25% Similarity=0.322 Sum_probs=154.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+.|+||||||+||||++++++|+++|++|++++|...... ........ ..+++++..|+.+. .+.++|+|||+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~-~~~~~~~~-~~~~~~~~~Di~~~-----~~~~~D~ViHl 191 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRK-ENLVHLFG-NPRFELIRHDVVEP-----ILLEVDQIYHL 191 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccH-hHhhhhcc-CCceEEEECccccc-----cccCCCEEEEC
Confidence 3478999999999999999999999999999998643221 11111111 24678889998764 24579999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
|+.... ....++.+.+++|+.++.++++++.+. + .++|++||. .+|+... ..+.+|+.+.... +......|
T Consensus 192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g-~r~V~~SS~-~VYg~~~----~~p~~E~~~~~~~-p~~p~s~Y 263 (436)
T PLN02166 192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-G-ARFLLTSTS-EVYGDPL----EHPQKETYWGNVN-PIGERSCY 263 (436)
T ss_pred ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-C-CEEEEECcH-HHhCCCC----CCCCCccccccCC-CCCCCCch
Confidence 986432 223456788999999999999999887 5 489999998 4555432 1223343221100 11123569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+.+|..+|.+++.+.+.+++++.++||+++|||..... ...+..++.+.+.++ +++++.+.|+|+|
T Consensus 264 g~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~ 333 (436)
T PLN02166 264 DEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQY 333 (436)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEE
Confidence 99999999999999888899999999999999986432 224556777787777 6789999999998
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=195.55 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=138.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||++|||++++++|+++|++|++++|+... +..+.+.....++.++++|+++.+++.++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP---ETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHH---HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999886432 2222232234578899999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.++|++.+++|+.++.++++++.+.+ + .++||++||..+..+...
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------- 152 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--------- 152 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---------
Confidence 4799999998532 23467889999999999999999988753 2 369999999876644322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||++.|++..
T Consensus 153 -------------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~ 195 (251)
T PRK12481 153 -------------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTA 195 (251)
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchh
Confidence 134999999999999888886 5999999999999998754
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=192.90 Aligned_cols=173 Identities=19% Similarity=0.148 Sum_probs=134.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-CCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|+++||||+||||+++++.|+++|++|++..+ +.+.. .+...++.....++..+++|+++.+++..+++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 56799999999999999999999999999988754 33322 12233333334567889999999887765442
Q ss_pred -------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.+++++++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 154 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD------ 154 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC------
Confidence 589999999853 223445678999999999999999998875 3479999999976643321
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.||+..
T Consensus 155 ----------------~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~ 197 (252)
T PRK12747 155 ----------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNA 197 (252)
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhh
Confidence 144999999999999998887 4899999999999999754
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=202.09 Aligned_cols=210 Identities=21% Similarity=0.267 Sum_probs=153.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|+||||||+||||++++++|+++|++|++++|............. ...+++++.+|+.+. ++.++|+|||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~-----~l~~~D~ViHl 190 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEP-----ILLEVDQIYHL 190 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccCh-----hhcCCCEEEEe
Confidence 66899999999999999999999999999999876432211111111 124678889998765 34579999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
|+.... ....++.+.+++|+.++.++++++.+. + .++|++||.. .|+... ..+.+|+.+.... +......|
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g-~r~V~~SS~~-VYg~~~----~~p~~E~~~~~~~-P~~~~s~Y 262 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G-ARFLLTSTSE-VYGDPL----QHPQVETYWGNVN-PIGVRSCY 262 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-C-CEEEEECChH-HhCCCC----CCCCCccccccCC-CCCccchH
Confidence 986432 223456789999999999999999887 5 4899999984 454332 1223333221110 11113569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC-cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+.+|.++|.++..+.+.++++++++||+.++||...... ..+..++.+.+.++ +++++.+.|+|+|
T Consensus 263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~ 332 (442)
T PLN02206 263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 332 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEe
Confidence 999999999999888888999999999999999854322 23456667777766 6789999999998
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=193.56 Aligned_cols=210 Identities=21% Similarity=0.253 Sum_probs=155.7
Q ss_pred EEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 85 (232)
+||||||+|+||++++++|++.| ++|++++|.......+..+.+.. ..++.++.+|++|++++.+++++ +|+|||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence 48999999999999999999987 78988876432111122222221 24678899999999999999987 899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+|+.... ...+.++..+++|+.++.++++++.+.+...++|++||... ++.... ..+.+|.....| ...
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v-~g~~~~---~~~~~e~~~~~~------~~~ 149 (317)
T TIGR01181 80 FAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEV-YGDLEK---GDAFTETTPLAP------SSP 149 (317)
T ss_pred cccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccce-eCCCCC---CCCcCCCCCCCC------CCc
Confidence 9986532 33456778899999999999999988633348999999854 443221 112333332222 245
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|+.+|..+|.+++.++.+.+++++++||+.++||..... ...+.++.+...+. +++++.+.|+|+|
T Consensus 150 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 218 (317)
T TIGR01181 150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLY 218 (317)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEE
Confidence 999999999999999888999999999999999975433 34455666666665 5688999999997
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=192.63 Aligned_cols=173 Identities=18% Similarity=0.131 Sum_probs=138.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||.+++++|+++|++|++++|++++.. +..+++.....++.++++|+++.+++.++++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD-QLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG 82 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999875432 2333333334578899999999999888876
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceec-cCCCCCCCccccc
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAML-LNETPMTPDVVID 148 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~-~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.++++..+++|+.+++++++++.+.+ +.++||++||..+.. +.+.
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--------- 153 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG--------- 153 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCC---------
Confidence 5799999998532 23446678999999999999999887753 346899999986542 2111
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ||++++|+||++.|++..
T Consensus 154 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 196 (254)
T PRK07478 154 -------------MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGR 196 (254)
T ss_pred -------------cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccc
Confidence 1449999999999999988874 799999999999999653
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=196.13 Aligned_cols=174 Identities=13% Similarity=0.120 Sum_probs=138.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.+... +..+++.....++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALD-RAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56789999999999999999999999999999999865432 2333333334568889999999999988876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc------cEEEEecccceeccCCCCCCCc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI------KRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~------~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+ .. +++|++||..+.++.+.
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----- 157 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA----- 157 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-----
Confidence 4799999999643 23456778889999999999999987653 22 68999999877654322
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-----CCcEEEEccCceeCCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-----~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.++ ++++++++||++.|+....
T Consensus 158 -----------------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~ 203 (287)
T PRK06194 158 -----------------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS 203 (287)
T ss_pred -----------------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence 1449999999999999888763 5899999999999987543
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=194.59 Aligned_cols=215 Identities=21% Similarity=0.230 Sum_probs=156.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhc-CCCCceEEEEcCCCCcchHHHhhc--C
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELD-GATERLHLFKANLLEEGSFDSAVD--G 79 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~--~ 79 (232)
+|.+|+|+||||+|+||++++++|+++|++|++++|....... ....... ....+++++.+|++|.+++..+++ +
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 3567899999999999999999999999999999876532211 1111111 113468899999999999999886 6
Q ss_pred CCEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 80 CDGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 80 ~d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
+|+|||+|+.... .....+.+.+++|+.++.++++++.+. +.+++|++||. +.|+... ..+++|+....+
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~-~vyg~~~----~~~~~E~~~~~~--- 152 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSA-TVYGQPE----EVPCTEEFPLSA--- 152 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccH-HHhCCCC----CCCCCCCCCCCC---
Confidence 8999999985432 234567789999999999999998876 67899999997 5554322 234455543322
Q ss_pred cccchhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCCCCC--------CcchHHHHHHHHcCC-----CC----
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGN-----IY---- 220 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~~~~--------~~~~~~~~~~~~~~~-----~~---- 220 (232)
...|+.+|.++|.+++.++.. .+++++++||+.++|+..... ......++.++..++ .+
T Consensus 153 ---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 229 (352)
T PLN02240 153 ---TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDY 229 (352)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCC
Confidence 246999999999999988765 589999999999999754211 112334455554443 22
Q ss_pred --CCccceeeeec
Q 026852 221 --SAAIQDRIMIY 231 (232)
Q Consensus 221 --~~~~~~~~~~~ 231 (232)
.+|.+.|+|+|
T Consensus 230 ~~~~g~~~~~~i~ 242 (352)
T PLN02240 230 PTKDGTGVRDYIH 242 (352)
T ss_pred CCCCCCEEEeeEE
Confidence 37899999997
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=188.93 Aligned_cols=174 Identities=13% Similarity=0.133 Sum_probs=142.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+.+|++||||||++|+|++++.+|+++|+++++.|.+.+..+ +..++.... ++++.+.||+++.+++.+..+
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~-etv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNE-ETVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchH-HHHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999999999997665 344444433 489999999999999888765
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||.. .+.+++..++.+++|+.+.+.++++++|.| +.++||.++|+++..+...
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g--------- 182 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG--------- 182 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc---------
Confidence 569999999953 336678889999999999999999999975 5689999999988876543
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh------cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE------NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~------~~i~~~~v~pg~v~g~~~~ 201 (232)
. ..|+.||.++..+-+.+..| .||+.+.++|+.+.|++.+
T Consensus 183 -----l--------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~ 228 (300)
T KOG1201|consen 183 -----L--------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFD 228 (300)
T ss_pred -----c--------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccC
Confidence 2 33677777666666655544 4799999999999998876
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=195.69 Aligned_cols=213 Identities=21% Similarity=0.263 Sum_probs=153.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 85 (232)
++||||||+||||++++++|+++|++ |+++++............+. ...+++++.+|++|.+++.+++++ +|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 37999999999999999999999976 55455433211111122111 124578899999999999999974 899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhC--------CccEEEEecccceeccCCCCCCCc-------ccccc
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVH--------SIKRVVLTSSIGAMLLNETPMTPD-------VVIDE 149 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~iv~vSS~~~~~~~~~~~~~~-------~~~~e 149 (232)
+||.... .....++..+++|+.|+.++++++.+.+ +.+++|++||... |+.... ..+ ..++|
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v-yg~~~~-~~~~~~~~~~~~~~E 157 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV-YGDLPH-PDEVENSEELPLFTE 157 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh-cCCCCc-cccccccccCCCccc
Confidence 9986432 2334567899999999999999998752 3468999999844 443110 000 01233
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccce
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQD 226 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 226 (232)
+.... ....|+.||.++|.+++.++++++++++++||+.|+||..... ..++..+.+.+.++ +++++++.
T Consensus 158 ~~~~~------p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (352)
T PRK10084 158 TTAYA------PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQI 230 (352)
T ss_pred cCCCC------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeE
Confidence 32222 2356999999999999999888999999999999999985332 34566666677665 67889999
Q ss_pred eeeec
Q 026852 227 RIMIY 231 (232)
Q Consensus 227 ~~~~~ 231 (232)
|+|+|
T Consensus 231 ~~~v~ 235 (352)
T PRK10084 231 RDWLY 235 (352)
T ss_pred EeeEE
Confidence 99998
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=193.27 Aligned_cols=172 Identities=21% Similarity=0.193 Sum_probs=138.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||++|||+++++.|+++|++|++++|+ ++.. +..+++.....++.++++|+++.+++.++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVS-ETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHH-HHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 678999999999999999999999999999999998 3322 3344444334578899999999999888765
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... ..+.+.+++++++|+.++..+++++.+.+ ..++||++||..+..+.+.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 150 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY----------- 150 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC-----------
Confidence 4699999998532 12345678899999999999999998864 2379999999866643221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++.+
T Consensus 151 -----------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~ 193 (272)
T PRK08589 151 -----------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVD 193 (272)
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhh
Confidence 134999999999999998886 4899999999999999754
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=194.89 Aligned_cols=174 Identities=16% Similarity=0.148 Sum_probs=139.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc-hhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|++|||||+||||+++++.|+++|++|+++.|+.+... .+..+.+.....++.++++|++|.++++++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999998887654221 12233333334568899999999999888765
Q ss_pred -CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||.. .+.+.+.+++.+++|+.+++++++++.+.+ ..++||++||..++.+...
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 201 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT----------- 201 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC-----------
Confidence 579999999853 123567889999999999999999999875 3469999999876643222
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+..
T Consensus 202 -----------~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~ 244 (300)
T PRK06128 202 -----------LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP 244 (300)
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence 134999999999999998887 5999999999999999854
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=194.73 Aligned_cols=172 Identities=18% Similarity=0.172 Sum_probs=138.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|++.... +..+++.....++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLR-QAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999875432 2333444334568899999999999988875
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+.++..+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~---------- 152 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG---------- 152 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC----------
Confidence 469999999853 234556778899999999999999998753 2 478999999876644322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+.+.++.+ +||++++++||++.|++.
T Consensus 153 ------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 194 (275)
T PRK05876 153 ------------LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV 194 (275)
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence 245999999888888777766 489999999999999875
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-27 Score=191.30 Aligned_cols=178 Identities=22% Similarity=0.198 Sum_probs=140.5
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
||...+++|+++||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.+++.++++
T Consensus 1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (265)
T PRK07062 1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLA-SAEARLREKFPGARLLAARCDVLDEADVAAFAA 79 (265)
T ss_pred CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhhCCCceEEEEEecCCCHHHHHHHHH
Confidence 5666788999999999999999999999999999999999876443 222222221 2468899999999999887764
Q ss_pred -------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCC
Q 026852 79 -------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 -------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 155 (265)
T PRK07062 80 AVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH---- 155 (265)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC----
Confidence 469999999853 223455788999999999999999988864 3479999999876543221
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +||++++|+||++.||+..
T Consensus 156 ------------------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~ 198 (265)
T PRK07062 156 ------------------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWR 198 (265)
T ss_pred ------------------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhh
Confidence 134888888888888877776 5899999999999998753
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=190.26 Aligned_cols=175 Identities=20% Similarity=0.214 Sum_probs=142.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+.+|+++++|||||+|+||++++++|+++|++|++++|+++.. +..+++.....+++++++|+++.+++.++++
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 56678999999999999999999999999999999999987643 3334443335578999999999999988875
Q ss_pred ----CCCEEEEccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 ----GCDGVFHTASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|+||||||.... ...+++++.+++|+.++.++++.+.+.+ ..++||++||..+..+...
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------- 149 (258)
T PRK08628 79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGG--------- 149 (258)
T ss_pred HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCC---------
Confidence 57999999985321 2236778899999999999999988753 3468999999877654322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+ ++++++.|+||.++||+.
T Consensus 150 -------------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~ 191 (258)
T PRK08628 150 -------------TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLY 191 (258)
T ss_pred -------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHH
Confidence 134999999999999998875 589999999999999874
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=193.63 Aligned_cols=171 Identities=15% Similarity=0.129 Sum_probs=133.9
Q ss_pred CCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
.+++|+++||||+ +|||+++++.|+++|++|++++|+.... +.++++... ... .++++|++|.+++.++++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~--~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALK--KRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHH--HHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 3678999999997 8999999999999999999999985311 222222111 223 678999999999988875
Q ss_pred ----CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCc
Q 026852 79 ----GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||... +.+.+.++..+++|+.+++++++++.+.+ ..++||++||.++..+.+.
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~----- 153 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH----- 153 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc-----
Confidence 4699999999531 23456788999999999999999999975 3479999999866543221
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++...+.+.++.+ +||++++|+||+|.|++.
T Consensus 154 -----------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~ 195 (274)
T PRK08415 154 -----------------YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAA 195 (274)
T ss_pred -----------------chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence 134899999999998888876 589999999999999864
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=193.51 Aligned_cols=173 Identities=16% Similarity=0.139 Sum_probs=137.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhh-hhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHL-RELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|+.+....+.+ +.+.....++.++++|++|.+++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 678999999999999999999999999999998876532211222 2222234568889999999998887765
Q ss_pred -CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.+++++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~----------- 195 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH----------- 195 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC-----------
Confidence 469999999842 234567789999999999999999998864 3369999999876543221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 196 -----------~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~ 237 (294)
T PRK07985 196 -----------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ 237 (294)
T ss_pred -----------cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence 134999999999999999887 599999999999999975
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=197.03 Aligned_cols=174 Identities=13% Similarity=0.124 Sum_probs=140.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|+++||||+||||++++++|+++|++|++++|+++... +..+++.....++.++++|++|.+++.++++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~-~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ-AVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 477899999999999999999999999999999999875433 2333443334578889999999999988874
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~---------- 152 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY---------- 152 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC----------
Confidence 579999999842 234456678899999999999999988753 3579999999876644322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+...+.+.++.+ .+|++++|+||.+.||+..
T Consensus 153 ------------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~ 196 (330)
T PRK06139 153 ------------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFR 196 (330)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccc
Confidence 245999999988888888776 3799999999999999753
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=191.88 Aligned_cols=179 Identities=17% Similarity=0.124 Sum_probs=138.4
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc-
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
+|...+++|++|||||++|||++++++|+++|++|++++|+.........+++.. ...++.++++|++|+++++++++
T Consensus 1 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 1 NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 3566789999999999999999999999999999998876543221122222322 23578899999999999888765
Q ss_pred ------CCCEEEEcccccc-----------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCC
Q 026852 79 ------GCDGVFHTASPVI-----------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNE 138 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~ 138 (232)
++|++|||||... +.+.+.+.+.+++|+.++..+++.+.+.+ +.++||++||..+..+.+
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 160 (260)
T PRK08416 81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE 160 (260)
T ss_pred HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCC
Confidence 4799999997431 12345678899999999999999888764 346999999986553322
Q ss_pred CCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 139 TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 139 ~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
. ...|+.||++.+.+++.++.++ ||++++|+||++.|++..
T Consensus 161 ~----------------------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~ 204 (260)
T PRK08416 161 N----------------------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALK 204 (260)
T ss_pred C----------------------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhh
Confidence 1 1349999999999999998874 899999999999999743
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=190.04 Aligned_cols=179 Identities=19% Similarity=0.156 Sum_probs=143.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+..+++|+++||||+|+||++++++|+++|++|++++|++++.. ...+.+.....+++++++|+++.+++..+++
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 79 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGE-ETVALIREAGGEALFVACDVTRDAEVKALVEQTI 79 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 455688999999999999999999999999999999999876432 2233333334578999999999999888776
Q ss_pred ----CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+||||||... +.+.+++++.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------ 153 (253)
T PRK06172 80 AAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK------ 153 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------
Confidence 4599999998532 23456778899999999999998877642 3479999999876644322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.+|++.+.+++.++.++ |+++++++||.|.|++....
T Consensus 154 ----------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~ 198 (253)
T PRK06172 154 ----------------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA 198 (253)
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence 2449999999999999998874 89999999999999986543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=190.33 Aligned_cols=176 Identities=18% Similarity=0.189 Sum_probs=139.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.+....+..+++.....++.++++|++|++++.++++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 6789999999999999999999999999999999986533223334444334578899999999999888765
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.+.+++.+++|+.+++++++++.+.+ +.++||++||..+..+.+..
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------- 155 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL---------- 155 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC----------
Confidence 3699999998532 24456788999999999999999987753 34799999998766443210
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.+|++.+.+++.++.+ +|+++++|+||+++||+..
T Consensus 156 ----------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~ 199 (254)
T PRK06114 156 ----------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT 199 (254)
T ss_pred ----------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence 0134999999999998888876 5899999999999999753
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=198.16 Aligned_cols=197 Identities=22% Similarity=0.237 Sum_probs=163.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcC-
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDG- 79 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~- 79 (232)
.+++||+|+||||+|-||+++++++++.+- ++++++|++.+... ...++.. ...++.++-+|++|.+.+..++++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~-i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYL-IDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHH-HHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 457899999999999999999999999975 78888999875542 2222222 247789999999999999999998
Q ss_pred -CCEEEEccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 80 -CDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 80 -~d~vi~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
+|+|+|.|+.- .+.-+.+|.+.+.+|+.||.|+++++.+. +++++|++||..+++|.
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~Pt-------------------- 383 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVNPT-------------------- 383 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccCCc--------------------
Confidence 99999999853 34568899999999999999999999998 89999999999888653
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
+.||+||.++|.+...+.++. +.++++||.|+|.|+.. ..+|-|...+-+|+ ...|....|.|+.
T Consensus 384 -----NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTvTdp~mtRyfMT 453 (588)
T COG1086 384 -----NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTVTDPDMTRFFMT 453 (588)
T ss_pred -----hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccccCCCceeEEEE
Confidence 569999999999999887753 48999999999999983 33444444455555 8899999999973
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=190.18 Aligned_cols=174 Identities=18% Similarity=0.200 Sum_probs=139.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|++|||||+|+||++++++|+++|++|++++|++++.. +..+.+...+.++.++++|++|.+++.++++
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLA-AAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999999875432 2233333334568899999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.+|+|||+||... ..+.+.+++++++|+.++.++++++.+.+ +.++||++||.....+.+.
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---------- 155 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG---------- 155 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC----------
Confidence 3699999998532 23455678889999999999999998763 4579999999855433221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.+.|+...
T Consensus 156 ------------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~ 198 (255)
T PRK07523 156 ------------IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNA 198 (255)
T ss_pred ------------CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhh
Confidence 244999999999999888874 5999999999999999754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=189.16 Aligned_cols=161 Identities=18% Similarity=0.195 Sum_probs=134.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.... .++.++++|++|++++.++++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6789999999999999999999999999999999986431 257899999999999888775
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 140 (258)
T PRK06398 72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN----------- 140 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC-----------
Confidence 579999999852 234456788899999999999999998864 4579999999866543221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+.+.++.+. +|++++|+||++.||+.
T Consensus 141 -----------~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~ 181 (258)
T PRK06398 141 -----------AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLL 181 (258)
T ss_pred -----------CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHH
Confidence 2449999999999999998874 59999999999999865
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=189.47 Aligned_cols=173 Identities=17% Similarity=0.111 Sum_probs=135.7
Q ss_pred CCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
++++|+++||||+ +|||++++++|+++|++|++++|+.+.. +.++++........++++|++|.++++++++
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 84 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR--PYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE 84 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence 3688999999998 5999999999999999999999986422 2222222222335688999999999988765
Q ss_pred ---CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+++++.+++|+.++.++++.+.+.+. .++||++||..+..+.+.
T Consensus 85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~------ 158 (258)
T PRK07533 85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN------ 158 (258)
T ss_pred HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc------
Confidence 4699999998532 234567899999999999999999998763 368999999865433211
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++...+.+.++.+ +||+|++|+||.+.|++..
T Consensus 159 ----------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~ 201 (258)
T PRK07533 159 ----------------YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAAS 201 (258)
T ss_pred ----------------chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhh
Confidence 134899999999998888876 5899999999999998753
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-27 Score=189.47 Aligned_cols=174 Identities=14% Similarity=0.141 Sum_probs=140.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|++++.++++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAE-LAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999875432 2333443334567889999999999988765
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|+||||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------- 154 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT----------- 154 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC-----------
Confidence 479999999853 234567788999999999999999988753 3479999999865543221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.+ +||++++|+||+++|++...
T Consensus 155 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~ 198 (254)
T PRK08085 155 -----------ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKA 198 (254)
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhh
Confidence 134999999999999998877 49999999999999997644
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-27 Score=190.55 Aligned_cols=175 Identities=16% Similarity=0.192 Sum_probs=138.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|+.++.+ +..+++.....++.++++|++|++++.++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALE-KLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999999875432 2333343334578899999999999888765
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ + .++||++||..+..+...
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------- 155 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP---------- 155 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC----------
Confidence 6799999998532 24456788899999999999999988764 1 257999998855422110
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.....|+.+|++.+.+++.++.+ +||++++|+||.+.||+..
T Consensus 156 ----------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~ 200 (253)
T PRK05867 156 ----------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE 200 (253)
T ss_pred ----------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc
Confidence 00134999999999999998877 4899999999999999754
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=189.14 Aligned_cols=174 Identities=16% Similarity=0.096 Sum_probs=135.3
Q ss_pred CCCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 3 SGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
+..+++|+++||||++ |||+++++.|+++|++|++.+|+.. .. +.++++........++++|++|+++++++++
T Consensus 3 ~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~-~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~ 80 (260)
T PRK06603 3 TGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LE-KRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI 80 (260)
T ss_pred CcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HH-HHHHHHHHhcCCceEEEccCCCHHHHHHHHHHH
Confidence 4558899999999997 9999999999999999999988742 11 2233332221223467999999999988875
Q ss_pred -----CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCC
Q 026852 79 -----GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||... +.+.+.|++.+++|+.+++.+++.+.+.+. .++||++||..+..+.+.
T Consensus 81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~---- 156 (260)
T PRK06603 81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPN---- 156 (260)
T ss_pred HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCc----
Confidence 4799999998531 234567889999999999999999888753 379999999866533221
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ +||+|++|+||.+.|++.
T Consensus 157 ------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~ 198 (260)
T PRK06603 157 ------------------YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLAS 198 (260)
T ss_pred ------------------ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhh
Confidence 134899999999888888886 589999999999999864
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-27 Score=189.59 Aligned_cols=173 Identities=16% Similarity=0.111 Sum_probs=137.1
Q ss_pred CCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCc-chhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
+++|+++||||+ +|||++++++|+++|++|++..|+.+.. ..+.++++.....+..++++|++|.+++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 678999999986 8999999999999999999888765421 123344443333456789999999999988775
Q ss_pred ---CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+.|++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------ 157 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN------ 157 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc------
Confidence 4699999998531 234567899999999999999999998753 379999999866543221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ +||+|++|+||++.|++.
T Consensus 158 ----------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~ 199 (258)
T PRK07370 158 ----------------YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLAS 199 (258)
T ss_pred ----------------cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchh
Confidence 244999999999999999887 489999999999999864
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=189.23 Aligned_cols=169 Identities=19% Similarity=0.167 Sum_probs=135.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
.+|++|||||+||||++++++|+++|++|++++|++++.. .+.. ....++.++++|++|.+++.++++ +
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~l~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA--DFEA--LHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH--HHHh--hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4589999999999999999999999999999999875321 1111 123468899999999999988876 4
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~------------ 146 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG------------ 146 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC------------
Confidence 799999998532 23345667889999999999999987743 4579999999876654322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.++|++..
T Consensus 147 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~ 189 (277)
T PRK06180 147 ----------IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG 189 (277)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence 245999999999999888876 5999999999999998643
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=182.52 Aligned_cols=211 Identities=23% Similarity=0.314 Sum_probs=167.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
..+++|+||||+||||+|+++.|..+|+.|+++|.-..+.. +.+ +......+++.+..|+..+ ++.++|.|+|
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k-~n~-~~~~~~~~fel~~hdv~~p-----l~~evD~Iyh 97 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRK-ENL-EHWIGHPNFELIRHDVVEP-----LLKEVDQIYH 97 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccch-hhc-chhccCcceeEEEeechhH-----HHHHhhhhhh
Confidence 45689999999999999999999999999999986544322 111 1222245677777777655 7778999999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+|++..+ .....+.+++.+|+.++.+.+..+.+. + +|+++.||+ .+||.+. +.+..|..|.... +.....+
T Consensus 98 LAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTs-eVYgdp~----~hpq~e~ywg~vn-pigpr~c 169 (350)
T KOG1429|consen 98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTS-EVYGDPL----VHPQVETYWGNVN-PIGPRSC 169 (350)
T ss_pred hccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecc-cccCCcc----cCCCccccccccC-cCCchhh
Confidence 9998765 345677899999999999999999887 3 899999999 7888755 4444555554432 2345677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc-chHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|...|.++|.++..|.++.||.+-++|+.++|||+..-... ..+.++.+.++++ +|++|+|.|.|.|
T Consensus 170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~y 240 (350)
T KOG1429|consen 170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQY 240 (350)
T ss_pred hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEe
Confidence 99999999999999999999999999999999998765444 4566677788888 9999999999987
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=186.79 Aligned_cols=173 Identities=17% Similarity=0.133 Sum_probs=135.5
Q ss_pred CCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-
Q 026852 4 GEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
..+++|+++||||+ +|||++++++|+++|++|++++|+.... +.++++.. ...++.++++|++|.+++.++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE--KEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch--HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 35788999999997 8999999999999999999998864321 22222211 13568899999999999988765
Q ss_pred ------CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCC
Q 026852 79 ------GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~ 142 (232)
++|++|||||... +.+.+.+...+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--- 157 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN--- 157 (257)
T ss_pred HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC---
Confidence 4699999998532 233456778899999999999999998753 479999999876543221
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ +||+|++|+||.+.|++.
T Consensus 158 -------------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~ 199 (257)
T PRK08594 158 -------------------YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSA 199 (257)
T ss_pred -------------------CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhH
Confidence 134999999999999888876 489999999999999864
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-26 Score=206.79 Aligned_cols=216 Identities=20% Similarity=0.269 Sum_probs=157.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--cCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--DGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d 81 (232)
.++|+||||||+||||++++++|+++ +++|++++|.........+... ....+++++.+|++|.+.+..++ .++|
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 82 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGID 82 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence 46689999999999999999999998 6889988875321111111111 11346899999999999888765 5799
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||+|+.... ....++.+.+++|+.++.++++++.+....+++|++||.. .|+..... +....+|+....
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~-vyg~~~~~-~~~~~~E~~~~~------ 154 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDED-ADVGNHEASQLL------ 154 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchH-HhCCCccc-cccCccccCCCC------
Confidence 99999986432 2233456788999999999999998873378999999984 45433210 001112222211
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+...|+.+|.++|.+++.+.++++++++++||++|+||..... ..++.++.....++ +++++.+.|+|+|
T Consensus 155 p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ih 227 (668)
T PLN02260 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLY 227 (668)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEE
Confidence 1245999999999999998888899999999999999986432 24455566666666 6689999999998
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=190.95 Aligned_cols=173 Identities=18% Similarity=0.167 Sum_probs=138.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.+... +..+++.. ..+++++++|++|.+++.++++
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQ-NVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999764322 22333322 3568899999999999988876
Q ss_pred --CCCEEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... +.+.++++.++++|+.++.++++++.+.+ ..+++|++||..+.++...
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------- 164 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG------- 164 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC-------
Confidence 5899999998532 13346778999999999999999988753 3468999999877654322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. |+++++++||.+.|++.
T Consensus 165 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~ 206 (280)
T PLN02253 165 ---------------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALA 206 (280)
T ss_pred ---------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccc
Confidence 1349999999999999998874 89999999999999864
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=187.82 Aligned_cols=173 Identities=18% Similarity=0.172 Sum_probs=138.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+. +.. +..+.+.....++.++++|+++.+++.++++
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWD-ETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999983 221 2222233334578899999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 159 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF---------- 159 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC----------
Confidence 5799999998532 23455778999999999999999988753 3579999999866543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++|+||.+.|+...
T Consensus 160 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~ 202 (258)
T PRK06935 160 ------------VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTA 202 (258)
T ss_pred ------------chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchh
Confidence 134999999999999998887 4899999999999999754
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=188.14 Aligned_cols=172 Identities=16% Similarity=0.155 Sum_probs=134.8
Q ss_pred CCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
++++|+++||||++ |||+++++.|+++|++|++.+|+.. . .+.++++........++++|++|+++++++++
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L-KGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-H-HHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 37889999999986 9999999999999999999988732 1 13334443333456789999999999998875
Q ss_pred ---CCCEEEEcccccc----------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCc
Q 026852 79 ---GCDGVFHTASPVI----------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||... +.+.+.++..+++|+.++..+++++.+.+ ..++||++||.++..+.+.
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~----- 155 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN----- 155 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC-----
Confidence 4699999998532 12345677889999999999999987753 3478999999866433221
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|++||.+.+.+++.++.+ +||+|++|+||++.|++.
T Consensus 156 -----------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~ 197 (262)
T PRK07984 156 -----------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA 197 (262)
T ss_pred -----------------cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHH
Confidence 134999999999999999887 589999999999999854
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=187.25 Aligned_cols=173 Identities=17% Similarity=0.141 Sum_probs=138.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|+++||||+||||++++++|++.|++|++++|+... +..+.+.....++.++++|++|.+++.++++
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT---ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE 82 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchH---HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34788999999999999999999999999999988776432 2223333224568899999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ + .++||++||..+..+...
T Consensus 83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 154 (253)
T PRK08993 83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR-------- 154 (253)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC--------
Confidence 4799999998532 24456789999999999999999988753 1 368999999866543221
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +||+++.++||++.|++..
T Consensus 155 --------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~ 197 (253)
T PRK08993 155 --------------VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQ 197 (253)
T ss_pred --------------CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchh
Confidence 134999999999999888887 5899999999999999754
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=191.43 Aligned_cols=172 Identities=20% Similarity=0.157 Sum_probs=136.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC---------CCcchhhhhhhcCCCCceEEEEcCCCCcchHHH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---------NSPKTEHLRELDGATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (232)
.+++|++|||||++|||+++++.|+++|++|++++|+. +.. .+..+++.....++.++++|++|.+++.+
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAA-QAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHH-HHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 47889999999999999999999999999999998875 211 12333444445578899999999999888
Q ss_pred hhc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC---------ccEEEEeccccee
Q 026852 76 AVD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS---------IKRVVLTSSIGAM 134 (232)
Q Consensus 76 ~~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~vSS~~~~ 134 (232)
+++ ++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+.+. .++||++||..+.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~ 161 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL 161 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence 764 569999999853 2345677899999999999999999876531 2589999998776
Q ss_pred ccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 135 LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
.+.+. ...|+.||++.+.+.+.++.+ +||+|++|+|| +.|++.
T Consensus 162 ~~~~~----------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~ 207 (286)
T PRK07791 162 QGSVG----------------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT 207 (286)
T ss_pred cCCCC----------------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc
Confidence 54332 134999999999999888887 58999999999 777763
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=192.78 Aligned_cols=186 Identities=18% Similarity=0.114 Sum_probs=141.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|+++||||++|||++++++|+++|++|++++|+.++.. +..+++.. ...++.++++|++|.+++.++++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGE-AAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999876433 23333322 13468899999999999988865
Q ss_pred ---CCCEEEEcccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 ---GCDGVFHTASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... ..+.+.++.++++|+.++..+++.+.+.+ ..++||++||..+..+... + + .+.+
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~-~--~-~~~~ 165 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAIN-W--D-DLNW 165 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcC-c--c-cccc
Confidence 4799999999642 23557889999999999999999998754 3479999999876654211 0 1 1111
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~ 201 (232)
... + .....|+.||.+...+.+.++++ .||++++++||+|.|++..
T Consensus 166 ~~~----~--~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~ 216 (313)
T PRK05854 166 ERS----Y--AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA 216 (313)
T ss_pred ccc----C--cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence 110 0 11245999999999999988764 4799999999999998764
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=195.16 Aligned_cols=177 Identities=18% Similarity=0.140 Sum_probs=141.7
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
||...+++++++||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 1 ~~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~-~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~ 79 (334)
T PRK07109 1 MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLE-ALAAEIRAAGGEALAVVADVADAEAVQAAADRA 79 (334)
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4556788899999999999999999999999999999999875432 2333333334678899999999999988765
Q ss_pred -----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.++..+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~------ 153 (334)
T PRK07109 80 EEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL------ 153 (334)
T ss_pred HHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc------
Confidence 579999999852 234567788999999999999998887764 3478999999977644322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+.+.++.+ .+|++++|+||.+.||+.
T Consensus 154 ----------------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~ 197 (334)
T PRK07109 154 ----------------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF 197 (334)
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh
Confidence 245999999998888887765 369999999999999864
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=189.72 Aligned_cols=173 Identities=24% Similarity=0.230 Sum_probs=138.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||+++++.|+++|++|++++|+.+... +..+++.....++.++++|+++.+++..+++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAE-AVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999865332 2333343334578899999999998887765
Q ss_pred CCCEEEEcccccc--------------------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceec
Q 026852 79 GCDGVFHTASPVI--------------------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAML 135 (232)
Q Consensus 79 ~~d~vi~~Ag~~~--------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~ 135 (232)
++|++|||||... +.+.+++++.+++|+.++..+++.+.+.+ +.++||++||..+..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 6799999998431 12345678899999999999998887753 357899999997664
Q ss_pred cCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 136 LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
+.+. ...|+.||++.+.+++.++.++ |+++++|+||+|.||+.+
T Consensus 167 ~~~~----------------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~ 213 (278)
T PRK08277 167 PLTK----------------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNR 213 (278)
T ss_pred CCCC----------------------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchh
Confidence 3222 1349999999999999988874 899999999999999643
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=188.95 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=133.8
Q ss_pred CCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|+++|||| ++|||+++++.|+++|++|++++|+... .+.++++.........+++|++|+++++++++
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL--EERVRKMAAELDSELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH--HHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH
Confidence 378899999997 7799999999999999999998876321 13333443222345678999999999998875
Q ss_pred ---CCCEEEEccccccc----------CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCC
Q 026852 79 ---GCDGVFHTASPVIF----------LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||.... .+.+.++..+++|+.++.++++++.+.+ ..++||++||.++..+.+.
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~---- 156 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN---- 156 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC----
Confidence 57999999986421 2334677889999999999999988864 2368999999876543222
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||+|++|+||+|.|++..
T Consensus 157 ------------------~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~ 199 (261)
T PRK08690 157 ------------------YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS 199 (261)
T ss_pred ------------------cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh
Confidence 134999999999988888775 5899999999999998743
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=188.59 Aligned_cols=165 Identities=24% Similarity=0.293 Sum_probs=133.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
++|+++||||+||||++++++|+++|++|++++|++++. +++.. .+++++++|++|.+++.++++ +
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-----~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~ 74 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-----EDLAS--LGVHPLSLDVTDEASIKAAVDTIIAEEGR 74 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHh--CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 568999999999999999999999999999999987532 22221 247889999999999988876 6
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|++|||||... +.+.+.++..+++|+.++.++++.+++.+ +.++||++||..+..+.+.
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------ 142 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL------------ 142 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC------------
Confidence 899999998532 23456788999999999999988887753 4579999999865433221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
..+|+.||.+.+.+.+.++.+ +|+++++++||++.||+.
T Consensus 143 ----------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 143 ----------GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG 184 (273)
T ss_pred ----------ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence 245999999999998887765 599999999999999975
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=186.33 Aligned_cols=172 Identities=15% Similarity=0.173 Sum_probs=136.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|.+++++|+++||||+||||+++++.|+++|++|+++.|+... ..+++.. .++.++++|++|++++.++++
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~----~~~~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN----EAKELRE--KGVFTIKCDVGNRDQVKKSKEVVE 74 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH----HHHHHHh--CCCeEEEecCCCHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999988776532 2222222 147889999999999988875
Q ss_pred ----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... ..+.++++..+++|+.++.++++.+.+.+ +.++||++||..+..+...
T Consensus 75 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------- 147 (255)
T PRK06463 75 KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE------- 147 (255)
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC-------
Confidence 5799999998532 23456788999999999999998887753 3579999999866532111
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
....|+.||++.+.+++.++.+ +||++++++||++.|++.
T Consensus 148 --------------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~ 190 (255)
T PRK06463 148 --------------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMT 190 (255)
T ss_pred --------------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchh
Confidence 0144999999999999998876 489999999999999875
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=188.07 Aligned_cols=164 Identities=24% Similarity=0.274 Sum_probs=134.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-------
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------- 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 79 (232)
++++++||||+||||++++++|+++|++|++++|++++... ..+++++++|++|++++++++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999998754321 23578999999999999998864
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|++|||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 141 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY------------ 141 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC------------
Confidence 699999999642 23456678999999999999999987643 5689999999866543222
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++.+ +|+++++++||++.|++..
T Consensus 142 ----------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~ 184 (270)
T PRK06179 142 ----------MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA 184 (270)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence 245999999999999888766 5999999999999998754
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=186.50 Aligned_cols=170 Identities=17% Similarity=0.213 Sum_probs=138.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGA-AVAASL---GERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999999875332 122222 3468899999999999988775
Q ss_pred CCCEEEEcccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 79 GCDGVFHTASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 79 ~~d~vi~~Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
.+|++|||||... ..+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------- 146 (261)
T PRK08265 80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG------------- 146 (261)
T ss_pred CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC-------------
Confidence 4699999998532 23456778999999999999999988764 3479999999877654332
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ +||++++|+||++.|++..
T Consensus 147 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~ 189 (261)
T PRK08265 147 ---------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMD 189 (261)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhh
Confidence 234999999999999888876 4899999999999998743
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=188.37 Aligned_cols=174 Identities=17% Similarity=0.090 Sum_probs=135.6
Q ss_pred CCCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 3 SGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
+..|++|++|||||+ +|||+++++.|+++|++|++++|+... .+.++++.........+++|++|+++++++++
T Consensus 5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL--KKRVEPLAAELGAFVAGHCDVTDEASIDAVFETL 82 (272)
T ss_pred cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH--HHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHH
Confidence 345788999999997 899999999999999999998886321 12233332222335678999999999998865
Q ss_pred -----CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCC
Q 026852 79 -----GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||... +.+.+.++..+++|+.++.++++.+.+.+ ..++||++||.++..+.+.
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~---- 158 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH---- 158 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc----
Confidence 4699999998532 23456789999999999999999998875 3479999999765433221
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++...+++.++.+ +||++++|+||++.|++.
T Consensus 159 ------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~ 200 (272)
T PRK08159 159 ------------------YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAA 200 (272)
T ss_pred ------------------chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHH
Confidence 134999999999999988887 489999999999999754
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=189.30 Aligned_cols=178 Identities=20% Similarity=0.100 Sum_probs=135.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc---------chhhhhhhcCCCCceEEEEcCCCCcchHH
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP---------KTEHLRELDGATERLHLFKANLLEEGSFD 74 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 74 (232)
..+++|+++||||++|||++++++|+++|++|++++|+.... ..+..+.+.....++.++++|++++++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 347889999999999999999999999999999999985321 11222333333456788999999999998
Q ss_pred Hhhc-------CCCEEEEcc-ccc------c---cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEeccccee
Q 026852 75 SAVD-------GCDGVFHTA-SPV------I---FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAM 134 (232)
Q Consensus 75 ~~~~-------~~d~vi~~A-g~~------~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~ 134 (232)
++++ ++|++|||| |.. . +.+.+.+++.+++|+.+++.+++++.+.+ +.++||++||..+.
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~ 163 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence 8765 479999999 631 1 12345677889999999999999998875 24799999997543
Q ss_pred ccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 135 LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
..... . .....|+.||.+...+.+.++.+ +||++++|+||+|.||+.
T Consensus 164 ~~~~~--------------~-----~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~ 213 (305)
T PRK08303 164 YNATH--------------Y-----RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMM 213 (305)
T ss_pred ccCcC--------------C-----CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHH
Confidence 22110 0 00134899999999888888887 489999999999999863
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=185.52 Aligned_cols=171 Identities=20% Similarity=0.182 Sum_probs=136.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+|+||++++++|+++|++|++++|+... ...+.+.....++.++++|+++.+++..+++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS---ETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH---HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 688999999999999999999999999999999987531 2222222224568899999999999887764
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ + .+++|++||..+..+...
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------- 149 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR---------- 149 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC----------
Confidence 5799999998532 23345678889999999999999987753 2 469999999866543211
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++++. |+++++++||++.|++..
T Consensus 150 ------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~ 192 (248)
T TIGR01832 150 ------------VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQ 192 (248)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchh
Confidence 1349999999999999998884 899999999999999754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=186.21 Aligned_cols=171 Identities=19% Similarity=0.215 Sum_probs=135.9
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|++|||||+||||+++++.|+++|++|++++|+++... ....++.....++.++++|+++++++.++++ ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQ-AAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999999999999875432 2233333334568899999999998888765 57
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
|++|||||... ..+.+.+++.+++|+.++.++++.+.+.+ ..++||++||..+.++.+.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 148 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE------------ 148 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC------------
Confidence 99999998532 23345678899999999999998887753 2368999999876654322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++|+||++.||+..
T Consensus 149 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~ 191 (256)
T PRK08643 149 ----------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF 191 (256)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh
Confidence 144999999999998888876 5899999999999999753
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=186.68 Aligned_cols=170 Identities=19% Similarity=0.201 Sum_probs=136.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|+.+... ...+.+ ..+++++++|++|.+++.++++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR-LAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999875432 122222 2458899999999999988876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++||+||... +.+.+++++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 149 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL---------- 149 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC----------
Confidence 4799999998532 23456788899999999999999998753 2368999999866544322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+++||+.+
T Consensus 150 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~ 192 (257)
T PRK07067 150 ------------VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWD 192 (257)
T ss_pred ------------CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhh
Confidence 244999999999999888875 6999999999999999754
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=189.88 Aligned_cols=174 Identities=20% Similarity=0.199 Sum_probs=139.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||+++++.|+++|++|++++|++++.. +..+++.. ...+..+++|++|.+++.++++
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~-~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELA-ALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478899999999999999999999999999999999875432 22233322 3456778899999999888764
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|+||||||.. .+.+.+.+++.+++|+.++.++++.+.+.+ ..++||++||..+..+.+.
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 152 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG----------- 152 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC-----------
Confidence 579999999953 234556778999999999999999998863 3479999999877654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+.+.++.+ +||++++++||++.|++...
T Consensus 153 -----------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~ 196 (296)
T PRK05872 153 -----------MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRD 196 (296)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhh
Confidence 244999999999999888765 59999999999999997543
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=187.05 Aligned_cols=177 Identities=20% Similarity=0.158 Sum_probs=137.3
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG- 79 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~- 79 (232)
||+ ++++|++|||||+|+||+++++.|+++|++|++++|++++.. +..+.+.....++.++++|++|.+++.+++++
T Consensus 1 ~~~-~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 1 MMS-NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGAN-AVADEINKAGGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred Ccc-cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHhcCceEEEEECCCCCHHHHHHHHHHH
Confidence 454 467899999999999999999999999999999999885432 33333433345688899999999999887763
Q ss_pred ------CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCc
Q 026852 80 ------CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 80 ------~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
+|+||||||... ..+.+.+++.+++|+.++..+++.+.+.+ +.++||++||..+..+.+.
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~----- 153 (262)
T PRK13394 79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL----- 153 (262)
T ss_pred HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC-----
Confidence 799999998642 23345677889999999877777765542 4579999999865543221
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ .++++++++||.++||...
T Consensus 154 -----------------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~ 196 (262)
T PRK13394 154 -----------------KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD 196 (262)
T ss_pred -----------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh
Confidence 134889999888888888776 5899999999999999753
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=196.58 Aligned_cols=223 Identities=18% Similarity=0.209 Sum_probs=155.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCC---CeEEEEEcCCCCcch-hhhh-hhc-------------CC-----CCce
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKT-EHLR-ELD-------------GA-----TERL 60 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~~-~~~~-~~~-------------~~-----~~~~ 60 (232)
..+++|+|||||||||+|+++++.|++.+ .+|+++.|..+.... +.+. ++. .. ..++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 45789999999999999999999999864 367889998764332 1211 110 00 1578
Q ss_pred EEEEcCCC-------CcchHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccce
Q 026852 61 HLFKANLL-------EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGA 133 (232)
Q Consensus 61 ~~~~~D~~-------~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~ 133 (232)
+++.+|++ +.+.+..+++++|+|||+|+.... .++++..+++|+.|+.++++++.+..+.+++|++||..
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~- 163 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF--DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY- 163 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC--cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE-
Confidence 99999998 444567788899999999986542 34678899999999999999998764678999999984
Q ss_pred eccCCCCCCCccccccCC-C----------------------------------------CChhhccccchhHHHHHHHH
Q 026852 134 MLLNETPMTPDVVIDETW-F----------------------------------------SNPVLCKENKEWYSLAKTLA 172 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~e~~-~----------------------------------------~~~~~~~~~~~~y~~sK~~~ 172 (232)
.++......++.+.++.. + ..+.......+.|+.||+++
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 444322111111111100 0 00111112345699999999
Q ss_pred HHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcch------HHHHHHHHcCC---CCCCccceeeeec
Q 026852 173 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG------AEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 173 ~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|.++..++ .+++++++||++|+||...+....+ ..++.....|. .++++.+.|||+|
T Consensus 244 E~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~ 309 (491)
T PLN02996 244 EMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIP 309 (491)
T ss_pred HHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceec
Confidence 99997764 3899999999999999876643322 22333344454 7889999999987
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=187.27 Aligned_cols=165 Identities=22% Similarity=0.295 Sum_probs=131.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--------C
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------G 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~ 79 (232)
+|+++||||+||||++++++|+++|++|++++|+++.. +++.. ..++++++|++|.++++.+++ .
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-----~~l~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-----AALEA--EGLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHH--CCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999987532 22221 247889999999998877765 4
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|++|||||... +.+.+.++..+++|+.|+.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------ 144 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY------------ 144 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc------------
Confidence 699999998532 23445678899999999888888877753 4579999999866543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||++.|++.+
T Consensus 145 ----------~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~ 187 (277)
T PRK05993 145 ----------RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRA 187 (277)
T ss_pred ----------cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhh
Confidence 245999999999999888765 5999999999999998754
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=185.31 Aligned_cols=203 Identities=29% Similarity=0.401 Sum_probs=155.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC-CEEEEccc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC-DGVFHTAS 88 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-d~vi~~Ag 88 (232)
.||||||+||||+++++.|+++|++|++++|...+..... ..+.++.+|+++.+.+..+++.+ |+|||+|+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa 73 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA 73 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence 4999999999999999999999999999999876543200 46789999999998898888888 99999998
Q ss_pred ccccCCC-C-chhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCC-CCChhhccccchhH
Q 026852 89 PVIFLSD-N-PQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW-FSNPVLCKENKEWY 165 (232)
Q Consensus 89 ~~~~~~~-~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~y 165 (232)
....... . ++.+.+++|+.++.++++++.+. +.+++|+.||...+++. . ...+.+|+. ...| ...|
T Consensus 74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~-~---~~~~~~E~~~~~~p------~~~Y 142 (314)
T COG0451 74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGD-P---PPLPIDEDLGPPRP------LNPY 142 (314)
T ss_pred cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCC-C---CCCCcccccCCCCC------CCHH
Confidence 6543211 1 45678999999999999999995 88999997777555543 1 122444543 2221 1269
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc--chHHHHHHHHcCC----CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
+.||.++|.++..+...++++++++||+.++||+...... ....++.+...+. ..+++.+.|+|+|
T Consensus 143 g~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 214 (314)
T COG0451 143 GVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY 214 (314)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEe
Confidence 9999999999999888789999999999999999766532 2333444444444 4557788899987
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=186.25 Aligned_cols=174 Identities=21% Similarity=0.198 Sum_probs=138.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++...+ +..+++.....+++++.+|++|.+++..+++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLD-EVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 356799999999999999999999999999999999875432 2333333334568999999999999887764
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+|||+||... ..+.+.++..+++|+.++..+++++.+.+ ..++||++||.....+.+.
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------- 150 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK---------- 150 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC----------
Confidence 5799999998532 23456778999999999999999998753 2369999999866543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +++++++++||+++||...
T Consensus 151 ------------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 193 (258)
T PRK07890 151 ------------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLK 193 (258)
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHH
Confidence 134999999999999988876 4899999999999998743
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=185.32 Aligned_cols=178 Identities=18% Similarity=0.144 Sum_probs=138.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|+++||||+|+||+++++.|+++|+.|+++.|+.........+++.....++.++++|++|.+++.++++
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 45568899999999999999999999999999999988865432222333343334568899999999999888765
Q ss_pred ----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... ..+.+.+++.+++|+.+++++++.+.+.+ ..++||++||..+..+.+.
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~------ 154 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL------ 154 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC------
Confidence 4799999998532 23446678899999999999888876653 2479999999855433221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ .||++++|+||.++||+..
T Consensus 155 ----------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~ 197 (261)
T PRK08936 155 ----------------FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA 197 (261)
T ss_pred ----------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence 134999999999888888776 4899999999999999754
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-26 Score=185.82 Aligned_cols=176 Identities=19% Similarity=0.140 Sum_probs=140.0
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
...++++++|||||+||||++++++|+++|++|++++|++++.+ +..+.+.....+++++++|+++.+++.++++
T Consensus 5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLD-EVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 33478899999999999999999999999999999999865432 2223333334578899999999999887765
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+|||+||.. .+.+.+.++.++++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------- 156 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG------- 156 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC-------
Confidence 579999999853 223456778899999999999999998742 4578999999866544322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ++++++++||++.|+...
T Consensus 157 ---------------~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~ 198 (263)
T PRK07814 157 ---------------FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALE 198 (263)
T ss_pred ---------------CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhh
Confidence 2459999999999999988873 699999999999988643
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=186.66 Aligned_cols=173 Identities=18% Similarity=0.134 Sum_probs=140.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+++||++++++|++.|++|++++|++++.. +..+.+.....++.++++|++|.+++.++++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVD-KGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 57799999999999999999999999999999998875432 2333343334578899999999999988875
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|++|||||... +.+.+.+++.+++|+.++..+++.+.+.+ +.++||++||..+.++...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 155 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET----------- 155 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC-----------
Confidence 3799999999643 24556788999999999999999988753 4579999999866554322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++++. ||++++|+||.+.||...
T Consensus 156 -----------~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (265)
T PRK07097 156 -----------VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTA 198 (265)
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchh
Confidence 1349999999999999998874 899999999999999754
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-26 Score=184.92 Aligned_cols=170 Identities=17% Similarity=0.143 Sum_probs=134.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||++++++|+++|++|++++|+.+... .+.. ....++.++++|++|.+++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ--ELEA--AHGDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHh--hcCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999999864321 1111 113468889999999998887765
Q ss_pred CCCEEEEcccccc------cCCC----CchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccc
Q 026852 79 GCDGVFHTASPVI------FLSD----NPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+. +.|++.+++|+.++.++++++.+.+ ..+++|++||..+..+...
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------- 151 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG------- 151 (262)
T ss_pred CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC-------
Confidence 5699999998532 1121 2577899999999999999998864 2368999998876654322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. +|+|++|+||++.||+..
T Consensus 152 ---------------~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~ 193 (262)
T TIGR03325 152 ---------------GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRG 193 (262)
T ss_pred ---------------CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCcc
Confidence 1349999999999999998874 499999999999999754
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-26 Score=182.44 Aligned_cols=166 Identities=21% Similarity=0.258 Sum_probs=133.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC----CCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG----CDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~vi 84 (232)
++++||||+||||++++++|+++|++|++++|++++ ++++.....+++++++|++|.+++.+++++ .|.+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV-----LDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH-----HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 689999999999999999999999999999998643 222222234688999999999999999875 48999
Q ss_pred Ecccccc--c---CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 85 HTASPVI--F---LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 85 ~~Ag~~~--~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
||||... + .+.+.+++++++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~------------------- 137 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR------------------- 137 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC-------------------
Confidence 9998432 1 3345677899999999999999999864 3468999999866654322
Q ss_pred cccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||+++||+.+
T Consensus 138 ---~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~ 180 (240)
T PRK06101 138 ---AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD 180 (240)
T ss_pred ---CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence 134999999999999888754 5999999999999999754
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-26 Score=184.49 Aligned_cols=174 Identities=19% Similarity=0.198 Sum_probs=133.4
Q ss_pred CCCCCCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCc-chhhhhhhcCCCCceEEEEcCCCCcchHHHhh
Q 026852 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
|| +.+++|+++|||| ++|||++++++|+++|++|++++|+.... ..+..+++ ..++.++++|++|++++++++
T Consensus 1 ~~-~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~ 76 (256)
T PRK07889 1 MM-GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLA 76 (256)
T ss_pred Cc-ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHH
Confidence 44 4578899999999 89999999999999999999999875221 11112222 235778999999999988876
Q ss_pred c-------CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCC
Q 026852 78 D-------GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 78 ~-------~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~ 140 (232)
+ ++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+. .++||++|+... .+.
T Consensus 77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~~--- 152 (256)
T PRK07889 77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VAW--- 152 (256)
T ss_pred HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-ccC---
Confidence 4 5799999998542 123456677899999999999999998763 368999986532 111
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+. ..+|+.||++...+++.++.+ +||++++|+||++.||+..
T Consensus 153 --------------~~-----~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~ 197 (256)
T PRK07889 153 --------------PA-----YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAK 197 (256)
T ss_pred --------------Cc-----cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhh
Confidence 11 144899999999999888887 5899999999999998753
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=185.75 Aligned_cols=168 Identities=19% Similarity=0.203 Sum_probs=134.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-------CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-------CD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d 81 (232)
|+++||||+||||++++++|+++|++|++++|++++.. +..+++... .++.++++|++|.+++.+++++ +|
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ-AFAARLPKA-ARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhcccC-CeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999999999999875432 222233222 2789999999999999887653 69
Q ss_pred EEEEccccccc------CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASPVIF------LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|||||.... .+.+.++..+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~------------- 147 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG------------- 147 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC-------------
Confidence 99999986421 2335678899999999999999877653 4579999999877655332
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ +|+++++++||.+.||..
T Consensus 148 ---------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 189 (257)
T PRK07024 148 ---------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT 189 (257)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh
Confidence 134999999999999888755 599999999999999964
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-25 Score=186.41 Aligned_cols=211 Identities=19% Similarity=0.190 Sum_probs=149.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
|+||||||+|+||++++++|+++|++|++++|...... .....+. ....++.++.+|++|.+++.++++ ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchH-hHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 37999999999999999999999999999887543221 1111111 112356788999999999999886 5899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+||.... ...+.+.+.+++|+.++.++++++.+. +.+++|++||.. .|+... ..+++|+.... .....
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~-~yg~~~----~~~~~E~~~~~-----~p~~~ 148 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSAT-VYGDQP----KIPYVESFPTG-----TPQSP 148 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHH-hhCCCC----CCccccccCCC-----CCCCh
Confidence 9985432 223445678999999999999999887 778999999984 454322 22344443321 11255
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCCCCC--------CcchHHHHHHHHcCC-----CC------CCcc
Q 026852 165 YSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGN-----IY------SAAI 224 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~~~~--------~~~~~~~~~~~~~~~-----~~------~~~~ 224 (232)
|+.+|.++|++++.++++ .+++++++||+.++||..... .......+.+...+. ++ .++.
T Consensus 149 Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (338)
T PRK10675 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228 (338)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCc
Confidence 999999999999998776 489999999999999752211 112233444454432 22 3688
Q ss_pred ceeeeec
Q 026852 225 QDRIMIY 231 (232)
Q Consensus 225 ~~~~~~~ 231 (232)
+.|+|+|
T Consensus 229 ~~~~~v~ 235 (338)
T PRK10675 229 GVRDYIH 235 (338)
T ss_pred EEEeeEE
Confidence 9999998
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=185.35 Aligned_cols=172 Identities=17% Similarity=0.118 Sum_probs=132.8
Q ss_pred CCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|+++|||| ++|||+++++.|+++|++|++++|..... +.++++........++++|++|+++++++++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK--DRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH--HHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHH
Confidence 367899999996 68999999999999999999887642211 2222222111223578999999999998875
Q ss_pred ---CCCEEEEcccccc----------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCc
Q 026852 79 ---GCDGVFHTASPVI----------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||... +.+.++|+..+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~----- 155 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN----- 155 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC-----
Confidence 4799999998532 12345788899999999999999999976 3478999999866543221
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++...+.+.++.+ +||+|++|+||++.|++.
T Consensus 156 -----------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~ 197 (260)
T PRK06997 156 -----------------YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAA 197 (260)
T ss_pred -----------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchh
Confidence 134999999999999998887 589999999999999864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-26 Score=183.86 Aligned_cols=172 Identities=20% Similarity=0.200 Sum_probs=138.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+|+||++++++|+++|++|++++|+.+... +..+++. ...++.++++|++|+++++++++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAE-RVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG 80 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHH-HHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999875432 2233332 24568899999999999988775
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+|||+||... ..+.+.+++.+++|+.++.++++.+.+.+ +.++|+++||..+.++...
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------- 149 (252)
T PRK06138 81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG----------- 149 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC-----------
Confidence 6799999999532 23445667889999999999998887642 4579999999877654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+. |+++++++||+++||...
T Consensus 150 -----------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 192 (252)
T PRK06138 150 -----------RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFR 192 (252)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchh
Confidence 2449999999999999998774 899999999999999754
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=187.58 Aligned_cols=189 Identities=24% Similarity=0.247 Sum_probs=141.2
Q ss_pred EEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhc--CCCCce----EEEEcCCCCcchHHHhhc--CCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELD--GATERL----HLFKANLLEEGSFDSAVD--GCD 81 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~--~~~~~~----~~~~~D~~~~~~~~~~~~--~~d 81 (232)
||||||+|.||++++++|++.+ .++++++|++.+.- ....++. ....++ .++.+|++|.+.+..+++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~-~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLY-ELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHH-HHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHH-HHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 7999999999999999999997 57999999986443 2222231 112234 345899999999999999 899
Q ss_pred EEEEccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||.|+.- .+..+..+.+.+++|+.||.|+++++.++ +++++|++||..+..|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~P------------------------ 134 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNP------------------------ 134 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS-------------------------
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCC------------------------
Confidence 999999853 23446788999999999999999999998 8999999999987743
Q ss_pred cchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeee
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMI 230 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 230 (232)
.+.||+||.++|.++..++... +.++++||.|+|.++.. ..++-|..++-.|+ ...+....|.|+
T Consensus 135 -tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G----SVip~F~~Qi~~g~PlTvT~p~mtRffm 204 (293)
T PF02719_consen 135 -TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG----SVIPLFKKQIKNGGPLTVTDPDMTRFFM 204 (293)
T ss_dssp --SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT----SCHHHHHHHHHTTSSEEECETT-EEEEE
T ss_pred -CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC----cHHHHHHHHHHcCCcceeCCCCcEEEEe
Confidence 2669999999999998887765 78999999999999872 44555666666666 678899999887
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=187.53 Aligned_cols=176 Identities=16% Similarity=0.129 Sum_probs=137.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|+++||||+||||++++++|+++|++|++++|+.+..+ +..+++.....++.++++|++|.+++.++++
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~-~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLD-AVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999875432 2223333234567899999999999988877
Q ss_pred --CCCEEEEcccccccC-------CCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVIFL-------SDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||..... ..+.++..+++|+.++.++++++.+.+ +.++||++||.+...+...
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p------- 187 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASP------- 187 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC-------
Confidence 689999999853221 124457789999999999999987643 4579999999754321100
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.||++.+.+++.++.+ +||++++++||.+.|++.+
T Consensus 188 --------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~ 231 (293)
T PRK05866 188 --------------LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA 231 (293)
T ss_pred --------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc
Confidence 0145999999999999888776 4899999999999999864
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.6e-26 Score=186.75 Aligned_cols=175 Identities=17% Similarity=0.187 Sum_probs=139.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.........+.+.....++.++++|+++.+++.++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999986432222223333334578899999999999888775
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... +.+.+.+.+.+++|+.++.++++++.+.+ ..++||++||..++.+...
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------- 191 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------- 191 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC-----------
Confidence 5799999998531 23345678899999999999999998864 3469999999866644322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.++ ||++++|+||.++|+...
T Consensus 192 -----------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~ 234 (290)
T PRK06701 192 -----------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIP 234 (290)
T ss_pred -----------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccc
Confidence 1339999999999999988874 899999999999998754
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=188.76 Aligned_cols=194 Identities=19% Similarity=0.198 Sum_probs=137.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||++++++|+++|++|++++|+.++.. +..+++.....++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAE-AAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999875432 2333332224568899999999999988875
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C--ccEEEEecccceeccCCCCC---CCc
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S--IKRVVLTSSIGAMLLNETPM---TPD 144 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~vSS~~~~~~~~~~~---~~~ 144 (232)
++|+||||||... ..+.+.++.++++|+.|+.++++++.+.+ + .+|||++||....+...... +..
T Consensus 83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~ 162 (322)
T PRK07453 83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP 162 (322)
T ss_pred CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence 3899999999532 23456788999999999999999998863 1 25999999986543211100 000
Q ss_pred cccc-----cCCCCCh-----hhccccchhHHHHHHHHHHHHHHHHHhc----CCcEEEEccCcee-CCCC
Q 026852 145 VVID-----ETWFSNP-----VLCKENKEWYSLAKTLAEEAAWKFAKEN----GIDLVAIHPGTVI-GPFF 200 (232)
Q Consensus 145 ~~~~-----e~~~~~~-----~~~~~~~~~y~~sK~~~~~~~~~~~~~~----~i~~~~v~pg~v~-g~~~ 200 (232)
..++ +..+..+ ..+......|+.||.+.+.+++.+++++ ||++++++||+|+ |+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~ 233 (322)
T PRK07453 163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLF 233 (322)
T ss_pred cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccc
Confidence 0000 0000000 0001123569999999988888887764 7999999999996 6654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-26 Score=183.63 Aligned_cols=174 Identities=21% Similarity=0.192 Sum_probs=138.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|+++||||+||||++++++|+++|++|++++|+.++.. ...+++.....+++++++|+++.+++.++++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQ-AVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999865332 2333333334568899999999999887765
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++||+||... ..+.+.++..+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------- 154 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF--------- 154 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC---------
Confidence 4799999998421 23445677899999999999999987753 3479999999866543221
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +|+++++++||.+.|++..
T Consensus 155 -------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~ 197 (252)
T PRK07035 155 -------------QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFAS 197 (252)
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccc
Confidence 134999999999999998877 4899999999999998754
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=182.63 Aligned_cols=174 Identities=17% Similarity=0.200 Sum_probs=135.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
|++|+++||||+||||++++++|+++|++|++..+.......+.++++.....++..+++|++|.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999988865432221123334444334568888999999999888765
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... +.+.+++++.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------- 149 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG----------- 149 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC-----------
Confidence 5799999998532 24456778999999999999998887743 4479999999866543222
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++++ .|+++++++||++.||...
T Consensus 150 -----------~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~ 192 (246)
T PRK12938 150 -----------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK 192 (246)
T ss_pred -----------ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh
Confidence 244999999999988888776 5899999999999999754
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=183.13 Aligned_cols=166 Identities=20% Similarity=0.188 Sum_probs=134.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|++... ...++.++++|++|.+++.++++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999986431 12457899999999998876654
Q ss_pred --CCCEEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... ..+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------- 147 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE------- 147 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC-------
Confidence 5799999998421 23456788999999999999999887753 3468999999866533211
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
....|+.+|.+.+.+++.++.+ .||++++++||+++||+.
T Consensus 148 --------------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~ 190 (260)
T PRK06523 148 --------------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA 190 (260)
T ss_pred --------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence 0244999999999999988876 489999999999999974
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=188.56 Aligned_cols=175 Identities=21% Similarity=0.169 Sum_probs=137.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||++++++|+++|++|++.+|+......+..+++.....++.++++|++|.+++.++++
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999998865322223334444345678899999999999888775
Q ss_pred ---CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC----------ccEEEEecccceeccCCCC
Q 026852 79 ---GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS----------IKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----------~~~iv~vSS~~~~~~~~~~ 140 (232)
++|++|||||... +.+.++++..+++|+.+++++++++.+++. .++||++||..+..+...
T Consensus 86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~- 164 (306)
T PRK07792 86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG- 164 (306)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC-
Confidence 5799999999643 244567889999999999999998876431 258999999866644322
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.+|.+.+.+++.++.+ +||++++|+||. .|++
T Consensus 165 ---------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~ 204 (306)
T PRK07792 165 ---------------------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAM 204 (306)
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCch
Confidence 134999999999999888886 599999999994 6654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=181.20 Aligned_cols=175 Identities=18% Similarity=0.122 Sum_probs=137.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------ 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 79 (232)
+++|+++||||+|+||++++++|+++|++|+++.++......+..+.+.....++.++++|+++.+++.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999987665432222122333433345789999999999999888764
Q ss_pred -CCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 80 -CDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 80 -~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
+|+|||+||.... .+.+.+++.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 152 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG----------- 152 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC-----------
Confidence 6999999986432 2346788999999999999999998753 3469999999866543221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+. ++++++++||+++|+....
T Consensus 153 -----------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~ 196 (247)
T PRK12935 153 -----------QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE 196 (247)
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh
Confidence 1349999999999988888764 9999999999999987543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=182.30 Aligned_cols=172 Identities=20% Similarity=0.189 Sum_probs=134.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEE-EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
|.+++++||||+|+||++++++|+++|++|++ ..|+..+.. +..+++.....++.++++|++|++++.++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE-ETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999999876 466654321 2333343334678899999999999888876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.+|+||||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------- 150 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN---------- 150 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC----------
Confidence 4799999998532 23345566788999999999999998863 3469999999866543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.+ .|+++++++||++.++..
T Consensus 151 ------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~ 192 (250)
T PRK08063 151 ------------YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDAL 192 (250)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchh
Confidence 134999999999999988876 589999999999998864
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=184.17 Aligned_cols=177 Identities=18% Similarity=0.170 Sum_probs=138.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+|+||+++++.|+++|++|++++|+.++.+ ...+.+.....+++++++|++|+++++++++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELE-EAAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999999865332 2222333334568899999999999977664
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhh----CCccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.+|+|||+||.. ...+.+.+++.+++|+.++.++++++.+. .+.+++|++||..+.++.....
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~-------- 160 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEV-------- 160 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccc--------
Confidence 479999999853 22344567889999999999999988765 2457999999986665432200
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.....|+.+|++.+.+++.++++ +|+++++++||++.|+...
T Consensus 161 ----------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~ 205 (259)
T PRK08213 161 ----------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR 205 (259)
T ss_pred ----------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh
Confidence 01144999999999999998886 4899999999999998754
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=184.71 Aligned_cols=170 Identities=19% Similarity=0.121 Sum_probs=133.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++++++||||+||||++++++|+++|++|++++|++++.. ...+.+ .+++++++|++|++++.++++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK-ETAAEL----GLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh----ccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 366789999999999999999999999999999999875432 111222 257889999999999877664
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.+++++++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 146 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG---------- 146 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC----------
Confidence 4699999998532 23445678899999999999999988753 4579999999977644322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+.+.++.+ .|+++++|+||++.|++..
T Consensus 147 ------------~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~ 189 (273)
T PRK07825 147 ------------MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA 189 (273)
T ss_pred ------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc
Confidence 134899999888887777665 4999999999999998653
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.6e-26 Score=183.09 Aligned_cols=171 Identities=19% Similarity=0.273 Sum_probs=135.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+++||||+||||+++++.|+++|++|++++|+......+..+.+.....++.++++|+++++++.++++ .+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 7899999999999999999999999999999875432223333333334578999999999998887765 569
Q ss_pred EEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC----C-----ccEEEEecccceeccCCCCCCCcc
Q 026852 82 GVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH----S-----IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 82 ~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~-----~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
+||||||... ..+.+.+++.+++|+.++.++++++.+.+ . .++||++||..+..+...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------ 156 (256)
T PRK12745 83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN------ 156 (256)
T ss_pred EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC------
Confidence 9999998532 13446778899999999999999987752 1 457999999876654322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +|+++++++||.+.|+...
T Consensus 157 ----------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~ 199 (256)
T PRK12745 157 ----------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA 199 (256)
T ss_pred ----------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence 244999999999999998875 6999999999999998754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-26 Score=182.71 Aligned_cols=171 Identities=20% Similarity=0.198 Sum_probs=137.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+++... ...+++.....+++++++|++|.+++.++++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAE-RVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 57799999999999999999999999999999999865332 2223333334467889999999998877765
Q ss_pred CCCEEEEcccccc--------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 GCDGVFHTASPVI--------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ~~d~vi~~Ag~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
.+|+||||||... ..+.+.+++.+++|+.++.++++++.+.+ +.+++|++||..++.+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 152 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---------- 152 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc----------
Confidence 5799999999532 12345677889999999999999998863 35799999998654321
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
+.|+.||.+.+.+++.+++++ |+++++++||.+.|+....
T Consensus 153 ---------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 195 (250)
T PRK07774 153 ---------------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT 195 (250)
T ss_pred ---------------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc
Confidence 349999999999999998874 8999999999999998653
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-26 Score=184.35 Aligned_cols=170 Identities=16% Similarity=0.133 Sum_probs=135.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|++|||||+||||++++++|+++|++|++++|++++.. ...+.+ ..++.++++|++|.+++.++++
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA-SLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999999875332 111222 3467889999999999888765
Q ss_pred -CCCEEEEcccccc------cCCCCc----hhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -GCDGVFHTASPVI------FLSDNP----QADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+. +++++++|+.++..+++++.+.+ ..++||++||..+..+...
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------ 152 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG------ 152 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC------
Confidence 5799999999532 122222 67889999999999999998864 2368999999876654322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+. +|+|++|+||++.||+.
T Consensus 153 ----------------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~ 193 (263)
T PRK06200 153 ----------------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLR 193 (263)
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCc
Confidence 1349999999999999988874 69999999999999975
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-25 Score=183.67 Aligned_cols=206 Identities=31% Similarity=0.424 Sum_probs=150.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+++||||+|+||+++++.|+++|++|++++|+++.... +. ...++++++|++|.+++.++++++|+|||+|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~--~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-----LE--GLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-----cc--cCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 479999999999999999999999999999998754211 11 22578999999999999999999999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
... .....++..+++|+.++.++++++.+. +.+++|++||...+..... ..+.+|+....+. ...+.|+.+
T Consensus 74 ~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~----~~~~~e~~~~~~~---~~~~~Y~~s 144 (328)
T TIGR03466 74 DYR-LWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD----GTPADETTPSSLD---DMIGHYKRS 144 (328)
T ss_pred ecc-cCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC----CCCcCccCCCCcc---cccChHHHH
Confidence 543 234456788999999999999999887 6789999999855432111 1233443322221 123459999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCCCCccceeeeec
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (232)
|.+.|++++.++.+++++++++||+.++||...... .....+...+.++........++|+|
T Consensus 145 K~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 206 (328)
T TIGR03466 145 KFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPT-PTGRIIVDFLNGKMPAYVDTGLNLVH 206 (328)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCC-cHHHHHHHHHcCCCceeeCCCcceEE
Confidence 999999999998888999999999999999854322 22334444444442111223356665
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=186.20 Aligned_cols=182 Identities=19% Similarity=0.160 Sum_probs=136.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|+++||||+||||++++++|+++|++|++++|++++.. +..+++ .++.++++|++|.++++++++
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~-~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR-EALAGI----DGVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999875432 222222 237889999999999988764
Q ss_pred -CCCEEEEcccccc---cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 -GCDGVFHTASPVI---FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 -~~d~vi~~Ag~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|+||||||... ..+.+.++..+++|+.++.++++.+.+.+ +.++||++||.++..+... .+....+.
T Consensus 98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~---~~~~~~~~- 173 (315)
T PRK06196 98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIR---WDDPHFTR- 173 (315)
T ss_pred CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCC---ccccCccC-
Confidence 5799999999642 23456778899999999999999888753 3479999999855432111 01000000
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+. .....|+.||.+.+.+++.++++ +||++++|+||++.||...
T Consensus 174 -~~-----~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~ 220 (315)
T PRK06196 174 -GY-----DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQR 220 (315)
T ss_pred -CC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccc
Confidence 00 11245999999999999888775 4899999999999999754
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=181.35 Aligned_cols=174 Identities=22% Similarity=0.244 Sum_probs=138.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|+++||||+|+||++++++|+++|++|+++.|+......+..+++.....++.++++|+++.+++.++++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35679999999999999999999999999999888765422223333343335678999999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|++||+||... ..+.+.+++++++|+.++.++++++.+.+ ..++||++||.....+.+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------ 149 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG------------ 149 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC------------
Confidence 5799999998532 23455678899999999999999998864 2369999999865543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.+ .++++++++||++.|++.
T Consensus 150 ----------~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~ 191 (245)
T PRK12937 150 ----------YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELF 191 (245)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchh
Confidence 144999999999999988876 489999999999999974
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=180.49 Aligned_cols=173 Identities=17% Similarity=0.141 Sum_probs=138.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++++++||||+|+||++++++|+++|++|++++|++.+.. +...++.....+++++++|+++++++.++++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLK-AVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56789999999999999999999999999999999875432 2233333334578899999999999888876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+|||+||... +.+.+++++.+++|+.++.++++++.+.+ +.+++|++||..+.++...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----------- 152 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV----------- 152 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC-----------
Confidence 6899999998532 23345667889999999999999987642 4578999999877655332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ +|+++++++||.+.+++..
T Consensus 153 -----------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~ 195 (239)
T PRK07666 153 -----------TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAV 195 (239)
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchh
Confidence 134999999999988888765 5999999999999998643
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=185.07 Aligned_cols=196 Identities=20% Similarity=0.254 Sum_probs=135.9
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hH-HHhh-----cCCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SF-DSAV-----DGCD 81 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~-~~~~-----~~~d 81 (232)
||||||+|+||++++++|++.|++|+++.|+...... . ..+.++|+.|.. ++ ..++ .++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~--~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH--H---------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence 7999999999999999999999987777776543211 0 112335555443 32 2333 2689
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
+|||+||..... ..+....++.|+.++.++++++.+. +. ++|++||.. .|+... ..+.+|+....|
T Consensus 71 ~Vih~A~~~~~~-~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~-vyg~~~----~~~~~E~~~~~p------ 136 (308)
T PRK11150 71 AIFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA-TYGGRT----DDFIEEREYEKP------ 136 (308)
T ss_pred EEEECceecCCc-CCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchH-HhCcCC----CCCCccCCCCCC------
Confidence 999999853322 2234567999999999999999886 54 799999994 455432 122334332222
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cch-HHHHHHHHcCC---CC-CCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFG-AEVILNLINGN---IY-SAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~-~~~~~~~~~~~---~~-~~~~~~~~~~~ 231 (232)
..+|+.||.++|++++.++.+++++++++||++++||...... ... ..+..+...++ ++ +++++.|+|+|
T Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~ 213 (308)
T PRK11150 137 LNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVY 213 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeee
Confidence 2569999999999999988888999999999999999864432 111 22334556565 33 56778999998
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=181.19 Aligned_cols=172 Identities=19% Similarity=0.172 Sum_probs=135.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|+++||||+|+||++++++|+++|++|+++.|+.........+++.....+++++++|++++++++++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999887654332223334444445678999999999999888765 47
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~------------ 149 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG------------ 149 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC------------
Confidence 99999998532 23456778999999999999999988763 1369999999865543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +||+++.|+||.++||...
T Consensus 150 ----------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~ 192 (256)
T PRK12743 150 ----------ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG 192 (256)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc
Confidence 134999999999999888876 4899999999999998753
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=182.56 Aligned_cols=164 Identities=19% Similarity=0.123 Sum_probs=134.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|+++. . ....+++++++|+++.+++.++++
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------T--VDGRPAEFHAADVRDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------h--hcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 688999999999999999999999999999999998743 0 113467899999999999888875
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---------- 144 (252)
T PRK07856 75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG---------- 144 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC----------
Confidence 459999999853 223456678999999999999999988753 2368999999876644322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.++ .|++++++||.+.|++.
T Consensus 145 ------------~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~ 185 (252)
T PRK07856 145 ------------TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQS 185 (252)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHH
Confidence 2449999999999999998874 49999999999999864
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=181.45 Aligned_cols=177 Identities=20% Similarity=0.210 Sum_probs=137.8
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhh--hhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
+...+.+|++|||||++|||++++++|++.|++|++++|+.+....... ........++..+.||+++.++++++++
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999876543221 2222224678999999999988777654
Q ss_pred -------CCCEEEEccccc------ccCCCCchhhhhHHHHHH-HHHHHHHHHhhC---CccEEEEecccceeccCCCCC
Q 026852 79 -------GCDGVFHTASPV------IFLSDNPQADIVDPAVMG-TLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 79 -------~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++|++|||||.. .+.+.+.|++.+++|+.| .+.+.+.+.++. +.+.|+++||.++..+...
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~-- 159 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG-- 159 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC--
Confidence 579999999843 346688999999999996 566666665552 4568999999876644222
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
. ...|+.+|.+.+.+.+.++.+ +|||+|+|.||.|.|+.
T Consensus 160 ------------~-------~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 160 ------------S-------GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred ------------C-------cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 0 023888888888888888877 59999999999999997
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=180.64 Aligned_cols=169 Identities=17% Similarity=0.113 Sum_probs=137.9
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG- 79 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~- 79 (232)
||...+++|++|||||+|+||++++++|+++|++|++++|+.. .....++.++++|+++.+++.+++++
T Consensus 1 ~~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~----------~~~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (252)
T PRK08220 1 MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL----------TQEDYPFATFVLDVSDAAAVAQVCQRL 70 (252)
T ss_pred CCccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh----------hhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4566688899999999999999999999999999999999861 11134688999999999999988763
Q ss_pred ------CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 80 ------CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 80 ------~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
+|+||||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------ 144 (252)
T PRK08220 71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG------ 144 (252)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC------
Confidence 799999998532 23456778899999999999999987753 3468999999865533211
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.++||...
T Consensus 145 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~ 187 (252)
T PRK08220 145 ----------------MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQR 187 (252)
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhh
Confidence 144999999999999988887 6999999999999999753
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=180.15 Aligned_cols=174 Identities=11% Similarity=0.149 Sum_probs=130.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
-++|+++||||+||||++++++|+++| ++|++++|+++....+..+++... ..+++++++|++|.+++.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 356899999999999999999999995 999999999875222333333332 2378999999999998766654
Q ss_pred -CCCEEEEcccccccC--C---CCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVIFL--S---DNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||+|..... . .+...+++++|+.++.++++.+.+.+ +.++||++||..+..+...
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~---------- 155 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS---------- 155 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC----------
Confidence 689999999864321 1 11223579999999999887776653 4579999999866432211
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++...+.+.++.+ +|+++++++||+++|++..
T Consensus 156 ------------~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~ 198 (253)
T PRK07904 156 ------------NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA 198 (253)
T ss_pred ------------CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc
Confidence 133999999998887777655 5999999999999998654
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=181.46 Aligned_cols=171 Identities=16% Similarity=0.115 Sum_probs=131.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG----- 79 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 79 (232)
++++|+++||||+||||+++++.|++.|++|++++++..........+. ..++.++++|++|++++.+++++
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999887665432111111222 24688999999999999888763
Q ss_pred ---CCEEEEccccc-----------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCC
Q 026852 80 ---CDGVFHTASPV-----------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 80 ---~d~vi~~Ag~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~ 142 (232)
+|++|||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||.....+...
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--- 155 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP--- 155 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC---
Confidence 89999999742 112345667889999999999999998753 3479999998743321110
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++++ +|+++++|+||++.|+..
T Consensus 156 -------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~ 197 (253)
T PRK08642 156 -------------------YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDA 197 (253)
T ss_pred -------------------ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchh
Confidence 134999999999999999887 489999999999999854
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=180.88 Aligned_cols=175 Identities=19% Similarity=0.246 Sum_probs=133.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch---hhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
..+++|++|||||+||||++++++|+++|++|+++.++...... +..+++.....+++++++|+++++++.++++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence 34678999999999999999999999999997777665432111 2222333224568899999999999988765
Q ss_pred -----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEe-cccceeccCCCCCCCccc
Q 026852 79 -----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLT-SSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 -----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~v-SS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||.. ...+.+.+++.+++|+.++..+++++.+.+. .++++++ ||..+... +.
T Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-~~------- 155 (257)
T PRK12744 84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-PF------- 155 (257)
T ss_pred HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-CC-------
Confidence 579999999952 2244556788999999999999999988652 3577776 44433211 10
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ||++++++||++.|++..
T Consensus 156 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~ 198 (257)
T PRK12744 156 ---------------YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY 198 (257)
T ss_pred ---------------cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence 1349999999999999998874 799999999999998754
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=182.23 Aligned_cols=174 Identities=17% Similarity=0.221 Sum_probs=139.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|+++||||+|+||+++++.|+++|++|++++|+.+... +..+++... ..++.++++|+++.+++..+++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALA-QARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999875432 222333222 4578899999999998877665
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|+|||+||.. ...+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------- 156 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS--------- 156 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC---------
Confidence 569999999852 234567788999999999999999988753 3479999999866644322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||++.||+...
T Consensus 157 -------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~ 200 (257)
T PRK09242 157 -------------GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG 200 (257)
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc
Confidence 134999999999999888776 48999999999999998643
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=183.57 Aligned_cols=168 Identities=23% Similarity=0.245 Sum_probs=134.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|++|||||+||||++++++|+++|++|++++|+++... +..+.. ..++.++++|++|.+++.++++ ++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLA-DLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999999999875322 111111 3467889999999999887765 56
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+||||||... +.+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+..+.+.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------------- 145 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM------------- 145 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC-------------
Confidence 99999998542 23456788999999999999999986542 4579999999866644322
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ +|+++++++||.+.|++..
T Consensus 146 ---------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~ 188 (275)
T PRK08263 146 ---------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG 188 (275)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence 245999999999999888876 6999999999999998763
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=178.58 Aligned_cols=169 Identities=12% Similarity=0.053 Sum_probs=131.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|+++||||++|||++++++|+++|++|++++|++++.. +..+++.....++..+++|++++++++++++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~-~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALK-DTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999876543 2233333334567889999999999987753
Q ss_pred --CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||.. .+.+.+.+.+.+++|+.++..+++.+.+++ ..++||++||..+. + .
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-~--~------- 150 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-Q--D------- 150 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-C--C-------
Confidence 579999999732 123345667788999999999988887753 24799999987432 1 1
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.||++.+.+.+.++.+ +||++++|+||++.|+.
T Consensus 151 ---------------~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 151 ---------------LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred ---------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 133888999988888888876 58999999999999984
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=180.73 Aligned_cols=173 Identities=21% Similarity=0.198 Sum_probs=134.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++++++||||+||||++++++|+++|++|++. .|+.++.. .....+.....+++++++|++|.+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD-ETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 567899999999999999999999999999775 56553221 2223333224568899999999999988766
Q ss_pred -------CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -------GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -------~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+|||+||.... .+.+.++..+++|+.++.++++.+.+.+ ..+++|++||..+..+...
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~------ 156 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG------ 156 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC------
Confidence 47999999986322 3344567888999999999999998863 3469999999866543221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+ +++++++++||+++||...
T Consensus 157 ----------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~ 199 (254)
T PRK12746 157 ----------------SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINA 199 (254)
T ss_pred ----------------CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchh
Confidence 134999999999998888775 5899999999999998754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=180.92 Aligned_cols=173 Identities=16% Similarity=0.170 Sum_probs=137.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
++++++|||||+|+||++++++|++.|++|++++|+.+... +....+.....++.++++|++|.++++++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAE-KVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999875332 2222233334568999999999999988875
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++||+||... ..+.+.+++.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----------- 148 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----------- 148 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC-----------
Confidence 5799999998431 23345567889999999999999987643 4578999999877654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+. ++++++++||.++||+..
T Consensus 149 -----------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~ 191 (250)
T TIGR03206 149 -----------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLD 191 (250)
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHH
Confidence 1349999999999988888774 899999999999999643
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=182.14 Aligned_cols=173 Identities=18% Similarity=0.181 Sum_probs=137.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+|+||++++++|+++|++|++++|++++.. ....++.....+++++++|++|.+++.++++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA-AAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999876433 2223333335678899999999999988876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|+|||+||... ..+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+.++...
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----------- 149 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG----------- 149 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC-----------
Confidence 5799999998532 23345667788999999999998887753 4679999999876654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ .++++++++||.++||...
T Consensus 150 -----------~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~ 192 (258)
T PRK12429 150 -----------KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR 192 (258)
T ss_pred -----------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence 134888888888888777665 4899999999999998754
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=180.74 Aligned_cols=173 Identities=19% Similarity=0.178 Sum_probs=138.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
++++++|||||+|+||++++++|+++|++|++++|++++.. .....+.. ..++.++++|++|.+++.++++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE-RVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG 80 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 67789999999999999999999999999999999985432 22222222 3568899999999999988875
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+|||+||... ..+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+..+...
T Consensus 81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 150 (251)
T PRK07231 81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG---------- 150 (251)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC----------
Confidence 4699999998532 23456678899999999999999988753 4578999999876644322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||++.|++...
T Consensus 151 ------------~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~ 194 (251)
T PRK07231 151 ------------LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA 194 (251)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence 244999999999988888776 38999999999999987543
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=182.47 Aligned_cols=166 Identities=28% Similarity=0.340 Sum_probs=131.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+||||++++++|+++|++|++++|+++... .+.. ....++.++++|++|.+++.++++ ++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~--~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALD--DLKA--RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHH--hccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999999864321 1111 113468899999999999888764 479
Q ss_pred EEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 82 GVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 82 ~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
+||||||.... .+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------- 144 (276)
T PRK06482 79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG-------------- 144 (276)
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC--------------
Confidence 99999985422 2345567899999999999999986642 4579999999865433211
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ +|++++++|||.+.|+..
T Consensus 145 --------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~ 186 (276)
T PRK06482 145 --------FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFG 186 (276)
T ss_pred --------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCc
Confidence 245999999999999998876 699999999999977653
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=181.84 Aligned_cols=174 Identities=18% Similarity=0.150 Sum_probs=134.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch------hhhhhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
+++|+++||||+||||+++++.|+++|++|++++|+.+.... +..+++.....++.++++|+++.+++.++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 677999999999999999999999999999999998653211 1122233334578899999999999988776
Q ss_pred ------CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 ------GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|+||||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||.....+..
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------ 157 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKW------ 157 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccc------
Confidence 5799999998532 23445678899999999999999998763 346899999875432210
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccC-ceeCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPG-TVIGPF 199 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg-~v~g~~ 199 (232)
. + ....|+.||.+.+.+++.++.++ +|++++|+|| ++.|+.
T Consensus 158 -------~--~-----~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~ 202 (273)
T PRK08278 158 -------F--A-----PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA 202 (273)
T ss_pred -------c--C-----CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH
Confidence 0 0 02459999999999999998874 8999999999 577764
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=183.24 Aligned_cols=177 Identities=22% Similarity=0.209 Sum_probs=138.8
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
|+..|++|++|||||+|+||+++++.|+++|++|++++|++++.. ...+++... ..++.++++|++|.+++.++++
T Consensus 1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (276)
T PRK05875 1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLA-AAAEEIEALKGAGAVRYEPADVTDEDQVARAVDA 79 (276)
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHH
Confidence 344578899999999999999999999999999999999865332 222222211 3568899999999999988876
Q ss_pred ------CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCC
Q 026852 79 ------GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++||+||... ..+.+.+.+++++|+.++.++++++.+.+ +.++||++||.....+.+.
T Consensus 80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---- 155 (276)
T PRK05875 80 ATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW---- 155 (276)
T ss_pred HHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC----
Confidence 6799999998431 23345578899999999999999887753 3469999999865432211
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
.+.|+.+|.+.+.+++.++.+. ++++++++||.++|++..
T Consensus 156 ------------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~ 198 (276)
T PRK05875 156 ------------------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVA 198 (276)
T ss_pred ------------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccc
Confidence 2459999999999999988774 799999999999998754
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=180.32 Aligned_cols=175 Identities=15% Similarity=0.113 Sum_probs=138.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
|.+.+++|+++||||+|+||+++++.|+++|++|++++|++++.. +..+++... ..++.++++|+++.+++.++++
T Consensus 1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (259)
T PRK06125 1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE-ALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA 79 (259)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh
Confidence 344578899999999999999999999999999999999875432 222333221 3568899999999999988775
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++++.++++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 80 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---------- 149 (259)
T PRK06125 80 GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD---------- 149 (259)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC----------
Confidence 579999999853 224556788999999999999999987764 2368999999866533211
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.+|.+.+.+++.++.+ +|+++++|+||.+.||.
T Consensus 150 ------------~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 190 (259)
T PRK06125 150 ------------YICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR 190 (259)
T ss_pred ------------chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence 134889999999998888775 58999999999999985
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=179.43 Aligned_cols=169 Identities=22% Similarity=0.243 Sum_probs=134.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+|+||++++++|+++|++|++++|+.+... +..+++ ..+++++++|++|.+++..+++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLE-AARAEL---GESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999864321 122222 3467899999999988766654
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|+||||||... ..+.+.+++.+++|+.++.++++++.+.+ ..+++|++||..+.++.+.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~------------- 146 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN------------- 146 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC-------------
Confidence 5799999998532 23456778999999999999999998853 3468898888766654322
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.++||+.
T Consensus 147 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~ 188 (249)
T PRK06500 147 ---------SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLY 188 (249)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHH
Confidence 245999999999999888876 489999999999999964
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-25 Score=179.09 Aligned_cols=168 Identities=21% Similarity=0.173 Sum_probs=131.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|+++||||+||||+++++.|+++|++|++++|+.+... +..+++.....+++++++|++|++++.++++ .+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLE-EAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 478999999999999999999999999999999875432 2222333224578899999999999988765 56
Q ss_pred CEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 81 DGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 81 d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
|+||||||.. .+.+.+.|++.+++|+.+++++++++.+.+ ..++||++||..+..+...
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------ 147 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG------------ 147 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC------------
Confidence 9999999842 234456678999999999999999997752 2478999999865432211
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCceeCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGP 198 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v~g~ 198 (232)
...|+.+|++.+.+.+.++.+ +|+++++|+||.++++
T Consensus 148 ----------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 148 ----------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred ----------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 134889999988888887776 3899999999999964
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=179.74 Aligned_cols=173 Identities=21% Similarity=0.214 Sum_probs=133.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
++++|||||+|+||++++++|+++|++|++..++......+....+.....++.++++|++|.+++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 36899999999999999999999999998877543221112223333334568899999999999988876 57
Q ss_pred CEEEEccccccc------CCCCchhhhhHHHHHHHHHHHHHHHhhCC------ccEEEEecccceeccCCCCCCCccccc
Q 026852 81 DGVFHTASPVIF------LSDNPQADIVDPAVMGTLNVLRSCAKVHS------IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 81 d~vi~~Ag~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
|+||||||.... .+.+++++.+++|+.++.++++++.+.+. .+++|++||..+.++.+..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------- 153 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE-------- 153 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC--------
Confidence 999999986421 23456678999999999999999887631 2579999998776553320
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+. |+++++++||+++||+..
T Consensus 154 -------------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 154 -------------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred -------------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence 1239999999999999988874 899999999999999753
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=181.02 Aligned_cols=175 Identities=22% Similarity=0.218 Sum_probs=138.4
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|+++||||+|+||+++++.|+++|++|++++|++++.. +....+.....+++++.+|+++.+++.++++
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLK-ELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4578899999999999999999999999999999999875432 2223333334568899999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC-----------CccEEEEecccceeccCCCC
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH-----------SIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~iv~vSS~~~~~~~~~~ 140 (232)
++|+|||+||... +.+.+.++.++++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~- 162 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ- 162 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC-
Confidence 5799999998532 23346778899999999999999887642 1368999999866533211
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +++++++++||+++||+..
T Consensus 163 ---------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~ 205 (258)
T PRK06949 163 ---------------------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINH 205 (258)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcch
Confidence 244999999999999888776 4899999999999999754
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-25 Score=182.97 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=136.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|+++||||+||||++++++|+++|++|++++|+.++.. +..+++.. ...++.++++|++|.+++.++++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGK-AAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 57899999999999999999999999999999999875432 22222221 13568899999999999988765
Q ss_pred --CCCEEEEccccccc---CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||.... .+.+.++..+++|+.++..+++.+.+.+ +.++||++||.++....... .++.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~------~~~~ 166 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIH------FDDL 166 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCC------cccc
Confidence 47999999985422 3456778899999999998888887753 34799999998654311110 1111
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEE--ccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAI--HPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v--~pg~v~g~~~~~ 202 (232)
....+ ......|+.||.+.+.+.+.++.+. +++++++ +||+|.|++.+.
T Consensus 167 ~~~~~---~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~ 220 (306)
T PRK06197 167 QWERR---YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN 220 (306)
T ss_pred CcccC---CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc
Confidence 10011 0112559999999999999888874 6776655 799999998654
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-26 Score=175.72 Aligned_cols=172 Identities=19% Similarity=0.242 Sum_probs=143.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
++||++++||+.||||+++.++|++.|..+.+++.+.+..+. ..++. ....++.|++||+++..+++++++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a--~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA--IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH--HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 679999999999999999999999999988888777765432 22222 235778999999999999999887
Q ss_pred --CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCc------cEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI------KRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|++||+||.+. +.+|+.++++|+.|..+-+..++++|+. +-||++||..+..|.+.
T Consensus 81 fg~iDIlINgAGi~~---dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~----------- 146 (261)
T KOG4169|consen 81 FGTIDILINGAGILD---DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV----------- 146 (261)
T ss_pred hCceEEEEccccccc---chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc-----------
Confidence 4599999999865 5679999999999999999999998633 46999999999988766
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
.|.|+++|+++.++++++++..- .++.||+++.+|||++.|..
T Consensus 147 ---~pVY~AsKaGVvgFTRSla~~ay---y~~sGV~~~avCPG~t~t~l 189 (261)
T KOG4169|consen 147 ---FPVYAASKAGVVGFTRSLADLAY---YQRSGVRFNAVCPGFTRTDL 189 (261)
T ss_pred ---chhhhhcccceeeeehhhhhhhh---HhhcCEEEEEECCCcchHHH
Confidence 67888888888888888887653 34679999999999998864
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=179.54 Aligned_cols=182 Identities=22% Similarity=0.201 Sum_probs=135.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcC---
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDG--- 79 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~--- 79 (232)
++++|+++||||+||||+++++.|+++|++|++++|++++.. +..+++.. ....+.++++|++|++++.+++++
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALN-ELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE 79 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHH-HHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999999875432 22333321 123567889999999999888763
Q ss_pred ----CCEEEEcccccc--------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 80 ----CDGVFHTASPVI--------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 80 ----~d~vi~~Ag~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
+|+|||||+... +.+.+.+...+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 80 ~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----- 154 (256)
T PRK09186 80 KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF----- 154 (256)
T ss_pred HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-----
Confidence 799999997431 23345678889999999999999988764 4579999999866543211
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...++... .....|+.||.+.+.+.+.++.+ +++++++++||.++++.
T Consensus 155 -~~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 155 -EIYEGTSM------TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred -hhcccccc------CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 00111110 01124999999999999888886 58999999999998764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=179.00 Aligned_cols=171 Identities=19% Similarity=0.186 Sum_probs=136.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|+++||||+|+||+++++.|+++|++|++++|++... ....+.. ..++.++++|+++.+++.++++
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~--~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA--EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999987521 1222221 2456789999999999888765
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 157 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER---------- 157 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC----------
Confidence 5699999998532 23345677899999999999999988753 4579999999877654332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++|+||.+.|++..
T Consensus 158 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~ 200 (255)
T PRK06841 158 ------------HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGK 200 (255)
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccc
Confidence 134999999999998888887 4899999999999999754
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=176.00 Aligned_cols=210 Identities=19% Similarity=0.277 Sum_probs=165.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
++++||||.||||++.+..+... .++.+.++--.--...+.+++... ..+..|++.|+.+...+...+. .+|.||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n-~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN-SPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc-CCCceEeeccccchHHHHhhhccCchhhhh
Confidence 78999999999999999999987 455554432111111233444433 5789999999999999888875 679999
Q ss_pred Eccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccc-cCCCCChhhccccc
Q 026852 85 HTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVID-ETWFSNPVLCKENK 162 (232)
Q Consensus 85 ~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~ 162 (232)
|+|+.. .+.+..++.+.+..|++++..++++++-..+.+++|++||. .+||... +.... |...++|.
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd-eVYGds~----~~~~~~E~s~~nPt------ 154 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD-EVYGDSD----EDAVVGEASLLNPT------ 154 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccc-ceecCcc----ccccccccccCCCC------
Confidence 999864 34455666788899999999999999887678999999999 6777655 22322 55555543
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
++|++||+++|+..+.|...+|++++++|-++||||++.+. ..+++|+.-...+. +.|+|.+.|.|+|
T Consensus 155 npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~ 225 (331)
T KOG0747|consen 155 NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLY 225 (331)
T ss_pred CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence 77999999999999999999999999999999999998776 56777777555555 9999999999998
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-25 Score=179.28 Aligned_cols=174 Identities=14% Similarity=0.129 Sum_probs=137.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||+++++.|+++|++|++++|+..... ....++.....++.++++|+++.+++.++++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG 87 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999998765332 2223333334568899999999999887765
Q ss_pred CCCEEEEcccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 GCDGVFHTASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 ~~d~vi~~Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|++||+||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 155 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN------------ 155 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC------------
Confidence 4699999998532 23346677889999999999999998753 3469999999866543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|++.+.+++.++.+ .||++++++||.+.|++...
T Consensus 156 ----------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~ 199 (255)
T PRK06113 156 ----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc
Confidence 134999999999999998876 48999999999999987543
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=179.18 Aligned_cols=163 Identities=20% Similarity=0.233 Sum_probs=133.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|++|||||+||||+++++.|+++|++|++++|++.... ..++.++++|++|++++.++++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999875431 2367889999999999888765
Q ss_pred -CCCEEEEcccccc--------------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCC
Q 026852 79 -GCDGVFHTASPVI--------------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 79 -~~d~vi~~Ag~~~--------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~ 140 (232)
.+|++|||||... ..+.+.+++++++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~- 154 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG- 154 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC-
Confidence 4699999998532 13446678899999999999999998764 3468999999876644322
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCcee-CCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI-GPF 199 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~-g~~ 199 (232)
...|+.+|.+.+.+++.++.+ +||++++|+||.+. +++
T Consensus 155 ---------------------~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~ 196 (266)
T PRK06171 155 ---------------------QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGL 196 (266)
T ss_pred ---------------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCC
Confidence 244999999999999988876 48999999999997 554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=180.24 Aligned_cols=168 Identities=17% Similarity=0.106 Sum_probs=131.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+++||||+||||++++++|+++|++|++++|+++... +..+++.. ..++.++++|++|.++++++++ ++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLE-KALKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999999999999999999999999999999875432 23333332 2367899999999999988774 579
Q ss_pred EEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccC
Q 026852 82 GVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 82 ~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|||||... +.+.+++.+.+++|+.++..+++.+.+.+ +.++||++||..+..+.+.
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~----------- 147 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP----------- 147 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC-----------
Confidence 9999998531 23345667778899999988887766532 3579999999866533221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+++.++.+ +||++++|+||++.||+.
T Consensus 148 -----------~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~ 189 (259)
T PRK08340 148 -----------LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGA 189 (259)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccH
Confidence 144999999999999988887 489999999999999975
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-25 Score=178.08 Aligned_cols=178 Identities=25% Similarity=0.215 Sum_probs=140.7
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
||+ .+++|+++||||+|+||++++++|+++|++|++++|++++.. ...+++.....++.++++|++|.+++.++++
T Consensus 1 ~~~-~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 1 MAS-NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEAR-ELAAALEAAGGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCC-CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 344 367899999999999999999999999999999998875432 2233333334578999999999999888774
Q ss_pred -----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+|||+||... ..+.+.+++.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 152 (250)
T PRK12939 79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK------ 152 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC------
Confidence 5799999998532 23455678889999999999999988753 3459999999866544322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.+ .+++++.++||.+.|+....
T Consensus 153 ----------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~ 196 (250)
T PRK12939 153 ----------------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY 196 (250)
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence 144999999999999888776 48999999999999997643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=180.54 Aligned_cols=168 Identities=20% Similarity=0.186 Sum_probs=135.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--------CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------GC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~~ 80 (232)
|++|||||+||||++++++|+++|++|++++|+++... +..+... ..+++++++|++|.+++.++++ ++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-ALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999999875432 1222222 3578999999999999888765 45
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+||||||... ..+.++++.++++|+.++.++++++.+.+ +.++||++||..+.++...
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 145 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG------------- 145 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC-------------
Confidence 99999998642 23445678899999999999999987653 4579999999877765432
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+ +++++++++||++.|++..
T Consensus 146 ---------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~ 188 (260)
T PRK08267 146 ---------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLD 188 (260)
T ss_pred ---------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccc
Confidence 244999999999999888765 4899999999999998754
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=178.09 Aligned_cols=175 Identities=19% Similarity=0.185 Sum_probs=138.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|+++||||+|+||.+++++|+++|++|++++|++++.. .....+.....++.++++|++|.+++.++++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA-ATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 356789999999999999999999999999999999975332 2333333334568899999999999988875
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEeccccee-ccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAM-LLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~-~~~~~~~~~~~~~~ 148 (232)
++|+|||+||... ..+.+++...+++|+.++.++++.+.+.+ +.++||++||..+. .+...
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~--------- 152 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPG--------- 152 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCC---------
Confidence 5799999998643 23455678899999999999999987642 45789999998654 22111
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.+ .|+++++++||+++||....
T Consensus 153 -------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~ 196 (251)
T PRK12826 153 -------------LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGN 196 (251)
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhh
Confidence 134999999999999888776 48999999999999997643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=179.91 Aligned_cols=174 Identities=18% Similarity=0.174 Sum_probs=139.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|+++||||+|+||++++++|+++|++|++++|+++... ...+++.....++.++++|+++.+++.++++
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLE-AAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 368899999999999999999999999999999999875332 2333343334568899999999999888775
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+++++.+++|+.+++++++.+.+.+ +.+++|++||..+..+.+.
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------- 156 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG---------- 156 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC----------
Confidence 459999999853 234456778899999999999998887743 4579999999876544322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ .++++++|+||+++|+...
T Consensus 157 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~ 199 (256)
T PRK06124 157 ------------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNA 199 (256)
T ss_pred ------------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchh
Confidence 144999999999998888776 4899999999999999743
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-25 Score=182.16 Aligned_cols=182 Identities=14% Similarity=0.061 Sum_probs=135.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||+|+||++++++|+++| +|++++|... .+.+|++|.+.+.++++ ++|+|||+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 61 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKIRPDVIVNA 61 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence 379999999999999999999999 7888877531 23589999999999988 58999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
|+.... ....+++..+.+|+.++.++++++.+. + .++|++||.. +|+... ..+.+|+..+.| .+.|
T Consensus 62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g-~~~v~~Ss~~-Vy~~~~----~~p~~E~~~~~P------~~~Y 128 (299)
T PRK09987 62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-G-AWVVHYSTDY-VFPGTG----DIPWQETDATAP------LNVY 128 (299)
T ss_pred CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEccce-EECCCC----CCCcCCCCCCCC------CCHH
Confidence 986533 334566777899999999999999887 5 4899999985 454322 223445443333 2569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCC--ccceeee
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSA--AIQDRIM 229 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~ 229 (232)
+.||.++|+++..+ ..+.+++||++++||... .....++.....++ ++++ +.+.+++
T Consensus 129 g~sK~~~E~~~~~~----~~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~ 190 (299)
T PRK09987 129 GETKLAGEKALQEH----CAKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAE 190 (299)
T ss_pred HHHHHHHHHHHHHh----CCCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHH
Confidence 99999999988654 346799999999999743 23344454455554 5555 5665544
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-25 Score=176.56 Aligned_cols=175 Identities=20% Similarity=0.235 Sum_probs=137.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+|+||++++++|+++|++|+++.|+..+..............+++++++|++|.+++.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999998888876533222222333334578999999999999988775
Q ss_pred CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhh---CCccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+|||+||.... .+.+.+.+.+++|+.++.++++.+.+. .+.+++|++||..+..+...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~----------- 152 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG----------- 152 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC-----------
Confidence 56999999985322 245567888999999999999998653 25689999999866643221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|++.+.+++.++++ .|++++++|||+++|+....
T Consensus 153 -----------~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~ 196 (249)
T PRK12825 153 -----------RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA 196 (249)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc
Confidence 144999999999999888776 59999999999999998654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=181.45 Aligned_cols=171 Identities=20% Similarity=0.235 Sum_probs=133.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhc------
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++|++|||||+|+||+++++.|+++|++|++++|+++.... ..+... ....+++++++|++|++++.+ ++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQEN-LLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 45899999999999999999999999999999998754332 222222 113578999999999998876 43
Q ss_pred -CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.... .+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+.++...
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~---------- 149 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG---------- 149 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC----------
Confidence 46999999985332 3345667889999999999999986643 4579999999866654332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.++||..+
T Consensus 150 ------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 192 (280)
T PRK06914 150 ------------LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE 192 (280)
T ss_pred ------------CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence 245999999999999888743 5999999999999999643
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=179.03 Aligned_cols=174 Identities=21% Similarity=0.228 Sum_probs=137.6
Q ss_pred CCCCcEEEEECCCC-hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGASG-FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g-~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
.+++|+++||||+| |||+++++.|+++|++|++++|++++.. +..+++.. ...++.++++|+++.+++.++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLG-ETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 46789999999986 8999999999999999999999875432 22232322 12468899999999999888775
Q ss_pred ----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ . .++||++||..+..+...
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------ 166 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG------ 166 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC------
Confidence 579999999853 223456788899999999999999988753 2 468999998765533221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +||++++|+||.++||+.+
T Consensus 167 ----------------~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~ 209 (262)
T PRK07831 167 ----------------QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLA 209 (262)
T ss_pred ----------------CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccc
Confidence 134999999999999999887 5899999999999999764
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-25 Score=176.97 Aligned_cols=177 Identities=23% Similarity=0.216 Sum_probs=134.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||++++++|+++|++|++++|+..........++.....++.++++|+++++++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 6778999999999999999999999999999999976432222223333334568899999999999888775
Q ss_pred CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 79 GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
++|++|||||.... ....+...+++|+.++.++++++.+.+. .+++|++||....+.... +. .+.
T Consensus 84 ~~d~vi~~ag~~~~-~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~---~~~- 149 (248)
T PRK07806 84 GLDALVLNASGGME-SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTV---------KT---MPE- 149 (248)
T ss_pred CCcEEEECCCCCCC-CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccc---------cC---Ccc-
Confidence 57999999985322 2334677899999999999999998753 369999999644321100 00 111
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ .++++++++||.+.||..
T Consensus 150 ----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~ 191 (248)
T PRK07806 150 ----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT 191 (248)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh
Confidence 245999999999999998876 589999999999988754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-25 Score=179.02 Aligned_cols=171 Identities=15% Similarity=0.154 Sum_probs=136.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+++||||+||||++++++|+++|++|++++|+.++.. +...++.....++.++++|++|.+++.++++ ++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGE-ETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999999875432 2333344345678899999999999888765 589
Q ss_pred EEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 82 GVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 82 ~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
+||||||... +.+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------------- 145 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA-------------- 145 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC--------------
Confidence 9999998532 23345677889999999999999887643 4579999999876644322
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|++.+.+.+.++.+ .|+++++++||++.|+....
T Consensus 146 --------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 189 (270)
T PRK05650 146 --------MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDS 189 (270)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccc
Confidence 244999999999999888887 48999999999999997653
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-25 Score=185.01 Aligned_cols=174 Identities=14% Similarity=0.183 Sum_probs=132.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCC--cchHHH---hhcC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLE--EGSFDS---AVDG 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~--~~~~~~---~~~~ 79 (232)
.++.++||||+||||++++++|+++|++|++++|++++.+ +..+++... ..++..+.+|+++ .+.+++ .+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLK-DVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999986543 222333221 2467888999985 233333 3333
Q ss_pred --CCEEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 80 --CDGVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 80 --~d~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
+|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+......
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~-------- 202 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD-------- 202 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC--------
Confidence 469999998532 23445678899999999999999998864 4579999999876531110
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
| ....|+.||++.+.+.+.++.+ +||++++++||+|.|++..
T Consensus 203 -------p-----~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~ 247 (320)
T PLN02780 203 -------P-----LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS 247 (320)
T ss_pred -------c-----cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence 0 0245999999999999999887 4899999999999999754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-25 Score=178.59 Aligned_cols=171 Identities=20% Similarity=0.209 Sum_probs=133.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-CCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~ 86 (232)
+|++|||||+|+||++++++|+++|++|++++|++.... +..+.......++.++++|++|.+++.+++. ++|+||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVT-ALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 368999999999999999999999999999999864322 1112222223468899999999999999887 79999999
Q ss_pred ccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 87 ASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 87 Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
||... +.+.+.++..+++|+.++.++++.+++.+ +.++||++||..+..+.+.
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~------------------- 141 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF------------------- 141 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC-------------------
Confidence 98532 23345677889999999999988876642 4579999999866543221
Q ss_pred cccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ .|+++++|+||++.+++..
T Consensus 142 ---~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 142 ---TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND 184 (257)
T ss_pred ---cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence 245999999999998887765 5999999999999887643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=178.58 Aligned_cols=172 Identities=23% Similarity=0.235 Sum_probs=131.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+||||+++++.|+++|++|+++.++..........++.....++.++++|+++.+++.++++ ++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 6899999999999999999999999998776443222222233333334578999999999999887764 579
Q ss_pred EEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC------ccEEEEecccceeccCCCCCCCcccccc
Q 026852 82 GVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS------IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 82 ~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++||+||... +.+.++++..+++|+.++.++++.+.+.+. .++||++||..+.++....
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--------- 153 (248)
T PRK06947 83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE--------- 153 (248)
T ss_pred EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC---------
Confidence 9999998542 234456678899999999999887776532 2479999998776543220
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. |+++++++||+++||+..
T Consensus 154 ------------~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~ 196 (248)
T PRK06947 154 ------------YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA 196 (248)
T ss_pred ------------CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence 1239999999999998888774 899999999999999743
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=180.09 Aligned_cols=169 Identities=20% Similarity=0.205 Sum_probs=133.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+++... +..+++.....+++++++|+++++++.++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVD-AAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999875432 2222333223467889999999999988775
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~------------ 153 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM------------ 153 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC------------
Confidence 469999999742 223455678889999999999999988753 2369999999866543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIG 197 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g 197 (232)
...|+.+|.+.+.+++.++.+ .|+++++++||.+.+
T Consensus 154 ----------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 154 ----------QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 245999999999999988876 489999999999973
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=179.12 Aligned_cols=164 Identities=19% Similarity=0.237 Sum_probs=132.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+||||+++++.|+++|++|++++|+.++. +.+.. .+++++++|+++.+++.++++ ++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-----EALAA--AGFTAVQLDVNDGAALARLAEELEAEHGGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHH--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 6899999999999999999999999999999986432 12211 246789999999999887764 579
Q ss_pred EEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 82 GVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 82 ~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
+||||||.. .+.+.+++++.+++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 139 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF--------------- 139 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC---------------
Confidence 999999853 223456778899999999999999988753 3478999999876644322
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.|.|++.+
T Consensus 140 -------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 182 (274)
T PRK05693 140 -------AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS 182 (274)
T ss_pred -------ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence 245999999999998888776 6999999999999998754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=177.06 Aligned_cols=174 Identities=18% Similarity=0.082 Sum_probs=134.5
Q ss_pred CCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCC--------cc--hhhhhhhcCCCCceEEEEcCCCCcch
Q 026852 5 EGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNS--------PK--TEHLRELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 5 ~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~--------~~--~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (232)
.+++|++|||||+| |||++++++|+++|++|++++|+... .. .+..+++.....++.++++|+++.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 47889999999994 99999999999999999988653210 00 01122333334678899999999999
Q ss_pred HHHhhc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccC
Q 026852 73 FDSAVD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLN 137 (232)
Q Consensus 73 ~~~~~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~ 137 (232)
+.++++ .+|++|||||.. .+.+.+.+++.+++|+.+++.+.+.+.+.+ ..++||++||..+..+.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 162 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM 162 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence 988875 369999999853 224456788899999999999998887764 24699999998665332
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
+. ...|+.+|++.+.+.+.++.+ +||++++|+||++.|++.
T Consensus 163 ~~----------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~ 206 (256)
T PRK12859 163 VG----------------------ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM 206 (256)
T ss_pred CC----------------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC
Confidence 21 144999999999999888876 589999999999999853
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=177.36 Aligned_cols=172 Identities=15% Similarity=0.129 Sum_probs=135.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
++|+++||||+|+||++++++|+++|++|++++|++++.. +..+.+.....++.++++|+++.+++.++++ +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALE-ALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999999999999999875332 2223333334578899999999999888765 4
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+|||+||... +.+.+.++..+++|+.++.++++.+.+.+ +.+++|++||..+..+...
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 151 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ------------ 151 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC------------
Confidence 799999998532 23445678889999999999999987753 3478999999866543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++.+ +|+++++++||++.||...
T Consensus 152 ----------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 152 ----------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD 194 (241)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence 244999999999998887765 4999999999999998743
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-25 Score=176.27 Aligned_cols=173 Identities=15% Similarity=0.122 Sum_probs=131.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCc--chHHHhh-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEE--GSFDSAV----- 77 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~--~~~~~~~----- 77 (232)
|++|+++||||+||||++++++|+++|++|++++|+++... +..+++.. ......++++|+++. +++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE-KVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHH-HHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 67799999999999999999999999999999999986432 22233322 123567889999753 3444433
Q ss_pred ---cCCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 78 ---DGCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 78 ---~~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
..+|+||||||... +.+.+++++.+++|+.+++++++++.+.+ +.+++|++||..+..+.+.
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------ 156 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAY------ 156 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCC------
Confidence 46799999998532 23345667889999999999999988753 3579999999765533211
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc----CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN----GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~----~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ++++++++||+|+||+..
T Consensus 157 ----------------~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~ 200 (239)
T PRK08703 157 ----------------WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI 200 (239)
T ss_pred ----------------ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc
Confidence 1349999999999999988874 699999999999999743
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=199.16 Aligned_cols=174 Identities=18% Similarity=0.155 Sum_probs=140.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.++++++|||||+||||++++++|+++|++|++++|+.++.. +..+.+.....++.++++|++|.+++.++++
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAE-RTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 356789999999999999999999999999999999875432 2223333334578999999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||... +.+.+.++..+++|+.|+.++++++.+.+ + .++||++||..++.+.+.
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------- 461 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS--------- 461 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC---------
Confidence 3799999999632 24456788999999999999999988764 2 369999999977644322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++.+
T Consensus 462 -------------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 504 (582)
T PRK05855 462 -------------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVA 504 (582)
T ss_pred -------------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchh
Confidence 245999999999999888876 4899999999999998654
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-25 Score=176.95 Aligned_cols=179 Identities=26% Similarity=0.312 Sum_probs=146.3
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC-cch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 83 (232)
++.||||||.|+||+|++.+|++.|+.|+++|--... ..+ +..+.+.....++.++++|++|.+.++++|+ ++|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 4789999999999999999999999999998742221 111 4445555556889999999999999999998 56999
Q ss_pred EEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
+|.|+... ..+-+.+...+..|+.|+.++++.+.++ +.+.+||.||+ +.|+.+. ..++.|+..-. .+.
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssa-tvYG~p~----~ip~te~~~t~-----~p~ 150 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSA-TVYGLPT----KVPITEEDPTD-----QPT 150 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecce-eeecCcc----eeeccCcCCCC-----CCC
Confidence 99998643 3456677899999999999999999998 69999999999 6677665 46666665433 123
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeC
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 197 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g 197 (232)
++|+.+|.+.|+.+..+...++.++..+|-.+++|
T Consensus 151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~g 185 (343)
T KOG1371|consen 151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIG 185 (343)
T ss_pred CcchhhhHHHHHHHHhhhccccceEEEEEeccccC
Confidence 66999999999999998888889999999999988
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=175.43 Aligned_cols=176 Identities=20% Similarity=0.255 Sum_probs=137.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|+++||||+|+||+++++.|+++|++|+++.|+..+......+++.....++.++++|+++.+++.++++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999999998888876532222233333335678899999999999888765
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+|||+||... ..+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+.++.+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~---------- 151 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG---------- 151 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC----------
Confidence 5799999998532 23345667889999999999999998753 3468999999866655332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+.+.++++ .++++++++||.+.++....
T Consensus 152 ------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~ 195 (248)
T PRK05557 152 ------------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA 195 (248)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence 134999999999888877765 48999999999998887543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-25 Score=180.35 Aligned_cols=189 Identities=19% Similarity=0.174 Sum_probs=134.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------CCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCD 81 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d 81 (232)
+|+++|||| ||||+++++.|+ +|++|++++|++++.. +..+++.....++.++++|++|.+++.++++ ++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLE-AAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 378999998 699999999996 7999999999875432 2333343334568899999999999988875 479
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCc---cccccCCCCChhh
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPD---VVIDETWFSNPVL 157 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~---~~~~e~~~~~~~~ 157 (232)
++|||||... ..+++++++++|+.++.++++++.+.+ ..+++|++||..+..+.......+ ...+........+
T Consensus 79 ~li~nAG~~~--~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T PRK06940 79 GLVHTAGVSP--SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF 156 (275)
T ss_pred EEEECCCcCC--chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence 9999999642 346789999999999999999998874 236788898886654321000000 0000000000000
Q ss_pred --cc---ccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 158 --CK---ENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 158 --~~---~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+. .....|+.||++.+.+.+.++.+ +||++++|+||++.|++..
T Consensus 157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~ 208 (275)
T PRK06940 157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ 208 (275)
T ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch
Confidence 00 01245999999999999888776 4899999999999999753
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=174.16 Aligned_cols=175 Identities=20% Similarity=0.197 Sum_probs=136.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch---hhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
+++|+++||||+||||+++++.|+++|++|++++|....... +..+++.....+++++.+|++|.+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999998775432211 2223333334578899999999999988874
Q ss_pred ---CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHH-hh---CCccEEEEecccceeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCA-KV---HSIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~-~~---~~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+|||+||... ..+.+.++..+++|+.++.++++++. +. .+.+++|++||..+..+...
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------- 156 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG------- 156 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC-------
Confidence 5799999998643 23445678889999999999999998 32 24578999999877654322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+.+.++.+ .++++++++||+++||+...
T Consensus 157 ---------------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~ 200 (249)
T PRK12827 157 ---------------QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN 200 (249)
T ss_pred ---------------CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence 134999999999988888776 48999999999999997543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=177.47 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=133.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhcC----CCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVDG----CDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~----~d~v 83 (232)
|+++||||+||||++++++|+++|++|++++|++++.. ...+++.. ...+++++++|++|.+++.+++++ +|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE-RLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHH-HHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 68999999999999999999999999999999875432 22222221 235789999999999999887763 6999
Q ss_pred EEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 84 FHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 84 i~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
||+||.... .+.+++.+.+++|+.++.++++++.+.+ +.+++|++||..+..+.+.
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 144 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS---------------- 144 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC----------------
Confidence 999985422 2334556789999999999999988753 4579999999866543221
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|+..+.+.+.++.+ .|+++++++||+++|++..
T Consensus 145 ------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~ 187 (243)
T PRK07102 145 ------NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA 187 (243)
T ss_pred ------CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh
Confidence 134999999999999888765 4899999999999998643
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-25 Score=178.33 Aligned_cols=172 Identities=22% Similarity=0.235 Sum_probs=134.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|+++||||+||||+++++.|+++|++|++++|+... . ...+++.....++.++++|+++.+++.++++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-E-KLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-H-HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 567999999999999999999999999999999998642 1 2223333234567899999999999988866
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceec-cCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAML-LNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~-~~~~~~~~~~~~~e 149 (232)
.+|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+.. +.+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------- 151 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG---------- 151 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC----------
Confidence 4699999999532 23345667789999999999999987753 346899999975421 1111
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.++ |+++++++||.++||+..
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~ 194 (263)
T PRK08226 152 ------------ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE 194 (263)
T ss_pred ------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHH
Confidence 1349999999999998888764 899999999999998753
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=176.08 Aligned_cols=173 Identities=17% Similarity=0.113 Sum_probs=134.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
++++++|||||+||||++++++|+++|++|++..|+........+..+.....++.++++|+++.+++.++++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999998877654322212223333334567889999999998888765
Q ss_pred CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 79 GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|+|||+||.... .+.+.+++.+++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 150 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG------------- 150 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC-------------
Confidence 57999999985321 2333457889999999999999998864 3368999999866543222
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.+++++ +++++.++||++.|++.
T Consensus 151 ---------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~ 191 (252)
T PRK06077 151 ---------LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLG 191 (252)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHH
Confidence 2459999999999999998875 79999999999999864
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=176.53 Aligned_cols=172 Identities=18% Similarity=0.185 Sum_probs=132.7
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++++++||||+||||++++++|+++|++|++++|++.... ...+++. .+++++|+++.+++.++++
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~ 76 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGK-AAADEVG-----GLFVPTDVTDEDAVNALFDTAAET 76 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999865322 1112221 2578999999999988876
Q ss_pred --CCCEEEEccccccc-------CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVIF-------LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+|||+||.... .+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+.++....
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~------ 150 (255)
T PRK06057 77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS------ 150 (255)
T ss_pred cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC------
Confidence 56999999985321 2234578899999999999999887643 45789999997665543210
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|++.+.+.+.++.+ .|+++++++||+++||....
T Consensus 151 ---------------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~ 194 (255)
T PRK06057 151 ---------------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQE 194 (255)
T ss_pred ---------------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhh
Confidence 134999999888888776665 48999999999999997543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=195.61 Aligned_cols=171 Identities=19% Similarity=0.227 Sum_probs=138.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
...+|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++..+++|++|++++.++++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK-KLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999864332 122222 3456789999999999988875
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|++|||||... +.+.+.+++++++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 410 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP----------- 410 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC-----------
Confidence 4799999998532 23456788999999999999999999875 3479999999977654332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +||++++|+||+|.||+..
T Consensus 411 -----------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~ 453 (520)
T PRK06484 411 -----------RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVL 453 (520)
T ss_pred -----------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhh
Confidence 144999999999999998887 4899999999999998753
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=174.98 Aligned_cols=159 Identities=15% Similarity=0.122 Sum_probs=127.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----CCCEEEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVFH 85 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~ 85 (232)
+++||||+||||+++++.|+++|++|++++|+.++.. +..+++ +++++++|++|.+++.++++ ++|++||
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~-~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLE-VAAKEL-----DVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhc-----cCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 6999999999999999999999999999999864322 111111 35688999999999988875 5799999
Q ss_pred cccccc--------c--CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 86 TASPVI--------F--LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 86 ~Ag~~~--------~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
|||+.. . .+.+.+++.+++|+.++.++++++.+.+ ..++||++||... + .
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~--~--------------- 136 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--P--A--------------- 136 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--C--C---------------
Confidence 998421 0 1246789999999999999999999865 3479999999741 1 1
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|++||++...+++.++.+ +||++++|+||++.||..
T Consensus 137 -------~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~ 178 (223)
T PRK05884 137 -------GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY 178 (223)
T ss_pred -------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh
Confidence 134999999999999888886 589999999999999864
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=173.75 Aligned_cols=165 Identities=19% Similarity=0.212 Sum_probs=132.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc-chHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~v 83 (232)
.+++|+++||||+|+||+++++.|+++|++|++++|++.... ..++.++++|++++ +++.+.+.++|+|
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~id~l 71 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------SGNFHFLQLDLSDDLEPLFDWVPSVDIL 71 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------CCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence 367799999999999999999999999999999999864311 24678999999987 5555556678999
Q ss_pred EEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 84 FHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 84 i~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
|||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 136 (235)
T PRK06550 72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG--------------- 136 (235)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC---------------
Confidence 9999853 123455778899999999999999988753 3468999999877654322
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++.++ |+++++++||+++||...
T Consensus 137 -------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~ 179 (235)
T PRK06550 137 -------GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA 179 (235)
T ss_pred -------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence 1348999999888888888764 899999999999999754
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=178.58 Aligned_cols=172 Identities=16% Similarity=0.137 Sum_probs=134.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
.++|+++||||+|+||++++++|+++|++|++++|+.+... +...++.....+++++++|+++.+++.++++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCE-ELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45689999999999999999999999999999999864322 2222333334568899999999999988775
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... +.+.+.++..+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----------- 155 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH----------- 155 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC-----------
Confidence 5699999998532 12345667788999999999999987642 3468999999865533211
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++++. |++++++|||.++|+..
T Consensus 156 -----------~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~ 197 (274)
T PRK07775 156 -----------MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMG 197 (274)
T ss_pred -----------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCccc
Confidence 1349999999999999988764 99999999999988853
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=173.96 Aligned_cols=169 Identities=15% Similarity=0.150 Sum_probs=130.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 82 (232)
+++|++|||||+|+||++++++|+++|++|+++.|+... ..+++.. ...++++++|++|.+++.++++ ++|+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~----~~~~l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 78 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD----AAERLAQ-ETGATAVQTDSADRDAVIDVVRKSGALDI 78 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH----HHHHHHH-HhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence 678999999999999999999999999999888764321 1111111 1135678999999998888775 4799
Q ss_pred EEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceec-cCCCCCCCccccccCCCCCh
Q 026852 83 VFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAML-LNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 83 vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~-~~~~~~~~~~~~~e~~~~~~ 155 (232)
+|||||... +.+.+++++.+++|+.+++++++.+.+.+ ..+++|++||..+.. +.+.
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------------- 142 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAG---------------- 142 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCC----------------
Confidence 999998532 23456789999999999999998888864 347999999975521 1111
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +|+++++|+||.+.|++..
T Consensus 143 ------~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~ 185 (237)
T PRK12742 143 ------MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP 185 (237)
T ss_pred ------CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence 134999999999999888876 4899999999999998753
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=174.06 Aligned_cols=172 Identities=21% Similarity=0.246 Sum_probs=142.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+..+|.|||||+-+|.|+.+|++|.+.|+.|++.+-.++..+ .+..... .++..-++.|++++++++++.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae--~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE--SLRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH--HHhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 467799999999999999999999999999999986655432 2222221 5788889999999999999865
Q ss_pred ---CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
+..++|||||... ..+.++++..+++|++|+.+++++++|.. ..+|+|++||+.+..+.+.
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~-------- 174 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPA-------- 174 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcc--------
Confidence 4589999999432 24457889999999999999999998863 4589999999988655433
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.++|+.||.+.+.+...+.+| +||+|.++-||.+.|+..+
T Consensus 175 --------------~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 175 --------------LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred --------------cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 366999999999999999888 5999999999999999876
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=175.24 Aligned_cols=173 Identities=18% Similarity=0.128 Sum_probs=133.7
Q ss_pred CCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCc---------ch-hhhhhhcCCCCceEEEEcCCCCcchH
Q 026852 6 GEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSP---------KT-EHLRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 6 ~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~---------~~-~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
+++|++|||||+| |||++++++|+++|++|++++|++... .. .....+.....+++++++|+++.+++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 5678999999995 899999999999999999999983211 10 11222333345689999999999998
Q ss_pred HHhhc-------CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCC
Q 026852 74 DSAVD-------GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNE 138 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~ 138 (232)
..+++ .+|+|||+||.... .+.+.+++.+++|+.++.++++++.+.+ ..+++|++||..+..+..
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~ 162 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP 162 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence 77765 46999999985322 2345678889999999999999988753 346999999986553322
Q ss_pred CCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 139 TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 139 ~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
. ...|+.+|++.+.+++.++.+ ++++++.++||.+.|++.
T Consensus 163 ~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~ 205 (256)
T PRK12748 163 D----------------------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWI 205 (256)
T ss_pred C----------------------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCC
Confidence 1 134999999999999888776 489999999999999864
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=164.43 Aligned_cols=169 Identities=15% Similarity=0.163 Sum_probs=135.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+.|-+||||||++|||+++++.|.+.|-+|++++|+.+ .+++.+.....++-+.||+.|.++..++++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~-----~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEE-----RLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHH-----HHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC
Confidence 56779999999999999999999999999999999984 344444445678889999999998777765
Q ss_pred CCCEEEEccccccc-------CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 GCDGVFHTASPVIF-------LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
..+++|||||.... ...++.+..+.+|++++.+++..++++. +...||++||..++.|...
T Consensus 78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~--------- 148 (245)
T COG3967 78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS--------- 148 (245)
T ss_pred chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc---------
Confidence 45999999995321 2233446778999999999999998862 4578999999988876544
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
.|.|+.+|++...+|+++.+++- ..+++|+-+.|..|.|+
T Consensus 149 -----~PvYcaTKAaiHsyt~aLR~Qlk-----~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 149 -----TPVYCATKAAIHSYTLALREQLK-----DTSVEVIELAPPLVDTT 188 (245)
T ss_pred -----cccchhhHHHHHHHHHHHHHHhh-----hcceEEEEecCCceecC
Confidence 56667777776677777666653 46899999999999997
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-24 Score=173.01 Aligned_cols=166 Identities=23% Similarity=0.249 Sum_probs=135.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d 81 (232)
+++++++||||+|+||++++++|+++|+ +|++++|+.++.. + ...+++++++|++|.+++.++++ .+|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id 75 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT-----D---LGPRVVPLQLDVTDPASVAAAAEAASDVT 75 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh-----h---cCCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence 5778999999999999999999999999 9999999875422 1 23578899999999999998887 479
Q ss_pred EEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|||+||.. ...+.+.+.+.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~------------- 142 (238)
T PRK08264 76 ILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN------------- 142 (238)
T ss_pred EEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC-------------
Confidence 999999862 123456678889999999999999987642 4578999999866543221
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++.+ .++++++++||.++|+...
T Consensus 143 ---------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~ 185 (238)
T PRK08264 143 ---------LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA 185 (238)
T ss_pred ---------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc
Confidence 245999999999999888876 3899999999999998643
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=175.43 Aligned_cols=172 Identities=17% Similarity=0.136 Sum_probs=132.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
..+|++|||||+||||+++++.|+++|++|++++|............+.....+++++++|++|.+++.++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999998887754322212223333334568899999999999988875
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
.+|+||||||... +.+.+.++..+++|+.++.++++++.+.+ ..+++|+++|.....+.+.
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~----------- 155 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD----------- 155 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC-----------
Confidence 3699999998532 23455678899999999999999988864 2468999888644322111
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+.+.++++. ++++++++||.+.++.
T Consensus 156 -----------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 156 -----------FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG 195 (258)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence 1359999999999999988874 5999999999998764
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=176.64 Aligned_cols=171 Identities=16% Similarity=0.122 Sum_probs=135.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------C
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------G 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~ 79 (232)
+++++++||||+||||.+++++|+++|++|++++|+++... +...++ ....++.++++|++|.+++.++++ .
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGG 80 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence 57799999999999999999999999999999999875432 222233 224578999999999999887765 5
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+|||+||... +.+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+..+...
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 148 (263)
T PRK09072 81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG------------ 148 (263)
T ss_pred CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC------------
Confidence 799999998532 23345668899999999999999988753 3478999999866544322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+.+.++.+ +|+++++++||.+.|+..
T Consensus 149 ----------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~ 190 (263)
T PRK09072 149 ----------YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMN 190 (263)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccch
Confidence 134999999999888888876 489999999999999864
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-24 Score=171.54 Aligned_cols=172 Identities=22% Similarity=0.232 Sum_probs=135.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+.+++++||||+|+||++++++|+++|++|++++|++++.. +..+++... .+++++++|+++.+++.++++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE-EAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHH-HHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999875332 233333322 568899999999999888776
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|+|||+||... +.+.+++++.+++|+.++.++++++.+.+ +.+++|++||..+..+...
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------ 149 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG------------ 149 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC------------
Confidence 6899999998642 23445567889999999999999988753 4568999999865432211
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ .|+++++++||.+.++...
T Consensus 150 ----------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~ 192 (237)
T PRK07326 150 ----------GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNG 192 (237)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccc
Confidence 244999999999888887655 5999999999999988653
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-25 Score=178.05 Aligned_cols=168 Identities=17% Similarity=0.127 Sum_probs=132.2
Q ss_pred EEEEECCCChhHHHHHHHHHH----CCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcCC---
Q 026852 10 VVCVTGASGFVASWLVKLLLQ----RGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDGC--- 80 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~--- 80 (232)
+++||||++|||++++++|++ .|++|++++|+++... +..+++.. ...++.++++|+++.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALR-QLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHH-HHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 689999999999999999997 7999999999876443 23333332 2346889999999999988876521
Q ss_pred --------CEEEEccccccc----C----CCCchhhhhHHHHHHHHHHHHHHHhhCC-----ccEEEEecccceeccCCC
Q 026852 81 --------DGVFHTASPVIF----L----SDNPQADIVDPAVMGTLNVLRSCAKVHS-----IKRVVLTSSIGAMLLNET 139 (232)
Q Consensus 81 --------d~vi~~Ag~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~vSS~~~~~~~~~ 139 (232)
|++|||||.... . +.+.+++.+++|+.+++++++.+.+.+. .++||++||..+..+.+.
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~ 160 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG 160 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence 589999985321 1 1346788999999999999999888642 268999999876544322
Q ss_pred CCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 140 PMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 140 ~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+ +||++++++||++.|++.
T Consensus 161 ----------------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~ 202 (256)
T TIGR01500 161 ----------------------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ 202 (256)
T ss_pred ----------------------chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH
Confidence 145999999999999998887 489999999999999875
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=174.12 Aligned_cols=174 Identities=18% Similarity=0.208 Sum_probs=132.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++++|||||+||||++++++|+++|++|++++|+..+........+... ...+.++++|++|.+++.++++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456899999999999999999999999999999987543221211222211 2458899999999999988876
Q ss_pred -CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+|||+||.... .+.+.++.++++|+.++.++++++.+.+ ..++++++++..+..+.+
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 151 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLK------------ 151 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCC------------
Confidence 47999999985321 2345678899999999999999998753 235677776643321111
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.||.+.+.+++.++.++ ++++++++||+++||...
T Consensus 152 ----------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~ 194 (249)
T PRK09135 152 ----------GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG 194 (249)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc
Confidence 12459999999999999998874 699999999999999854
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=173.88 Aligned_cols=174 Identities=22% Similarity=0.214 Sum_probs=137.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG----- 79 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 79 (232)
+|++|++|||||+|+||.+++++|+++|++|++++|++.+.. .....+.....+++++++|++|.+++.+++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAE-ALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 466789999999999999999999999999999999976432 22333333346788999999999998887763
Q ss_pred --CCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 80 --CDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 80 --~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
+|+|||+||.... .+.+.+++.++.|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~---------- 150 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG---------- 150 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC----------
Confidence 5999999985322 3345567889999999999999987642 4579999999866543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++++ .++++++++||.+++|...
T Consensus 151 ------------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 151 ------------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred ------------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 244899999999888888765 4899999999999998764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-24 Score=173.71 Aligned_cols=172 Identities=16% Similarity=0.124 Sum_probs=134.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-------
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+|+++||||+||||++++++|+++|++|++++|+++... +....+.. ...+++++++|+++.+++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE-ELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999875432 12222221 24578999999999998877765
Q ss_pred CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.... .+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 149 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG----------- 149 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-----------
Confidence 57999999985322 2344567789999999999999987642 4579999999877654321
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.||.+.+.+.+.++.+ .++++++++||++.|++..
T Consensus 150 ----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~ 193 (248)
T PRK08251 150 ----------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA 193 (248)
T ss_pred ----------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh
Confidence 0134999999999998888876 4899999999999998654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-24 Score=175.28 Aligned_cols=168 Identities=16% Similarity=0.160 Sum_probs=131.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-------
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+|++|||||+|+||++++++|+++|++|++++|+..... +..+.+... ..+++++++|+++.+++..+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAA-NVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999875432 222222211 2468899999999999887765
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++||+||.. .+.+.+.+++.+++|+.++.++++++.+.+ + .++||++||..+.++...
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~---------- 150 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH---------- 150 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC----------
Confidence 469999999853 223456678899999999999999988753 3 469999999765544221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 198 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~ 198 (232)
...|+.||++.+.+++.++.+ +|+++++++||.++++
T Consensus 151 ------------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 151 ------------NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence 144999999999999888864 6999999999987544
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-24 Score=178.21 Aligned_cols=191 Identities=19% Similarity=0.201 Sum_probs=140.3
Q ss_pred EEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEcccc
Q 026852 12 CVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTASP 89 (232)
Q Consensus 12 lItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~Ag~ 89 (232)
|||||+|+||++++++|+++|++|+++.+. .++|++|.+++.++++ ++|+|||+|+.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~ 59 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTYVILAAAK 59 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence 699999999999999999999988765322 1389999999999887 57999999986
Q ss_pred ccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc-hhHH
Q 026852 90 VIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK-EWYS 166 (232)
Q Consensus 90 ~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~y~ 166 (232)
... ....++.+.+++|+.++.++++++.+. +.+++|++||.. +|+... ..+.+|+.+.... ..+. .+|+
T Consensus 60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~-vyg~~~----~~~~~E~~~~~~~--~~p~~~~Y~ 131 (306)
T PLN02725 60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSC-IYPKFA----PQPIPETALLTGP--PEPTNEWYA 131 (306)
T ss_pred ecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCcee-ecCCCC----CCCCCHHHhccCC--CCCCcchHH
Confidence 432 223456678999999999999999887 778999999984 555322 2334554321110 1111 3499
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC---CcchHHHHHH----HHcCC----CCCCccceeeeec
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI---LNFGAEVILN----LINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~---~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~ 231 (232)
.||.++|++++.+.++++++++++||+.++||..... ....+..+.. ...+. .++++.+.|+|+|
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 207 (306)
T PLN02725 132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLH 207 (306)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecccc
Confidence 9999999999988888899999999999999974311 1122333322 23343 2678999999998
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=172.47 Aligned_cols=163 Identities=15% Similarity=0.140 Sum_probs=129.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+||||++++++|+++|++|++++|+++... +.+.. ..++++++|++|.+++.++++ ++|
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI----DGLRQ--AGAQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH----HHHHH--cCCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 68999999999999999999999999999999875321 22211 136789999999999887764 479
Q ss_pred EEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C--ccEEEEecccceeccCCCCCCCccccccCC
Q 026852 82 GVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S--IKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 82 ~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|||||... +.+.+.+++.+++|+.++..+++.+.+.+ + .++||++||..+..+.+.
T Consensus 77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------------ 144 (236)
T PRK06483 77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK------------ 144 (236)
T ss_pred EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC------------
Confidence 9999998531 13456788999999999999999988864 2 368999999865433221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~ 199 (232)
...|+.||++.+.+++.++.++ +||+++|+||++.++.
T Consensus 145 ----------~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~ 184 (236)
T PRK06483 145 ----------HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNE 184 (236)
T ss_pred ----------CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCC
Confidence 1449999999999999999884 6999999999997754
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=177.57 Aligned_cols=175 Identities=14% Similarity=0.068 Sum_probs=130.8
Q ss_pred CCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCcchh--hhh-----h---hcCC--CCceEEEEcCC--C
Q 026852 5 EGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTE--HLR-----E---LDGA--TERLHLFKANL--L 68 (232)
Q Consensus 5 ~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~--~~~-----~---~~~~--~~~~~~~~~D~--~ 68 (232)
.+++|++||||| ++|||+++++.|+++|++|++ +|+..+.+.. ... + .... ......+++|+ +
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 388999999999 899999999999999999998 6765443220 010 0 1000 11246788999 4
Q ss_pred Ccc------------------hHHHhhc-------CCCEEEEcccc-------cccCCCCchhhhhHHHHHHHHHHHHHH
Q 026852 69 EEG------------------SFDSAVD-------GCDGVFHTASP-------VIFLSDNPQADIVDPAVMGTLNVLRSC 116 (232)
Q Consensus 69 ~~~------------------~~~~~~~-------~~d~vi~~Ag~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~ 116 (232)
+.+ ++.++++ ++|++|||||. +.+.+.++|++++++|+.+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 444 5566554 47999999963 223556789999999999999999999
Q ss_pred HhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEc
Q 026852 117 AKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIH 191 (232)
Q Consensus 117 ~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~ 191 (232)
.+.|. .++||++||..+..+.+. + ...|+.||++.+.+.+.++.+ +|||+++|+
T Consensus 165 ~p~m~~~G~II~isS~a~~~~~p~-----------------~----~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~ 223 (303)
T PLN02730 165 GPIMNPGGASISLTYIASERIIPG-----------------Y----GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTIS 223 (303)
T ss_pred HHHHhcCCEEEEEechhhcCCCCC-----------------C----chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEe
Confidence 99752 389999999866543221 0 124999999999999998886 379999999
Q ss_pred cCceeCCCCC
Q 026852 192 PGTVIGPFFQ 201 (232)
Q Consensus 192 pg~v~g~~~~ 201 (232)
||++.|++..
T Consensus 224 PG~v~T~~~~ 233 (303)
T PLN02730 224 AGPLGSRAAK 233 (303)
T ss_pred eCCccCchhh
Confidence 9999999754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=178.02 Aligned_cols=188 Identities=19% Similarity=0.180 Sum_probs=143.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+.+++++|||||+|||++++++|+++|++|++.+|+.++.+ +..+++. ....++.++++|+++..++.++.+
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~-~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGE-EAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 467799999999999999999999999999999999986544 2333332 335778899999999999998865
Q ss_pred ---CCCEEEEccccccc---CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 ---GCDGVFHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
..|++|||||.+.. .+.+..+.++.+|.+|.+.+++.++|.+ ...|||++||..+ +..... +....+
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~--~~~~~~--~~l~~~ 186 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG--GGKIDL--KDLSGE 186 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc--cCccch--hhccch
Confidence 45999999997533 4567789999999999999999998863 2279999999866 111100 111111
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~ 202 (232)
.. ..|.. ...|+.||.+...+...++++. ||.+++++||.+.|+....
T Consensus 187 ~~---~~~~~--~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 187 KA---KLYSS--DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred hc---cCccc--hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence 11 00111 1249999999999998888875 7999999999999995444
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=172.38 Aligned_cols=170 Identities=20% Similarity=0.230 Sum_probs=132.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++++++||||+|+||+++++.|+++|+.|++.+|+.++.. +..... ..++.++++|+++.++++++++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLE-ALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999988888764322 111111 3467899999999999888754
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhh---CCccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... ..+.+.+++.+++|+.++.++++++.+. .+.++||++||..+.++.+.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 148 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG----------- 148 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC-----------
Confidence 5799999998532 2344677889999999999999988754 24579999999877655332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ .++++++++||++.|++..
T Consensus 149 -----------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~ 191 (245)
T PRK12936 149 -----------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG 191 (245)
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc
Confidence 133888888777777776665 4899999999999998754
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=172.62 Aligned_cols=174 Identities=23% Similarity=0.250 Sum_probs=136.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+.+|++|||||+|+||.++++.|+++|++|+++ +|++++.. .....+.....++.++++|++|.+++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQ-ELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 566899999999999999999999999999998 88765332 2223333234568899999999999888776
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+|||+||... +.+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+.++...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~---------- 151 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC---------- 151 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC----------
Confidence 6899999998642 23455678899999999999999988753 3468999999877654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|++.+.+++.++.+ .|+++++++||++.|+..+.
T Consensus 152 ------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~ 195 (247)
T PRK05565 152 ------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS 195 (247)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence 134899998888887777765 49999999999999886543
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=173.06 Aligned_cols=170 Identities=19% Similarity=0.238 Sum_probs=133.0
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCCEE
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDGV 83 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v 83 (232)
++||||+||||+++++.|+++|++|++++|+.+....+..+++.....++.++++|++|.+++.++++ .+|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999999998765432223344444445678999999999999888765 46999
Q ss_pred EEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHH-hh---CCccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 84 FHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCA-KV---HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 84 i~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~-~~---~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
|||||... ..+.++++.++++|+.++.++++++. +. .+.+++|++||..+.++.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------- 145 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG--------------- 145 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC---------------
Confidence 99998532 23556788999999999999998764 22 24579999999877765432
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+.+.++.+ +|+++++++||.+.|++...
T Consensus 146 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 189 (239)
T TIGR01831 146 -------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE 189 (239)
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh
Confidence 133888888888888777766 48999999999999998654
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=178.97 Aligned_cols=193 Identities=17% Similarity=0.196 Sum_probs=136.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
+|+++||||++|||+++++.|+++| ++|++++|+.++.. +..+++.....+++++++|+++.+++.++++ +
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAE-QAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999999 99999999875432 2333333334568889999999999887764 4
Q ss_pred CCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-----ccEEEEecccceeccCCC-CCCCcccc
Q 026852 80 CDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-----IKRVVLTSSIGAMLLNET-PMTPDVVI 147 (232)
Q Consensus 80 ~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~vSS~~~~~~~~~-~~~~~~~~ 147 (232)
+|++|||||... ..+.+.++.++++|+.++.++++.+.+.+. .++||++||..+..+... ...+...+
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 799999999532 123467788999999999999999888641 369999999866532111 00000000
Q ss_pred cc-C----CCCCh-----hhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCce-eCCCCC
Q 026852 148 DE-T----WFSNP-----VLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTV-IGPFFQ 201 (232)
Q Consensus 148 ~e-~----~~~~~-----~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v-~g~~~~ 201 (232)
.. . .+..+ .........|+.||.+...+.+.++++ .|+++++++||+| .|++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~ 230 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFR 230 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccc
Confidence 00 0 00000 000011244999999988888888765 3799999999999 588754
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=173.22 Aligned_cols=168 Identities=16% Similarity=0.169 Sum_probs=130.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC-CceEEEEcCCCCcchHHHhhc-------CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
|+++||||++|||++++++|+ +|++|++++|++++.+ +..+++.... .++.++++|++|.++++++++ ++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ-GLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH-HHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999998 5999999999876443 2333333322 357899999999999888764 57
Q ss_pred CEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccccCC
Q 026852 81 DGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 81 d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
|++|||||.... .+.+.+.+.+++|+.++.++++.+.+.+ + .++||++||..+..+.+.
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------ 146 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA------------ 146 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC------------
Confidence 999999996432 2333456778899999998888776653 2 479999999877644322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ +||++++++||++.|++.
T Consensus 147 ----------~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~ 188 (246)
T PRK05599 147 ----------NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT 188 (246)
T ss_pred ----------CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh
Confidence 134999999999999888887 489999999999999864
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-24 Score=172.51 Aligned_cols=165 Identities=18% Similarity=0.221 Sum_probs=130.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+++||||+||||+++++.|+++|++|++++|++++.. .....+ ..+++++++|++|.+++.++++ ++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999999875322 111111 2468899999999999888765 689
Q ss_pred EEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|||+||... ..+.+.+++.+++|+.++..+++.+.+.+ +.+++|++||..+..+...
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 143 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG------------- 143 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC-------------
Confidence 9999998531 23456778899999999999998887653 4579999999866543221
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.+|.+.+.+.+.++.+ ++|++++++||.+.|+.
T Consensus 144 ---------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 144 ---------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 145999999999999988876 48999999999998554
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=175.36 Aligned_cols=173 Identities=18% Similarity=0.180 Sum_probs=134.6
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..++++++|||||+|+||++++++|+++|++|++++|+++... +..+.... .++.++.+|++|++++..+++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALA-ATAARLPG--AKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999865322 22222221 257899999999999888765
Q ss_pred --CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc-cEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI-KRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+|||+||... ..+.+.+.+.+++|+.++.++++.+.+.+ +. ++++++||..+..+.+.
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~------- 156 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG------- 156 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC-------
Confidence 6799999998641 23445678999999999999999886642 33 57888888755443221
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ .++++++++||+++||+.+
T Consensus 157 ---------------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~ 199 (264)
T PRK12829 157 ---------------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR 199 (264)
T ss_pred ---------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence 134999999999999888776 4899999999999998753
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-24 Score=170.95 Aligned_cols=171 Identities=22% Similarity=0.252 Sum_probs=133.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+++||||+|+||+++++.|+++|++|++++|++.....+..........++.++++|+++.+++.++++ ++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999986421112222222234568999999999999888765 479
Q ss_pred EEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 82 GVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 82 ~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
++||+||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-------------- 148 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG-------------- 148 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC--------------
Confidence 999999853 234567788999999999999988876642 4579999999866543221
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ .|+++++++||++.||...
T Consensus 149 --------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 191 (245)
T PRK12824 149 --------QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVE 191 (245)
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchh
Confidence 134999999998888888764 4899999999999998754
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=169.44 Aligned_cols=160 Identities=21% Similarity=0.226 Sum_probs=129.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------CC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~ 80 (232)
++|+++||||+|+||++++++|+++|++|++++|++... . ...++++|++|.+++.++++ ++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 69 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-------F-----PGELFACDLADIEQTAATLAQINEIHPV 69 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-------c-----CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999987531 0 12478999999999888776 57
Q ss_pred CEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+|||+||.... .+.+++.+.+++|+.++.++++.+.+.+ +.++||++||.. .++...
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~------------- 135 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALD------------- 135 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCC-------------
Confidence 999999986422 2455678899999999999999887753 457999999984 333211
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||.+.|+...
T Consensus 136 ---------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~ 178 (234)
T PRK07577 136 ---------RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFR 178 (234)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccc
Confidence 244999999999998888766 4999999999999998753
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-24 Score=173.24 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=134.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
++++|||||+|+||+++++.|++.|++|++++|++.+.. ...+++.....++.++.+|++|.+++..+++ ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLA-SLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999865432 2333343334578899999999999888776 57
Q ss_pred CEEEEccccccc-----C-CCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVIF-----L-SDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~~-----~-~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+|||+||.... . +.+.+.+.+++|+.++.++++.+.+.+ ..+++|++||..+..+...
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 146 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT------------- 146 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC-------------
Confidence 999999985432 2 334467789999999999999987643 3578999999866543321
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+.+.++.+ +++++++++||.+.|++.
T Consensus 147 ---------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 188 (263)
T PRK06181 147 ---------RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIR 188 (263)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcc
Confidence 144999999999998887665 589999999999998864
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-24 Score=162.42 Aligned_cols=176 Identities=23% Similarity=0.249 Sum_probs=134.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEE-EEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVK-ATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------- 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------- 78 (232)
+.++||||++|||+.++++|++. |-+++ ...|++++.. +.++.......++|.++.|++..+++..+++
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~-~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAA-TELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhh-HHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 67999999999999999999977 55544 5567787642 3334444457899999999999998888765
Q ss_pred -CCCEEEEccccccc------CCCCchhhhhHHHHHHHHHHHHHHHhhCC---c-----------cEEEEecccceeccC
Q 026852 79 -GCDGVFHTASPVIF------LSDNPQADIVDPAVMGTLNVLRSCAKVHS---I-----------KRVVLTSSIGAMLLN 137 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~-----------~~iv~vSS~~~~~~~ 137 (232)
++|.+|||||.... .+...|.+++++|..++..+.|+++|... . ..|||+||.++..+.
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 55999999995432 33456889999999999999999988621 1 269999887665332
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
... .....|+.||++...+.+.++-+ .+|-++.+|||||.|.+.....
T Consensus 163 ~~~-------------------~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a 213 (249)
T KOG1611|consen 163 FRP-------------------GGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA 213 (249)
T ss_pred CCC-------------------cchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc
Confidence 221 11244999999999998888776 3788999999999999976543
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=175.21 Aligned_cols=170 Identities=18% Similarity=0.157 Sum_probs=130.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC-CceEEEEcCCCCcchHHHhhc-------CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
|+++||||+||||++++++|+++|++|++++|+++... +..+++.... ..+.++++|++|.+++.++++ ++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLA-QTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 47999999999999999999999999999999875332 2233332222 234568999999998877665 47
Q ss_pred CEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 81 DGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 81 d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
|+||||||.. .+.+.+.++..+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~------------ 147 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW------------ 147 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC------------
Confidence 9999999853 224556778899999999999999988754 2369999999865533221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++.+ ++|++++++||.++||+.+
T Consensus 148 ----------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~ 190 (272)
T PRK07832 148 ----------HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVN 190 (272)
T ss_pred ----------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh
Confidence 134899999888888777755 5899999999999998753
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-24 Score=174.61 Aligned_cols=170 Identities=22% Similarity=0.280 Sum_probs=135.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+++||||+|+||++++++|++.|++|++++|+.+... +...++.....++.++.+|++|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAK-ETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999999999999999864322 2333343335578899999999999888765 469
Q ss_pred EEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+||||||... +.+.+.+++.+++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 146 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI------------- 146 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC-------------
Confidence 9999998532 23456678899999999999998887642 2369999999877655332
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
.+.|+.+|.+.+.+++.++.+. ++++++++||.+.|++..
T Consensus 147 ---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~ 189 (254)
T TIGR02415 147 ---------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE 189 (254)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh
Confidence 2459999999999998887773 899999999999999754
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-24 Score=173.34 Aligned_cols=173 Identities=15% Similarity=0.080 Sum_probs=137.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|+++||||+|+||++++++|+++|++ |++++|++++.. +...++.....++.++++|+++++++.++++
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999 999999865432 2233333334578889999999999888765
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|+|||+||... +.+.+.++..+++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-------- 153 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF-------- 153 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC--------
Confidence 5799999998532 23456678889999999999999987753 1368999999866543221
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
.+.|+.+|.+.+.+++.++.++ +++++.++||+++|++.
T Consensus 154 --------------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 154 --------------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE 195 (260)
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence 1449999999999999888764 79999999999999864
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-24 Score=194.64 Aligned_cols=175 Identities=22% Similarity=0.208 Sum_probs=140.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|+++||||+||||+++++.|+++|++|++++|+++... +..+++.....++.++++|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALD-ELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 467899999999999999999999999999999999875432 2233333334578999999999999988876
Q ss_pred -CCCEEEEccccccc-----CC--CCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 -GCDGVFHTASPVIF-----LS--DNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~-----~~--~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.... .. .+.++..+++|+.++.++++++.+.+ +.++||++||.++..+.+.
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 518 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR-------- 518 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC--------
Confidence 57999999995321 11 24678899999999999999987754 4579999999866543221
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++..+
T Consensus 519 --------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~ 562 (657)
T PRK07201 519 --------------FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP 562 (657)
T ss_pred --------------cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence 244999999999999988877 48999999999999998653
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=163.63 Aligned_cols=174 Identities=17% Similarity=0.096 Sum_probs=143.7
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-- 79 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (232)
|-.++.|+.+++||+.-|||+++++.|++.|.+|+.+.|++.... ...+....-+..+.+|+++++.+.+++-.
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~----sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLL----SLVKETPSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHH----HHHhhCCcceeeeEecccHHHHHHHhhcccC
Confidence 455789999999999999999999999999999999999986432 22233344588999999999999888764
Q ss_pred -CCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHH----HHhhCCccEEEEecccceeccCCCCCCCcccccc
Q 026852 80 -CDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRS----CAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 80 -~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
+|.++||||. +...+.+.++.+|++|+.+..++.+. +.+....+.||++||.++..+..
T Consensus 77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~----------- 145 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLD----------- 145 (245)
T ss_pred chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccC-----------
Confidence 4999999994 45577889999999999999999887 44444567899999998776543
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
++..|+++|++.+.+.+.++.|. +|||+.+.|..|.|.+.+
T Consensus 146 -----------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~ 189 (245)
T KOG1207|consen 146 -----------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR 189 (245)
T ss_pred -----------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc
Confidence 25669999999999999998884 799999999999998754
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-24 Score=165.59 Aligned_cols=151 Identities=19% Similarity=0.143 Sum_probs=126.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~ 85 (232)
|+++||||+||||+++++.|+++ ++|++++|++. .+++|++|.++++++++ ++|++||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv~ 61 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVVS 61 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence 37999999999999999999999 99999998752 36799999999988877 6799999
Q ss_pred ccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 86 TASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 86 ~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|||.. .+.+.+++.+.+++|+.++.++++++.+.+ ..++|+++||..+..+.+.
T Consensus 62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~-------------------- 121 (199)
T PRK07578 62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPG-------------------- 121 (199)
T ss_pred CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCC--------------------
Confidence 99853 224556788999999999999999998864 4478999999866543322
Q ss_pred ccchhHHHHHHHHHHHHHHHHHh--cCCcEEEEccCceeCCCC
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKE--NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~--~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+.+.++.+ +|+++++|+||++.|++.
T Consensus 122 --~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~ 162 (199)
T PRK07578 122 --GASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE 162 (199)
T ss_pred --chHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh
Confidence 245999999999999998886 589999999999999853
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-23 Score=172.78 Aligned_cols=177 Identities=23% Similarity=0.293 Sum_probs=133.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~A 87 (232)
+||||||+|+||++++++|+++|++|++++|...... ..+..... ..+++++++|+++.+++.++++ ++|+|||+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP-EALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch-hhhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 4899999999999999999999999998876433211 11111111 1257889999999999999986 689999999
Q ss_pred ccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 88 SPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 88 g~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
|.... .....+.+.++.|+.++.++++++.+. +.+++|++||.. .++... ....+|+....+ ...|+
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~-~~g~~~----~~~~~e~~~~~~------~~~y~ 146 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAA-VYGEPS----SIPISEDSPLGP------INPYG 146 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchh-hcCCCC----CCCccccCCCCC------CCchH
Confidence 96432 233455678999999999999998876 678999999974 444322 122344432222 24599
Q ss_pred HHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCC
Q 026852 167 LAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~ 200 (232)
.+|.+++.+++.++++ .+++++++||+.++||..
T Consensus 147 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 181 (328)
T TIGR01179 147 RSKLMSERILRDLSKADPGLSYVILRYFNVAGADP 181 (328)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCC
Confidence 9999999999998877 799999999999999864
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=170.69 Aligned_cols=173 Identities=21% Similarity=0.239 Sum_probs=134.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++++++||||+|+||+++++.|+++|+.|++++|++.+.. ...+++.....++.++++|+++.+++.++++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLE-EAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999875432 2333333334578899999999998877655
Q ss_pred CCCEEEEcccccc--------------cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCC
Q 026852 79 GCDGVFHTASPVI--------------FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 79 ~~d~vi~~Ag~~~--------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~ 140 (232)
++|+|||+||... ..+.+.+..++++|+.++.++++.+.+.+ ..+++|++||.. .++.+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~- 159 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG- 159 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC-
Confidence 4699999998532 12345667889999999999988877653 235799998873 333221
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|++.+.+++.++.+ +|+++++++||.+.|++...
T Consensus 160 ---------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~ 203 (253)
T PRK08217 160 ---------------------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA 203 (253)
T ss_pred ---------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence 144999999999999998876 58999999999999987643
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=168.71 Aligned_cols=182 Identities=15% Similarity=0.127 Sum_probs=129.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+++|+++||||+||||++++++|+++|++|++++|++.... +.... . ...++++|++|.+++.+.+.++|++||
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~----~~~~~-~-~~~~~~~D~~~~~~~~~~~~~iDilVn 85 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS----ESNDE-S-PNEWIKWECGKEESLDKQLASLDVLIL 85 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh----hhhcc-C-CCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence 67899999999999999999999999999999999863211 11111 1 126789999999999999999999999
Q ss_pred ccccc--ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-----ccE-EEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 86 TASPV--IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-----IKR-VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 86 ~Ag~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~-iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
|||.. ...+.+++++.+++|+.++.++++++.+.+. .++ ++..||.++..+. .
T Consensus 86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~-~------------------ 146 (245)
T PRK12367 86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA-L------------------ 146 (245)
T ss_pred CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC-C------------------
Confidence 99853 2345677899999999999999999988641 133 4444554333211 1
Q ss_pred ccccchhHHHHHHHHHHHH---HHHHH---hcCCcEEEEccCceeCCCCCC---CCcchHHHHHHHHc
Q 026852 158 CKENKEWYSLAKTLAEEAA---WKFAK---ENGIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLIN 216 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~---~~~~~---~~~i~~~~v~pg~v~g~~~~~---~~~~~~~~~~~~~~ 216 (232)
...|++||++.+.+. +.++. +.+++++.++||.+.|++... ..+..++.+.+.+.
T Consensus 147 ----~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~~~~~~~~vA~~i~~~~~ 210 (245)
T PRK12367 147 ----SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPIGIMSADFVAKQILDQAN 210 (245)
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCccCCCCHHHHHHHHHHHHh
Confidence 134999999875433 22322 259999999999999886432 12334455455443
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.3e-24 Score=169.38 Aligned_cols=172 Identities=21% Similarity=0.176 Sum_probs=135.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+.+++|++|||||+|+||+++++.|+++|++|++++|++.+.. +..+++.. ..+.++.+|++|.+++.++++
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLS-QTLPGVPA--DALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHH-HHHHHHhh--cCceEEEeecCCHHHHHHHHHHHHHH
Confidence 3477899999999999999999999999999999999875432 22233322 346788899999999888776
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|+|||+||... ..+.+.+++.+++|+.++.++++++.+.+ +.+++|++||..+..+.+.
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------- 150 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG--------- 150 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC---------
Confidence 5799999998532 23345567889999999999999987642 5679999999866543211
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++++ .++++++++||+++++..
T Consensus 151 -------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~ 192 (239)
T PRK12828 151 -------------MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN 192 (239)
T ss_pred -------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcch
Confidence 134999999999888887765 589999999999999854
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-24 Score=172.03 Aligned_cols=164 Identities=22% Similarity=0.177 Sum_probs=130.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---------- 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------- 78 (232)
+++|||||+||||++++++|+++|++|++++|+..+. .. .....++.++++|+++.+++.++++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~---~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS---LA---AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh---hh---hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 4799999999999999999999999999999986531 11 1123568899999999999888542
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||... ..+.+.+++.+++|+.++..+++.+.+.+ +.++||++||..+..+...
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------- 146 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG--------- 146 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC---------
Confidence 3689999998532 12345678999999999999998887764 3479999999866533221
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh--cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~--~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.+ .++++++|+||++.||+.
T Consensus 147 -------------~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~ 187 (243)
T PRK07023 147 -------------WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQ 187 (243)
T ss_pred -------------chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHH
Confidence 245999999999999988875 589999999999999863
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-24 Score=171.33 Aligned_cols=168 Identities=21% Similarity=0.228 Sum_probs=134.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 82 (232)
+++++++||||+|+||+++++.|+++|++|++++|++++.. ++.. ..+..++++|+++.+++.++++ ++|+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~-----~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~ 80 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALD-----RLAG-ETGCEPLRLDVGDDAAIRAALAAAGAFDG 80 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-----HHHH-HhCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence 67899999999999999999999999999999999864321 1111 1135678999999999888876 4799
Q ss_pred EEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 83 VFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 83 vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
|||+||... +.+.+++++.+++|+.++.++++++.+.+ + .++||++||..+.++...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------- 146 (245)
T PRK07060 81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD-------------- 146 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC--------------
Confidence 999998532 23445678889999999999999988753 1 369999999876654322
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ .++++++++||+++|+...
T Consensus 147 --------~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 147 --------HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred --------CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence 134999999999999988876 4899999999999999753
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=174.84 Aligned_cols=214 Identities=24% Similarity=0.301 Sum_probs=155.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++.+++||||+||+|.+++++|++++ .+|.++|..+..... ..+.......++.++++|+.|.-.+..++.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~-~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNL-PAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccccc-chhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 45799999999999999999999998 789999887753211 11111113578999999999999999999999 666
Q ss_pred Eccc-ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 85 HTAS-PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 85 ~~Ag-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|+|+ +.......+.+..+++|+.||.+++++|.+. +++++|++||....++... ....++..+.| .....
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~-----~~n~~E~~p~p---~~~~d 151 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEP-----IINGDESLPYP---LKHID 151 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCee-----cccCCCCCCCc---ccccc
Confidence 6664 4444445567899999999999999999998 8999999999977765432 23334444444 11224
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCCCCccceeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (232)
.|+.||+.+|.++.......++..+++||..||||+.....+.+...+....-=...++++-+-+|.|
T Consensus 152 ~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~ 219 (361)
T KOG1430|consen 152 PYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTY 219 (361)
T ss_pred ccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEE
Confidence 59999999999998766556799999999999999976655443333322111114444444445443
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-24 Score=170.53 Aligned_cols=171 Identities=19% Similarity=0.222 Sum_probs=130.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-------C
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-------C 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~ 80 (232)
++++||||+||||++++++|+++|++|++. .|++++.. +...++.....+++++++|++|.+++.+++++ +
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQ-EVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHH-HHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999999999999875 45543221 22233333345688999999999999888763 5
Q ss_pred CEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC------CccEEEEecccceeccCCCCCCCccccc
Q 026852 81 DGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH------SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 81 d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
|+|||+||... +.+.++++..+++|+.++.++++++.+.+ ..+++|++||..+.++.+..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~-------- 152 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE-------- 152 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc--------
Confidence 89999998532 12344667899999999999998887753 13579999998766543220
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|...+.+++.++.+ +|+++++++||.++||+..
T Consensus 153 -------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 153 -------------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred -------------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence 023999999999988887765 4999999999999999753
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=171.49 Aligned_cols=169 Identities=18% Similarity=0.170 Sum_probs=124.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHH----Hhh------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFD----SAV------ 77 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~----~~~------ 77 (232)
++++||||+||||++++++|+++|++|++++|+.........+++.. ...++.++++|++|.+++. +++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999876542222222333322 1345778999999998653 322
Q ss_pred -cCCCEEEEccccccc-----CCC-----------CchhhhhHHHHHHHHHHHHHHHhhCC---------ccEEEEeccc
Q 026852 78 -DGCDGVFHTASPVIF-----LSD-----------NPQADIVDPAVMGTLNVLRSCAKVHS---------IKRVVLTSSI 131 (232)
Q Consensus 78 -~~~d~vi~~Ag~~~~-----~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~vSS~ 131 (232)
.++|+||||||.... .+. ..+.+.+++|+.+++.+++++.+.+. .+++|++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 358999999985321 111 13678899999999999999877641 1468888887
Q ss_pred ceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 132 GAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 132 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
.+..+.+. ...|+.||.+.+.+.+.++.+ +||++++|+||++.+|.
T Consensus 162 ~~~~~~~~----------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~ 210 (267)
T TIGR02685 162 MTDQPLLG----------------------FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD 210 (267)
T ss_pred hccCCCcc----------------------cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence 55432211 245999999999999998887 59999999999998763
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-24 Score=176.12 Aligned_cols=178 Identities=15% Similarity=0.087 Sum_probs=126.6
Q ss_pred CCCCCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCC---------CCcchhhhhhhcCCCC-----ceEEEE
Q 026852 1 MMSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDP---------NSPKTEHLRELDGATE-----RLHLFK 64 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~-----~~~~~~ 64 (232)
||+..+++|++|||||+ +|||+++++.|+++|++|++.+|.+ +......... ..... ++..+.
T Consensus 1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 79 (299)
T PRK06300 1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRK-LSNGSLLTFAKIYPMD 79 (299)
T ss_pred CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhccccccccccc-ccccchhhhhhHHHhh
Confidence 68888999999999996 9999999999999999999977542 1100000000 00001 011123
Q ss_pred cCCCCcc------------------hHHHhhc-------CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHH
Q 026852 65 ANLLEEG------------------SFDSAVD-------GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNV 112 (232)
Q Consensus 65 ~D~~~~~------------------~~~~~~~-------~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l 112 (232)
.|+++.+ ++.++++ ++|++|||||.. .+.+.++|++.+++|+.+++++
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l 159 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL 159 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 3443333 2444433 579999999742 2345678899999999999999
Q ss_pred HHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcE
Q 026852 113 LRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDL 187 (232)
Q Consensus 113 ~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~ 187 (232)
++++.+.+ ..++||++||..+..+.+. + ..+|+.||++.+.+++.++.+ +|||+
T Consensus 160 ~~a~~p~m~~~G~ii~iss~~~~~~~p~-----------------~----~~~Y~asKaAl~~lt~~la~el~~~~gIrV 218 (299)
T PRK06300 160 LSHFGPIMNPGGSTISLTYLASMRAVPG-----------------Y----GGGMSSAKAALESDTKVLAWEAGRRWGIRV 218 (299)
T ss_pred HHHHHHHhhcCCeEEEEeehhhcCcCCC-----------------c----cHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 99999976 3478999998866543321 0 125999999999999888876 38999
Q ss_pred EEEccCceeCCCC
Q 026852 188 VAIHPGTVIGPFF 200 (232)
Q Consensus 188 ~~v~pg~v~g~~~ 200 (232)
++|+||.+.|++.
T Consensus 219 n~V~PG~v~T~~~ 231 (299)
T PRK06300 219 NTISAGPLASRAG 231 (299)
T ss_pred EEEEeCCccChhh
Confidence 9999999999875
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-24 Score=171.09 Aligned_cols=169 Identities=19% Similarity=0.183 Sum_probs=130.3
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-------cCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------DGC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~ 80 (232)
+|++|||||+|+||+++++.|+++|++|++++|+++... ...+.+.....++.++++|++|.+++..++ .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAE-AAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999999999999875332 222233333457899999999999766554 357
Q ss_pred CEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+|||+||.... .+.+++++.++.|+.++..+++.+.+.+ +.+++|++||..+..+.+.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~------------- 146 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF------------- 146 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC-------------
Confidence 999999985321 2344567888999999999999886542 4579999999866543221
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.+|.+.+.+++.++.+ .+++++.++||.++||.
T Consensus 147 ---------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 147 ---------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 134889998888888877665 48999999999999986
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=169.25 Aligned_cols=172 Identities=19% Similarity=0.207 Sum_probs=132.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+|+||+++++.|+++|++|+++.|.......+...+......++.++++|++|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999999999998832211112222232234578899999999998877765 479
Q ss_pred EEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 82 GVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 82 ~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
+||||||... ..+.+++++.+++|+.++..+++.+.+.+ +.+++|++||..+..+...
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-------------- 146 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG-------------- 146 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC--------------
Confidence 9999998532 23455778889999999999988887653 4579999999865543221
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+.+.++++ .|++++.++||++.||....
T Consensus 147 --------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 190 (242)
T TIGR01829 147 --------QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA 190 (242)
T ss_pred --------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc
Confidence 134999999888888887765 48999999999999987643
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=187.04 Aligned_cols=170 Identities=19% Similarity=0.223 Sum_probs=137.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
.++|+++||||++|||+++++.|+++|++|++++|+.++.. +..+++ ..++.++++|++|++++.++++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR-ERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999999999999875432 222222 3467889999999999888765
Q ss_pred CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---Ccc-EEEEecccceeccCCCCCCCcccc
Q 026852 79 GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIK-RVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~-~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+++++.+++|+.++..+++++.+.+ +.+ +||++||..+..+.+.
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~-------- 150 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK-------- 150 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC--------
Confidence 479999999852 124456788999999999999999998874 333 9999999877654332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+.+.++.+ +++++++|+||.+.||+..
T Consensus 151 --------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~ 193 (520)
T PRK06484 151 --------------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVA 193 (520)
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhh
Confidence 244999999999999888887 4899999999999998753
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=169.62 Aligned_cols=168 Identities=21% Similarity=0.156 Sum_probs=131.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|+++||||+|+||++++++|+++|++|++++|++++.. ...+.+. ..+++++++|++|.+++..+++ ++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALA-AFADALG--DARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999875432 2222232 3468899999999999988776 47
Q ss_pred CEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+|||+||.... .+.+.+...+++|+.++.++++++.+.+ +.++||++||..+..+. .
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~------------- 144 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G------------- 144 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C-------------
Confidence 999999985321 2345567778899999999999986642 45789999997543211 0
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.++ |+++++++||+++|+...
T Consensus 145 ---------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 145 ---------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE 187 (257)
T ss_pred ---------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence 1239999999999999988764 799999999999999754
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=164.63 Aligned_cols=170 Identities=21% Similarity=0.224 Sum_probs=132.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----CCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~v 83 (232)
|+++||||+|+||++++++|+++|++|++++|++.... .+... .++.++++|++|++++.++++ ++|+|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~v 75 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT--ALQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRFDLL 75 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH--HHHhc----cccceEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence 68999999999999999999999999999999986432 22222 357788999999999888776 47999
Q ss_pred EEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 84 FHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 84 i~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
|||||... +.+.+++++.+++|+.++.++++++.+.+ +.++++++||..+..+... .
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--------------~ 141 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--------------G 141 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--------------C
Confidence 99998532 23345678889999999999999988764 2368889988744432111 0
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.....|+.+|.+.+.+++.++.+ +++++++++||++.|++....
T Consensus 142 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~ 188 (225)
T PRK08177 142 -----GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN 188 (225)
T ss_pred -----CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC
Confidence 01134999999999999988876 489999999999999986543
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=170.36 Aligned_cols=166 Identities=19% Similarity=0.153 Sum_probs=130.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhcCC-------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVDGC------- 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~------- 80 (232)
|++|||||+||||++++++|+++|++|++++|++.+. ++.+. ....+++++++|+++.+++.++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE----LTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH----HHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 6899999999999999999999999999999987321 11111 12357889999999999998887632
Q ss_pred ----CEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccc
Q 026852 81 ----DGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 81 ----d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
+++|||||.. .+.+.+.+.+.+++|+.++..+++.+.+.+ ..++||++||..+..+.+.
T Consensus 78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------- 150 (251)
T PRK06924 78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG------- 150 (251)
T ss_pred cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC-------
Confidence 1789999853 134456778889999999999998887763 2368999999865433221
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+++.++.+ +++++++|+||++.|++.
T Consensus 151 ---------------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~ 194 (251)
T PRK06924 151 ---------------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQ 194 (251)
T ss_pred ---------------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhH
Confidence 245999999999999988876 479999999999999864
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=174.76 Aligned_cols=187 Identities=17% Similarity=0.184 Sum_probs=131.4
Q ss_pred EEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCCEE
Q 026852 12 CVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDGV 83 (232)
Q Consensus 12 lItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v 83 (232)
+||||++|||++++++|+++| ++|++++|+.++.. +..+++.....++.++++|++|.+++.++++ ++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAE-RAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 699999999999999999999 99999999875432 2333333334568889999999999888764 47999
Q ss_pred EEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C--ccEEEEecccceeccCCCC-CCCc---ccc-
Q 026852 84 FHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S--IKRVVLTSSIGAMLLNETP-MTPD---VVI- 147 (232)
Q Consensus 84 i~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~vSS~~~~~~~~~~-~~~~---~~~- 147 (232)
|||||... ..+.+.++.++++|+.|+.++++.+.+.+ + .++||++||..+..+.... .++. ...
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 99998532 13456788999999999999999988864 2 4799999998664321100 0000 000
Q ss_pred -------ccCC---CCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCce-eCCCCC
Q 026852 148 -------DETW---FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTV-IGPFFQ 201 (232)
Q Consensus 148 -------~e~~---~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v-~g~~~~ 201 (232)
++.. +....+ .....|+.||.+...+.+.++++ .||++++++||+| .|++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~--~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~ 226 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEF--DGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFR 226 (308)
T ss_pred hhhcccCCccchhhccccCC--cHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccc
Confidence 0000 000000 11244999999977777777775 4799999999999 677754
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=168.07 Aligned_cols=172 Identities=18% Similarity=0.175 Sum_probs=131.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCC--CcchHHHhh----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLL--EEGSFDSAV---- 77 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~--~~~~~~~~~---- 77 (232)
.+++|+++||||+|+||.+++++|++.|++|++++|+.++.. ...+++.. ...++.++++|++ +.+++.+++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLE-AVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999875432 22223322 2346778888886 555544443
Q ss_pred ---cCCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 78 ---DGCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 78 ---~~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
.++|+|||+||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~------ 161 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN------ 161 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC------
Confidence 36799999998532 23446778899999999999999987642 5679999999866544322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~ 199 (232)
...|+.||++.+.+++.++.+. ++++++++||.+.++.
T Consensus 162 ----------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~ 202 (247)
T PRK08945 162 ----------------WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202 (247)
T ss_pred ----------------CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence 1349999999999998887764 8999999999998875
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=168.03 Aligned_cols=199 Identities=18% Similarity=0.185 Sum_probs=141.9
Q ss_pred EEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----CCCEEEE
Q 026852 11 VCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVFH 85 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~ 85 (232)
||||||+|+||+++++.|+++|+ +|++++|..... .+..+. ...+..|+++.+.++.+.+ ++|+|||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~~~~~~-----~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH---KFLNLA-----DLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch---hhhhhh-----heeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 69999999999999999999998 788887765321 111111 1356788888888777654 7999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
+|+... ....++...+++|+.++.++++++.+. +. ++|++||.. .|+... ....|+..+. ...+.|
T Consensus 73 ~A~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~-vy~~~~-----~~~~e~~~~~-----~p~~~Y 138 (314)
T TIGR02197 73 QGACSD-TTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAA-TYGDGE-----AGFREGRELE-----RPLNVY 138 (314)
T ss_pred CccccC-ccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHH-hcCCCC-----CCcccccCcC-----CCCCHH
Confidence 998643 334566788999999999999999886 44 899999984 554332 1122322111 123569
Q ss_pred HHHHHHHHHHHHHHHHh--cCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---C------CCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKE--NGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---I------YSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~--~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~------~~~~~~~~~~~~ 231 (232)
+.+|..+|.+++.+..+ .+++++++||+.++||...... .....++.+...++ + +++|++.|+|+|
T Consensus 139 ~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 218 (314)
T TIGR02197 139 GYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVY 218 (314)
T ss_pred HHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEE
Confidence 99999999998775432 3689999999999999854321 23344555555555 2 367889999998
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=161.28 Aligned_cols=183 Identities=17% Similarity=0.129 Sum_probs=138.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----CCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~v 83 (232)
++++||||+|+||++++++|+++|++|++++|+++.. +++.. ..++++++|+++.++++++++ ++|++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~-----~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~v 74 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-----AALQA--LGAEALALDVADPASVAGLAWKLDGEALDAA 74 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH-----HHHHh--ccceEEEecCCCHHHHHHHHHHhcCCCCCEE
Confidence 5899999999999999999999999999999986532 12221 135689999999999988643 47999
Q ss_pred EEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 84 FHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 84 i~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
||+||... +.+.++++..+++|+.++.++++++.+.+ ..++++++||..+.++....
T Consensus 75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------- 140 (222)
T PRK06953 75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG-------------- 140 (222)
T ss_pred EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC--------------
Confidence 99998642 12456778999999999999999998854 23689999998665542210
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhc-CCcEEEEccCceeCCCCCCCCc----chHHHHHHHHcC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQPILN----FGAEVILNLING 217 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-~i~~~~v~pg~v~g~~~~~~~~----~~~~~~~~~~~~ 217 (232)
.....|+.+|...+.+++.++.++ +++++.++||+++|++.+.... .....+.+.+..
T Consensus 141 -----~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~ 203 (222)
T PRK06953 141 -----TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGAQAALDPAQSVAGMRRVIAQ 203 (222)
T ss_pred -----CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 001249999999999999888775 8999999999999998654322 234455555443
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=166.17 Aligned_cols=169 Identities=19% Similarity=0.213 Sum_probs=132.5
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCCEE
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDGV 83 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v 83 (232)
+||||++|+||.++++.|+++|++|++++|+...........+.....+++++++|++|.++++++++ .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999976322212222333334568899999999999888775 36999
Q ss_pred EEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 84 FHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 84 i~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
||+||... +.+.+.+++.+++|+.++.++++++.+.+ +.+++|++||..+.++.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~---------------- 144 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG---------------- 144 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC----------------
Confidence 99999642 23446678899999999999999988752 4569999999877765432
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+.+.++.+ .|+++++++||.+.++...
T Consensus 145 ------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~ 187 (239)
T TIGR01830 145 ------QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD 187 (239)
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence 134999999999888887776 5999999999999887643
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-23 Score=165.89 Aligned_cols=170 Identities=14% Similarity=0.110 Sum_probs=128.2
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+++||||+||||+++++.|+++|++|++++|+......+..+.+... ...+..+++|++|.+++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 38999999999999999999999999999998322221222222221 2235568999999999887765 56
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+||||||... +.+.+++++.+++|+.++..+++.+.+.+ +.++||++||..+..+...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~------------- 147 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD------------- 147 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC-------------
Confidence 99999998542 23445678889999998877777776653 4579999999977654322
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc-----CCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-----~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+. +++++.++||++.||...
T Consensus 148 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~ 192 (251)
T PRK07069 148 ---------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD 192 (251)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence 1349999999999888887762 599999999999999864
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=165.46 Aligned_cols=165 Identities=18% Similarity=0.184 Sum_probs=131.1
Q ss_pred EEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC---CCEEEEccc
Q 026852 12 CVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG---CDGVFHTAS 88 (232)
Q Consensus 12 lItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~Ag 88 (232)
|||||+||||++++++|+++|++|++++|+++... ...+++. ...+++++.+|++|.+++.++++. +|++||+||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLA-AAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 69999999999999999999999999999864322 2222222 145688999999999999998874 699999998
Q ss_pred ccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 89 PVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 89 ~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
... +.+.+.+++++++|+.++.+++++.... +.++||++||..+..+.+. ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~~----------------------~~ 135 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSAS----------------------GV 135 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCCc----------------------ch
Confidence 532 2345678899999999999999944332 5689999999976644322 24
Q ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEccCceeCCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~-~i~~~~v~pg~v~g~~~~ 201 (232)
.|+.+|.+.+.+.+.++.+. ++++++++||++.||+..
T Consensus 136 ~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~ 174 (230)
T PRK07041 136 LQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWS 174 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHH
Confidence 59999999999999988874 799999999999998754
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=163.87 Aligned_cols=176 Identities=21% Similarity=0.249 Sum_probs=136.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc-chhhhhhhcCCC-CceEEEEcCCCC-cchHHHhhc---
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGAT-ERLHLFKANLLE-EGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~--- 78 (232)
++++|++|||||++|||+++++.|+++|++|++..|+.... .....+...... ..+.+.++|+++ .++++.+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 46779999999999999999999999999999888886542 111222222111 367888999998 888877765
Q ss_pred ----CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccc
Q 026852 79 ----GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ----~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.+++.+++|+.++..+++.+.+.+..++||++||..+. +....
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~-------- 152 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG-------- 152 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--------
Confidence 479999999953 23456788999999999999999977776433399999999765 43220
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+.+.++.+ +||++++|+||.+.|++...
T Consensus 153 -------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~ 196 (251)
T COG1028 153 -------------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAA 196 (251)
T ss_pred -------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhh
Confidence 134999999999998888865 58999999999999988754
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=166.41 Aligned_cols=181 Identities=20% Similarity=0.174 Sum_probs=132.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC--CEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC--DGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~A 87 (232)
+||||||+|+||++++++|+++|++|++++|+ .+|+.+.+++.++++++ |+|||+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~d~vi~~a 58 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAIRPDAVVNTA 58 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence 48999999999999999999999999999875 37889999999999865 9999999
Q ss_pred ccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 88 SPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 88 g~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
+.... .....+...+++|+.++.++++++.+. + .++|++||. ..|+... ..+.+|+..+.+ ...|+
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~Ss~-~vy~~~~----~~~~~E~~~~~~------~~~Y~ 125 (287)
T TIGR01214 59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARH-G-ARLVHISTD-YVFDGEG----KRPYREDDATNP------LNVYG 125 (287)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEeee-eeecCCC----CCCCCCCCCCCC------cchhh
Confidence 86432 223456778999999999999998876 4 489999998 4443321 233445443332 25699
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
.+|..+|.+++.+ +.+++++||+.++||.... .....++.....+. +...+.+.++|+|
T Consensus 126 ~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 185 (287)
T TIGR01214 126 QSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTY 185 (287)
T ss_pred HHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcC
Confidence 9999999988653 6899999999999998421 22333444444443 2222335666665
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-23 Score=167.08 Aligned_cols=182 Identities=25% Similarity=0.319 Sum_probs=110.5
Q ss_pred EECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcch-hhh-hhhc----------CCCCceEEEEcCCCCc------ch
Q 026852 13 VTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT-EHL-RELD----------GATERLHLFKANLLEE------GS 72 (232)
Q Consensus 13 ItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~-~~~-~~~~----------~~~~~~~~~~~D~~~~------~~ 72 (232)
|||||||+|++++.+|++.+. +|+++.|+.+.... +.+ +.+. ....+++++.+|++++ ++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999976 89999998754221 222 1111 1157899999999875 46
Q ss_pred HHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 73 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+..+.+++|+|||+|+..... .+..+..++|+.|+.++++.+... ..++++|+||. ...+......++....++.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~--~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa-~v~~~~~~~~~~~~~~~~~- 155 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFN--APYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTA-YVAGSRPGTIEEKVYPEEE- 155 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEG-GGTTS-TTT--SSS-HHH--
T ss_pred hhccccccceeeecchhhhhc--ccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccc-cccCCCCCccccccccccc-
Confidence 777778999999999876442 244567899999999999999865 45699999993 4433322111110000000
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
..........+.|..||+++|.+++.+.++.|++++++|||.|.|..
T Consensus 156 ~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~ 202 (249)
T PF07993_consen 156 DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDS 202 (249)
T ss_dssp -EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SS
T ss_pred ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccC
Confidence 00111122245699999999999999988889999999999999943
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=177.90 Aligned_cols=171 Identities=21% Similarity=0.263 Sum_probs=127.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-------C--CCCceEEEEcCCCCcchHHH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-------G--ATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------~--~~~~~~~~~~D~~~~~~~~~ 75 (232)
+.++|+||||||+||||++++++|++.|++|++++|+.++... ..+.+. . ...+++++++|++|.+++.+
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~-l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAES-LVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 3577999999999999999999999999999999999865321 111111 0 12358899999999999999
Q ss_pred hhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceec-cCCCCCCCccccccCCCCC
Q 026852 76 AVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAML-LNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 76 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~-~~~~~~~~~~~~~e~~~~~ 154 (232)
++.++|+|||+||.... ...++...+++|+.|+.++++++.+. +.+|||++||.++.. +...
T Consensus 156 aLggiDiVVn~AG~~~~-~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g~p~--------------- 218 (576)
T PLN03209 156 ALGNASVVICCIGASEK-EVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVGFPA--------------- 218 (576)
T ss_pred HhcCCCEEEEccccccc-cccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccCccc---------------
Confidence 99999999999986432 12345677899999999999999887 789999999986531 1100
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
..+ ..+ ..|...|..++..+. +.|+++++||||++.|+.
T Consensus 219 ~~~-~sk-~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 219 AIL-NLF-WGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPT 257 (576)
T ss_pred cch-hhH-HHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCc
Confidence 001 112 225556666665542 579999999999998874
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-23 Score=185.86 Aligned_cols=170 Identities=21% Similarity=0.214 Sum_probs=134.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.+... ...+.+.. ...++..+++|++|.+++.++++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~-~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAE-AVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999875432 12222221 12457789999999999988876
Q ss_pred ---CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... ..+.+.++..+++|+.++.++++.+.+.+ + .++||++||..+.++...
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~------- 562 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN------- 562 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC-------
Confidence 5799999999532 23345678899999999999988877653 2 368999999877654322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIG 197 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g 197 (232)
...|+.||++.+.+++.++.+ +||++++|+||.|.+
T Consensus 563 ---------------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~ 601 (676)
T TIGR02632 563 ---------------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ 601 (676)
T ss_pred ---------------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence 255999999999999998887 489999999999974
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=163.07 Aligned_cols=172 Identities=20% Similarity=0.212 Sum_probs=132.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++++++||||+|+||+++++.|+++|++|++++|++++.. ...+.+.. ..+++++++|+++.+++.++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLK-RMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999875332 11122222 2368899999999998887665
Q ss_pred CCCEEEEccccccc---CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 79 GCDGVFHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
++|.+||++|.... ...+.++..+++|+.++.++++.+.+.+ ..+++|++||..+..+...
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------- 145 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP--------------- 145 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC---------------
Confidence 36999999985322 1124567788999999999999998864 2368999998755432111
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
....|+.+|.+.+.+++.++.+. ++++++++||+++|+..
T Consensus 146 ------~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~ 188 (238)
T PRK05786 146 ------DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE 188 (238)
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence 11349999999999988888763 99999999999999853
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-23 Score=187.53 Aligned_cols=168 Identities=24% Similarity=0.249 Sum_probs=135.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+.+|++|||||+|+||+++++.|+++|++|++++|+++... ...+.+... .++.++++|++|.+++.++++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~-~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAE-AAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHH-HHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999875432 222233222 478899999999999888775
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|+||||||... ..+.+.++..+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--------- 567 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--------- 567 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC---------
Confidence 5799999998532 24566788999999999999999887753 2 279999999877654322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCcee
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVI 196 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~ 196 (232)
...|+.+|++.+.+++.++.+. ||++++++||.|+
T Consensus 568 -------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~ 605 (681)
T PRK08324 568 -------------FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVV 605 (681)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence 2459999999999999988764 7999999999994
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=159.06 Aligned_cols=165 Identities=16% Similarity=0.132 Sum_probs=123.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh---cCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---DGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d~v 83 (232)
|+++||||+||||++++++|+++| ..|.+..|+.... . ...+++++++|+++.++++++. .++|++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l 71 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL 71 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------c--ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999985 5566666654321 1 1346889999999999877754 468999
Q ss_pred EEccccccc-----------CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 84 FHTASPVIF-----------LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 84 i~~Ag~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
|||||.... .+.+.++..+++|+.++..+++.+.+.+ +.++++++||..+......
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~---------- 141 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNR---------- 141 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCC----------
Confidence 999996431 1224567889999999999999998865 2368999988643211100
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~ 201 (232)
.+. ...|+.+|.+.+.+.+.++.+ .++++++|+||++.|++..
T Consensus 142 ----~~~-----~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~ 189 (235)
T PRK09009 142 ----LGG-----WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK 189 (235)
T ss_pred ----CCC-----cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc
Confidence 000 134888999988888888865 4899999999999999854
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-22 Score=170.19 Aligned_cols=163 Identities=19% Similarity=0.196 Sum_probs=124.7
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchh-hhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE-HLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+.++++|+||||+|+||++++++|+++|++|++++|+.++.... ...+......+++++++|++|.+++.++++
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 345678999999999999999999999999999999987543210 111111112468899999999999999988
Q ss_pred CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 79 GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
++|+|||+++.... ...+.+++|+.++.++++++.+. +.++||++||.....+
T Consensus 136 ~~D~Vi~~aa~~~~----~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p---------------------- 188 (390)
T PLN02657 136 PVDVVVSCLASRTG----GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKP---------------------- 188 (390)
T ss_pred CCcEEEECCccCCC----CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCc----------------------
Confidence 58999999874321 12345678999999999999887 7889999999843211
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
...|..+|...|+.+.. ...+++++++||+.++++
T Consensus 189 ---~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~ 223 (390)
T PLN02657 189 ---LLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKS 223 (390)
T ss_pred ---chHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcc
Confidence 12277899998887653 247999999999998864
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-23 Score=155.69 Aligned_cols=151 Identities=22% Similarity=0.247 Sum_probs=122.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCc-chhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSP-KTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
|+++||||+++||++++++|+++| ++|++++|+++.. ..+...++.....++.++++|+++.++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 689999999999999999999995 5788888982111 113334455456889999999999999998876 4
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
+|++|||||... +.+.+.+++.+++|+.+++.+.+++.+. +.++||++||..+..+.+.
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~--------------- 144 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAGVRGSPG--------------- 144 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGGTSSSTT---------------
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhhccCCCC---------------
Confidence 599999999543 2345778899999999999999999994 6789999999988866543
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE 182 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~ 182 (232)
...|+.+|++.+.+++.+++|
T Consensus 145 -------~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 -------MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp -------BHHHHHHHHHHHHHHHHHHHH
T ss_pred -------ChhHHHHHHHHHHHHHHHHHh
Confidence 255999999999999998876
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-22 Score=159.08 Aligned_cols=165 Identities=18% Similarity=0.160 Sum_probs=127.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDGVF 84 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi 84 (232)
+|++|||||+|+||+++++.|+++ ++|++++|++++.. +..+. ...++++++|++|.+++.++++ ++|+||
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD-ELAAE----LPGATPFPVDLTDPEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH-HHHHH----hccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 378999999999999999999999 99999999864321 11111 1357899999999999999887 589999
Q ss_pred Eccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 85 HTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 85 ~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
|+||.... .+.+.+.+.+++|+.++.++++.+.+.+ ..+++|++||..+..+...
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~------------------ 138 (227)
T PRK08219 77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG------------------ 138 (227)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC------------------
Confidence 99986422 2334567789999999888888776642 3479999999866543221
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHh-cC-CcEEEEccCceeCCCC
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKE-NG-IDLVAIHPGTVIGPFF 200 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~-~~-i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+.+.++.+ .+ +++++++||.+.+|..
T Consensus 139 ----~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 179 (227)
T PRK08219 139 ----WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ 179 (227)
T ss_pred ----CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh
Confidence 244999999999998887765 35 9999999999988753
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=167.18 Aligned_cols=185 Identities=16% Similarity=0.097 Sum_probs=134.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++||||+||||++++++|+++|++|++++|++++.. +.......++..+++|++|.+++.+.++++|++|
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~----~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLI 250 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT----LEINGEDLPVKTLHWQVGQEAALAELLEKVDILI 250 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEE
Confidence 367899999999999999999999999999999999864321 1111112346788999999999999999999999
Q ss_pred Eccccc--ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCc-------cEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 85 HTASPV--IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI-------KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 85 ~~Ag~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
||||.. .+.+.+++++.+++|+.++.++++++.+.+.. +.+|++|+. ...+ ..
T Consensus 251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa-~~~~-~~---------------- 312 (406)
T PRK07424 251 INHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA-EVNP-AF---------------- 312 (406)
T ss_pred ECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc-cccC-CC----------------
Confidence 999853 23445677899999999999999999886411 235555543 3211 00
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC---CCcchHHHHHHHHcC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLING 217 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~---~~~~~~~~~~~~~~~ 217 (232)
...|++||++...+......+.++.+..++||.+.|++... ..+..++.+.+.+..
T Consensus 313 ------~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~~~~~~spe~vA~~il~~i~~ 371 (406)
T PRK07424 313 ------SPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLNPIGVMSADWVAKQILKLAKR 371 (406)
T ss_pred ------chHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCCcCCCCCHHHHHHHHHHHHHC
Confidence 13499999999888654434567888888999998876432 123445555555543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=164.63 Aligned_cols=181 Identities=24% Similarity=0.361 Sum_probs=128.2
Q ss_pred EEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcch-hhhh----hhc--CC--C-CceEEEEcCCCCc------c
Q 026852 10 VVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKT-EHLR----ELD--GA--T-ERLHLFKANLLEE------G 71 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~-~~~~----~~~--~~--~-~~~~~~~~D~~~~------~ 71 (232)
+||||||+|+||++++++|+++| ++|+++.|+.+.... +.+. ... .. . .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999998 679999998753211 1111 110 00 1 4789999999864 4
Q ss_pred hHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCC
Q 026852 72 SFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 72 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
.+..+.+++|+|||+|+.... ..+.....++|+.++.++++++.+. +.++++++||...+...... ...++.
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~--~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~-----~~~~~~ 152 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW--VYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLS-----TVTEDD 152 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc--CCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCC-----Cccccc
Confidence 566777889999999986532 2345677889999999999999886 66789999999554322110 011111
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
...+. .......|+.||..+|.+++.+... |++++++|||.++|+..
T Consensus 153 ~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~ 199 (367)
T TIGR01746 153 AIVTP-PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSY 199 (367)
T ss_pred ccccc-ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCC
Confidence 11110 0111245999999999998776554 99999999999999843
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=160.06 Aligned_cols=164 Identities=23% Similarity=0.269 Sum_probs=127.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--------CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------GC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~~ 80 (232)
|+++||||+|+||+++++.|+++|++|++++|++++.. .+.. ..++.+++|++|.+++..+++ .+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~-----~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA-----RMNS--LGFTGILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH-----HHHh--CCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999875432 1111 236789999999988776653 45
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|.+||+||... +.+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+..+...
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------- 142 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG------------- 142 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC-------------
Confidence 89999998532 23455677899999999999877766642 4579999999865543221
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|...+.+.+.++.+ .++++++++||.+.|++.+
T Consensus 143 ---------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 185 (256)
T PRK08017 143 ---------RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTD 185 (256)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhh
Confidence 245999999999988776543 5899999999999887653
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-22 Score=152.66 Aligned_cols=169 Identities=19% Similarity=0.192 Sum_probs=136.9
Q ss_pred CCcEEEEECC-CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 7 EEKVVCVTGA-SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 7 ~~~~ilItGa-~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
..|+|+|||+ .||||.+++++|.+.||.|+++.|+.+...+ +.. ..++..++.|+++++++.....
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~-----L~~-~~gl~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQ-----LAI-QFGLKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhh-----HHH-hhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence 3478888876 5899999999999999999999999875432 221 2347889999999999887754
Q ss_pred -CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhh--CCccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKV--HSIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
+.|.++||||. .-+.+.+..++.|++|+.|..+.++++... ..++.||+++|..++-+.+.
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf----------- 148 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF----------- 148 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch-----------
Confidence 35999999983 445667788999999999999999987643 24689999999977765543
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.+.|.+||++.-.+.+.+.-| .|++|+.+-||.|.|.-++..
T Consensus 149 -----------~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~ 193 (289)
T KOG1209|consen 149 -----------GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKR 193 (289)
T ss_pred -----------hhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence 366999999999999887666 499999999999999877653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=171.51 Aligned_cols=171 Identities=18% Similarity=0.161 Sum_probs=133.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++++++||||+||||+++++.|+++|++|++++|.... +.+.++... .+..++++|++|.+++.++++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~---~~l~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG---EALAAVANR-VGGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH---HHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999885432 112222111 123578999999999888765
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... ..+.+.++..+++|+.+++++++++.+.+ ..++||++||..+..+...
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~---------- 352 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG---------- 352 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------
Confidence 5799999999542 24556788999999999999999998741 3379999999877654332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|...+.+.+.++.+ +|+++++++||.+.|++..
T Consensus 353 ------------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~ 395 (450)
T PRK08261 353 ------------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA 395 (450)
T ss_pred ------------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh
Confidence 134999999888888887765 5899999999999997653
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-21 Score=162.53 Aligned_cols=150 Identities=17% Similarity=0.188 Sum_probs=118.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+|+||||+|+||++++++|+++|++|++++|++++.. .+. ..+++++++|++|++++.++++++|+|||+++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-----~l~--~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-----FLK--EWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-----hHh--hcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 37999999999999999999999999999999864321 111 13578999999999999999999999999976
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.. ..++....++|+.++.++++++.+. +++|+|++||.+.. ..+ ...|..+
T Consensus 74 ~~----~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~-~~~-----------------------~~~~~~~ 124 (317)
T CHL00194 74 SR----PSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAE-QYP-----------------------YIPLMKL 124 (317)
T ss_pred CC----CCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccc-ccC-----------------------CChHHHH
Confidence 32 2234467788999999999999887 78999999996321 000 0227788
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
|...|++++ +.+++++++||+.++..
T Consensus 125 K~~~e~~l~----~~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 125 KSDIEQKLK----KSGIPYTIFRLAGFFQG 150 (317)
T ss_pred HHHHHHHHH----HcCCCeEEEeecHHhhh
Confidence 888887663 57999999999987653
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-21 Score=158.96 Aligned_cols=187 Identities=25% Similarity=0.317 Sum_probs=135.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcch-hhhhh-hc-------CCCCceEEEEcCCC------Ccch
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKT-EHLRE-LD-------GATERLHLFKANLL------EEGS 72 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~-~~~~~-~~-------~~~~~~~~~~~D~~------~~~~ 72 (232)
+++|+||||||+|.+++.+|+.. ..+|++..|..+.... ..++. +. ....+++.+.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 47999999999999999999987 5699999998763221 12211 11 22578999999997 4446
Q ss_pred HHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 73 FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 73 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+..+.+.+|.|||||+..... .+..+....|+.||..+++.+... +.|.+.|+||++.. ........+..+++. .
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v--~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~-~~~~~~~~~~~~~~~-~ 155 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVG-ETEYYSNFTVDFDEI-S 155 (382)
T ss_pred HHHHhhhcceEEecchhhccc--CcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeec-cccccCCCccccccc-c
Confidence 788888999999999865532 334566788999999999999886 56789999999543 222211112222211 1
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
+........+++|+.||+.+|.+++....+ |+++.++|||+|.++...
T Consensus 156 ~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~t 203 (382)
T COG3320 156 PTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRT 203 (382)
T ss_pred ccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCcc
Confidence 122222344577999999999999887666 999999999999887653
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-21 Score=169.08 Aligned_cols=191 Identities=17% Similarity=0.189 Sum_probs=134.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCC---eEEEEEcCCCCcch-hhhh-hhc------------C------CCCce
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNSPKT-EHLR-ELD------------G------ATERL 60 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~---~V~~~~r~~~~~~~-~~~~-~~~------------~------~~~~~ 60 (232)
..+++|+|||||||||+|.+++++|++.+. +|+++.|..+.... +.++ ++. . ...++
T Consensus 115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki 194 (605)
T PLN02503 115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL 194 (605)
T ss_pred hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence 457899999999999999999999998753 67899997654321 2221 110 0 13578
Q ss_pred EEEEcCCCCc------chHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccccee
Q 026852 61 HLFKANLLEE------GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAM 134 (232)
Q Consensus 61 ~~~~~D~~~~------~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~ 134 (232)
+++.+|++++ +..+.+.+++|+|||+|+.... .++++..+++|+.|+.++++++.+....+++|++||. .+
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f--~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa-yV 271 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF--DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA-YV 271 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc--ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc-ee
Confidence 9999999987 3566667789999999986542 3567889999999999999999886456789999998 44
Q ss_pred ccCCCCCCCccccccCC--------------------------------C----------------CChhhccccchhHH
Q 026852 135 LLNETPMTPDVVIDETW--------------------------------F----------------SNPVLCKENKEWYS 166 (232)
Q Consensus 135 ~~~~~~~~~~~~~~e~~--------------------------------~----------------~~~~~~~~~~~~y~ 166 (232)
++.......+..++... . ..+.......+.|.
T Consensus 272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt 351 (605)
T PLN02503 272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351 (605)
T ss_pred ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence 45443222222222000 0 00111122246799
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
.||+++|.++.... .+++++++||+.|.+..
T Consensus 352 ~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~ 382 (605)
T PLN02503 352 FTKAMGEMVINSMR--GDIPVVIIRPSVIESTW 382 (605)
T ss_pred HHHHHHHHHHHHhc--CCCCEEEEcCCEecccc
Confidence 99999999997543 48999999999995543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=171.88 Aligned_cols=173 Identities=25% Similarity=0.254 Sum_probs=125.8
Q ss_pred cEEEEECCCChhHHHHHHHHH--HCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCc------chHHHhhc
Q 026852 9 KVVCVTGASGFVASWLVKLLL--QRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEE------GSFDSAVD 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------~~~~~~~~ 78 (232)
|+||||||+|+||++++++|+ +.|++|++++|+.... .+..+.. ...+++++++|++|+ +.+..+ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~---~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS---RLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH---HHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 379999999999999999999 4799999999965421 1111111 125689999999985 345555 8
Q ss_pred CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 79 GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
++|+|||+||.... ........++|+.++.++++++.+. +.+++|++||...+ +... ...+|+....+
T Consensus 77 ~~D~Vih~Aa~~~~--~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~-g~~~-----~~~~e~~~~~~--- 144 (657)
T PRK07201 77 DIDHVVHLAAIYDL--TADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVA-GDYE-----GVFREDDFDEG--- 144 (657)
T ss_pred CCCEEEECceeecC--CCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccc-cCcc-----Cccccccchhh---
Confidence 99999999986432 2334667899999999999999886 67899999998554 3221 11222222111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
......|+.||..+|.++.. ..+++++++||++|+||..
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~ 183 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSR 183 (657)
T ss_pred cCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCC
Confidence 11124599999999998853 4689999999999999864
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-21 Score=144.97 Aligned_cols=164 Identities=21% Similarity=0.263 Sum_probs=127.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhh--hhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
++++||||+|+||.+++++|+++|+ .|+++.|++....... ++++.....++.++++|+++.+++.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999996 6888888765433211 23343345678899999999998887765
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
.+|.|||+||... ..+.++++..+++|+.++.++++++.+. +.+++|++||..+.++...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~~~~~~~-------------- 145 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAGVLGNPG-------------- 145 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHHhcCCCC--------------
Confidence 3599999998532 2345677889999999999999998765 5689999999877655322
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCcee
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI 196 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~ 196 (232)
...|+.+|.+.+.+++.+ ...+++++++.||.+.
T Consensus 146 --------~~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 146 --------QANYAAANAFLDALAAHR-RARGLPATSINWGAWA 179 (180)
T ss_pred --------chhhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence 244999999999998554 4579999999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=155.21 Aligned_cols=172 Identities=23% Similarity=0.224 Sum_probs=139.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhh--hcCCCCceEEEEcCCCCcchHHHhhcC-------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE--LDGATERLHLFKANLLEEGSFDSAVDG------- 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 79 (232)
++|+|||+++|||.+++.++..+|++|.++.|+.++... +... +......+.++.+|++|++++...+++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~-a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLE-AKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHH-HHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 589999999999999999999999999999999877653 2222 222223477999999999999998874
Q ss_pred CCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhCC----ccEEEEecccceeccCCCCCCCccccccC
Q 026852 80 CDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS----IKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 80 ~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
+|.+|||||. +.+.+.+..+..+++|.+|+.+++++..+.|. .++|+.+||..+..+..+
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G----------- 181 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG----------- 181 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc-----------
Confidence 3999999984 34456677899999999999999999888752 348999999988776554
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.+.|+.+|.+...+...+.+| +|++|+..-|+.+.||+....
T Consensus 182 -----------ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E 226 (331)
T KOG1210|consen 182 -----------YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE 226 (331)
T ss_pred -----------ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc
Confidence 144888888888888777776 599999999999999986543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-20 Score=150.32 Aligned_cols=171 Identities=26% Similarity=0.324 Sum_probs=120.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhh-cCCCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAV-DGCDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~-~~~d~ 82 (232)
+.++|+|+||||+|+||++++++|++.|++|+++.|++++.. .......+++++++|++| .+.+.+.+ +++|+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~ 88 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK-----TSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDA 88 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH-----HhcccCCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence 456789999999999999999999999999999999875321 111112468899999998 46677777 68999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc-
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN- 161 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~- 161 (232)
|||++|..... .....+++|..++.++++++.+. +.++||++||.+. ++.... . ...+.|...+
T Consensus 89 vi~~~g~~~~~---~~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v-~g~~~~----~------~~~~~~~~~~~ 153 (251)
T PLN00141 89 VICATGFRRSF---DPFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILV-NGAAMG----Q------ILNPAYIFLNL 153 (251)
T ss_pred EEECCCCCcCC---CCCCceeeehHHHHHHHHHHHHc-CCCEEEEEccccc-cCCCcc----c------ccCcchhHHHH
Confidence 99998853211 12234578999999999999876 7789999999954 332210 0 0111121111
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
...+..+|...++++ ++.+++++++|||+++++.
T Consensus 154 ~~~~~~~k~~~e~~l----~~~gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 154 FGLTLVAKLQAEKYI----RKSGINYTIVRPGGLTNDP 187 (251)
T ss_pred HHHHHHHHHHHHHHH----HhcCCcEEEEECCCccCCC
Confidence 122445566666554 3569999999999998765
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=157.00 Aligned_cols=162 Identities=23% Similarity=0.246 Sum_probs=125.8
Q ss_pred CCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--------CCCEEE
Q 026852 15 GAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------GCDGVF 84 (232)
Q Consensus 15 Ga~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~~d~vi 84 (232)
|++ +|||++++++|+++|++|++++|+.++.. +.++++..... ...+++|++++++++++++ ++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLA-DALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHH-HHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 666 99999999999999999999999987532 22333322111 2359999999999888854 579999
Q ss_pred Eccccccc---------CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 85 HTASPVIF---------LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 85 ~~Ag~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
||+|.... .+.+.+++.+++|+.++..+++++.+.+ ..++||++||.....+.+.
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~--------------- 143 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPG--------------- 143 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTT---------------
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCcc---------------
Confidence 99984321 3346789999999999999999998864 3479999999976544332
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCceeCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+++.++.+ +|||||+|+||.+.|+..
T Consensus 144 -------~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~ 186 (241)
T PF13561_consen 144 -------YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMT 186 (241)
T ss_dssp -------THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHH
T ss_pred -------chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccch
Confidence 135888888888888777765 589999999999999874
|
... |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-22 Score=145.51 Aligned_cols=188 Identities=20% Similarity=0.209 Sum_probs=146.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+.++-+.+|||+.+|+|++.++.|+.+|..|++.+-..++.. +..+++ ++++.|.+.|++.+.++..++.
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~-~vakel---g~~~vf~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA-DVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch-HHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence 357789999999999999999999999999999998777654 334444 5689999999999999988875
Q ss_pred -CCCEEEEcccccc-----------cCCCCchhhhhHHHHHHHHHHHHHHHhhCCc---------cEEEEecccceeccC
Q 026852 79 -GCDGVFHTASPVI-----------FLSDNPQADIVDPAVMGTLNVLRSCAKVHSI---------KRVVLTSSIGAMLLN 137 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~iv~vSS~~~~~~~ 137 (232)
+.|..+||||... ....+++..++++|++||+|+++.....|+. +-||+..|.+.+-+.
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq 161 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ 161 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence 4699999998421 1335677899999999999999987665422 468899998777554
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCCcchHHHHHHH
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNL 214 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~ 214 (232)
-+ . ..|++||.+.-.+..-++++ .|||++.+.||.+.||...+.++....++.+.
T Consensus 162 ~g--------------q--------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ 219 (260)
T KOG1199|consen 162 TG--------------Q--------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQL 219 (260)
T ss_pred cc--------------h--------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHh
Confidence 33 2 34777777666665555555 49999999999999999988877766666665
Q ss_pred HcCC
Q 026852 215 INGN 218 (232)
Q Consensus 215 ~~~~ 218 (232)
+...
T Consensus 220 ipfp 223 (260)
T KOG1199|consen 220 IPFP 223 (260)
T ss_pred CCCc
Confidence 5443
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=166.07 Aligned_cols=157 Identities=24% Similarity=0.252 Sum_probs=122.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+|+||||+|+||++++++|+++|++|++++|+.... . ..++.++++|++|.+++.++++++|+|||+|+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----~------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa 70 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----W------PSSADFIAADIRDATAVESAMTGADVVAHCAW 70 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----c------ccCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence 4799999999999999999999999999999975321 1 12578899999999999999999999999997
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.... .+++|+.++.++++++.+. +.+++|++||..
T Consensus 71 ~~~~--------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~------------------------------------ 105 (854)
T PRK05865 71 VRGR--------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH------------------------------------ 105 (854)
T ss_pred cccc--------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH------------------------------------
Confidence 5321 4688999999999999887 778999999861
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCC--CCccceeeeec
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIY--SAAIQDRIMIY 231 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 231 (232)
|..+|.++ .+++++++++||+++|||.. ..++.+.+....+ +.+.+.++|+|
T Consensus 106 K~aaE~ll----~~~gl~~vILRp~~VYGP~~-------~~~i~~ll~~~v~~~G~~~~~~dfIh 159 (854)
T PRK05865 106 QPRVEQML----ADCGLEWVAVRCALIFGRNV-------DNWVQRLFALPVLPAGYADRVVQVVH 159 (854)
T ss_pred HHHHHHHH----HHcCCCEEEEEeceEeCCCh-------HHHHHHHhcCceeccCCCCceEeeee
Confidence 55556555 35799999999999999962 1223333322333 44566778987
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=153.00 Aligned_cols=151 Identities=24% Similarity=0.260 Sum_probs=112.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||+|++|.++.++|.+.|++|+.+.|+ +.|++|.+++.+.++ ++|+|||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~pd~Vin~ 58 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAFKPDVVINC 58 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence 589999999999999999999999999998666 378999999999887 47999999
Q ss_pred ccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||... +..+.+++..+++|+.++.++++++... + .++||+||...+-+.. ..+.+|++.+.|. +.|
T Consensus 59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~-----~~~y~E~d~~~P~------~~Y 125 (286)
T PF04321_consen 59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDK-----GGPYTEDDPPNPL------NVY 125 (286)
T ss_dssp -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SST-----SSSB-TTS----S------SHH
T ss_pred ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCc-----ccccccCCCCCCC------CHH
Confidence 98643 2345668899999999999999999886 3 5999999996554432 2345566555543 669
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
|.+|..+|+.++. ..-+..++|+++++|+
T Consensus 126 G~~K~~~E~~v~~----~~~~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 126 GRSKLEGEQAVRA----ACPNALILRTSWVYGP 154 (286)
T ss_dssp HHHHHHHHHHHHH----H-SSEEEEEE-SEESS
T ss_pred HHHHHHHHHHHHH----hcCCEEEEecceeccc
Confidence 9999999998854 2338999999999999
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=148.22 Aligned_cols=192 Identities=21% Similarity=0.208 Sum_probs=121.7
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag~~ 90 (232)
||||||+|+||++++++|++.|++|++++|++.+... .. ...+ .|+.. +.+...+.++|+|||+||..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~-------~~~~--~~~~~-~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN--TK-------WEGY--KPWAP-LAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc--cc-------ceee--ecccc-cchhhhcCCCCEEEECCCCC
Confidence 6899999999999999999999999999998865321 10 0111 12222 45566778899999999853
Q ss_pred cc---CCCCchhhhhHHHHHHHHHHHHHHHhhCCcc--EEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 91 IF---LSDNPQADIVDPAVMGTLNVLRSCAKVHSIK--RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 91 ~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
.. .........+++|+.++.++++++... +.+ ++|+.||. ..++... ..+++|+..+.+. ..|
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~-~~yg~~~----~~~~~E~~~~~~~------~~~ 136 (292)
T TIGR01777 69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAV-GYYGTSE----DRVFTEEDSPAGD------DFL 136 (292)
T ss_pred cccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeE-EEeCCCC----CCCcCcccCCCCC------ChH
Confidence 21 222345678889999999999999887 543 44444554 4455322 2334444322111 124
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHH--HHHHcCCCCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVI--LNLINGNIYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (232)
+..+...+..... +++.+++++++||+.++||... .....+ .....+..++++.+.|+|+|
T Consensus 137 ~~~~~~~e~~~~~-~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~i~ 199 (292)
T TIGR01777 137 AELCRDWEEAAQA-AEDLGTRVVLLRTGIVLGPKGG----ALAKMLPPFRLGLGGPLGSGRQWFSWIH 199 (292)
T ss_pred HHHHHHHHHHhhh-chhcCCceEEEeeeeEECCCcc----hhHHHHHHHhcCcccccCCCCcccccEe
Confidence 4444444444332 2346899999999999999632 112111 11122235778899999987
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-20 Score=182.61 Aligned_cols=172 Identities=18% Similarity=0.160 Sum_probs=139.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCc----------------------------------------
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSP---------------------------------------- 45 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~---------------------------------------- 45 (232)
+++++|||||+||||.+++++|+++ |++|++++|++...
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5789999999999999999999998 69999999983100
Q ss_pred ---c---hhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------CCCEEEEccccc-----ccCCCCchhhhhHHHHHH
Q 026852 46 ---K---TEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMG 108 (232)
Q Consensus 46 ---~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~ 108 (232)
. ...++.+...+.++.++.+|++|.+++.++++ ++|+||||||.. .+.+.+.+++++++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 01122222335678899999999999988876 479999999953 235678899999999999
Q ss_pred HHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-CCcE
Q 026852 109 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GIDL 187 (232)
Q Consensus 109 ~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-~i~~ 187 (232)
++++++++.+. ..++||++||..++++... ...|+++|.+.+.+...++.+. ++++
T Consensus 2156 ~~~Ll~al~~~-~~~~IV~~SSvag~~G~~g----------------------qs~YaaAkaaL~~la~~la~~~~~irV 2212 (2582)
T TIGR02813 2156 LLSLLAALNAE-NIKLLALFSSAAGFYGNTG----------------------QSDYAMSNDILNKAALQLKALNPSAKV 2212 (2582)
T ss_pred HHHHHHHHHHh-CCCeEEEEechhhcCCCCC----------------------cHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 99999998876 4578999999988876544 2449999999999998888875 7999
Q ss_pred EEEccCceeCCCCC
Q 026852 188 VAIHPGTVIGPFFQ 201 (232)
Q Consensus 188 ~~v~pg~v~g~~~~ 201 (232)
++|.||.+.|++..
T Consensus 2213 ~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2213 MSFNWGPWDGGMVN 2226 (2582)
T ss_pred EEEECCeecCCccc
Confidence 99999999998754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-19 Score=141.02 Aligned_cols=191 Identities=19% Similarity=0.207 Sum_probs=130.5
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-CCCEEEEcccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVFHTASP 89 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~Ag~ 89 (232)
|+||||||+||++++..|.+.|++|++++|++.+... +++ ..+...+.+....+ ++|+|||+||.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~-----------~~~---~~v~~~~~~~~~~~~~~DavINLAG~ 66 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ-----------NLH---PNVTLWEGLADALTLGIDAVINLAGE 66 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh-----------hcC---ccccccchhhhcccCCCCEEEECCCC
Confidence 6899999999999999999999999999999975432 111 11123344445555 69999999994
Q ss_pred -ccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 90 -VIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 90 -~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
..+ ++.+..+...+..+..|..+.++..+.....+....+|..++|+... +..++|+..+...+
T Consensus 67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~----~~~~tE~~~~g~~F--------- 133 (297)
T COG1090 67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG----DRVVTEESPPGDDF--------- 133 (297)
T ss_pred ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC----ceeeecCCCCCCCh---------
Confidence 332 66778899999999999999999886533333444444458888775 66677775443332
Q ss_pred HHHHHHHHHHHH--HHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCCCCccceeeeec
Q 026852 167 LAKTLAEEAAWK--FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231 (232)
Q Consensus 167 ~sK~~~~~~~~~--~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (232)
.-.++..|-.. -++..|+||+.+|.|.|.+|......... +.. +.--|..+|+|.|+..|||
T Consensus 134 -la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~-~~f-k~glGG~~GsGrQ~~SWIh 197 (297)
T COG1090 134 -LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKML-PLF-KLGLGGKLGSGRQWFSWIH 197 (297)
T ss_pred -HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhc-chh-hhccCCccCCCCceeeeee
Confidence 22222222211 12235999999999999998754432222 122 3334559999999999998
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=143.73 Aligned_cols=151 Identities=22% Similarity=0.191 Sum_probs=126.0
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~A 87 (232)
+|||||++|.+|.++++.|. .+++|+.++|.. +|++|.+.+.++++ ++|+|||+|
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~PDvVIn~A 58 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRETRPDVVINAA 58 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence 49999999999999999998 678999887764 89999999999998 469999999
Q ss_pred ccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 88 SPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 88 g~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
+.. .+..+.+++..+.+|..++.++++++.+. ..++||+||...+-|.. ..+..|++.+.|- +.||
T Consensus 59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiSTDyVFDG~~-----~~~Y~E~D~~~P~------nvYG 125 (281)
T COG1091 59 AYTAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHISTDYVFDGEK-----GGPYKETDTPNPL------NVYG 125 (281)
T ss_pred cccccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEeecceEecCCC-----CCCCCCCCCCCCh------hhhh
Confidence 864 44567778999999999999999999887 36899999996654443 2345666666654 6799
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
.||.++|..++ ..+-+..++|.+|+++...
T Consensus 126 ~sKl~GE~~v~----~~~~~~~I~Rtswv~g~~g 155 (281)
T COG1091 126 RSKLAGEEAVR----AAGPRHLILRTSWVYGEYG 155 (281)
T ss_pred HHHHHHHHHHH----HhCCCEEEEEeeeeecCCC
Confidence 99999999885 3467899999999999875
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-19 Score=146.45 Aligned_cols=169 Identities=15% Similarity=0.205 Sum_probs=109.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
.|+||||||+||||++++++|+++|++|+...+ |+.+.+.+...++ ++|+|||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-------------------------~~~~~~~v~~~l~~~~~D~ViH 63 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-------------------------RLENRASLEADIDAVKPTHVFN 63 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-------------------------ccCCHHHHHHHHHhcCCCEEEE
Confidence 368999999999999999999999999875322 2233344444444 6899999
Q ss_pred ccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCC--CccccccCCCCChhhcc
Q 026852 86 TASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMT--PDVVIDETWFSNPVLCK 159 (232)
Q Consensus 86 ~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~ 159 (232)
+||.... ....++.+.+++|+.++.++++++.+. +.++ +++||. +.++.....+ ....++|++.+.+
T Consensus 64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~-v~~sS~-~vy~~~~~~p~~~~~~~~Ee~~p~~---- 136 (298)
T PLN02778 64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVL-TNYATG-CIFEYDDAHPLGSGIGFKEEDTPNF---- 136 (298)
T ss_pred CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCE-EEEecc-eEeCCCCCCCcccCCCCCcCCCCCC----
Confidence 9997532 133567889999999999999999887 6654 555555 3333221111 1112444443322
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~ 218 (232)
..+.|+.||.++|.++..+.. ...+|++..+++... ....++.+++.++
T Consensus 137 -~~s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~----~~~~fi~~~~~~~ 185 (298)
T PLN02778 137 -TGSFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS----NPRNFITKITRYE 185 (298)
T ss_pred -CCCchHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc----cHHHHHHHHHcCC
Confidence 125699999999999977653 445666555554311 1133555566554
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.4e-20 Score=140.79 Aligned_cols=194 Identities=24% Similarity=0.266 Sum_probs=149.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC---eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 83 (232)
++|||||++|.+|+++.+.+...|. +.+... + -.+|+++.++.+++|+ ++..|
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-s---------------------kd~DLt~~a~t~~lF~~ekPthV 59 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-S---------------------KDADLTNLADTRALFESEKPTHV 59 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-c---------------------ccccccchHHHHHHHhccCCcee
Confidence 6899999999999999999998875 222111 1 1288999999999987 56899
Q ss_pred EEccccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 84 FHTASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 84 i~~Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
||.|+..+. .......+.+..|+....|+++.+... +.+++|+..|. +++|... ..+++|+..-+.....++
T Consensus 60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclSt-CIfPdkt----~yPIdEtmvh~gpphpsN 133 (315)
T KOG1431|consen 60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLST-CIFPDKT----SYPIDETMVHNGPPHPSN 133 (315)
T ss_pred eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcce-eecCCCC----CCCCCHHHhccCCCCCCc
Confidence 999986543 234556788999999999999999998 88999998887 6777665 345666554332222222
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc---chHHHHHHHHcCC--------CCCCccceeeee
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGN--------IYSAAIQDRIMI 230 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~ 230 (232)
.+|+..|++.+-..+.|+.++|...+.+-|.+++||..+-.++ .+|.++.+....+ ++|.|.+.|.||
T Consensus 134 -~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFi 212 (315)
T KOG1431|consen 134 -FGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFI 212 (315)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHh
Confidence 5699999999988899999999999999999999998654433 4566776644322 899999999999
Q ss_pred c
Q 026852 231 Y 231 (232)
Q Consensus 231 ~ 231 (232)
|
T Consensus 213 y 213 (315)
T KOG1431|consen 213 Y 213 (315)
T ss_pred h
Confidence 8
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.1e-20 Score=147.34 Aligned_cols=172 Identities=13% Similarity=0.114 Sum_probs=136.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch----HHHhhcC--CCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS----FDSAVDG--CDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~~--~d~ 82 (232)
+-++||||+.|||++.+++|+++|++|++++|++++.+.-..+.....+-.++++..|.++.++ +.+.+.+ +.+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 6789999999999999999999999999999999887642222222334678899999987665 4444444 469
Q ss_pred EEEccccccc-------CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 83 VFHTASPVIF-------LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 83 vi~~Ag~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|||+|...+ .+....++.+.+|+.++..+.+..+|.| +.+-||++||.++..+.+.
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~------------- 196 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPL------------- 196 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChh-------------
Confidence 9999996542 2333557889999999999999999975 4578999999988765433
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
-..|++||+..+.+..++..|+ ||.|-++-|..|-|++...
T Consensus 197 ---------~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~ 240 (312)
T KOG1014|consen 197 ---------LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY 240 (312)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence 2559999999999999988884 8999999999999987643
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-19 Score=135.94 Aligned_cols=152 Identities=32% Similarity=0.473 Sum_probs=117.2
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag~~ 90 (232)
|+|+||||++|+.++++|+++|++|+++.|++++.. . ..+++++++|+.|++++.++++++|+||+++|+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~-----~----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE-----D----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH-----H----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc-----c----ccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence 799999999999999999999999999999986432 1 4679999999999999999999999999999753
Q ss_pred ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHH
Q 026852 91 IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKT 170 (232)
Q Consensus 91 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~ 170 (232)
.. +...+.++++++.+. +.+++|++||.+.. ..... . ......+. ...|...|.
T Consensus 72 ~~------------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~-~~~~~----~---~~~~~~~~-----~~~~~~~~~ 125 (183)
T PF13460_consen 72 PK------------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVY-RDPPG----L---FSDEDKPI-----FPEYARDKR 125 (183)
T ss_dssp TT------------HHHHHHHHHHHHHHT-TSSEEEEEEETTGT-TTCTS----E---EEGGTCGG-----GHHHHHHHH
T ss_pred cc------------ccccccccccccccc-ccccceeeeccccC-CCCCc----c---cccccccc-----hhhhHHHHH
Confidence 22 167778888988887 78999999999544 22110 0 00000111 133777777
Q ss_pred HHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 171 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 171 ~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
..++.+ ++.+++++++||++++++...
T Consensus 126 ~~e~~~----~~~~~~~~ivrp~~~~~~~~~ 152 (183)
T PF13460_consen 126 EAEEAL----RESGLNWTIVRPGWIYGNPSR 152 (183)
T ss_dssp HHHHHH----HHSTSEEEEEEESEEEBTTSS
T ss_pred HHHHHH----HhcCCCEEEEECcEeEeCCCc
Confidence 777665 356999999999999998743
|
... |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-19 Score=151.39 Aligned_cols=185 Identities=19% Similarity=0.186 Sum_probs=126.9
Q ss_pred CCcEEEEE----CCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch------hhhhhhcCCCCceEEEEcCCCCcchHHHh
Q 026852 7 EEKVVCVT----GASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 7 ~~~~ilIt----Ga~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (232)
..++|||| ||+|+||++++++|+++|++|++++|++..... ....++. ...++++++|+.|.+.+. .
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~~~-~ 127 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPADVKSKV-A 127 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHHHHhhh-c
Confidence 34689999 999999999999999999999999998753211 0011111 134789999998743332 2
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChh
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV 156 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~ 156 (232)
..++|+|||+++. +..++.++++++.+. +.+++|++||.+ .|+... ..+..|+....|
T Consensus 128 ~~~~d~Vi~~~~~---------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~-vyg~~~----~~p~~E~~~~~p- 185 (378)
T PLN00016 128 GAGFDVVYDNNGK---------------DLDEVEPVADWAKSP-GLKQFLFCSSAG-VYKKSD----EPPHVEGDAVKP- 185 (378)
T ss_pred cCCccEEEeCCCC---------------CHHHHHHHHHHHHHc-CCCEEEEEccHh-hcCCCC----CCCCCCCCcCCC-
Confidence 2478999999752 134677889998876 789999999984 444322 112233322211
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+. +|..+|.+++ +.+++++++||++++||..... ....++.++..++ +.+++.+.++|+|
T Consensus 186 --------~~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~ 248 (378)
T PLN00016 186 --------KA-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGH 248 (378)
T ss_pred --------cc-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceec
Confidence 12 7888887653 5799999999999999975432 2233445566665 4578899999987
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-19 Score=143.49 Aligned_cols=162 Identities=18% Similarity=0.134 Sum_probs=115.9
Q ss_pred HHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----CCCEEEEcccccccCCCCchh
Q 026852 24 LVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVFHTASPVIFLSDNPQA 99 (232)
Q Consensus 24 ~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~Ag~~~~~~~~~~~ 99 (232)
++++|+++|++|++++|++++.. ..+++++|++|.+++.++++ ++|+||||||... ..+++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~---~~~~~ 65 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG---TAPVE 65 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC---CCCHH
Confidence 47899999999999999875421 13468899999999999887 4799999998642 35678
Q ss_pred hhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCC--hh----hccccchhHHHHHHHH
Q 026852 100 DIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN--PV----LCKENKEWYSLAKTLA 172 (232)
Q Consensus 100 ~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~--~~----~~~~~~~~y~~sK~~~ 172 (232)
..+++|+.++.++++.+.+.+ ..++||++||..++..... ......+.+..... .. .+......|+.||.+.
T Consensus 66 ~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~ 144 (241)
T PRK12428 66 LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR-LELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL 144 (241)
T ss_pred HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc-hHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence 999999999999999999864 3479999999976531110 00000000000000 00 0111135699999999
Q ss_pred HHHHHHHH-Hh---cCCcEEEEccCceeCCCCC
Q 026852 173 EEAAWKFA-KE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 173 ~~~~~~~~-~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+.+.+.++ .+ +||++++|+||++.|++..
T Consensus 145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~ 177 (241)
T PRK12428 145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILG 177 (241)
T ss_pred HHHHHHHHHHhhhccCeEEEEeecCCccCcccc
Confidence 99998888 43 5899999999999999754
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=168.80 Aligned_cols=218 Identities=24% Similarity=0.289 Sum_probs=142.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC----CeEEEEEcCCCCcch-hhhhh-hc-------CCCCceEEEEcCCCCc----
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG----YTVKATVRDPNSPKT-EHLRE-LD-------GATERLHLFKANLLEE---- 70 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~-~~~~~-~~-------~~~~~~~~~~~D~~~~---- 70 (232)
.++|+||||+|++|++++++|++++ ++|+++.|+...... +.+.. .. ....+++++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999987 789999997653321 11111 00 1124789999999743
Q ss_pred --chHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCC-C-----
Q 026852 71 --GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPM-T----- 142 (232)
Q Consensus 71 --~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~-~----- 142 (232)
+.+..+.+++|+|||+|+.... ..........|+.|+.++++++.+. +.++++++||...+....... .
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~--~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~ 1127 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHW--VYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQ 1127 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecC--ccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhh
Confidence 4566677889999999987542 2233445568999999999999876 678999999985542110000 0
Q ss_pred -CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcC----
Q 026852 143 -PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING---- 217 (232)
Q Consensus 143 -~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~---- 217 (232)
......|+....+ ........|+.||+++|.++..+.+ .|++++++|||.|+|+...... ....++...+.+
T Consensus 1128 ~~~~~~~e~~~~~~-~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~-~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443 1128 AGGAGIPESDDLMG-SSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGAT-NTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred ccCCCCCccccccc-ccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCC-CchhHHHHHHHHHHHh
Confidence 0001112211111 1111234599999999999987655 5999999999999999755432 222333333322
Q ss_pred CCCCCccceeeeec
Q 026852 218 NIYSAAIQDRIMIY 231 (232)
Q Consensus 218 ~~~~~~~~~~~~~~ 231 (232)
..+.++.+.++|++
T Consensus 1205 ~~~p~~~~~~~~~~ 1218 (1389)
T TIGR03443 1205 GLIPNINNTVNMVP 1218 (1389)
T ss_pred CCcCCCCCcccccc
Confidence 25555666677764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.4e-19 Score=135.82 Aligned_cols=172 Identities=16% Similarity=0.075 Sum_probs=125.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
.++++|+||+++|||..++..+.+++-+.....++....+.+.+.- .. .+.......|+++..-+.++++ +
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v-~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~gk 82 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKV-AY-GDDFVHVVGDITEEQLLGALREAPRKKGGK 82 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEE-Ee-cCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence 3478999999999999999999988765544444433222111110 11 2344455667766655555554 3
Q ss_pred CCEEEEccccccc--------CCCCchhhhhHHHHHHHHHHHHHHHhhC-C---ccEEEEecccceeccCCCCCCCcccc
Q 026852 80 CDGVFHTASPVIF--------LSDNPQADIVDPAVMGTLNVLRSCAKVH-S---IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 80 ~d~vi~~Ag~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~---~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
-|+||||||...+ .+...|.+.++.|+....-+...+.+.. + .+-+||+||.+.+.+...
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~-------- 154 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS-------- 154 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH--------
Confidence 4999999995332 3456889999999999998888777752 1 367999999988876543
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~ 202 (232)
.+.|+.+|++.+++.+.++.|. ++++.+++||.++|+++..
T Consensus 155 --------------wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ 197 (253)
T KOG1204|consen 155 --------------WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVC 197 (253)
T ss_pred --------------HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHH
Confidence 2559999999999999988874 9999999999999999754
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=128.06 Aligned_cols=163 Identities=22% Similarity=0.287 Sum_probs=122.0
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCC-CCc-chhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-------
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP-NSP-KTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------- 79 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~-~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 79 (232)
++|||||.|+||..+++.|++++. +|+++.|+. ... ..+.++++.....+++++++|++|++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999974 899999993 222 2245566666677899999999999999999864
Q ss_pred CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 80 CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 80 ~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
++.|||+||.. ...+.+.++.++...+.|+.++.+++.+. ....+|..||..+..+..+
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~~~G~~g--------------- 145 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISSLLGGPG--------------- 145 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHHHTT-TT---------------
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhHhccCcc---------------
Confidence 48999999854 23455677888999999999999998775 6789999999988877665
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCcee
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI 196 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~ 196 (232)
...|++.....+.+++... ..+.++.+|.-|.+.
T Consensus 146 -------q~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 146 -------QSAYAAANAFLDALARQRR-SRGLPAVSINWGAWD 179 (181)
T ss_dssp -------BHHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EBS
T ss_pred -------hHhHHHHHHHHHHHHHHHH-hCCCCEEEEEccccC
Confidence 2459999999999887654 358899888876553
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.4e-17 Score=127.70 Aligned_cols=213 Identities=21% Similarity=0.173 Sum_probs=152.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchh--hhhhhcCC-CCceEEEEcCCCCcchHHHhhc--CCCE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE--HLRELDGA-TERLHLFKANLLEEGSFDSAVD--GCDG 82 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~d~ 82 (232)
+|++||||-+|.-|+.+++.|++.||.|.++.|..+..... .+.+.... ..+++++.+|++|...+.++++ ++|-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 47999999999999999999999999999999875433322 22222222 3458999999999999999988 4699
Q ss_pred EEEccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 83 VFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 83 vi~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
|+|+|+.. ...+.+.|+.+.+++-.|+.+++++...... .-||...||+ ..+|... ..+-+|..+..
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~----~~pq~E~TPFy------ 150 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQ----EIPQKETTPFY------ 150 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH-HhhcCcc----cCccccCCCCC------
Confidence 99999974 3467788899999999999999999887632 3467777777 6666544 33334443332
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
+.++|+++|..+-.+...|.+.+|+-.+.=.-.+-.+|.-...+ ..+...+.++..|. -.|.....|||=|
T Consensus 151 PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~ 227 (345)
T COG1089 151 PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGH 227 (345)
T ss_pred CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccc
Confidence 24779999999999999998888876654444444445432222 12333444444444 7778888888854
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=143.04 Aligned_cols=138 Identities=20% Similarity=0.222 Sum_probs=105.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+||||++++++|+++|++|++++|++... ...+++++++|+++.. +.++++++|+|||+|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa 69 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAP 69 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence 3799999999999999999999999999999875321 1235789999999984 7888889999999997
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.... ...++|+.++.++++++.+. +. ++|++||.. +.+. .|.
T Consensus 70 ~~~~-------~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~---G~~~------------------------~~~-- 111 (699)
T PRK12320 70 VDTS-------APGGVGITGLAHVANAAARA-GA-RLLFVSQAA---GRPE------------------------LYR-- 111 (699)
T ss_pred cCcc-------chhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC---CCCc------------------------ccc--
Confidence 5321 12358999999999999887 54 799999872 2110 022
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
.+|.++ ..++++++++||+++|||...
T Consensus 112 --~aE~ll----~~~~~p~~ILR~~nVYGp~~~ 138 (699)
T PRK12320 112 --QAETLV----STGWAPSLVIRIAPPVGRQLD 138 (699)
T ss_pred --HHHHHH----HhcCCCEEEEeCceecCCCCc
Confidence 234443 245799999999999999654
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-16 Score=134.74 Aligned_cols=194 Identities=24% Similarity=0.290 Sum_probs=137.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCC---CeEEEEEcCCCCcch-hhhhh---------hc----CCCCceEEEEcCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKT-EHLRE---------LD----GATERLHLFKANL 67 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~~-~~~~~---------~~----~~~~~~~~~~~D~ 67 (232)
.+++|+||||||+||+|.-+++.|++.- -+++++-|..++... +.+.. ++ ....++..+.+|+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 4789999999999999999999999873 267777787665432 22211 11 2236788999999
Q ss_pred CCcc------hHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCC
Q 026852 68 LEEG------SFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 68 ~~~~------~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++++ +++.+.+++|+|||+|+... .++..+..+.+|..|+.++++.+.+....+-+|++||.-+. ......
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvr--Fde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i 165 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVR--FDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHI 165 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeec--cchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccc
Confidence 7543 45567889999999998543 35666788999999999999999998788999999998655 222211
Q ss_pred CCccccccCC--------------------CCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 142 TPDVVIDETW--------------------FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 142 ~~~~~~~e~~--------------------~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
. +.++.+.. ...+.+....++.|.++|+++|+++... ..+++++++||+.|......
T Consensus 166 ~-E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--~~~lPivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 166 E-EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--AENLPLVIIRPSIITSTYKE 242 (467)
T ss_pred c-ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--ccCCCeEEEcCCceeccccC
Confidence 1 11111110 0112222233566999999999999764 35899999999999887765
Q ss_pred CCC
Q 026852 202 PIL 204 (232)
Q Consensus 202 ~~~ 204 (232)
+..
T Consensus 243 P~p 245 (467)
T KOG1221|consen 243 PFP 245 (467)
T ss_pred CCC
Confidence 554
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.1e-16 Score=142.96 Aligned_cols=153 Identities=16% Similarity=0.230 Sum_probs=105.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
..|+||||||+|+||+++++.|.++|++|... ..|++|.+.+...++ ++|+||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------~~~l~d~~~v~~~i~~~~pd~Vi 433 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------KGRLEDRSSLLADIRNVKPTHVF 433 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence 44689999999999999999999999887311 134667777777776 689999
Q ss_pred Eccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCC--CccccccCCCCChhhc
Q 026852 85 HTASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMT--PDVVIDETWFSNPVLC 158 (232)
Q Consensus 85 ~~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~--~~~~~~e~~~~~~~~~ 158 (232)
|+|+.... ..+.++.+.+++|+.++.++++++.+. +. ++|++||. .+++.....+ ...++.|++.+.+.
T Consensus 434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~-~~v~~Ss~-~v~~~~~~~~~~~~~p~~E~~~~~~~-- 508 (668)
T PLN02260 434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GL-LMMNFATG-CIFEYDAKHPEGSGIGFKEEDKPNFT-- 508 (668)
T ss_pred ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CC-eEEEEccc-ceecCCcccccccCCCCCcCCCCCCC--
Confidence 99986532 234577889999999999999999987 65 46677776 3333211000 01234454433221
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 197 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g 197 (232)
.+.|+.||.++|.++..+.+ ..++|+.++++
T Consensus 509 ---~~~Yg~sK~~~E~~~~~~~~-----~~~~r~~~~~~ 539 (668)
T PLN02260 509 ---GSFYSKTKAMVEELLREYDN-----VCTLRVRMPIS 539 (668)
T ss_pred ---CChhhHHHHHHHHHHHhhhh-----heEEEEEEecc
Confidence 25699999999999976643 34445444553
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.4e-15 Score=123.27 Aligned_cols=134 Identities=18% Similarity=0.258 Sum_probs=98.4
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh------cC-CCE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV------DG-CDG 82 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~-~d~ 82 (232)
+|+||||||++|++++++|+++|++|.+++|++++.. ..+++.+.+|+.|++++..++ ++ +|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence 4899999999999999999999999999999986432 124566789999999999998 56 999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
++|+++... . ......++++++.+. +++|||++||.....+. .
T Consensus 71 v~~~~~~~~----~--------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~-~----------------------- 113 (285)
T TIGR03649 71 VYLVAPPIP----D--------LAPPMIKFIDFARSK-GVRRFVLLSASIIEKGG-P----------------------- 113 (285)
T ss_pred EEEeCCCCC----C--------hhHHHHHHHHHHHHc-CCCEEEEeeccccCCCC-c-----------------------
Confidence 999976321 1 112345778888877 88999999987432110 0
Q ss_pred hhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCC
Q 026852 163 EWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~ 199 (232)
.+...++++ ++ .+++++++||++++.+.
T Consensus 114 -----~~~~~~~~l----~~~~gi~~tilRp~~f~~~~ 142 (285)
T TIGR03649 114 -----AMGQVHAHL----DSLGGVEYTVLRPTWFMENF 142 (285)
T ss_pred -----hHHHHHHHH----HhccCCCEEEEeccHHhhhh
Confidence 111122222 34 49999999999887654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3e-15 Score=114.15 Aligned_cols=132 Identities=16% Similarity=0.152 Sum_probs=90.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|+++||||++|||+++++.|++.|++|++++|+.+... +..+++........++++|+++.+++.++++
T Consensus 10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ-ATVEEITNLGGEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 345578899999999999999999999999999999999865332 2233333334557788999999999888653
Q ss_pred ----CCCEEEEccccccc---CCCCchhhhhHHHHHHHHHHHHHHHhh----------CCccEEEEeccccee
Q 026852 79 ----GCDGVFHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKV----------HSIKRVVLTSSIGAM 134 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~iv~vSS~~~~ 134 (232)
++|++|||||.... ......+..-..|+.++...++.+.+. .+.+|+..+||.+..
T Consensus 89 ~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 89 NAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred HHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 57999999985321 111111111244555555555444333 144788888887544
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=118.48 Aligned_cols=181 Identities=21% Similarity=0.189 Sum_probs=130.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-----eEEEEEcCCCCcchhhhhhhc----CCCCceEEEEcCCCCcchHHHhhc-
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-----TVKATVRDPNSPKTEHLRELD----GATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-----~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
|++||||+++|+|.++++.|++... ++++.+|+.++.+ +.+..++ ....+++++++|+++..++.++.+
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae-~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAE-AVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHH-HHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 7999999999999999999998853 5778899988765 3333332 224678999999999999988865
Q ss_pred ------CCCEEEEccccc--------------------------------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC
Q 026852 79 ------GCDGVFHTASPV--------------------------------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120 (232)
Q Consensus 79 ------~~d~vi~~Ag~~--------------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 120 (232)
+.|.|+.|||.+ +-.+.++..+++++|+.|...+++.+.+..
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 459999999710 013456778899999999999998887752
Q ss_pred ---CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCc
Q 026852 121 ---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGT 194 (232)
Q Consensus 121 ---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~ 194 (232)
....+|++||..+.. ..... +. ......+ .+|.-||.+.+-+-....+. .|+...+++||.
T Consensus 163 ~~~~~~~lvwtSS~~a~k-k~lsl---eD--------~q~~kg~-~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~ 229 (341)
T KOG1478|consen 163 CHSDNPQLVWTSSRMARK-KNLSL---ED--------FQHSKGK-EPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGI 229 (341)
T ss_pred hcCCCCeEEEEeeccccc-ccCCH---HH--------HhhhcCC-CCcchhHHHHHHHHHHHhccccccchhhhcccCce
Confidence 234899999986542 11110 00 0111122 34999999999876555444 378899999999
Q ss_pred eeCCCCCCC
Q 026852 195 VIGPFFQPI 203 (232)
Q Consensus 195 v~g~~~~~~ 203 (232)
..+.+....
T Consensus 230 ~tt~~~~~~ 238 (341)
T KOG1478|consen 230 FTTNSFSEY 238 (341)
T ss_pred eecchhhhh
Confidence 887765443
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=110.82 Aligned_cols=172 Identities=17% Similarity=0.181 Sum_probs=132.8
Q ss_pred CCCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 4 GEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
..|+||++||+|- ++.|+..+++.|.++|+++..+..++. .+ +..+++....+....++||+++.++++++|+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~-l~-krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER-LE-KRVEELAEELGSDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHH-HH-HHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence 3589999999995 678999999999999999999988873 22 4455555544556688999999999988876
Q ss_pred ----CCCEEEEcccc---------cccCCCCchhhhhHHHHHHHHHHHHHHHhhCCc-cEEEEecccceeccCCCCCCCc
Q 026852 79 ----GCDGVFHTASP---------VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ----~~d~vi~~Ag~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|.++|+-|. +.+.+.+.+...+++......-+++++.+.|+. +.+|-++=.++...
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~-------- 151 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV-------- 151 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee--------
Confidence 56999999873 233566777888888888889999999998744 45554433322221
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
.|. .++++..|+..|..++.++.+ .|||||.|.-|.|.|=.
T Consensus 152 ---------vPn-----YNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLA 195 (259)
T COG0623 152 ---------VPN-----YNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLA 195 (259)
T ss_pred ---------cCC-----CchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHH
Confidence 122 367999999999999998887 48999999999998743
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=103.76 Aligned_cols=163 Identities=20% Similarity=0.276 Sum_probs=117.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+|-|.||||-+|+.++++++++|++|+++.||+++... -..+..++.|+.|++++.+.+.+.|+||..-+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~ 71 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---------RQGVTILQKDIFDLTSLASDLAGHDAVISAFG 71 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---------cccceeecccccChhhhHhhhcCCceEEEecc
Confidence 579999999999999999999999999999999976432 14577899999999999999999999998865
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
... +.+. .. .......+++.+... ++.|++.++..++.+-.+. ....|...+|.+. |.-.
T Consensus 72 ~~~--~~~~-~~----~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g----~rLvD~p~fP~ey--------~~~A 131 (211)
T COG2910 72 AGA--SDND-EL----HSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEG----TRLVDTPDFPAEY--------KPEA 131 (211)
T ss_pred CCC--CChh-HH----HHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCC----ceeecCCCCchhH--------HHHH
Confidence 431 1111 11 222344455555444 7889999999988775544 2334444433322 5556
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
+..++.+ +.+..+..+.|+.+.|....-|+.+
T Consensus 132 ~~~ae~L-~~Lr~~~~l~WTfvSPaa~f~PGer 163 (211)
T COG2910 132 LAQAEFL-DSLRAEKSLDWTFVSPAAFFEPGER 163 (211)
T ss_pred HHHHHHH-HHHhhccCcceEEeCcHHhcCCccc
Confidence 6666654 5555667799999999999888543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.7e-13 Score=109.96 Aligned_cols=148 Identities=29% Similarity=0.383 Sum_probs=101.5
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag~~ 90 (232)
|+|+||+|.+|+.+++.|++.+++|.++.|++++ +....+.. ..++.+++|..|.+++.++++++|+||++.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~---~~~~~l~~--~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS---DRAQQLQA--LGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH---HHHHHHHH--TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch---hhhhhhhc--ccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 7999999999999999999999999999999843 22233322 245678999999999999999999999886543
Q ss_pred ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHH
Q 026852 91 IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKT 170 (232)
Q Consensus 91 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~ 170 (232)
. ...+....++++++.+. ++++||+ ||......... ...|. ...-..|.
T Consensus 76 ~-----------~~~~~~~~~li~Aa~~a-gVk~~v~-ss~~~~~~~~~------------~~~p~------~~~~~~k~ 124 (233)
T PF05368_consen 76 H-----------PSELEQQKNLIDAAKAA-GVKHFVP-SSFGADYDESS------------GSEPE------IPHFDQKA 124 (233)
T ss_dssp C-----------CCHHHHHHHHHHHHHHH-T-SEEEE-SEESSGTTTTT------------TSTTH------HHHHHHHH
T ss_pred h-----------hhhhhhhhhHHHhhhcc-ccceEEE-EEecccccccc------------ccccc------chhhhhhh
Confidence 2 22445567899999998 7999986 44433321110 00111 11233566
Q ss_pred HHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 171 LAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 171 ~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
..++.+ ++.++++++++||+++..
T Consensus 125 ~ie~~l----~~~~i~~t~i~~g~f~e~ 148 (233)
T PF05368_consen 125 EIEEYL----RESGIPYTIIRPGFFMEN 148 (233)
T ss_dssp HHHHHH----HHCTSEBEEEEE-EEHHH
T ss_pred hhhhhh----hhccccceeccccchhhh
Confidence 666555 456999999999988643
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=107.56 Aligned_cols=163 Identities=20% Similarity=0.215 Sum_probs=127.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++.|-++-|.||+||+|+.++.+|.+.|-+|++=.|..+... ...+...+-+++-+++.|+.|++++.++++..++|
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~--r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVV 134 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP--RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVV 134 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch--hheeecccccceeeeccCCCCHHHHHHHHHhCcEE
Confidence 3467778899999999999999999999999999999765321 12233455678999999999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
||+.|.-.+.. -.+..++|+.+...+++.|... ++.|+|++|+.++-.-. .+
T Consensus 135 INLIGrd~eTk---nf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~s------------------------~S 186 (391)
T KOG2865|consen 135 INLIGRDYETK---NFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVKS------------------------PS 186 (391)
T ss_pred EEeeccccccC---CcccccccchHHHHHHHHHHhh-ChhheeehhhccccccC------------------------hH
Confidence 99988432211 1245678999999999999887 89999999998532110 02
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
-|=.+|.++|..++.. =-..+++||..++|...
T Consensus 187 r~LrsK~~gE~aVrda----fPeAtIirPa~iyG~eD 219 (391)
T KOG2865|consen 187 RMLRSKAAGEEAVRDA----FPEATIIRPADIYGTED 219 (391)
T ss_pred HHHHhhhhhHHHHHhh----CCcceeechhhhcccch
Confidence 2678899999887532 23578999999999763
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.6e-12 Score=105.19 Aligned_cols=176 Identities=15% Similarity=0.034 Sum_probs=108.7
Q ss_pred CCcEEEEECCCChhHHH--HHHHHHHCCCeEEEEEcCCCCcc----------hhhhh-hhcCCCCceEEEEcCCCCcchH
Q 026852 7 EEKVVCVTGASGFVASW--LVKLLLQRGYTVKATVRDPNSPK----------TEHLR-ELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~--~~~~l~~~g~~V~~~~r~~~~~~----------~~~~~-~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
.+|++||||+++|||.+ +++.| ++|++|+++++..+... .+... .....+..+..++||+++.+++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 35899999999999999 89999 99999988885432111 01122 2222234567899999999998
Q ss_pred HHhhc-------CCCEEEEcccccccCC---------------CCchh----------------hhh------HHHHHHH
Q 026852 74 DSAVD-------GCDGVFHTASPVIFLS---------------DNPQA----------------DIV------DPAVMGT 109 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~~~~~---------------~~~~~----------------~~~------~~n~~~~ 109 (232)
.++++ ++|++|||+|...-.. ...-. ... -+.++|.
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg 198 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG 198 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence 88765 5799999997321000 00000 000 1122222
Q ss_pred HH---H--HHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-
Q 026852 110 LN---V--LRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 182 (232)
Q Consensus 110 ~~---l--~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~- 182 (232)
.. = .....+.+ ...++|-.|..+.-...+ ..+.+..|..|+..|..++.++.+
T Consensus 199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p--------------------~Y~~g~mG~AKa~LE~~~r~La~~L 258 (398)
T PRK13656 199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHP--------------------IYWDGTIGKAKKDLDRTALALNEKL 258 (398)
T ss_pred chHHHHHHHHHhcccccCCcEEEEEecCCcceeec--------------------ccCCchHHHHHHHHHHHHHHHHHHh
Confidence 00 0 11122222 235666666654322111 122356899999999999888887
Q ss_pred --cCCcEEEEccCceeCCCCCCC
Q 026852 183 --NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 183 --~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.|+|++++.+|.+.|......
T Consensus 259 ~~~giran~i~~g~~~T~Ass~I 281 (398)
T PRK13656 259 AAKGGDAYVSVLKAVVTQASSAI 281 (398)
T ss_pred hhcCCEEEEEecCcccchhhhcC
Confidence 489999999999999765443
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-12 Score=97.21 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=137.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC-CC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--cCCCE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR-GY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--DGCDG 82 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~ 82 (232)
+..+|||||+-|-+|..++..|..+ |- .|++.+.-.... ... .+-.++..|+.|...+++.+ +++|.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--~V~-------~~GPyIy~DILD~K~L~eIVVn~RIdW 113 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--NVT-------DVGPYIYLDILDQKSLEEIVVNKRIDW 113 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--hhc-------ccCCchhhhhhccccHHHhhcccccce
Confidence 3468999999999999999988876 54 466555432211 111 12246779999999998876 36899
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc-cc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK-EN 161 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~ 161 (232)
+||..+......+.+--....+|+.|..|+++.+.++ + -++...|+++++.+.+.. -+.|+... .+
T Consensus 114 L~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-k-L~iFVPSTIGAFGPtSPR-----------NPTPdltIQRP 180 (366)
T KOG2774|consen 114 LVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-K-LKVFVPSTIGAFGPTSPR-----------NPTPDLTIQRP 180 (366)
T ss_pred eeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-C-eeEeecccccccCCCCCC-----------CCCCCeeeecC
Confidence 9999886554445555566789999999999999887 3 356667888777554331 12333322 23
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEc-cCcee-CCCCCCCCcchHHHHHHHH-cCC--CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIH-PGTVI-GPFFQPILNFGAEVILNLI-NGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~-pg~v~-g~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 231 (232)
..+||.||.-+|-+.+.+..+.|+.+-++| ||.+- +|......+.....+...+ .|+ ++-.......++|
T Consensus 181 RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy 255 (366)
T KOG2774|consen 181 RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMY 255 (366)
T ss_pred ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceee
Confidence 466999999999999999888999999998 55442 2222333344444444444 444 6666666655555
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-10 Score=95.12 Aligned_cols=148 Identities=26% Similarity=0.313 Sum_probs=109.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
++|+||||||++|++++++|+++|++|.+..|+++.... .. ..+.+...|+.++..+..+++++|.+++..+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~-----~~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~ 72 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA-----LA---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISG 72 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHh-----hc---CCcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence 469999999999999999999999999999999965422 22 5788999999999999999999999998876
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
... ... ...........+..+.+. .+.++++.+|........ ...|..+
T Consensus 73 ~~~-~~~----~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~~~------------------------~~~~~~~ 121 (275)
T COG0702 73 LLD-GSD----AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADAAS------------------------PSALARA 121 (275)
T ss_pred ccc-ccc----chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCCCC------------------------ccHHHHH
Confidence 432 111 223344455555555544 256788888888543211 1338899
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
|...|..+. ..|+..+.++|..++...
T Consensus 122 ~~~~e~~l~----~sg~~~t~lr~~~~~~~~ 148 (275)
T COG0702 122 KAAVEAALR----SSGIPYTTLRRAAFYLGA 148 (275)
T ss_pred HHHHHHHHH----hcCCCeEEEecCeeeecc
Confidence 999998874 579998989866665443
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-10 Score=96.48 Aligned_cols=179 Identities=13% Similarity=0.031 Sum_probs=118.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+++++|.|+|++|.||+.++..|+..+ .+++++|++.... +.++.... .. .....+.+|.+++.+.++++|+|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g--~a~Dl~~~-~~--~~~v~~~td~~~~~~~l~gaDvV 80 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPG--VAADLSHI-DT--PAKVTGYADGELWEKALRGADLV 80 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcc--cccchhhc-Cc--CceEEEecCCCchHHHhCCCCEE
Confidence 567899999999999999999998665 5899999933221 22221111 11 22334566666667889999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|++||... .+.+.+.+.+..|+.++.++++++.++ +.+++|+++|-........ ......+...+ .+..
T Consensus 81 VitaG~~~-~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~--~~~~~~~~sg~-------p~~~ 149 (321)
T PTZ00325 81 LICAGVPR-KPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPI--AAETLKKAGVY-------DPRK 149 (321)
T ss_pred EECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHH--HHhhhhhccCC-------Chhh
Confidence 99999632 223557788999999999999999998 7889999988744321000 00000011111 1124
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
+||.+-.=.-++...+++..++....|+ ++|.|++.+
T Consensus 150 viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 150 LFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred eeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 4666622233556667777899988888 889998876
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=86.24 Aligned_cols=161 Identities=17% Similarity=0.140 Sum_probs=113.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|+++..+|.||+|-.|..+++++++++ -+|+++.|.+-... .....+.....|.+..++....+.+.|+.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~--------at~k~v~q~~vDf~Kl~~~a~~~qg~dV~ 87 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP--------ATDKVVAQVEVDFSKLSQLATNEQGPDVL 87 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc--------cccceeeeEEechHHHHHHHhhhcCCceE
Confidence 577899999999999999999999997 38999998852111 11356777889999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
+++-|..-.. ...+..+.+.--=.+.+++++... +.++|+.+||.++.-.+ ..
T Consensus 88 FcaLgTTRgk--aGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sS------------------------rF 140 (238)
T KOG4039|consen 88 FCALGTTRGK--AGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSS------------------------RF 140 (238)
T ss_pred EEeecccccc--cccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCccc------------------------ce
Confidence 9988743211 112233333333344456666555 88999999999664211 13
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-cEEEEccCceeCCCCCCCCc
Q 026852 164 WYSLAKTLAEEAAWKFAKENGI-DLVAIHPGTVIGPFFQPILN 205 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i-~~~~v~pg~v~g~~~~~~~~ 205 (232)
.|..+|--.|+-+. +.++ +++++|||.+.+..+.+...
T Consensus 141 lY~k~KGEvE~~v~----eL~F~~~~i~RPG~ll~~R~esr~g 179 (238)
T KOG4039|consen 141 LYMKMKGEVERDVI----ELDFKHIIILRPGPLLGERTESRQG 179 (238)
T ss_pred eeeeccchhhhhhh----hccccEEEEecCcceeccccccccc
Confidence 36666766666553 3444 68899999999988776543
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-10 Score=91.07 Aligned_cols=210 Identities=17% Similarity=0.187 Sum_probs=134.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-----cCCCCceEEEEcCCCCcchHHHhhc--CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-----DGATERLHLFKANLLEEGSFDSAVD--GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~--~~ 80 (232)
.|++||||-+|-=|+.+++.|+..||+|.++.|..+.-....++-+ ...+.++.++.+|++|...+.++++ ++
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 3589999999999999999999999999999987765443333322 1224678899999999999999987 45
Q ss_pred CEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 81 DGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 81 d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
+-|.|+|+...- .+.+-++-+.++...|+++++++..... ..-|+--.||+ ..|+...+.+ -.|. .|.|
T Consensus 108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstS-ElyGkv~e~P----QsE~---TPFy 179 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTS-ELYGKVQEIP----QSET---TPFY 179 (376)
T ss_pred hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccH-hhcccccCCC----cccC---CCCC
Confidence 899999985322 3344456677889999999999876641 22466666666 6666544222 1222 2333
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc-c----hHHHHHHHHcCC----CCCCccceee
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN-F----GAEVILNLINGN----IYSAAIQDRI 228 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~-~----~~~~~~~~~~~~----~~~~~~~~~~ 228 (232)
++++|+++|..+-..+..|...+|+ ..|.|....--...+.+ + +.+.+.++-.+. ..|.....||
T Consensus 180 ---PRSPYa~aKmy~~WivvNyREAYnm---fAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD 253 (376)
T KOG1372|consen 180 ---PRSPYAAAKMYGYWIVVNYREAYNM---FACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD 253 (376)
T ss_pred ---CCChhHHhhhhheEEEEEhHHhhcc---eeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence 2467999998776655555555553 34455443221111111 1 223333333333 5666677777
Q ss_pred eec
Q 026852 229 MIY 231 (232)
Q Consensus 229 ~~~ 231 (232)
|=|
T Consensus 254 WGh 256 (376)
T KOG1372|consen 254 WGH 256 (376)
T ss_pred cch
Confidence 643
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=92.68 Aligned_cols=167 Identities=28% Similarity=0.330 Sum_probs=103.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-CcchHHHhhcCC----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGC---- 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~---- 80 (232)
.+.++|||+||+|++|+-+++.|+++|+.|.++.|+..+... ... ..........+..|.. ..+....+.+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~-~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAED-LLG-VFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhh-hhc-ccccccccceeeeccccccchhhhhhhhccccc
Confidence 456799999999999999999999999999999999865432 111 1111223333444443 333333444322
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
.+++-++|-..+ .++...-..+...|+.+++++|... +++|+|++||++.--.+.. . ... .
T Consensus 155 ~~v~~~~ggrp~--~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~----------~---~~~---~ 215 (411)
T KOG1203|consen 155 VIVIKGAGGRPE--EEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQP----------P---NIL---L 215 (411)
T ss_pred eeEEecccCCCC--cccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCC----------c---hhh---h
Confidence 355555542211 1112233356788999999999887 9999999999855422211 0 000 0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeC
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 197 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g 197 (232)
....+-..|..++.+. ++.|++..+||||....
T Consensus 216 ~~~~~~~~k~~~e~~~----~~Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 216 LNGLVLKAKLKAEKFL----QDSGLPYTIIRPGGLEQ 248 (411)
T ss_pred hhhhhhHHHHhHHHHH----HhcCCCcEEEecccccc
Confidence 0112334455555544 47899999999998754
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.4e-09 Score=89.49 Aligned_cols=173 Identities=15% Similarity=0.067 Sum_probs=116.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.++|.|||++|.+|..++..|+..+. +++++|+++... +.++ +....... ...++++.+++.+.++++|+|||
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g--~a~D-l~~~~~~~--~i~~~~~~~d~~~~l~~aDiVVi 92 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPG--VAAD-VSHINTPA--QVRGFLGDDQLGDALKGADLVII 92 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCe--eEch-hhhCCcCc--eEEEEeCCCCHHHHcCCCCEEEE
Confidence 36899999999999999999997764 799999987222 2222 11111111 22355556678889999999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceec--cCCCCCCCccccccCCCCChhhccccch
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAML--LNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
.||.... +...+.+.+..|......+.+.+.++ +..++|+++|--... +.-. ....+.+. ..+..
T Consensus 93 tAG~~~~-~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t----~~~~~~s~-------~p~~~ 159 (323)
T PLN00106 93 PAGVPRK-PGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAA----EVLKKAGV-------YDPKK 159 (323)
T ss_pred eCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHH----HHHHHcCC-------CCcce
Confidence 9996322 34567889999999999999999998 567777777753420 0000 00000010 01124
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
.||.++.-.+++...++++.|+....| -++|.|..
T Consensus 160 viG~~~LDs~Rl~~~lA~~lgv~~~~V-~~~ViGeH 194 (323)
T PLN00106 160 LFGVTTLDVVRANTFVAEKKGLDPADV-DVPVVGGH 194 (323)
T ss_pred EEEEecchHHHHHHHHHHHhCCChhhe-EEEEEEeC
Confidence 577777667788888888989888777 55677766
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.7e-10 Score=84.36 Aligned_cols=100 Identities=14% Similarity=0.175 Sum_probs=72.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC-------C
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC-------D 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------d 81 (232)
|+++||||+|++ .++++.|+++|++|++.+|+++... .....+. ...++.++++|++|.+++.++++++ |
T Consensus 1 m~vlVtGGtG~g-g~la~~L~~~G~~V~v~~R~~~~~~-~l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGML-KRVSLWLCEKGFHVSVIARREVKLE-NVKREST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHH-HHHHHHHHHCcCEEEEEECCHHHHH-HHHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 469999999655 5699999999999999999865321 1222222 2357889999999999999887643 4
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCcc----EEEEec
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK----RVVLTS 129 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~iv~vS 129 (232)
.+|+. ++..++.++..++.+. +++ +++++-
T Consensus 78 ~lv~~-----------------vh~~~~~~~~~~~~~~-gv~~~~~~~~h~~ 111 (177)
T PRK08309 78 LAVAW-----------------IHSSAKDALSVVCREL-DGSSETYRLFHVL 111 (177)
T ss_pred EEEEe-----------------ccccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence 55533 2445678888888887 667 899883
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-08 Score=84.98 Aligned_cols=176 Identities=13% Similarity=0.069 Sum_probs=105.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-------CeEEEEEcCCCC--cchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-------YTVKATVRDPNS--PKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
.+|+||||+|++|++++..|+..+ .+|+++++++.. .....++ +. ........|++...++.+.+++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D-l~---d~~~~~~~~~~~~~~~~~~l~~ 78 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME-LQ---DCAFPLLKSVVATTDPEEAFKD 78 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee-hh---hccccccCCceecCCHHHHhCC
Confidence 479999999999999999999854 589999997642 1111111 10 0000222356556777888999
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCcccccc-CCCCChhh
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDE-TWFSNPVL 157 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e-~~~~~~~~ 157 (232)
+|+|||+||.... ..+...+.++.|+.....+.+.+.++. ....++.+|...-...... .+. ..++.
T Consensus 79 aDiVI~tAG~~~~-~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-------~k~~~~~~~--- 147 (325)
T cd01336 79 VDVAILVGAMPRK-EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL-------LKYAPSIPK--- 147 (325)
T ss_pred CCEEEEeCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH-------HHHcCCCCH---
Confidence 9999999996432 234557889999999999988888873 3456666675422211000 000 00000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.. .-+.+..-.-++...++++.+++...|+-..|+|...+..
T Consensus 148 --~~--ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~s~ 189 (325)
T cd01336 148 --EN--FTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSSTQ 189 (325)
T ss_pred --HH--EEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCCCe
Confidence 00 0011112222444445566788888887777777765543
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=81.42 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=56.0
Q ss_pred CCCcEEEEECCC----------------ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC
Q 026852 6 GEEKVVCVTGAS----------------GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (232)
Q Consensus 6 ~~~~~ilItGa~----------------g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (232)
|+||+||||+|. |+||++++++|+++|++|+++++...... .. .. ....+..+..|...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~-~~---~~-~~~~~~~V~s~~d~ 75 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP-ND---IN-NQLELHPFEGIIDL 75 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC-cc---cC-CceeEEEEecHHHH
Confidence 468999999886 99999999999999999998876432111 00 00 01234455564433
Q ss_pred cchHHHhhc--CCCEEEEcccc
Q 026852 70 EGSFDSAVD--GCDGVFHTASP 89 (232)
Q Consensus 70 ~~~~~~~~~--~~d~vi~~Ag~ 89 (232)
.+.+.++++ ++|+|||+|+.
T Consensus 76 ~~~l~~~~~~~~~D~VIH~AAv 97 (229)
T PRK09620 76 QDKMKSIITHEKVDAVIMAAAG 97 (229)
T ss_pred HHHHHHHhcccCCCEEEECccc
Confidence 467778784 68999999986
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.8e-08 Score=80.59 Aligned_cols=73 Identities=14% Similarity=0.213 Sum_probs=49.9
Q ss_pred EEEEEC-CCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC--cchHHHhhcCCCEEEEc
Q 026852 10 VVCVTG-ASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 10 ~ilItG-a~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vi~~ 86 (232)
+=+||. +||+||++++++|+++|++|++++|+..... . ...++.+++++..+ .+.+.+.++++|+|||+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~------~--~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP------E--PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC------C--CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 335553 4567999999999999999999987643211 0 11345666654322 24566677789999999
Q ss_pred cccc
Q 026852 87 ASPV 90 (232)
Q Consensus 87 Ag~~ 90 (232)
||..
T Consensus 89 AAvs 92 (229)
T PRK06732 89 MAVS 92 (229)
T ss_pred CccC
Confidence 9964
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-08 Score=83.42 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=62.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCC---CcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPN---SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+++|+++|+|| ||+|++++..|++.|++ |++++|+.+ +. ++..+++......+....+|+.+.+++.+.++.+|
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a-~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERA-EQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHH-HHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 56789999999 79999999999999986 999999873 22 13333343323445667789988888888888999
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
+|||+-.
T Consensus 202 ilINaTp 208 (289)
T PRK12548 202 ILVNATL 208 (289)
T ss_pred EEEEeCC
Confidence 9998863
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.7e-08 Score=81.94 Aligned_cols=173 Identities=12% Similarity=0.035 Sum_probs=116.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCC--cchhhhhhhcCC---CCceEEEEcCCCCcchHHH
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNS--PKTEHLRELDGA---TERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~ 75 (232)
.++|.|+||+|.+|..++..|+..|. +++++|+++.. ...++++..... ..+++ ++ ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----IT--DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Ee--cCcHH
Confidence 36899999999999999999998874 69999986543 222222211110 01122 22 23357
Q ss_pred hhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 76 AVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 76 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
.++++|+||.+||... .+.+...+.++.|+.....+.+.+.++.. ...++.+|...-....-. .+...
T Consensus 75 ~~~daDivvitaG~~~-k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-------~k~sg--- 143 (322)
T cd01338 75 AFKDADWALLVGAKPR-GPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-------MKNAP--- 143 (322)
T ss_pred HhCCCCEEEEeCCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-------HHHcC---
Confidence 7789999999999532 23455678899999999999999988853 566777775422211000 00000
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
. ..+..+|+.++.-..++...+++..|++...++.-+|+|+..+
T Consensus 144 -~--~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 144 -D--IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred -C--CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 0 1123568889999999999999999999999998889998854
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.2e-08 Score=76.50 Aligned_cols=154 Identities=17% Similarity=0.102 Sum_probs=112.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcccc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASP 89 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag~ 89 (232)
..++.|++++.|+++++.....++.|..+.|+..+. .++.. ...+.++++|.....-++....++..++-++|-
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~---~l~sw---~~~vswh~gnsfssn~~k~~l~g~t~v~e~~gg 127 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ---TLSSW---PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG 127 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc---hhhCC---CcccchhhccccccCcchhhhcCCcccHHHhcC
Confidence 478999999999999999999999999999997642 22222 356788888888777777777788888877764
Q ss_pred cccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHH
Q 026852 90 VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK 169 (232)
Q Consensus 90 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK 169 (232)
+. ....+..+|=....+..+++.+. ++++++++|....-.++.- ...|--+|
T Consensus 128 fg-----n~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~~~~i----------------------~rGY~~gK 179 (283)
T KOG4288|consen 128 FG-----NIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGLPPLI----------------------PRGYIEGK 179 (283)
T ss_pred cc-----chHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCCCCcc----------------------chhhhccc
Confidence 32 22344455666666777888887 8999999998632111100 12377889
Q ss_pred HHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 170 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 170 ~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
+.+|.-+.. .++.|-+++|||++|+...
T Consensus 180 R~AE~Ell~---~~~~rgiilRPGFiyg~R~ 207 (283)
T KOG4288|consen 180 REAEAELLK---KFRFRGIILRPGFIYGTRN 207 (283)
T ss_pred hHHHHHHHH---hcCCCceeeccceeecccc
Confidence 988875543 5678999999999998743
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.3e-08 Score=77.14 Aligned_cols=81 Identities=21% Similarity=0.218 Sum_probs=62.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++++++|+||+|++|+.+++.|++.|++|++++|+.++.. +..+.+.. ........+|..+.+++.++++++|+||
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~-~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQ-KAADSLRA-RFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHh-hcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 467899999999999999999999999999999999875432 22222221 1123455678889999999999999999
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
++.
T Consensus 103 ~at 105 (194)
T cd01078 103 AAG 105 (194)
T ss_pred ECC
Confidence 865
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.7e-08 Score=83.06 Aligned_cols=76 Identities=21% Similarity=0.233 Sum_probs=64.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++|||.|| |+||+.++..|+++| .+|++.+|+.++..+ +.. ....+++.+++|+.|.+++.+++++.|+|||++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~--i~~--~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~ 76 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCAR--IAE--LIGGKVEALQVDAADVDALVALIKDFDLVINAA 76 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHH--HHh--hccccceeEEecccChHHHHHHHhcCCEEEEeC
Confidence 67999999 999999999999998 899999999865432 111 113489999999999999999999999999999
Q ss_pred cc
Q 026852 88 SP 89 (232)
Q Consensus 88 g~ 89 (232)
.+
T Consensus 77 p~ 78 (389)
T COG1748 77 PP 78 (389)
T ss_pred Cc
Confidence 63
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.5e-07 Score=79.03 Aligned_cols=175 Identities=14% Similarity=0.072 Sum_probs=102.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCC--CCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDP--NSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+|.||||+|.+|+.++..|+..|. +++++|+++ +...-..++.......... ...++ ....+.++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~--~~~i~--~~~~~~~~~a 77 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLK--GVVIT--TDPEEAFKDV 77 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccC--CcEEe--cChHHHhCCC
Confidence 689999999999999999998652 589999987 3322111111000000000 01122 3456888999
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|+|||.||... .+.+...+.++.|+.....+.+.+.++. ....++.+|-..-....-. .+.... ++
T Consensus 78 DiVVitAG~~~-~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-------~k~sg~----~p- 144 (323)
T cd00704 78 DVAILVGAFPR-KPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA-------LKNAPN----LP- 144 (323)
T ss_pred CEEEEeCCCCC-CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH-------HHHcCC----CC-
Confidence 99999999532 2345667889999999999999988883 5566777765422111000 000000 00
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
+....+.+..-..++-..+++..++....|+-.+|.|...+.
T Consensus 145 -~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s 186 (323)
T cd00704 145 -PKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSNT 186 (323)
T ss_pred -HHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccCc
Confidence 011223333333344455566667777777666777766543
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.6e-07 Score=74.46 Aligned_cols=175 Identities=13% Similarity=0.047 Sum_probs=101.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCC--cchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNS--PKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+|.|+||+|.+|.+++..|+..+. +++++|+++.. ......+ +..... .+. ..+.-.....+.++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~D-l~d~~~--~~~-~~~~~~~~~~~~~~~a 76 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVME-LMDCAF--PLL-DGVVPTHDPAVAFTDV 76 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEee-hhcccc--hhc-CceeccCChHHHhCCC
Confidence 489999999999999999998553 58999997653 1111111 110000 000 0111111345788899
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC-CCCChhhc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET-WFSNPVLC 158 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~-~~~~~~~~ 158 (232)
|+||++||.-.. ..+.+.+.++.|+.....+.+...++. ....++.+|...-....-. .+.. .++.-..
T Consensus 77 DiVVitAG~~~~-~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~-------~~~sg~~~~~vi- 147 (324)
T TIGR01758 77 DVAILVGAFPRK-EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL-------SNYAPSIPPKNF- 147 (324)
T ss_pred CEEEEcCCCCCC-CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH-------HHHcCCCCcceE-
Confidence 999999995322 234578889999999999999998873 4566777675422211000 0000 0000000
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
=..+..-.-++...++++.+++...|+-++|.|...+..
T Consensus 148 ------g~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~ 186 (324)
T TIGR01758 148 ------SALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSSTQ 186 (324)
T ss_pred ------EEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCCCc
Confidence 001111223444556667788888888778888765543
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.9e-08 Score=84.00 Aligned_cols=73 Identities=19% Similarity=0.103 Sum_probs=58.1
Q ss_pred CCCCcEEEEECC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC
Q 026852 5 EGEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68 (232)
Q Consensus 5 ~~~~~~ilItGa----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (232)
.+++|++||||| +|++|.+++++|+++|++|++++++.+. . . .. ....+|++
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~------~---~~--~~~~~dv~ 252 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P------T---PA--GVKRIDVE 252 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c------C---CC--CcEEEccC
Confidence 478899999999 7779999999999999999999887631 1 0 11 13457999
Q ss_pred CcchHHHhhc----CCCEEEEcccc
Q 026852 69 EEGSFDSAVD----GCDGVFHTASP 89 (232)
Q Consensus 69 ~~~~~~~~~~----~~d~vi~~Ag~ 89 (232)
+.+++.++++ ++|++||+||.
T Consensus 253 ~~~~~~~~v~~~~~~~DilI~~Aav 277 (399)
T PRK05579 253 SAQEMLDAVLAALPQADIFIMAAAV 277 (399)
T ss_pred CHHHHHHHHHHhcCCCCEEEEcccc
Confidence 9888777764 68999999985
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.6e-08 Score=78.10 Aligned_cols=92 Identities=11% Similarity=0.069 Sum_probs=57.9
Q ss_pred EEEEECC-CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 10 VVCVTGA-SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 10 ~ilItGa-~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
+=+||.. +||||++++++|+++|++|+++++... +... ....+|+++.+++.++++ ++|
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~------l~~~-------~~~~~Dv~d~~s~~~l~~~v~~~~g~iD 82 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA------LKPE-------PHPNLSIREIETTKDLLITLKELVQEHD 82 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh------cccc-------cCCcceeecHHHHHHHHHHHHHHcCCCC
Confidence 3355554 789999999999999999999876321 1000 023578888877776543 579
Q ss_pred EEEEcccccc--cCCCCchhhhhHHHHHHHHHHHH
Q 026852 82 GVFHTASPVI--FLSDNPQADIVDPAVMGTLNVLR 114 (232)
Q Consensus 82 ~vi~~Ag~~~--~~~~~~~~~~~~~n~~~~~~l~~ 114 (232)
++|||||... .......+++.+++..++..+.+
T Consensus 83 iLVnnAgv~d~~~~~~~s~e~~~~~~~~~~~~~~~ 117 (227)
T TIGR02114 83 ILIHSMAVSDYTPVYMTDLEQVQASDNLNEFLSKQ 117 (227)
T ss_pred EEEECCEeccccchhhCCHHHHhhhcchhhhhccc
Confidence 9999998532 11122233344445555555443
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=73.41 Aligned_cols=116 Identities=19% Similarity=0.126 Sum_probs=79.6
Q ss_pred cEEEEECCCChhHHHHHHHHHH-C--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQ-R--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
|+|+|.||+|++|++++..|.. . ++++++++|++.. ....++ +.. ......+.+ .+.+++.+.++++|+||.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alD-l~~-~~~~~~i~~--~~~~d~~~~l~~~DiVIi 75 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVD-LSH-IPTAVKIKG--FSGEDPTPALEGADVVLI 75 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehh-hhc-CCCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence 5899999999999999998865 2 4578888887542 111121 111 011112222 234566677789999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
++|.... +.+...+.+..|......+++.+.++ +.+++|.+.|-
T Consensus 76 taG~~~~-~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN 119 (312)
T PRK05086 76 SAGVARK-PGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN 119 (312)
T ss_pred cCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 9996432 23456788999999999999999998 66777777664
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.1e-07 Score=80.23 Aligned_cols=76 Identities=29% Similarity=0.523 Sum_probs=58.2
Q ss_pred EEEECCCChhHHHHHHHHHHCC-C-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRG-Y-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+|.|| |++|+.+++.|++.+ . +|++.+|+.++... ..+++ ...++.++++|+.|.+++.++++++|+|||++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~-~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAER-LAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHH-HHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHH-HHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCc
Confidence 789999 999999999999996 4 89999999864321 11111 357899999999999999999999999999998
Q ss_pred cc
Q 026852 89 PV 90 (232)
Q Consensus 89 ~~ 90 (232)
+.
T Consensus 77 p~ 78 (386)
T PF03435_consen 77 PF 78 (386)
T ss_dssp GG
T ss_pred cc
Confidence 64
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.8e-05 Score=57.15 Aligned_cols=177 Identities=18% Similarity=0.119 Sum_probs=111.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC---CcchHHH----hh--cC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL---EEGSFDS----AV--DG 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~----~~--~~ 79 (232)
.+++|-||-|-+|+++++.|..++|-|.-++..+.... +.-.++..|-+ +.+++.+ .+ ++
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence 67999999999999999999999998887776654321 11223444443 2222222 22 26
Q ss_pred CCEEEEcccccccCC------CCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc-ceeccCCCCCCCccccccCCC
Q 026852 80 CDGVFHTASPVIFLS------DNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI-GAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~-~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|+||+.||-..... ..+-+.+++..++..-.-.+.+.++.+.+-++-+... ....+.+.
T Consensus 73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg------------- 139 (236)
T KOG4022|consen 73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG------------- 139 (236)
T ss_pred cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc-------------
Confidence 799999997432111 1233455666666555555555555555555555433 22322221
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc-----CCcEEEEccCceeCCCCCCCC-----------cchHHHHHHHHc
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFFQPIL-----------NFGAEVILNLIN 216 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-----~i~~~~v~pg~v~g~~~~~~~-----------~~~~~~~~~~~~ 216 (232)
.-.|++.|.+.-++++.++.+. |--+..|.|-..+||+.+.-. .++.+.+.++..
T Consensus 140 ---------MIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssWTPL~fi~e~flkWtt 210 (236)
T KOG4022|consen 140 ---------MIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSWTPLSFISEHFLKWTT 210 (236)
T ss_pred ---------ccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCcccHHHHHHHHHHHhc
Confidence 1229999999999999988763 445788999999999875421 244566666665
Q ss_pred CC
Q 026852 217 GN 218 (232)
Q Consensus 217 ~~ 218 (232)
+.
T Consensus 211 ~~ 212 (236)
T KOG4022|consen 211 ET 212 (236)
T ss_pred cC
Confidence 54
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2e-05 Score=69.84 Aligned_cols=180 Identities=23% Similarity=0.174 Sum_probs=116.7
Q ss_pred CCCcEEEEECCC-ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhh----hhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 6 GEEKVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR----ELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 6 ~~~~~ilItGa~-g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
+.+++++||||+ |-||.+++..|++-|.+|+++..+.++.-.+..+ ........+-++..|...+.+++.+++
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI 473 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI 473 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence 567899999987 6699999999999999999987776543222222 222334567788899988888877765
Q ss_pred -------------------CCCEEEEccccc--ccCCCCc--hhhhhHHHHHHHHHHHHHHHhhC---Cc---cEEEEec
Q 026852 79 -------------------GCDGVFHTASPV--IFLSDNP--QADIVDPAVMGTLNVLRSCAKVH---SI---KRVVLTS 129 (232)
Q Consensus 79 -------------------~~d~vi~~Ag~~--~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~---~~---~~iv~vS 129 (232)
..|.+|-+|++- .+...-+ -+-.+.+-++...+++-.+.+.. +. -++|...
T Consensus 474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg 553 (866)
T COG4982 474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG 553 (866)
T ss_pred ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence 127888888752 2222211 13345555666666665554431 11 2456656
Q ss_pred ccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcC----CcEEEEccCceeCCCCCCCCc
Q 026852 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG----IDLVAIHPGTVIGPFFQPILN 205 (232)
Q Consensus 130 S~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~----i~~~~v~pg~v~g~~~~~~~~ 205 (232)
|...- .+.+ .+.|+-+|...+.+..+|..+.. +.++-.+.||+.|-++-...+
T Consensus 554 SPNrG-~FGg----------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Nd 610 (866)
T COG4982 554 SPNRG-MFGG----------------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHND 610 (866)
T ss_pred CCCCC-ccCC----------------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcc
Confidence 65221 1111 25599999999999999988862 455566789998877655544
Q ss_pred chH
Q 026852 206 FGA 208 (232)
Q Consensus 206 ~~~ 208 (232)
.+.
T Consensus 611 iiv 613 (866)
T COG4982 611 IIV 613 (866)
T ss_pred hhH
Confidence 433
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.9e-06 Score=72.07 Aligned_cols=116 Identities=20% Similarity=0.154 Sum_probs=75.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCC--CCcchhhhh---hhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDP--NSPKTEHLR---ELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~--~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
++|.|+|++|.+|..++..|+..|. +|++++|++ ++......+ .+....... .++-..+. +.++++|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-----~i~~~~d~-~~l~~aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-----EIKISSDL-SDVAGSD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-----EEEECCCH-HHhCCCC
Confidence 4799999999999999999999986 499999965 322211111 111111111 11111122 3488999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||-++|.-. ...+...+.++.|+.-...+.+.+.+......+|.+++.
T Consensus 75 iViitag~p~-~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np 123 (309)
T cd05294 75 IVIITAGVPR-KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP 123 (309)
T ss_pred EEEEecCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 9999998422 123344577888999999999888877555577777765
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.2e-06 Score=60.31 Aligned_cols=115 Identities=19% Similarity=0.146 Sum_probs=78.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhh--h-cCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRE--L-DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|.||+|.+|++++..|...+ .+++++++++++.....++- . .....+..... .++ +.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence 479999999999999999999996 47999999975433222221 1 11112222222 222 556689999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|-.||... .+.+...+.++.|......+.+.+.++...+.++.+|..
T Consensus 74 vitag~~~-~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNP 120 (141)
T PF00056_consen 74 VITAGVPR-KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNP 120 (141)
T ss_dssp EETTSTSS-STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSS
T ss_pred EEeccccc-cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCc
Confidence 99998532 233556788999999999999999888544566666544
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.8e-06 Score=68.01 Aligned_cols=170 Identities=15% Similarity=0.095 Sum_probs=99.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhh--hhc-CCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLR--ELD-GATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~--~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|.|+ |++|+.++..|+..| .+|++++|++++......+ ... .......... .+. +.++++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence 37899997 899999999999998 5899999988754321111 111 1111222221 222 345789999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|+++|.... +.+...+.++.|......+.+.+.++.....++++|........-. .... .++. ..
T Consensus 73 Iitag~~~~-~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~-------~~~~-----g~p~--~~ 137 (306)
T cd05291 73 VITAGAPQK-PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV-------QKLS-----GLPK--NR 137 (306)
T ss_pred EEccCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH-------HHHh-----CcCH--HH
Confidence 999985322 2345568889999999999999888755566666665422211000 0000 0000 11
Q ss_pred hHHHHHHH-HHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 164 WYSLAKTL-AEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 164 ~y~~sK~~-~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
+++..-.+ ..++...+++..+++...|+. +|.|...+.
T Consensus 138 v~g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~s 176 (306)
T cd05291 138 VIGTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGDS 176 (306)
T ss_pred EeeccchHHHHHHHHHHHHHHCCCcccceE-EEEecCCCc
Confidence 12221111 234444455567888888775 788876443
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-06 Score=74.93 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=68.2
Q ss_pred CCCCcEEEEECC---------------CCh-hHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC
Q 026852 5 EGEEKVVCVTGA---------------SGF-VASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68 (232)
Q Consensus 5 ~~~~~~ilItGa---------------~g~-iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (232)
.+++|+++|||| |+| +|.+++++|.++|++|+++.++..... ... ...+|++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~----------~~~--~~~~~v~ 249 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT----------PPG--VKSIKVS 249 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC----------CCC--cEEEEec
Confidence 478999999999 445 999999999999999999887654210 111 2457888
Q ss_pred CcchH-HHhh----cCCCEEEEcccccccCC----CC---chhhhhHHHHHHHHHHHHHHHhh
Q 026852 69 EEGSF-DSAV----DGCDGVFHTASPVIFLS----DN---PQADIVDPAVMGTLNVLRSCAKV 119 (232)
Q Consensus 69 ~~~~~-~~~~----~~~d~vi~~Ag~~~~~~----~~---~~~~~~~~n~~~~~~l~~~~~~~ 119 (232)
+.+++ +.++ .++|++|++||..-..+ .. .....+..|+.-+-.+++.+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~ 312 (390)
T TIGR00521 250 TAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI 312 (390)
T ss_pred cHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence 88777 4444 36899999999531111 00 00122345666666666665554
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-06 Score=73.53 Aligned_cols=73 Identities=25% Similarity=0.239 Sum_probs=53.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHC-C-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQR-G-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
..+++++|+||||+|.||+.++++|+++ | .+++++.|+..+... ...++ ...|+. ++.+++.++|
T Consensus 151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La~el---------~~~~i~---~l~~~l~~aD 217 (340)
T PRK14982 151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQAEL---------GGGKIL---SLEEALPEAD 217 (340)
T ss_pred cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HHHHh---------ccccHH---hHHHHHccCC
Confidence 3578899999999999999999999865 5 589999888653321 11111 113333 4667888999
Q ss_pred EEEEcccc
Q 026852 82 GVFHTASP 89 (232)
Q Consensus 82 ~vi~~Ag~ 89 (232)
+|||+++.
T Consensus 218 iVv~~ts~ 225 (340)
T PRK14982 218 IVVWVASM 225 (340)
T ss_pred EEEECCcC
Confidence 99999974
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.9e-07 Score=73.97 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=65.2
Q ss_pred EEEEECCCChhHHHHHHHHHH----CCCeEEEEEcCCCCcchhhhhhhcCC----CCceEEEEcCCCCcchHHHhhcCCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQ----RGYTVKATVRDPNSPKTEHLRELDGA----TERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
-++|-||+|+.|..+++++.+ .+...-+..||+++.. +.+++.... -.+..++.+|..|++++.+..+++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~-~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQ-EVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHH-HHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence 589999999999999999999 5778888999998765 344433211 1333488999999999999999999
Q ss_pred EEEEccccc
Q 026852 82 GVFHTASPV 90 (232)
Q Consensus 82 ~vi~~Ag~~ 90 (232)
+|+|++||.
T Consensus 86 vivN~vGPy 94 (423)
T KOG2733|consen 86 VIVNCVGPY 94 (423)
T ss_pred EEEeccccc
Confidence 999999974
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.1e-06 Score=61.45 Aligned_cols=75 Identities=20% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++++++|.|| ||+|++++.+|++.|+. |+++.|+.++.. +..+.+ ....+.++. .+++.+.++++|+|
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~-~l~~~~--~~~~~~~~~-----~~~~~~~~~~~Div 79 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAE-ALAEEF--GGVNIEAIP-----LEDLEEALQEADIV 79 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHH-HHHHHH--TGCSEEEEE-----GGGHCHHHHTESEE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHH-HHHHHc--Cccccceee-----HHHHHHHHhhCCeE
Confidence 578899999998 88999999999999986 999999976432 222333 122344432 34455777889999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|++.+
T Consensus 80 I~aT~ 84 (135)
T PF01488_consen 80 INATP 84 (135)
T ss_dssp EE-SS
T ss_pred EEecC
Confidence 98864
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.6e-05 Score=62.96 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=79.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
.+++|.|+|+ |.+|..++..|+..|. ++.+++++++.......+.... ...+..... .+ .+.++++|+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~----~~~~~~adi 76 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD----YSDCKDADL 76 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC----HHHhCCCCE
Confidence 4579999998 9999999999999986 7999999887654323221111 111222221 12 245789999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
||-.||... .+.+...+.++.|......+++.+.++.....++++|-.
T Consensus 77 vIitag~~~-k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP 124 (315)
T PRK00066 77 VVITAGAPQ-KPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNP 124 (315)
T ss_pred EEEecCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 999998532 223455688899999999999888887545566666654
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.3e-05 Score=65.85 Aligned_cols=173 Identities=13% Similarity=0.081 Sum_probs=104.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCC--cchhhhhhhcCC---CCceEEEEcCCCCcchHHHh
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNS--PKTEHLRELDGA---TERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~ 76 (232)
-+|.|+||+|.+|++++..|+..|. +++++|+++.. ..-+.++..... ..+.+ ++ ..-.+.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~~ 76 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----AT--TDPEEA 76 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Ee--cChHHH
Confidence 4799999999999999999998873 79999996532 222232221110 01111 11 233467
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
++++|+||..||... .+.+...+.++.|+.....+.+.+.++.. ...++.+|-..-....-. .+.. +
T Consensus 77 ~~daDvVVitAG~~~-k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~-------~k~s----~ 144 (323)
T TIGR01759 77 FKDVDAALLVGAFPR-KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA-------SKNA----P 144 (323)
T ss_pred hCCCCEEEEeCCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH-------HHHc----C
Confidence 789999999999532 23456678899999999999999988854 456666664322111000 0000 0
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
.++ +..+.|.+..=.-++-..+++..++....|+-.+|.|...+.
T Consensus 145 g~p--~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s 189 (323)
T TIGR01759 145 DIP--PKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSNT 189 (323)
T ss_pred CCC--HHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCCc
Confidence 000 112233233333355555666778888888777777776544
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.4e-05 Score=62.91 Aligned_cols=165 Identities=16% Similarity=0.193 Sum_probs=104.8
Q ss_pred CcEEEEECC-CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 8 EKVVCVTGA-SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 8 ~~~ilItGa-~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
..+|+|.|. +--+++.++..|-++||-|++++.+.+.. +..+... ...+.....|..++.++...+. .
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~--~~ve~e~--~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~ 78 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDE--KYVESED--RPDIRPLWLDDSDPSSIHASLSRFASLLSR 78 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHH--HHHHhcc--CCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence 368999996 89999999999999999999999887532 2222221 3346676777766665555443 1
Q ss_pred C--------------CEEEEcc------cccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-----CccEEEEe-cccce
Q 026852 80 C--------------DGVFHTA------SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-----SIKRVVLT-SSIGA 133 (232)
Q Consensus 80 ~--------------d~vi~~A------g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~v-SS~~~ 133 (232)
. ..||..- ||....+.+.|.+.+++|+..++.+++.+++.. ...++|.. -|...
T Consensus 79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s 158 (299)
T PF08643_consen 79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS 158 (299)
T ss_pred CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence 1 1222111 233345566888999999999999999998863 23555555 34422
Q ss_pred eccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCC
Q 026852 134 MLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGP 198 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~ 198 (232)
-...+. +.+-..+..+.+.+...+.+| ++|+|+.++-|+++=.
T Consensus 159 sl~~Pf----------------------hspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 159 SLNPPF----------------------HSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred ccCCCc----------------------cCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 221111 233344444445555555555 4699999999999655
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=7e-06 Score=77.15 Aligned_cols=163 Identities=21% Similarity=0.232 Sum_probs=116.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhh--hhhcCCCCceEEEEcCCCCcchHHHhhcCC--
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSAVDGC-- 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-- 80 (232)
...|..+|+||-||.|.+++.-|.++|.+ +++++|+--+...+++ ......+-++..-..|++..+....+++.+
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence 34578999999999999999999999984 7777887644332222 223333444555567787777777777744
Q ss_pred ----CEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 81 ----DGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 81 ----d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
-.|+|.|.. +.+.+.++++++.+.-+.||.++-+...+.. ...-||..||..+-.++-++
T Consensus 1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ---------- 1915 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ---------- 1915 (2376)
T ss_pred cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc----------
Confidence 688999964 4456677888888899999999988877764 34678888888666655442
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEc
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIH 191 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~ 191 (232)
.-||.+.++.|++++.-. .+|++=+.|-
T Consensus 1916 ------------tNYG~aNS~MERiceqRr-~~GfPG~AiQ 1943 (2376)
T KOG1202|consen 1916 ------------TNYGLANSAMERICEQRR-HEGFPGTAIQ 1943 (2376)
T ss_pred ------------cccchhhHHHHHHHHHhh-hcCCCcceee
Confidence 229999999999997632 2455544443
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.3e-06 Score=72.51 Aligned_cols=77 Identities=27% Similarity=0.218 Sum_probs=57.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++|+|+++ +|.++++.|++.|++|++++++......+..+++.. ..+.++.+|..+ ....++|+||
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~--~~~~~~~~~~~~-----~~~~~~d~vv 73 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE--LGIELVLGEYPE-----EFLEGVDLVV 73 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh--cCCEEEeCCcch-----hHhhcCCEEE
Confidence 36789999999888 999999999999999999999763222222233322 235677788775 3456789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
+++|.
T Consensus 74 ~~~g~ 78 (450)
T PRK14106 74 VSPGV 78 (450)
T ss_pred ECCCC
Confidence 99984
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.6e-05 Score=61.97 Aligned_cols=177 Identities=16% Similarity=0.059 Sum_probs=104.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|.|+|++|.+|++++..|+..+ .++++++++ +..-+.++.... ......... ...+++.+.++++|+||-.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~-~~~~~i~~~--~~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHI-NTPAKVTGY--LGPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhC-CCcceEEEe--cCCCchHHhcCCCCEEEEe
Confidence 379999999999999999999887 479999988 222222221111 111111111 1223456788899999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccC-CCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLN-ETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||... .+.+...+.++.|......+.+...++.....++++|-..-.... -. ....+.+.++ +....
T Consensus 76 aG~~~-k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t----~~~~~~s~~p-------~~rvi 143 (310)
T cd01337 76 AGVPR-KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAA----EVLKKAGVYD-------PKRLF 143 (310)
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHH----HHHHHhcCCC-------HHHEE
Confidence 99532 234556788999999999999999888555667777766422100 00 0000000000 01112
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC-CCCC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF-FQPI 203 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~-~~~~ 203 (232)
|.+-.=..++...++++.|+....|+ ++|.|.+ .+..
T Consensus 144 G~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeHsGds~ 181 (310)
T cd01337 144 GVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGHSGVTI 181 (310)
T ss_pred eeechHHHHHHHHHHHHhCcCHHHEE-EEEEecCCCCce
Confidence 33211113455556667788877777 7888888 5553
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.8e-05 Score=62.03 Aligned_cols=190 Identities=13% Similarity=0.066 Sum_probs=105.2
Q ss_pred CCcEEEEECCCChhHHHHHH-----HHHHCC----CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh
Q 026852 7 EEKVVCVTGASGFVASWLVK-----LLLQRG----YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~-----~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
+++..++-+++|.|+..+.. +.-.-+ |.|.+++|++.+.. ..+.+ .|..-..-
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-itw~e------------l~~~Gip~----- 72 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-ITWPE------------LDFPGIPI----- 72 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-cccch------------hcCCCCce-----
Confidence 45789999999999977765 333333 88999999997543 22222 22221110
Q ss_pred cCCCEEEEcccccccCCCCchhhhhHHHHH-----HHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 78 DGCDGVFHTASPVIFLSDNPQADIVDPAVM-----GTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 78 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~-----~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
.||..+|.+|.....+..-|...|+.|++ .+..++++..... ..+..|++|..+.+.++... +.+|+.
T Consensus 73 -sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~-----eY~e~~ 146 (315)
T KOG3019|consen 73 -SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQ-----EYSEKI 146 (315)
T ss_pred -ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccc-----cccccc
Confidence 24444555543222222234444444444 5566666665542 23579999999665554432 222322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHH-HHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCCCCCCccceeeee
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWK-FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMI 230 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~-~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (232)
. +..+.....+.-++-.. ......+|+..+|.|.|.|-........+..| +.-.|...|+|.|+-.||
T Consensus 147 ~---------~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF--~~g~GGPlGsG~Q~fpWI 215 (315)
T KOG3019|consen 147 V---------HQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPF--QMGAGGPLGSGQQWFPWI 215 (315)
T ss_pred c---------cCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhh--hhccCCcCCCCCeeeeee
Confidence 1 11123222322222211 11124699999999999987654433222222 223355999999999999
Q ss_pred c
Q 026852 231 Y 231 (232)
Q Consensus 231 ~ 231 (232)
|
T Consensus 216 H 216 (315)
T KOG3019|consen 216 H 216 (315)
T ss_pred e
Confidence 8
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.1e-05 Score=64.41 Aligned_cols=174 Identities=13% Similarity=0.070 Sum_probs=102.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCC--cchhhhhhhcC---CCCceEEEEcCCCCcchHHH
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNS--PKTEHLRELDG---ATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~ 75 (232)
.++|.|+|++|.+|+.++..|+..|. +++++|+++.. ...+.++.... ...++. ++ ....+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~--~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----IT--DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Ee--cChHH
Confidence 36899999999999999999988763 68999986542 22122221111 001122 12 23346
Q ss_pred hhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 76 AVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 76 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
.++++|+||-+||... .+.+...+.++.|......+.+...++. ....++.+|...-....-. .+..
T Consensus 77 ~~~daDiVVitaG~~~-k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~-------~k~s---- 144 (326)
T PRK05442 77 AFKDADVALLVGARPR-GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA-------MKNA---- 144 (326)
T ss_pred HhCCCCEEEEeCCCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH-------HHHc----
Confidence 7789999999998532 2345667889999999999999988864 3556777775422211000 0000
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
|.++. ..+.+.+..=.-++...+++..+++...|+.-.|.|...+.
T Consensus 145 ~g~p~--~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~s 190 (326)
T PRK05442 145 PDLPA--ENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSAT 190 (326)
T ss_pred CCCCH--HHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcCc
Confidence 00111 11223322223355555666678877777665667765443
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.7e-05 Score=60.07 Aligned_cols=73 Identities=16% Similarity=0.177 Sum_probs=45.8
Q ss_pred CCCcEEEEECC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC
Q 026852 6 GEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (232)
Q Consensus 6 ~~~~~ilItGa----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (232)
++||+||||+| ||-+|.+++++++.+|++|+++....+-.. ...+..++ +..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~----------p~~~~~i~--v~s 68 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP----------PPGVKVIR--VES 68 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEEE---SS
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc----------cccceEEE--ecc
Confidence 46899999986 689999999999999999999987742110 22455544 444
Q ss_pred cchH----HHhhcCCCEEEEccccc
Q 026852 70 EGSF----DSAVDGCDGVFHTASPV 90 (232)
Q Consensus 70 ~~~~----~~~~~~~d~vi~~Ag~~ 90 (232)
.+++ .+.++++|++||+|++.
T Consensus 69 a~em~~~~~~~~~~~Di~I~aAAVs 93 (185)
T PF04127_consen 69 AEEMLEAVKELLPSADIIIMAAAVS 93 (185)
T ss_dssp HHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred hhhhhhhhccccCcceeEEEecchh
Confidence 4443 34455789999999853
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00034 Score=60.99 Aligned_cols=173 Identities=12% Similarity=0.052 Sum_probs=105.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-------CC--eEEEEEcCCCCcchhhhhhhcCC---CCceEEEEcCCCCcchHHHh
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-------GY--TVKATVRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~ 76 (232)
-+|.|+|++|.+|.+++..|+.. +. +++++++++++..-+.++..... ..++.+.. .+ .+.
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~----ye~ 173 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DP----YEV 173 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CC----HHH
Confidence 47999999999999999999987 54 78889999876654333322111 11221111 12 366
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHh-hCCccEEEEecccceeccCCCCCCCccccccC-CCCC
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAK-VHSIKRVVLTSSIGAMLLNETPMTPDVVIDET-WFSN 154 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~-~~~~ 154 (232)
++++|+||-.||.-- .+.+...+.++.|......+.+.+.+ ......+|.+|...-....-. .+.. .++.
T Consensus 174 ~kdaDiVVitAG~pr-kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~-------~k~sg~~~~ 245 (444)
T PLN00112 174 FQDAEWALLIGAKPR-GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC-------LKNAPNIPA 245 (444)
T ss_pred hCcCCEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH-------HHHcCCCCc
Confidence 788999999998532 23455678899999999999999888 445566777775422210000 0000 0000
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...-..+..=..++...++++.++....|+-++|.|...+..
T Consensus 246 -------rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsq 287 (444)
T PLN00112 246 -------KNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQ 287 (444)
T ss_pred -------ceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCce
Confidence 000011111222444555667789988888888888776543
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00012 Score=61.54 Aligned_cols=121 Identities=19% Similarity=0.114 Sum_probs=78.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.++|.|.|| |.+|+.++..++..| +++++++++++......++.... .........+....+.+ .++++|+||
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~--~~~~~~~~~i~~~~d~~-~l~~ADiVV 78 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHF--STLVGSNINILGTNNYE-DIKDSDVVV 78 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhh--ccccCCCeEEEeCCCHH-HhCCCCEEE
Confidence 35679999997 999999999999888 78999999886543323321111 01000001111123344 668999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
.+||.... ......+.+..|..-...+++.+.+......++++|..
T Consensus 79 itag~~~~-~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP 124 (319)
T PTZ00117 79 ITAGVQRK-EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNP 124 (319)
T ss_pred ECCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 99985322 23345677888888788888888777444557776654
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00016 Score=59.18 Aligned_cols=117 Identities=18% Similarity=0.055 Sum_probs=77.5
Q ss_pred EEEECCCChhHHHHHHHHHHCC----CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 11 VCVTGASGFVASWLVKLLLQRG----YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|.|.||+|.+|..++..|+..| .+|+++|+++++......+ +...... . ....++-.++..+.++++|+||..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d-l~~~~~~-~-~~~~i~~~~d~~~~~~~aDiVv~t 77 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD-LQDAVEP-L-ADIKVSITDDPYEAFKDADVVIIT 77 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH-HHHhhhh-c-cCcEEEECCchHHHhCCCCEEEEC
Confidence 4789999999999999999998 7899999988655432221 1110000 0 112222233456778899999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+|.-.. ....-...+..|+.....+++.+.+......++++|-.
T Consensus 78 ~~~~~~-~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP 121 (263)
T cd00650 78 AGVGRK-PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNP 121 (263)
T ss_pred CCCCCC-cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 985322 22333566778999899999888887555566666544
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00036 Score=58.39 Aligned_cols=169 Identities=17% Similarity=0.186 Sum_probs=97.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+|.|.|+ |.+|..++..|++.| .+|+++++++++...+..+.... ......... .+. +.++++|++|.
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVVI 73 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEEE
Confidence 6999998 899999999999999 58999999886543222221111 011122211 122 34789999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
+++.... +.+...+.+..|+.....+.+.+.++...+.++.++.......... .+.+. + .+..++
T Consensus 74 ta~~~~~-~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~-------~~~sg-----~--p~~~vi 138 (308)
T cd05292 74 TAGANQK-PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA-------YKLSG-----L--PPNRVI 138 (308)
T ss_pred ccCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH-------HHHHC-----c--CHHHee
Confidence 9985322 2344567788899888888888887744455666654322111000 00000 0 001122
Q ss_pred HHHHHH-HHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 166 SLAKTL-AEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 166 ~~sK~~-~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
|..-.+ ..++...+++..+++...|+ ++|.|.+.+.
T Consensus 139 G~gt~LDs~R~~~~la~~~~v~~~~v~-~~viGeHg~~ 175 (308)
T cd05292 139 GSGTVLDTARFRYLLGEHLGVDPRSVH-AYIIGEHGDS 175 (308)
T ss_pred cccchhhHHHHHHHHHHHhCCCcccee-ceeeccCCCc
Confidence 222122 23444556667788888886 5577876443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00078 Score=56.68 Aligned_cols=120 Identities=14% Similarity=0.101 Sum_probs=78.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcC---CCCceEEEEcCCCCcchHHHhhcCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+.+.++|.|.|| |.+|+.++..++..|. +|++++++++....+.++.... ......+.. .+| . +.++++
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~-~~l~~a 75 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---Y-EDIAGS 75 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---H-HHhCCC
Confidence 356689999995 8899999999999994 8999999987543233322111 111122211 022 2 456899
Q ss_pred CEEEEcccccccCCCC-----chhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccc
Q 026852 81 DGVFHTASPVIFLSDN-----PQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~ 132 (232)
|+||.+||.... +.+ ...+.+..|+.-...+++.+.+......++++|-..
T Consensus 76 DiVI~tag~~~~-~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~ 131 (321)
T PTZ00082 76 DVVIVTAGLTKR-PGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPL 131 (321)
T ss_pred CEEEECCCCCCC-CCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 999999985321 112 446677888888888888877774444677666543
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00042 Score=58.00 Aligned_cols=117 Identities=15% Similarity=0.059 Sum_probs=79.1
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+|.|+|++|.+|++++..|+..+. +++++|+++... +.++.... .......... +.+++.+.++++|+||-.|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g--~a~DL~~~-~~~~~i~~~~--~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAG--VAADLSHI-PTAASVKGFS--GEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcE--EEchhhcC-CcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence 488999999999999999998875 789999887222 22221111 1111111101 1123567889999999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccc
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~ 132 (232)
|... .+.+...+.++.|......+.+...++.....++.+|-..
T Consensus 76 G~~~-~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPv 119 (312)
T TIGR01772 76 GVPR-KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPV 119 (312)
T ss_pred CCCC-CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCch
Confidence 9532 2344567889999999999999888885555677777664
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00044 Score=60.86 Aligned_cols=120 Identities=17% Similarity=0.080 Sum_probs=75.2
Q ss_pred EECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccccccc
Q 026852 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIF 92 (232)
Q Consensus 13 ItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag~~~~ 92 (232)
|+||+|++|.++++.|...|++|+.+.+.+.+... . ...++.-+-.|.+..+..
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-----~--~~~~~~~~~~d~~~~~~~------------------- 96 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-----G--WGDRFGALVFDATGITDP------------------- 96 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCcccccccc-----C--cCCcccEEEEECCCCCCH-------------------
Confidence 78888999999999999999999987665542110 0 011111111222222111
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHH
Q 026852 93 LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTL 171 (232)
Q Consensus 93 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~ 171 (232)
+ .+.+...+++.+.+.+ ..++||+++|.....+ ...|+.+|++
T Consensus 97 ------~-----~l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~-------------------------~~~~~~akaa 140 (450)
T PRK08261 97 ------A-----DLKALYEFFHPVLRSLAPCGRVVVLGRPPEAAA-------------------------DPAAAAAQRA 140 (450)
T ss_pred ------H-----HHHHHHHHHHHHHHhccCCCEEEEEccccccCC-------------------------chHHHHHHHH
Confidence 1 1223344555555543 3469999998754311 0238889999
Q ss_pred HHHHHHHHHHhc--CCcEEEEccCc
Q 026852 172 AEEAAWKFAKEN--GIDLVAIHPGT 194 (232)
Q Consensus 172 ~~~~~~~~~~~~--~i~~~~v~pg~ 194 (232)
.+.+.+.+++|. +++++.+.|+.
T Consensus 141 l~gl~rsla~E~~~gi~v~~i~~~~ 165 (450)
T PRK08261 141 LEGFTRSLGKELRRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHHHHHHhhcCCEEEEEecCC
Confidence 999988888874 89999999875
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.81 E-value=9e-05 Score=59.16 Aligned_cols=73 Identities=21% Similarity=0.290 Sum_probs=58.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
|+++|.|++. +|+.+++.|.++|++|++++++++. .++........+.+.+|.++++.+.++ ++++|+++-..
T Consensus 1 m~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~-----~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 1 MKIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEER-----VEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred CEEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHH-----HHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence 4577777655 9999999999999999999999853 333222234678999999999999999 88899998554
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.4e-05 Score=60.68 Aligned_cols=72 Identities=13% Similarity=0.117 Sum_probs=54.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+|||+||||. |+.+++.|.++|++|+++.+++..... +. . .+ ...+..+..|.+++.+++. ++|+||+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~--~~---~-~g-~~~v~~g~l~~~~l~~~l~~~~i~~VIDA 72 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL--YP---I-HQ-ALTVHTGALDPQELREFLKRHSIDILVDA 72 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccc--cc---c-cC-CceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence 47999999998 999999999999999999999864321 11 1 11 2234456667788888876 58999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+.
T Consensus 73 tH 74 (256)
T TIGR00715 73 TH 74 (256)
T ss_pred CC
Confidence 85
|
This enzyme was found to be a monomer by gel filtration. |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00065 Score=56.76 Aligned_cols=120 Identities=16% Similarity=0.102 Sum_probs=76.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++|-|.|+ |.+|..++..++..|. +|++++++++....+..+..... ........++-..+... ++++|+||-+|
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~--~~~~~~~~i~~t~d~~~-~~~aDiVIita 77 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEAS--PVGGFDTKVTGTNNYAD-TANSDIVVITA 77 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhh--hccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence 47899997 9999999999999886 89999997653321222111100 00000111211122333 57899999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccce
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGA 133 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~ 133 (232)
|.... ..+...+.+..|+.....+++.+.++.....+|++|....
T Consensus 78 g~p~~-~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~d 122 (305)
T TIGR01763 78 GLPRK-PGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLD 122 (305)
T ss_pred CCCCC-cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 84321 2334456788899999999998888755566777776533
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.77 E-value=6.2e-05 Score=56.23 Aligned_cols=74 Identities=18% Similarity=0.150 Sum_probs=50.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++++++|+|+ |++|..+++.|.+.| ++|++++|++++.. +..+++... .+..+..+ ..++++++|+||
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~-~~~~~~~~~-----~~~~~~~~---~~~~~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAK-ALAERFGEL-----GIAIAYLD---LEELLAEADLII 86 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH-HHHHHHhhc-----ccceeecc---hhhccccCCEEE
Confidence 56789999998 899999999999996 78999999875432 122222110 01223333 334478899999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
++...
T Consensus 87 ~~~~~ 91 (155)
T cd01065 87 NTTPV 91 (155)
T ss_pred eCcCC
Confidence 99864
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0011 Score=55.34 Aligned_cols=113 Identities=18% Similarity=0.170 Sum_probs=76.9
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhc---CCC-CceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELD---GAT-ERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
||.|.|+ |.+|..++..|+..+. +++++++++++..-+.++... ... .++.....| .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence 4789998 9999999999998874 799999987655433333211 111 133333322 3667889999
Q ss_pred EEcccccccCCCCc--hhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNP--QADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|-.||.... +.+. -.+.++.|......+.+.+.++...+.++.+|-.
T Consensus 73 vitaG~~~k-pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNP 121 (307)
T cd05290 73 VITAGPSID-PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNP 121 (307)
T ss_pred EECCCCCCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 999995321 1222 3678899999999999998888444555555554
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00033 Score=61.12 Aligned_cols=173 Identities=14% Similarity=0.063 Sum_probs=101.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHC---CC----eEEEEEcC--CCCcchhhhhhh--c-CCCCceEEEEcCCCCcchHHHh
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR---GY----TVKATVRD--PNSPKTEHLREL--D-GATERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~---g~----~V~~~~r~--~~~~~~~~~~~~--~-~~~~~~~~~~~D~~~~~~~~~~ 76 (232)
-+|+||||+|.||.+++-.+++= |. .+++++.. .+...-...+.. . .....+... ..-.+.
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-------~~~~ea 196 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-------TDLDVA 196 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-------ECCHHH
Confidence 47999999999999999999873 32 34556663 332221222111 1 101122222 123477
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecc-cceeccCCCCCCCccccccCCCCC
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSS-IGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS-~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
++++|+||-.||..- ...+...+.++.|......+.+.+.++.. ..+++.+.| ..-....-. ... .
T Consensus 197 ~~daDvvIitag~pr-k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~-------~k~----a 264 (452)
T cd05295 197 FKDAHVIVLLDDFLI-KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL-------IKY----A 264 (452)
T ss_pred hCCCCEEEECCCCCC-CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH-------HHH----c
Confidence 889999999998532 23445678899999999999998888732 145665554 211100000 000 0
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
|.++ +....+.+.....++...++++.|++...|+-++|.|...+.
T Consensus 265 pgiP--~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~s 310 (452)
T cd05295 265 PSIP--RKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGN 310 (452)
T ss_pred CCCC--HHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCc
Confidence 0011 112234444555566667777889998888888888876554
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00065 Score=56.48 Aligned_cols=116 Identities=20% Similarity=0.122 Sum_probs=75.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++|.|+|| |++|++++..|+..+ -+++++++++++..-.+++..... ...-..+..| .+ .+.++++|+|+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv 74 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV 74 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence 47999999 999999999998775 379999999654432222211110 1111222222 11 46678899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-.||..- .+-..-.+.++.|......+.+...+......++.++-.
T Consensus 75 itAG~pr-KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNP 120 (313)
T COG0039 75 ITAGVPR-KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNP 120 (313)
T ss_pred EeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCc
Confidence 9998432 122445677899999999999998887443455555544
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.9e-05 Score=60.87 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=50.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++++++|+|+ ||+|++++..|++.| .+|++++|+.++.. ...+.+... ..+.+ +. +....+.++|+|
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~-~l~~~~~~~-~~~~~---~~----~~~~~~~~~Div 189 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAE-ELAKLFGAL-GKAEL---DL----ELQEELADFDLI 189 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhc-cceee---cc----cchhccccCCEE
Confidence 367789999997 899999999999999 68999999975432 222222211 11111 11 223556789999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
||+..
T Consensus 190 InaTp 194 (278)
T PRK00258 190 INATS 194 (278)
T ss_pred EECCc
Confidence 98874
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0014 Score=54.99 Aligned_cols=115 Identities=17% Similarity=0.098 Sum_probs=77.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++|.|+|+ |.+|..++..|+..|. +++++++++++..-+.++..... ......... .|+ +.++++|+||
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy----~~~~~adivv 76 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY----SVTANSKVVI 76 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH----HHhCCCCEEE
Confidence 58999997 9999999999998874 68999998864433332211110 011122211 122 2468899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-+||.... +.+...+.++.|+.....+.+.+.++.....++++|..
T Consensus 77 itaG~~~k-~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP 122 (312)
T cd05293 77 VTAGARQN-EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNP 122 (312)
T ss_pred ECCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccCh
Confidence 99985322 23455678899999999999998888555667777754
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0009 Score=55.94 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=73.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++|.|.|+ |.+|..++..++..|. +|++++++++.......+ +... .........++...+. +.++++|+||.++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~d-l~~~-~~~~~~~~~i~~~~d~-~~~~~aDiVii~~ 78 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALD-IAEA-APVEGFDTKITGTNDY-EDIAGSDVVVITA 78 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHH-HHhh-hhhcCCCcEEEeCCCH-HHHCCCCEEEECC
Confidence 58999999 9999999999999875 899999987654322221 1100 0000001111111223 3468999999998
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|.-. .......+.+..|+.-...+++.+.+......+|+++-.
T Consensus 79 ~~p~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP 121 (307)
T PRK06223 79 GVPR-KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNP 121 (307)
T ss_pred CCCC-CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 7422 123344566778888888888887777444456666543
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00028 Score=53.61 Aligned_cols=57 Identities=26% Similarity=0.228 Sum_probs=48.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+++++|+|.|++..+|..+++.|.++|++|+++.|+. +++.+.++++|+|
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------------~~l~~~l~~aDiV 91 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------------KNLKEHTKQADIV 91 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------------hhHHHHHhhCCEE
Confidence 358899999999988889999999999999998888763 2455677889999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.+.+
T Consensus 92 Isat~ 96 (168)
T cd01080 92 IVAVG 96 (168)
T ss_pred EEcCC
Confidence 98875
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00023 Score=58.42 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=48.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.++|+++|+|+ |++|++++..|++.|++|++++|++++.. +..+.+... ........+ + ....++|+|||
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~-~la~~~~~~-~~~~~~~~~-----~--~~~~~~DivIn 184 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE-ELAERFQRY-GEIQAFSMD-----E--LPLHRVDLIIN 184 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhc-CceEEechh-----h--hcccCccEEEE
Confidence 35789999999 69999999999999999999999875432 222222211 112222111 1 12356899999
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
+.+.
T Consensus 185 atp~ 188 (270)
T TIGR00507 185 ATSA 188 (270)
T ss_pred CCCC
Confidence 9853
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0011 Score=56.29 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=77.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++|.|+|+ |.+|++++..|+..+. +++++++++++..-...+.... ......+. .+ .+ . +.++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~-~d---y-~~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-AS-TD---Y-AVTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eC-CC---H-HHhCCCCEEE
Confidence 69999996 9999999999998874 7999999886544333321111 01112221 10 12 2 3478899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-.||.... +.+...+.+..|+.....+.+...++.....++++|-.
T Consensus 111 itAG~~~k-~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNP 156 (350)
T PLN02602 111 VTAGARQI-PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNP 156 (350)
T ss_pred ECCCCCCC-cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 99995321 23445678889999999999988887555666776654
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0016 Score=55.17 Aligned_cols=79 Identities=23% Similarity=0.321 Sum_probs=55.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCC-------------------cch----hhhhhhcCCCCceE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS-------------------PKT----EHLRELDGATERLH 61 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~-------------------~~~----~~~~~~~~~~~~~~ 61 (232)
+++++|+|.|+ |++|+++++.|++.|. +++++|++.-. .+. +.+.++ ...-+++
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-np~v~i~ 99 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-NSEVEIV 99 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH-CCCcEEE
Confidence 56688999997 6699999999999997 78888876411 011 111222 2234566
Q ss_pred EEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 62 LFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 62 ~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.+..|++ .+.+.++++++|+||.+.
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~ 124 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEVDLIIDAT 124 (338)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEEcC
Confidence 6777775 456778899999999774
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00026 Score=67.65 Aligned_cols=76 Identities=17% Similarity=0.106 Sum_probs=58.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC-CCe-------------EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR-GYT-------------VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (232)
++|+|+|.|| |+||+..++.|++. +++ |.+.+++++.. +.+.....++..++.|++|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a-----~~la~~~~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDA-----KETVEGIENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHH-----HHHHHhcCCCceEEeecCCHHH
Confidence 4678999997 99999999999876 333 77777776432 2222112356789999999999
Q ss_pred HHHhhcCCCEEEEccc
Q 026852 73 FDSAVDGCDGVFHTAS 88 (232)
Q Consensus 73 ~~~~~~~~d~vi~~Ag 88 (232)
+.++++++|+||++..
T Consensus 642 L~~~v~~~DaVIsalP 657 (1042)
T PLN02819 642 LLKYVSQVDVVISLLP 657 (1042)
T ss_pred HHHhhcCCCEEEECCC
Confidence 9999999999999985
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0018 Score=55.61 Aligned_cols=171 Identities=12% Similarity=0.071 Sum_probs=98.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-e----EEE--E--EcCCCCcchhhhhhhcCC---CCceEEEEcCCCCcchHHHh
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-T----VKA--T--VRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~ 76 (232)
-+|.|+||+|.+|++++-.|+..|. . |.+ + +++.++...+.++..... ..++.... .-.+.
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-------~~y~~ 117 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-------DPYEV 117 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-------CCHHH
Confidence 4799999999999999999998863 2 343 3 677665543333221110 11221111 12367
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC-CCCC
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET-WFSN 154 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~-~~~~ 154 (232)
++++|+||-.||... .+.+...+.++.|+.....+.+.+.++. ...++|.+|-..-....-. .+.. .++.
T Consensus 118 ~kdaDIVVitAG~pr-kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~-------~k~sg~~~~ 189 (387)
T TIGR01757 118 FEDADWALLIGAKPR-GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA-------MKNAPNIPR 189 (387)
T ss_pred hCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH-------HHHcCCCcc
Confidence 788999999998532 2345667889999999999999988863 3456666665422110000 0000 0000
Q ss_pred hhhccccchhH-HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 155 PVLCKENKEWY-SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 155 ~~~~~~~~~~y-~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
... ..+..=..++...++++.++....|+-++|.|...+.
T Consensus 190 --------rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds 230 (387)
T TIGR01757 190 --------KNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHSTT 230 (387)
T ss_pred --------cEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCCc
Confidence 001 1112222344455556677877777777777776543
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0005 Score=60.52 Aligned_cols=72 Identities=18% Similarity=0.151 Sum_probs=57.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
|+++|.|+ |.+|.++++.|.+.|++|++++++++.. +.+.. ...+.++.+|.++.+.+.++ ++++|.+|-+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~-----~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERL-----RRLQD-RLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHH-----HHHHh-hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 36889998 9999999999999999999999987532 22221 13478889999999999888 88899888664
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0023 Score=54.21 Aligned_cols=80 Identities=23% Similarity=0.330 Sum_probs=54.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCC-------------------cchhh-hhhhc--CCCCceEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS-------------------PKTEH-LRELD--GATERLHL 62 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~-------------------~~~~~-~~~~~--~~~~~~~~ 62 (232)
++..+|+|.|+ ||+|+++++.|++.|. ++.++|.+.-. .+.+. .+.+. +..-++..
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 56678999999 7899999999999998 89998876311 01111 11122 22344566
Q ss_pred EEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 63 FKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 63 ~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+..+++ .+.+.++++++|+||.+.
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~ 124 (339)
T PRK07688 101 IVQDVT-AEELEELVTGVDLIIDAT 124 (339)
T ss_pred EeccCC-HHHHHHHHcCCCEEEEcC
Confidence 666764 456677889999999774
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00061 Score=59.92 Aligned_cols=75 Identities=20% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-CCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi 84 (232)
+++|+++|||+++ +|.++++.|++.|++|++.+++..... ...+.+... .+.++... +... .+. ++|.||
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~-~~~~~l~~~--g~~~~~~~--~~~~---~~~~~~d~vV 73 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSEN-PEAQELLEE--GIKVICGS--HPLE---LLDEDFDLMV 73 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccch-hHHHHHHhc--CCEEEeCC--CCHH---HhcCcCCEEE
Confidence 5789999999987 999999999999999999988764322 112222221 23332221 1111 123 489999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
+++|.
T Consensus 74 ~s~gi 78 (447)
T PRK02472 74 KNPGI 78 (447)
T ss_pred ECCCC
Confidence 99974
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0029 Score=49.57 Aligned_cols=79 Identities=19% Similarity=0.249 Sum_probs=53.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcC---CCCcch-------------hhh-hhhc--CCCCceEEEEc
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRD---PNSPKT-------------EHL-RELD--GATERLHLFKA 65 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~---~~~~~~-------------~~~-~~~~--~~~~~~~~~~~ 65 (232)
++.++|+|.|+ |++|+.+++.|++.|. +++++|++ ++.... +.+ +.+. ....++..+..
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 55678999998 6699999999999998 69998877 321111 001 1111 11245556666
Q ss_pred CCCCcchHHHhhcCCCEEEEc
Q 026852 66 NLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 66 D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+++ .+.+.++++++|+||-+
T Consensus 98 ~i~-~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 98 KIT-EENIDKFFKDADIVCEA 117 (200)
T ss_pred eCC-HhHHHHHhcCCCEEEEC
Confidence 664 46677888999999966
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0021 Score=45.39 Aligned_cols=69 Identities=20% Similarity=0.322 Sum_probs=51.9
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
|+|.|.+ .+|..+++.|.+.+.+|++++++++. .+++.. ..+.++.+|.++++.++++ +++++.+|-..
T Consensus 1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~-----~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPER-----VEELRE--EGVEVIYGDATDPEVLERAGIEKADAVVILT 70 (116)
T ss_dssp EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHH-----HHHHHH--TTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHH-----HHHHHh--cccccccccchhhhHHhhcCccccCEEEEcc
Confidence 5677775 69999999999977799999999843 333332 2267999999999999887 67888887554
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.002 Score=53.70 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=74.8
Q ss_pred EEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhh--hhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 11 VCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|.|.|+ |++|..++..|+..| .+++++++++++......+ .............. .+ .+.++++|+||.+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit 73 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence 457887 679999999999988 5799999988654332221 11111111122211 11 3577899999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
||... .+.+...+.+..|+.....+.+.+.++.....++++|..
T Consensus 74 ag~p~-~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP 117 (300)
T cd00300 74 AGAPR-KPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNP 117 (300)
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCh
Confidence 98532 123455677889999999999998887555666666654
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00067 Score=56.10 Aligned_cols=75 Identities=20% Similarity=0.229 Sum_probs=50.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++++++|.|+ ||.|++++..|++.|+ +|++++|+.++.+ ...+.+........+.. .+++.+.++++|+||
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~-~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVI 197 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAA-ALADELNARFPAARATA-----GSDLAAALAAADGLV 197 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEE
Confidence 56789999998 5599999999999997 7999999876543 22222221111122211 233445667899999
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
|+.
T Consensus 198 naT 200 (284)
T PRK12549 198 HAT 200 (284)
T ss_pred ECC
Confidence 884
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00074 Score=55.93 Aligned_cols=70 Identities=19% Similarity=0.143 Sum_probs=51.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+++++|.|+ |++|+.+++.|...|++|++.+|+++... ...+. .... ...+++.++++++|+||
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~--~~~~~-----g~~~-----~~~~~l~~~l~~aDiVi 214 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA--RITEM-----GLIP-----FPLNKLEEKVAEIDIVI 214 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHC-----CCee-----ecHHHHHHHhccCCEEE
Confidence 467899999999 66999999999999999999999874321 11111 1111 12455677888999999
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
++.
T Consensus 215 nt~ 217 (287)
T TIGR02853 215 NTI 217 (287)
T ss_pred ECC
Confidence 875
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00025 Score=58.71 Aligned_cols=77 Identities=16% Similarity=0.246 Sum_probs=58.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
..++|-||+|+.|.-++++|+++|.+..+-.||..+.. ++.... ..+...+.+. +++.+.+..+++++|+||+|
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~--~l~~~L--G~~~~~~p~~--~p~~~~~~~~~~~VVlncvG 80 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLD--ALRASL--GPEAAVFPLG--VPAALEAMASRTQVVLNCVG 80 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHH--HHHHhc--CccccccCCC--CHHHHHHHHhcceEEEeccc
Confidence 46999999999999999999999999888889986542 222211 1233333333 38889999999999999999
Q ss_pred ccc
Q 026852 89 PVI 91 (232)
Q Consensus 89 ~~~ 91 (232)
|..
T Consensus 81 Pyt 83 (382)
T COG3268 81 PYT 83 (382)
T ss_pred ccc
Confidence 854
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0011 Score=56.88 Aligned_cols=75 Identities=20% Similarity=0.152 Sum_probs=54.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+..++++|.|+ |.+|+..++.+.+.|++|++++|++.+. +.+...... .+..+..+.+.+.+.++++|+||+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-----~~l~~~~g~--~v~~~~~~~~~l~~~l~~aDvVI~ 236 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-----RQLDAEFGG--RIHTRYSNAYEIEDAVKRADLLIG 236 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-----HHHHHhcCc--eeEeccCCHHHHHHHHccCCEEEE
Confidence 45577999988 7899999999999999999999987432 111111111 122345667788888999999998
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+++
T Consensus 237 a~~ 239 (370)
T TIGR00518 237 AVL 239 (370)
T ss_pred ccc
Confidence 874
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0012 Score=58.17 Aligned_cols=75 Identities=25% Similarity=0.413 Sum_probs=57.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi 84 (232)
...++++|.|+ |.+|+.+++.|.+.|++|++++++++.. +.+......+..+.+|.++.+.+.++ ++++|.||
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~-----~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi 302 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA-----EELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI 302 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence 34578999999 8999999999999999999999988532 22222223567889999999888654 67889888
Q ss_pred Ec
Q 026852 85 HT 86 (232)
Q Consensus 85 ~~ 86 (232)
-+
T Consensus 303 ~~ 304 (453)
T PRK09496 303 AL 304 (453)
T ss_pred EC
Confidence 54
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0007 Score=58.88 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=53.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+.+++++|.|+ |++|+.++++|.+.|. +++++.|+.++.. ...+++.. ..+...+++.+.+.++|+|
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~-~La~~~~~---------~~~~~~~~l~~~l~~aDiV 246 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQ-KITSAFRN---------ASAHYLSELPQLIKKADII 246 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHHhcC---------CeEecHHHHHHHhccCCEE
Confidence 467899999999 8999999999999995 7999999875432 12222210 1223346677888899999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|++.+
T Consensus 247 I~aT~ 251 (414)
T PRK13940 247 IAAVN 251 (414)
T ss_pred EECcC
Confidence 99986
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0037 Score=52.16 Aligned_cols=113 Identities=17% Similarity=0.124 Sum_probs=70.2
Q ss_pred EEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhh---cCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLREL---DGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|.|.|| |.+|+.++..++..|. +|++++++++.......+.. ........ ++-..+. +.++++|+||.+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-----I~~t~d~-~~l~dADiVIit 73 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-----VTGTNDY-EDIAGSDVVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-----EEEcCCH-HHhCCCCEEEEe
Confidence 468898 8999999999998876 99999999764322112111 11011111 1111112 447899999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+|.... ..+...+.+..|+.-...+++.+.+......+|++|-.
T Consensus 74 ~g~p~~-~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP 117 (300)
T cd01339 74 AGIPRK-PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNP 117 (300)
T ss_pred cCCCCC-cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 984221 22334456677888888888888777444555666644
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00051 Score=61.70 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=34.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~ 414 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYER 414 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 367899999999 699999999999999999999997643
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0034 Score=49.27 Aligned_cols=80 Identities=18% Similarity=0.156 Sum_probs=52.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chh-hhhhhcC--CCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTE-HLRELDG--ATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~--~~~~~~~~~ 64 (232)
+++++|+|.| .|++|+++++.|++.|. +++++|.+.-.. ..+ ..+.+.. ..-+++.+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 5667899998 56799999999999997 788888663110 001 1112221 123444455
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.++. .+.+.+.++++|+||.+.
T Consensus 98 ~~i~-~~~~~~~~~~~D~Vi~~~ 119 (202)
T TIGR02356 98 ERVT-AENLELLINNVDLVLDCT 119 (202)
T ss_pred hcCC-HHHHHHHHhCCCEEEECC
Confidence 5553 356777889999999774
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00041 Score=54.35 Aligned_cols=41 Identities=24% Similarity=0.196 Sum_probs=36.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+...+++|+++|+|.+ .+|+++++.|.+.|++|++.+++++
T Consensus 22 ~~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~ 62 (200)
T cd01075 22 GTDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEE 62 (200)
T ss_pred CCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3567899999999995 7999999999999999999988864
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0014 Score=54.52 Aligned_cols=70 Identities=23% Similarity=0.225 Sum_probs=51.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+++++|.|+ |.+|+.+++.|.+.|++|++++|+++... ..+.. ...++ ..+++.+.++++|+||
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~--~~~~~-----G~~~~-----~~~~l~~~l~~aDiVI 215 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA--RITEM-----GLSPF-----HLSELAEEVGKIDIIF 215 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHc-----CCeee-----cHHHHHHHhCCCCEEE
Confidence 356899999997 67999999999999999999999974321 11111 12221 2346677788999999
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
+++
T Consensus 216 ~t~ 218 (296)
T PRK08306 216 NTI 218 (296)
T ss_pred ECC
Confidence 975
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0036 Score=44.83 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=40.8
Q ss_pred EEEEECCCChhHHHHHHHHHHC-CCeEEE-EEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQR-GYTVKA-TVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~-g~~V~~-~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+|.|.||+|.+|..+++.|++. .++++. ++++.+.... +.... .....+.+.. .+. ..++++|+||
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~---~~~----~~~~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKP--LSEVFPHPKGFEDLSVED---ADP----EELSDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSB--HHHTTGGGTTTEEEBEEE---TSG----HHHTTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCe--eehhccccccccceeEee---cch----hHhhcCCEEE
Confidence 5899999999999999999997 456554 4455422221 11111 1112232322 222 3337899999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.+.+
T Consensus 72 ~a~~ 75 (121)
T PF01118_consen 72 LALP 75 (121)
T ss_dssp E-SC
T ss_pred ecCc
Confidence 8863
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0019 Score=53.56 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=48.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcc-hh-hhhhhcCCC-CceEEEEcCCCCcchHHHhhcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK-TE-HLRELDGAT-ERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~-~~-~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+++|+++|.|| ||.+++++..|+..|. +|+++.|+++..+ .+ ..+.+.... ..+.+. +..+.+.+.+.+.++|
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l~~~~~~aD 198 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAFAEALASAD 198 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhhhhhcccCC
Confidence 57789999997 6679999999999996 7999999864211 12 222222111 112221 2222223445567889
Q ss_pred EEEEcc
Q 026852 82 GVFHTA 87 (232)
Q Consensus 82 ~vi~~A 87 (232)
+|||+-
T Consensus 199 ivINaT 204 (288)
T PRK12749 199 ILTNGT 204 (288)
T ss_pred EEEECC
Confidence 999875
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0014 Score=55.68 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=49.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~ 80 (232)
-+++.+||.||+||+|++.++-+...| ++|+.+ ++.++. +..+++.. .+. .|..+++-++...+ ++
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~-~s~e~~--~l~k~lGA----d~v--vdy~~~~~~e~~kk~~~~~~ 226 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTA-CSKEKL--ELVKKLGA----DEV--VDYKDENVVELIKKYTGKGV 226 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEE-cccchH--HHHHHcCC----cEe--ecCCCHHHHHHHHhhcCCCc
Confidence 467899999999999999999999999 555544 444332 33444432 122 34444433333333 58
Q ss_pred CEEEEcccc
Q 026852 81 DGVFHTASP 89 (232)
Q Consensus 81 d~vi~~Ag~ 89 (232)
|+|+.+.|.
T Consensus 227 DvVlD~vg~ 235 (347)
T KOG1198|consen 227 DVVLDCVGG 235 (347)
T ss_pred cEEEECCCC
Confidence 999999974
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0011 Score=54.72 Aligned_cols=76 Identities=14% Similarity=0.005 Sum_probs=49.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++++++|.|+ ||.|++++..|++.|+ +|+++.|+.++.. ...+.+.. ...+.. +...+++...+.++|+||
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~-~La~~~~~-~~~~~~----~~~~~~~~~~~~~~DiVI 195 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLS-RLVDLGVQ-VGVITR----LEGDSGGLAIEKAAEVLV 195 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHHhhh-cCccee----ccchhhhhhcccCCCEEE
Confidence 56789999987 8899999999999997 6999999976442 22222211 111111 111233445567899999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
|+..
T Consensus 196 naTp 199 (282)
T TIGR01809 196 STVP 199 (282)
T ss_pred ECCC
Confidence 8864
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.002 Score=54.11 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
-.+++++|+|++ |+|...++.+...|++|++++|++++.+ ...++. .-+++.. +|.+.++..-+.+|++|.
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e--~a~~lG----Ad~~i~~--~~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLE--LAKKLG----ADHVINS--SDSDALEAVKEIADAIID 235 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHH--HHHHhC----CcEEEEc--CCchhhHHhHhhCcEEEE
Confidence 357899999999 9999999999999999999999997642 233332 2233332 255555555555899999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+++
T Consensus 236 tv~ 238 (339)
T COG1064 236 TVG 238 (339)
T ss_pred CCC
Confidence 975
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.013 Score=48.88 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=74.1
Q ss_pred EECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcC---CCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 13 VTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 13 ItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
|.|+ |.+|..++..|+..+. ++.++++++++.....++.... ...+..+.. .+ .+.++++|+||-.|
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita 72 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA 72 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence 3454 9999999999998874 6999999876554333322111 112222221 22 36778899999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|... .+.....+.++.|......+.+.+.++.....++++|..
T Consensus 73 g~~r-k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP 115 (299)
T TIGR01771 73 GAPQ-KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNP 115 (299)
T ss_pred CCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 8532 123455688999999999999998887555677777765
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.004 Score=52.33 Aligned_cols=79 Identities=20% Similarity=0.155 Sum_probs=49.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--h----hhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--E----HLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
-++|.|.|+ |-||+.++..|+..|++|++.+++++.... . .++.+........-....++-..++.++++++|
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 367888876 779999999999999999999998754321 1 111111110000000012222235667889999
Q ss_pred EEEEcc
Q 026852 82 GVFHTA 87 (232)
Q Consensus 82 ~vi~~A 87 (232)
.||-++
T Consensus 86 lViEav 91 (321)
T PRK07066 86 FIQESA 91 (321)
T ss_pred EEEECC
Confidence 999875
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0021 Score=46.79 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=51.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+++++++.|.+ .|.+++..|.+.|++|+++|.++.. .+..+. ..++.+.+|+.+++- ++-+++|.|.-
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a-----V~~a~~--~~~~~v~dDlf~p~~--~~y~~a~liys 83 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA-----VEKAKK--LGLNAFVDDLFNPNL--EIYKNAKLIYS 83 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH-----HHHHHH--hCCeEEECcCCCCCH--HHHhcCCEEEE
Confidence 45789999998 8889999999999999999999853 222221 246889999987765 55667887763
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0013 Score=56.52 Aligned_cols=36 Identities=25% Similarity=0.458 Sum_probs=31.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~ 43 (232)
.++|.|.||||.+|.++++.|+++ +.+|..+.++.+
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s 74 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK 74 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence 358999999999999999999999 678888887654
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0025 Score=52.56 Aligned_cols=56 Identities=20% Similarity=0.189 Sum_probs=45.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|+++-.|+.++..|+++|+.|+++.|... .+.+.++++|+||
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~----------------------------~L~~~~~~aDIvI 207 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ----------------------------NLPELVKQADIIV 207 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch----------------------------hHHHHhccCCEEE
Confidence 478999999999999999999999999999998876321 1223446789999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
++.|
T Consensus 208 ~AtG 211 (283)
T PRK14192 208 GAVG 211 (283)
T ss_pred EccC
Confidence 8885
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0025 Score=53.22 Aligned_cols=74 Identities=26% Similarity=0.266 Sum_probs=48.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+.+++|+||+|.+|.++++.+...|.+|+++.+++++. +.+..+ .. -..+..+- -.+.+.+. .++|+++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~---~~-~~~~~~~~-~~~~~~~~-~~~d~v~~~ 233 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL--KILKEL---GA-DYVIDGSK-FSEDVKKL-GGADVVIEL 233 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH--HHHHHc---CC-cEEEecHH-HHHHHHhc-cCCCEEEEC
Confidence 457899999999999999999999999999998876432 222221 11 12221111 11222222 268999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+|
T Consensus 234 ~g 235 (332)
T cd08259 234 VG 235 (332)
T ss_pred CC
Confidence 86
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.003 Score=51.99 Aligned_cols=57 Identities=25% Similarity=0.240 Sum_probs=48.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|++.-+|+.++..|.++|+.|+++.+.. ..+.+.++++|+||
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------------KDMASYLKDADVIV 206 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHHhhCCEEE
Confidence 58899999999999999999999999999999886542 13456677899999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
..+|.
T Consensus 207 sAvg~ 211 (286)
T PRK14175 207 SAVGK 211 (286)
T ss_pred ECCCC
Confidence 88874
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0017 Score=55.05 Aligned_cols=68 Identities=22% Similarity=0.315 Sum_probs=42.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCe---EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYT---VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++|+|.||+|++|.++++.|.++++. +..+.++.+.... +. +. .. .....|+.+ ..++++|+||.
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~--l~-~~--g~--~i~v~d~~~-----~~~~~vDvVf~ 69 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE--LS-FK--GK--ELKVEDLTT-----FDFSGVDIALF 69 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe--ee-eC--Cc--eeEEeeCCH-----HHHcCCCEEEE
Confidence 57999999999999999999998774 4666665443221 11 11 11 222234432 12357888887
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
++|
T Consensus 70 A~g 72 (334)
T PRK14874 70 SAG 72 (334)
T ss_pred CCC
Confidence 775
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=49.94 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=33.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
|+|.|.||+|.+|.+++..|++.|++|++.+|++++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA 37 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence 3699999999999999999999999999999987643
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.011 Score=48.04 Aligned_cols=115 Identities=16% Similarity=0.092 Sum_probs=73.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCe---EEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT---VKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~---V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
-++.+|.|.||+||||..+..-|- .... ..+.|......- ...+. .....+ ...+-.++++++++++
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GV---aaDlSHI~T~s~V----~g~~g~~~L~~al~~a 97 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGV---AADLSHINTNSSV----VGFTGADGLENALKGA 97 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcc---cccccccCCCCce----eccCChhHHHHHhcCC
Confidence 456789999999999998876554 3332 333333321110 00111 011122 2233456899999999
Q ss_pred CEEEEccccc--ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 81 DGVFHTASPV--IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 81 d~vi~~Ag~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|+|+--||.- ..++ .++.|++|.-....+..++.+......+.++|-.
T Consensus 98 dvVvIPAGVPRKPGMT---RDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNP 147 (345)
T KOG1494|consen 98 DVVVIPAGVPRKPGMT---RDDLFNINAGIVKTLAAAIAKCCPNALILVISNP 147 (345)
T ss_pred CEEEecCCCCCCCCCc---HHHhhhcchHHHHHHHHHHHhhCccceeEeecCc
Confidence 9999999842 2233 3467899999999999998888666667777654
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0021 Score=53.77 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=31.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++|.|.| .|.+|.+++..|+++|++|++.+|+++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~ 37 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA 37 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence 4699999 8899999999999999999999999753
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0035 Score=55.26 Aligned_cols=73 Identities=14% Similarity=0.072 Sum_probs=51.5
Q ss_pred CCCCcEEEEECC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC
Q 026852 5 EGEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68 (232)
Q Consensus 5 ~~~~~~ilItGa----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (232)
.++||+||||+| ||-+|.++++++..+|++|+++.-.... . ....+..+. +.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---------~-~p~~v~~i~--V~ 320 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL---------A-DPQGVKVIH--VE 320 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC---------C-CCCCceEEE--ec
Confidence 489999999986 7899999999999999999998643221 0 122344443 33
Q ss_pred CcchHHHhhc---CCCEEEEcccc
Q 026852 69 EEGSFDSAVD---GCDGVFHTASP 89 (232)
Q Consensus 69 ~~~~~~~~~~---~~d~vi~~Ag~ 89 (232)
..+++.++++ ..|++|++|++
T Consensus 321 ta~eM~~av~~~~~~Di~I~aAAV 344 (475)
T PRK13982 321 SARQMLAAVEAALPADIAIFAAAV 344 (475)
T ss_pred CHHHHHHHHHhhCCCCEEEEeccc
Confidence 4445444443 36999999985
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0026 Score=52.59 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=48.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++|+++|.|| ||.|++++..|++.|+ +|+++.|+.++.. +..+.+............+ ...+....+++|+||
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~-~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~divI 199 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQ-ALADVINNAVGREAVVGVD---ARGIEDVIAAADGVV 199 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH-HHHHHHhhccCcceEEecC---HhHHHHHHhhcCEEE
Confidence 46789999998 7899999999999997 6889999876443 2222222111110111122 222333456789999
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
|+.
T Consensus 200 NaT 202 (283)
T PRK14027 200 NAT 202 (283)
T ss_pred EcC
Confidence 876
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0063 Score=53.58 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=50.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+.+|+|+|+|++ ++|.++++.|+++|++|++.++++.....+.+++ ....+.++..... ...++++|.||.
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~---~~~gi~~~~g~~~-----~~~~~~~d~vv~ 73 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK---MFDGLVFYTGRLK-----DALDNGFDILAL 73 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh---ccCCcEEEeCCCC-----HHHHhCCCEEEE
Confidence 567899999985 8999999999999999999987765321112221 1123455443322 123457899998
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
..|.
T Consensus 74 spgi 77 (445)
T PRK04308 74 SPGI 77 (445)
T ss_pred CCCC
Confidence 8874
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0086 Score=46.99 Aligned_cols=71 Identities=18% Similarity=0.157 Sum_probs=48.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++|.|| |-+|...++.|++.|++|+++++.... .+..+.. ...+.+.+-+.. ...++++|.||
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~----~l~~l~~-~~~i~~~~~~~~-----~~~l~~adlVi 75 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTE----NLVKLVE-EGKIRWKQKEFE-----PSDIVDAFLVI 75 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCH----HHHHHHh-CCCEEEEecCCC-----hhhcCCceEEE
Confidence 378999999998 779999999999999999998765432 2222221 134555443332 13356788887
Q ss_pred Ec
Q 026852 85 HT 86 (232)
Q Consensus 85 ~~ 86 (232)
-+
T Consensus 76 aa 77 (202)
T PRK06718 76 AA 77 (202)
T ss_pred Ec
Confidence 54
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0041 Score=52.50 Aligned_cols=73 Identities=32% Similarity=0.307 Sum_probs=46.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC---cchHHHhhc--CCCE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE---EGSFDSAVD--GCDG 82 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~--~~d~ 82 (232)
+.++||+||+|++|+..++-+...|+.++++..+.++. +.+.++ .... . .|.++ .+.+.++.. ++|+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~--~~~~~l---GAd~-v--i~y~~~~~~~~v~~~t~g~gvDv 214 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKL--ELLKEL---GADH-V--INYREEDFVEQVRELTGGKGVDV 214 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHH--HHHHhc---CCCE-E--EcCCcccHHHHHHHHcCCCCceE
Confidence 68999999999999999999999997666665555322 222222 1111 1 12222 223434443 5899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
|+...|
T Consensus 215 v~D~vG 220 (326)
T COG0604 215 VLDTVG 220 (326)
T ss_pred EEECCC
Confidence 998865
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.005 Score=51.65 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=33.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++.+++|+||+|++|..+++.+...|.+|+++++++++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~ 175 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK 175 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 56799999999999999999888889999999887653
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0055 Score=52.97 Aligned_cols=37 Identities=30% Similarity=0.208 Sum_probs=34.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+.|+|||||++..+|..+++.|.++|++|++++.++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 3489999999999999999999999999999988864
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0031 Score=55.21 Aligned_cols=72 Identities=21% Similarity=0.265 Sum_probs=51.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+.+++++|.|+ |.+|..+++.|...|. +|++++|++++.. .....+. . ++.+.+++.+.+.++|+|
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~-~la~~~g---~-------~~~~~~~~~~~l~~aDvV 246 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAE-ELAEEFG---G-------EAIPLDELPEALAEADIV 246 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHH-HHHHHcC---C-------cEeeHHHHHHHhccCCEE
Confidence 367789999987 9999999999999997 7999999875432 1122221 1 122335566777889999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.+.+
T Consensus 247 I~aT~ 251 (423)
T PRK00045 247 ISSTG 251 (423)
T ss_pred EECCC
Confidence 98865
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.019 Score=43.36 Aligned_cols=64 Identities=23% Similarity=0.241 Sum_probs=44.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++|-+.|- |-+|+.+++.|+++|++|++.+|++++. +.+.... +.-.++..++++++|+||-+.
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~-----~~~~~~g---------~~~~~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA-----EALAEAG---------AEVADSPAEAAEQADVVILCV 65 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH-----HHHHHTT---------EEEESSHHHHHHHBSEEEE-S
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh-----hhhHHhh---------hhhhhhhhhHhhcccceEeec
Confidence 57888887 7899999999999999999999997533 2222111 112345667777889998764
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0046 Score=51.24 Aligned_cols=57 Identities=21% Similarity=0.173 Sum_probs=47.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+|.|.|.++-+|+.++..|+++|+.|+++.|... ++.++.+++|+||
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------------~l~e~~~~ADIVI 207 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------------DAKALCRQADIVV 207 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------------CHHHHHhcCCEEE
Confidence 578999999999999999999999999999998865532 3445566788888
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-+.|.
T Consensus 208 savg~ 212 (301)
T PRK14194 208 AAVGR 212 (301)
T ss_pred EecCC
Confidence 77763
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0033 Score=55.26 Aligned_cols=66 Identities=26% Similarity=0.446 Sum_probs=46.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
|+|.|.||.|.||.++++.|.+.|++|++.+|+++... +...+. .+.+ ..+..+.++++|+||-+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~-~~a~~~-----gv~~-------~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGK-EVAKEL-----GVEY-------ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHH-HHHHHc-----CCee-------ccCHHHHhccCCEEEEec
Confidence 36999999999999999999999999999999875321 111111 1111 123445667889998776
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0035 Score=52.58 Aligned_cols=71 Identities=23% Similarity=0.233 Sum_probs=50.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+.+++|+|.|+ |.||..+++.|.+.| .+|++++|++++.. ...+++. . ++.+.+++.+.+.++|+||
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~-~la~~~g---~-------~~~~~~~~~~~l~~aDvVi 243 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE-ELAKELG---G-------NAVPLDELLELLNEADVVI 243 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHcC---C-------eEEeHHHHHHHHhcCCEEE
Confidence 57889999998 999999999999876 57889999875322 1122221 1 1223345677788899999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.+.+
T Consensus 244 ~at~ 247 (311)
T cd05213 244 SATG 247 (311)
T ss_pred ECCC
Confidence 8865
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0085 Score=43.70 Aligned_cols=77 Identities=23% Similarity=0.343 Sum_probs=51.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc----------c-------hhh----hhhhcCCCCceEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP----------K-------TEH----LRELDGATERLHLFKA 65 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~----------~-------~~~----~~~~~~~~~~~~~~~~ 65 (232)
+++|+|.|++| +|+++++.|++.|. +++++|.+.-.. . .+. +.+. .+..++..+..
T Consensus 2 ~~~v~iiG~G~-vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-np~~~v~~~~~ 79 (135)
T PF00899_consen 2 NKRVLIIGAGG-VGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEI-NPDVEVEAIPE 79 (135)
T ss_dssp T-EEEEESTSH-HHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHH-STTSEEEEEES
T ss_pred CCEEEEECcCH-HHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHh-cCceeeeeeec
Confidence 46788888755 99999999999998 688877432110 0 011 1112 22456777777
Q ss_pred CCCCcchHHHhhcCCCEEEEcc
Q 026852 66 NLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 66 D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++ +.+...++++++|+||.+.
T Consensus 80 ~~-~~~~~~~~~~~~d~vi~~~ 100 (135)
T PF00899_consen 80 KI-DEENIEELLKDYDIVIDCV 100 (135)
T ss_dssp HC-SHHHHHHHHHTSSEEEEES
T ss_pred cc-ccccccccccCCCEEEEec
Confidence 77 5566778888999999874
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.006 Score=50.48 Aligned_cols=74 Identities=26% Similarity=0.253 Sum_probs=49.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch---HHHhh--cCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAV--DGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~--~~~d 81 (232)
++++++|+|+++++|.++++.+.+.|.+|+++++++++. +.+..+ ... .. .|..+.+. +.... +++|
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~~~~d 215 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGA--ELVRQA---GAD-AV--FNYRAEDLADRILAATAGQGVD 215 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHc---CCC-EE--EeCCCcCHHHHHHHHcCCCceE
Confidence 568999999999999999999999999999998876432 122221 111 11 23333333 33332 2589
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
.+++++|
T Consensus 216 ~vi~~~~ 222 (325)
T cd08253 216 VIIEVLA 222 (325)
T ss_pred EEEECCc
Confidence 9999875
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.011 Score=50.47 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=52.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chh-hhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTE-HLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.|+ ||+|+++++.|+..|. +++++|.+.-.. ..+ ..+.+. +..-+++.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 56678999988 7899999999999996 677777543110 001 111222 2234455666
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+...++++++|+||.+.
T Consensus 105 ~~i~-~~~~~~~~~~~DvVvd~~ 126 (355)
T PRK05597 105 RRLT-WSNALDELRDADVILDGS 126 (355)
T ss_pred eecC-HHHHHHHHhCCCEEEECC
Confidence 6664 345667889999999875
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0047 Score=48.21 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=29.2
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
+...||+|-||.++++.|.+.|++|++..|+..+.
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~ 37 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKA 37 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhH
Confidence 45667788999999999999999999887766543
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0072 Score=43.53 Aligned_cols=73 Identities=19% Similarity=0.316 Sum_probs=44.8
Q ss_pred cEEEEECCCChhHHHHHHHHHH-CCCeEEE-EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQ-RGYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~-~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|.|.|++|.+|+.+++.+.+ .++++.+ ++|+++...-+-..++.... ...+.-.++++++++.+|++|.+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~------~~~~~v~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG------PLGVPVTDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS------T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC------CcccccchhHHHhcccCCEEEEc
Confidence 4799999999999999999999 5787655 45665221111111111100 12222346778888889999987
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
.
T Consensus 75 T 75 (124)
T PF01113_consen 75 T 75 (124)
T ss_dssp S
T ss_pred C
Confidence 4
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0059 Score=49.40 Aligned_cols=80 Identities=21% Similarity=0.175 Sum_probs=52.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chhh-hhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEH-LRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~--~~~~~~~~~~ 64 (232)
+++++|+|.|+ ||+|+++++.|++.|. +++++|.+.-.. ..+. .+.+. ....+++.+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 56678999999 8999999999999996 677776432110 0011 11122 2234455565
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+.+.++++++|+||.+.
T Consensus 109 ~~i~-~~~~~~~~~~~DiVi~~~ 130 (245)
T PRK05690 109 ARLD-DDELAALIAGHDLVLDCT 130 (245)
T ss_pred ccCC-HHHHHHHHhcCCEEEecC
Confidence 5554 445677889999999775
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0052 Score=50.70 Aligned_cols=37 Identities=22% Similarity=0.204 Sum_probs=33.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++++++|+|++|++|..+++.+...|++|++++++.+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~ 175 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEE 175 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 5679999999999999999999999999999888764
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0068 Score=50.69 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=33.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++.+++|+||+|++|..+++.+...|++|+++++++++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~ 180 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDK 180 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 56799999999999999999999999999999887753
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0033 Score=55.85 Aligned_cols=38 Identities=21% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
+++++++|+|+ |++|++++..|.+.|++|++.+|+.++
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~ 367 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAH 367 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 56789999996 799999999999999999999887643
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0067 Score=50.68 Aligned_cols=74 Identities=24% Similarity=0.208 Sum_probs=49.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH---hh--cCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AV--DGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~--~~~d 81 (232)
.++.++|+|+++++|.++++.+...|++|+++++++++. +.+... ... .. .|..+.+.... .. +++|
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~---~~~-~~--~~~~~~~~~~~~~~~~~~~~~d 237 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL--ERAKEL---GAD-YV--IDYRKEDFVREVRELTGKRGVD 237 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHc---CCC-eE--EecCChHHHHHHHHHhCCCCCc
Confidence 567899999999999999999999999999998876432 122221 111 11 24444333222 22 2579
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
.+++++|
T Consensus 238 ~~i~~~g 244 (342)
T cd08266 238 VVVEHVG 244 (342)
T ss_pred EEEECCc
Confidence 9999986
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0091 Score=50.39 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=33.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
.+.+++|+||+|++|..+++.+...|.+|+++++++++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK 188 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 56899999999999999999888889999998888753
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0047 Score=53.94 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=51.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.. ...+.+. . ..+ +.+++.+++.++|+|
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~-~la~~~g---~--~~i-----~~~~l~~~l~~aDvV 244 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAE-DLAKELG---G--EAV-----KFEDLEEYLAEADIV 244 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHcC---C--eEe-----eHHHHHHHHhhCCEE
Confidence 367789999997 999999999999999 78999999875321 1122221 1 111 234667778899999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.+.+
T Consensus 245 i~aT~ 249 (417)
T TIGR01035 245 ISSTG 249 (417)
T ss_pred EECCC
Confidence 98864
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.039 Score=40.56 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=60.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chhhh-hhhc--CCCCceEEEEcCCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEHL-RELD--GATERLHLFKANLL 68 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~~-~~~~--~~~~~~~~~~~D~~ 68 (232)
+|+|.|+ |++|+++++.|++.|. +++++|.+.-.. ..+.+ +.+. ...-++..+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4788997 8899999999999997 688877542110 00111 1111 12344555555554
Q ss_pred CcchHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 69 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+. .....++++|+||.+.. |......+.+.+.+. + ..++..++.
T Consensus 80 ~~-~~~~~~~~~diVi~~~d----------------~~~~~~~l~~~~~~~-~-i~~i~~~~~ 123 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAID----------------NIAVRRALNRACKEL-G-IPVIDAGGL 123 (143)
T ss_pred hh-hHHHHhcCCCEEEECCC----------------CHHHHHHHHHHHHHc-C-CCEEEEcCC
Confidence 33 33677889999997752 112233455666665 3 456666655
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0093 Score=50.79 Aligned_cols=79 Identities=19% Similarity=0.054 Sum_probs=52.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|++.|.|- |.||+++++.|...|++|++.+|+.......... +.. ..+.-+.......+++.++++++|+|+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~L~ell~~aDiVv 231 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLL-IPN--GDVDDLVDEKGGHEDIYEFAGEADIVV 231 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhc-ccc--ccccccccccCcccCHHHHHhhCCEEE
Confidence 478899999998 7799999999999999999998874321110000 000 000100001114568889999999999
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 232 l~l 234 (347)
T PLN02928 232 LCC 234 (347)
T ss_pred ECC
Confidence 876
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0081 Score=50.69 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=31.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~ 44 (232)
.+++|+||+|++|..+++.+...|+ +|+++++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~ 192 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEK 192 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 7899999999999999998888898 79999887653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0038 Score=47.93 Aligned_cols=68 Identities=24% Similarity=0.198 Sum_probs=48.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.++++.|.|. |.||+++++.|..-|++|++.+|+..... ..... .+ ...+++++++++|+|+
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~--~~~~~-----~~--------~~~~l~ell~~aDiv~ 96 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE--GADEF-----GV--------EYVSLDELLAQADIVS 96 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH--HHHHT-----TE--------EESSHHHHHHH-SEEE
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh--hcccc-----cc--------eeeehhhhcchhhhhh
Confidence 478899999976 77999999999999999999999985321 01110 11 3357778888999998
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
....
T Consensus 97 ~~~p 100 (178)
T PF02826_consen 97 LHLP 100 (178)
T ss_dssp E-SS
T ss_pred hhhc
Confidence 8763
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0061 Score=51.84 Aligned_cols=33 Identities=30% Similarity=0.439 Sum_probs=28.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRD 41 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~ 41 (232)
++|.|.||+|.+|..+++.|++. +++++.+.++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 58999999999999999999987 6787776654
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0062 Score=52.47 Aligned_cols=80 Identities=20% Similarity=0.198 Sum_probs=51.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCC-----------------Ccchhh-hhhhcC--CCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN-----------------SPKTEH-LRELDG--ATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~-----------------~~~~~~-~~~~~~--~~~~~~~~~ 64 (232)
+++++|+|.|+ ||+|+++++.|++.|. ++++++++.- +...+. .+.+.. ...++..+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 45678888866 7899999999999997 6888887621 001111 122211 123344454
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+.+..+++++|+||++.
T Consensus 212 ~~~~-~~~~~~~~~~~D~Vv~~~ 233 (376)
T PRK08762 212 ERVT-SDNVEALLQDVDVVVDGA 233 (376)
T ss_pred ccCC-hHHHHHHHhCCCEEEECC
Confidence 4443 345677788999999885
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=43.44 Aligned_cols=58 Identities=29% Similarity=0.224 Sum_probs=47.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
-.++||+++|.|.+.-+|..++..|.++|+.|..+.++.. ++++.++++|+|
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------------~l~~~v~~ADIV 75 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------------QLQSKVHDADVV 75 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------------CHHHHHhhCCEE
Confidence 3588999999999999999999999999999998865431 234566778888
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|...|.
T Consensus 76 vsAtg~ 81 (140)
T cd05212 76 VVGSPK 81 (140)
T ss_pred EEecCC
Confidence 877763
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.012 Score=44.36 Aligned_cols=57 Identities=28% Similarity=0.299 Sum_probs=42.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|.+.-+|+.++..|.++|+.|+.+..+.. .+++..+++|+||
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~----------------------------~l~~~~~~ADIVV 84 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK----------------------------NLQEITRRADIVV 84 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS----------------------------SHHHHHTTSSEEE
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC----------------------------cccceeeeccEEe
Confidence 588999999999999999999999999999988755432 2335556788888
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.+|.
T Consensus 85 sa~G~ 89 (160)
T PF02882_consen 85 SAVGK 89 (160)
T ss_dssp E-SSS
T ss_pred eeecc
Confidence 88774
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0051 Score=50.90 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=57.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-CcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi 84 (232)
-.|+.+-|+|++| +|+--++...+-|++|++++++.++.+ ++++.+.. -.| .|.+ |++.++++.+..|.++
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kke-ea~~~LGA----d~f--v~~~~d~d~~~~~~~~~dg~~ 251 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKE-EAIKSLGA----DVF--VDSTEDPDIMKAIMKTTDGGI 251 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHH-HHHHhcCc----cee--EEecCCHHHHHHHHHhhcCcc
Confidence 4789999999999 998888888888999999999975433 44444422 122 4555 8888888888888888
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
|.+.
T Consensus 252 ~~v~ 255 (360)
T KOG0023|consen 252 DTVS 255 (360)
T ss_pred eeee
Confidence 8874
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0077 Score=49.94 Aligned_cols=55 Identities=20% Similarity=0.195 Sum_probs=45.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE-cCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++||+|.|.|.++.+|..++..|+++|+.|+++. |++ .+.++.+++|+|
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-----------------------------~l~e~~~~ADIV 205 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-----------------------------DLPAVCRRADIL 205 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-----------------------------CHHHHHhcCCEE
Confidence 57899999999999999999999999999999883 443 134556678888
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|-+.|
T Consensus 206 Isavg 210 (296)
T PRK14188 206 VAAVG 210 (296)
T ss_pred EEecC
Confidence 87775
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.013 Score=52.16 Aligned_cols=76 Identities=14% Similarity=0.022 Sum_probs=50.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++++|+|.|+ |++|.++++.|.++|++|+++++++........+.+.. ..+.++..+-.. ...++|.||
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~--~gv~~~~~~~~~------~~~~~D~Vv 83 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA--LGATVRLGPGPT------LPEDTDLVV 83 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH--cCCEEEECCCcc------ccCCCCEEE
Confidence 367789999997 77999999999999999999987653222122222322 234444333221 234689999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
...|.
T Consensus 84 ~s~Gi 88 (480)
T PRK01438 84 TSPGW 88 (480)
T ss_pred ECCCc
Confidence 88874
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0075 Score=52.52 Aligned_cols=39 Identities=33% Similarity=0.196 Sum_probs=35.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
.+.+++++|.|. |.||+.+++.|...|.+|+++++++.+
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r 247 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC 247 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence 358899999997 689999999999999999999998864
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0063 Score=51.52 Aligned_cols=26 Identities=35% Similarity=0.539 Sum_probs=23.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCe
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYT 34 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~ 34 (232)
.+|.|+||||.+|.++++.|.++++.
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP 30 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFP 30 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCC
Confidence 68999999999999999999987764
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0056 Score=54.77 Aligned_cols=74 Identities=22% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+.+++|+|.|+ |.+|..++++|...|+ +|+++.|+.++.. ...+.+. ...+. +...+++..++.++|+||
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~-~La~~~~--g~~i~-----~~~~~dl~~al~~aDVVI 334 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVA-ALREEFP--DVEII-----YKPLDEMLACAAEADVVF 334 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHH-HHHHHhC--CCceE-----eecHhhHHHHHhcCCEEE
Confidence 67899999999 9999999999999996 6999999975432 1112221 11111 223345667788999999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.+.+
T Consensus 335 sAT~ 338 (519)
T PLN00203 335 TSTS 338 (519)
T ss_pred EccC
Confidence 7754
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0094 Score=47.12 Aligned_cols=80 Identities=19% Similarity=0.191 Sum_probs=52.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCC---CCcc-------------hh-hhhhhc--CCCCceEEEEc
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP---NSPK-------------TE-HLRELD--GATERLHLFKA 65 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~---~~~~-------------~~-~~~~~~--~~~~~~~~~~~ 65 (232)
++..+|+|.|+ ||+|+++++.|++.|. +++++|.+. +... .+ ..+.+. ....+++.+..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 45678999996 7899999999999997 488887662 1110 01 111111 22345555665
Q ss_pred CCCCcchHHHhhcCCCEEEEcc
Q 026852 66 NLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 66 D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.+++ +.+.+.++++|+||.+.
T Consensus 105 ~i~~-~~~~~~~~~~DvVI~a~ 125 (212)
T PRK08644 105 KIDE-DNIEELFKDCDIVVEAF 125 (212)
T ss_pred ecCH-HHHHHHHcCCCEEEECC
Confidence 6654 45667888999999773
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.014 Score=45.18 Aligned_cols=77 Identities=18% Similarity=0.083 Sum_probs=53.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~v 83 (232)
.++||+++|.|.|.-+|+-++..|+++|+.|++++.+...... ...+...-.....| ...+.+.++++|+|
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~--------~~~~~~hs~t~~~~~~~~l~~~~~~ADIV 130 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFT--------RGESIRHEKHHVTDEEAMTLDCLSQSDVV 130 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccc--------cccccccccccccchhhHHHHHhhhCCEE
Confidence 5899999999999999999999999999999988765422110 00011111111112 22467788899999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|-.+|.
T Consensus 131 IsAvG~ 136 (197)
T cd01079 131 ITGVPS 136 (197)
T ss_pred EEccCC
Confidence 988874
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.013 Score=46.76 Aligned_cols=106 Identities=21% Similarity=0.162 Sum_probs=65.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+.+++||=.|++|| -+.+-+++.|+.|+++|-+++..+...+..... .-.+.+.+. ..+++...-+++|+|++
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~-gv~i~y~~~---~~edl~~~~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALES-GVNIDYRQA---TVEDLASAGGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhc-cccccchhh---hHHHHHhcCCCccEEEE
Confidence 57789999999999 688899999999999998886443211111111 122223222 33444444357899986
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccc
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~ 132 (232)
+= ... ++--+..+++.|.+..+.+-++++|++.
T Consensus 131 mE-VlE-------------Hv~dp~~~~~~c~~lvkP~G~lf~STin 163 (243)
T COG2227 131 ME-VLE-------------HVPDPESFLRACAKLVKPGGILFLSTIN 163 (243)
T ss_pred hh-HHH-------------ccCCHHHHHHHHHHHcCCCcEEEEeccc
Confidence 62 111 2222334666777765556799999984
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.01 Score=45.43 Aligned_cols=76 Identities=21% Similarity=0.271 Sum_probs=49.7
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCC---CCcc-------------hhh-hhhhc--CCCCceEEEEcCCCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP---NSPK-------------TEH-LRELD--GATERLHLFKANLLE 69 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~---~~~~-------------~~~-~~~~~--~~~~~~~~~~~D~~~ 69 (232)
+|+|.|+ |++|+++++.|++.|. +++++|.+. +... .+. .+.+. ....+++.+...+++
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 3788886 7899999999999998 588888764 1111 011 11111 223445556555543
Q ss_pred cchHHHhhcCCCEEEEcc
Q 026852 70 EGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 70 ~~~~~~~~~~~d~vi~~A 87 (232)
+.+.+.++++|+||.+.
T Consensus 80 -~~~~~~l~~~DlVi~~~ 96 (174)
T cd01487 80 -NNLEGLFGDCDIVVEAF 96 (174)
T ss_pred -hhHHHHhcCCCEEEECC
Confidence 56777889999999773
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.012 Score=48.00 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=45.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEE-EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|.|+|++|.||+.+++.+.+. ++++++ ++++++.... . -+.++...+++.++++++|+||.+
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~-----~---------~~~~i~~~~dl~~ll~~~DvVid~ 67 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG-----Q---------GALGVAITDDLEAVLADADVLIDF 67 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-----c---------CCCCccccCCHHHhccCCCEEEEC
Confidence 47999999999999999988875 677766 4555543211 0 112344455666677778999988
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+.
T Consensus 68 t~ 69 (257)
T PRK00048 68 TT 69 (257)
T ss_pred CC
Confidence 74
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.012 Score=47.03 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=51.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCC-----------------Ccchhh-hhhhcC--CCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN-----------------SPKTEH-LRELDG--ATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~-----------------~~~~~~-~~~~~~--~~~~~~~~~ 64 (232)
+++.+|+|.| .||+|+++++.|++.|. +++++|.+.- +...+. .+.+.. ..-++..+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 5567899998 56799999999999997 5666653321 000011 111211 123456666
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.++ +.+.+.++++++|+||.+.
T Consensus 98 ~~i-~~~~~~~~~~~~DvVi~~~ 119 (228)
T cd00757 98 ERL-DAENAEELIAGYDLVLDCT 119 (228)
T ss_pred cee-CHHHHHHHHhCCCEEEEcC
Confidence 666 3456777888999999875
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.013 Score=50.46 Aligned_cols=66 Identities=20% Similarity=0.324 Sum_probs=52.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++|+|.|++ .+|+.++..+.+.|++|++++.+++..... . .-..+..|..|.+.+.++.+.+|+|.
T Consensus 3 ~~igilG~G-ql~~ml~~aa~~lG~~v~~~d~~~~~pa~~----~-----ad~~~~~~~~D~~~l~~~a~~~dvit 68 (372)
T PRK06019 3 KTIGIIGGG-QLGRMLALAAAPLGYKVIVLDPDPDSPAAQ----V-----ADEVIVADYDDVAALRELAEQCDVIT 68 (372)
T ss_pred CEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCchhH----h-----CceEEecCCCCHHHHHHHHhcCCEEE
Confidence 689999994 899999999999999999999876543211 1 12456678899999999999999774
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.02 Score=45.76 Aligned_cols=76 Identities=21% Similarity=0.314 Sum_probs=49.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC---eEEEEEcC----CCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRD----PNSPK--TEHLRELDGATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~---~V~~~~r~----~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (232)
.+++++++|.|| |+.|++++..|.+.|. +|++++|+ .++.. .+....+...... . ..+ .++.+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~-~--~~~----~~l~~ 93 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP-E--KTG----GTLKE 93 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhcc-C--ccc----CCHHH
Confidence 477889999999 8899999999999997 59999998 33321 0111112111000 0 011 14556
Q ss_pred hhcCCCEEEEccc
Q 026852 76 AVDGCDGVFHTAS 88 (232)
Q Consensus 76 ~~~~~d~vi~~Ag 88 (232)
.++++|+||++.+
T Consensus 94 ~l~~~dvlIgaT~ 106 (226)
T cd05311 94 ALKGADVFIGVSR 106 (226)
T ss_pred HHhcCCEEEeCCC
Confidence 6778999999875
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0085 Score=51.57 Aligned_cols=35 Identities=26% Similarity=0.460 Sum_probs=32.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
.++|.|.||.|.||..+++.|.+.|+.|++.+|++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 36899999999999999999999999999999863
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.051 Score=47.47 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=31.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++|.|.|. |.+|..++..|+++|++|+++++++++
T Consensus 4 ~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~ 38 (415)
T PRK11064 4 ETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA 38 (415)
T ss_pred cEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence 67888865 889999999999999999999998864
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0074 Score=39.01 Aligned_cols=34 Identities=21% Similarity=-0.055 Sum_probs=21.8
Q ss_pred cEEEEECCCChhHHHHHHHHH-HCCCeEEEEEcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDP 42 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~-~~g~~V~~~~r~~ 42 (232)
|++||+|+|+|.|++.--.++ ..|.+.+.++...
T Consensus 40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk 74 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK 74 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence 899999999999999444333 5577887776543
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.014 Score=48.28 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=33.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++.+++|+|++|++|..+++.+...|++|+++.+++++
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 176 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEK 176 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 56799999999999999999999999999998887643
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0079 Score=45.19 Aligned_cols=70 Identities=21% Similarity=0.159 Sum_probs=44.4
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++.+|+++|.| -|.+|+.+++.|...|.+|+++.++|-+ .++... ..+. ...+.++++.+|++
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~----alqA~~---dGf~--------v~~~~~a~~~adi~ 82 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIR----ALQAAM---DGFE--------VMTLEEALRDADIF 82 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHH----HHHHHH---TT-E--------EE-HHHHTTT-SEE
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHH----HHHhhh---cCcE--------ecCHHHHHhhCCEE
Confidence 356789999987 5679999999999999999999998843 222221 1122 22466788889999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|.+.|.
T Consensus 83 vtaTG~ 88 (162)
T PF00670_consen 83 VTATGN 88 (162)
T ss_dssp EE-SSS
T ss_pred EECCCC
Confidence 987764
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.016 Score=50.19 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=53.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
+.|+|+|+|++ ..|..+++.+.+.|++|++++.++...... .. -.++..|..|.+.+.++++ ++|+|+
T Consensus 11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~----~a-----d~~~~~~~~d~~~l~~~~~~~~id~vi 80 (395)
T PRK09288 11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ----VA-----HRSHVIDMLDGDALRAVIEREKPDYIV 80 (395)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH----hh-----hheEECCCCCHHHHHHHHHHhCCCEEE
Confidence 34589999875 689999999999999999999887543211 10 1256678888888888887 789887
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
...
T Consensus 81 ~~~ 83 (395)
T PRK09288 81 PEI 83 (395)
T ss_pred Eee
Confidence 543
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.016 Score=47.70 Aligned_cols=57 Identities=23% Similarity=0.168 Sum_probs=47.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.||+++|.|.+.-+|+.++..|+++|+.|+++.+... .+.+.++++|+||
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~----------------------------~l~~~~~~ADIvi 207 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK----------------------------NLRHHVRNADLLV 207 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC----------------------------CHHHHHhhCCEEE
Confidence 578999999999999999999999999999998865421 2456667789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
..+|.
T Consensus 208 ~avG~ 212 (285)
T PRK10792 208 VAVGK 212 (285)
T ss_pred EcCCC
Confidence 88874
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=49.68 Aligned_cols=27 Identities=30% Similarity=0.578 Sum_probs=23.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVK 36 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~ 36 (232)
+|.|.||+|++|.++++.|.++++.++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~ 27 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPID 27 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChh
Confidence 479999999999999999999887643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0093 Score=49.15 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=46.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++++++|.||+ |.+++++..|++.|. +++++.|+.++.+ +..+.+......+. ..+..+.+... ..|+|||
T Consensus 125 ~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~-~La~~~~~~~~~~~--~~~~~~~~~~~----~~dliIN 196 (283)
T COG0169 125 TGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAE-ELADLFGELGAAVE--AAALADLEGLE----EADLLIN 196 (283)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhcccccc--ccccccccccc----ccCEEEE
Confidence 46889999975 599999999999995 7999999987543 22222222111111 12222222221 5899998
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+-.
T Consensus 197 aTp 199 (283)
T COG0169 197 ATP 199 (283)
T ss_pred CCC
Confidence 874
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.014 Score=48.05 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=50.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chh-hhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTE-HLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.|++ |+|+.+++.|++.|. ++.++|.+.-.. +.+ ..+.+. +...+++.+.
T Consensus 25 L~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 456789999875 599999999999996 677776442111 001 111122 2234566666
Q ss_pred cCCCCcchHHHhhcCCCEEEEc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
..++ .+.+.++++++|+||.+
T Consensus 104 ~~l~-~~n~~~ll~~~DlVvD~ 124 (287)
T PRK08223 104 EGIG-KENADAFLDGVDVYVDG 124 (287)
T ss_pred cccC-ccCHHHHHhCCCEEEEC
Confidence 6665 45677888999999855
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.019 Score=47.62 Aligned_cols=37 Identities=30% Similarity=0.244 Sum_probs=33.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++.+++|+|++|++|..+++.+...|++|+.++++.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~ 180 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE 180 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 4678999999999999999999999999999988764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.032 Score=43.63 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=50.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-------------c------h----hhhhhhcCCCCceE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-------------K------T----EHLRELDGATERLH 61 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-------------~------~----~~~~~~~~~~~~~~ 61 (232)
+++.+|+|.|++| +|.++++.|+..|. +++++|.+.-.. . . +.++++ ++.-+++
T Consensus 17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~ 94 (198)
T cd01485 17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLS 94 (198)
T ss_pred HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEE
Confidence 4557899998877 99999999999996 477776542100 0 0 112222 2234556
Q ss_pred EEEcCCCC-cchHHHhhcCCCEEEEc
Q 026852 62 LFKANLLE-EGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 62 ~~~~D~~~-~~~~~~~~~~~d~vi~~ 86 (232)
.+..++.+ .+...+.++++|+||.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~dvVi~~ 120 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKFTLVIAT 120 (198)
T ss_pred EEecccccchhhHHHHHhCCCEEEEC
Confidence 66666642 44566778899999966
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.024 Score=48.19 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++.+++|+||+|++|..+++.+...|++|+++++++++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k 195 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 195 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence 56799999999999999999888889999988877643
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.022 Score=48.27 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=49.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|+|.|.|- |.||+.+++.|...|++|++.+|++... ..... .+ ...++.++++++|+|+
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~-----~~--------~~~~l~ell~~aDiV~ 209 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE---AEKEL-----GA--------EYRPLEELLRESDFVS 209 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh---hHHHc-----CC--------EecCHHHHHhhCCEEE
Confidence 478999999998 8899999999999999999999876421 11110 01 1245778888999998
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 210 l~l 212 (333)
T PRK13243 210 LHV 212 (333)
T ss_pred EeC
Confidence 776
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.014 Score=48.83 Aligned_cols=76 Identities=22% Similarity=0.249 Sum_probs=50.6
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------ch----hhhhhhcCCCCceEEEEcCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KT----EHLRELDGATERLHLFKANL 67 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~----~~~~~~~~~~~~~~~~~~D~ 67 (232)
+|+|.|+ ||+|.++++.|+..|. ++.++|.+.-.. .. +.+.++ ...-+++.+..++
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-Np~v~V~~~~~~i 78 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-NPNVKIVAYHANI 78 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH-CCCCeEEEEeccC
Confidence 4788887 8899999999999996 577776442110 00 111122 2235567777788
Q ss_pred CCcchHHHhhcCCCEEEEcc
Q 026852 68 LEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 68 ~~~~~~~~~~~~~d~vi~~A 87 (232)
.+.....+.++++|+||.+.
T Consensus 79 ~~~~~~~~f~~~~DvVv~a~ 98 (312)
T cd01489 79 KDPDFNVEFFKQFDLVFNAL 98 (312)
T ss_pred CCccchHHHHhcCCEEEECC
Confidence 76544557788999999774
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.022 Score=48.24 Aligned_cols=73 Identities=22% Similarity=0.238 Sum_probs=46.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh---cCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---DGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d 81 (232)
.++.+++|+|+ |++|...++.+...|. +|+++++++++. +.+.++.. . ..+ |..+ +++.+.. .++|
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~--~~a~~lGa---~-~vi--~~~~-~~~~~~~~~~g~~D 237 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL--SLAREMGA---D-KLV--NPQN-DDLDHYKAEKGYFD 237 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH--HHHHHcCC---c-EEe--cCCc-ccHHHHhccCCCCC
Confidence 35789999986 9999999998888898 688898887543 22333321 1 122 2222 1222222 2479
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|.++|
T Consensus 238 ~vid~~G 244 (343)
T PRK09880 238 VSFEVSG 244 (343)
T ss_pred EEEECCC
Confidence 9999876
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.04 Score=43.31 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=50.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++++++|.||+ -+|..-++.|++.|++|++++.+.. +.+..+.. ..++.+++.+... ..+++++.||
T Consensus 6 ~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~----~~l~~l~~-~~~i~~~~~~~~~-----~dl~~~~lVi 74 (205)
T TIGR01470 6 NLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELE----SELTLLAE-QGGITWLARCFDA-----DILEGAFLVI 74 (205)
T ss_pred EcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCC----HHHHHHHH-cCCEEEEeCCCCH-----HHhCCcEEEE
Confidence 3788999999975 5999999999999999999876654 22333322 2478888877652 2356788777
Q ss_pred Ec
Q 026852 85 HT 86 (232)
Q Consensus 85 ~~ 86 (232)
-+
T Consensus 75 ~a 76 (205)
T TIGR01470 75 AA 76 (205)
T ss_pred EC
Confidence 43
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.014 Score=53.03 Aligned_cols=69 Identities=20% Similarity=0.182 Sum_probs=53.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
.++|.|++. +|+++++.|.++|++|++++.++++ .++... .....+.+|.+|++.++++ ++++|.++-+
T Consensus 419 hiiI~G~G~-~G~~la~~L~~~g~~vvvId~d~~~-----~~~~~~--~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 419 HALLVGYGR-VGSLLGEKLLAAGIPLVVIETSRTR-----VDELRE--RGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CEEEECCCh-HHHHHHHHHHHCCCCEEEEECCHHH-----HHHHHH--CCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 577777654 9999999999999999999998753 222322 3577899999999888876 6788877644
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.011 Score=48.95 Aligned_cols=35 Identities=26% Similarity=0.267 Sum_probs=31.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++|.|.|+ |-+|..++..|++.|++|++.+++++.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 57888886 889999999999999999999998764
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.026 Score=45.38 Aligned_cols=74 Identities=27% Similarity=0.252 Sum_probs=47.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh----hcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA----VDGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~d 81 (232)
.++.+++|+|+++ +|..+++.+...|.+|+++++++++. +.+.... .-.. .|..+.+..... -+++|
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~g----~~~~--~~~~~~~~~~~~~~~~~~~~d 203 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKL--ELAKELG----ADHV--IDYKEEDLEEELRLTGGGGAD 203 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHH--HHHHHhC----Ccee--ccCCcCCHHHHHHHhcCCCCC
Confidence 3567899999999 99999999999999999998876432 2222221 1112 233333322221 24689
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|++++
T Consensus 204 ~vi~~~~ 210 (271)
T cd05188 204 VVIDAVG 210 (271)
T ss_pred EEEECCC
Confidence 9999875
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=45.22 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=49.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------ch----hhhhhhcCCCCceEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KT----EHLRELDGATERLHLF 63 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~----~~~~~~~~~~~~~~~~ 63 (232)
+++.+|+|.|++| +|.++++.|+..|. +++++|.+.-.. .. +.+.++. +.-+++.+
T Consensus 19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lN-p~v~i~~~ 96 (197)
T cd01492 19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALN-PRVKVSVD 96 (197)
T ss_pred HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHC-CCCEEEEE
Confidence 4567899998655 99999999999997 577776442110 00 1122222 23455666
Q ss_pred EcCCCCcchHHHhhcCCCEEEEcc
Q 026852 64 KANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 64 ~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
...++ +...+.++++|+||.+.
T Consensus 97 ~~~~~--~~~~~~~~~~dvVi~~~ 118 (197)
T cd01492 97 TDDIS--EKPEEFFSQFDVVVATE 118 (197)
T ss_pred ecCcc--ccHHHHHhCCCEEEECC
Confidence 66665 23456788999999763
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.025 Score=47.24 Aligned_cols=37 Identities=22% Similarity=0.194 Sum_probs=33.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++.+++|.|++|.+|..+++.+.+.|++|++++++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~ 181 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDE 181 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4678999999999999999999999999999988764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.037 Score=48.28 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=29.4
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
+|.|.| .|.+|..++..|++.|++|+++++++++
T Consensus 2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~ 35 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEK 35 (411)
T ss_pred EEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHH
Confidence 466775 5889999999999999999999998754
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.024 Score=46.72 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=46.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.||+++|.|.+.-+|+-++..|+++|+.|+++..... .+.+..+++|+||
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~----------------------------~l~~~~~~ADIvv 212 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD----------------------------DLKKYTLDADILV 212 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC----------------------------CHHHHHhhCCEEE
Confidence 478999999999999999999999999999988753321 2345667789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
..+|.
T Consensus 213 ~AvG~ 217 (287)
T PRK14176 213 VATGV 217 (287)
T ss_pred EccCC
Confidence 88874
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.044 Score=41.16 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=30.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV 39 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~ 39 (232)
.+++++|+|.||+. +|...++.|++.|++|++++
T Consensus 10 ~l~~~~vlVvGGG~-va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIGGGK-IAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEc
Confidence 37899999999755 99999999999999999884
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0087 Score=49.55 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=32.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
++|.|.|+ |.+|..++..|+++|++|++.+++++..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~ 37 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQL 37 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 46889998 8899999999999999999999998644
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.049 Score=49.95 Aligned_cols=70 Identities=13% Similarity=0.201 Sum_probs=55.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
..++|.| .|.+|+.+++.|.++|+++++++.|++. .+.... .....+.+|.++++.++++ ++++|++|-+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~-----v~~~~~--~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISA-----VNLMRK--YGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHH-----HHHHHh--CCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 4677777 5669999999999999999999999853 333322 2467889999999998887 7788988855
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.031 Score=47.55 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=30.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
.+.+++|+|+ |++|...++.+...|++|++++|+.
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~ 206 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD 206 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC
Confidence 5678999986 9999999988888899999999853
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.015 Score=49.58 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=27.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEE-EcC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRD 41 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~-~r~ 41 (232)
++|.|.||||++|..+++.|.+. +.+++.+ +++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccc
Confidence 37999999999999999999987 6677743 443
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.015 Score=48.25 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=32.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
++|.|.|+ |.+|..++..|+..|++|++.+++++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 47888887 7899999999999999999999998754
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.021 Score=47.98 Aligned_cols=35 Identities=31% Similarity=0.392 Sum_probs=30.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++|.|.|+ |.+|..++..|++.|++|.+++|+++.
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~ 36 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQ 36 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 36888886 889999999999999999999998643
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.027 Score=47.49 Aligned_cols=74 Identities=20% Similarity=0.154 Sum_probs=48.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC--cchHHHhhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~--~~ 80 (232)
..+.+++|+|+ |++|..+++.+...|++ |+++++++++. +.+.++.. -.. .|..+ .+.+.++.. ++
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~--~~~~~~ga----~~~--i~~~~~~~~~~~~~~~~~~~ 232 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL--ELAKALGA----DFV--INSGQDDVQEIRELTSGAGA 232 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHhCC----CEE--EcCCcchHHHHHHHhCCCCC
Confidence 35779999986 89999999999899998 99888876542 22232211 112 22222 334444443 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.+.|
T Consensus 233 d~vid~~g 240 (339)
T cd08239 233 DVAIECSG 240 (339)
T ss_pred CEEEECCC
Confidence 99998875
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.023 Score=49.04 Aligned_cols=68 Identities=22% Similarity=0.228 Sum_probs=49.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|++.|.| .|.||+.+++.|...|++|++.+|+....+ .... ..+.-.+++.++++++|+|+
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~--~~~~------------~g~~~~~~l~ell~~sDvV~ 260 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPE--LEKE------------TGAKFEEDLDAMLPKCDVVV 260 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchh--hHhh------------cCceecCCHHHHHhhCCEEE
Confidence 47899999999 577999999999999999999988753211 1111 11112346778888999998
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 261 l~l 263 (386)
T PLN03139 261 INT 263 (386)
T ss_pred EeC
Confidence 775
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.032 Score=46.44 Aligned_cols=76 Identities=17% Similarity=0.120 Sum_probs=49.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCC-CCcchHHHhhc--CCCEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-LEEGSFDSAVD--GCDGV 83 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~--~~d~v 83 (232)
++.+++|.|++|.+|..+++.+...|++|+++.++.++. +.+..+ .. -+++..+- .-.+.+.++.. ++|.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~--~~~~~~---g~-~~~~~~~~~~~~~~i~~~~~~~~~d~v 212 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGV--AELRAL---GI-GPVVSTEQPGWQDKVREAAGGAPISVA 212 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHH--HHHHhc---CC-CEEEcCCCchHHHHHHHHhCCCCCcEE
Confidence 467899999999999999999999999999988876532 222222 11 12222211 11223444443 58999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
+.+.|
T Consensus 213 ~d~~g 217 (324)
T cd08292 213 LDSVG 217 (324)
T ss_pred EECCC
Confidence 98875
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.03 Score=46.13 Aligned_cols=56 Identities=23% Similarity=0.190 Sum_probs=46.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|.+.-+|+.++..|.++|+.|+++.+.. ..+.+.++++|+||
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------------~~l~~~~~~ADIVV 206 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------------RDLAAHTRQADIVV 206 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------------CCHHHHhhhCCEEE
Confidence 47899999999999999999999999999998764321 13446677889999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
-.+|
T Consensus 207 ~avG 210 (285)
T PRK14189 207 AAVG 210 (285)
T ss_pred EcCC
Confidence 8887
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.024 Score=48.32 Aligned_cols=35 Identities=29% Similarity=0.405 Sum_probs=29.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~ 43 (232)
++|.|+||+|++|.++++.|++... +++++.++.+
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~ 39 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLANHPWFEVTALAASER 39 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence 6899999999999999999998754 7877755543
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.026 Score=46.45 Aligned_cols=57 Identities=25% Similarity=0.244 Sum_probs=46.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.||+|.|.|.|+-+|+.++..|+++|+.|+++ .+.. ..+.+..+++|+||
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s~t---------------------------~~l~~~~~~ADIVI 206 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HSRT---------------------------RNLAEVARKADILV 206 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CCCC---------------------------CCHHHHHhhCCEEE
Confidence 4789999999999999999999999999999887 1111 03456677899999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-+.|.
T Consensus 207 ~avg~ 211 (284)
T PRK14179 207 VAIGR 211 (284)
T ss_pred EecCc
Confidence 88874
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.04 Score=45.85 Aligned_cols=74 Identities=26% Similarity=0.284 Sum_probs=48.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d 81 (232)
.+..++|+|++|.+|..+++.+...|++|+.+++++++. +.+.++ ... ..+ |..+.+ .+..... ++|
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~--~~~~~~---g~~-~~~--~~~~~~~~~~~~~~~~~~~~d 213 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKT--ALVRAL---GAD-VAV--DYTRPDWPDQVREALGGGGVT 213 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc---CCC-EEE--ecCCccHHHHHHHHcCCCCce
Confidence 457899999999999999999999999999998877532 222222 111 122 222222 2333333 589
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
.++++.|
T Consensus 214 ~vl~~~g 220 (324)
T cd08244 214 VVLDGVG 220 (324)
T ss_pred EEEECCC
Confidence 9998865
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.023 Score=48.99 Aligned_cols=68 Identities=26% Similarity=0.210 Sum_probs=49.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|+|.|.|. |.||+.+++.|...|++|++.+|+..... .... .++.-..+++++++++|+|+
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~--~~~~------------~g~~~~~~l~ell~~aDvV~ 253 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEE--VEQE------------LGLTYHVSFDSLVSVCDVVT 253 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchh--hHhh------------cCceecCCHHHHhhcCCEEE
Confidence 378899999998 56999999999999999999998763211 1111 11222346788889999998
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 254 l~l 256 (385)
T PRK07574 254 IHC 256 (385)
T ss_pred EcC
Confidence 775
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.031 Score=48.07 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=51.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~A 87 (232)
+|+|.|+ |..|..+++.+.+.|++|++++.++..... .+. -..+..|..|.+.+.++.+ ++|+|+...
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~----~~a-----d~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM----QVA-----HRSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchh----hhC-----ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 4899995 778999999999999999999998754321 111 1345678889999988887 799888553
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.075 Score=45.22 Aligned_cols=26 Identities=23% Similarity=0.464 Sum_probs=23.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY 33 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~ 33 (232)
..+|.|.||+|++|.++++.|.++++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~h 32 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDF 32 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCC
Confidence 46899999999999999999999877
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.039 Score=44.48 Aligned_cols=80 Identities=15% Similarity=0.116 Sum_probs=50.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcc-----------------hh-hhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK-----------------TE-HLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~-----------------~~-~~~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.|++ |+|+.+++.|++.|. +++++|.+.-... .+ ..+.+. +...+++.+.
T Consensus 22 L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 556788998875 699999999999995 6777775432110 01 111121 2233444544
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..+ +.+.+.++++++|+||.+.
T Consensus 101 ~~i-~~~~~~~~~~~~DlVvd~~ 122 (240)
T TIGR02355 101 AKL-DDAELAALIAEHDIVVDCT 122 (240)
T ss_pred ccC-CHHHHHHHhhcCCEEEEcC
Confidence 444 3456777889999999775
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.058 Score=46.11 Aligned_cols=74 Identities=20% Similarity=0.202 Sum_probs=48.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+++++|.|+ |++|..+++.+...|.+|++++.+.++.. ...+++. . -+.+ |..+.+.+.+...++|++|.+
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~-~~~~~~G---a-~~vi--~~~~~~~~~~~~~~~D~vid~ 254 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKED-EAINRLG---A-DSFL--VSTDPEKMKAAIGTMDYIIDT 254 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhh-hHHHhCC---C-cEEE--cCCCHHHHHhhcCCCCEEEEC
Confidence 5678999775 89999999998889999988877765322 1222221 1 1121 223334555555568999988
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
.|
T Consensus 255 ~g 256 (360)
T PLN02586 255 VS 256 (360)
T ss_pred CC
Confidence 75
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.035 Score=46.32 Aligned_cols=37 Identities=38% Similarity=0.488 Sum_probs=33.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
+.+++|.|++|.+|..+++.+.+.|.+|+++++++++
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~ 183 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADA 183 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHH
Confidence 5689999999999999999999999999999888754
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.0056 Score=47.34 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=25.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|-|. |.|++|..++..|++.|++|++++.+++
T Consensus 1 M~I~Vi-GlGyvGl~~A~~lA~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVI-GLGYVGLPLAAALAEKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred CEEEEE-CCCcchHHHHHHHHhCCCEEEEEeCChH
Confidence 356566 7899999999999999999999998875
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.038 Score=45.59 Aligned_cols=38 Identities=29% Similarity=0.221 Sum_probs=33.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++..++|+|++|.+|..++..+...|++|+.+++++++
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~ 176 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK 176 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence 56799999999999999999999999999999887643
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.0075 Score=45.29 Aligned_cols=74 Identities=19% Similarity=0.244 Sum_probs=44.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC---CCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
||.|.||+. .|.+++..|.++|++|.+..|+++..+ .+.+-.. ....+. +.-.+.=..+++++++++|+||-.
T Consensus 1 KI~ViGaG~-~G~AlA~~la~~g~~V~l~~~~~~~~~--~i~~~~~n~~~~~~~~-l~~~i~~t~dl~~a~~~ad~Iiia 76 (157)
T PF01210_consen 1 KIAVIGAGN-WGTALAALLADNGHEVTLWGRDEEQIE--EINETRQNPKYLPGIK-LPENIKATTDLEEALEDADIIIIA 76 (157)
T ss_dssp EEEEESSSH-HHHHHHHHHHHCTEEEEEETSCHHHHH--HHHHHTSETTTSTTSB-EETTEEEESSHHHHHTT-SEEEE-
T ss_pred CEEEECcCH-HHHHHHHHHHHcCCEEEEEeccHHHHH--HHHHhCCCCCCCCCcc-cCcccccccCHHHHhCcccEEEec
Confidence 477777654 899999999999999999999874221 1111110 011111 111222235667788999999855
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
.
T Consensus 77 v 77 (157)
T PF01210_consen 77 V 77 (157)
T ss_dssp S
T ss_pred c
Confidence 3
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.13 Score=42.97 Aligned_cols=60 Identities=8% Similarity=-0.009 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 19 FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 19 ~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+-|+++++.|+++|++|++.+|+++....+..+.+...+ .. -.++..++.+++|+||-+.
T Consensus 30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaG--A~-------~AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAG--VK-------VVSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCC--Ce-------ecCCHHHHHhCCCEEEEec
Confidence 458999999999999999999987543222222222211 11 1235667888899999775
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.032 Score=49.16 Aligned_cols=39 Identities=28% Similarity=0.112 Sum_probs=34.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
.+.+|+++|.|.+ .||+.+++.|...|++|+++++++..
T Consensus 251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~ 289 (476)
T PTZ00075 251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC 289 (476)
T ss_pred CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 4789999999977 59999999999999999999888754
|
|
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.035 Score=44.37 Aligned_cols=36 Identities=25% Similarity=0.241 Sum_probs=30.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~ 41 (232)
.++++++.|.| .|.+|+++++.|.+.|.+|+.+..+
T Consensus 28 ~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 28 GLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47788999998 6999999999999999999965443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.039 Score=45.47 Aligned_cols=57 Identities=25% Similarity=0.177 Sum_probs=46.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|.+..+|+.++..|+++|+.|+++.... ..+.+.++++|+||
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t----------------------------~~l~~~~~~ADIvV 205 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT----------------------------KDLSFYTQNADIVC 205 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc----------------------------HHHHHHHHhCCEEE
Confidence 47899999999999999999999999999998773221 12345677889999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.+|.
T Consensus 206 ~AvG~ 210 (285)
T PRK14191 206 VGVGK 210 (285)
T ss_pred EecCC
Confidence 88764
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.068 Score=46.34 Aligned_cols=80 Identities=16% Similarity=0.056 Sum_probs=50.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chhh-hhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEH-LRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.|++ |+|.++++.|+..|. +++++|.+.-.. +.+. .+.+. +..-++..+.
T Consensus 40 L~~~~VlviG~G-GlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 118 (392)
T PRK07878 40 LKNARVLVIGAG-GLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE 118 (392)
T ss_pred HhcCCEEEECCC-HHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence 356789999875 599999999999996 577776432100 0011 11122 2223455556
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+...++++++|+||.+.
T Consensus 119 ~~i~-~~~~~~~~~~~D~Vvd~~ 140 (392)
T PRK07878 119 FRLD-PSNAVELFSQYDLILDGT 140 (392)
T ss_pred ccCC-hhHHHHHHhcCCEEEECC
Confidence 6664 345667888999999764
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.046 Score=44.99 Aligned_cols=57 Identities=25% Similarity=0.218 Sum_probs=45.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|.|.-+|+-++..|.++|+.|+++.+... .+.+..+++|+||
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~----------------------------dl~~~~k~ADIvI 206 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT----------------------------DLKSHTTKADILI 206 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC----------------------------CHHHHhhhcCEEE
Confidence 578999999999999999999999999999987754331 2233456789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.+|.
T Consensus 207 sAvGk 211 (282)
T PRK14180 207 VAVGK 211 (282)
T ss_pred EccCC
Confidence 88874
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.045 Score=44.93 Aligned_cols=57 Identities=23% Similarity=0.228 Sum_probs=46.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|.|.-+|+-++..|+++|+.|+.+.+... .+.+..+++|+||
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~----------------------------~l~~~~~~ADIvI 206 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK----------------------------NLKEVCKKADILV 206 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC----------------------------CHHHHHhhCCEEE
Confidence 578999999999999999999999999999987753321 2345566789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.+|.
T Consensus 207 sAvGk 211 (278)
T PRK14172 207 VAIGR 211 (278)
T ss_pred EcCCC
Confidence 88874
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.072 Score=45.87 Aligned_cols=74 Identities=22% Similarity=0.221 Sum_probs=48.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+.+++|.|+ |++|..+++.+...|.+|++++++.++.. +.++++. . -+.+ |..+.+.+.+...++|++|.+
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~-~~a~~lG---a-~~~i--~~~~~~~v~~~~~~~D~vid~ 249 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKER-EAIDRLG---A-DSFL--VTTDSQKMKEAVGTMDFIIDT 249 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhH-HHHHhCC---C-cEEE--cCcCHHHHHHhhCCCcEEEEC
Confidence 4678999986 89999999999999999998887754311 2222221 1 1121 233334555555568999988
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
.|
T Consensus 250 ~G 251 (375)
T PLN02178 250 VS 251 (375)
T ss_pred CC
Confidence 75
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.088 Score=44.37 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=47.9
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.||++-|.|- |.||+++++.+..-|++|...+|++. .+. .++. ...+ .+ +.++++++|+|
T Consensus 142 ~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~--~~~~-----~~~y-------~~-l~ell~~sDii 204 (324)
T COG1052 142 FDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEA--EKEL-----GARY-------VD-LDELLAESDII 204 (324)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHH--Hhhc-----Ccee-------cc-HHHHHHhCCEE
Confidence 3578999999986 55999999999977899999999875 211 1111 1112 12 77888899988
Q ss_pred EEcc
Q 026852 84 FHTA 87 (232)
Q Consensus 84 i~~A 87 (232)
+..+
T Consensus 205 ~l~~ 208 (324)
T COG1052 205 SLHC 208 (324)
T ss_pred EEeC
Confidence 7665
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.049 Score=46.42 Aligned_cols=73 Identities=22% Similarity=0.202 Sum_probs=47.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc---chHHHhhc--CC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE---GSFDSAVD--GC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~ 80 (232)
.+.+++|.|+ |++|...++.+...|.+ |+++++++++. +.++++.. -+++ |..+. +.+.++.. ++
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~--~~~~~~Ga----~~~i--~~~~~~~~~~i~~~~~~~g~ 246 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKL--EWAREFGA----THTV--NSSGTDPVEAIRALTGGFGA 246 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHcCC----ceEE--cCCCcCHHHHHHHHhCCCCC
Confidence 5678999985 99999999988888985 88888877543 22232211 1222 22222 23444433 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.+.|
T Consensus 247 d~vid~~g 254 (358)
T TIGR03451 247 DVVIDAVG 254 (358)
T ss_pred CEEEECCC
Confidence 99998876
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.047 Score=47.14 Aligned_cols=82 Identities=10% Similarity=0.004 Sum_probs=49.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHH-HCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+.+|++.|.|. |.||+++++.+. .-|++|++.++.........................++...++++++++++|+|
T Consensus 162 ~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV 240 (386)
T PLN02306 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI 240 (386)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence 478899999986 559999999986 669999999887642111000011000000000011222235788999999988
Q ss_pred EEcc
Q 026852 84 FHTA 87 (232)
Q Consensus 84 i~~A 87 (232)
+..+
T Consensus 241 ~lh~ 244 (386)
T PLN02306 241 SLHP 244 (386)
T ss_pred EEeC
Confidence 7665
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.062 Score=50.04 Aligned_cols=79 Identities=20% Similarity=0.223 Sum_probs=55.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCc----------------chh-hhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSP----------------KTE-HLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~----------------~~~-~~~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.|+ | +|+.++.+|++.|- +++++|.+.-.. +.+ ..+.+. +..-+++.+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 56678999999 5 99999999999993 788877542111 001 111111 2245677777
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+.+.++++++|+||.+.
T Consensus 183 ~~i~-~~n~~~~l~~~DlVvD~~ 204 (722)
T PRK07877 183 DGLT-EDNVDAFLDGLDVVVEEC 204 (722)
T ss_pred ccCC-HHHHHHHhcCCCEEEECC
Confidence 7776 678889999999999874
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.048 Score=46.89 Aligned_cols=80 Identities=19% Similarity=0.166 Sum_probs=51.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc---c--------------hh-hhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP---K--------------TE-HLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~---~--------------~~-~~~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.|++ |+|.++++.|++.|. +++++|.+.-.. . .+ ..+.+. ...-+++.+.
T Consensus 39 l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 456789999875 699999999999996 788887652100 0 01 111121 1234455665
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+.+.++++++|+||.+.
T Consensus 118 ~~i~-~~~~~~~~~~~DlVid~~ 139 (370)
T PRK05600 118 ERLT-AENAVELLNGVDLVLDGS 139 (370)
T ss_pred eecC-HHHHHHHHhCCCEEEECC
Confidence 5564 445677889999999775
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.046 Score=45.80 Aligned_cols=73 Identities=25% Similarity=0.326 Sum_probs=51.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEE-----cCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK-----ANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|.||++ -|.+++..|++.|++|.+..|+++- .+++.....+.++++ .++.-..++.++++++|+|
T Consensus 2 ~kI~ViGaGs-wGTALA~~la~ng~~V~lw~r~~~~-----~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i 75 (329)
T COG0240 2 MKIAVIGAGS-WGTALAKVLARNGHEVRLWGRDEEI-----VAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII 75 (329)
T ss_pred ceEEEEcCCh-HHHHHHHHHHhcCCeeEEEecCHHH-----HHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence 4688888866 7999999999999999999999853 222332223344443 3334455688888889988
Q ss_pred EEcc
Q 026852 84 FHTA 87 (232)
Q Consensus 84 i~~A 87 (232)
+-..
T Consensus 76 v~av 79 (329)
T COG0240 76 VIAV 79 (329)
T ss_pred EEEC
Confidence 7554
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.035 Score=51.36 Aligned_cols=80 Identities=20% Similarity=0.222 Sum_probs=53.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCC------C-----------cchhhh-hhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN------S-----------PKTEHL-RELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~------~-----------~~~~~~-~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.| .||+|++++..|++.|. +++++|.+.- . .+.+.. +.+. +...+++.+.
T Consensus 41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 5667899999 56799999999999996 5666653211 0 000111 1111 2245677777
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++ .+.+..+++++|+||.+.
T Consensus 120 ~~i~-~~n~~~~l~~~DvVid~~ 141 (679)
T PRK14851 120 AGIN-ADNMDAFLDGVDVVLDGL 141 (679)
T ss_pred cCCC-hHHHHHHHhCCCEEEECC
Confidence 7775 556788899999999664
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.051 Score=44.73 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=46.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.||+++|.|.|.-+|+-++..|+++|+.|+.+..... .+.+..+++|+||
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~----------------------------~l~~~~~~ADIvI 207 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQ----------------------------NLPSIVRQADIIV 207 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC----------------------------CHHHHHhhCCEEE
Confidence 578999999999999999999999999999987753321 2335566789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.+|.
T Consensus 208 sAvGk 212 (284)
T PRK14177 208 GAVGK 212 (284)
T ss_pred EeCCC
Confidence 88874
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.053 Score=43.02 Aligned_cols=81 Identities=21% Similarity=0.047 Sum_probs=47.9
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE-cCCC----Ccch-hhhhhhcCCCCceEEE-EcCCCCcchHHHh
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPN----SPKT-EHLRELDGATERLHLF-KANLLEEGSFDSA 76 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~-r~~~----~~~~-~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~ 76 (232)
..+++++++|.|- |.+|+++++.|.+.|..|+.++ .+.. .... +.++.... ...+..+ ..|..+.+++...
T Consensus 19 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 96 (217)
T cd05211 19 DSLEGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVA-LGGSARVKVQDYFPGEAILGL 96 (217)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHh-hCCccccCcccccCcccceec
Confidence 4578899999995 8899999999999998766554 3320 1111 11211111 1112221 2334444555433
Q ss_pred hcCCCEEEEccc
Q 026852 77 VDGCDGVFHTAS 88 (232)
Q Consensus 77 ~~~~d~vi~~Ag 88 (232)
+||++|-+|.
T Consensus 97 --~~DVlipaA~ 106 (217)
T cd05211 97 --DVDIFAPCAL 106 (217)
T ss_pred --cccEEeeccc
Confidence 6899999984
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.052 Score=44.80 Aligned_cols=57 Identities=23% Similarity=0.205 Sum_probs=45.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|.|.-+|+-++..|+++++.|+++.+... .+.+..+++|+||
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~----------------------------~l~~~~~~ADIvI 203 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ----------------------------DLPAVTRRADVLV 203 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC----------------------------CHHHHHhhCCEEE
Confidence 578999999999999999999999999999987743321 1345566789998
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.+|.
T Consensus 204 sAvGk 208 (287)
T PRK14173 204 VAVGR 208 (287)
T ss_pred EecCC
Confidence 88874
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.091 Score=45.52 Aligned_cols=80 Identities=15% Similarity=0.071 Sum_probs=51.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------ch-hhhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KT-EHLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~-~~~~~~~--~~~~~~~~~~ 64 (232)
++..+|+|.|++ |+|.++++.|+..|. +++++|.+.-.. +. ...+.+. +..-+++.+.
T Consensus 36 L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 455689999875 599999999999996 577666432100 00 0111122 2234566666
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++. +...++++++|+||.+.
T Consensus 115 ~~~~~-~~~~~~~~~~D~Vvd~~ 136 (390)
T PRK07411 115 TRLSS-ENALDILAPYDVVVDGT 136 (390)
T ss_pred cccCH-HhHHHHHhCCCEEEECC
Confidence 66653 45667888999999875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 232 | ||||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 3e-50 | ||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 7e-45 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 9e-35 | ||
| 1y1p_A | 342 | X-Ray Structure Of Aldehyde Reductase With Nadph Le | 5e-24 | ||
| 1ujm_A | 342 | Crystal Structure Of Aldehyde Reductase 2 From Spor | 1e-22 | ||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-06 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-06 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 4e-06 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 8e-06 | ||
| 1wvg_A | 359 | Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal | 2e-05 | ||
| 3dhn_A | 227 | Crystal Structure Of The Putative Epimerase Q89z24_ | 8e-05 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 1e-04 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 2e-04 |
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342 | Back alignment and structure |
|
| >pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342 | Back alignment and structure |
|
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359 | Back alignment and structure |
|
| >pdb|3DHN|A Chain A, Crystal Structure Of The Putative Epimerase Q89z24_bactn From Bacteroides Thetaiotaomicron. Northeast Structural Genomics Consortium Target Btr310 Length = 227 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 344 bits (885), Expect = e-120
Identities = 99/221 (44%), Positives = 140/221 (63%), Gaps = 9/221 (4%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERL 60
M + + VCVTGASGF+ SWLV LL+RGYTV+ATVRDP + K +HL +L A L
Sbjct: 1 MGSQS--ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHL 58
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
L+KA+L +EGSFD A+ GC GVFH A+P+ F S +P+ +++ P + G L +++SCA
Sbjct: 59 TLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK 118
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE---WYSLAKTLAEEAAW 177
+++R+V TSS G + + E V DE+ +S+ C+ K Y ++KTLAE+AAW
Sbjct: 119 TVRRLVFTSSAGTVNIQE---HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAW 175
Query: 178 KFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
K+AKEN ID + I P V+GPF + L+ I GN
Sbjct: 176 KYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 335 bits (862), Expect = e-117
Identities = 92/220 (41%), Positives = 136/220 (61%), Gaps = 6/220 (2%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLH 61
+K CV G +GFVAS LVKLLLQ+GY V TVRDP++ K HL EL L
Sbjct: 4 QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQEL-GDLK 62
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS 121
+F+A+L +E SF++ + GCD VFH A+PV F S++P+ D++ PA+ G +NV+++C + S
Sbjct: 63 IFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKS 122
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE---WYSLAKTLAEEAAWK 178
+KRV+LTSS A+ +N+ +V+DE +++ K Y +KTLAE+AAWK
Sbjct: 123 VKRVILTSSAAAVTINQLD-GTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWK 181
Query: 179 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
FA+EN IDL+ + P + G + + ++LI GN
Sbjct: 182 FAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGN 221
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 331 bits (850), Expect = e-115
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 8/215 (3%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP--NSPKTEHLRELDGATERLHLFKAN 66
VCVTG +GF+ SW++K LL+ GY+V T+R L L GA+E+LH F A+
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
L SF +A++GC G+FHTASP+ F P+ + V G L +L++C ++KR +
Sbjct: 62 LSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFI 121
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW---YSLAKTLAEEAAWKFAKEN 183
TSS A+ N V+DE+ +S+ L + K + Y+++KTLAE+A +F ++N
Sbjct: 122 YTSSGSAVSFNG---KDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN 178
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN 218
GID+V + ++G F P L E L L+ G
Sbjct: 179 GIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK 213
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 6e-98
Identities = 78/232 (33%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERL 60
+ E +V VTGA+GFVAS +V+ LL+ GY V+ T R + +
Sbjct: 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFE 64
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
++L++G++D + G GV H AS V F N ++V PA+ GTLN LR+ A
Sbjct: 65 TAVVEDMLKQGAYDEVIKGAAGVAHIASVVSF--SNKYDEVVTPAIGGTLNALRAAAATP 122
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS---------NPVLCKENKEW-YSLAKT 170
S+KR VLTSS + L P + +DE ++ P + W Y+ +KT
Sbjct: 123 SVKRFVLTSSTVSA-LIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKT 181
Query: 171 LAEEAAWKFAKENG--IDLVAIHPGTVIGPFFQPILNFG--AEVILNLINGN 218
AE AAWKF EN L A+ P IG F P G + +++L NG
Sbjct: 182 EAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGE 233
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 184 bits (468), Expect = 1e-58
Identities = 47/190 (24%), Positives = 73/190 (38%), Gaps = 26/190 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + + GASGFV S L+ L RG+ V A VR P K E+ E L + KA++
Sbjct: 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--------EHLKVKKADVS 56
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
G D V +P +NP DI D + L ++ K + R ++
Sbjct: 57 SLDEVCEVCKGADAVISAFNPG---WNNP--DIYDETIKVYLTIIDGVKK-AGVNRFLMV 110
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
G++ + P + + ++ + + K L E KE ID V
Sbjct: 111 GGAGSL-----FIAPGLRLMDS-------GEVPENILPGVKALGEFYLNFLMKEKEIDWV 158
Query: 189 AIHPGTVIGP 198
P + P
Sbjct: 159 FFSPAADMRP 168
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 6e-58
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 16/188 (8%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V GA+G + + + G+ + R + + + L L+ A +L+
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS--QIQRLAYLE-----PECRVAEMLDH 68
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
+ A+ G DGV +A Q + V A+ T +C + + R++ S
Sbjct: 69 AGLERALRGLDGVIFSAGYYPSRPRRWQ-EEVASALGQTNPFYAACLQ-ARVPRILYVGS 126
Query: 131 IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAI 190
AM + E F + + ++ Y L K +E A + A+ G+ +V
Sbjct: 127 AYAM----PRHPQGLPGHEGLFYDSLPSGKS--SYVLCKWALDEQAREQARN-GLPVVIG 179
Query: 191 HPGTVIGP 198
PG V+G
Sbjct: 180 IPGMVLGE 187
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 8e-27
Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 24/190 (12%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + VTGA+G + + + L ++ P LD A + +L
Sbjct: 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSP----------LDPAGPNEECVQCDLA 53
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + ++ V GCDG+ H + + P I+ ++G N+ A+ H R+V
Sbjct: 54 DANAVNAMVAGCDGIVHLGGISV---EKPFEQILQGNIIGLYNLYE-AARAHGQPRIVFA 109
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
SS + + + P Y ++K E A + + G +
Sbjct: 110 SSNHTIGYYP----QTERLGPDVPARPDGL------YGVSKCFGENLARMYFDKFGQETA 159
Query: 189 AIHPGTVIGP 198
+ G+
Sbjct: 160 LVRIGSCTPE 169
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 8e-26
Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 30/198 (15%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M++ +++ VTGA+G V S + L + V+ + H
Sbjct: 1 MLN-----RLL-VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEE--------- 45
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
+ +L + + V CDG+ H + + P DI+ ++G N+ A+
Sbjct: 46 -IVACDLADAQAVHDLVKDCDGIIHLGGVSV---ERPWNDILQANIIGAYNLYE-AARNL 100
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
R+V SS + ID P Y L+K E+ A +
Sbjct: 101 GKPRIVFASSNHTIGYYPR----TTRIDTEVPRRPD------SLYGLSKCFGEDLASLYY 150
Query: 181 KENGIDLVAIHPGTVIGP 198
+ I+ + I G+
Sbjct: 151 HKFDIETLNIRIGSCFPK 168
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 4e-23
Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 36/188 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-LE 69
+ + G++G V L+K L Y + A R E + + + ++
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV-----EQVPQYNNVK----AVHFDVDWT 53
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
+ G D + + + S VD + G + ++++ K +KR +L S
Sbjct: 54 PEEMAKQLHGMDAIINVSG-----SGGKSLLKVD--LYGAVKLMQAAEK-AEVKRFILLS 105
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
+I + + + Y +AK A+ KE +D
Sbjct: 106 TIFS-----LQPEKWIGAGFDALKD----------YYIAKHFADLYL---TKETNLDYTI 147
Query: 190 IHPGTVIG 197
I PG +
Sbjct: 148 IQPGALTE 155
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 2e-21
Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 36/183 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GA+G + +Q GY V VRD L H+ ++L+
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-----SRLPSEGPR--PAHVVVGDVLQA 58
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
D V G D V ++ V G N++ K H + +VV +S
Sbjct: 59 ADVDKTVAGQDAVIVLLGT----RNDLSPTTVMSE--GARNIVA-AMKAHGVDKVVACTS 111
Query: 131 IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAI 190
L + P + + + + +E+G+ VA+
Sbjct: 112 AFL--LWDPTKVPPRL----------------QAVTDDHIRMHKV----LRESGLKYVAV 149
Query: 191 HPG 193
P
Sbjct: 150 MPP 152
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 8e-21
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V V GA+G VA +L+ L +G+ A VR+ + LRE GA++ + ANL E
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNEE--QGPELRER-GASD---IVVANLEE- 76
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
F A D V A + + ++D + G + ++ K IKR ++ SS
Sbjct: 77 -DFSHAFASIDAVVFAAG-SGPHTGADKTILID--LWGAIKTIQEAEK-RGIKRFIMVSS 131
Query: 131 IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAI 190
+G +P N Y +AK LA++ K + +D +
Sbjct: 132 VGT-------------------VDPDQGPMNMRHYLVAKRLADDE----LKRSSLDYTIV 168
Query: 191 HPGTVIG 197
PG +
Sbjct: 169 RPGPLSN 175
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 1e-19
Identities = 21/188 (11%), Positives = 61/188 (32%), Gaps = 29/188 (15%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GA+G S +++ RG+ V A VR+ + + +++ + ++ +
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK--------ITQTHKDINILQKDIFDL 54
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
S + + V D + V +++ R+++
Sbjct: 55 TL--SDLSDQNVVVDAYGIS--------PDEAEKHVTSLDHLIS-VLNGTVSPRLLVVGG 103
Query: 131 IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAI 190
++ + + +++ +Y A+ A++ + + I
Sbjct: 104 AASL---QIDEDGNTLLESKGLREA-------PYYPTARAQAKQLEHLKSHQAEFSWTYI 153
Query: 191 HPGTVIGP 198
P + P
Sbjct: 154 SPSAMFEP 161
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 7e-19
Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 31/231 (13%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
++ VTG+SG + + LV L ++ D T + ++
Sbjct: 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD----------TGGIKFITLDVSN 50
Query: 70 EGSFDSAVD--GCDGVFHTASPVIFLS-DNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
D AV+ D +FH A + +P + GT N+L AK H +++VV
Sbjct: 51 RDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALA-YKVNMNGTYNILE-AAKQHRVEKVV 108
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
+ S+IG P TP + + P + + + K AE + ++ G+D
Sbjct: 109 IPSTIGVF----GPETPKNKVPSITITRP------RTMFGVTKIAAELLGQYYYEKFGLD 158
Query: 187 LVAIHPGTVIGPFFQP---ILNFGAEVILNLING---NIYSAAIQDRIMIY 231
+ ++ +I +P ++ E+ + Y A + M+Y
Sbjct: 159 VRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMY 209
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 9e-19
Identities = 37/234 (15%), Positives = 64/234 (27%), Gaps = 55/234 (23%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGA 56
M + + +TG +GF+ L + L+ G V T E
Sbjct: 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVL 60
Query: 57 TERLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA-----VMGTLN 111
LEE + V+H AS + P V +
Sbjct: 61 E----------LEER----DLSDVRLVYHLASHK-----SVPRSFKQPLDYLDNVDSGRH 101
Query: 112 VLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV-IDETWFSNPVLCKENKEWYSLAKT 170
+L + +VV+ S+ E D + E +P Y+ +K
Sbjct: 102 LLA-LCTSVGVPKVVVGST------CEVYGQADTLPTPEDSPLSPRSP------YAASKV 148
Query: 171 LAEEAAWKFAKENGIDLVAI-----------HPGTVIGPFFQPILNFGAEVILN 213
E A + + V I P ++ +L E+ +
Sbjct: 149 GLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLT-RNELPVE 201
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-18
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 16/197 (8%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK 64
E + +TGA GF+AS + + L G+ V D EH+ E E
Sbjct: 26 PSENLKISITGAGGFIASHIARRLKHEGHYV--IASDWKKN--EHMTEDMFCDE---FHL 78
Query: 65 ANLLEEGSFDSAVDGCDGVFHTA---SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS 121
+L + +G D VF+ A + F+ N + I+ M + N++ A+++
Sbjct: 79 VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNH-SVIMYNNTMISFNMIE-AARING 136
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
IKR SS + + V + + P E ++ + L K EE + K
Sbjct: 137 IKRFFYASSA-CIYPEFKQLETTNVSLKESDAWPA---EPQDAFGLEKLATEELCKHYNK 192
Query: 182 ENGIDLVAIHPGTVIGP 198
+ GI+ + GP
Sbjct: 193 DFGIECRIGRFHNIYGP 209
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 2e-18
Identities = 45/211 (21%), Positives = 77/211 (36%), Gaps = 26/211 (12%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M + + V V G +GFV S LVK LL+ G + V D + + +
Sbjct: 25 MNASKLANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLL--SAEKINVPDH-PAV 80
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLR 114
+ ++ ++ S D D VFH A+ Q+ I DP + TL +
Sbjct: 81 RFSETSITDDALLASLQDEYDYVFHLATYH-----GNQSSIHDPLADHENNTLTTLKLYE 135
Query: 115 SCAKVHSIKRVVLTSS---IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTL 171
+K+VV +++ I ++ T + D N YS++K
Sbjct: 136 RLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEET--DIVSLHNNDSP------YSMSKIF 187
Query: 172 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202
E + + K++ + V V GP
Sbjct: 188 GEFYSVYYHKQHQLPTVRARFQNVYGPGEIL 218
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 6e-18
Identities = 41/208 (19%), Positives = 70/208 (33%), Gaps = 50/208 (24%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
V VTGASG + K L + + K VR + ++ G + +F +
Sbjct: 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----QGKEKIGGEAD---VFIGD 56
Query: 67 LLEEGSFDSAVDGCDGVFHTAS----------------PVIFLSDNPQADIVDPAVMGTL 110
+ + S + A G D + S P D + VD +G
Sbjct: 57 ITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVD--WIGQK 114
Query: 111 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKT 170
N + AKV +K +V+ S+G PD +++ N + K
Sbjct: 115 NQID-AAKVAGVKHIVVVGSMGG-------TNPDHPLNKLGNGN----------ILVWKR 156
Query: 171 LAEEAAWKFAKENGIDLVAIHPGTVIGP 198
AE+ ++G I G ++
Sbjct: 157 KAEQY----LADSGTPYTIIRAGGLLDK 180
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-17
Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 37/217 (17%)
Query: 1 MMSG--------EGEEKVVCVTGASGFVASWLVKLLLQRGYTVK-----ATVRDPNSPKT 47
MMS + KV +TG +GF+ S L++ LL+ V AT N +
Sbjct: 12 MMSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV 71
Query: 48 EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA-SPVIFLS-DNPQADIVDPA 105
L + ++ ++A G D V H A + S ++P
Sbjct: 72 RSLVSEKQW-SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSN-ATN 129
Query: 106 VMGTLNVLRSCAKVHSIKRVVLTSS---IGAMLLNETPMTPDVVIDETWFSNPV-LCKEN 161
+ G LN+L + ++ +S G P + E P+
Sbjct: 130 IDGFLNMLIAARD-AKVQSFTYAASSSTYG--------DHPGLPKVEDTIGKPLSP---- 176
Query: 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198
Y++ K + E A F++ G + + V G
Sbjct: 177 ---YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGR 210
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 3e-17
Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 18/143 (12%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
M+ + +K + V GA+G + L+++ G+ V+A V E L+ + T
Sbjct: 1 MAQQ--KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT---- 54
Query: 62 LFKANLL-EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
LF+ LL D+ +G F N + D +G ++ + +
Sbjct: 55 LFQGPLLNNVPLMDTLFEGAHLAFI----------NTTSQAGDEIAIGK-DLADAAKRAG 103
Query: 121 SIKRVVLTSSIGAMLLNETPMTP 143
+I+ + +S L P P
Sbjct: 104 TIQHYIYSSMPDHSLYGPWPAVP 126
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 76.7 bits (188), Expect = 1e-16
Identities = 28/208 (13%), Positives = 57/208 (27%), Gaps = 27/208 (12%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGY-----TVKATVRDPNSPKTEHLRELDGATERLHLF 63
V + G +G + + L ++L V R E ++
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHED--------NPINYV 53
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSC-AKVHSI 122
+ ++ + + + V H + + NVL + ++
Sbjct: 54 QCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTE-QENCEANSKMFRNVLDAVIPNCPNL 112
Query: 123 KRVVLTSSI----GAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 178
K + L + G + D E P L N L + +
Sbjct: 113 KHISLQTGRKHYMGPFESYGKIESHDPPYTEDL---PRLKYMN-----FYYDLEDIMLEE 164
Query: 179 FAKENGIDLVAIHPGTVIGPFFQPILNF 206
K+ G+ PG + G ++N
Sbjct: 165 VEKKEGLTWSVHRPGNIFGFSPYSMMNL 192
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 2e-16
Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 38/194 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ ++V+ + G T + K + E + L +L+
Sbjct: 5 IAVTGGTGFLGQYVVESIKNDGNTPII-LTRSIGNKAINDYEYRVSDYTL----EDLIN- 58
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLRSCAKVHSIKR 124
++ D V H A+ + T N+ ++I
Sbjct: 59 -----QLNDVDAVVHLAA---------TRGSQGKISEFHDNEILTQNLYD-ACYENNISN 103
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
+V S+ ++ P +E P L Y ++K E ++++ G
Sbjct: 104 IVYAST--ISAYSDETSLP---WNEKELPLPDLM------YGVSKLACEHIGNIYSRKKG 152
Query: 185 IDLVAIHPGTVIGP 198
+ + + + G
Sbjct: 153 LCIKNLRFAHLYGF 166
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 74.3 bits (182), Expect = 2e-16
Identities = 29/192 (15%), Positives = 49/192 (25%), Gaps = 34/192 (17%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ V GA+G S +V +RG+ V A VRDP + + GAT
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP-----QKAADRLGATVAT----LVKEPL 53
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
++ +D D V S + L S + V + S
Sbjct: 54 VLTEADLDSVDAVVDALSV----PWGSGRGYLHLDFATH---LVSLLRNSDTLAVFILGS 106
Query: 131 IGAML----LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
+ P+ + W+ ++
Sbjct: 107 ASLAMPGADHPMILDFPESAASQPWYD--------------GALYQYYEYQFLQMNANVN 152
Query: 187 LVAIHPGTVIGP 198
+ I P
Sbjct: 153 WIGISPSEAFPS 164
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 5e-16
Identities = 25/188 (13%), Positives = 55/188 (29%), Gaps = 39/188 (20%)
Query: 11 VCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
V + GA G +A ++ L + R P + + + ++L
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQP-----AKIHKPYPT--NSQIIMGDVLN 78
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
+ A+ G D V+ + + + +V+ + K +KR++
Sbjct: 79 HAALKQAMQGQDIVYANLTG-------------EDLDIQANSVIAA-MKACDVKRLIFVL 124
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
S+G DE A +A + +G++
Sbjct: 125 SLGIY-------------DEVPGKFVEWNNAVIGEPLKPFRRAADA----IEASGLEYTI 167
Query: 190 IHPGTVIG 197
+ P +
Sbjct: 168 LRPAWLTD 175
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 74.6 bits (183), Expect = 9e-16
Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 35/220 (15%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV------RDPNSPKTEHLREL------ 53
E + V +TGA+GF+ +LV LL+R V + + L +
Sbjct: 71 PELRTVLLTGATGFLGRYLVLELLRRL-DVDGRLICLVRAESDEDAR-RRLEKTFDSGDP 128
Query: 54 -------DGATERLHLFKANL------LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQAD 100
+ A +RL + + L++ + + D + +A+ V P +
Sbjct: 129 ELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHE 185
Query: 101 IVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGA-MLLNETPMTPDVVIDETWFSNPVLCK 159
+ P V GT ++R +K S+ + + T D I + V
Sbjct: 186 LFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGG 244
Query: 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIH-PGTVIGP 198
Y +K E + + VA+ G ++
Sbjct: 245 WAGG-YGTSKWAGEVLLREANDLCALP-VAVFRCGMILAD 282
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-15
Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 31/194 (15%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
V +TG G + S + +LLL+RG V D + + EHL++ T + ++ +
Sbjct: 24 VFITGICGQIGSHIAELLLERGDKV--VGIDNFATGRREHLKDHPNLT----FVEGSIAD 77
Query: 70 EGSFDSAVDGC--DGVFHTASPVIFLSDNPQADIVDPA---VMGTLNVLRSCAKVHSIKR 124
+ + D V HTA+ +P D + +G NV+++ K +++ R
Sbjct: 78 HALVNQLIGDLQPDAVVHTAA----SYKDP-DDWYNDTLTNCVGGSNVVQAAKK-NNVGR 131
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
V + + P + NP Y+++K+ E + + +G
Sbjct: 132 FVYFQTALCYGVKPIQQ-P---VRLDHPRNPANSS-----YAISKSANE----DYLEYSG 178
Query: 185 IDLVAIHPGTVIGP 198
+D V V+GP
Sbjct: 179 LDFVTFRLANVVGP 192
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-15
Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 29/203 (14%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVK-----ATVRDPNSPKTEHLRELDGATERLH 61
K +TG +GF+ S L++ LL+ V +T N + + L + R
Sbjct: 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQW-SRFC 82
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPV-IFLS-DNPQADIVDPAVMGTLNVLRSCAKV 119
+ ++ + + + + G D V H A+ + S +P + G LN+L +
Sbjct: 83 FIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTN-ATNITGFLNILHAAKN- 140
Query: 120 HSIKRVVL--TSSI-GAMLLNETPMTPDVVIDETWFSNPV-LCKENKEWYSLAKTLAEEA 175
++ +SS G P + E NP+ Y++ K + E
Sbjct: 141 AQVQSFTYAASSSTYGD--------HPALPKVEENIGNPLSP-------YAVTKYVNEIY 185
Query: 176 AWKFAKENGIDLVAIHPGTVIGP 198
A +A+ G + + V G
Sbjct: 186 AQVYARTYGFKTIGLRYFNVFGR 208
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 3e-15
Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 18/134 (13%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATER 59
M+ +K+V V G +G + + LL+ G + V+ R+P + LR GA
Sbjct: 2 MVD----KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQ-GAE-- 54
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
+ + + ++ + A++G F +++ ++ + V + A+
Sbjct: 55 --VVQGDQDDQVIMELALNGAYATF-------IVTNYWESCSQEQEVKQGKLLADL-ARR 104
Query: 120 HSIKRVVLTSSIGA 133
+ VV +
Sbjct: 105 LGLHYVVYSGLENI 118
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 4e-15
Identities = 42/231 (18%), Positives = 75/231 (32%), Gaps = 43/231 (18%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLF 63
G + K V + G +GF+ L K +L+ D + + L + ER+H F
Sbjct: 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWE-VFGMDMQTDRLGDLVKH----ERMHFF 74
Query: 64 KANL-LEEGSFDSAVDGCDGVFHTASP--VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
+ ++ + + + V CD + + P + + L ++RS K
Sbjct: 75 EGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQP-LRVFELDFEANLPIVRSAVKYG 133
Query: 121 SIKRVVLTSS---IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW---------YSLA 168
K +V S+ G M D D + Y+ +
Sbjct: 134 --KHLVFPSTSEVYG--------MCADEQFDPD--------ASALTYGPINKPRWIYACS 175
Query: 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE---VILNLIN 216
K L + W + E G++ P IGP I V+ +
Sbjct: 176 KQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG 225
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-14
Identities = 46/217 (21%), Positives = 76/217 (35%), Gaps = 28/217 (12%)
Query: 11 VCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-L 68
V + G +GF+ + L + LL+ Y V D S H + ++ +
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEV--YGLDIGSDAISRFLN----HPHFHFVEGDISI 56
Query: 69 EEGSFDSAVDGCDGVFHTASP--VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ V CD V + I + NP + + L ++R C K KR++
Sbjct: 57 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR--KRII 113
Query: 127 L--TSSI-GAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-YSLAKTLAEEAAWKFAKE 182
TS + G M D DE + V W YS++K L + W + ++
Sbjct: 114 FPSTSEVYG--------MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 165
Query: 183 NGIDLVAIHPGTVIGPFFQPILNFGAE---VILNLIN 216
G+ P +GP + I LI
Sbjct: 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL 202
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 1e-14
Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 40/214 (18%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV L++ GY V V D S + ++ L +L +
Sbjct: 3 IVVTGGAGFIGSHLVDKLVELGYEV--VVVDNLS--SGRREFVN---PSAELHVRDLKDY 55
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLRSCAKVHSIKR 124
D VFH A+ + +P V+ T NVL A+ ++
Sbjct: 56 SWGAGI--KGDVVFHFAANP-----EVRLSTTEPIVHFNENVVATFNVLE-WARQTGVRT 107
Query: 125 VVLTSSI---GAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
VV SS G + + P E P+ Y AK E +A+
Sbjct: 108 VVFASSSTVYG-----DADVIP---TPEEEPYKPISV------YGAAKAAGEVMCATYAR 153
Query: 182 ENGIDLVAIHPGTVIGPFFQP--ILNFGAEVILN 213
G+ +A+ V+GP + I +F ++ N
Sbjct: 154 LFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRN 187
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 67.4 bits (164), Expect = 8e-14
Identities = 31/189 (16%), Positives = 60/189 (31%), Gaps = 37/189 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
+ + GA+G +A L LL + R + + + ER+ + + +
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID----HERVTVIEGSFQN 63
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
G + AV + VF A S + A IV +I+RV+ S
Sbjct: 64 PGXLEQAVTNAEVVFVGAME----SGSDMASIVK------------ALSRXNIRRVIGVS 107
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
G L E P+ + + + Y + A +E+ ++
Sbjct: 108 MAG--LSGEFPVALEKWTFDNLPIS----------YVQGERQARNV----LRESNLNYTI 151
Query: 190 IHPGTVIGP 198
+ +
Sbjct: 152 LRLTWLYND 160
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 3e-13
Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 34/197 (17%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
++ VTG +GF+ S +V L + + V D S + + ++ E L KA+L
Sbjct: 2 SLIVVTGGAGFIGSHVVDKLSE-SNEI--VVIDNLS--SGNEEFVN---EAARLVKADLA 53
Query: 69 EEGSFDSAVDGCDGVFHTA-SPVIFLSDNPQADIVDPA------VMGTLNVLRSCAKVHS 121
+ + G + V+H A +P + + +P V+ T +L + K
Sbjct: 54 AD-DIKDYLKGAEEVWHIAANPDVRIG------AENPDEIYRNNVLATYRLLEAMRK-AG 105
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
+ R+V TS+ + + E + P E + ++P+ + Y +K E +
Sbjct: 106 VSRIVFTST--STVYGEAKVIP---TPEDYPTHPI----SL--YGASKLACEALIESYCH 154
Query: 182 ENGIDLVAIHPGTVIGP 198
+ VIG
Sbjct: 155 TFDMQAWIYRFANVIGR 171
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 1e-12
Identities = 36/198 (18%), Positives = 58/198 (29%), Gaps = 66/198 (33%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ +TGA GFV L L H+ E+ +E
Sbjct: 3 IVITGAKGFVGKNLKADLTSTTD--------------HHIFEVH-----------RQTKE 37
Query: 71 GSFDSAVDGCDGVFHTA------SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
+SA+ D + H A F N V +VL +
Sbjct: 38 EELESALLKADFIVHLAGVNRPEHDKEFSLGN---------VSYLDHVLDILTRNTKKPA 88
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
++L+SSI A T P Y +K E+ ++A+E G
Sbjct: 89 ILLSSSIQA-----TQDNP---------------------YGESKLQGEQLLREYAEEYG 122
Query: 185 IDLVAIHPGTVIGPFFQP 202
+ + G + +P
Sbjct: 123 NTVYIYRWPNLFGKWCKP 140
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-12
Identities = 37/207 (17%), Positives = 63/207 (30%), Gaps = 32/207 (15%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATER 59
M + + GA G + + L + L + G D T+ +
Sbjct: 1 MN------PKILIIGACGQIGTELTQKLRKLYGTENVIAS-DIRKLNTDVV-------NS 46
Query: 60 LHLFKANLLEEGSFDSAVD--GCDGVFHTAS-PVIFLSDNPQADIVDPAVMGTLNVLRSC 116
N L+ + V+ ++ A+ NP D + +VL +
Sbjct: 47 GPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAW-DLNMNSLFHVL-NL 104
Query: 117 AKVHSIKRVVLTSSIGAMLLNE-TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEA 175
AK IK++ SSI TP I P Y ++K E
Sbjct: 105 AKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIM-----EPS------TVYGISKQAGERW 153
Query: 176 AWKFAKENGIDLVAIHPGTVIGPFFQP 202
+ G+D+ +I +I P
Sbjct: 154 CEYYHNIYGVDVRSIRYPGLISWSTPP 180
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 62.5 bits (153), Expect = 8e-12
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 32/197 (16%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTG +GF+ S +V+ LL RG V V D + T + + + F+ +L ++
Sbjct: 3 VLVTGGAGFIGSHIVEDLLARGLEV--AVLDNLA--TGKRENVP---KGVPFFRVDLRDK 55
Query: 71 GSFDSAVDGC--DGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLRSCAKVHSI 122
+ A V H A+ + + + DP ++G LN+L +C + + +
Sbjct: 56 EGVERAFREFRPTHVSHQAA----QASVKVS-VEDPVLDFEVNLLGGLNLLEACRQ-YGV 109
Query: 123 KRVVLTSSIGAMLLNETPMTPDVV-IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
+++V S+ GA+ P+ +ETW P + Y+ +K E + +
Sbjct: 110 EKLVFASTGGAIYGE----VPEGERAEETWPPRPK----SP--YAASKAAFEHYLSVYGQ 159
Query: 182 ENGIDLVAIHPGTVIGP 198
G+ V++ G V GP
Sbjct: 160 SYGLKWVSLRYGNVYGP 176
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-11
Identities = 42/207 (20%), Positives = 73/207 (35%), Gaps = 44/207 (21%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATERLHLFKA 65
+ + GA+G V L + L++ G T+ D P+ G + + A
Sbjct: 17 IAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----AGFSGAVDARAA 71
Query: 66 NLLEEGSFDSAVD-GCDGVFHTASPVIFLSDNPQADIVDPA------VMGTLNVLRSC-- 116
+L G + V+ D +FH A+ +S +A +D + GT + +
Sbjct: 72 DLSAPGEAEKLVEARPDVIFHLAA---IVS--GEA-ELDFDKGYRINLDGTRYLFDAIRI 125
Query: 117 --AKVHSIKRVVLTSSI---GAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTL 171
K RVV TSSI GA I + + + P+ Y K +
Sbjct: 126 ANGKDGYKPRVVFTSSIAVFGA--------PLPYPIPDEFHTTPLTS------YGTQKAI 171
Query: 172 AEEAAWKFAKENGIDLVAIHPGTVIGP 198
E +++ D + I T+
Sbjct: 172 CELLLSDYSRRGFFDGIGIRLPTICIR 198
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-11
Identities = 27/190 (14%), Positives = 51/190 (26%), Gaps = 37/190 (19%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + G G + L + L +G+ V R + A++
Sbjct: 6 ILIAGC-GDLGLELARRLTAQGHEVTGLRRSA-----------QPMPAGVQTLIADVTRP 53
Query: 71 GSFDSAVDG-CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
+ S V + + + + S+ V G N L + + ++ V S
Sbjct: 54 DTLASIVHLRPEILVYCVAA----SEYSDEHYRLSYVEGLRNTLSA-LEGAPLQHVFFVS 108
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE-EAAWKFAKENGIDLV 188
S G + +DE K + E EA
Sbjct: 109 STGVY-----GQEVEEWLDEDTPPIAK--------DFSGKRMLEAEALLA-----AYSST 150
Query: 189 AIHPGTVIGP 198
+ + GP
Sbjct: 151 ILRFSGIYGP 160
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-10
Identities = 38/198 (19%), Positives = 66/198 (33%), Gaps = 28/198 (14%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
E +++ VTG +GF+ S +VK L +G T V D N L ++ K +
Sbjct: 45 EGRMIIVTGGAGFIGSNIVKALNDKGIT-DILVVD-NLKDGTKFVNLVDLNIADYMDKED 102
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA----VMGTLNVLRSCAKVHSI 122
L + + +FH + S + D + +L C + I
Sbjct: 103 FLIQIMAGEEFGDVEAIFHEGA----CSSTTEWD-GKYMMDNNYQYSKELLHYCLE-REI 156
Query: 123 KRVVLTSS--IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
+ +S+ G I+ + P N + +K L +E +
Sbjct: 157 PFLYASSAATYG--------GRTSDFIESREYEKP----LNV--FGYSKFLFDEYVRQIL 202
Query: 181 KENGIDLVAIHPGTVIGP 198
E +V V GP
Sbjct: 203 PEANSQIVGFRYFNVYGP 220
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-10
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 30/190 (15%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATER 59
E + K + +TG +GFV S L L+ G+ V T R N EH E
Sbjct: 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWI----GHEN 76
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASP--VIFLSDNPQADIVDPAVMGTLNVLRSCA 117
L +++E + D ++H ASP NP + +GTLN+L
Sbjct: 77 FELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNP-IKTLKTNTIGTLNMLGLAK 130
Query: 118 KVHSIKRVVLTSSIGAMLLNETPMTPDVVI-DETWFSNPVLCKENKEWYSLAKTLAEEAA 176
+V R++L S+ +E P+V E ++ + V + Y K +AE
Sbjct: 131 RVG--ARLLLAST------SEVYGDPEVHPQSEDYWGH-VNPIGPRACYDEGKRVAETMC 181
Query: 177 WKFAKENGID 186
+ + K+ G++
Sbjct: 182 YAYMKQEGVE 191
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 38/194 (19%), Positives = 64/194 (32%), Gaps = 28/194 (14%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S +VK L +G T V D N L ++ K + L +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGIT-DILVVD-NLKDGTKFVNLVDLNIADYMDKEDFLIQ 59
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA----VMGTLNVLRSCAKVHSIKRVV 126
+ +FH + S + D + +L C + I +
Sbjct: 60 IMAGEEFGDVEAIFHEGA----CSSTTEWD-GKYMMDNNYQYSKELLHYCLE-REIPFLY 113
Query: 127 LTSS--IGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
+S+ G I+ + P+ N Y +K L +E + E
Sbjct: 114 ASSAATYG--------GRTSDFIESREYEKPL----NV--YGYSKFLFDEYVRQILPEAN 159
Query: 185 IDLVAIHPGTVIGP 198
+V V GP
Sbjct: 160 SQIVGFRYFNVYGP 173
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-10
Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 35/247 (14%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLH 61
V + G +GF+ + L + LL+ Y V D S H
Sbjct: 310 CTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLN----HPHFH 363
Query: 62 LFKANLLEEGS-FDSAVDGCDGVFH---TASPVIFLSDNPQADIVDPAVMGTLNVLRSCA 117
+ ++ + V CD V A+P+ + NP + + L ++R C
Sbjct: 364 FVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTR-NP-LRVFELDFEENLRIIRYCV 421
Query: 118 KVHSIKRVVLTSSIGAMLLNET-PMTPDVVIDETWFSNPVLCKENKE-W-YSLAKTLAEE 174
K KR++ S+ +E M D DE SN ++ NK W YS++K L +
Sbjct: 422 KYR--KRIIFPST------SEVYGMCSDKYFDED-HSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 175 AAWKFAKENGIDLVAIHPGTVIGP----FFQPILNFG---AEVILNLING---NIYSAAI 224
W + ++ G+ P +GP + ++ILNL+ G +
Sbjct: 473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 532
Query: 225 QDRIMIY 231
Q R
Sbjct: 533 QKRCFTD 539
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-10
Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 18/133 (13%)
Query: 13 VTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG 71
+TGA+G + + + + VR+ K + R + + +
Sbjct: 5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVE--KVPDDWR-GKVSVR----QLDYFNQE 57
Query: 72 SFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131
S A G D V F+ + N++ + AK + ++
Sbjct: 58 SMVEAFKGMDTVV-------FIP--SIIHPSFKRIPEVENLVYA-AKQSGVAHIIFIGYY 107
Query: 132 GAMLLNETPMTPD 144
N M+P
Sbjct: 108 ADQHNNPFHMSPY 120
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 5e-10
Identities = 29/135 (21%), Positives = 44/135 (32%), Gaps = 17/135 (12%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATE 58
M + K V + GASG L+K +L++G V R + + A +
Sbjct: 16 MQN-----KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-------EEAYK 63
Query: 59 RLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAK 118
++ + + + SA G D F + VD L K
Sbjct: 64 NVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVD--RDYVLKSAELA-K 120
Query: 119 VHSIKRVVLTSSIGA 133
K L SS GA
Sbjct: 121 AGGCKHFNLLSSKGA 135
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 7e-10
Identities = 45/258 (17%), Positives = 81/258 (31%), Gaps = 46/258 (17%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVK-----ATVRDPNSPKTEHLRELDGATERLHLFKANL 67
V G G+ L ++ Y V + E L + +R+ +KA
Sbjct: 16 VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 75
Query: 68 LEEGSFDSAVDGCD-----GVFHTASP--VIFLSDNPQAD--IVDPA---------VMGT 109
+ D CD F + P V+ + A ++D + V+GT
Sbjct: 76 GKSIEL-YVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGT 134
Query: 110 LNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE------ 163
LNVL + + +V ++G TP++ I+E + + + +
Sbjct: 135 LNVLFAIKEFGEECHLVKLGTMGEYG------TPNIDIEEGYITITHNGRTDTLPYPKQA 188
Query: 164 --WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVIL--------N 213
+Y L+K K GI ++ G V G
Sbjct: 189 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 248
Query: 214 LINGNIYSAAIQDRIMIY 231
+N AA+ + +Y
Sbjct: 249 ALNRFCVQAAVGHPLTVY 266
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-09
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 13 VTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+TGA+G + ++++ L++ + A VR+P K + L G T R +A+ +E
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPA--KAQALAA-QGITVR----QADYGDE 56
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
+ SA+ G + + +S + V NV+ + AK +K + TS
Sbjct: 57 AALTSALQGVEKLL-------LIS----SSEVGQRAPQHRNVINA-AKAAGVKFIAYTSL 104
Query: 131 IGA 133
+ A
Sbjct: 105 LHA 107
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF WL L G TVK P L E + + ++
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA--PTVPSLFETARVADGMQSEIGDIR 67
Query: 69 EEGSFDSAVDGC--DGVFHTAS-PVIFLS-DNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
++ ++ + VFH A+ P++ LS P + VMGT+ +L + V +K
Sbjct: 68 DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGGVKA 126
Query: 125 VVLTSS 130
VV +S
Sbjct: 127 VVNITS 132
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-09
Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 19/123 (15%)
Query: 13 VTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
VTGA+G + +++ LL++ + A VR+ K L + G R + +
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE--KASTLAD-QGVEVR----HGDYNQP 57
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
S A G + F+S + ++ NV+++ A+ +K + T
Sbjct: 58 ESLQKAFAGVSKLL-------FISGPHYDN--TLLIVQHANVVKA-ARDAGVKHIAYTGY 107
Query: 131 IGA 133
A
Sbjct: 108 AFA 110
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 5e-09
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 28/131 (21%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN--SPKTEHLRELDGATERLHLFKANLL 68
+ +TG +G + S L++ L +G+ + V D N + K E L + G + + + ++
Sbjct: 23 ILITGGAGCLGSNLIEHWLPQGHEI--LVID-NFATGKREVLPPVAGLS----VIEGSVT 75
Query: 69 EEGSFDSAVDGC--DGVFHTA-------SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
+ G + A D V H+A + N V G++NV ++ +K
Sbjct: 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATN---------VQGSINVAKAASK- 125
Query: 120 HSIKRVVLTSS 130
+KR++ +
Sbjct: 126 AGVKRLLNFQT 136
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-08
Identities = 34/207 (16%), Positives = 60/207 (28%), Gaps = 44/207 (21%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
M G + + + G +G++ + +VK L+ G+ R PNS KT L E +
Sbjct: 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR-PNSSKTTLLDEF--QSLGAI 61
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS 121
+ K L E + D V + P ++ +L + +
Sbjct: 62 IVKGELDEHEKLVELMKKVDVVISALAF--------------PQILDQFKILEAIKVAGN 107
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
IKR + S G + P + E + +
Sbjct: 108 IKRFLP-SDFGVEEDRINALPPFEALIERK----------------------RMIRRAIE 144
Query: 182 ENGIDLVAIHPG----TVIGPFFQPIL 204
E I + I +P
Sbjct: 145 EANIPYTYVSANCFASYFINYLLRPYD 171
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-08
Identities = 39/194 (20%), Positives = 66/194 (34%), Gaps = 43/194 (22%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
+TG+ G V L L G+ V VR P L+ A++ L
Sbjct: 152 ITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLL------------ 199
Query: 73 FDSAVDGCDGVFHTASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130
DG D + H A IF +D+ + I + V+ T + A+ ++ S+
Sbjct: 200 -----DGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA 254
Query: 131 IGAMLLNETPMTPDVVIDETWFSNP------VLCKENKEWYSLAKTLAEEAAWKFAKENG 184
+G + D ++ E S +C ++W E A A + G
Sbjct: 255 VGFYGHDRG----DEILTEE--SESGDDFLAEVC---RDW--------EHATAP-ASDAG 296
Query: 185 IDLVAIHPGTVIGP 198
+ I G +
Sbjct: 297 KRVAFIRTGVALSG 310
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-08
Identities = 31/209 (14%), Positives = 66/209 (31%), Gaps = 43/209 (20%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M S + + GA+G++ + K L G+ VR+ + +L + +
Sbjct: 1 MGS----RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS 56
Query: 61 --HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAK 118
++ ++ + S AV D V T + + +N++++ +
Sbjct: 57 GANIVHGSIDDHASLVEAVKNVDVVISTVGSL--------------QIESQVNIIKAIKE 102
Query: 119 VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 178
V ++KR S G + N + P + E +
Sbjct: 103 VGTVKR-FFPSEFGNDVDNVHAVEPAKSVFEVK----------------------AKVRR 139
Query: 179 FAKENGIDLVAIHPGTVIGPFFQPILNFG 207
+ GI + G F + + G
Sbjct: 140 AIEAEGIPYTYVSSNCFAGYFLRSLAQAG 168
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-07
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 24/113 (21%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+TG +GFV +L L ++ V T R N K + + + +++
Sbjct: 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSR-NNEAKLPN----------VEMISLDIM 61
Query: 69 EEGSFDSAVDGC--DGVFHTAS----PVIFLSDNPQ--ADIVDPAVMGTLNVL 113
+ + D +FH A+ + N + V GTL+VL
Sbjct: 62 DSQRVKKVISDIKPDYIFHLAAKSSVKDSW--LNKKGTFSTN---VFGTLHVL 109
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-07
Identities = 18/129 (13%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATER-L 60
M ++ V + G +G++ +V + G+ R + ++ L +
Sbjct: 1 MD---KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 57
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
L +A+L + A+ D V + ++ ++ L ++ + +
Sbjct: 58 KLIEASLDDHQRLVDALKQVDVVISALA----------GGVLSHHILEQLKLVEAIKEAG 107
Query: 121 SIKRVVLTS 129
+IKR + +
Sbjct: 108 NIKRFLPSE 116
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-07
Identities = 34/224 (15%), Positives = 66/224 (29%), Gaps = 43/224 (19%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M+G ++ G G+ A L + L +G+ + T R+P+ + E +R
Sbjct: 3 AMTG----TLLSF-GH-GYTARVLSRALAPQGWRIIGTSRNPD--QMEAIRASG-----A 49
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
+ ++DG + + +P + D V A+ + A+
Sbjct: 50 EPLLWPGE-----EPSLDGVTHLLISTAP------DSGGDPVLAAL-----GDQIAARAA 93
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
+ V S+ +DET P + + +
Sbjct: 94 QFRWVGYLSTTAVY-----GDHDGAWVDETTPLTPTAAR--------GRWRVMAEQQ-WQ 139
Query: 181 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAI 224
+ L + GP P G I +I + I
Sbjct: 140 AVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRI 183
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 8e-07
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 1 MMSGEGEEKVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-- 57
M+ +K++ +TGAS GF + L G+ V A++RD ++ + G
Sbjct: 1 MVM---SKKIILITGASSGFGRLT-AEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD 56
Query: 58 --ERLHLFKANLLEEGSFDSAVD 78
L + ++ + S D A+D
Sbjct: 57 NDVDLRTLELDVQSQVSVDRAID 79
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 9e-07
Identities = 28/128 (21%), Positives = 42/128 (32%), Gaps = 19/128 (14%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
K V + GA+G L+ +L V A R EH R LD L
Sbjct: 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR---KALAEHPR-LDNPVGPLAELLPQ 61
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQA-DIVDPAVMGTLNVLRSCAKVHSIKRV 125
L D F I + + +A VD L V + + +
Sbjct: 62 LD---------GSIDTAFCCLGTTIKEAGSEEAFRAVD--FDLPLAVGKRALE-MGARHY 109
Query: 126 VLTSSIGA 133
++ S++GA
Sbjct: 110 LVVSALGA 117
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-06
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 20/137 (14%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD--PNSPKTEHLRELDGATERLHLFK 64
E + + +TG +GFV S L + K V D ++ + R + +
Sbjct: 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68
Query: 65 ANLLEEGSFDSAVD-------GCDGVFHTASPVIFLSD----NPQADIVDPAVMGTLNVL 113
+ ++ +D D +FH A+ +SD N + + LN+L
Sbjct: 69 KGEVIAADINNPLDLRRLEKLHFDYLFHQAA----VSDTTMLNQELVM-KTNYQAFLNLL 123
Query: 114 RSCAKVHSIKRVVLTSS 130
+V+ SS
Sbjct: 124 EIARSKK--AKVIYASS 138
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-06
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHL---- 62
E+ V VTGA+G V V +L +RGY V A+ + ++L++L GA+E +
Sbjct: 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE--AADYLKQL-GASEVISREDVY 206
Query: 63 -FKANLLEEGSFDSAVD 78
L + + AVD
Sbjct: 207 DGTLKALSKQQWQGAVD 223
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 9e-06
Identities = 37/241 (15%), Positives = 73/241 (30%), Gaps = 78/241 (32%)
Query: 1 MMSGEGEEKVVCVTGAS---GFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELD 54
++ + +TG + G LVK LL + T R+ K L +L
Sbjct: 14 LVPRGSHMNSILITGCNRGLGLG---LVKALLNLPQPPQHLFTTCRNREQAKE--LEDLA 68
Query: 55 GATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS-PVIF-----LSDNPQADIVDPAVM- 107
+H+ + +L ++D V +GV V+F + + V +
Sbjct: 69 KNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELL 128
Query: 108 --------GTLNV-------LRSCAKVHSIKR--------VVLTSSIGAMLLNETPMTPD 144
+ + L+ AK + + + ++S +G++ N
Sbjct: 129 DTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDG---- 184
Query: 145 VVIDETWFSNPVLCKENKEWYS----------LAKTLAEEAAWKFAKENGIDLVAIHPGT 194
Y+ K+L+ + I V++HPG
Sbjct: 185 ------------------GMYAYRTSKSALNAATKSLSVD-----LYPQRIMCVSLHPGW 221
Query: 195 V 195
V
Sbjct: 222 V 222
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-05
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 8 EKVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKA 65
KV VTGAS GF + + + + G TV T R E L +L A +R
Sbjct: 5 AKVWLVTGASSGFGRA-IAEAAVAAGDTVIGTARRT-----EALDDLVAAYPDRAEAISL 58
Query: 66 NLLEEGSFDSAVD 78
++ + D
Sbjct: 59 DVTDGERIDVVAA 71
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-05
Identities = 15/122 (12%), Positives = 46/122 (37%), Gaps = 17/122 (13%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS---PKTEHLRELDGATERLHLFKANL 67
+ + G +G + +V ++ G A VR + P+T+ + + + L + ++
Sbjct: 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
+ + A+ D V A + + + ++++ + ++K+
Sbjct: 65 NDHETLVKAIKQVDIVICAAGRL--------------LIEDQVKIIKAIKEAGNVKKFFP 110
Query: 128 TS 129
+
Sbjct: 111 SE 112
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHL---- 62
E V VTGA+G V S V +L +RGYTV+A+ + ++LR L GA E L
Sbjct: 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA--EHDYLRVL-GAKEVLAREDVM 205
Query: 63 -FKANLLEEGSFDSAVD 78
+ L++ + +AVD
Sbjct: 206 AERIRPLDKQRWAAAVD 222
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 4e-05
Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 59/225 (26%)
Query: 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKA---------TVRDPNSPKT--EHLRELDGA 56
K V + G G +W+ + Y V+ +++ NSP+T E L++L
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVC-LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL--- 205
Query: 57 TERLHLFKANLLEEGSFDSAV-DGCDGVFHTASPVIFLSDNPQA-----DIVDPAVMGTL 110
L+ N S + + ++ ++ +
Sbjct: 206 ---LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 111 NVLRSCAKVHSIKRVVLTS---SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE---- 163
N+ SC +++LT+ + L T T + +D S + E K
Sbjct: 263 NL--SC-------KILLTTRFKQVTDFLSAAT--TTHISLDH--HSMTLTPDEVKSLLLK 309
Query: 164 WYSL-AKTLAEEAAWKFAKENGIDLVAIHPGTV--IGPFFQPILN 205
+ + L E + +P + I + L
Sbjct: 310 YLDCRPQDLPREV------------LTTNPRRLSIIAESIRDGLA 342
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 5e-05
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 15/80 (18%)
Query: 9 KVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL------DGATERLH 61
K V +TGA G + + +++ LLQ G V T + T++ + + G+ L
Sbjct: 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGS--TLI 534
Query: 62 LFKANLLEEGSF---DSAVD 78
+ N GS ++ ++
Sbjct: 535 VVPFNQ---GSKQDVEALIE 551
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 7e-05
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLF 63
++ V VTGASG V S V LL + GY V A + +L+ L GA R
Sbjct: 146 QDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRES--THGYLKSL-GANRILSRDEFA 202
Query: 64 KANLLEEGSFDSAVD 78
++ LE+ + A+D
Sbjct: 203 ESRPLEKQLWAGAID 217
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 9e-05
Identities = 22/203 (10%), Positives = 57/203 (28%), Gaps = 43/203 (21%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRD--PNSPKTEHLRELDGATERLHLFKAN 66
+ + + G +G++ ++V+ L + R P+S + + + + + +
Sbjct: 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ E S + D V P + ++++ + +IKR +
Sbjct: 65 MEEHEKMVSVLKQVDIVISALPF--------------PMISSQIHIINAIKAAGNIKRFL 110
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
S G P+ P + E + + +
Sbjct: 111 -PSDFGCEEDRIKPLPPFESVLEKK----------------------RIIRRAIEAAALP 147
Query: 187 LVAIHPGTVIGPFFQPILNFGAE 209
+ F +N+
Sbjct: 148 YTYVSA----NCFGAYFVNYLLH 166
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 4e-04
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ VTG +G ++L KLLL++GY V V +S LREL G + ++
Sbjct: 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMA 73
Query: 69 EEGSFDSAVDGC--DGVFHTAS----PVIFLSDNPQ--ADIVDPAVMGTLNVL 113
+ S AV V++ A+ + + P + +G ++L
Sbjct: 74 DACSVQRAVIKAQPQEVYNLAAQSFVGASW--NQPVTTGVVD---GLGVTHLL 121
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 4e-04
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 33/166 (19%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD--PNSPKT--EHLRELDGAT 57
+ E K+V VTG +G++ S V L++ GY V D NS L L
Sbjct: 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDC--VVADNLSNSTYDSVARLEVLTK-- 60
Query: 58 ERLHLFKANLLEEGSFDSAVD--GCDGVFH----------TASPVIFLSDNPQADIVDPA 105
+ ++ +L + + D V H T P+ + +N
Sbjct: 61 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNN--------- 111
Query: 106 VMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV-IDET 150
++GT+ +L + +++ + V +SS A + + P+++ I E
Sbjct: 112 ILGTVVLLELMQQ-YNVSKFVFSSS--ATVYGDATRFPNMIPIPEE 154
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 4e-04
Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 77/233 (33%)
Query: 9 KVVCVTGAS---GFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLF 63
V VTGA+ G LV+ L++ + AT RD K L+ + + R+H+
Sbjct: 4 GSVVVTGANRGIGLG---LVQQLVKDKNIRHIIATARDVE--KATELKSIKDS--RVHVL 56
Query: 64 KANLLEEGSFDSAV---------DGCDGVFHTASPVIFLSDNPQADIVDPAVM------- 107
+ + S D+ V DG + + A + LS + + AV+
Sbjct: 57 PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAG--VLLSYGTNTE-PNRAVIAEQLDVN 113
Query: 108 --GTLNVLRSC--------------AKVHSIKRVV-LTSSIGAMLLNETPMTPDVVIDET 150
+ + + S V+ ++S +G++ N + V+
Sbjct: 114 TTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLA-- 171
Query: 151 WFSNPVLCKENKEWYS--------LAKTLAEEAAWKFAKENGIDLVAIHPGTV 195
Y +TLA + K++ + +V PG V
Sbjct: 172 --------------YRMSKAAINMFGRTLAVD-----LKDDNVLVVNFCPGWV 205
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 5e-04
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 1/95 (1%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V + GA+GF+ ++ L R ++ + + + E+
Sbjct: 13 VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA 105
+ + + + S V S Q +V
Sbjct: 73 EAMEKILKEHEIDI-VVSTVGGESILDQIALVKAM 106
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATV---RDPNSPKTEHLRELDGATERLHLF 63
+ + + +TG +G V+ +L K + RD K + + R+ F
Sbjct: 20 DNQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDEL--KQSEMAM-EFNDPRMRFF 75
Query: 64 KANLLEEGSFDSAVDGCDGVFHTAS--PVIFLSDNP-QADIVDPAVMGTLNVLRSCAKVH 120
++ + + A++G D H A+ V NP + + +MG NV+ +C K +
Sbjct: 76 IGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLEC--IKTNIMGASNVINACLK-N 132
Query: 121 SIKRVVLTSSIGA 133
+I +V+ S+ A
Sbjct: 133 AISQVIALSTDKA 145
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 38.5 bits (90), Expect = 9e-04
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 9 KVVCVTGAS---GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT----ERLH 61
VV +TG S G + + + + V AT+RD L E A L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK--TQGRLWEAARALACPPGSLE 60
Query: 62 LFKANLLEEGSFDSAVD 78
+ ++ + S +A +
Sbjct: 61 TLQLDVRDSKSVAAARE 77
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 232 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.98 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.98 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.98 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.98 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.98 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.98 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.98 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.98 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.98 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.97 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.97 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.97 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.97 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.97 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.97 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.97 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.97 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.97 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.97 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.97 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.97 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.97 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.97 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.97 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.97 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.97 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.97 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.97 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.97 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.97 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.97 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.97 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.97 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.97 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.97 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.97 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.97 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.97 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.97 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.97 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.97 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.97 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.97 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.97 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.97 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.97 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.97 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.97 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.97 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.97 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.97 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.97 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.97 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.97 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.97 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.97 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.97 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.97 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.97 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.97 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.97 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.97 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.97 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.97 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.97 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.97 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.97 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.97 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.97 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.97 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.97 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.97 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.97 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.97 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.97 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.97 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.97 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.97 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.97 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.97 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.97 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.97 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.97 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.97 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.97 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.97 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.97 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.97 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.97 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.97 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.97 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.97 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.97 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.97 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.97 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.97 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.97 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.97 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.97 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.97 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.96 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.96 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.96 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.96 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.96 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.96 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.96 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.96 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.96 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.96 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.96 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.96 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.96 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.96 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.96 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.96 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.96 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.96 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.96 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.96 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.96 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.96 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.96 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.96 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.96 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.96 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.96 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.96 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.96 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.96 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.96 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.96 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.96 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.96 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.96 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.96 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.96 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.96 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.96 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.96 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.96 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.96 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.96 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.96 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.96 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.96 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.96 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.96 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.96 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.96 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.96 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.96 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.96 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.96 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.96 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.96 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.96 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.96 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.96 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.96 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.96 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.96 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.96 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.96 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.96 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.96 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.96 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.96 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.96 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.96 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.96 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.96 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.96 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.96 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.96 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.96 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.96 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.96 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.95 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.95 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.95 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.95 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.95 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.95 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.95 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.95 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.95 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.95 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.94 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.94 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.94 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.94 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.94 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.94 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.94 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.94 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.94 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.94 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.93 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.93 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.93 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.93 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.93 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.93 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.93 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.93 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.92 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.92 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.92 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.92 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.92 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.92 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.92 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.92 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.91 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.91 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.91 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.91 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.91 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.91 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.9 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.9 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.9 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.89 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.89 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.89 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.89 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.89 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.89 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.87 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.87 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.87 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.87 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.85 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.85 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.83 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.83 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.82 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.79 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.77 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.76 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.6 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.33 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.27 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.21 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.08 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.96 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.94 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.87 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.86 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.86 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.84 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.82 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.74 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.68 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.62 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.59 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.59 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.58 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.57 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.55 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.51 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.49 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.38 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.35 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.34 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.33 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.31 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.24 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.23 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.22 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.2 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.2 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 98.19 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.16 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.15 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.14 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.12 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.12 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.11 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.09 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.08 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 98.07 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 98.05 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.04 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.04 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.03 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 98.02 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.02 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.01 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 98.0 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.99 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.96 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.94 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.94 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.93 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.92 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.91 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.9 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.9 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.9 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.89 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.88 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.87 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.87 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.86 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.86 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.84 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.82 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.81 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.8 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.79 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.78 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 97.77 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.76 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.76 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.75 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.75 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.74 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.73 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.72 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.69 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.69 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.69 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.68 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.67 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.67 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.66 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.62 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.61 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.59 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.59 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 97.59 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.57 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.57 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.56 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.55 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.54 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.53 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.51 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.51 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.49 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.47 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.42 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.41 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.4 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.4 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.39 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.38 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.36 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.36 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.35 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 97.35 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.34 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.33 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.33 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.33 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 97.33 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.3 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.29 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.29 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.28 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.28 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.28 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.26 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 97.26 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.25 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.23 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 97.15 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.15 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.15 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.14 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.14 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.14 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.14 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.13 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.12 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.12 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.1 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.06 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.05 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 97.05 | |
| 1obb_A | 480 | Maltase, alpha-glucosidase; glycosidase, sulfinic | 97.05 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 97.01 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.0 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.99 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.99 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.98 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 96.95 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.95 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.94 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.92 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.91 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.89 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.89 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.89 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.88 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.88 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.87 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.85 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.85 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.85 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.83 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.83 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.82 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.8 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.8 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.8 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.8 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.8 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.79 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.79 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.79 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.78 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.76 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.76 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.75 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.73 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.72 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.72 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.71 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.7 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 96.7 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.69 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.65 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.64 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=236.77 Aligned_cols=177 Identities=21% Similarity=0.151 Sum_probs=147.7
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
++|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....++.++++|++|+++++++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~-~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLN-QIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999999876543 4445555556789999999999999998876
Q ss_pred --CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.++++|++++++|+.+++++++++.|.| +.++||++||..+..+.+.
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~-------- 153 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA-------- 153 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS--------
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC--------
Confidence 579999999842 346678899999999999999999999975 4589999999988765433
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|++||.+...+.+.++.+ +|||||+|+||+|.||+....
T Consensus 154 --------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 198 (254)
T 4fn4_A 154 --------------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS 198 (254)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC
T ss_pred --------------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc
Confidence 244778888777777777776 599999999999999986544
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=226.32 Aligned_cols=171 Identities=14% Similarity=0.085 Sum_probs=140.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GC 80 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~ 80 (232)
+.++||++|||||++|||+++++.|+++|++|++++|+.+.... ....++..+++|++|+++++++++ ++
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence 45799999999999999999999999999999999999865432 123578899999999999999876 57
Q ss_pred CEEEEccccc---ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 81 DGVFHTASPV---IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 81 d~vi~~Ag~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
|++|||||.. .+.+.++|++++++|+.+++++++++.+++ +.++||++||..+..+.+.
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~---------------- 143 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSAD---------------- 143 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSS----------------
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCC----------------
Confidence 9999999953 346678899999999999999999998875 3479999999988765433
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|++||.....+.+.++.+ +|||||+|+||+|.||+....
T Consensus 144 ------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~ 188 (242)
T 4b79_A 144 ------RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL 188 (242)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc
Confidence 244888888888887777776 599999999999999987654
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-35 Score=234.04 Aligned_cols=178 Identities=20% Similarity=0.141 Sum_probs=147.5
Q ss_pred CCC--CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSG--EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~--~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
||. +|+||++|||||++|||+++++.|+++|++|++++|++++.. +..+++.....++.++++|++|+++++++++
T Consensus 1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~-~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLA-ESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH-HHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence 444 479999999999999999999999999999999999876443 4445555556789999999999999988876
Q ss_pred ------CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCC
Q 026852 79 ------GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 ------~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||. +.+.+.++|++++++|+.+++++++++.|.| +.++||++||..+..+.+.
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~---- 155 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT---- 155 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT----
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC----
Confidence 57999999984 3456788999999999999999999998865 3479999999988765443
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+.+.++.+ +|||||+|+||+|.||+...
T Consensus 156 ------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~ 199 (255)
T 4g81_D 156 ------------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTA 199 (255)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHH
T ss_pred ------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhc
Confidence 244888888888888888777 59999999999999998643
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-34 Score=230.87 Aligned_cols=176 Identities=19% Similarity=0.181 Sum_probs=143.0
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+..|+||++|||||++|||+++++.|+++|++|++++|+.++.+ +..+++ ..+...+++|++|+++++++++
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~-~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLD-AAIAEI---GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHc---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 667799999999999999999999999999999999999976433 333344 4567899999999999998876
Q ss_pred ----CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 ----GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ----~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||. +.+.++++|++.+++|+.+++++++++.|.| ..++||++||..+..+.+.
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~--------- 169 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA--------- 169 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT---------
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC---------
Confidence 56999999983 3456778999999999999999999999986 3469999999987765433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|++||++...+.+.++.+ +|||||+|+||+|.||+....
T Consensus 170 -------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~ 214 (273)
T 4fgs_A 170 -------------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL 214 (273)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC------
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHh
Confidence 245899999999998888887 489999999999999986543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-34 Score=229.60 Aligned_cols=177 Identities=18% Similarity=0.199 Sum_probs=146.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|..+|+||++|||||++|||+++++.|+++|++|++++|+.+.. +..+++.....++.++++|++|+++++++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--HHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHH
Confidence 67789999999999999999999999999999999999998753 2333444445678999999999999988875
Q ss_pred ----CCCEEEEccccc----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 ----GCDGVFHTASPV----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ----~~d~vi~~Ag~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.|.+ +.++||++||..+..+.+.
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~--------- 149 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN--------- 149 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS---------
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC---------
Confidence 579999999953 235567899999999999999999999875 3479999999988766543
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|++||.+...+.+.++.+ +|||||+|+||+|.||+...
T Consensus 150 -------------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~ 193 (258)
T 4gkb_A 150 -------------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRN 193 (258)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhh
Confidence 244888888888888777776 59999999999999998654
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=227.81 Aligned_cols=173 Identities=18% Similarity=0.133 Sum_probs=143.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~ 82 (232)
+|+||++|||||++|||+++++.|+++|++|++++|+..+ +..+++.....+...+++|++|+++++++++ ++|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~---~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD---ETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 4899999999999999999999999999999999998642 3444555556789999999999999998876 5799
Q ss_pred EEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 83 VFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 83 vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
+|||||. +.+.++++|++++++|+.|++++++++.+.| ..++||++||..+..+.+.
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~-------------- 148 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR-------------- 148 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS--------------
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC--------------
Confidence 9999984 3456788999999999999999999988864 2479999999988765433
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
. ..|+.||.....+.+.++.+ +|||||+|+||+|.||+...
T Consensus 149 ~--------~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~ 192 (247)
T 4hp8_A 149 V--------PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEA 192 (247)
T ss_dssp C--------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred C--------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhh
Confidence 2 34777777777777777766 59999999999999998643
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=229.79 Aligned_cols=213 Identities=19% Similarity=0.207 Sum_probs=169.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-----CCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-----TERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+++|+||||||+|+||++++++|+++|++|++++|+..... ..+..+... ..+++++++|++|.+++.++++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQ-YNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH-HHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCch-hhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 45689999999999999999999999999999999876433 222222111 157899999999999999999999
Q ss_pred CEEEEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 81 DGVFHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 81 d~vi~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|+|||+||... .....++...+++|+.++.++++++.+. +.++||++||... ++... ..+.+|+....|
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~v-yg~~~----~~~~~E~~~~~p---- 171 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSST-YGDHP----ALPKVEENIGNP---- 171 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG-GTTCC----CSSBCTTCCCCC----
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHh-cCCCC----CCCCccCCCCCC----
Confidence 99999998642 2234556788999999999999999887 7889999999954 44332 344555554433
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.+|.++|.+++.+++++|++++++||++|+||...... .....++...+.+. +++++.+.|+|+|
T Consensus 172 --~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 247 (351)
T 3ruf_A 172 --LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCY 247 (351)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred --CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEE
Confidence 3569999999999999999989999999999999999875532 24566677777777 6688999999987
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-32 Score=226.63 Aligned_cols=213 Identities=17% Similarity=0.210 Sum_probs=164.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d 81 (232)
+++|+||||||+|+||++++++|+++| ++|++.+|.........+..+. ...+++++++|++|.+++.+++++ +|
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 567899999999999999999999999 6788888776433222333222 135799999999999999999987 99
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||+||.... ...+++...+++|+.++.++++++.+. +.++||++||.. .|+... ...+++|+....|
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~-vy~~~~---~~~~~~E~~~~~p----- 170 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE-VYGSLG---KTGRFTEETPLAP----- 170 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG-GGCCCC---SSCCBCTTSCCCC-----
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH-HhCCCC---cCCCcCCCCCCCC-----
Confidence 99999997533 345677889999999999999999987 789999999984 444332 1334555544332
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.+|.++|.+++.++.+++++++++||++|+||..... .....++...+.+. +++++.+.|+|+|
T Consensus 171 -~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (346)
T 4egb_A 171 -NSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLH 242 (346)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEE
T ss_pred -CChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEE
Confidence 356999999999999999988999999999999999987554 35566777777777 6688999999987
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=218.00 Aligned_cols=167 Identities=17% Similarity=0.129 Sum_probs=138.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|+||||||++|||+++++.|+++|++|++++|+++. ++++.....++.++++|++|+++++++++ ++|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKR-----SADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999999999999999998642 33333445678999999999999988875 679
Q ss_pred EEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 82 GVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 82 ~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
++|||||. +.+.+.++|++++++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~--------------- 142 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD--------------- 142 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT---------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC---------------
Confidence 99999984 3446778899999999999999999998874 4589999999988765433
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~ 202 (232)
...|++||.....+.+.++.+. |||||+|+||+|.||+...
T Consensus 143 -------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~ 185 (247)
T 3ged_A 143 -------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE 185 (247)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH
Confidence 2448888888888888877773 8999999999999988653
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-31 Score=222.42 Aligned_cols=211 Identities=19% Similarity=0.242 Sum_probs=159.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+|+||||||+||||++++++|+++| ++|++++|+......+.+..+.. ..+++++++|++|.+++.+++.++|+|||
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 81 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED-DPRYTFVKGDVADYELVKELVRKVDGVVH 81 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhcc-CCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence 4689999999999999999999996 89999999763222122322221 35789999999999999999999999999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+||.... .+.++++..+++|+.++.++++++.+....++||++||... ++... ..+.+|+....+ ...
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v-yg~~~----~~~~~E~~~~~~------~~~ 150 (336)
T 2hun_A 82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEV-YGDIL----KGSFTENDRLMP------SSP 150 (336)
T ss_dssp CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGG-GCCCS----SSCBCTTBCCCC------CSH
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHH-HCCCC----CCCcCCCCCCCC------CCc
Confidence 9986432 22345678999999999999999998832379999999854 44322 223444432222 356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|+.||.++|.+++.++.+++++++++|||+|+||..... ...+.++...+.+. +++++.+.++|+|
T Consensus 151 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 219 (336)
T 2hun_A 151 YSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLY 219 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEE
Confidence 999999999999999988999999999999999986432 23455666677665 5688889999987
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=222.27 Aligned_cols=193 Identities=39% Similarity=0.713 Sum_probs=140.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-CCCCcc-hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPK-TEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+|+||||||+||||++++++|+++|++|++++| +++... ...+..+.....+++++++|++|.+++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999998 653211 111222211123678999999999999999999999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc--ccch
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK--ENKE 163 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~ 163 (232)
+|++......+.+++.+++|+.|+.++++++.+.++.++||++||..++++.... ..+.+|+.+..+.+.. ....
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~---~~~~~e~~~~~~~~~~~~~p~~ 157 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD---KDVLDESDWSDVDLLRSVKPFG 157 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC---CSEECTTCCCCHHHHHHHCCTT
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC---CeecCCccccchhhhcccCccc
Confidence 9986421112223568999999999999999886457899999999766543221 2345555443332211 1112
Q ss_pred -hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 164 -WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 164 -~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.|+.||.++|.++..++.++|++++++|||+|+||+....
T Consensus 158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~ 198 (322)
T 2p4h_X 158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPK 198 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSS
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCC
Confidence 5999999999999888888899999999999999986543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=219.44 Aligned_cols=178 Identities=16% Similarity=0.157 Sum_probs=138.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++
T Consensus 1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLA-PLVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH
Confidence 566789999999999999999999999999999999999886543 3344444445689999999999999999887
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 151 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG-------- 151 (252)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT--------
T ss_pred hhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC--------
Confidence 679999999953 235667889999999999999999998764 4479999999977755332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcE-EEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDL-VAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~-~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+.+.++.+ +||++ ++++||.|.|++...
T Consensus 152 --------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~ 196 (252)
T 3h7a_A 152 --------------FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE 196 (252)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------
T ss_pred --------------CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc
Confidence 255999999999999998887 48999 899999999998654
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.2e-31 Score=223.27 Aligned_cols=212 Identities=18% Similarity=0.201 Sum_probs=161.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc--CCCEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 83 (232)
.+|+||||||+||||++++++|+++|++|++++|+...... ..+.+.. ...++.++++|++|.+++.++++ ++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKRE-AIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTH-HHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHH-HHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 45799999999999999999999999999999998765432 2222211 13468899999999999999998 89999
Q ss_pred EEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+||.... ...+.+.+.+++|+.++.++++++.+. +.++||++||... ++... ..+.+|+.... +.
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~-~g~~~----~~~~~e~~~~~------~~ 150 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATV-YGVPE----RSPIDETFPLS------AT 150 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG-BCSCS----SSSBCTTSCCB------CS
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceE-ecCCC----CCCCCCCCCCC------CC
Confidence 999986432 223445688999999999999999887 6789999999854 44332 33444544322 23
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC-CcEEEEccCceeCCCCCCC--------CcchHHHHHHHHcCC-----CCC------C
Q 026852 163 EWYSLAKTLAEEAAWKFAKENG-IDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGN-----IYS------A 222 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~-i~~~~v~pg~v~g~~~~~~--------~~~~~~~~~~~~~~~-----~~~------~ 222 (232)
..|+.||.++|.+++.++.+++ ++++++||++++||..... .......+.+...+. +++ +
T Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (341)
T 3enk_A 151 NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPD 230 (341)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTT
T ss_pred ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCC
Confidence 6699999999999999988875 9999999999999964221 123344555544443 345 8
Q ss_pred ccceeeeec
Q 026852 223 AIQDRIMIY 231 (232)
Q Consensus 223 ~~~~~~~~~ 231 (232)
+.+.|+|+|
T Consensus 231 g~~~~~~i~ 239 (341)
T 3enk_A 231 GTGVRDYIH 239 (341)
T ss_dssp SSCEECEEE
T ss_pred CCeeEeeEE
Confidence 899999997
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-31 Score=222.81 Aligned_cols=195 Identities=48% Similarity=0.859 Sum_probs=145.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++|+||||||+||||++++++|+++|++|++++|+++.... ..+..+.....+++++++|++|.+++.++++++|+||
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 367899999999999999999999999999999998764211 1111111112368899999999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc--c-cc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC--K-EN 161 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~-~~ 161 (232)
|+|++......++..+.+++|+.|+.++++++.+....+|||++||..++++.... ....+|+.+....+. . ..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~---~~~~~E~~~~~~~~~~~~~~~ 159 (337)
T 2c29_D 83 HVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ---LPVYDESCWSDMEFCRAKKMT 159 (337)
T ss_dssp ECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC---CSEECTTCCCCHHHHHHHCCT
T ss_pred EeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC---CcccCcccCCchhhhcccCCc
Confidence 99987522222333468999999999999999987337899999999766654321 223455543332221 0 12
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.++|.++..+++++|++++++||++|+||.....
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~ 201 (337)
T 2c29_D 160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS 201 (337)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC
Confidence 345999999999999888877899999999999999986543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=219.93 Aligned_cols=176 Identities=18% Similarity=0.238 Sum_probs=144.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+.+|++|||||+||||++++++|+++|++|++++|+......+..+++.....++.++++|++|.++++++++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5679999999999999999999999999999998865322223333444445678999999999999998876
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.++|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 150 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG----------- 150 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC-----------
Confidence 789999999954 234567788999999999999999997753 4579999999977765432
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.+..
T Consensus 151 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 195 (246)
T 3osu_A 151 -----------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195 (246)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc
Confidence 255999999999999998885 589999999999999987544
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.4e-32 Score=218.00 Aligned_cols=174 Identities=25% Similarity=0.266 Sum_probs=137.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|.+.+++|++|||||+||||++++++|+++|++|++++|+++.... ..+++ ..++.++++|++|.+++.++++
T Consensus 1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE-PAAEL---GAAVRFRNADVTNEADATAALAFAK 76 (257)
T ss_dssp ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHHH
Confidence 4456889999999999999999999999999999999999865432 22222 3568899999999999998886
Q ss_pred ----CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---------CccEEEEecccceecc
Q 026852 79 ----GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---------SIKRVVLTSSIGAMLL 136 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~vSS~~~~~~ 136 (232)
++|++|||||... +.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+
T Consensus 77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tpc_A 77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG 156 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence 7899999999542 23456788999999999999999998863 3468999999987765
Q ss_pred CCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 137 NETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.+. ...|+.||++.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 157 ~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 202 (257)
T 3tpc_A 157 QIG----------------------QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA 202 (257)
T ss_dssp CTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---
T ss_pred CCC----------------------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc
Confidence 432 255999999999999999888 6999999999999999764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-31 Score=218.01 Aligned_cols=200 Identities=24% Similarity=0.311 Sum_probs=157.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+||||++++++|+++|++|++++|+++.... . . ..+++++++|++|.+ +.+++++ |+|||+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~----~--~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~ 71 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-F----V--NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAA 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGG-G----S--CTTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchh-h----c--CCCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence 479999999999999999999999999999998764321 1 1 356889999999999 8888888 99999998
Q ss_pred ccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 89 PVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 89 ~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
... ....+++...+++|+.++.++++++.+. +.++||++||... |+... ..+.+|+....| ...|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~v-yg~~~----~~~~~e~~~~~p------~~~Y~~ 139 (312)
T 3ko8_A 72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTV-YGDAD----VIPTPEEEPYKP------ISVYGA 139 (312)
T ss_dssp SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGG-GCSCS----SSSBCTTSCCCC------CSHHHH
T ss_pred CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHH-hCCCC----CCCCCCCCCCCC------CChHHH
Confidence 532 3456678899999999999999999887 7889999999854 44332 234445433222 356999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
||.++|.+++.++.+++++++++|||+++||.... .....++.+...+. .++++.+.|+|+|
T Consensus 140 sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 205 (312)
T 3ko8_A 140 AKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLY 205 (312)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEE
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence 99999999999999999999999999999998653 34456666666663 6889999999987
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-31 Score=217.00 Aligned_cols=174 Identities=21% Similarity=0.153 Sum_probs=145.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLA-GAAASV---GRGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHH-HHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCCeEEEECCCCCHHHHHHHHHHHH
Confidence 556789999999999999999999999999999999999987543 233333 3568899999999999999887
Q ss_pred ----CCCEEEEccccc-c------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 ----GCDGVFHTASPV-I------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ----~~d~vi~~Ag~~-~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||.. . +.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----- 155 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM----- 155 (271)
T ss_dssp HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS-----
T ss_pred HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC-----
Confidence 789999999954 1 24567788999999999999999997753 4579999999977654332
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 156 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 198 (271)
T 3tzq_B 156 -----------------STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE 198 (271)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred -----------------ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence 255999999999999999988 6999999999999999875
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.1e-31 Score=221.89 Aligned_cols=212 Identities=17% Similarity=0.101 Sum_probs=164.0
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHH--CCCeEEEEEcCCCCcch-----hhhhh-hcCCCCceEEEEcCCCCcchHH
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQ--RGYTVKATVRDPNSPKT-----EHLRE-LDGATERLHLFKANLLEEGSFD 74 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~--~g~~V~~~~r~~~~~~~-----~~~~~-~~~~~~~~~~~~~D~~~~~~~~ 74 (232)
.+.+++|+||||||+||||++++++|++ .|++|++++|+...... +.+.. ......++.++++|++|.+++.
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence 3457889999999999999999999999 99999999997652110 00000 1112346789999999999999
Q ss_pred Hh-hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 75 SA-VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 75 ~~-~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
++ ..++|+|||+||.... +.++++..+++|+.++.++++++.+. +.+ ||++||. +.|+... . +.+|+...
T Consensus 85 ~~~~~~~D~vih~A~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~-~vyg~~~----~-~~~E~~~~ 155 (362)
T 3sxp_A 85 RLEKLHFDYLFHQAAVSDT-TMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSA-GVYGNTK----A-PNVVGKNE 155 (362)
T ss_dssp HHTTSCCSEEEECCCCCGG-GCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEG-GGGCSCC----S-SBCTTSCC
T ss_pred HhhccCCCEEEECCccCCc-cccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcH-HHhCCCC----C-CCCCCCCC
Confidence 99 8899999999996433 56778999999999999999999886 544 9999997 4555433 1 44555433
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCcccee
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDR 227 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~ 227 (232)
.| .+.|+.||.++|.+++.++.+ ++++++||++++||...... .....++...+.+. +++++.+.|
T Consensus 156 ~p------~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (362)
T 3sxp_A 156 SP------ENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLR 227 (362)
T ss_dssp CC------SSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEE
T ss_pred CC------CChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEE
Confidence 32 366999999999999887665 99999999999999875432 34566677777777 678899999
Q ss_pred eeec
Q 026852 228 IMIY 231 (232)
Q Consensus 228 ~~~~ 231 (232)
+|+|
T Consensus 228 ~~i~ 231 (362)
T 3sxp_A 228 DFVY 231 (362)
T ss_dssp ECEE
T ss_pred ccEE
Confidence 9987
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8e-32 Score=218.23 Aligned_cols=164 Identities=20% Similarity=0.171 Sum_probs=136.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|+||++|||||++|||+++++.|+++|++|++++|+..+.. .+..++++|++++++++++++
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-----------PEELFVEADLTTKEGCAIVAEATRQRL 76 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------CTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-----------CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999865321 122378999999999888775
Q ss_pred -CCCEEEEcccc-------cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 -GCDGVFHTASP-------VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 -~~d~vi~~Ag~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||. +.+.++++|++.+++|+.+++++++++.|.| +.++||++||..+..+.+..
T Consensus 77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~------- 149 (261)
T 4h15_A 77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES------- 149 (261)
T ss_dssp SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-------
T ss_pred CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-------
Confidence 57999999983 2335678899999999999999999998875 45899999999776553320
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+...+.+.++.+ +|||||+|+||+|.||+.
T Consensus 150 --------------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~ 191 (261)
T 4h15_A 150 --------------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEAS 191 (261)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcch
Confidence 144888888888888888887 599999999999999864
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=220.67 Aligned_cols=173 Identities=21% Similarity=0.225 Sum_probs=143.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC-CceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.... .++.++++|++|+++++++++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADID-ACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 378899999999999999999999999999999999875433 2333343333 679999999999999998876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEeccccee-ccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAM-LLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~-~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+. .+.+.
T Consensus 86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------- 157 (262)
T 3pk0_A 86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG-------- 157 (262)
T ss_dssp HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT--------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC--------
Confidence 789999999953 234567788999999999999999998874 56899999998664 33221
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 158 --------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 199 (262)
T 3pk0_A 158 --------------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGL 199 (262)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred --------------ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccc
Confidence 255999999999999999988 699999999999999864
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=220.16 Aligned_cols=224 Identities=34% Similarity=0.484 Sum_probs=164.3
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEE-EcCCCCcchHHHhhcCC
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLF-KANLLEEGSFDSAVDGC 80 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-~~D~~~~~~~~~~~~~~ 80 (232)
..++++|+||||||+||||++++++|+++|++|++++|+.++.. ...+.+.. ...+++++ ++|++|.+++.++++++
T Consensus 6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred ccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence 44578899999999999999999999999999999999864321 11111110 12468888 89999999999999999
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChh----
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV---- 156 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~---- 156 (232)
|+|||+||.... ..++.+.+++|+.++.++++++.+..+.++||++||...++.... .....+++|+.+....
T Consensus 85 d~vih~A~~~~~--~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~ 161 (342)
T 1y1p_A 85 AGVAHIASVVSF--SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKP-NVEGIYLDEKSWNLESIDKA 161 (342)
T ss_dssp SEEEECCCCCSC--CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCT-TCCCCEECTTCCCHHHHHHH
T ss_pred CEEEEeCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCC-CCCCcccCccccCchhhhhh
Confidence 999999986532 246788999999999999999986446789999999866532211 0111345555432110
Q ss_pred ------hccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCCCCc--chHHHHHHHHcCC---CCCCc
Q 026852 157 ------LCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGN---IYSAA 223 (232)
Q Consensus 157 ------~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~~~~--~~~~~~~~~~~~~---~~~~~ 223 (232)
.+......|+.||.++|.+++.+++++ +++++++|||+++||....... ....++.+.+.++ +++++
T Consensus 162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1y1p_A 162 KTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM 241 (342)
T ss_dssp HHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC
Confidence 011223669999999999999998875 7999999999999998765421 4566676777776 24444
Q ss_pred cceeeeec
Q 026852 224 IQDRIMIY 231 (232)
Q Consensus 224 ~~~~~~~~ 231 (232)
+.|+|+|
T Consensus 242 -~~~~~v~ 248 (342)
T 1y1p_A 242 -PPQYYVS 248 (342)
T ss_dssp -CSEEEEE
T ss_pred -CcCCEeE
Confidence 7788886
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=216.12 Aligned_cols=200 Identities=21% Similarity=0.283 Sum_probs=157.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+||||++++++|+++|+.|.+..|+..... .. ...+.++++|+++ +++.++++++|+|||+|+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-----~~---~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~ 72 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-----FV---NEAARLVKADLAA-DDIKDYLKGAEEVWHIAA 72 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-----GS---CTTEEEECCCTTT-SCCHHHHTTCSEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-----hc---CCCcEEEECcCCh-HHHHHHhcCCCEEEECCC
Confidence 57999999999999999999999954444434433211 11 3468899999999 999999999999999998
Q ss_pred cc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 89 PV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 89 ~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
.. ...+.+++++.+++|+.++.++++++.+. +.++||++||... |+... ..+.+|+....| ...|+.
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~v-yg~~~----~~~~~E~~~~~~------~~~Y~~ 140 (313)
T 3ehe_A 73 NPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTV-YGEAK----VIPTPEDYPTHP------ISLYGA 140 (313)
T ss_dssp CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGG-GCSCS----SSSBCTTSCCCC------CSHHHH
T ss_pred CCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHH-hCcCC----CCCCCCCCCCCC------CCHHHH
Confidence 53 33556788999999999999999999887 6789999999854 44332 234444443222 356999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
+|.++|.+++.++.+++++++++||++|+||.... .....++.+...+. .++++.+.|+|+|
T Consensus 141 sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 206 (313)
T 3ehe_A 141 SKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIY 206 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence 99999999999999999999999999999998653 34566777777663 6889999999997
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=222.07 Aligned_cols=213 Identities=20% Similarity=0.213 Sum_probs=165.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc----C-CCCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD----G-ATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+++|+||||||+||||++++++|+++|++|++++|++.... +.++.+. . ...++.++++|++|.+++.++++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQ-RNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH-HHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccch-hhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 45689999999999999999999999999999999875322 1121111 0 0246899999999999999999999
Q ss_pred CEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 81 DGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 81 d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|+|||+||.... ...++++..+++|+.++.++++++.+. +.++||++||...+ +... ..+.+|+....|
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~-~~~~----~~~~~E~~~~~~---- 173 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTY-GDHP----GLPKVEDTIGKP---- 173 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGG-TTCC----CSSBCTTCCCCC----
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhc-CCCC----CCCCCCCCCCCC----
Confidence 999999986421 123457788999999999999999887 78899999999554 3322 234455544332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.+|.++|.+++.++.+++++++++|||+++||...... .....++.....+. +++++.+.|+|+|
T Consensus 174 --~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 249 (352)
T 1sb8_A 174 --LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCY 249 (352)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred --CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEE
Confidence 3569999999999999998888999999999999999865431 23455666666666 5688899999987
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-31 Score=214.30 Aligned_cols=172 Identities=18% Similarity=0.264 Sum_probs=144.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|+||||||+||||++++++|+++|++|++++|++.+.. ..+++++++|++|.+++.++++++|+||||
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 4589999999999999999999999999999999986432 357899999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
||.. ..+++++.+++|+.|+.++++++.+. +.++||++||..++..... ....+|+....+ ...|+
T Consensus 72 Ag~~---~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~----~~~~~e~~~~~~------~~~Y~ 137 (267)
T 3rft_A 72 GGIS---VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQ----TERLGPDVPARP------DGLYG 137 (267)
T ss_dssp CSCC---SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBT----TSCBCTTSCCCC------CSHHH
T ss_pred CCCc---CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCC----CCCCCCCCCCCC------CChHH
Confidence 9973 45678899999999999999999887 7789999999866532221 233444433222 35699
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
.||.+.+.+++.++++++++++++|||.|+++..+.
T Consensus 138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~ 173 (267)
T 3rft_A 138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY 173 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC
Confidence 999999999999999999999999999999987554
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=218.16 Aligned_cols=177 Identities=20% Similarity=0.205 Sum_probs=145.1
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
...+++|++|||||+||||++++++|+++|++|++++|+......+..+++.....++.++++|++|.++++++++
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3458899999999999999999999999999999999854322223333344445678999999999999998876
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 174 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG-------- 174 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC--------
Confidence 689999999954 234567889999999999999999987753 4579999999977765432
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 175 --------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 217 (269)
T 4dmm_A 175 --------------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS 217 (269)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC
T ss_pred --------------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc
Confidence 255999999999999998887 5899999999999999864
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=217.39 Aligned_cols=209 Identities=21% Similarity=0.278 Sum_probs=161.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHC---C---CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR---G---YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
|+||||||+||||++++++|+++ | ++|++++|+......+.+..+.. ..+++++++|++|.+++.+++.++|+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~ 79 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA-DPRLRFVHGDIRDAGLLARELRGVDA 79 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT-CTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhccc-CCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence 36999999999999999999997 8 99999999764222222333221 35789999999999999999999999
Q ss_pred EEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 83 VFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 83 vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
|||+||.... .+.+++++.+++|+.++.++++++.+. +.++||++||... ++... +.+.+|+....+
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~v-yg~~~----~~~~~E~~~~~~------ 147 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQV-YGSID----SGSWTESSPLEP------ 147 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGG-GCCCS----SSCBCTTSCCCC------
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHH-hCCCC----CCCCCCCCCCCC------
Confidence 9999986432 123456788999999999999999987 6789999999854 44322 223444432222
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++.+++++++++||++++||..... .....++...+.+. +++++.+.++|+|
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 219 (337)
T 1r6d_A 148 NSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVH 219 (337)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEe
Confidence 356999999999999999888899999999999999986432 34455666677666 5688899999987
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=214.17 Aligned_cols=196 Identities=16% Similarity=0.234 Sum_probs=159.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|++... . + .++.++++|++ .+++.++++++|+|||+||
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK--A-I-------NDYEYRVSDYT-LEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc--c-C-------CceEEEEcccc-HHHHHHhhcCCCEEEEccc
Confidence 6899999999999999999999999999999994321 1 1 16889999999 9999999999999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
..... ++...+++|+.++.++++++.+. +.+|||++||.. .|+... ..+.+|+....| ...|+.+
T Consensus 72 ~~~~~---~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~-vyg~~~----~~~~~E~~~~~p------~~~Y~~s 136 (311)
T 3m2p_A 72 TRGSQ---GKISEFHDNEILTQNLYDACYEN-NISNIVYASTIS-AYSDET----SLPWNEKELPLP------DLMYGVS 136 (311)
T ss_dssp CCCSS---SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG-GCCCGG----GCSBCTTSCCCC------SSHHHHH
T ss_pred cCCCC---ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHH-HhCCCC----CCCCCCCCCCCC------CchhHHH
Confidence 75432 66788999999999999999887 788999999974 444322 234555554333 3569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|.++|.+++.++.+++++++++||++++||..... .....++.....+. +++++.+.++|+|
T Consensus 137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~ 201 (311)
T 3m2p_A 137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLY 201 (311)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEE
Confidence 99999999999998999999999999999987654 35566777777777 6688999999987
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=218.27 Aligned_cols=174 Identities=17% Similarity=0.179 Sum_probs=140.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
|+++|++|||||+||||+++++.|+++|++|++++|+.++.. +..+++.....++.++++|++|.+++.++++
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIE-AIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356799999999999999999999999999999999875433 3334444445678999999999999988876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~---------- 149 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT---------- 149 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC----------
Confidence 689999999853 234567889999999999999999998864 4579999999977655332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ||++++|+||+|.|++..
T Consensus 150 ------------~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~ 190 (264)
T 3tfo_A 150 ------------AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAG 190 (264)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------
T ss_pred ------------ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccc
Confidence 2559999999999999999885 999999999999999754
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=221.27 Aligned_cols=214 Identities=21% Similarity=0.183 Sum_probs=162.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v 83 (232)
+++|+||||||+||||++++++|+++|++|++++|++.+... ....+. ...+++++++|++|.+++.+++++ +|+|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-LFETAR-VADGMQSEIGDIRDQNKLLESIREFQPEIV 84 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-HHHHTT-TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccch-hhHhhc-cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence 567899999999999999999999999999999998765432 222221 235789999999999999999986 8999
Q ss_pred EEccccc-ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+||.. ...+.+++...+++|+.++.++++++.+....++||++||... |+.... ....+|+.... ..
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v-yg~~~~---~~~~~E~~~~~------~~ 154 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKC-YDNKEW---IWGYRENEAMG------GY 154 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGG-BCCCCS---SSCBCTTSCBC------CS
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHH-hCCCCc---CCCCCCCCCCC------CC
Confidence 9999852 2223455678999999999999999988733789999999954 443221 11233332211 23
Q ss_pred hhHHHHHHHHHHHHHHHHHhc---------CCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKEN---------GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~---------~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
..|+.||.++|.+++.++.++ +++++++|||+|+||...........++.....+. .+.++.+.|+|+|
T Consensus 155 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 234 (357)
T 1rkx_A 155 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH 234 (357)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEe
Confidence 569999999999999988764 99999999999999986443344566666677676 4556788999987
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=218.94 Aligned_cols=211 Identities=19% Similarity=0.216 Sum_probs=161.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|+||||||+||||++++++|+++ |++|++++|+........+..+. ..+++++++|++|.+++.++++++|+|||+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAAKADAIVHY 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence 68999999999999999999999 89999999976432222333332 257899999999999999999999999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCC--------CCCccccccCCCCChhh
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP--------MTPDVVIDETWFSNPVL 157 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~--------~~~~~~~~e~~~~~~~~ 157 (232)
||.... .+.++++..+++|+.++.++++++.+. +. +||++||... ++.... .....+.+|+....
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~v-yg~~~~~~~~~~~~~~~~~~~~E~~~~~--- 156 (348)
T 1oc2_A 83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEV-YGDLPLREDLPGHGEGPGEKFTAETNYN--- 156 (348)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGG-GCCBCCGGGSTTTTCSTTSSBCTTSCCC---
T ss_pred CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccce-eCCCcccccccccccccCCCcCCCCCCC---
Confidence 986432 223456789999999999999999998 55 9999999854 332210 00012344443222
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
....|+.||.++|.+++.++.+++++++++|||+++||..... .....++.....+. +++++.+.++|+|
T Consensus 157 ---~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 229 (348)
T 1oc2_A 157 ---PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIH 229 (348)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEE
Confidence 2356999999999999999888899999999999999986432 34455666666666 5688889999987
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=217.72 Aligned_cols=176 Identities=19% Similarity=0.243 Sum_probs=145.0
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.....++.++++|++|.++++++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLE-DVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 556789999999999999999999999999999999999875433 3333444445689999999999999988876
Q ss_pred ----CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 156 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAK------- 156 (264)
T ss_dssp HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTT-------
T ss_pred HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCc-------
Confidence 679999999753 234567889999999999999999988764 2379999999977654332
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 157 ---------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 198 (264)
T 3ucx_A 157 ---------------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL 198 (264)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH
T ss_pred ---------------cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccH
Confidence 245999999999999999887 699999999999999874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=218.17 Aligned_cols=177 Identities=15% Similarity=0.171 Sum_probs=140.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.++++|++|||||+||||++++++|+++|++|++++|+.........+++... ..++.++++|++|.++++++++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34778999999999999999999999999999999995432222333333332 4678999999999999998876
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 172 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF-------- 172 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC--------
Confidence 689999999953 234567889999999999999999997753 4579999999977654332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+...
T Consensus 173 --------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 216 (281)
T 3v2h_A 173 --------------KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK 216 (281)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh
Confidence 255999999999999999887 48999999999999998643
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=219.00 Aligned_cols=177 Identities=22% Similarity=0.219 Sum_probs=143.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC---CceEEEEcCCCCcchHHHhhc
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT---ERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~ 78 (232)
|...+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.... .++.++++|++|++++.++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (281)
T 3svt_A 5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLA-GAVQELEALGANGGAIRYEPTDITNEDETARAVD 83 (281)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 556688999999999999999999999999999999999875433 2333333222 378999999999999988876
Q ss_pred -------CCCEEEEcccc------cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCC
Q 026852 79 -------GCDGVFHTASP------VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 79 -------~~d~vi~~Ag~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~ 142 (232)
++|++|||||. +.+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--- 160 (281)
T 3svt_A 84 AVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW--- 160 (281)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT---
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC---
Confidence 57999999985 2335567789999999999999999998864 3469999999977654332
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.++ ||++++|+||+|+||+..
T Consensus 161 -------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 203 (281)
T 3svt_A 161 -------------------FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVA 203 (281)
T ss_dssp -------------------CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred -------------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh
Confidence 2459999999999999998874 799999999999999754
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=214.06 Aligned_cols=174 Identities=18% Similarity=0.125 Sum_probs=144.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..|++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLE-EAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999875433 3344454445789999999999999998876
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||. ..+.+.+.|+..+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 152 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG-------- 152 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT--------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC--------
Confidence 67999999984 2345667889999999999999999997753 3579999999977654332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 153 --------------~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~ 195 (257)
T 3imf_A 153 --------------VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG 195 (257)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCC
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcc
Confidence 245999999999998888765 489999999999999864
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=217.39 Aligned_cols=178 Identities=22% Similarity=0.215 Sum_probs=145.5
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc-----------h----hhhhhhcCCCCceEEEEcC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-----------T----EHLRELDGATERLHLFKAN 66 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-----------~----~~~~~~~~~~~~~~~~~~D 66 (232)
|...+++|++|||||+||||+++++.|+++|++|++++|++.... . +..+++.....++.++++|
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 84 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD 84 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence 556689999999999999999999999999999999999842110 1 2223334445789999999
Q ss_pred CCCcchHHHhhc-------CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEec
Q 026852 67 LLEEGSFDSAVD-------GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTS 129 (232)
Q Consensus 67 ~~~~~~~~~~~~-------~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vS 129 (232)
++|.++++++++ ++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ + .++||++|
T Consensus 85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is 164 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS 164 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence 999999998876 689999999953 234567889999999999999999998864 2 46999999
Q ss_pred ccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 130 S~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
|..+..+.+. ...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 165 S~~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 217 (286)
T 3uve_A 165 SVGGLKAYPH----------------------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH 217 (286)
T ss_dssp CGGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred chhhccCCCC----------------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence 9977654332 255999999999999999887 5899999999999999864
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-31 Score=214.15 Aligned_cols=178 Identities=19% Similarity=0.162 Sum_probs=145.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.........+++.....++.++++|++|.++++++++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 458899999999999999999999999999999998776432223334444445678999999999999998876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.++|++.+++|+.++.++++++.+.+ ..++||++||..+..+...
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~----------- 175 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP----------- 175 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST-----------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC-----------
Confidence 789999999853 235667889999999999999999999975 3579999999755432111
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
....|+.||++.+.+++.++.+. ||++++|+||+|.||+...
T Consensus 176 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 220 (271)
T 3v2g_A 176 ----------GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA 220 (271)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence 12559999999999999998874 8999999999999998654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=214.06 Aligned_cols=178 Identities=21% Similarity=0.247 Sum_probs=142.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR-ALGDELTAAGAKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 444578899999999999999999999999999999999875332 2233333334578999999999999988876
Q ss_pred ----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC--ccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS--IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||... +.+.++++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 151 (247)
T 2jah_A 80 EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRN-------- 151 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTT--------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCC--------
Confidence 6899999998532 234567889999999999999999988641 179999999977644322
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||++.||+...
T Consensus 152 --------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 195 (247)
T 2jah_A 152 --------------AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH 195 (247)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred --------------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence 245999999999999888876 49999999999999998543
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=223.64 Aligned_cols=194 Identities=45% Similarity=0.777 Sum_probs=139.3
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+|+||||||+||||++++++|+++|++|++++|+++.... ..+..+. ...+++++++|++|.+++.++++++|+|||+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 5789999999999999999999999999999998754321 1122222 1346889999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhh--ccccch-
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL--CKENKE- 163 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~- 163 (232)
|++......+..++.+++|+.|+.++++++.+..+.+|||++||..++++..... ...+.+|+.+..+.+ +.....
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~~~ 166 (338)
T 2rh8_A 88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDG-TGLVVDEKNWTDIEFLTSAKPPTW 166 (338)
T ss_dssp SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTC-SCCCCCTTTTTCC-------CCCC
T ss_pred CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCC-CCcccChhhccchhhccccCCccc
Confidence 9865322122234589999999999999998873378999999986554321100 011344443322211 111112
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.|+.||.++|.+++.+++++|++++++||++|+||.....
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~ 206 (338)
T 2rh8_A 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD 206 (338)
T ss_dssp CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC
Confidence 4999999999999988877899999999999999987554
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=215.93 Aligned_cols=176 Identities=19% Similarity=0.180 Sum_probs=143.0
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
|+..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.+++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH-EAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 556688999999999999999999999999999999999875332 222223211 3468899999999999998876
Q ss_pred -----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 153 (263)
T 3ai3_A 80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY------ 153 (263)
T ss_dssp HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC------
Confidence 7899999998532 23456788999999999999999998753 4589999999976643221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 154 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (263)
T 3ai3_A 154 ----------------EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDW 195 (263)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence 245999999999999998887 699999999999999864
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=214.95 Aligned_cols=206 Identities=17% Similarity=0.181 Sum_probs=158.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 82 (232)
+.+.|+||||||+||||++++++|+++|++|++++|++.. . . + ++.++++|++|.+++.+++++ +|+
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~-~----l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~ 77 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K-L----P-----NVEMISLDIMDSQRVKKVISDIKPDY 77 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C-C----T-----TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c-c----c-----eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence 3566899999999999999999999999999999998764 1 1 1 588999999999999999986 999
Q ss_pred EEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 83 VFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 83 vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
|||+||.... .+.++++..+++|+.++.++++++.+..+.++||++||...+ +... ....+.+|+....+
T Consensus 78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~-g~~~--~~~~~~~E~~~~~~------ 148 (321)
T 2pk3_A 78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEY-GMIL--PEESPVSEENQLRP------ 148 (321)
T ss_dssp EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGT-BSCC--GGGCSBCTTSCCBC------
T ss_pred EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhc-CCCC--CCCCCCCCCCCCCC------
Confidence 9999996432 335577899999999999999999554357899999999543 3220 01233445443222
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHc---C--C---CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLIN---G--N---IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~---~--~---~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++.++|++++++|||+++||..... .....++..... + . .++++.+.++|+|
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~ 225 (321)
T 2pk3_A 149 MSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTD 225 (321)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEE
T ss_pred CCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEE
Confidence 356999999999999999888899999999999999987543 233444555444 5 2 6778888999986
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=213.53 Aligned_cols=172 Identities=19% Similarity=0.239 Sum_probs=143.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..+..++++|++|.++++++++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQ-AISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 68899999999999999999999999999999999875432 222223 2357889999999999998887
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.++|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 151 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG----------- 151 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC-----------
Confidence 789999999953 234667889999999999999999998853 4579999999877765433
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||+|.||+....
T Consensus 152 -----------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 196 (248)
T 3op4_A 152 -----------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL 196 (248)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc
Confidence 255999999999999998887 489999999999999986543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-31 Score=214.30 Aligned_cols=178 Identities=19% Similarity=0.196 Sum_probs=144.9
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||++++++|+++|++|++++|+.........+++.....++.++++|++|.+++.++++
T Consensus 12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999988765432223334444445789999999999999998876
Q ss_pred ----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccce-eccCCCCCCCcccc
Q 026852 79 ----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGA-MLLNETPMTPDVVI 147 (232)
Q Consensus 79 ----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~-~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+. .++||++||..+ ..+.+.
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 163 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK-------- 163 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC--------
Confidence 679999999953 2346678899999999999999999999863 469999999852 222111
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+..
T Consensus 164 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 206 (270)
T 3is3_A 164 --------------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFH 206 (270)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHH
T ss_pred --------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence 255999999999999999888 5899999999999999854
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=215.72 Aligned_cols=175 Identities=20% Similarity=0.185 Sum_probs=143.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc--------c---hhhhhhhcCCCCceEEEEcCCCCcchH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--------K---TEHLRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--------~---~~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
.+++|++|||||+||||++++++|+++|++|++++|++... . .+..+.+.....++.++++|++|.+++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 37889999999999999999999999999999999985321 1 112223333356799999999999999
Q ss_pred HHhhc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCC
Q 026852 74 DSAVD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNE 138 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~ 138 (232)
+++++ ++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 166 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF 166 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence 98876 689999999953 234567889999999999999999987753 457999999997765433
Q ss_pred CCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 139 TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 139 ~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
. ...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 167 ~----------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 210 (281)
T 3s55_A 167 A----------------------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH 210 (281)
T ss_dssp T----------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred C----------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence 2 255999999999999999987 5899999999999999864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-31 Score=221.95 Aligned_cols=212 Identities=19% Similarity=0.292 Sum_probs=164.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-CcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~v 83 (232)
|++|+||||||+|+||++++++|+++ |++|++++|++++... +. ...+++++++|++ |.+.+.++++++|+|
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~~-~~~~v~~~~~Dl~~d~~~~~~~~~~~d~V 95 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD-----LV-KHERMHFFEGDITINKEWVEYHVKKCDVI 95 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGG-----GG-GSTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhh-----hc-cCCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence 56789999999999999999999998 9999999998764321 11 1357999999999 999999999999999
Q ss_pred EEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc-cc
Q 026852 84 FHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK-EN 161 (232)
Q Consensus 84 i~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~ 161 (232)
||+||.... ...+++.+.+++|+.++.++++++.+. + +++|++||. ..|+... ..+.+|+..+.+..+. ..
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~-~vyg~~~----~~~~~e~~~~~~~~p~~~p 168 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTS-EVYGMCA----DEQFDPDASALTYGPINKP 168 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCG-GGGBSCC----CSSBCTTTCCEEECCTTCT
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcH-HHhCCCC----CCCCCccccccccCCCCCC
Confidence 999986432 223456788999999999999999988 6 899999997 5555433 2334444432111000 12
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-------CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.+|.++|.+++.++.+ +++++++||++|+||..... ......++.....++ +++++.+.|+|+|
T Consensus 169 ~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 247 (372)
T 3slg_A 169 RWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTY 247 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEE
T ss_pred CCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEE
Confidence 356999999999999998887 99999999999999986542 124556666777776 6788999999987
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=215.09 Aligned_cols=175 Identities=20% Similarity=0.194 Sum_probs=143.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC----------cc--hhhhhhhcCCCCceEEEEcCCCCcch
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS----------PK--TEHLRELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~----------~~--~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (232)
.+++|++|||||+||||++++++|+++|++|++++|+... .. .+..+.+.....++.++++|++|.++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4789999999999999999999999999999999985321 00 12223344445788999999999999
Q ss_pred HHHhhc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceecc
Q 026852 73 FDSAVD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLL 136 (232)
Q Consensus 73 ~~~~~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~ 136 (232)
++++++ ++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+.+ + .++||++||..+..+
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 998876 689999999953 235667889999999999999999998864 2 578999999977654
Q ss_pred CCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 137 NETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.+. ...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 172 ~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 217 (280)
T 3pgx_A 172 TPG----------------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE 217 (280)
T ss_dssp CTT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred CCC----------------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc
Confidence 332 255999999999999999887 6999999999999999864
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=217.71 Aligned_cols=205 Identities=24% Similarity=0.354 Sum_probs=158.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||+||||++++++|+++|++|++++|...... +.+ ..++.++++|++|.+++.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 73 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR----ENV---PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQ 73 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG----GGS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch----hhc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999999999999999999999999999998653221 111 1357789999999999999998 89999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccC-CCCCCCccccccCCCCChhhccccchh
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLN-ETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
|+.... .+.+++...+++|+.++.++++++.+. +.++||++||.+..++. .. ..+.+|+....| ...
T Consensus 74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~----~~~~~E~~~~~~------~~~ 142 (311)
T 2p5y_A 74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPE----GERAEETWPPRP------KSP 142 (311)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCT----TCCBCTTSCCCC------CSH
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCC----CCCcCCCCCCCC------CCh
Confidence 986432 223456789999999999999999886 67899999998555543 11 223344433222 256
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC---CC-----CCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN---IY-----SAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~ 231 (232)
|+.||.++|.+++.++++++++++++||++++||...... ...+.++.+...+. ++ +++.+.|+|+|
T Consensus 143 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 219 (311)
T 2p5y_A 143 YAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVY 219 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEE
Confidence 9999999999999998888999999999999999875432 23344555566665 45 78899999987
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=218.36 Aligned_cols=178 Identities=22% Similarity=0.200 Sum_probs=145.8
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc--------c---hhhhhhhcCCCCceEEEEcCCCCc
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--------K---TEHLRELDGATERLHLFKANLLEE 70 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--------~---~~~~~~~~~~~~~~~~~~~D~~~~ 70 (232)
|+..+++|++|||||+||||+++++.|+++|++|++++|++... . .+..+++.....++.++++|++|.
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF 101 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 55678999999999999999999999999999999999984311 1 122233333456899999999999
Q ss_pred chHHHhhc-------CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccce
Q 026852 71 GSFDSAVD-------GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGA 133 (232)
Q Consensus 71 ~~~~~~~~-------~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~ 133 (232)
++++++++ ++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~ 181 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG 181 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence 99998876 689999999853 224567789999999999999999998863 3579999999977
Q ss_pred eccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 134 MLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
..+.+. ...|+.||++.+.+++.++.+. ||++++|+||+|+||+..
T Consensus 182 ~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 230 (299)
T 3t7c_A 182 LRGAEN----------------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL 230 (299)
T ss_dssp TSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred ccCCCC----------------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence 654332 2559999999999999998884 899999999999999864
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=214.54 Aligned_cols=172 Identities=18% Similarity=0.199 Sum_probs=143.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++ ..++.++++|++|++++.++++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERAR-QAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999875432 222333 3468899999999999998887
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 80 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 151 (259)
T 4e6p_A 80 AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL-------- 151 (259)
T ss_dssp SSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC--------
Confidence 789999999953 235667889999999999999999998864 1 469999999977654332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.++ ||++++|+||+|+||+..
T Consensus 152 --------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 194 (259)
T 4e6p_A 152 --------------VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD 194 (259)
T ss_dssp --------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH
T ss_pred --------------ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh
Confidence 2569999999999999998874 999999999999999753
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=221.93 Aligned_cols=201 Identities=20% Similarity=0.227 Sum_probs=157.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
..++|+||||||+||||++++++|+++|++|++++|++.. .++.++++|++|.+++.++++++|+||
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIMGVSAVL 82 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence 3677899999999999999999999999999999998753 356789999999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
|+|+.... ....++..+++|+.++.++++++.+. +.++||++||.. .|+... ....+.+|+....+ ...
T Consensus 83 h~A~~~~~-~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~-vyg~~~--~~~~~~~E~~~~~~------~~~ 151 (347)
T 4id9_A 83 HLGAFMSW-APADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGE-VYPENR--PEFLPVTEDHPLCP------NSP 151 (347)
T ss_dssp ECCCCCCS-SGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG-GTTTTS--CSSSSBCTTSCCCC------CSH
T ss_pred ECCcccCc-chhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHH-HhCCCC--CCCCCcCCCCCCCC------CCh
Confidence 99986532 23445889999999999999999887 788999999984 444321 11334555543322 366
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCcee-------------CCCCCCC----------CcchHHHHHHHHcCC---
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI-------------GPFFQPI----------LNFGAEVILNLINGN--- 218 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~-------------g~~~~~~----------~~~~~~~~~~~~~~~--- 218 (232)
|+.+|.++|.+++.++.+++++++++||++++ ||..... ......++.....+.
T Consensus 152 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (347)
T 4id9_A 152 YGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSH 231 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCE
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeE
Confidence 99999999999999999999999999999999 7664331 223445555666665
Q ss_pred CCCCccceeee
Q 026852 219 IYSAAIQDRIM 229 (232)
Q Consensus 219 ~~~~~~~~~~~ 229 (232)
+++++.+.|+|
T Consensus 232 ~~g~~~~~~~~ 242 (347)
T 4id9_A 232 ILARNENGRPF 242 (347)
T ss_dssp EEEECTTCCBC
T ss_pred EeCCCCcccCC
Confidence 67788999999
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=216.32 Aligned_cols=176 Identities=19% Similarity=0.252 Sum_probs=136.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+......+..+++.....++.++++|++|.++++++++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999999999999754322223334444445689999999999999998887
Q ss_pred -CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C---ccEEEEecccceeccCCCCCCCc
Q 026852 79 -GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S---IKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 -~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----- 180 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE----- 180 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C-----
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC-----
Confidence 789999999862 224567889999999999999999998864 1 469999999977755432
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.||+...
T Consensus 181 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 224 (280)
T 4da9_A 181 -----------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA 224 (280)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh
Confidence 245999999999999999888 58999999999999997643
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=214.65 Aligned_cols=174 Identities=14% Similarity=0.084 Sum_probs=144.4
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.....++.++++|++|.++++++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAE-AVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999875432 2333444445689999999999999988876
Q ss_pred --CCCEEEEcccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 --GCDGVFHTASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 --~~d~vi~~Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.++++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 156 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR---------- 156 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT----------
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC----------
Confidence 7899999999542 34557788999999999999999998753 4579999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+.
T Consensus 157 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 198 (256)
T 3gaf_A 157 ------------MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDAL 198 (256)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchh
Confidence 255999999999999999887 489999999999999864
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=211.33 Aligned_cols=174 Identities=16% Similarity=0.151 Sum_probs=136.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC-CCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
|+..+++|++|||||+||||++++++|+++|++|++++|++ ++.. + .+.....++.++++|++|.++++++++
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (249)
T 2ew8_A 1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-A---AIRNLGRRVLTVKCDVSQPGDVEAFGKQV 76 (249)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-H---HHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHH-H---HHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 45568899999999999999999999999999999999987 3221 1 222224578999999999999988864
Q ss_pred -----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 150 (249)
T 2ew8_A 77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA------ 150 (249)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC------
Confidence 789999999853 224566788999999999999999987753 4589999999977644322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+|++..
T Consensus 151 ----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 151 ----------------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE 193 (249)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence 255999999999999998887 4899999999999999754
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=216.31 Aligned_cols=176 Identities=22% Similarity=0.169 Sum_probs=145.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALA-ELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHH-HHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999999875432 3344454456789999999999999998876
Q ss_pred --CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEeccccee-ccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAM-LLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~-~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.+.+++.+++|+.+++++++++.+.+ +.++||++||..+. .+.+.
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------- 155 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG------- 155 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT-------
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC-------
Confidence 6899999999531 34567889999999999999999998863 45799999998665 22211
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|.||+...
T Consensus 156 ---------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 199 (280)
T 3tox_A 156 ---------------VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA 199 (280)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence 2559999999999999998884 8999999999999998643
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=218.78 Aligned_cols=173 Identities=21% Similarity=0.239 Sum_probs=142.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC-CceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.... .++.++++|++|.++++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELS-SVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999986543 3344444333 578999999999999888765
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEeccccee-ccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAM-LLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~-~~~~~~~~~~~~~ 147 (232)
++|++|||||... +.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+. .+.+.
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~-------- 188 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG-------- 188 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT--------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC--------
Confidence 6799999999532 34567889999999999999999987643 56899999998664 33222
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 189 --------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 230 (293)
T 3rih_A 189 --------------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL 230 (293)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcch
Confidence 255999999999999999887 599999999999999864
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=218.43 Aligned_cols=213 Identities=21% Similarity=0.185 Sum_probs=162.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|+||||||+||||++++++|+++|++|++++|++..... . ...+++++++|++|.+++.++++++|+|||+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~ 100 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--E-----DMFCDEFHLVDLRVMENCLKVTEGVDHVFNL 100 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--G-----GGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh--h-----ccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence 56799999999999999999999999999999998764321 1 0236789999999999999999999999999
Q ss_pred cccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 87 ASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 87 Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
||.... ...+++++.+++|+.++.++++++.+. +.++||++||...+...........+++|+... +......
T Consensus 101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~----~~~~~~~ 175 (379)
T 2c5a_A 101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175 (379)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS----SBCCSSH
T ss_pred ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCccCCCcCcccCC----CCCCCCh
Confidence 986432 115677899999999999999999887 778999999985442211100011223333210 1112356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
|+.+|.++|.+++.++.+++++++++|||+++||...... .....++.+.+.+. +++++.+.++|+|
T Consensus 176 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 249 (379)
T 2c5a_A 176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF 249 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred hHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence 9999999999999998888999999999999999865432 23455666666664 4788889999987
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=214.79 Aligned_cols=212 Identities=19% Similarity=0.145 Sum_probs=163.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi 84 (232)
.+++||||||+||||++++++|+++|++|++++|++.......++.+. ...+++++++|++|.+++.+++++ +|+||
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 467899999999999999999999999999999987653222333221 235689999999999999999985 69999
Q ss_pred Eccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCc-cEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 85 HTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 85 ~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
|+||.... ...+++...+++|+.++.++++++.+. +. ++||++||... ++... ..+.+|+....| .
T Consensus 92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v-~g~~~----~~~~~E~~~~~p------~ 159 (335)
T 1rpn_A 92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEM-FGLIQ----AERQDENTPFYP------R 159 (335)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGG-GCSCS----SSSBCTTSCCCC------C
T ss_pred ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHH-hCCCC----CCCCCcccCCCC------C
Confidence 99986432 234567889999999999999999887 54 89999999844 44322 223445543332 3
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
..|+.+|.++|.+++.++.+++++++++||+.++||...... .....++.+...+. .++++.+.|+|+|
T Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~ 234 (335)
T 1rpn_A 160 SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF 234 (335)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence 569999999999999998888999999999999999864332 12344555566665 4688899999987
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=210.36 Aligned_cols=175 Identities=20% Similarity=0.178 Sum_probs=140.2
Q ss_pred CCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
|+||++|||||+| |||+++++.|+++|++|++++|+++..+ +..+.+.. ...++.++++|++|++++.++++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRK-ELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 8999999999875 9999999999999999999999976443 22222222 23578899999999999988875
Q ss_pred ---CCCEEEEccccc---------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPV---------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.|...+++|+.++..+++.+.+.+ ..++||++||..+..+.+.
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~------ 156 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQN------ 156 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTT------
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCccc------
Confidence 679999999842 123445667788999999999999988865 3479999999987765433
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+...+.+.++.+ +|||||+|+||+|.||+....
T Consensus 157 ----------------~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~ 201 (256)
T 4fs3_A 157 ----------------YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV 201 (256)
T ss_dssp ----------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC
T ss_pred ----------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc
Confidence 245888888888888888877 599999999999999987654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=212.70 Aligned_cols=173 Identities=22% Similarity=0.213 Sum_probs=141.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++. .++.++++|++|.+++.++++
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~ 76 (260)
T 1nff_A 1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK-AMAAELA---DAARYVHLDVTQPAQWKAAVDTAV 76 (260)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTG---GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhh---cCceEEEecCCCHHHHHHHHHHHH
Confidence 566788999999999999999999999999999999999874322 2222222 248899999999999999887
Q ss_pred ----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 77 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 149 (260)
T 1nff_A 77 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA------- 149 (260)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC-------
Confidence 7899999999532 24456788999999999999999887753 4589999999977644321
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 150 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 191 (260)
T 1nff_A 150 ---------------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 191 (260)
T ss_dssp ---------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcc
Confidence 245999999999999998887 599999999999999864
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=214.72 Aligned_cols=174 Identities=16% Similarity=0.175 Sum_probs=144.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.+.......+.+.....++.++++|++|.++++++++
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999999999999999999999987533322333334445689999999999999988876
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 192 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET----------- 192 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT-----------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC-----------
Confidence 6899999998532 23567889999999999999999999975 3469999999977765432
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|+||+.
T Consensus 193 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 234 (291)
T 3ijr_A 193 -----------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI 234 (291)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHH
T ss_pred -----------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcc
Confidence 2559999999999999998874 89999999999999864
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-31 Score=212.48 Aligned_cols=172 Identities=18% Similarity=0.127 Sum_probs=143.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.+++.++++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIA-RIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 588999999999999999999999999999999999875332 222222 3578999999999999988765
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|++|||||.. .+.+.+++++.+++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 148 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG------------ 148 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC------------
Confidence 679999999853 234677889999999999999999999875 3469999999977654332
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|+||+...
T Consensus 149 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 192 (255)
T 4eso_A 149 ----------MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV 192 (255)
T ss_dssp ----------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence 2569999999999999999884 8999999999999998643
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=214.54 Aligned_cols=176 Identities=22% Similarity=0.239 Sum_probs=137.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++++|++|||||+||||++++++|+++|++|++++++......+..+++.....++.++++|++|.++++++++
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999986655432223333344445678999999999999998876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+. .++||++||..+..+.+.
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 171 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS----------- 171 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC-----------
Confidence 679999999853 2345667899999999999999999998753 469999999877654332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ||++++|+||+|.||+..
T Consensus 172 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 214 (267)
T 3u5t_A 172 -----------YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFL 214 (267)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccc
Confidence 2559999999999999999984 899999999999999853
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=216.87 Aligned_cols=176 Identities=19% Similarity=0.165 Sum_probs=144.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||+++++.|+++|++|++++|+.+... +..+++.....++.++++|++|.++++++++
T Consensus 22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAE-GIGAAFKQAGLEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 455688999999999999999999999999999999999875432 2223333334578899999999999998876
Q ss_pred ----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 173 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG------- 173 (270)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC-------
Confidence 6899999998532 34567889999999999999999998753 4579999999977765432
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+|++.
T Consensus 174 ---------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 215 (270)
T 3ftp_A 174 ---------------QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMT 215 (270)
T ss_dssp ---------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHH
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcch
Confidence 255999999999999998887 589999999999999864
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=212.36 Aligned_cols=173 Identities=18% Similarity=0.222 Sum_probs=140.0
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+.+|++|||||+||||++++++|+++|++|++++|+.++ +++.. ..++.++++|++|.+++.++++
T Consensus 10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-----LKALN--LPNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH-----HHTTC--CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHhh--cCCceEEEecCCCHHHHHHHHHHHH
Confidence 3344678999999999999999999999999999999998642 22222 2368899999999999998876
Q ss_pred ----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||.. .+.+.+.|++.+++|+.|++++++++.+.+ +.++||++||..+..+.+.
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------- 155 (266)
T 3p19_A 83 KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD------- 155 (266)
T ss_dssp HHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-------
T ss_pred HHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC-------
Confidence 679999999953 234556788999999999999999988753 5589999999977654332
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+....
T Consensus 156 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 200 (266)
T 3p19_A 156 ---------------HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHT 200 (266)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred ---------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcc
Confidence 255999999999999998887 599999999999999986543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=214.50 Aligned_cols=176 Identities=22% Similarity=0.145 Sum_probs=144.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.+... +..+++.....++.++++|++|.++++++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVE-EVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999875432 3444555556789999999999999988876
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+....+.
T Consensus 105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~---------- 174 (283)
T 3v8b_A 105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT---------- 174 (283)
T ss_dssp CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS----------
T ss_pred CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC----------
Confidence 6899999999532 34556788999999999999999997753 4579999999876542111
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
.....|+.||++.+.+++.++.+ +||++++|+||+|.||+...
T Consensus 175 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 220 (283)
T 3v8b_A 175 ----------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDN 220 (283)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCC
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccc
Confidence 01255999999999999999988 48999999999999998653
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=215.45 Aligned_cols=173 Identities=21% Similarity=0.208 Sum_probs=141.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
|+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVS-AAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999875433 3344454446789999999999999988876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhh--C---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKV--H---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+. + +.++||++||..+..+.+.
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~-------- 171 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY-------- 171 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC--------
Confidence 679999999853 23456778999999999999999999872 1 4579999999977654332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 172 --------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 213 (279)
T 3sju_A 172 --------------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA 213 (279)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHH
T ss_pred --------------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHH
Confidence 255999999999999999888 589999999999999864
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=213.88 Aligned_cols=177 Identities=18% Similarity=0.219 Sum_probs=145.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.+... +..+++.....++.++++|++|.++++++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQ-VVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478899999999999999999999999999999999876543 3334444445678999999999999999887
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.+.+++.+++|+.+++++++++.+.+ + .++||++||..+..+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------- 178 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------- 178 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---------
Confidence 7899999999532 34567889999999999999999998864 2 378999999876543211
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
.....|+.||.+.+.+++.++.+ +||++++|+||+|+|++...
T Consensus 179 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 224 (276)
T 3r1i_A 179 -----------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP 224 (276)
T ss_dssp -----------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc
Confidence 01245999999999999999888 58999999999999998653
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=216.69 Aligned_cols=174 Identities=20% Similarity=0.195 Sum_probs=145.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVA-QTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH-HHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 378999999999999999999999999999999999875433 3344444445678999999999999999887
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~---------- 171 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT---------- 171 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT----------
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC----------
Confidence 689999999953 235667889999999999999999988864 4579999999877655332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.+
T Consensus 172 ------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 214 (271)
T 4ibo_A 172 ------------VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ 214 (271)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh
Confidence 255999999999999999887 5899999999999999754
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=209.27 Aligned_cols=174 Identities=18% Similarity=0.183 Sum_probs=140.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-CCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|++|||||+||||++++++|+++|++|++++| ++++.. +..+++.....++.++++|++|.++++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN-EVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56799999999999999999999999999999999 543221 2233333334578899999999999998876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 150 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG---------- 150 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC----------
Confidence 689999999853 234566788999999999999999988753 4589999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||++.||+...
T Consensus 151 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 194 (246)
T 2uvd_A 151 ------------QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV 194 (246)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh
Confidence 245999999999998888776 48999999999999998653
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=216.08 Aligned_cols=215 Identities=17% Similarity=0.163 Sum_probs=157.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~ 86 (232)
|+||||||+||||++++++|+++|++|++++|+...........+.. ..+++++++|++|.+++.+++++ +|+|||+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 58999999999999999999999999999998643222222333322 24688999999999999999988 9999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCC------------ccccccCCCC
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTP------------DVVIDETWFS 153 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~------------~~~~~e~~~~ 153 (232)
||.... .+.++++..+++|+.++.++++++.+....++||++||... ++.....+. ....+|+...
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v-~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~ 159 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV-YGDLEQYKYNETETRYTCVDKPNGYDESTQL 159 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG-GTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHH-hCCCCcCCcccccccccccccccCccccCCC
Confidence 986432 22346778999999999999999999832259999999854 443221100 0012222211
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcC------C--CCCCc
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLING------N--IYSAA 223 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~------~--~~~~~ 223 (232)
.....|+.||.++|.+++.++.++|++++++|||+|+||...... .....++.+.+.+ . .++++
T Consensus 160 ------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 233 (347)
T 1orr_A 160 ------DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 233 (347)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCC
Confidence 123669999999999999998888999999999999999865421 1234444444433 2 57889
Q ss_pred cceeeeec
Q 026852 224 IQDRIMIY 231 (232)
Q Consensus 224 ~~~~~~~~ 231 (232)
.+.|+|+|
T Consensus 234 ~~~~~~i~ 241 (347)
T 1orr_A 234 KQVRDVLH 241 (347)
T ss_dssp CCEEECEE
T ss_pred cceEeeEE
Confidence 99999987
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-31 Score=212.81 Aligned_cols=176 Identities=20% Similarity=0.179 Sum_probs=142.8
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||++++++|+++|++|++++|+++... +..+++.....++.++++|++|.+++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE-KAEASVREKGVEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 445688999999999999999999999999999999999875332 2333343334578999999999999888776
Q ss_pred ----CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.++|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 153 (262)
T 1zem_A 80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN------ 153 (262)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT------
T ss_pred HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC------
Confidence 789999999853 224566789999999999999999998864 4579999999877654322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||++.|++.
T Consensus 154 ----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 195 (262)
T 1zem_A 154 ----------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM 195 (262)
T ss_dssp ----------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHH
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchh
Confidence 245999999999999888876 489999999999999874
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=212.90 Aligned_cols=171 Identities=22% Similarity=0.231 Sum_probs=141.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.++.. +..++. ..++.++++|++|.+++.++++
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD-DLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999999999999999876432 222222 3578999999999999998876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... ..+.+++++.+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 147 (281)
T 3m1a_A 79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG----------- 147 (281)
T ss_dssp CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC-----------
Confidence 7899999999532 34556788899999999999988887653 4589999999877654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+|+||+...
T Consensus 148 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (281)
T 3m1a_A 148 -----------FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK 191 (281)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence 256999999999999999988 79999999999999998643
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=213.96 Aligned_cols=178 Identities=23% Similarity=0.248 Sum_probs=143.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC----------cc--hhhhhhhcCCCCceEEEEcCCCC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS----------PK--TEHLRELDGATERLHLFKANLLE 69 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~----------~~--~~~~~~~~~~~~~~~~~~~D~~~ 69 (232)
|...+++|++|||||+||||++++++|+++|++|++++|+.+. .. .+..+.+.....++.++++|++|
T Consensus 5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 84 (277)
T 3tsc_A 5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD 84 (277)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 4556889999999999999999999999999999999995321 11 12222333335678999999999
Q ss_pred cchHHHhhc-------CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccce
Q 026852 70 EGSFDSAVD-------GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGA 133 (232)
Q Consensus 70 ~~~~~~~~~-------~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~ 133 (232)
.+++.++++ ++|++|||||... +.+.+.+++.+++|+.+++++++++.+.+ + .++||++||..+
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 164 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG 164 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence 999998876 5899999998532 35667889999999999999999988864 2 469999999977
Q ss_pred eccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 134 MLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
..+.+. ...|+.||.+.+.+++.++.+ +||++++|+||+|.||+..
T Consensus 165 ~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 213 (277)
T 3tsc_A 165 MKMQPF----------------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS 213 (277)
T ss_dssp TSCCSS----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS
T ss_pred CCCCCC----------------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc
Confidence 654332 245999999999999999887 4899999999999999753
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=211.59 Aligned_cols=177 Identities=19% Similarity=0.125 Sum_probs=143.2
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
|+...+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.. ...++.++++|++|.+++.++++
T Consensus 1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLR-AAESALRQRFPGARLFASVCDVLDALQVRAFAE 79 (265)
T ss_dssp --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHH
Confidence 3445689999999999999999999999999999999999875433 22233322 23458999999999999988875
Q ss_pred -------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCC
Q 026852 79 -------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 -------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 155 (265)
T 3lf2_A 80 ACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH---- 155 (265)
T ss_dssp HHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC----
Confidence 679999999853 234567789999999999999999998864 3578999999977654332
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|.||+.
T Consensus 156 ------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (265)
T 3lf2_A 156 ------------------MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQW 197 (265)
T ss_dssp ------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred ------------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchh
Confidence 2559999999999999998874 89999999999999864
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=212.40 Aligned_cols=173 Identities=17% Similarity=0.133 Sum_probs=143.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++.. .+..+++.....++.++++|++|.+++.++.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV--KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH--HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH--HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 3788999999999999999999999999999999976421 23444454556789999999999999888754
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----------- 174 (273)
T 3uf0_A 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN----------- 174 (273)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS-----------
T ss_pred CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC-----------
Confidence 7899999998532 34567889999999999999999987753 5589999999977654332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 175 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 217 (273)
T 3uf0_A 175 -----------VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTA 217 (273)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred -----------ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchh
Confidence 255999999999999999888 6999999999999998753
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=212.30 Aligned_cols=175 Identities=19% Similarity=0.162 Sum_probs=142.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|++|||||+||||++++++|+++|++|+++ +|+.+... +..+++.....++.++++|++|.++++++++
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAAL-ETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 457999999999999999999999999999987 67654322 3334444445689999999999999988876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+.|+..+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------- 150 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN---------- 150 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC----------
Confidence 569999999842 335667788999999999999999998763 4579999999977654332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|.||+....
T Consensus 151 ------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 195 (258)
T 3oid_A 151 ------------YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF 195 (258)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc
Confidence 2559999999999999999884 89999999999999976543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=213.30 Aligned_cols=177 Identities=14% Similarity=0.108 Sum_probs=142.7
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
|++.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.++++++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (260)
T 2z1n_A 1 MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLE-AAASRIASLVSGAQVDIVAGDIREPGDIDRLFEK 79 (260)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHH
Confidence 455588999999999999999999999999999999999875332 222222211 2268899999999999999886
Q ss_pred -----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 80 ~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 153 (260)
T 2z1n_A 80 ARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD------ 153 (260)
T ss_dssp HHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------
T ss_pred HHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC------
Confidence 589999999843 234566889999999999999999988753 4589999999976643221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+. ||++++|+||+++||+..
T Consensus 154 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 154 ----------------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp ----------------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence 2459999999999998888774 899999999999999865
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=211.78 Aligned_cols=173 Identities=19% Similarity=0.122 Sum_probs=144.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTA-AVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTH-HHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 478899999999999999999999999999999999987654 3334444445678999999999999998876
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.++++..+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~----------- 177 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV----------- 177 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC-----------
Confidence 689999999842 335667889999999999999999998753 4579999999976643221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|.||+.
T Consensus 178 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 219 (275)
T 4imr_A 178 -----------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRN 219 (275)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH
T ss_pred -----------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccc
Confidence 2459999999999999998874 89999999999999864
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=215.45 Aligned_cols=203 Identities=17% Similarity=0.173 Sum_probs=156.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
|+||||||+|+||++++++|+++ |++|++++|++... ... .+++++++|++|.+++.++++ ++|+||
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~-------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi 73 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT--DVV-------NSGPFEVVNALDFNQIEHLVEVHKITDIY 73 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC--HHH-------HSSCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc--ccc-------CCCceEEecCCCHHHHHHHHhhcCCCEEE
Confidence 68999999999999999999999 89999999987642 111 246789999999999999998 899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
|+||........+++..+++|+.++.++++++.+. +.+++|++||...+ +.... ..+.+|+....| ...
T Consensus 74 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~-~~~~~---~~~~~e~~~~~~------~~~ 142 (312)
T 2yy7_A 74 LMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVF-GPTTP---KENTPQYTIMEP------STV 142 (312)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGC-CTTSC---SSSBCSSCBCCC------CSH
T ss_pred ECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHh-CCCCC---CCCccccCcCCC------Cch
Confidence 99986533223556788999999999999999886 77899999998554 32211 123334332222 356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|+.+|.++|.+++.++.+++++++++||++++||...+.. ......+.+.+.+. .++++.+.++|+|
T Consensus 143 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (312)
T 2yy7_A 143 YGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY 215 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence 9999999999999998888999999999999998754322 22344444544444 5778889999987
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=213.72 Aligned_cols=171 Identities=18% Similarity=0.139 Sum_probs=141.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+++... +..+++ ..++.++++|++|.+++.++++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD-AAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999875432 222333 4568899999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.+.+++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------- 171 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG--------- 171 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---------
Confidence 6899999999532 34567889999999999999999998853 4579999999977654332
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 172 -------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 213 (277)
T 3gvc_A 172 -------------TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ 213 (277)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH
Confidence 255999999999999998887 589999999999999863
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=218.31 Aligned_cols=214 Identities=21% Similarity=0.207 Sum_probs=159.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++|+||||||+|+||++++++|+++| ++|++++|++.... + .+. ...+++++++|++|.+++.++++++|+||
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK-I---NVP-DHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG-G---GSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch-h---hcc-CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 577899999999999999999999999 99999999875432 1 111 13578999999999999999999999999
Q ss_pred Eccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccc--cCCCCChhhcccc
Q 026852 85 HTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVID--ETWFSNPVLCKEN 161 (232)
Q Consensus 85 ~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~--e~~~~~~~~~~~~ 161 (232)
|+||.... .+.+++.+.+++|+.++.++++++.+..+.++||++||.. .|+... ..+.+ |+.+..+. ...
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~-vyg~~~----~~~~~~~E~~~~~~~--~~~ 177 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC-SIAEKT----FDDAKATEETDIVSL--HNN 177 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-------------------CCCCCCCS--SCC
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH-HcCCCC----CCCcCcccccccccc--cCC
Confidence 99986432 2234567899999999999999997742568999999984 444322 22333 44321010 012
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC---------CCC---CcchHHHHHHHHcCC---CCCCccce
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF---------QPI---LNFGAEVILNLINGN---IYSAAIQD 226 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~---------~~~---~~~~~~~~~~~~~~~---~~~~~~~~ 226 (232)
...|+.+|.++|.+++.++.+++++++++|||+|+||.. ... ......++.....+. +++++.+.
T Consensus 178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~ 257 (377)
T 2q1s_A 178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT 257 (377)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence 356999999999999999888899999999999999986 321 234556666677776 57788899
Q ss_pred eeeec
Q 026852 227 RIMIY 231 (232)
Q Consensus 227 ~~~~~ 231 (232)
++|+|
T Consensus 258 ~~~i~ 262 (377)
T 2q1s_A 258 RDFIF 262 (377)
T ss_dssp ECCEE
T ss_pred EeeEE
Confidence 99987
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-30 Score=214.78 Aligned_cols=213 Identities=20% Similarity=0.267 Sum_probs=159.4
Q ss_pred EEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 10 VVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
+||||||+||||++++++|++. |++|++++|+......+.+..+.. ..+++++++|++|.+++.++++ ++|+|||+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE-SNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 6999999999999999999998 799999999763211122322221 3578999999999999999998 89999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhC-Ccc-------EEEEecccceeccCCCC------CCCccccccCC
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIK-------RVVLTSSIGAMLLNETP------MTPDVVIDETW 151 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-------~iv~vSS~~~~~~~~~~------~~~~~~~~e~~ 151 (232)
||.... .+.++++..+++|+.++.++++++.+.+ +.+ +||++||... ++.... ..+..+.+|+.
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v-~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV-YGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG-GCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHH-hCCCcccccccccccCCCCCCCC
Confidence 986432 2234567899999999999999998863 334 9999999844 332210 00000334433
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceee
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRI 228 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 228 (232)
... ....|+.||.++|.+++.++.+++++++++|||+|+||..... .....++...+.+. +++++.+.++
T Consensus 160 ~~~------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (361)
T 1kew_A 160 AYA------PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRD 232 (361)
T ss_dssp CCC------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred CCC------CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEe
Confidence 222 2356999999999999999988899999999999999986432 23455666666665 5688889999
Q ss_pred eec
Q 026852 229 MIY 231 (232)
Q Consensus 229 ~~~ 231 (232)
|+|
T Consensus 233 ~i~ 235 (361)
T 1kew_A 233 WLY 235 (361)
T ss_dssp EEE
T ss_pred eEE
Confidence 987
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=208.57 Aligned_cols=167 Identities=20% Similarity=0.234 Sum_probs=139.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.+... ..++.++++|++|++++.++++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------DPDIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------STTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------cCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 57899999999999999999999999999999999876432 1368899999999999998887
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.+++++.+++|+.|+.++++++.+.+ +.++||++||..+..+...
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 164 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG----------- 164 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC-----------
Confidence 789999999853 234567889999999999999999987643 5689999999865432211
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
.....|+.||.+.+.+++.++.++ ||++++|+||+|+||+...
T Consensus 165 ---------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 210 (260)
T 3un1_A 165 ---------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA 210 (260)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence 012459999999999999999986 8999999999999998643
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=207.98 Aligned_cols=169 Identities=17% Similarity=0.120 Sum_probs=138.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
.+|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++ +
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQ-QQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4589999999999999999999999999999999875432 222333 2358999999999999988876 5
Q ss_pred CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 80 CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 80 ~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 144 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKAN------------- 144 (235)
T ss_dssp CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSS-------------
T ss_pred CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCC-------------
Confidence 79999999953 234567889999999999999999998864 2349999999977654332
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++..
T Consensus 145 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 187 (235)
T 3l6e_A 145 ---------ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD 187 (235)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh
Confidence 255999999999999999987 4899999999999999854
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-31 Score=212.33 Aligned_cols=174 Identities=18% Similarity=0.117 Sum_probs=138.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC-cchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|+++. .. +..+++... ..++.++++|++|.+++.++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE-KVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHH-HHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHH-HHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 567999999999999999999999999999999998753 22 222222211 3468899999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 151 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN--------- 151 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC---------
Confidence 6899999998532 24567789999999999999999998754 4589999999977654322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+...
T Consensus 152 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (260)
T 1x1t_A 152 -------------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK 195 (260)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH
Confidence 255999999999999998887 48999999999999998543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=210.60 Aligned_cols=172 Identities=16% Similarity=0.102 Sum_probs=141.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------- 77 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------- 77 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|++++++++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-DCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68899999999999999999999999999999999875332 223333333457889999999999998887
Q ss_pred cCCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 78 DGCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 78 ~~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.++|++|||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 155 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY---------- 155 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC----------
Confidence 4689999999953 234566788999999999999999997753 4589999999876543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||.++||+.
T Consensus 156 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 197 (260)
T 2ae2_A 156 ------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV 197 (260)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHH
T ss_pred ------------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcch
Confidence 2459999999999999998874 89999999999999864
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=213.02 Aligned_cols=177 Identities=16% Similarity=0.124 Sum_probs=143.4
Q ss_pred CCCCCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc
Q 026852 1 MMSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
||..++++|++|||||+ ||||++++++|+++|++|++++|+++ . .+.++++......+.++++|++|.++++++++
T Consensus 1 M~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-L-RPEAEKLAEALGGALLFRADVTQDEELDALFA 78 (261)
T ss_dssp CEEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-G-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-H-HHHHHHHHHhcCCcEEEECCCCCHHHHHHHHH
Confidence 55667889999999999 99999999999999999999999874 1 12333332212247899999999999988876
Q ss_pred -------CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCC
Q 026852 79 -------GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 79 -------~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~ 141 (232)
++|+||||||... +.+.+++++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-- 156 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-- 156 (261)
T ss_dssp HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT--
T ss_pred HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC--
Confidence 6799999998532 345677889999999999999999998752 369999999866544322
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|+||+..
T Consensus 157 --------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 199 (261)
T 2wyu_A 157 --------------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR 199 (261)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGG
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhh
Confidence 2459999999999999988874 999999999999999754
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-30 Score=210.54 Aligned_cols=176 Identities=19% Similarity=0.132 Sum_probs=142.5
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch------hhhhhhcCCCCceEEEEcCCCCcchHHHh
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (232)
++.+++|++|||||+||||++++++|+++|++|++++|+.++... +..+++.....++.++++|++|.++++++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 455889999999999999999999999999999999999864321 22333333356899999999999999988
Q ss_pred hc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCC
Q 026852 77 VD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 77 ~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++ ++|++|||||.. .+.+.+.+++++++|+.+++++++++.+.+ +.++||++||..+..+...
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-- 161 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL-- 161 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS--
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC--
Confidence 76 789999999953 234567789999999999999999999975 3479999999876644211
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccC-ceeCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPG-TVIGPF 199 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg-~v~g~~ 199 (232)
....|+.||++.+.+++.++.+ +||++++|+|| .+.|++
T Consensus 162 -------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~ 204 (285)
T 3sc4_A 162 -------------------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA 204 (285)
T ss_dssp -------------------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH
T ss_pred -------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH
Confidence 1255999999999999999888 58999999999 577764
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-31 Score=211.11 Aligned_cols=172 Identities=21% Similarity=0.161 Sum_probs=143.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK-AAAASI---GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999875432 222333 4578999999999999998876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ + .++||++||..+..+.+.
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 149 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN-------- 149 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT--------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC--------
Confidence 689999999953 235667889999999999999999987753 2 579999999977765432
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.|++..
T Consensus 150 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 192 (247)
T 3rwb_A 150 --------------MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVK 192 (247)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred --------------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccc
Confidence 255999999999999998887 5999999999999998643
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=214.84 Aligned_cols=172 Identities=18% Similarity=0.181 Sum_probs=143.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.....++.++++|++|.+++.++++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALE-QAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 67899999999999999999999999999999999875433 3333444445679999999999999998876
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.. .+.+.+++++.+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 177 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG---------- 177 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT----------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC----------
Confidence 789999999953 235667889999999999999999998753 2 469999999977754332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|.|++.
T Consensus 178 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 219 (301)
T 3tjr_A 178 ------------LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV 219 (301)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc
Confidence 2559999999999999988874 89999999999999874
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=213.55 Aligned_cols=181 Identities=18% Similarity=0.230 Sum_probs=139.9
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+..+.+|++|||||+||||++++++|+++|++|++++|+.........+.......++.++++|++|.+++.++++
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 80 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM 80 (264)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 55556779999999999999999999999999999998886533222223333334679999999999999998876
Q ss_pred ----CCCEEEEcccc--c-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 ----GCDGVFHTASP--V-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ----~~d~vi~~Ag~--~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||. . .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||.......+.
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~----- 155 (264)
T 3i4f_A 81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW----- 155 (264)
T ss_dssp HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC-----
T ss_pred HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC-----
Confidence 78999999993 1 234556788999999999999999997653 4579999998833211110
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
.....|+.||++.+.+++.++.+ +||++++|+||+|+||+...
T Consensus 156 ---------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 201 (264)
T 3i4f_A 156 ---------------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA 201 (264)
T ss_dssp ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC
T ss_pred ---------------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh
Confidence 01245999999999999999887 69999999999999998653
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=209.95 Aligned_cols=176 Identities=18% Similarity=0.174 Sum_probs=145.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE-KFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999875432 2333343335678999999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 150 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG---------- 150 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC----------
Confidence 4799999999542 34567789999999999999999988753 4479999999977765432
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+.+.+++.++.+ +||++++++||++.|++.+..
T Consensus 151 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 195 (247)
T 3lyl_A 151 ------------QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL 195 (247)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence 255999999999999998887 589999999999999987553
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=210.29 Aligned_cols=177 Identities=16% Similarity=0.147 Sum_probs=140.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++++.........+++.....++.++++|++|.++++++++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999986654433223444454445678999999999999998886
Q ss_pred --CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEeccccee-ccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAM-LLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~-~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+. .++||++||..+. .+.+.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------- 154 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG--------- 154 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT---------
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC---------
Confidence 679999999843 2345567789999999999999999999753 3699999998765 22221
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+. +|++++|+||+|.|++...
T Consensus 155 -------------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~ 197 (259)
T 3edm_A 155 -------------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDT 197 (259)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccc
Confidence 2459999999999999998884 4999999999999997643
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=217.20 Aligned_cols=195 Identities=17% Similarity=0.223 Sum_probs=155.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHC-CC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQR-GY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.++++|+||||||+|+||++++++|+++ |+ +|++++|++.+.. ...+.+. ..++.++.+|++|.+++.++++++|
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~-~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D 93 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS-EMAMEFN--DPRMRFFIGDVRDLERLNYALEGVD 93 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHH-HHHHHHC--CTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHH-HHHHHhc--CCCEEEEECCCCCHHHHHHHHhcCC
Confidence 5578899999999999999999999999 97 9999999864321 1222222 2578999999999999999999999
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||+||.... ..+..+.+.+++|+.|+.++++++.+. +.+++|++||.....+
T Consensus 94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~p------------------------ 148 (344)
T 2gn4_A 94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAANP------------------------ 148 (344)
T ss_dssp EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSSC------------------------
T ss_pred EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCCC------------------------
Confidence 99999986431 123446789999999999999999997 7899999999754422
Q ss_pred cchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++.+ .|++++++|||+|+||.. ..++.++.....++ .+.++.+.|+|+|
T Consensus 149 -~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~ 220 (344)
T 2gn4_A 149 -INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWIT 220 (344)
T ss_dssp -CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEEC
T ss_pred -ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEE
Confidence 145999999999999888764 589999999999999873 23444555555554 3457888899886
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=208.80 Aligned_cols=170 Identities=16% Similarity=0.137 Sum_probs=141.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+++ ....+++.....++.++++|++|.+++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999876 23334443334578899999999999999887
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 147 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG----------- 147 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC-----------
Confidence 789999999853 224567788999999999999999987753 4589999999976644321
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||+++||+.
T Consensus 148 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 189 (255)
T 2q2v_A 148 -----------KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV 189 (255)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch
Confidence 255999999999999999887 489999999999999874
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=213.42 Aligned_cols=173 Identities=18% Similarity=0.151 Sum_probs=142.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhc----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.++++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++. ....++.++++|++|.++++++++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVL-TAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999999875432 2222222 124678999999999999988876
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+...
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 173 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL-------- 173 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT--------
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC--------
Confidence 689999999842 335677889999999999999999998764 3479999999977765432
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+|++
T Consensus 174 --------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 214 (277)
T 4fc7_A 174 --------------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTE 214 (277)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSH
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecch
Confidence 245999999999999998887 48999999999999985
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=209.18 Aligned_cols=184 Identities=18% Similarity=0.146 Sum_probs=143.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d 81 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.+++.++++ ++|
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGE-AAARTM---AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 378899999999999999999999999999999999975432 222222 4679999999999999999988 459
Q ss_pred EEEEcccccc---cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 82 GVFHTASPVI---FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 82 ~vi~~Ag~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
++|||||... ..+.+.++.++++|+.++.++++++.+.+ .+|||++||..+..+... .....++..+.
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~----~~~~~~~~~~~---- 159 (291)
T 3rd5_A 89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRIN----LEDLNWRSRRY---- 159 (291)
T ss_dssp EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCC----SSCTTCSSSCC----
T ss_pred EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCC----cccccccccCC----
Confidence 9999999643 24678889999999999999999999984 569999999977654322 11111111111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhc---C--CcEEEEccCceeCCCCCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKEN---G--IDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~---~--i~~~~v~pg~v~g~~~~~ 202 (232)
.....|+.||.+.+.+++.++.++ | |++++|+||+|.|++.+.
T Consensus 160 -~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~ 207 (291)
T 3rd5_A 160 -SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA 207 (291)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc
Confidence 112559999999999999988874 5 999999999999998754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=211.35 Aligned_cols=173 Identities=18% Similarity=0.159 Sum_probs=138.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------- 77 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------- 77 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.+++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999875332 223333333457899999999999998887
Q ss_pred cCCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 78 DGCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 78 ~~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.++|++|||||... +.+.++++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------- 167 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS---------- 167 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT----------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC----------
Confidence 46899999998532 24456788999999999999999998753 4589999999977644222
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+++||+..
T Consensus 168 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 210 (273)
T 1ae1_A 168 ------------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE 210 (273)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhh
Confidence 2559999999999999988874 999999999999999854
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=212.13 Aligned_cols=171 Identities=18% Similarity=0.201 Sum_probs=141.8
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
++.+++|++|||||+||||++++++|+++|++|++++|+++... +..+++ ..++.++++|++|.++++++++
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV-RVANEI---GSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999875332 222222 4578899999999999988876
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 169 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD-------- 169 (277)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT--------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC--------
Confidence 689999999953 234567889999999999999999998864 3469999999977654322
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.++ ||++++|+||+|+||+
T Consensus 170 --------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 210 (277)
T 4dqx_A 170 --------------RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY 210 (277)
T ss_dssp --------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred --------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence 2559999999999999998874 8999999999999987
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=216.64 Aligned_cols=175 Identities=18% Similarity=0.156 Sum_probs=137.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.. ...++.++++|++|.+++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSID-KALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999976433 22223322 12378999999999999998876
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---------CccEEEEecccceeccCCCCC
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---------SIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++|+||||||.. ...+.+++++.+++|+.|+.++++++.+.+ +.++||++||..+..+.+.
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~-- 161 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS-- 161 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS--
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC--
Confidence 569999999943 334567788999999999999999998864 2568999999987755332
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+...
T Consensus 162 --------------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 205 (319)
T 3ioy_A 162 --------------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS 205 (319)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------
T ss_pred --------------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccc
Confidence 255999999888888877766 48999999999999987643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=213.14 Aligned_cols=181 Identities=19% Similarity=0.178 Sum_probs=143.7
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc---------c--hhhhhhhcCCCCceEEEEcCCCCcch
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP---------K--TEHLRELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~---------~--~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.... + .+..+.+.....++.++++|++|.++
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 347899999999999999999999999999999999984211 0 11222223335679999999999999
Q ss_pred HHHhhc-------CCCEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCC
Q 026852 73 FDSAVD-------GCDGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 73 ~~~~~~-------~~d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~ 140 (232)
++++++ ++|++|||||.... ...++|++.+++|+.+++++++++.+.+ ..++||++||..+..+....
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 168 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA 168 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence 999886 78999999996432 3457789999999999999999998864 24799999999776543210
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
.+. ...|+.||++.+.+++.++.+ +||++++|+||+|+||+...
T Consensus 169 -------------~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 215 (278)
T 3sx2_A 169 -------------DPG-----SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN 215 (278)
T ss_dssp -------------SHH-----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred -------------CCC-----chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence 111 245999999999999999887 47999999999999998653
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=212.24 Aligned_cols=175 Identities=19% Similarity=0.235 Sum_probs=144.2
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
|.+.+++|++|||||+||||++++++|+++|++|++++|+++... +..+++.. ....+.++++|+++.++++++++
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVN-ETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh
Confidence 667789999999999999999999999999999999999875432 22333321 13567899999999999988876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 153 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE--------- 153 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT---------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc---------
Confidence 689999999953 234567788999999999999999988863 5689999999977654332
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.+. ||++++|+||.+.||+
T Consensus 154 -------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 194 (267)
T 3t4x_A 154 -------------MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG 194 (267)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc
Confidence 2559999999999999999874 7999999999999984
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=210.25 Aligned_cols=172 Identities=20% Similarity=0.191 Sum_probs=128.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.....++.++++|++|.++++++++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAE-AVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999875432 2333444445688999999999999998876
Q ss_pred --CCCEEEEccccc--------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 --GCDGVFHTASPV--------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 --~~d~vi~~Ag~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. ...+.+.+++.+++|+.++.++++++.+.+ +.++||++||..++.+
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 154 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY--------- 154 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC---------
Confidence 789999999862 124556788999999999999999987763 4579999999966521
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ||++++++||+++||+..
T Consensus 155 ----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 197 (253)
T 3qiv_A 155 ----------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANR 197 (253)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchh
Confidence 1339999999999999999885 899999999999999754
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=211.35 Aligned_cols=176 Identities=17% Similarity=0.158 Sum_probs=135.9
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhc
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
|+..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++. ....++.++++|++|.+++.++++
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLE-KVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK 79 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHH-HHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence 666788999999999999999999999999999999999875433 2222221 122678899999999999988876
Q ss_pred -------CCCEEEEccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 -------GCDGVFHTASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 -------~~d~vi~~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||.... .+.+.+++.+++|+.+++++++++.+.+ +.++||++||..+..+...
T Consensus 80 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----- 154 (250)
T 3nyw_A 80 DIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD----- 154 (250)
T ss_dssp HHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC-----
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC-----
Confidence 57999999996422 3346678999999999999999998753 4579999999977754321
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++.
T Consensus 155 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 196 (250)
T 3nyw_A 155 -----------------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA 196 (250)
T ss_dssp -----------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH
T ss_pred -----------------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh
Confidence 245999999999999998887 489999999999999864
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=210.68 Aligned_cols=177 Identities=22% Similarity=0.218 Sum_probs=140.9
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC-------CceEEEEcCCCCcchHH
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-------ERLHLFKANLLEEGSFD 74 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~ 74 (232)
|...+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.... .++.++++|++|.+++.
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 79 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQ-ETVRLLGGPGSKEGPPRGNHAAFQADVSEARAAR 79 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTC------------CCEEEECCTTSHHHHH
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhcCccccccCcceEEEEecCCCHHHHH
Confidence 555688899999999999999999999999999999999875322 2222222212 56889999999999998
Q ss_pred HhhcC-------C-CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccC
Q 026852 75 SAVDG-------C-DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLN 137 (232)
Q Consensus 75 ~~~~~-------~-d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~ 137 (232)
+++++ + |+||||||... +.+.+.++..+++|+.++.++++++.+.+ + .++||++||..+..+.
T Consensus 80 ~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 159 (264)
T 2pd6_A 80 CLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN 159 (264)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC
T ss_pred HHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC
Confidence 88764 4 99999998532 24566788999999999999999998863 2 4799999998776543
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+. ...|+.||.+.+.+++.++.+ +|+++++++||+++||+..
T Consensus 160 ~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 204 (264)
T 2pd6_A 160 VG----------------------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ 204 (264)
T ss_dssp TT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--
T ss_pred CC----------------------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh
Confidence 22 255999999999999998887 6999999999999999754
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=220.19 Aligned_cols=220 Identities=17% Similarity=0.147 Sum_probs=157.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc---------------hhhhhhhc-CCCCceEEEEcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK---------------TEHLRELD-GATERLHLFKANLL 68 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~---------------~~~~~~~~-~~~~~~~~~~~D~~ 68 (232)
+.++++||||||+||||++++++|+++|++|++++|+..... .+.+.... ....+++++++|++
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 467789999999999999999999999999999988642110 00111110 01346889999999
Q ss_pred CcchHHHhhcC--CCEEEEccccccc-CCCCc---hhhhhHHHHHHHHHHHHHHHhhCCc-cEEEEecccceeccCCCCC
Q 026852 69 EEGSFDSAVDG--CDGVFHTASPVIF-LSDNP---QADIVDPAVMGTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 69 ~~~~~~~~~~~--~d~vi~~Ag~~~~-~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~vSS~~~~~~~~~~~ 141 (232)
|.+++.+++++ +|+|||+||.... ....+ +...+++|+.++.++++++.+. +. ++||++||.. .++...
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V~~SS~~-vyg~~~-- 163 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMG-EYGTPN-- 163 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGG-GGCCCS--
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEEEeCcHH-HhCCCC--
Confidence 99999999987 9999999986432 11122 2458899999999999999887 55 5999999984 444322
Q ss_pred CCccccccCCCCCh--------hhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC----------
Q 026852 142 TPDVVIDETWFSNP--------VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI---------- 203 (232)
Q Consensus 142 ~~~~~~~e~~~~~~--------~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~---------- 203 (232)
.+.+|+.+... ..+......|+.||.++|.+++.++.++|++++++|||+|+||.....
T Consensus 164 ---~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~ 240 (404)
T 1i24_A 164 ---IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRL 240 (404)
T ss_dssp ---SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCC
T ss_pred ---CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccc
Confidence 11222211000 001122356999999999999998888899999999999999986431
Q ss_pred ------CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 204 ------LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 204 ------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
......++.+...++ +++++.+.|+|+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 277 (404)
T 1i24_A 241 DYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLD 277 (404)
T ss_dssp CCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEE
Confidence 134566777777777 5688999999997
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=212.65 Aligned_cols=172 Identities=16% Similarity=0.110 Sum_probs=142.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|++++.. +..+++.. ...++.++++|++|.++++++++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD-AARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 68899999999999999999999999999999999875433 22223322 24678999999999999988876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ + .++||++||..+..+.+.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 167 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--------- 167 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC---------
Confidence 789999999953 234567789999999999999999998864 2 469999999977654332
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 168 -------------~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 209 (266)
T 4egf_A 168 -------------HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMG 209 (266)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHH
T ss_pred -------------ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchh
Confidence 255999999999999999887 489999999999999864
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=210.80 Aligned_cols=173 Identities=20% Similarity=0.223 Sum_probs=138.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh---cCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL---DGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ .....++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE-ETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999875332 222233 2234578999999999999999887
Q ss_pred ---CCCEEEEcccccc-----cC----CCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccce-eccCCCCCCC
Q 026852 79 ---GCDGVFHTASPVI-----FL----SDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGA-MLLNETPMTP 143 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~-~~~~~~~~~~ 143 (232)
++|++|||||... +. +.+.++..+++|+.++.++++++.+.+ ..++||++||..+ ..+.+.
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 158 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD---- 158 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT----
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCC----
Confidence 7899999998532 12 556788999999999999999998864 1289999999876 433221
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+..
T Consensus 159 ------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 201 (278)
T 1spx_A 159 ------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGS 201 (278)
T ss_dssp ------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred ------------------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcccc
Confidence 245999999999999998876 5999999999999999754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=208.25 Aligned_cols=172 Identities=24% Similarity=0.245 Sum_probs=135.4
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
++.+++|++|||||+||||++++++|+++|++|++++|+.+ +..+++ ..++.++++|++|.+++.++++
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE----DVVADL---GDRARFAAADVTDEAAVASALDLAET 76 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH----HHHHHT---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH----HHHHhc---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999543 223333 4578999999999999998886
Q ss_pred --CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-----------CccEEEEecccceecc
Q 026852 79 --GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-----------SIKRVVLTSSIGAMLL 136 (232)
Q Consensus 79 --~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~iv~vSS~~~~~~ 136 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tl3_A 77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156 (257)
T ss_dssp HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence 7899999999532 25567889999999999999999998863 2368999999977643
Q ss_pred CCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 137 NETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
.+. ...|+.||.+.+.+++.++.+ +||++++|+||+|.||+....
T Consensus 157 ~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 204 (257)
T 3tl3_A 157 QIG----------------------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL 204 (257)
T ss_dssp HHH----------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred CCC----------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence 211 245999999999999998887 489999999999999987543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=212.63 Aligned_cols=177 Identities=21% Similarity=0.160 Sum_probs=143.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+.+++|++|||||+||||++++++|+++|++|++++|+.........+.+.....++.++++|++|.+++.++++
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 347889999999999999999999999999999999965433222333333345689999999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.+++++.+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 175 (271)
T 4iin_A 105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG--------- 175 (271)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---------
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC---------
Confidence 7899999999542 24567789999999999999999998863 4579999999977765432
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||++.|++...
T Consensus 176 -------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 219 (271)
T 4iin_A 176 -------------QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN 219 (271)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----
T ss_pred -------------chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh
Confidence 255999999999999999887 58999999999999997543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=209.53 Aligned_cols=204 Identities=17% Similarity=0.245 Sum_probs=156.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||+||||++++++|+++|++|++++|+..... +.+ ..+++++++|++|.+++.++++ ++|+|||+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~ 74 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE----DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHF 74 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch----hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 58999999999999999999999999999999765422 112 1268899999999999999998 89999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||.... .+.++++..+++|+.++.++++++.+. +.+++|++||... ++... ..+.+|+....+ ...|
T Consensus 75 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~-~~~~~----~~~~~E~~~~~~------~~~Y 142 (330)
T 2c20_A 75 AADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAAT-YGEVD----VDLITEETMTNP------TNTY 142 (330)
T ss_dssp CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGG-GCSCS----SSSBCTTSCCCC------SSHH
T ss_pred CcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCcee-eCCCC----CCCCCcCCCCCC------CChH
Confidence 986432 123456789999999999999999886 7789999999854 44322 234555543322 3569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-------CcchHHHHHHHHcCC-----CCC------Ccccee
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGN-----IYS------AAIQDR 227 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-------~~~~~~~~~~~~~~~-----~~~------~~~~~~ 227 (232)
+.+|.++|.+++.++.+++++++++||++++||..... .......+.+...+. +++ ++.+.|
T Consensus 143 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 222 (330)
T 2c20_A 143 GETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIR 222 (330)
T ss_dssp HHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeE
Confidence 99999999999999888899999999999999974221 122333444433322 333 688999
Q ss_pred eeec
Q 026852 228 IMIY 231 (232)
Q Consensus 228 ~~~~ 231 (232)
+|+|
T Consensus 223 ~~v~ 226 (330)
T 2c20_A 223 DYIH 226 (330)
T ss_dssp CEEE
T ss_pred eeEe
Confidence 9987
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=211.35 Aligned_cols=186 Identities=19% Similarity=0.180 Sum_probs=144.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc-------h----hhhhhhcCCCCceEEEEcCCCCcchH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-------T----EHLRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-------~----~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
.+++|++|||||+||||++++++|+++|++|++++|+..... . +...++.....++.++++|++|.+++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 378899999999999999999999999999999999843110 1 11222333356899999999999999
Q ss_pred HHhhc-------CCCEEEEccccccc---CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCC
Q 026852 74 DSAVD-------GCDGVFHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~ 142 (232)
.++++ ++|++|||||.... .+.+.+++.+++|+.+++++++++.+.+ ..++||++||..+..+....
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-- 164 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP-- 164 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc--
Confidence 88876 78999999996432 4567889999999999999999999986 34699999998776543210
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
+..+. .+.+ ....|+.||.+.+.+++.++.++ ||++++|+||+|+||+..
T Consensus 165 ---~~~~~-~~~~-----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 217 (287)
T 3pxx_A 165 ---PGAGG-PQGP-----GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN 217 (287)
T ss_dssp ---C------CHH-----HHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred ---ccccc-cCCC-----ccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence 00000 0011 12459999999999999998884 999999999999999864
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=212.45 Aligned_cols=172 Identities=20% Similarity=0.218 Sum_probs=137.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++ ..++.++++|++|.++++++++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK-EIAADL---GKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 378899999999999999999999999999999999875332 222222 3578999999999999998876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.++|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---------- 169 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPG---------- 169 (266)
T ss_dssp TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------C----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCC----------
Confidence 7899999999542 24456789999999999999999988753 4579999999977755332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+...
T Consensus 170 ------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 213 (266)
T 3grp_A 170 ------------QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK 213 (266)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc
Confidence 255999999999999998887 48999999999999987543
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=208.89 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=140.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ .....++.++++|++|.+++.++++
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS-EAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999875332 222222 1113568899999999999988876
Q ss_pred ---CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccc-eeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIG-AMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~-~~~~~~~~~~~~~~ 146 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||.. +..+.+.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------- 168 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN------- 168 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS-------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC-------
Confidence 6899999998532 24556788999999999999999998753 457999999986 4433211
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||++.|++..
T Consensus 169 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 211 (267)
T 1vl8_A 169 ---------------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE 211 (267)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH
T ss_pred ---------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc
Confidence 245999999999999998887 4999999999999999753
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-29 Score=208.68 Aligned_cols=203 Identities=22% Similarity=0.243 Sum_probs=148.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|++++.. .+. ..+++++++|++|.+++.++++++|+|||+||
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ--RLA-----YLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG--GGG-----GGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh--hhc-----cCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 58999999999999999999999999999999876432 111 13678999999999999999999999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
... ...+++++.+++|+.++.++++++.+. +.++||++||...+...... ..+ +|+....|... ....|+.+
T Consensus 87 ~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~---~~~-~E~~~~~p~~~--~~~~Y~~s 158 (342)
T 2x4g_A 87 YYP-SRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQG---LPG-HEGLFYDSLPS--GKSSYVLC 158 (342)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTS---SCB-CTTCCCSSCCT--TSCHHHHH
T ss_pred cCc-CCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCC---CCC-CCCCCCCcccc--ccChHHHH
Confidence 643 234567889999999999999999997 78899999999654322110 122 44444333100 13569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCC-CCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF-QPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
|..+|.+++.++.+ |++++++|||+++||.. .+ . ...++.....+. ..- +.+.++|+|
T Consensus 159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~--~-~~~~~~~~~~~~~~~~-~~~~~~~i~ 218 (342)
T 2x4g_A 159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP--T-TGRVITAIGNGEMTHY-VAGQRNVID 218 (342)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC--S-TTHHHHHHHTTCCCEE-ECCEEEEEE
T ss_pred HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc--c-HHHHHHHHHcCCCccc-cCCCcceee
Confidence 99999999998877 99999999999999986 32 1 344555666665 211 667788876
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=212.34 Aligned_cols=174 Identities=17% Similarity=0.144 Sum_probs=141.9
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.+.... ...+.+.....++.++++|++|.++++++++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999987432111 2222233335678999999999999988875
Q ss_pred ---CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccc
Q 026852 79 ---GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.+.|++.+++|+.+++++++++.+.+. .++||++||..+..+.+.
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------- 195 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH--------- 195 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT---------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC---------
Confidence 6899999999532 245678899999999999999999999853 369999999977654322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.++ ||++++|+||+|+||+
T Consensus 196 -------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 196 -------------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence 2559999999999999998874 9999999999999986
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=208.86 Aligned_cols=173 Identities=18% Similarity=0.145 Sum_probs=138.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++.....++.++++|++|.+++.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR-AVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999875432 2333443345678999999999999988876
Q ss_pred CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 175 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD---------- 175 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT----------
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC----------
Confidence 479999999852 234567789999999999999999988753 5689999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +|+++++|+||.|.|++..
T Consensus 176 ------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 218 (262)
T 3rkr_A 176 ------------GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV 218 (262)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc
Confidence 255999999999999998887 5999999999999998754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=207.91 Aligned_cols=174 Identities=20% Similarity=0.173 Sum_probs=141.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVD-RTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999875332 2233333334578899999999999988876
Q ss_pred -CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.|++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 160 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN--------- 160 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC---------
Confidence 789999999853 224556788999999999999999988753 4579999999976643221
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++++||++.|++..
T Consensus 161 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 203 (260)
T 2zat_A 161 -------------LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ 203 (260)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch
Confidence 255999999999999998887 4899999999999999753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=209.14 Aligned_cols=172 Identities=17% Similarity=0.153 Sum_probs=139.7
Q ss_pred CCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|++|||||+ ||||++++++|+++|++|++++|++ +.. +.++++........++++|++|.++++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~-~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLK-GRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHH-HHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 778999999999 9999999999999999999999987 222 2333332211234789999999999988876
Q ss_pred --CCCEEEEccccccc----------CCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 --GCDGVFHTASPVIF----------LSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.... .+.+.++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 158 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------ 158 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC------
Confidence 57999999995431 45567889999999999999999999752 369999999876644322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|+||+..
T Consensus 159 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 201 (265)
T 1qsg_A 159 ----------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 201 (265)
T ss_dssp ----------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhh
Confidence 2459999999999999998874 899999999999999754
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-29 Score=210.30 Aligned_cols=210 Identities=20% Similarity=0.306 Sum_probs=158.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc-chHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi~~ 86 (232)
|+||||||+|+||++++++|+++ |++|++++|++.+.. .+. ...+++++++|++|. +.+.++++++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~ 74 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-----RFL-NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG-----GGT-TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH-----Hhh-cCCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence 47999999999999999999998 899999999875321 111 134789999999985 5688889999999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc-cccchh
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC-KENKEW 164 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~ 164 (232)
||.... ....++.+.+++|+.++.++++++.+. + +++|++||... ++... ..+.+|+....+..+ ......
T Consensus 75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v-~g~~~----~~~~~e~~~~~~~~~~~~~~~~ 147 (345)
T 2bll_A 75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEV-YGMCS----DKYFDEDHSNLIVGPVNKPRWI 147 (345)
T ss_dssp BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGG-GBTCC----CSSBCTTTCCCBCCCTTCGGGH
T ss_pred ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHH-cCCCC----CCCcCCcccccccCcccCcccc
Confidence 986432 112356788999999999999999887 5 89999999854 44332 223344433211000 012346
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-------CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|+.+|.++|.+++.++++++++++++|||+++||..... ......++.+.+.+. +++++.+.|+|+|
T Consensus 148 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 224 (345)
T 2bll_A 148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 224 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEE
T ss_pred cHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEE
Confidence 999999999999999888899999999999999986532 123456666677776 5678889999987
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=208.94 Aligned_cols=176 Identities=17% Similarity=0.191 Sum_probs=141.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
..++|++|||||+||||++++++|+++|++|+++++..........+++.....++.++++|++|.++++++++
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999988443332223344444445678999999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 159 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG---------- 159 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC----------
Confidence 6799999999542 24557788999999999999999987753 4579999999977765432
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +|+++++++||++.|++...
T Consensus 160 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 203 (256)
T 3ezl_A 160 ------------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA 203 (256)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred ------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc
Confidence 255999999999999998887 58999999999999987644
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-30 Score=203.04 Aligned_cols=173 Identities=19% Similarity=0.187 Sum_probs=139.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++. ....++.++++|++|.+++.++++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLE-KIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999999999999875433 2222222 224678999999999999999887
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ ..+++|++||..+..+.+.
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------------ 147 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY------------ 147 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT------------
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC------------
Confidence 6899999999532 24567789999999999999999998864 3468888888766644322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.+..+ .|+++++|+||++.|++...
T Consensus 148 ----------~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~ 189 (235)
T 3l77_A 148 ----------GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS 189 (235)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC
T ss_pred ----------cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc
Confidence 245999999999999988555 49999999999999998654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=207.45 Aligned_cols=175 Identities=20% Similarity=0.236 Sum_probs=141.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcC-CCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD-PNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+ +++.. +..+++.....++.++++|++|.+++.++++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID-ETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999998 54432 2333333334578999999999999999887
Q ss_pred --CCCEEEEcccc-c-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C--c---cEEEEecccceec-cCCCCC
Q 026852 79 --GCDGVFHTASP-V-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S--I---KRVVLTSSIGAML-LNETPM 141 (232)
Q Consensus 79 --~~d~vi~~Ag~-~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~---~~iv~vSS~~~~~-~~~~~~ 141 (232)
++|+||||||. . ...+.+.++..+++|+.++.++++++.+.+ + . ++||++||..+.. +.+.
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-- 160 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG-- 160 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT--
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC--
Confidence 79999999985 2 223445678899999999999999887753 1 2 7999999986654 2211
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+. |+++++++||+++||+...
T Consensus 161 --------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (258)
T 3afn_B 161 --------------------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD 204 (258)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence 2559999999999999988774 9999999999999998654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=209.21 Aligned_cols=173 Identities=20% Similarity=0.182 Sum_probs=140.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.++++++++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE-ASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999875332 222222211 4578899999999999998876
Q ss_pred ---CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 161 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN------- 161 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC-------
Confidence 6899999998532 23556789999999999999999887753 4589999999977644322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 162 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 203 (267)
T 1iy8_A 162 ---------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV 203 (267)
T ss_dssp ---------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred ---------------CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch
Confidence 255999999999999988887 489999999999999874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-30 Score=212.84 Aligned_cols=174 Identities=22% Similarity=0.210 Sum_probs=136.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhh----hcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE----LDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|++|++|||||+||||++++++|+++|++|++++|+......+.++. ......++.++++|++|.+++.++++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999854332222222 22224678999999999999999887
Q ss_pred ----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||.. .+.+.+++++.+++|+.|+.++++++.+.+ +.++||++||..+..+...
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~------- 155 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP------- 155 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS-------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC-------
Confidence 789999999943 345667889999999999999999997754 5689999999876533211
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
....|++||.+.+.+++.++.+ +||++++|+||.|.|+..
T Consensus 156 --------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 156 --------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp --------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 0255999999999999999888 599999999999997653
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-30 Score=207.01 Aligned_cols=176 Identities=18% Similarity=0.201 Sum_probs=141.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. ...+++.....++.++++|++|.+++.++++
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMAT-KAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999865332 2233333334578999999999999988876
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------- 159 (260)
T 3awd_A 89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP--------- 159 (260)
T ss_dssp SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC---------
Confidence 6899999998543 13345668899999999999999988753 4679999999866543221
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.....|+.||.+.+.+++.++.+ +|+++++++||+++||+..
T Consensus 160 -----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 160 -----------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204 (260)
T ss_dssp -----------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred -----------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence 01145999999999999999888 6999999999999999864
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-29 Score=209.53 Aligned_cols=213 Identities=17% Similarity=0.161 Sum_probs=161.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v 83 (232)
|++|+||||||+||||++++++|+++|++|++++|+++......++.+.. ..+++++++|++|.+++.+++++ +|+|
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccc-cCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 34689999999999999999999999999999999886543223333221 34689999999999999999885 6999
Q ss_pred EEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCc-cEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 84 FHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSI-KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 84 i~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
||+||.... .+.++++..+++|+.++.++++++.+. +. ++||++||... |+... ..+.+|.....+
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~v-yg~~~----~~~~~e~~~~~~------ 147 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEM-FGKVQ----EIPQTEKTPFYP------ 147 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGG-GCSCS----SSSBCTTSCCCC------
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhh-cCCCC----CCCCCccCCCCC------
Confidence 999996432 235678899999999999999999986 65 89999999954 44332 223344432222
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++.++++++.+++|.++++|...... ......+.+...+. .++++.+.|+|+|
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (345)
T 2z1m_A 148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGY 223 (345)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEE
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEE
Confidence 3569999999999999999888999999999999999854321 11233344455554 4577888899886
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-30 Score=207.24 Aligned_cols=170 Identities=19% Similarity=0.259 Sum_probs=140.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC--cchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS--PKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+|++|||||+||||++++++|+++|++|++++|+++. .. +..+++.....++.++++|++|.++++++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAA-ETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999998754 21 2333343335678999999999999988876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc-cEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI-KRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ +. ++||++||..+..+.+.
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 150 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI---------- 150 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC----------
Confidence 7899999998532 24567789999999999999999998863 44 89999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||++.||+.
T Consensus 151 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 192 (258)
T 3a28_C 151 ------------LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMW 192 (258)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHH
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhh
Confidence 245999999999999998887 489999999999999864
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=208.11 Aligned_cols=177 Identities=16% Similarity=0.129 Sum_probs=140.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch------hhhhhhcCCCCceEEEEcCCCCcchHHHhh
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.++... +..+++.....++.++++|++|.+++.+++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 45789999999999999999999999999999999999764321 222223333567899999999999998887
Q ss_pred c-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCC
Q 026852 78 D-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 78 ~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~ 142 (232)
+ ++|++|||||.. .+.+.+.+++++++|+.++.++++++.+.+ +.++||++||..+..+..
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 157 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---- 157 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH----
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----
Confidence 6 689999999953 235567889999999999999999998864 457999999986654310
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccC-ceeCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPG-TVIGPFF 200 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg-~v~g~~~ 200 (232)
......|+.||.+.+.+++.++.+ +||++++|+|| .+.|++.
T Consensus 158 ----------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~ 203 (274)
T 3e03_A 158 ----------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI 203 (274)
T ss_dssp ----------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---
T ss_pred ----------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh
Confidence 011245999999999999998887 48999999999 6888865
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-30 Score=208.87 Aligned_cols=172 Identities=17% Similarity=0.177 Sum_probs=140.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... .++.++++|++|.++++++++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACA-DTATRLSAY-GDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHHTTS-SCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhc-CceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999875332 233334332 378899999999999988876
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc----cEEEEecccceeccCCCCCCCccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI----KRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~----~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||.. .+.+.+.++..+++|+.++.++++++.+.+ +. ++||++||..+..+.+.
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~------- 177 (276)
T 2b4q_A 105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE------- 177 (276)
T ss_dssp CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC-------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC-------
Confidence 689999999853 234567789999999999999999988753 33 79999999976644322
Q ss_pred cccCCCCChhhccccch-hHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKE-WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~-~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.. .|+.||.+.+.+++.++.+ +||++++|+||++.|++..
T Consensus 178 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 221 (276)
T 2b4q_A 178 ---------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR 221 (276)
T ss_dssp ---------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH
T ss_pred ---------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh
Confidence 12 4999999999999998887 4999999999999999753
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=206.73 Aligned_cols=173 Identities=18% Similarity=0.154 Sum_probs=140.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCC--CCcchHHHhhc--
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANL--LEEGSFDSAVD-- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~-- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|+ +|.++++++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLR-QVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 3478999999999999999999999999999999999875433 222222221 23678999999 89998888776
Q ss_pred -----CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 -----GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 -----~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----- 161 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN----- 161 (252)
T ss_dssp HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT-----
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC-----
Confidence 689999999853 224456778999999999999999998753 4579999999977654332
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.++ .|++++|+||+|.|++
T Consensus 162 -----------------~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~ 201 (252)
T 3f1l_A 162 -----------------WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM 201 (252)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred -----------------CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence 2559999999999999999885 3999999999999976
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=211.96 Aligned_cols=172 Identities=18% Similarity=0.215 Sum_probs=141.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC---eEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc--
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
+++|++|||||+||||+++++.|+++|+ +|++++|+.+... +..+++.. ...++.++++|++|.++++++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLE-ELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHH-HHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 6789999999999999999999999998 9999999875433 22222221 24678999999999999999886
Q ss_pred -----CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 -----GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||... +.+.++|++.+++|+.|++++++++.+.+ +.++||++||..+..+.+.
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----- 184 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT----- 184 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC-----
Confidence 4799999999532 24567789999999999999999998753 4589999999977654332
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.|++.
T Consensus 185 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 226 (287)
T 3rku_A 185 -----------------GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS 226 (287)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHH
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccc
Confidence 255999999999999999998 589999999999999963
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-30 Score=207.92 Aligned_cols=164 Identities=21% Similarity=0.211 Sum_probs=138.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.+... ....++++|++|.+++.++++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------NVSDHFKIDVTNEEEVKEAVEKTTKK 78 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------TSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------CceeEEEecCCCHHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999875431 245788999999999998876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. ...+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 149 (269)
T 3vtz_A 79 YGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN--------- 149 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT---------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC---------
Confidence 689999999853 234567788999999999999999998853 4579999999977654332
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.++ +|++++|+||+|+||+.
T Consensus 150 -------------~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~ 190 (269)
T 3vtz_A 150 -------------AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMV 190 (269)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHH
T ss_pred -------------ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcch
Confidence 2559999999999999999886 89999999999999864
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=209.22 Aligned_cols=198 Identities=17% Similarity=0.116 Sum_probs=143.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCc-chHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEE-GSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~-~~~~~~~~---- 78 (232)
++++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++... ..++.++++|++|. +++..+++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGH-EAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999986443 333444332 35799999999998 77777665
Q ss_pred ---CCCEEEEcccccc-----------------------------------cCCCCchhhhhHHHHHHHHHHHHHHHhhC
Q 026852 79 ---GCDGVFHTASPVI-----------------------------------FLSDNPQADIVDPAVMGTLNVLRSCAKVH 120 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----------------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 120 (232)
++|+||||||... ..+.+.+++.+++|+.|+.++++++.+.+
T Consensus 88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l 167 (311)
T 3o26_A 88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL 167 (311)
T ss_dssp HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence 7899999999642 12345667889999999999999998864
Q ss_pred ---CccEEEEecccceeccCCCCCCCc-cccccCCCC--------------------ChhhccccchhHHHHHHHHHHHH
Q 026852 121 ---SIKRVVLTSSIGAMLLNETPMTPD-VVIDETWFS--------------------NPVLCKENKEWYSLAKTLAEEAA 176 (232)
Q Consensus 121 ---~~~~iv~vSS~~~~~~~~~~~~~~-~~~~e~~~~--------------------~~~~~~~~~~~y~~sK~~~~~~~ 176 (232)
+.++||++||..+..+........ ...++..+. ...........|+.||++.+.++
T Consensus 168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~ 247 (311)
T 3o26_A 168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247 (311)
T ss_dssp TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence 457999999997765532100000 000000000 00000011255999999999999
Q ss_pred HHHHHhc-CCcEEEEccCceeCCCCCCC
Q 026852 177 WKFAKEN-GIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 177 ~~~~~~~-~i~~~~v~pg~v~g~~~~~~ 203 (232)
+.++.++ ++++++|+||+|.|++....
T Consensus 248 ~~la~e~~~i~v~~v~PG~v~T~~~~~~ 275 (311)
T 3o26_A 248 RVLANKIPKFQVNCVCPGLVKTEMNYGI 275 (311)
T ss_dssp HHHHHHCTTSEEEEECCCSBCSGGGTTC
T ss_pred HHHHhhcCCceEEEecCCceecCCcCCC
Confidence 9999986 79999999999999987654
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-30 Score=206.43 Aligned_cols=169 Identities=17% Similarity=0.149 Sum_probs=138.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.+++.++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999874322 222222 3468899999999999998876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 147 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL---------- 147 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----------
Confidence 7899999998532 34566789999999999999998887753 4589999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+
T Consensus 148 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1hdc_A 148 ------------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM 188 (254)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc
Confidence 255999999999999998887 48999999999999975
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=208.52 Aligned_cols=173 Identities=18% Similarity=0.123 Sum_probs=139.5
Q ss_pred CCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|++|||||+ ||||+++++.|+++|++|++++|+++ . .+.++++.....++.++++|++|.+++.++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L-EKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 778999999999 99999999999999999999999874 1 12333332212247889999999999988876
Q ss_pred --CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC--ccEEEEecccceeccCCCCCCCcc
Q 026852 79 --GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS--IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 --~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+||||||... +.+.++++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 170 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH------ 170 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT------
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC------
Confidence 6799999998542 345567889999999999999999998752 379999999866644322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+...
T Consensus 171 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 214 (285)
T 2p91_A 171 ----------------YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS 214 (285)
T ss_dssp ----------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc
Confidence 245999999999999998887 49999999999999997543
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-30 Score=211.60 Aligned_cols=173 Identities=17% Similarity=0.169 Sum_probs=140.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCC---ceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~---- 78 (232)
+++|++|||||+||||+++++.|+++|++|++++|++++.. +..+++..... ++.++++|++|.+++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE-ETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999875432 22223322223 78999999999999988876
Q ss_pred ---CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccC-CCCCCCcc
Q 026852 79 ---GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLN-ETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~-~~~~~~~~ 145 (232)
++|+||||||.. .+.+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+. +.
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~------ 176 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG------ 176 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT------
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCC------
Confidence 689999999853 234566788999999999999999998864 12799999998765432 11
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 177 ----------------~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~ 219 (297)
T 1xhl_A 177 ----------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG 219 (297)
T ss_dssp ----------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHH
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccc
Confidence 245999999999999988876 5999999999999998743
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-30 Score=208.11 Aligned_cols=177 Identities=16% Similarity=0.180 Sum_probs=142.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.++++|++|||||+||||++++++|+++|++|++++|+..........+......++.++++|++|.++++++++
T Consensus 21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999998655332223333344445679999999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||... +.+.++++..+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 171 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG--------- 171 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---------
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC---------
Confidence 7899999999542 24556788999999999999999988753 4579999999877765432
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++...
T Consensus 172 -------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 215 (269)
T 3gk3_A 172 -------------QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA 215 (269)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC
T ss_pred -------------cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh
Confidence 255999999999999998887 48999999999999998643
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=204.66 Aligned_cols=165 Identities=16% Similarity=0.155 Sum_probs=136.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++ . +..+++. + .++++|++|.++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~-~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-K-EVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALG 76 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-H-HHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-H-HHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 678999999999999999999999999999999998864 2 3333332 3 789999999999888876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 145 (256)
T 2d1y_A 77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE----------- 145 (256)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC-----------
Confidence 6899999998532 23455778999999999999999998753 4589999999977654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.+ +||++++++||++.|++
T Consensus 146 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (256)
T 2d1y_A 146 -----------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA 186 (256)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred -----------ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence 255999999999999998887 48999999999999985
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-30 Score=208.77 Aligned_cols=178 Identities=17% Similarity=0.213 Sum_probs=136.8
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE-cCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
|..+.++|++|||||+||||++++++|+++|++|++++ |+.+.. ....+++.....++.++++|++|.++++++++
T Consensus 20 ~~~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (272)
T 4e3z_A 20 FQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAA-DAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV 98 (272)
T ss_dssp ----CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 44556789999999999999999999999999998874 444322 22333343345689999999999999988876
Q ss_pred -----CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC------CccEEEEecccceeccCCCCC
Q 026852 79 -----GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH------SIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+....
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~- 177 (272)
T 4e3z_A 99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ- 177 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT-
T ss_pred HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC-
Confidence 6799999999542 23567788999999999999999998863 24689999999777654320
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+. ||++++|+||+|+||+..
T Consensus 178 --------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 220 (272)
T 4e3z_A 178 --------------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHA 220 (272)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred --------------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccc
Confidence 2449999999999999998874 999999999999999754
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=208.33 Aligned_cols=173 Identities=15% Similarity=0.119 Sum_probs=140.8
Q ss_pred CCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
++++|++|||||+ ||||++++++|+++|++|++++|+++ .. +.++++.....++.++++|++|.+++.++++
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~-~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LE-KRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-TH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HH-HHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 3678999999999 99999999999999999999999975 22 2333332212247899999999999988876
Q ss_pred ---CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+.++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 154 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH------ 154 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC------
Confidence 5799999998542 345667889999999999999999999752 369999999876644322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|.|++..
T Consensus 155 ----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 197 (275)
T 2pd4_A 155 ----------------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS 197 (275)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred ----------------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhh
Confidence 2459999999999999988874 999999999999999754
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=207.74 Aligned_cols=175 Identities=20% Similarity=0.143 Sum_probs=141.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.+.......+++.....++.++++|++|.+++.++++
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999999999999987432222233333334578999999999999888765
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 173 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP------------ 173 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC------------
Confidence 6899999998532 24567889999999999999999999975 4579999999866543211
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
....|+.||.+.+.+++.++.+ +||++++|+||+|+|++.
T Consensus 174 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 216 (283)
T 1g0o_A 174 ---------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY 216 (283)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHH
T ss_pred ---------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhh
Confidence 0255999999999999998876 489999999999999863
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=201.90 Aligned_cols=173 Identities=18% Similarity=0.107 Sum_probs=139.4
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|.+.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ .+..++++|++|.+++.++++
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD-SLVREC----PGIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHS----TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc----CCCCEEEEeCCCHHHHHHHHHHcC
Confidence 334588999999999999999999999999999999999864321 122222 245678999999999999986
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 145 (244)
T 3d3w_A 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN---------- 145 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT----------
T ss_pred CCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC----------
Confidence 4799999998532 23456778999999999999999988753 3 579999999866543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+++|++..
T Consensus 146 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~ 188 (244)
T 3d3w_A 146 ------------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188 (244)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence 256999999999999999887 5899999999999998743
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-30 Score=210.31 Aligned_cols=174 Identities=17% Similarity=0.166 Sum_probs=136.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ...+.++++|++|.++++++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD-AAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999875432 222222221 2345899999999999988876
Q ss_pred --CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C--ccEEEEecccceeccCCCCCCCcc
Q 026852 79 --GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S--IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 --~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+.+ + .++||++||..+..+.+.
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------ 182 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN------ 182 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC------
Confidence 579999999853 224567889999999999999999998864 1 479999999977654332
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++..
T Consensus 183 ----------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 225 (281)
T 4dry_A 183 ----------------SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA 225 (281)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----
T ss_pred ----------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh
Confidence 255999999999999998887 5899999999999998754
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-30 Score=209.75 Aligned_cols=171 Identities=19% Similarity=0.171 Sum_probs=136.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++ ..++.++++|++|.++++++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQ-ETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999875332 222333 2578899999999999999886
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C--ccEEEEecccceeccCCCCCCCcccc
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S--IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||... +.+.+.|++.+++|+.+++++++++.+.+ + .++||++||..+..+.+.
T Consensus 102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~-------- 173 (272)
T 4dyv_A 102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY-------- 173 (272)
T ss_dssp CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT--------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC--------
Confidence 7899999998532 24567789999999999999999998864 1 469999999977654332
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+...
T Consensus 174 --------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 217 (272)
T 4dyv_A 174 --------------SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK 217 (272)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh
Confidence 255999999999999998887 58999999999999998653
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=202.35 Aligned_cols=164 Identities=15% Similarity=0.103 Sum_probs=132.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+++.. . . .+.++++|++|.+++.++++
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---------~-~-~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE---------Q-Y-PFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS---------C-C-SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh---------c-C-CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37789999999999999999999999999999999987521 0 1 27889999999999998876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------- 142 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG---------- 142 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------
Confidence 6899999998532 23456789999999999999999997753 4589999999976643222
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||+++||+..
T Consensus 143 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 185 (250)
T 2fwm_X 143 ------------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR 185 (250)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccc
Confidence 255999999999999998887 4999999999999999754
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=208.10 Aligned_cols=173 Identities=19% Similarity=0.164 Sum_probs=140.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCC---ceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~---- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++..... ++.++++|++|.++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE-ETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999875432 22233332233 78999999999999988876
Q ss_pred ---CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC--ccEEEEecccceeccC-CCCCCC
Q 026852 79 ---GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS--IKRVVLTSSIGAMLLN-ETPMTP 143 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~vSS~~~~~~~-~~~~~~ 143 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+. +.
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---- 158 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD---- 158 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS----
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCc----
Confidence 6899999998532 234567889999999999999999988641 2899999998765432 11
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+..
T Consensus 159 ------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 201 (280)
T 1xkq_A 159 ------------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTN 201 (280)
T ss_dssp ------------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHH
T ss_pred ------------------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccc
Confidence 245999999999999998876 5999999999999999743
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-30 Score=206.22 Aligned_cols=170 Identities=19% Similarity=0.226 Sum_probs=139.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++ ++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK-AVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 479999999999999999999999999999999875332 2223333224578899999999999998886 78
Q ss_pred CEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccccccCC
Q 026852 81 DGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 81 d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 148 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------ 148 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC------------
Confidence 9999999853 234567788999999999999999998864 3 579999999877654322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 149 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 190 (256)
T 1geg_A 149 ----------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW 190 (256)
T ss_dssp ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred ----------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchh
Confidence 255999999999999998887 589999999999999864
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=202.66 Aligned_cols=172 Identities=19% Similarity=0.090 Sum_probs=138.5
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|...+++|++|||||+||||++++++|+++|++|++++|++++.. +..++. .+++++++|++|.++++++++
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-SLAKEC----PGIEPVCVDLGDWDATEKALGGIG 75 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHS----TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhc----cCCCcEEecCCCHHHHHHHHHHcC
Confidence 445688999999999999999999999999999999999864321 111111 246778999999999999987
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.. .+.+.+.+++.+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 145 (244)
T 1cyd_A 76 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN---------- 145 (244)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT----------
T ss_pred CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC----------
Confidence 479999999853 224456778899999999999999988763 3 579999999866543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +++++++++||+++||+.
T Consensus 146 ------------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~ 187 (244)
T 1cyd_A 146 ------------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMG 187 (244)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHH
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccc
Confidence 255999999999999998887 589999999999999864
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=208.18 Aligned_cols=174 Identities=15% Similarity=0.033 Sum_probs=142.1
Q ss_pred CCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+| |||+++++.|+++|++|++++|+.+.. +.++++.....++.++++|++|.++++++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK--KRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999997 999999999999999999999996432 2222222222346899999999999998876
Q ss_pred ---CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+.++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~------ 178 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH------ 178 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT------
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC------
Confidence 6799999998542 355678899999999999999999999753 479999999977654332
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|++||++.+.+++.++.+ +||++++|+||+|+|++...
T Consensus 179 ----------------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 222 (296)
T 3k31_A 179 ----------------YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG 222 (296)
T ss_dssp ----------------TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS
T ss_pred ----------------chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc
Confidence 245999999999999998887 48999999999999998653
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-30 Score=208.83 Aligned_cols=172 Identities=22% Similarity=0.216 Sum_probs=141.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR-TTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999999875332 2233333234578899999999999988876
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhh--C---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKV--H---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|+||||||.. .+.+.+.+++.+++|+.++.++++++.+. + +.++||++||..+..+.+.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------- 169 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--------- 169 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT---------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC---------
Confidence 689999999853 23455678899999999999999998886 3 4589999999977654322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 170 -------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 211 (277)
T 2rhc_B 170 -------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 211 (277)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH
T ss_pred -------------CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh
Confidence 245999999999999998887 489999999999999864
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=200.65 Aligned_cols=168 Identities=18% Similarity=0.181 Sum_probs=136.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ .+.++++|++|.++++++++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR-EAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG 76 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999864321 111211 27889999999999988876
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||.. .++.+.
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~----------- 144 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLG----------- 144 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCC-----------
Confidence 489999999953 234566788999999999999999998864 457999999996 554322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||++.|++...
T Consensus 145 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 188 (245)
T 1uls_A 145 -----------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK 188 (245)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence 245999999999888888876 48999999999999998653
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=203.58 Aligned_cols=171 Identities=20% Similarity=0.210 Sum_probs=139.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
+|++|||||+||||++++++|+++|++|++++|++++.. +..+++ .....++.++++|++|.+++.++++ +
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLE-ETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 479999999999999999999999999999999875332 222223 2224578999999999999998886 7
Q ss_pred CCEEEEcccccc--------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 80 CDGVFHTASPVI--------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 80 ~d~vi~~Ag~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
+|+||||||... +.+.++++..+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------- 151 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG--------- 151 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC---------
Confidence 899999998532 23456788999999999999999887753 4589999999876644322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. |+++++++||+++||+..
T Consensus 152 -------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (250)
T 2cfc_A 152 -------------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194 (250)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence 2559999999999999988874 999999999999999864
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-29 Score=203.00 Aligned_cols=177 Identities=12% Similarity=0.110 Sum_probs=143.1
Q ss_pred CCCCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCC-CCceEEEEcCCCCcchHHHhh
Q 026852 2 MSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGA-TERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~ 77 (232)
|...+++|++|||||+| |||++++++|+++|++|++++|+.... +.++++ ... ..++.++++|++|.+++++++
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE--KSVHELAGTLDRNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHHTSSSCCCEEEECCCSSSHHHHHHH
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH--HHHHHHHHhcCCCCceEEeCCCCCHHHHHHHH
Confidence 55668999999999995 599999999999999999999986432 222222 111 237899999999999999887
Q ss_pred c-------CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCC
Q 026852 78 D-------GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 78 ~-------~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~ 140 (232)
+ ++|++|||||... +.+.+.++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~- 157 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN- 157 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC-
Confidence 6 6799999998542 244567788999999999999999999753 469999999977654332
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++...
T Consensus 158 ---------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 201 (266)
T 3oig_A 158 ---------------------YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG 201 (266)
T ss_dssp ---------------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT
T ss_pred ---------------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence 255999999999999998887 48999999999999987654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=205.87 Aligned_cols=174 Identities=14% Similarity=0.129 Sum_probs=131.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV------- 77 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------- 77 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++++++
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN-ECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 367899999999999999999999999999999999865332 223333333457899999999999998887
Q ss_pred -cCCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 78 -DGCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 78 -~~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------- 160 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--------- 160 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC---------
Confidence 56899999998532 23456778899999999999999997642 5689999999876644221
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. |+++++++||+++||+..
T Consensus 161 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 203 (266)
T 1xq1_A 161 -------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE 203 (266)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhh
Confidence 2459999999999999988874 999999999999999754
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-30 Score=209.64 Aligned_cols=174 Identities=16% Similarity=0.163 Sum_probs=138.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+..... .+..+++.....++.++++|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999988653221 12334444446789999999999999999886
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~---------- 157 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF---------- 157 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC----------
Confidence 679999999953 235567889999999999999999999975 4579999999877654332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+. ||++++|+||+|.|++.
T Consensus 158 ------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 199 (262)
T 3ksu_A 158 ------------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF 199 (262)
T ss_dssp ------------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence 1349999999999999888884 89999999999999864
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=205.65 Aligned_cols=174 Identities=20% Similarity=0.153 Sum_probs=139.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-CCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++| +++.. .+..+++.....++.++++|++|.+++.++++
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA-NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999 54322 12223333334578899999999999988876
Q ss_pred ---CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------- 154 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL------- 154 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT-------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC-------
Confidence 7899999998532 24456788999999999999999988763 3 579999999866543221
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. |+++++++||+++||+.
T Consensus 155 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 196 (261)
T 1gee_A 155 ---------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN 196 (261)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh
Confidence 2559999999999998888774 99999999999999874
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=204.38 Aligned_cols=178 Identities=19% Similarity=0.151 Sum_probs=144.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG---- 79 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---- 79 (232)
.++++|++|||||+||||++++++|+++|++|++++++......+..+++.....++.++++|++|.++++++++.
T Consensus 3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999998755443222233444444456789999999999998887652
Q ss_pred ---------CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCc
Q 026852 80 ---------CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 80 ---------~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
+|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~----- 157 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD----- 157 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT-----
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC-----
Confidence 89999999853 224566788999999999999999999875 3469999999977654332
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||++.+.+.+.++.+ +||++++++||++.|++....
T Consensus 158 -----------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 202 (255)
T 3icc_A 158 -----------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL 202 (255)
T ss_dssp -----------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT
T ss_pred -----------------cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh
Confidence 255999999999999999887 489999999999999987654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=210.98 Aligned_cols=211 Identities=18% Similarity=0.145 Sum_probs=158.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-----CCCceEEEEcCCCCcchHHHhhcC--CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVDG--CD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--~d 81 (232)
|+||||||+||||++++++|+++|++|++++|+++......++.+.. ...++.++++|++|.+++.+++++ +|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999875422122222211 134688999999999999999885 69
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCc---cEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSI---KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
+|||+||.... .+.++++..+++|+.++.++++++.+. +. ++||++||...+ +... ..+.+|+....|
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~-~~~~----~~~~~E~~~~~~-- 176 (375)
T 1t2a_A 105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELY-GKVQ----EIPQKETTPFYP-- 176 (375)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGT-CSCS----SSSBCTTSCCCC--
T ss_pred EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhh-CCCC----CCCCCccCCCCC--
Confidence 99999986432 123456788999999999999999887 44 799999998554 3222 233445443322
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
...|+.+|.++|.+++.++.+++++++++||+.++||...... .....++.+...+. .++++.+.|+|+|
T Consensus 177 ----~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 252 (375)
T 1t2a_A 177 ----RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH 252 (375)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred ----CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence 2569999999999999999888999999999999999754322 12234455555554 4678899999987
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=209.33 Aligned_cols=174 Identities=15% Similarity=0.068 Sum_probs=138.8
Q ss_pred CCCCcEEEEECCCCh--hHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASGF--VASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~--iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+|+ ||+++++.|+++|++|++++|+++.. +.++++.....++.++++|++|.++++++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK--KRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH--HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 478999999999955 99999999999999999999985321 2223222223468899999999999998876
Q ss_pred ---CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------ 179 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN------ 179 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT------
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc------
Confidence 6899999999542 355678899999999999999999999753 479999999977654332
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|+|++...
T Consensus 180 ----------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 223 (293)
T 3grk_A 180 ----------------YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASG 223 (293)
T ss_dssp ----------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhc
Confidence 245999999999999999887 48999999999999997654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=205.80 Aligned_cols=177 Identities=19% Similarity=0.217 Sum_probs=141.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.++.+|++|||||+||||++++++|+++|++|++.++.......+..+++.....++.++++|++|.+++.++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999997766543322223344444445689999999999999998876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhh----CCccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||... ..+.++++..+++|+.++.++++++.+. .+.++||++||..+..+.+.
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 173 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG-------- 173 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT--------
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC--------
Confidence 7899999998542 3456788999999999999999987642 25689999999877765433
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+. ||++++|+||+|+|++...
T Consensus 174 --------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 217 (267)
T 4iiu_A 174 --------------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM 217 (267)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC
T ss_pred --------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc
Confidence 2559999999999998888874 8999999999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=209.09 Aligned_cols=211 Identities=20% Similarity=0.186 Sum_probs=155.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC----CCCceEEEEcCCCCcchHHHhhcC--CCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG----ATERLHLFKANLLEEGSFDSAVDG--CDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 82 (232)
|+||||||+||||++++++|+++|++|++++|+++....+.++.+.. ...+++++++|++|.+++.+++++ +|+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCE
Confidence 68999999999999999999999999999999875421112222211 135688999999999999999885 799
Q ss_pred EEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCc---cEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 83 VFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSI---KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 83 vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
|||+||.... .+.++++..+++|+.++.++++++.+. +. ++||++||... ++... ..+.+|+....|
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v-~g~~~----~~~~~E~~~~~~--- 152 (372)
T 1db3_A 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSEL-YGLVQ----EIPQKETTPFYP--- 152 (372)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGG-GTTCC----SSSBCTTSCCCC---
T ss_pred EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhh-hCCCC----CCCCCccCCCCC---
Confidence 9999996432 345677889999999999999999887 45 79999999854 44322 223444443322
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++.+++++++++||+.++||...... .....++.+...+. .++++.+.|+|+|
T Consensus 153 ---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 228 (372)
T 1db3_A 153 ---RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH 228 (372)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred ---CChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence 3569999999999999999889999999999999999864322 12344455556664 4688899999987
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=201.08 Aligned_cols=169 Identities=15% Similarity=0.131 Sum_probs=137.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc-chHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~----- 78 (232)
+++|+++||||+||||++++++|+++|++ |++++|++.....+.+.+.. ...++.++++|++|. +++.++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 67899999999999999999999999997 99999987421112222211 135789999999998 88877765
Q ss_pred --CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC------ccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS------IKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||.. +.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 82 ~g~id~lv~~Ag~~---~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 147 (254)
T 1sby_A 82 LKTVDILINGAGIL---DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ----------- 147 (254)
T ss_dssp HSCCCEEEECCCCC---CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----------
T ss_pred cCCCCEEEECCccC---CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC-----------
Confidence 789999999964 4577899999999999999999988642 368999999977643222
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +|+++++|+||+|+||+.
T Consensus 148 -----------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~ 189 (254)
T 1sby_A 148 -----------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV 189 (254)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccc
Confidence 245999999999999998876 699999999999999864
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=202.71 Aligned_cols=171 Identities=19% Similarity=0.193 Sum_probs=139.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++ ..++.++++|++|.++++++++
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 367899999999999999999999999999999999986543 233333 3468999999999999999887
Q ss_pred -CCCEEEEccccccc-----------CCCCchhhhhHHHHHHHHHHHHHHHhhC---------CccEEEEecccceeccC
Q 026852 79 -GCDGVFHTASPVIF-----------LSDNPQADIVDPAVMGTLNVLRSCAKVH---------SIKRVVLTSSIGAMLLN 137 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~vSS~~~~~~~ 137 (232)
++|+||||||.... .+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 164 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 164 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence 78999999985421 3445678999999999999999998863 35789999999776543
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+. ...|+.||.+.+.+++.++.+ +||++++|+||++.||+..
T Consensus 165 ~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 209 (265)
T 2o23_A 165 VG----------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT 209 (265)
T ss_dssp TT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred CC----------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccc
Confidence 22 245999999999999888877 4899999999999998754
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=205.93 Aligned_cols=169 Identities=19% Similarity=0.153 Sum_probs=138.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++. .++.++++|++|.++++++++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ-AVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDALG 85 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999874322 2222221 267889999999999998887
Q ss_pred CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.. .+.+.+.++..+++|+.++.++++++.+.+ + .++||++||..+..+.+.
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 155 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL---------- 155 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT----------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC----------
Confidence 789999999853 234556789999999999999999998863 3 589999999876543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 156 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 197 (263)
T 3ak4_A 156 ------------LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQ 197 (263)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHH
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhh
Confidence 245999999999999998887 499999999999999874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=201.11 Aligned_cols=168 Identities=18% Similarity=0.150 Sum_probs=137.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh---cCCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---DGCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d~ 82 (232)
+++|++|||||+||||++++++|+++|++|++++|++++. +++. ...++.++++|++|.+++++++ .++|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-----QELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----GGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCE
Confidence 6789999999999999999999999999999999986432 2222 1236889999999999988764 47899
Q ss_pred EEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCC
Q 026852 83 VFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSN 154 (232)
Q Consensus 83 vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~ 154 (232)
+|||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 142 (246)
T 2ag5_A 78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV--------------- 142 (246)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT---------------
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC---------------
Confidence 999998532 24556788999999999999999998753 4589999999866543220
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
....|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 143 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 185 (246)
T 2ag5_A 143 ------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSL 185 (246)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHH
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcch
Confidence 1255999999999999999887 499999999999999864
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=207.34 Aligned_cols=171 Identities=22% Similarity=0.223 Sum_probs=134.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-CCCCcchhhhhhhcCC-CCceEEEEcCCCCc----chHHHhhc
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGA-TERLHLFKANLLEE----GSFDSAVD 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~ 78 (232)
.|++|++|||||+||||++++++|+++|++|++++| ++++.. +..+++... ..++.++++|++|. +++.++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ-RLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH-HHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 367899999999999999999999999999999999 654322 222233221 35789999999999 88888776
Q ss_pred -------CCCEEEEcccccc-----cCCC-----------CchhhhhHHHHHHHHHHHHHHHhhC--Cc------cEEEE
Q 026852 79 -------GCDGVFHTASPVI-----FLSD-----------NPQADIVDPAVMGTLNVLRSCAKVH--SI------KRVVL 127 (232)
Q Consensus 79 -------~~d~vi~~Ag~~~-----~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~~iv~ 127 (232)
++|+||||||... +.+. +.++..+++|+.++.++++++.+.+ +. ++||+
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~ 166 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN 166 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence 6899999999532 2334 6778899999999999999999975 23 79999
Q ss_pred ecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCC
Q 026852 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGP 198 (232)
Q Consensus 128 vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~ 198 (232)
+||..+..+.+. ...|+.||.+.+.+++.++.+. ||++++|+||+|+||
T Consensus 167 isS~~~~~~~~~----------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 167 LCDAMTDLPLPG----------------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp ECCGGGGSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred ECchhhcCCCCC----------------------CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 999977654322 2459999999999999988874 999999999999999
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=205.53 Aligned_cols=168 Identities=17% Similarity=0.119 Sum_probs=134.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||+++++.|+++|++|++++|++++.. +.+... ++.++++|++|.+++.++++
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV-TELRQA-----GAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH-HHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 478899999999999999999999999999999999986432 222221 37899999999999988876
Q ss_pred -CCCEEEEccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.... .+.+.+++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 166 (260)
T 3gem_A 98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK----------- 166 (260)
T ss_dssp SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS-----------
T ss_pred CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC-----------
Confidence 68999999996422 2345677899999999999999998863 4479999999977654332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.++ +|++++|+||++.|+..
T Consensus 167 -----------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~ 207 (260)
T 3gem_A 167 -----------HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPK 207 (260)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---
T ss_pred -----------cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCC
Confidence 2559999999999999998885 59999999999999864
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=204.58 Aligned_cols=177 Identities=23% Similarity=0.181 Sum_probs=142.3
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
|+.++++|++|||||+||||++++++|+++|++|++++|++++.. ...+++.. ...++.++++|++|.+++.++++
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAK-AVAEEIANKYGVKAHGVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 566788999999999999999999999999999999999864322 12222211 13468899999999999998886
Q ss_pred -----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+||||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+.++.+.
T Consensus 80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------ 153 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG------ 153 (248)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT------
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC------
Confidence 7899999998542 23456778999999999999998887653 4579999999876654322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ .++++++++||+++||+..
T Consensus 154 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~ 196 (248)
T 2pnf_A 154 ----------------QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA 196 (248)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh
Confidence 245999999999999888876 4899999999999999754
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=209.84 Aligned_cols=184 Identities=21% Similarity=0.222 Sum_probs=140.6
Q ss_pred cEEEEECCCChhHHHHHHHHH-HCCCeEEEEEcCCCCcc-------hhhh----hhhcCC--CCc---eEEEEcCCCCcc
Q 026852 9 KVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPNSPK-------TEHL----RELDGA--TER---LHLFKANLLEEG 71 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~-~~g~~V~~~~r~~~~~~-------~~~~----~~~~~~--~~~---~~~~~~D~~~~~ 71 (232)
|+||||||+||||++++++|+ ++|++|++++|+..... .+.+ +.+... ..+ ++++++|++|.+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 589999999999999999999 99999999999865420 1111 122111 124 889999999999
Q ss_pred hHHHhhc--C-CCEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCC---CCCc
Q 026852 72 SFDSAVD--G-CDGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP---MTPD 144 (232)
Q Consensus 72 ~~~~~~~--~-~d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~---~~~~ 144 (232)
++.++++ + +|+|||+||.... .+.++++..+++|+.++.++++++.+. +.++||++||.. .++.... ..+.
T Consensus 83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~-v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAA-IFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG-GTBSCCC-----CC
T ss_pred HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHH-HhCCCCcccccccc
Confidence 9999987 6 9999999986432 123456789999999999999999886 778999999974 4443220 0002
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
.+.+|+.... ....|+.||.++|.+++.++.+++++++++||++|+||..
T Consensus 161 ~~~~E~~~~~------p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~ 210 (397)
T 1gy8_A 161 EPIDINAKKS------PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE 210 (397)
T ss_dssp CCBCTTSCCB------CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred cCcCccCCCC------CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence 3344444322 2356999999999999999988899999999999999974
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=203.56 Aligned_cols=162 Identities=17% Similarity=0.170 Sum_probs=137.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++ ..++.++++|++|.++++++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3788999999999999999999999999999999998753 2357889999999999998876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 142 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN---------- 142 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC----------
Confidence 6899999999532 23556789999999999999999998864 3579999999976543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhcC--CcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG--IDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~--i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+.+ |++++|+||++.|++.
T Consensus 143 ------------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~ 183 (264)
T 2dtx_A 143 ------------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLV 183 (264)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHH
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcch
Confidence 25599999999999999988754 9999999999999864
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=201.62 Aligned_cols=173 Identities=19% Similarity=0.184 Sum_probs=133.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d 81 (232)
..++|++|||||+||||+++++.|+++|++|++++|+.++.. +..+++ ..++.++.+|+++.+++.++++ ++|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLK-SLGNAL---KDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 468899999999999999999999999999999999875332 222223 2478899999999999999887 679
Q ss_pred EEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 82 GVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 82 ~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
++|||||... ..+.++++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 152 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG-------------- 152 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC--------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC--------------
Confidence 9999999532 34567889999999999999999987753 4579999999977654332
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||++.+.+++.++.+ +|+++++++||+|.|++....
T Consensus 153 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 197 (249)
T 3f9i_A 153 --------QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL 197 (249)
T ss_dssp --------SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence 255999999999999998887 589999999999999986544
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=201.09 Aligned_cols=172 Identities=17% Similarity=0.162 Sum_probs=129.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++|++|||||+||||++++++|+++|++|+++ .|+++... +..+++.....++.++++|++|.+++.++++
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLD-ATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHH-HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999999998 45554322 2233333334578999999999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+.++.+.
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 151 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG---------- 151 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC----------
Confidence 7899999998532 24567789999999999999999988753 4579999999877655322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. |+++++++||++.|++.
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 193 (247)
T 2hq1_A 152 ------------QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMT 193 (247)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred ------------CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccch
Confidence 2559999999999999988874 89999999999999864
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=204.02 Aligned_cols=174 Identities=17% Similarity=0.143 Sum_probs=140.7
Q ss_pred CCCCcEEEEECCCC-hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGASG-FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g-~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+| |||++++++|+++|++|++++|+.++.. +..+++... ..++.++++|++|.++++++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLG-ETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 47899999999985 8999999999999999999999875433 233333322 3689999999999999988876
Q ss_pred ---CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ---GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------- 170 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS------- 170 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT-------
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC-------
Confidence 6799999999532 34567789999999999999999998863 4578999999877654322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|+|++..
T Consensus 171 ---------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 213 (266)
T 3o38_A 171 ---------------QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLE 213 (266)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----
T ss_pred ---------------CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhh
Confidence 255999999999999999887 6999999999999999754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=207.23 Aligned_cols=211 Identities=20% Similarity=0.207 Sum_probs=155.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC------cchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc--C
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS------PKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD--G 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~------~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~ 79 (232)
|+||||||+||||++++++|+++|++|++++|+... .. +.++.+.. ...+++++++|++|.+++.++++ +
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLP-ESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSB-HHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccH-HHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 689999999999999999999999999999987543 11 22222211 13468899999999999999998 7
Q ss_pred CCEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 80 CDGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 80 ~d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
+|+|||+||.... ...+++++.+++|+.++.++++++.+. +.++||++||... ++... ..+.+|+....|
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~-~g~~~----~~~~~E~~~~~p--- 152 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATV-YGNPQ----YLPLDEAHPTGG--- 152 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG-GCSCS----SSSBCTTSCCCC---
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHH-hCCCC----CCCcCCCCCCCC---
Confidence 9999999986422 123456789999999999999999886 7789999999854 44322 334455543322
Q ss_pred cccchhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCCC------CC--CcchHHHHHHHHc--CC---CCC---
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQ------PI--LNFGAEVILNLIN--GN---IYS--- 221 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~~------~~--~~~~~~~~~~~~~--~~---~~~--- 221 (232)
....|+.+|.++|.+++.++.+ .+++++++||++++||... .. .......+.+.+. +. +++
T Consensus 153 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (348)
T 1ek6_A 153 --CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY 230 (348)
T ss_dssp --CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred --CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence 1356999999999999998877 2499999999999999531 11 1223334444443 33 343
Q ss_pred ---Cccceeeeec
Q 026852 222 ---AAIQDRIMIY 231 (232)
Q Consensus 222 ---~~~~~~~~~~ 231 (232)
++.+.|+|+|
T Consensus 231 ~~~~g~~~~~~i~ 243 (348)
T 1ek6_A 231 DTEDGTGVRDYIH 243 (348)
T ss_dssp SSSSSSCEECEEE
T ss_pred cCCCCceEEeeEE
Confidence 6889999987
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=210.18 Aligned_cols=174 Identities=20% Similarity=0.218 Sum_probs=141.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc-------h----hhhhhhcCCCCceEEEEcCCCCcchH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-------T----EHLRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~-------~----~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
.+++|++|||||+||||+++++.|+++|++|++++|+..... . +..+.+.....++.++++|++|.+++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 378899999999999999999999999999999998743210 1 12223333456789999999999999
Q ss_pred HHhhc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccC
Q 026852 74 DSAVD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLN 137 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~ 137 (232)
+++++ ++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.+ + .++||++||..+..+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~ 202 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA 202 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence 98876 689999999953 234567889999999999999999998864 2 4789999999776543
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
+. ...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 203 ~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 246 (317)
T 3oec_A 203 PG----------------------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246 (317)
T ss_dssp TT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred CC----------------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccc
Confidence 32 255999999999999999888 499999999999999863
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=205.36 Aligned_cols=169 Identities=19% Similarity=0.216 Sum_probs=138.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. ...+++ .++.++++|++|.++++++++
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR-ALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 378899999999999999999999999999999999874322 122222 247899999999999988876
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 150 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ---------- 150 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC----------
Confidence 6899999998532 23456688999999999999999998753 2479999999877655332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+++||+.
T Consensus 151 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~ 192 (270)
T 1yde_A 151 ------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW 192 (270)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred ------------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchh
Confidence 245999999999999998876 599999999999999863
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-29 Score=201.78 Aligned_cols=175 Identities=18% Similarity=0.257 Sum_probs=141.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.+... ...+++.. ..++.++++|++|.++++++++
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ-KVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHH-HHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999864322 22233322 2378999999999999998886
Q ss_pred -CCCEEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 -GCDGVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 162 (278)
T 2bgk_A 91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------- 162 (278)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--------
T ss_pred CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC--------
Confidence 7899999998542 13346678899999999999999998863 4579999999976543220
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
....|+.||.+.+.+++.++.+ +|+++++++||+++||+...
T Consensus 163 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 207 (278)
T 2bgk_A 163 -------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD 207 (278)
T ss_dssp -------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhh
Confidence 1245999999999999998876 59999999999999998654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=203.35 Aligned_cols=173 Identities=16% Similarity=0.142 Sum_probs=137.7
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
|+.++++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.+++.++++
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV-QCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK 79 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHH
Confidence 566788999999999999999999999999999999999875322 222233221 3468899999999999988876
Q ss_pred ------CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC------ccEEEEecccceeccCCCCCCCccc
Q 026852 79 ------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS------IKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||.. ..+++++.+++|+.++.++++.+.+.+. .++||++||..+..+.+.
T Consensus 80 ~~~~~g~id~lv~~Ag~~---~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 149 (267)
T 2gdz_A 80 VVDHFGRLDILVNNAGVN---NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ------- 149 (267)
T ss_dssp HHHHHSCCCEEEECCCCC---CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------
T ss_pred HHHHcCCCCEEEECCCCC---ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC-------
Confidence 479999999964 3567899999999999999888877542 479999999976643221
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHH--H---hcCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA--K---ENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~--~---~~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++ . .+|+++++|+||++.||+.
T Consensus 150 ---------------~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~ 193 (267)
T 2gdz_A 150 ---------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL 193 (267)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH
T ss_pred ---------------CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhh
Confidence 2459999999999988753 3 3699999999999999864
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-30 Score=205.98 Aligned_cols=170 Identities=18% Similarity=0.165 Sum_probs=138.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ-QLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578899999999999999999999999999999999864322 222233 3468899999999999888876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC--ccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS--IKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 147 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ----------- 147 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCC-----------
Confidence 4699999999532 234567889999999999999999887631 289999999977644321
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---c--CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---N--GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~--~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ + ||++++|+||+++||+.
T Consensus 148 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~ 191 (253)
T 1hxh_A 148 -----------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM 191 (253)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh
Confidence 245999999999999988877 3 89999999999999863
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=201.09 Aligned_cols=172 Identities=11% Similarity=0.118 Sum_probs=140.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
+|++|||||+||||++++++|+++|+ +|++++|++++.. ...+++.....++.++++|++|.+++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE-KISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH-HHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHH-HHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 58999999999999999999999999 9999999864322 2223333335678999999999999988876
Q ss_pred -----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|+||||||... ..+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------ 154 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH------ 154 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------
T ss_pred HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC------
Confidence 6899999998532 24556788999999999999999998753 4589999999976643221
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+++||+...
T Consensus 155 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 198 (244)
T 2bd0_A 155 ----------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK 198 (244)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh
Confidence 255999999999999888775 58999999999999998653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=198.22 Aligned_cols=193 Identities=18% Similarity=0.148 Sum_probs=143.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
|++|++|||||+||||++++++|+++| ++|++++|++++.. .+.++ ...++.++++|++|.+++.++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~--~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT--ELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH--HHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH--HHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999 99999999876432 23222 24678999999999999998887
Q ss_pred ----CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---------C-----ccEEEEeccccee
Q 026852 79 ----GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---------S-----IKRVVLTSSIGAM 134 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~iv~vSS~~~~ 134 (232)
++|+||||||... ..+.+.++..+++|+.++.++++++.+.+ + .++||++||..+.
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 7999999998643 13345678899999999999999988763 3 5799999999776
Q ss_pred ccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCCC----Ccch
Q 026852 135 LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI----LNFG 207 (232)
Q Consensus 135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~~----~~~~ 207 (232)
.+.... ... ......|+.||++.+.+++.++.++ |+++++++||+|.|++.... .+..
T Consensus 157 ~~~~~~---------~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~ 221 (250)
T 1yo6_A 157 ITDNTS---------GSA------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQS 221 (250)
T ss_dssp STTCCS---------TTS------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHH
T ss_pred cCCccc---------ccc------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCCCCCCHHHH
Confidence 543210 000 0113559999999999999998885 89999999999999986532 2344
Q ss_pred HHHHHHHHcC
Q 026852 208 AEVILNLING 217 (232)
Q Consensus 208 ~~~~~~~~~~ 217 (232)
+..+...+..
T Consensus 222 a~~~~~~~~~ 231 (250)
T 1yo6_A 222 TAELISSFNK 231 (250)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 5556665544
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-28 Score=202.26 Aligned_cols=213 Identities=22% Similarity=0.298 Sum_probs=156.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+++|+||||||+|+||++++++|+++|++|++++|+..... ..+..+. ...++.++++|+.+.. +.++|+|
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~v 95 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK-RNVEHWI-GHENFELINHDVVEPL-----YIEVDQI 95 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGTGGGT-TCTTEEEEECCTTSCC-----CCCCSEE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccch-hhhhhhc-cCCceEEEeCccCChh-----hcCCCEE
Confidence 3467789999999999999999999999999999999865332 1222221 1356899999998763 5689999
Q ss_pred EEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+||.... ....+++..+++|+.++.++++++.+. +. ++|++||.. .++... ..+.+|+.+.... +....
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~-v~g~~~----~~~~~E~~~~~~~-~~~~~ 167 (343)
T 2b69_A 96 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSE-VYGDPE----VHPQSEDYWGHVN-PIGPR 167 (343)
T ss_dssp EECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGG-GGBSCS----SSSBCTTCCCBCC-SSSTT
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHH-HhCCCC----CCCCcccccccCC-CCCCC
Confidence 999986432 124566788999999999999999887 54 999999984 444322 2233443221100 11223
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC-CcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-LNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
..|+.+|.++|.+++.++++++++++++|||+++||..... ......++.+.+.++ +++++.+.++|+|
T Consensus 168 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 240 (343)
T 2b69_A 168 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY 240 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEe
Confidence 56999999999999999888899999999999999986543 234456666677776 5788999999987
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=204.13 Aligned_cols=173 Identities=20% Similarity=0.159 Sum_probs=137.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.....++.++++|++|.+++.++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLR-VVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999999865332 2223332224578899999999999887754
Q ss_pred --CCCEEEEccc--cc----------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCC
Q 026852 79 --GCDGVFHTAS--PV----------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 79 --~~d~vi~~Ag--~~----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++|++||||| .. .+.+.+.++..+++|+.+++++++++.+.+ +.++||++||..+..+.+
T Consensus 81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 157 (260)
T 2qq5_A 81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF--- 157 (260)
T ss_dssp TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS---
T ss_pred CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC---
Confidence 4699999994 21 234567788999999999999999887653 458999999986653211
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+..
T Consensus 158 --------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 200 (260)
T 2qq5_A 158 --------------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLK 200 (260)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-
T ss_pred --------------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHH
Confidence 145999999999999998876 5999999999999999854
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=210.49 Aligned_cols=174 Identities=20% Similarity=0.147 Sum_probs=141.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC---------CCcchhhhhhhcCCCCceEEEEcCCCCcchHHH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---------NSPKTEHLRELDGATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (232)
.+++|++|||||+||||+++++.|+++|++|++++|+. .....+..+++.....++.++++|++|.+++.+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 37889999999999999999999999999999999872 111113334444445678999999999999988
Q ss_pred hhc-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC---------ccEEEEeccccee
Q 026852 76 AVD-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS---------IKRVVLTSSIGAM 134 (232)
Q Consensus 76 ~~~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~vSS~~~~ 134 (232)
+++ ++|++|||||.. .+.+.+.+++.+++|+.+++++++++.+.+. .++||++||..+.
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 183 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence 876 789999999953 2356678899999999999999999877632 1699999999777
Q ss_pred ccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 135 LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.+... ...|+.||++.+.+++.++.+ +||++++|+|| +.|++..
T Consensus 184 ~~~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~ 230 (322)
T 3qlj_A 184 QGSVG----------------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTE 230 (322)
T ss_dssp HCBTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSC
T ss_pred cCCCC----------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccch
Confidence 65432 255999999999999999888 69999999999 8888754
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=203.31 Aligned_cols=174 Identities=14% Similarity=0.122 Sum_probs=140.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+++... +..+++.....++.++++|++|++++.++++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 368899999999999999999999999999999999875322 2233333334578899999999999998886
Q ss_pred -CCCEEEEcccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... +.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 155 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------- 155 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC-----------
Confidence 7999999998543 23456678999999999999999987642 4689999999866543221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. |+++++++||.++||+..
T Consensus 156 -----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~ 198 (255)
T 1fmc_A 156 -----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198 (255)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred -----------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhh
Confidence 2559999999999999988774 899999999999998653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=204.55 Aligned_cols=199 Identities=20% Similarity=0.291 Sum_probs=152.8
Q ss_pred EEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
+||||||+||||++++++|+++ |++|++++|+..... ++.++++|++|.+++.++++ ++|+|||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence 4899999999999999999999 899999999864321 35688999999999999998 8999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
+||........+++..+++|+.++.++++++.+. +.+++|++||...+.+... ..+.+|+.... ....|
T Consensus 69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~----~~~~~e~~~~~------p~~~Y 137 (317)
T 3ajr_A 69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETP----KNKVPSITITR------PRTMF 137 (317)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSC----SSSBCSSSCCC------CCSHH
T ss_pred CCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCC----CCCccccccCC------CCchH
Confidence 9986533223456788999999999999999887 7789999999965432211 12233333222 23569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+.||.++|.+++.++++++++++++||+.++++...+.. ......+.+.+.+. .++++.+.++|+|
T Consensus 138 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (317)
T 3ajr_A 138 GVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMY 209 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeE
Confidence 999999999999988888999999999999998653321 22344445555444 5677888999987
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=203.29 Aligned_cols=173 Identities=21% Similarity=0.191 Sum_probs=135.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE-RVAGEI---GDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4578899999999999999999999999999999999875432 222222 3578999999999999988876
Q ss_pred --CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-------ccEEEEecccceeccCCCCCCC
Q 026852 79 --GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-------IKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 --~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-------~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||... ..+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---- 156 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN---- 156 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT----
T ss_pred cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC----
Confidence 6799999999542 135567889999999999999999988642 357999999876644322
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++++||.+.||+...
T Consensus 157 ------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 200 (261)
T 3n74_A 157 ------------------LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT 200 (261)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------
T ss_pred ------------------ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhh
Confidence 255999999999999999888 58999999999999997653
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=206.20 Aligned_cols=198 Identities=22% Similarity=0.188 Sum_probs=152.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 82 (232)
++++|+||||||+|+||++++++|+++|+ +.... ...++++++|++|.+++.+++++ +|+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------WVFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence 46778999999999999999999999998 11100 12344567999999999999987 999
Q ss_pred EEEccccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCC----CCChh
Q 026852 83 VFHTASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW----FSNPV 156 (232)
Q Consensus 83 vi~~Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~----~~~~~ 156 (232)
|||+|+.... ...+++...+++|+.++.++++++.+. +.++||++||.. .|+... ..+.+|+. .+.|.
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~-vyg~~~----~~~~~E~~~~~~~~~p~ 138 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTC-IFPDKT----TYPIDETMIHNGPPHNS 138 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGG-GSCSSC----CSSBCGGGGGBSCCCSS
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchh-hcCCCC----CCCccccccccCCCCCC
Confidence 9999997431 345677889999999999999999887 788999999994 444432 23344443 11111
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHH----HHcCC---CCCCccce
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILN----LINGN---IYSAAIQD 226 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~----~~~~~---~~~~~~~~ 226 (232)
..+|+.+|.++|.+++.++++++++++++||++++||...... ...+.++.+ ...+. +++++.+.
T Consensus 139 -----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 213 (319)
T 4b8w_A 139 -----NFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR 213 (319)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred -----cchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence 1359999999999999999989999999999999999875421 234445555 56666 67899999
Q ss_pred eeeec
Q 026852 227 RIMIY 231 (232)
Q Consensus 227 ~~~~~ 231 (232)
|+|+|
T Consensus 214 ~~~i~ 218 (319)
T 4b8w_A 214 RQFIY 218 (319)
T ss_dssp ECEEE
T ss_pred EEEEe
Confidence 99987
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=202.16 Aligned_cols=166 Identities=17% Similarity=0.091 Sum_probs=134.7
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|+.+.++|++|||||+||||++++++|+++|++|++++|+++... ....++++|++|.+++.++++
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~ 69 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVG 69 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHH
Confidence 555678899999999999999999999999999999999876422 135678999999999888875
Q ss_pred ------CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ------GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 70 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 143 (241)
T 1dhr_A 70 KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG------ 143 (241)
T ss_dssp HHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------
T ss_pred HHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC------
Confidence 6899999999542 233456788999999999999999998752 379999999977654322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-----CCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-----~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||++.|++.
T Consensus 144 ----------------~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~ 187 (241)
T 1dhr_A 144 ----------------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN 187 (241)
T ss_dssp ----------------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc
Confidence 2559999999999999998863 59999999999999864
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=208.16 Aligned_cols=204 Identities=19% Similarity=0.253 Sum_probs=155.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----C
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----G 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~ 79 (232)
+++|+||||||+||||++++++|+++| ++|++++|++.... ...+. ++. +++|++|.+.+..+++ +
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---FVNLV----DLN-IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG---GGGTT----TSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch---hhccc----Cce-EeeecCcHHHHHHHHhhcccCC
Confidence 456899999999999999999999999 99999999875321 11121 122 6789999999999987 5
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
+|+|||+||.... ...++++.+++|+.++.++++++.+. +. +||++||... ++... ..+.+|+....|
T Consensus 116 ~d~Vih~A~~~~~-~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v-~g~~~----~~~~~E~~~~~p---- 183 (357)
T 2x6t_A 116 VEAIFHEGACSST-TEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAAT-YGGRT----SDFIESREYEKP---- 183 (357)
T ss_dssp CCEEEECCSCCCT-TCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGG-GCSCS----SCCCSSGGGCCC----
T ss_pred CCEEEECCcccCC-ccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHH-hCCCC----CCCcCCcCCCCC----
Confidence 9999999996543 45677899999999999999999987 66 9999999954 44322 223344432222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC---CcchHHHHHHHHcCC---CCCCccc-eeeeec
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGN---IYSAAIQ-DRIMIY 231 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 231 (232)
...|+.+|.++|.+++.++.+++++++++||++|+||..... ......++.+...+. +++++.+ .++|+|
T Consensus 184 --~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 260 (357)
T 2x6t_A 184 --LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 260 (357)
T ss_dssp --SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEE
T ss_pred --CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEE
Confidence 356999999999999999888899999999999999986532 123455666666666 5778888 999987
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=204.40 Aligned_cols=171 Identities=16% Similarity=0.209 Sum_probs=135.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------ 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 79 (232)
|+ |++|||||+||||++++++|+++|++|++++|++++.. +..+++... .++.++++|++|.+++.+++++
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ-ALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 55 89999999999999999999999999999999875332 223333322 5789999999999999998875
Q ss_pred -CCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---Ccc-EEEEecccceeccCCCCCCCccccc
Q 026852 80 -CDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIK-RVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 80 -~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~-~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
+|++|||||... +.+.+.++..+++|+.++.++++++.+.+ +.+ +||++||..+..+.+.
T Consensus 97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~--------- 167 (272)
T 2nwq_A 97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG--------- 167 (272)
T ss_dssp SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT---------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC---------
Confidence 499999998532 24456788999999999999999988754 446 9999999977644322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.||+..
T Consensus 168 -------------~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~ 210 (272)
T 2nwq_A 168 -------------SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSL 210 (272)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchh
Confidence 245999999999999999877 4899999999999999753
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-29 Score=196.34 Aligned_cols=167 Identities=26% Similarity=0.308 Sum_probs=134.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|++++... + ..++.++++|++|.+++.++++++|+|||+||
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-----E---NEHLKVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-----C---CTTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-----c---cCceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 789999999999999999999999999999999754321 1 25789999999999999999999999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
+... . .+.+++|+.++.++++++.+. +.++||++||.+.+++.+.. . .++... ....+|+.+
T Consensus 77 ~~~~----~-~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~----~--~~~~~~------~p~~~Y~~s 138 (227)
T 3dhn_A 77 PGWN----N-PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGL----R--LMDSGE------VPENILPGV 138 (227)
T ss_dssp C-----------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTE----E--GGGTTC------SCGGGHHHH
T ss_pred CCCC----C-hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCC----c--cccCCc------chHHHHHHH
Confidence 6421 1 237889999999999999887 78899999999766554321 1 111111 123569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
|...|.+++.++++.+++++++|||+++||...
T Consensus 139 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~ 171 (227)
T 3dhn_A 139 KALGEFYLNFLMKEKEIDWVFFSPAADMRPGVR 171 (227)
T ss_dssp HHHHHHHHHTGGGCCSSEEEEEECCSEEESCCC
T ss_pred HHHHHHHHHHHhhccCccEEEEeCCcccCCCcc
Confidence 999999998888788999999999999999754
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=201.32 Aligned_cols=166 Identities=17% Similarity=0.207 Sum_probs=133.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++ ++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 57999999999999999999999999999999874322 222233 2468899999999999999876 579
Q ss_pred EEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|||||.. .+.+.++++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 143 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG------------- 143 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-------------
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC-------------
Confidence 999999853 224556789999999999999999998753 4589999999976644322
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCcee-CCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI-GPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~-g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|. ||+.
T Consensus 144 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~ 186 (248)
T 3asu_A 144 ---------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFS 186 (248)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcch
Confidence 255999999999999999887 48999999999999 8874
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=200.91 Aligned_cols=163 Identities=20% Similarity=0.272 Sum_probs=132.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. .+.++++|++|+++++++++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDITDTEQVEQAYKEIEETH 85 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999875421 26789999999999988876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.+++++.+++|+.++.++++++.+.+ +.++||++||..+..+.+
T Consensus 86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------- 154 (253)
T 2nm0_A 86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA----------- 154 (253)
T ss_dssp CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-----------
Confidence 469999999853 234677899999999999999999988754 457999999986653311
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.||.+.+.+.+.++.+ +||++++|+||+|.|++..
T Consensus 155 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 198 (253)
T 2nm0_A 155 -----------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK 198 (253)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----
T ss_pred -----------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh
Confidence 1245999999999999998887 4899999999999999754
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=206.83 Aligned_cols=203 Identities=21% Similarity=0.209 Sum_probs=150.4
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
..+++|+||||||+|+||++++++|+++|++|++++|++.... ...+..+. ...+++++++|++ ++|
T Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~d 71 (321)
T 3vps_A 3 RNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS----------DVR 71 (321)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------TEE
T ss_pred cccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc----------cCC
Confidence 3456789999999999999999999999999999999876211 01111111 1234556666665 789
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||+||.... .....+...++ |+.++.++++++.+. +.++||++||... ++... ..+.+|+....|
T Consensus 72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v-~~~~~----~~~~~E~~~~~p----- 139 (321)
T 3vps_A 72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEV-YGQAD----TLPTPEDSPLSP----- 139 (321)
T ss_dssp EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGG-GCSCS----SSSBCTTSCCCC-----
T ss_pred EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHH-hCCCC----CCCCCCCCCCCC-----
Confidence 99999986432 22345566778 999999999999988 6889999999954 44332 334455543332
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCC-cEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGI-DLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i-~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.+|..+|.+++.++.++++ +++++||++++||..... .....++.....+. +++++.+.++|+|
T Consensus 140 -~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 212 (321)
T 3vps_A 140 -RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTY 212 (321)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEE
T ss_pred -CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEE
Confidence 356999999999999999998999 999999999999987653 34566666677666 6788999999987
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=206.07 Aligned_cols=172 Identities=19% Similarity=0.207 Sum_probs=137.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC-CCcchhhhhhhc-CCCCceEEEEcCCCC----cchHHHhhc
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELD-GATERLHLFKANLLE----EGSFDSAVD 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~~~~ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++ ++.. +..+++. ....++.++++|++| .+++.++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAV-SLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 36789999999999999999999999999999999987 4322 2223332 224578999999999 888888775
Q ss_pred -------CCCEEEEcccccc----------c-----CCCCchhhhhHHHHHHHHHHHHHHHhhCC---------ccEEEE
Q 026852 79 -------GCDGVFHTASPVI----------F-----LSDNPQADIVDPAVMGTLNVLRSCAKVHS---------IKRVVL 127 (232)
Q Consensus 79 -------~~d~vi~~Ag~~~----------~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~ 127 (232)
++|+||||||... + .+.+.++..+++|+.+++++++++.+.+. .++||+
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 178 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN 178 (288)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence 6899999999532 1 22345678999999999999999988752 469999
Q ss_pred ecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 128 vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
+||..+..+.+. ...|+.||.+.+.+++.++.+ +||++++|+||+|+||+
T Consensus 179 isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 179 LCDAMVDQPCMA----------------------FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp ECCTTTTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred EecccccCCCCC----------------------CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 999976543222 245999999999999988887 48999999999999998
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-29 Score=201.06 Aligned_cols=174 Identities=14% Similarity=0.198 Sum_probs=139.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+++... +..+++.. ..++.++++|++|.+++.++++
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE-KAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999864322 22233322 2578999999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc-cEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI-KRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++.+.+.+ +. ++||++||..+..+.+.
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 151 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS-------- 151 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC--------
Confidence 4899999998532 23455678899999999999999887753 33 79999999976644322
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+++||+..
T Consensus 152 --------------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~ 196 (251)
T 1zk4_A 152 --------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196 (251)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH
T ss_pred --------------CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhh
Confidence 255999999999999887763 5899999999999998653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=198.00 Aligned_cols=191 Identities=19% Similarity=0.231 Sum_probs=148.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCC---CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
.+++|++|||||+||||++++++|+++| ++|++++|+.++.. .++++.....++.++++|++|.++++++++
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~--~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK--ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH--HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH--HHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 4678999999999999999999999999 99999999987543 233332224578999999999999999887
Q ss_pred ------CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---------C-----ccEEEEecccc
Q 026852 79 ------GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---------S-----IKRVVLTSSIG 132 (232)
Q Consensus 79 ------~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~iv~vSS~~ 132 (232)
++|+||||||... ..+.+.++..+++|+.++.++++++.+.+ + .++||++||..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 7999999999543 23456778899999999999999998763 1 47899999997
Q ss_pred eeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC----c
Q 026852 133 AMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL----N 205 (232)
Q Consensus 133 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~----~ 205 (232)
+..+... . .....|+.||.+.+.+++.++.+ +|+++++|+||+|.|++..... +
T Consensus 176 ~~~~~~~--------------~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~ 236 (267)
T 1sny_A 176 GSIQGNT--------------D-----GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVP 236 (267)
T ss_dssp GCSTTCC--------------S-----CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHH
T ss_pred ccccCCC--------------C-----CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCCCCCCHH
Confidence 7644321 0 01245999999999999998887 5999999999999999875422 2
Q ss_pred chHHHHHHHHc
Q 026852 206 FGAEVILNLIN 216 (232)
Q Consensus 206 ~~~~~~~~~~~ 216 (232)
..+..+...+.
T Consensus 237 ~~a~~~~~~~~ 247 (267)
T 1sny_A 237 TSTGQIVQTIS 247 (267)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33455555443
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=202.98 Aligned_cols=202 Identities=19% Similarity=0.243 Sum_probs=151.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCD 81 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d 81 (232)
..+++|+||||||+||||++++++|+++|++|++++|+..... +..+.+ .++.++++|++|.+++.++++ ++|
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D 90 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR-EVLPPV----AGLSVIEGSVTDAGLLERAFDSFKPT 90 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG-GGSCSC----TTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch-hhhhcc----CCceEEEeeCCCHHHHHHHHhhcCCC
Confidence 3478899999999999999999999999999999999765322 111111 468899999999999999999 999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
+|||+||.....+.++++ +++|+.++.++++++.+. +.++||++||... ++..... ..+.+|+. . .
T Consensus 91 ~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~-~~~~~~~--~~~~~E~~--~------~ 156 (330)
T 2pzm_A 91 HVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALC-YGRPATV--PIPIDSPT--A------P 156 (330)
T ss_dssp EEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGG-GCSCSSS--SBCTTCCC--C------C
T ss_pred EEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHH-hCCCccC--CCCcCCCC--C------C
Confidence 999999865322233444 899999999999999987 6789999999955 4432110 01334433 1 1
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
...|+.+|.++|.+++.+ +++++++||++++||.. .......++.....+. .++++. .++|+|
T Consensus 157 ~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 220 (330)
T 2pzm_A 157 FTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRL--AIGPIPTFYKRLKAGQKCFCSDT-VRDFLD 220 (330)
T ss_dssp CSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTC--CSSHHHHHHHHHHTTCCCCEESC-EECEEE
T ss_pred CChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCC--CCCHHHHHHHHHHcCCEEeCCCC-Eeccee
Confidence 356999999999988654 89999999999999985 2223444555555554 566666 788876
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=198.20 Aligned_cols=168 Identities=18% Similarity=0.187 Sum_probs=133.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC----CEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC----DGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----d~vi 84 (232)
|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|+++.++++++++++ |++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLS-TVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence 68999999999999999999999999999999875432 222222 457889999999999999998865 8999
Q ss_pred Eccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC--ccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 85 HTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS--IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 85 ~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
||||.. .+.+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------------ 139 (230)
T 3guy_A 78 HSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQ------------------ 139 (230)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTT------------------
T ss_pred EeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCC------------------
Confidence 999853 2345678899999999999999999988642 249999999977654332
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCCC
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+. ||++++|+||.+.|++...
T Consensus 140 ----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 183 (230)
T 3guy_A 140 ----ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET 183 (230)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh
Confidence 2559999999999999999884 8999999999999998653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=206.36 Aligned_cols=176 Identities=16% Similarity=0.140 Sum_probs=142.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch------hhhhhhcCCCCceEEEEcCCCCcchHHHhh
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.++... +..+++.....++.++++|++|.+++++++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 34789999999999999999999999999999999999865321 223334444568899999999999999887
Q ss_pred c-------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCC
Q 026852 78 D-------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMT 142 (232)
Q Consensus 78 ~-------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~ 142 (232)
+ ++|+||||||.. .+.+.+.+++++++|+.+++++++++.+.+ +.++||++||..+..+...
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~--- 197 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF--- 197 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC---
Confidence 6 789999999953 234456788999999999999999998864 3479999999876643111
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCc-eeCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGT-VIGPF 199 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~-v~g~~ 199 (232)
.....|+.||.+.+.+++.++.+. ||++++|+||+ +.|++
T Consensus 198 -----------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~ 240 (346)
T 3kvo_A 198 -----------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA 240 (346)
T ss_dssp -----------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH
T ss_pred -----------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH
Confidence 112559999999999999999884 89999999996 77754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-29 Score=203.93 Aligned_cols=171 Identities=18% Similarity=0.153 Sum_probs=136.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..++. ..++.++++|++|.+++.++++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLR-ELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHH-HHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 378899999999999999999999999999999999875332 122222 4578999999999999888876
Q ss_pred -CCCEEEEccccccc------CC----CCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -GCDGVFHTASPVIF------LS----DNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~------~~----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.... .. .+.|+..+++|+.++.++++++.+.+ ..++||++||..+..+...
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 151 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG------ 151 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC------
Confidence 57999999995321 11 12478899999999999999998864 2379999999977654332
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. +|++++|+||+|.|++..
T Consensus 152 ----------------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~ 193 (281)
T 3zv4_A 152 ----------------GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRG 193 (281)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CC
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccc
Confidence 2459999999999999998874 499999999999999754
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=203.93 Aligned_cols=173 Identities=17% Similarity=0.112 Sum_probs=140.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHH---CCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
.+++|++|||||+||||++++++|++ +|++|++++|+++... +..+++.. ...++.++++|++|++++.++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR-QLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH-HHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHH-HHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 46789999999999999999999999 8999999999875332 22223321 13578999999999999888764
Q ss_pred --------CCC--EEEEccccccc--------CCCCchhhhhHHHHHHHHHHHHHHHhhC-----CccEEEEecccceec
Q 026852 79 --------GCD--GVFHTASPVIF--------LSDNPQADIVDPAVMGTLNVLRSCAKVH-----SIKRVVLTSSIGAML 135 (232)
Q Consensus 79 --------~~d--~vi~~Ag~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~vSS~~~~~ 135 (232)
++| ++|||||.... .+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence 358 99999996421 3456788999999999999999999875 236899999997764
Q ss_pred cCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-CCcEEEEccCceeCCCC
Q 026852 136 LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-~i~~~~v~pg~v~g~~~ 200 (232)
+.+. ...|+.||.+.+.+++.++.+. +|++++|+||++.|++.
T Consensus 162 ~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~ 205 (259)
T 1oaa_A 162 PYKG----------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ 205 (259)
T ss_dssp CCTT----------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH
T ss_pred CCCC----------------------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchH
Confidence 4322 2559999999999999999886 59999999999999874
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=200.06 Aligned_cols=162 Identities=21% Similarity=0.263 Sum_probs=136.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHH-CCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----C
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----G 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~ 79 (232)
.++|++|||||+||||++++++|++ .|++|++.+|+++.. ..++.++++|++|.+++.++++ +
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 70 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIKNVS 70 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999 789999999887522 1346899999999999999886 6
Q ss_pred CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 80 CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 80 ~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
+|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------------- 136 (244)
T 4e4y_A 71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN-------------- 136 (244)
T ss_dssp EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT--------------
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC--------------
Confidence 79999999953 2355678899999999999999999998753 359999999977654332
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|+||+.
T Consensus 137 --------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 178 (244)
T 4e4y_A 137 --------SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY 178 (244)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh
Confidence 245999999999999999885 589999999999999864
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=205.49 Aligned_cols=171 Identities=18% Similarity=0.134 Sum_probs=137.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE-cCCCCcchhhhhhhc-CCCCceEEEEcCCCCcc------------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPNSPKTEHLRELD-GATERLHLFKANLLEEG------------ 71 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------ 71 (232)
+++|++|||||+||||+++++.|+++|++|++++ |+++... +..+++. ....++.++++|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN-ALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHH-HHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 6789999999999999999999999999999999 8864332 2223332 22457899999999999
Q ss_pred -----hHHHhhc-------CCCEEEEcccccc-----cCC--------------CCchhhhhHHHHHHHHHHHHHHHhhC
Q 026852 72 -----SFDSAVD-------GCDGVFHTASPVI-----FLS--------------DNPQADIVDPAVMGTLNVLRSCAKVH 120 (232)
Q Consensus 72 -----~~~~~~~-------~~d~vi~~Ag~~~-----~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~ 120 (232)
++.++++ ++|++|||||... +.+ .+.++..+++|+.+++++++++.+.+
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 165 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 165 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8888876 7899999998532 233 55678899999999999999998763
Q ss_pred ---C------ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEE
Q 026852 121 ---S------IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLV 188 (232)
Q Consensus 121 ---~------~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~ 188 (232)
+ .++||++||..+..+.+. ...|+.||.+.+.+.+.++.+ +||+++
T Consensus 166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 223 (291)
T 1e7w_A 166 AGTPAKHRGTNYSIINMVDAMTNQPLLG----------------------YTIYTMAKGALEGLTRSAALELAPLQIRVN 223 (291)
T ss_dssp HTSCGGGSCSCEEEEEECCTTTTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HhcCCCCCCCCcEEEEEechhhcCCCCC----------------------CchhHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence 3 479999999976644322 255999999999999988887 489999
Q ss_pred EEccCceeCCC
Q 026852 189 AIHPGTVIGPF 199 (232)
Q Consensus 189 ~v~pg~v~g~~ 199 (232)
+|+||+|.|++
T Consensus 224 ~v~PG~v~T~~ 234 (291)
T 1e7w_A 224 GVGPGLSVLVD 234 (291)
T ss_dssp EEEESSBCCGG
T ss_pred EEeeCCccCCc
Confidence 99999999997
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=203.92 Aligned_cols=170 Identities=20% Similarity=0.209 Sum_probs=136.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++|.++++++++
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA-EAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999874322 222222 2568899999999999988876
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+. .++||++||..+. +.+.
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~------------- 145 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG------------- 145 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH-------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC-------------
Confidence 4799999999532 234567789999999999999999999752 4799999999665 3111
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||+|+|++...
T Consensus 146 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 189 (263)
T 2a4k_A 146 ---------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG 189 (263)
T ss_dssp ---------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence 245899999888888888776 48999999999999997543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=201.18 Aligned_cols=173 Identities=14% Similarity=0.095 Sum_probs=142.7
Q ss_pred CCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 5 EGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.+++|++|||||+ +|||++++++|+++|++|++++|+.. .+.++++.....++.++++|++|.++++++++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF---KDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC---HHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH---HHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 3778999999998 66999999999999999999999872 23444443334568999999999999988876
Q ss_pred ---CCCEEEEccccccc----------CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCC
Q 026852 79 ---GCDGVFHTASPVIF----------LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||.... .+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 175 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS---- 175 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT----
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC----
Confidence 56999999996432 5567788899999999999999998863 3579999999977654332
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|++||++.+.+++.++.+ +||++++|+||+|.|++...
T Consensus 176 ------------------~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 219 (280)
T 3nrc_A 176 ------------------YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG 219 (280)
T ss_dssp ------------------THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG
T ss_pred ------------------chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc
Confidence 255999999999999998887 58999999999999998654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-29 Score=199.42 Aligned_cols=172 Identities=20% Similarity=0.180 Sum_probs=138.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCC--CCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANL--LEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~~~~~~~~~~~--- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..+..++.+|+ ++.+++.++++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLA-EVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHH-HHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999975433 222333222 24567777777 89988888765
Q ss_pred ----CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------ 163 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN------ 163 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC------
Confidence 689999999853 224567889999999999999999998753 4479999999877654322
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCceeCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.+ .+|++++|+||++.|++
T Consensus 164 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~ 205 (247)
T 3i1j_A 164 ----------------WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM 205 (247)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred ----------------cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence 245999999999999998887 47999999999999975
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=203.47 Aligned_cols=161 Identities=20% Similarity=0.167 Sum_probs=135.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|+.+.... ...+++|++|.+++.++++
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------------~~~~~~Dv~~~~~~~~~~~~~~~~~g 93 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------------DLHLPGDLREAAYADGLPGAVAAGLG 93 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------------SEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------------hhccCcCCCCHHHHHHHHHHHHHhcC
Confidence 688999999999999999999999999999999998764321 1344799999998887765
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 162 (266)
T 3uxy_A 94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG----------- 162 (266)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC-----------
Confidence 6899999999542 35667889999999999999999997753 4679999999977654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|+||+.
T Consensus 163 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 204 (266)
T 3uxy_A 163 -----------HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPML 204 (266)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHH
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHh
Confidence 2559999999999999998874 89999999999999864
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-29 Score=199.30 Aligned_cols=171 Identities=16% Similarity=0.169 Sum_probs=137.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCce-EEEEcCCCCcchHHHhh------c
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL-HLFKANLLEEGSFDSAV------D 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~------~ 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++ ..++ .++++|++|.+++.+++ .
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALD-RAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 68899999999999999999999999999999999875322 222222 2356 88999999999998887 4
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------- 153 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP----------- 153 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS-----------
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC-----------
Confidence 6899999998532 23345678899999999999999887643 4689999999866543221
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
.....|+.||.+.+.+++.++.+. |+++++++||+++||+.
T Consensus 154 ---------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~ 197 (254)
T 2wsb_A 154 ---------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMT 197 (254)
T ss_dssp ---------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHH
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhh
Confidence 012559999999999999988874 99999999999999864
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=200.59 Aligned_cols=169 Identities=18% Similarity=0.197 Sum_probs=138.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
+|++|||||+||||++++++|+++| +.|++++|+++... +..+++ ..++.++++|++|.++++++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK-KLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHH-HHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHH-HHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999999985 78888899865332 222222 3578999999999999998876
Q ss_pred CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.++|++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~----------- 146 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSS----------- 146 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCC-----------
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCC-----------
Confidence 6899999999632 24556788999999999999999997754 1279999999977654332
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc-CCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+|+||+...
T Consensus 147 -----------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~ 188 (254)
T 3kzv_A 147 -----------WGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVN 188 (254)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCC
T ss_pred -----------cchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHH
Confidence 2559999999999999999885 9999999999999998754
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=206.13 Aligned_cols=174 Identities=13% Similarity=0.086 Sum_probs=139.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+++... +..+++.....++.++++|++|.+++.++++
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE-ETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHH-HHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 378899999999999999999999999999999999875332 2233333334578999999999999988876
Q ss_pred -CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||.... .+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+
T Consensus 107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------- 175 (272)
T 1yb1_A 107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP----------- 175 (272)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----------
T ss_pred CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC-----------
Confidence 68999999985422 2345678899999999999999987753 568999999997653311
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc------CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN------GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~------~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.||++.+.+++.++.+. |+++++|+||+++||+..
T Consensus 176 -----------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~ 222 (272)
T 1yb1_A 176 -----------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 222 (272)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred -----------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence 12559999999999999888864 899999999999999753
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=199.24 Aligned_cols=162 Identities=19% Similarity=0.143 Sum_probs=134.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
|++|++|||||+||||++++++|+++|++|++++|++++.. ....++++|++|.+++.++++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999976422 135678999999999888775
Q ss_pred --CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 --GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 --~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 139 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS---------- 139 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC----------
Confidence 6899999999532 233456789999999999999999998752 369999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-----CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-----~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ||++++|+||+++||+.
T Consensus 140 ------------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~ 183 (236)
T 1ooe_A 140 ------------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN 183 (236)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch
Confidence 2559999999999999998875 49999999999999864
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=202.47 Aligned_cols=175 Identities=17% Similarity=0.129 Sum_probs=138.3
Q ss_pred CCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 4 GEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
..+++|++|||||+ ||||++++++|+++|++|++++|+.... +.++++.....++.++++|++|.++++++++
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK--DRITEFAAEFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH--HHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 34788999999998 9999999999999999999999985322 3333333223458899999999999998876
Q ss_pred ----CCCEEEEccccccc----------CCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCC
Q 026852 79 ----GCDGVFHTASPVIF----------LSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||.... .+.++++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 163 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN---- 163 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC----
Confidence 56999999986431 44567889999999999999999998753 469999999877654332
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++...
T Consensus 164 ------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 207 (271)
T 3ek2_A 164 ------------------YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG 207 (271)
T ss_dssp ------------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC
T ss_pred ------------------ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc
Confidence 245999999999999998887 48999999999999998654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=197.55 Aligned_cols=162 Identities=16% Similarity=0.222 Sum_probs=133.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|++++... +..+++|++|.++++++++
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHHHHHHc
Confidence 4778999999999999999999999999999999998764321 1138899999999988876
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+.++.+.
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 149 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN---------- 149 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC----------
Confidence 5799999998532 34567789999999999999999998753 4589999999977654322
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||++.|++.
T Consensus 150 ------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 191 (247)
T 1uzm_A 150 ------------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT 191 (247)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred ------------ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccch
Confidence 245999999999999988887 599999999999999864
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=196.51 Aligned_cols=156 Identities=18% Similarity=0.149 Sum_probs=132.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 82 (232)
+++|++|||||+||||++++++|+++|++|++++|+.+ +|++|+++++++++ ++|+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~g~id~ 62 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETIGAFDH 62 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHhCCCCE
Confidence 67899999999999999999999999999999998763 89999999998876 6799
Q ss_pred EEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 83 VFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 83 vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
+|||||.. .+.+.+.++..+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------------- 126 (223)
T 3uce_A 63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN---------------- 126 (223)
T ss_dssp EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT----------------
T ss_pred EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC----------------
Confidence 99999954 2245567889999999999999999999752 469999999977654322
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHhcC-CcEEEEccCceeCCCCCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKENG-IDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~~~-i~~~~v~pg~v~g~~~~~~~ 204 (232)
...|+.||.+.+.+++.++.+++ |++++|+||+++||+.....
T Consensus 127 ------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~ 170 (223)
T 3uce_A 127 ------TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMN 170 (223)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSC
T ss_pred ------chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcc
Confidence 25599999999999999999864 99999999999999876543
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-28 Score=201.67 Aligned_cols=211 Identities=19% Similarity=0.193 Sum_probs=151.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
|+||||||+||||++++++|+++|++|++++|...... ...+.+.. ...++.++++|++|.+++.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT-THHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcch-hHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 37999999999999999999999999999987543221 11221111 12457889999999999999887 4899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+||.... ...+++.+.+++|+.++.++++++.+. +.++||++||... ++... ..+.+|+....+ ....
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~-~g~~~----~~~~~e~~~~~~-----~~~~ 148 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATV-YGDNP----KIPYVESFPTGT-----PQSP 148 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGG-GCSCC----SSSBCTTSCCCC-----CSSH
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHH-hCCCC----CCCcCcccCCCC-----CCCh
Confidence 9986421 122345678999999999999998887 6789999999854 44322 223444432211 1256
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCcEEEEccCceeCCCCCC------C--CcchHHHHHHHHcCC-----CC------CCcc
Q 026852 165 YSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQP------I--LNFGAEVILNLINGN-----IY------SAAI 224 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~-~i~~~~v~pg~v~g~~~~~------~--~~~~~~~~~~~~~~~-----~~------~~~~ 224 (232)
|+.||.++|.+++.++.+. +++++++||++++||.... . .......+.+...+. ++ .++.
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 228 (338)
T 1udb_A 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCc
Confidence 9999999999999998876 8999999999999985321 1 122334444433322 22 3678
Q ss_pred ceeeeec
Q 026852 225 QDRIMIY 231 (232)
Q Consensus 225 ~~~~~~~ 231 (232)
+.|+|+|
T Consensus 229 ~~~~~i~ 235 (338)
T 1udb_A 229 GVRDYIH 235 (338)
T ss_dssp CEECEEE
T ss_pred eeeeeEE
Confidence 9999987
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-28 Score=202.07 Aligned_cols=209 Identities=18% Similarity=0.135 Sum_probs=157.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCC-------CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRG-------YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
.+++|+||||||+||||++++++|+++| ++|++++|++..... ....++.++++|++|.+++.+++
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKLV 83 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHHH
Confidence 3678999999999999999999999999 899999998754321 12357889999999999999999
Q ss_pred c-CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 78 D-GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 78 ~-~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+ ++|+|||+||.....+.+++++.+++|+.++.++++++.+.. ..++||++||... ++... ..+.+|+..
T Consensus 84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~-~~~~~----~~~~~E~~~ 158 (342)
T 2hrz_A 84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV-FGAPL----PYPIPDEFH 158 (342)
T ss_dssp HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-CCSSC----CSSBCTTCC
T ss_pred hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh-hCCCC----CCCcCCCCC
Confidence 4 899999999975433345678899999999999999998862 2689999999954 44321 123455544
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeC-CCCCCC--CcchHHHHHHHHcCC---CCCCccce
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG-PFFQPI--LNFGAEVILNLINGN---IYSAAIQD 226 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g-~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~ 226 (232)
..+ ...|+.||.++|.+++.++.+.+++.+++||+.+++ |..... ......++...+.+. +...+...
T Consensus 159 ~~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (342)
T 2hrz_A 159 TTP------LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232 (342)
T ss_dssp CCC------SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred CCC------cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence 332 356999999999999999888899999999999998 654221 123345555566665 33444555
Q ss_pred eeeec
Q 026852 227 RIMIY 231 (232)
Q Consensus 227 ~~~~~ 231 (232)
++|+|
T Consensus 233 ~~~~~ 237 (342)
T 2hrz_A 233 HWHAS 237 (342)
T ss_dssp EEEEC
T ss_pred eeeEe
Confidence 55654
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=205.19 Aligned_cols=172 Identities=19% Similarity=0.133 Sum_probs=138.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
++++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.+++.++++
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK-ATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999875332 222222211 3578999999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|+||||||... ..+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 173 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF-------- 173 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT--------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC--------
Confidence 4599999998532 34556788999999999999999987753 3479999999976654322
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+++|+.
T Consensus 174 --------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 174 --------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 255999999999999999888 79999999999999983
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=201.53 Aligned_cols=200 Identities=20% Similarity=0.272 Sum_probs=147.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-----CCEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-----CDGV 83 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~d~v 83 (232)
+||||||+|+||++++++|+++| ++|++++|++.... ...+.. +. +++|++|.+.+.+++++ +|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~~~----~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---FVNLVD----LN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---GHHHHT----SC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch---hhhcCc----ce-eccccccHHHHHHHHhccccCCCcEE
Confidence 48999999999999999999999 99999999875421 111211 22 67899999999999875 9999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
||+||.... ...++.+.+++|+.++.++++++.+. +. ++|++||... ++... ..+.+|+....| ..
T Consensus 73 i~~a~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v-~g~~~----~~~~~E~~~~~p------~~ 138 (310)
T 1eq2_A 73 FHEGACSST-TEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAAT-YGGRT----SDFIESREYEKP------LN 138 (310)
T ss_dssp EECCSCCCT-TCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGG-GTTCC----SCBCSSGGGCCC------SS
T ss_pred EECcccccC-cccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHH-hCCCC----CCCCCCCCCCCC------CC
Confidence 999996543 45677889999999999999999987 66 9999999854 44322 223344432222 35
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC---CcchHHHHHHHHcCC---CCCCccc-eeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGN---IYSAAIQ-DRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 231 (232)
.|+.+|..+|.+++.++.++|++++++|||+++||..... ......++.....++ +++++.+ .|+|+|
T Consensus 139 ~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~ 213 (310)
T 1eq2_A 139 VYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 213 (310)
T ss_dssp HHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEE
Confidence 6999999999999999888899999999999999986432 234455666666666 5778888 999987
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=201.96 Aligned_cols=173 Identities=14% Similarity=0.112 Sum_probs=138.4
Q ss_pred CCCCCCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc
Q 026852 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
||. .+++|++||||| +||||++++++|+++|++|++++|++++...+..+++ ..++.++++|++|+++++++++
T Consensus 1 Mm~-~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~ 76 (269)
T 2h7i_A 1 MTG-LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAG 76 (269)
T ss_dssp -CC-TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHH
T ss_pred Ccc-ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHH
Confidence 454 478899999999 9999999999999999999999998743211222222 3467899999999999988876
Q ss_pred ----------CCCEEEEcccccc----------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccC
Q 026852 79 ----------GCDGVFHTASPVI----------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLN 137 (232)
Q Consensus 79 ----------~~d~vi~~Ag~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~ 137 (232)
++|++|||||... +.+.+++++.+++|+.++.++++++.+.+. .++||++||... .+.
T Consensus 77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~ 155 (269)
T 2h7i_A 77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAM 155 (269)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCC
T ss_pred HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-ccc
Confidence 7899999998542 234567889999999999999999998752 379999998754 221
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
+. ...|+.||++.+.+++.++.+ +||++++|+||+|.|++.
T Consensus 156 ~~----------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 199 (269)
T 2h7i_A 156 PA----------------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAM 199 (269)
T ss_dssp TT----------------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHH
T ss_pred Cc----------------------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhh
Confidence 11 255999999999999998887 499999999999999853
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=200.19 Aligned_cols=182 Identities=19% Similarity=0.246 Sum_probs=141.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+..+.. +..+++.. ...++.++++|++|.++++++++
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV-EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH-HHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhH-HHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 377899999999999999999999999999999999775433 22222211 13568999999999999988776
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+ + .++||++||..+..+....
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------- 162 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------- 162 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-------
Confidence 3799999998532 23556778899999999999999988763 2 3799999998665432110
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
. . .......|+.||.+.+.+++.++.+ +|+++++++||+++|++...
T Consensus 163 --~---~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 212 (265)
T 1h5q_A 163 --L---N---GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH 212 (265)
T ss_dssp --T---T---EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred --c---c---ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc
Confidence 0 0 0011356999999999999998887 48999999999999997654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=202.22 Aligned_cols=195 Identities=17% Similarity=0.198 Sum_probs=149.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
+|+||||||+|+||++++++|+++|++|++++|+. ++|++|.+++.++++ ++|+|||
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence 47999999999999999999999999999887753 279999999999998 8999999
Q ss_pred ccccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc-c
Q 026852 86 TASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN-K 162 (232)
Q Consensus 86 ~Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~ 162 (232)
+||.... ....++.+.+++|+.++.++++++.+. +.+++|++||... |+... ..+.+|+.+.... ... .
T Consensus 62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~v-yg~~~----~~~~~E~~~~~~~--~~p~~ 133 (321)
T 1e6u_A 62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCI-YPKLA----KQPMAESELLQGT--LEPTN 133 (321)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGG-SCTTC----CSSBCGGGTTSSC--CCGGG
T ss_pred cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHH-cCCCC----CCCcCccccccCC--CCCCC
Confidence 9986431 123456788999999999999999887 6789999999854 44322 2234444321100 011 2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHc----C-C---CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLIN----G-N---IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~----~-~---~~~~~~~~~~~~~ 231 (232)
..|+.+|..+|.+++.++++++++++++||++++||...... .....++..... | . +++++.+.++|+|
T Consensus 134 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~ 213 (321)
T 1e6u_A 134 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLH 213 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEE
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEE
Confidence 469999999999999998888999999999999999875321 234445555443 3 3 5788999999987
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-29 Score=203.30 Aligned_cols=175 Identities=19% Similarity=0.192 Sum_probs=138.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||+++++.|+++|++|++++|++++.. +..+++.....++.++++|++|.++++++++
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999888764322 2333343335678999999999999998874
Q ss_pred -CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------- 189 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG---------- 189 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC----------
Confidence 6899999998542 23456788999999999999999988753 4579999999977655332
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ .|+++++++||+++|++...
T Consensus 190 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 233 (285)
T 2c07_A 190 ------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK 233 (285)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence 245999999999999988877 49999999999999997543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=200.27 Aligned_cols=207 Identities=20% Similarity=0.115 Sum_probs=147.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHH-CCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.++|++|||||+||||++++++|++ .|++|++++|+.++.. +..+++.....++.++++|++|.+++.++++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ-AAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHH-HHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4678999999999999999999999 9999999999865332 2233333334578999999999999998887
Q ss_pred -CCCEEEEcccccccC----C-CCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCC------Ccc
Q 026852 79 -GCDGVFHTASPVIFL----S-DNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMT------PDV 145 (232)
Q Consensus 79 -~~d~vi~~Ag~~~~~----~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~------~~~ 145 (232)
++|+||||||..... . .+.++..+++|+.++.++++++.+.+. .++||++||..+.++.....+ ...
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence 789999999964321 1 256788999999999999999998742 369999999877643110000 000
Q ss_pred ccccCC----------------CCChhhccccchhHHHHHHHHHHHHHHHHHh-------cCCcEEEEccCceeCCCCCC
Q 026852 146 VIDETW----------------FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-------NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 146 ~~~e~~----------------~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-------~~i~~~~v~pg~v~g~~~~~ 202 (232)
.+.|.. ...+. .....|+.||.+.+.+++.++.+ .|+++++|+||+|.|++...
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 161 TITEEELVGLMNKFVEDTKKGVHQKEG---WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCTTTTT---CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred ccchhhhhhhhhhhhhhhcccccccCC---CccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 000000 00000 01255999999999999888776 58999999999999998654
Q ss_pred C----CcchHHHHHHHHc
Q 026852 203 I----LNFGAEVILNLIN 216 (232)
Q Consensus 203 ~----~~~~~~~~~~~~~ 216 (232)
. .+..+..+..++.
T Consensus 238 ~~~~~~~~~a~~~~~l~~ 255 (276)
T 1wma_A 238 KATKSPEEGAETPVYLAL 255 (276)
T ss_dssp TCSBCHHHHTHHHHHHHS
T ss_pred cccCChhHhhhhHhhhhc
Confidence 2 2234455555554
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=206.71 Aligned_cols=171 Identities=18% Similarity=0.134 Sum_probs=137.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE-cCCCCcchhhhhhhc-CCCCceEEEEcCCCCcc------------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPNSPKTEHLRELD-GATERLHLFKANLLEEG------------ 71 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------ 71 (232)
+++|++|||||+||||+++++.|+++|++|++++ |++++.. +..+++. ....++.++++|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN-ALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 122 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence 6789999999999999999999999999999999 8764332 2223332 22457899999999999
Q ss_pred -----hHHHhhc-------CCCEEEEcccccc-----cCC--------------CCchhhhhHHHHHHHHHHHHHHHhhC
Q 026852 72 -----SFDSAVD-------GCDGVFHTASPVI-----FLS--------------DNPQADIVDPAVMGTLNVLRSCAKVH 120 (232)
Q Consensus 72 -----~~~~~~~-------~~d~vi~~Ag~~~-----~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~ 120 (232)
+++++++ ++|+||||||... +.+ .+.++..+++|+.+++++++++.+.+
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888876 7899999998532 223 45678899999999999999998763
Q ss_pred ---C------ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEE
Q 026852 121 ---S------IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLV 188 (232)
Q Consensus 121 ---~------~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~ 188 (232)
+ .++||++||..+..+.+. ...|+.||.+.+.+++.++.+. ||+++
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~el~~~gIrvn 260 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPLLG----------------------YTIYTMAKGALEGLTRSAALELAPLQIRVN 260 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HhcCCcCCCCCcEEEEECchhhccCCCC----------------------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 3 579999999976644322 2459999999999999988874 89999
Q ss_pred EEccCceeCCC
Q 026852 189 AIHPGTVIGPF 199 (232)
Q Consensus 189 ~v~pg~v~g~~ 199 (232)
+|+||+|.|++
T Consensus 261 ~v~PG~v~T~~ 271 (328)
T 2qhx_A 261 GVGPGLSVLVD 271 (328)
T ss_dssp EEEESSBSCCC
T ss_pred EEecCcccCCc
Confidence 99999999998
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=199.40 Aligned_cols=178 Identities=20% Similarity=0.165 Sum_probs=143.6
Q ss_pred CCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
.+++|++|||||+ +|||++++++|+++|++|++++|+......+.++++.. ...++.++++|++|.++++++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 4788999999999 99999999999999999999999876542333333321 14678999999999999988876
Q ss_pred ----CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 169 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP------- 169 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-------
Confidence 5699999999542 23567788999999999999999997753 4579999999877654311
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~ 202 (232)
.....|+.||++.+.+++.++.++ .+++++++||++.|++.+.
T Consensus 170 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~ 214 (267)
T 3gdg_A 170 -------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF 214 (267)
T ss_dssp -------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG
T ss_pred -------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh
Confidence 012559999999999999999885 3899999999999998653
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=203.80 Aligned_cols=174 Identities=21% Similarity=0.198 Sum_probs=137.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhh---cCCCCceEEEEcCCCCcchHHHhhcC--
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLREL---DGATERLHLFKANLLEEGSFDSAVDG-- 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (232)
++|++|||||+||||++++++|+++|++|++++|+...... ..++.. .....++.++++|++|.+++.++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 36899999999999999999999999999999887654332 111111 11235789999999999999999875
Q ss_pred ---CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 80 ---CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 80 ---~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
+|++|||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~--------- 151 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF--------- 151 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT---------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC---------
Confidence 79999999853 234556788999999999999999987753 4689999999977654322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.|++...
T Consensus 152 -------------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~ 195 (327)
T 1jtv_A 152 -------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK 195 (327)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred -------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence 245999999999999999886 69999999999999998643
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=200.23 Aligned_cols=174 Identities=22% Similarity=0.214 Sum_probs=139.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-CCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+++|++|||||+||||++++++|+++|++|++++| +++.. .+..+++.....++.++++|++|.+++.++++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAA-EEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999 43322 12223333334578899999999999998887
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEeccccee-ccCCCCCCCcccccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAM-LLNETPMTPDVVIDE 149 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~-~~~~~~~~~~~~~~e 149 (232)
++|+||||||... +.+.+.++..+++|+.++.++++++.+.+. .++||++||..+. .+.+.
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------- 166 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN---------- 166 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS----------
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCC----------
Confidence 7899999998532 345567789999999999999999988742 2799999998665 22211
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+. |+++++++||+++|++..
T Consensus 167 ------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~ 209 (274)
T 1ja9_A 167 ------------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD 209 (274)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence 2459999999999999988874 999999999999998643
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=194.22 Aligned_cols=168 Identities=21% Similarity=0.191 Sum_probs=128.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
.+|++|||||+||||++++++|+++|++|++++|++++.. +..+++ .++.++++|++|.+++.++++ +
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ-ALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999864321 112222 267899999999999888775 6
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+||||||... +.+.+++++.+++|+.++.++++.+.+.+ +.++||++||..+..+.+.
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 146 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG------------ 146 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT------------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC------------
Confidence 899999998532 23556788999999999999998887643 4689999999866543221
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||++.|++..
T Consensus 147 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 189 (234)
T 2ehd_A 147 ----------GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG 189 (234)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------
T ss_pred ----------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc
Confidence 245999999999998888776 5899999999999998754
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=193.91 Aligned_cols=163 Identities=23% Similarity=0.231 Sum_probs=133.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+|++|||||+||||++++++|+++|++|++++|++++ ..+++ .+.++++|++| +++.++++ ++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~i 71 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----AAQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGGL 71 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999999998753 22222 17789999999 88777654 78
Q ss_pred CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|++|||||... +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+...
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 138 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP------------- 138 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC-------------
Confidence 99999998532 24556789999999999999999998753 4589999999976643210
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~ 200 (232)
.....|+.||.+.+.+.+.++.+. ||++++|+||+++|++.
T Consensus 139 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 182 (239)
T 2ekp_A 139 -------VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFT 182 (239)
T ss_dssp -------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchh
Confidence 012459999999999999988874 99999999999999974
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=217.62 Aligned_cols=213 Identities=19% Similarity=0.303 Sum_probs=161.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch-HHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~v 83 (232)
+++|+||||||+||||++++++|+++ |++|++++|++..... +. ...+++++++|++|.++ +.++++++|+|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~-----~~-~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V 386 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR-----FL-NHPHFHFVEGDISIHSEWIEYHVKKCDVV 386 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG-----GT-TCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh-----hc-cCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence 56789999999999999999999998 8999999998754321 11 13578999999999875 77788899999
Q ss_pred EEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhc-ccc
Q 026852 84 FHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC-KEN 161 (232)
Q Consensus 84 i~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~ 161 (232)
||+||.... ....++.+.+++|+.++.++++++.+. + +++|++||... ++... ...++|+.......+ ...
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~v-yg~~~----~~~~~E~~~~~~~~p~~~p 459 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEV-YGMCS----DKYFDEDHSNLIVGPVNKP 459 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGG-GBTCC----SSSBCTTTCCEEECCTTCT
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHH-cCCCC----CcccCCCccccccCcccCC
Confidence 999986432 123456788999999999999999887 5 89999999854 44322 223444432110000 012
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC-------CCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-------ILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++.+++++++++|||+|+||.... .......++.+...+. +++++.+.|+|+|
T Consensus 460 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 539 (660)
T 1z7e_A 460 RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 539 (660)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEE
Confidence 35699999999999999988889999999999999998643 1234456666777776 5678889999987
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=201.66 Aligned_cols=172 Identities=17% Similarity=0.145 Sum_probs=136.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-----CCCceEEEEcCCCCcchHHHhhc
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
..+++|++|||||+||||++++++|+++|++|++++|+.++.. ...+++.. ...++.++++|++|.+++.++++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK-SAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 4578899999999999999999999999999999999865332 22222221 24578999999999999998876
Q ss_pred -------CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCC
Q 026852 79 -------GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 -------~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|+||||||.. ...+.+.++..+++|+.++.++++++.+.+ +.++||++||.. ..+.+.
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~---- 167 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL---- 167 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT----
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc----
Confidence 489999999843 224456778899999999999999988742 347999999986 433221
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~ 199 (232)
...|+.+|.+.+.+.+.++.+. |+++++|+||+++||.
T Consensus 168 ------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 168 ------------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred ------------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 2448888888888888887774 9999999999999993
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=201.59 Aligned_cols=171 Identities=23% Similarity=0.183 Sum_probs=138.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+.++.. +..+++ ..++.++++|++|.+++.++++
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK-ALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG 102 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 378899999999999999999999999999999999875432 223333 3578999999999999998876
Q ss_pred CCCEEEEc-ccccc----------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---------CccEEEEecccceeccCC
Q 026852 79 GCDGVFHT-ASPVI----------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---------SIKRVVLTSSIGAMLLNE 138 (232)
Q Consensus 79 ~~d~vi~~-Ag~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~vSS~~~~~~~~ 138 (232)
++|++||| ||... ..+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+
T Consensus 103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 182 (281)
T 3ppi_A 103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI 182 (281)
T ss_dssp EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence 56999999 44211 23344578999999999999999987653 346999999997765433
Q ss_pred CCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 139 TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 139 ~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
. ...|+.||++.+.+++.++.+. ||++++|+||+|.|++..
T Consensus 183 ~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 226 (281)
T 3ppi_A 183 G----------------------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME 226 (281)
T ss_dssp T----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred C----------------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh
Confidence 2 2559999999999999988874 899999999999998654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-27 Score=199.14 Aligned_cols=201 Identities=21% Similarity=0.245 Sum_probs=147.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 82 (232)
.+++|+||||||+||||++++++|+++|++|++++|+..... +.+.. ..++.++++|++|.+++.+++++ +|+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR-EHLKD----HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGSCC----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch-hhHhh----cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 357789999999999999999999999999999999865322 11111 14688999999999999999988 999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
|||+||........+++ +++|+.++.++++++.+. +.++||++||... ++........ +.+|+. . ..
T Consensus 93 vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~-~g~~~~~~~~-~~~E~~--~------p~ 159 (333)
T 2q1w_A 93 VVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALC-YGVKPIQQPV-RLDHPR--N------PA 159 (333)
T ss_dssp EEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG-GCSCCCSSSB-CTTSCC--C------CT
T ss_pred EEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHH-hCCCcccCCC-CcCCCC--C------CC
Confidence 99999965322223443 899999999999999986 7789999999854 4411000001 344443 1 12
Q ss_pred -hhHHHHHHHHHHHHHH-HHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 163 -EWYSLAKTLAEEAAWK-FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 163 -~~y~~sK~~~~~~~~~-~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
..|+.+|.++|.+++. ++ +++++||++++||.. . ....+.++.....+. .++ +.+.++|+|
T Consensus 160 ~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 223 (333)
T 2q1w_A 160 NSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRN-V-SGPLPIFFQRLSEGKKCFV-TKARRDFVF 223 (333)
T ss_dssp TCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTC-C-SSHHHHHHHHHHTTCCCEE-EECEECEEE
T ss_pred CCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCC-c-CcHHHHHHHHHHcCCeeeC-CCceEeeEE
Confidence 4599999999999876 53 899999999999982 2 234455555566654 555 677888876
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=196.55 Aligned_cols=171 Identities=18% Similarity=0.230 Sum_probs=137.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
+|++|||||+||||++++++|+++|++|+++ +|+++... +..+++.....++.++++|++|.++++++++ +
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999985 67654322 2222232224578899999999999998886 6
Q ss_pred CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+||||||... ..+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+.++.+.
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 147 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG------------ 147 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT------------
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC------------
Confidence 899999998542 23456778899999999999999998863 4679999999977655322
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +|+++++++||+++||+..
T Consensus 148 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (244)
T 1edo_A 148 ----------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA 190 (244)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred ----------CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh
Confidence 245999999999999888877 5899999999999998653
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-28 Score=198.85 Aligned_cols=182 Identities=16% Similarity=0.094 Sum_probs=141.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-CCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-CDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~vi~~ 86 (232)
+|+||||| +|+||++++++|+++|++|++++|+++.. ..+++++++|++|.+++.+++++ +|+|||+
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 47899999 59999999999999999999999987642 24678999999999999999987 9999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
||+.. .+++..+++|+.++.++++++.+. +.++||++||.. .|+... ..+++|+....| ...|+
T Consensus 71 a~~~~----~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~-vyg~~~----~~~~~E~~~~~p------~~~Y~ 134 (286)
T 3gpi_A 71 VAASE----YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTG-VYGQEV----EEWLDEDTPPIA------KDFSG 134 (286)
T ss_dssp HHHHH----HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGG-GCCCCC----SSEECTTSCCCC------CSHHH
T ss_pred CCCCC----CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccE-EEcCCC----CCCCCCCCCCCC------CChhh
Confidence 98643 334677889999999999999876 778999999994 444332 344556554433 35699
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
.+|.++|.+ .. + ++++++||++++||... .++.+.+. . ..+.+.+.++|+|
T Consensus 135 ~sK~~~E~~-~~----~-~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~ 186 (286)
T 3gpi_A 135 KRMLEAEAL-LA----A-YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIH 186 (286)
T ss_dssp HHHHHHHHH-GG----G-SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEE
T ss_pred HHHHHHHHH-Hh----c-CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEE
Confidence 999999998 43 3 99999999999999853 23444444 4 5577888899887
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=190.77 Aligned_cols=161 Identities=25% Similarity=0.294 Sum_probs=130.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCce-EEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL-HLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++|+||||||+||||++++++|+++|++|++++|++++.. .+.. .++ +++++|++ +++.++++++|+|
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~-----~~~~--~~~~~~~~~Dl~--~~~~~~~~~~D~v 88 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP-----ELRE--RGASDIVVANLE--EDFSHAFASIDAV 88 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-----HHHH--TTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH-----HHHh--CCCceEEEcccH--HHHHHHHcCCCEE
Confidence 478899999999999999999999999999999999975432 1111 257 89999999 8888999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
||+||... .+++++.+++|+.++.++++++.+. +.++||++||.+...+. ..+ ....
T Consensus 89 i~~ag~~~---~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~------------~~~-------~~~~ 145 (236)
T 3e8x_A 89 VFAAGSGP---HTGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDPD------------QGP-------MNMR 145 (236)
T ss_dssp EECCCCCT---TSCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCGG------------GSC-------GGGH
T ss_pred EECCCCCC---CCCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCCC------------CCh-------hhhh
Confidence 99998643 3668899999999999999999887 78899999996543221 000 1235
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
.|+.+|.++|.+++ +++++++++|||+++|+...
T Consensus 146 ~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~ 179 (236)
T 3e8x_A 146 HYLVAKRLADDELK----RSSLDYTIVRPGPLSNEEST 179 (236)
T ss_dssp HHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCC
T ss_pred hHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCC
Confidence 69999999999874 68999999999999998753
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-28 Score=196.18 Aligned_cols=174 Identities=18% Similarity=0.156 Sum_probs=136.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------ 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 79 (232)
+++|++|||||+||||++++++|+++|++|++++|+++... ...+.+.....++.++++|++|.+++.+++++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADE-KAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHH-HHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999999876533 22222222235789999999999999888764
Q ss_pred -CCEEEEccccccc-------CCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 80 -CDGVFHTASPVIF-------LSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 80 -~d~vi~~Ag~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
+|+||||||.... .+.+.+++.+++|+.++.++++.+.+.+ +.++||++||..+..+...
T Consensus 111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------- 181 (279)
T 3ctm_A 111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP--------- 181 (279)
T ss_dssp CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------
T ss_pred CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC---------
Confidence 8999999985422 2234567899999999888877776643 5689999999866543100
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
.....|+.||.+.+.+++.++.++ + ++++++||++.|++..
T Consensus 182 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~ 225 (279)
T 3ctm_A 182 -----------QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD 225 (279)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred -----------CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence 012559999999999999998874 7 9999999999999864
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-28 Score=195.68 Aligned_cols=165 Identities=21% Similarity=0.295 Sum_probs=136.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|++.+.. ..+++++++|++|.+++.++++++|+|||+||
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 72 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGG 72 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHcCCCEEEECCc
Confidence 68999999999999999999999999999999875421 13578999999999999999999999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.. ..+.++..+++|+.++.++++++.+. +.++||++||...+...+. ..+++|+....| ...|+.+
T Consensus 73 ~~---~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~----~~~~~E~~~~~~------~~~Y~~s 138 (267)
T 3ay3_A 73 VS---VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPR----TTRIDTEVPRRP------DSLYGLS 138 (267)
T ss_dssp CC---SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBT----TSCBCTTSCCCC------CSHHHHH
T ss_pred CC---CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCC----CCCCCCCCCCCC------CChHHHH
Confidence 65 34567889999999999999999886 7789999999965432221 234455543332 2569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIG 197 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g 197 (232)
|...|.+++.++.+++++++++|||++++
T Consensus 139 K~~~e~~~~~~~~~~gi~~~~lrp~~v~~ 167 (267)
T 3ay3_A 139 KCFGEDLASLYYHKFDIETLNIRIGSCFP 167 (267)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEECBCSS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeceeecC
Confidence 99999999988888899999999999963
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=208.79 Aligned_cols=188 Identities=18% Similarity=0.189 Sum_probs=143.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHC---CCeEEEEEcCCCCcch-hhhhhhcC-------------CCCceEEEEcC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQR---GYTVKATVRDPNSPKT-EHLRELDG-------------ATERLHLFKAN 66 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~---g~~V~~~~r~~~~~~~-~~~~~~~~-------------~~~~~~~~~~D 66 (232)
...++|+||||||+|+||++++++|++. |++|++++|+++.... +.+.+... ...++.++++|
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 3467899999999999999999999999 8999999998764311 11111111 12579999999
Q ss_pred CC------CcchHHHhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCC
Q 026852 67 LL------EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 67 ~~------~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~ 140 (232)
++ +.+.+.++++++|+|||+||.... .++++.+++|+.++.++++++.+. +.++||++||.. .++...
T Consensus 149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~-v~~~~~- 222 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTAD-VGAAIE- 222 (478)
T ss_dssp TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB---SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGG-GGTTSC-
T ss_pred CCCcccCCCHHHHHHHHcCCCEEEECccccCC---cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehh-hcCccC-
Confidence 98 666889999999999999997643 566788999999999999999886 778999999984 444322
Q ss_pred CCCccccccCCCCChhh-----ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 141 MTPDVVIDETWFSNPVL-----CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~-----~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
...++|+....+.. .....+.|+.||.++|.+++.++.+.|++++++|||+|+||..
T Consensus 223 ---~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~ 284 (478)
T 4dqv_A 223 ---PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS 284 (478)
T ss_dssp ---TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred ---CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence 22333333211110 0111245999999999999999888899999999999999854
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=191.67 Aligned_cols=163 Identities=17% Similarity=0.132 Sum_probs=130.6
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GC 80 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~ 80 (232)
..+++|++|||||+||||++++++|+++|++|++++|+++ .++++ .++.++ +|+ .++++++++ ++
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~i 82 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-----LLKRS----GHRYVV-CDL--RKDLDLLFEKVKEV 82 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHT----CSEEEE-CCT--TTCHHHHHHHSCCC
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-----HHHhh----CCeEEE-eeH--HHHHHHHHHHhcCC
Confidence 3578899999999999999999999999999999999862 22232 256677 999 445555544 78
Q ss_pred CEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 DGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+||||||.. .+.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 149 (249)
T 1o5i_A 83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN------------- 149 (249)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC-------------
Confidence 9999999853 224567789999999999999998887753 4579999999976643221
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+.+.++.+ +||++++|+||+++||+.
T Consensus 150 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 191 (249)
T 1o5i_A 150 ---------LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV 191 (249)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcc
Confidence 255999999999999888877 599999999999999974
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=196.12 Aligned_cols=171 Identities=21% Similarity=0.240 Sum_probs=135.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhhcCCCCceEE-EEcCCCCcchHHHhhc-------
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHL-FKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~------- 78 (232)
+|++|||||+||||++++++|+++|++|+++ +|++++.. +..+++.....++.+ +++|++|.++++++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAE-EVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHH-HHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence 3789999999999999999999999999998 77764322 222233222345666 9999999999988865
Q ss_pred CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 ~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|+||||||... ..+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+.++.+.
T Consensus 80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------- 148 (245)
T 2ph3_A 80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG----------- 148 (245)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-----------
Confidence 7899999998532 24556788999999999999998887753 4589999999877654322
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHhc---CCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~---~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+. |+++++++||+++||+..
T Consensus 149 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 191 (245)
T 2ph3_A 149 -----------QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE 191 (245)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchh
Confidence 2559999999999999888874 899999999999998754
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=202.79 Aligned_cols=210 Identities=18% Similarity=0.164 Sum_probs=156.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC----CCC-ceEEEEcCCCCcchHHHhhcC--CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG----ATE-RLHLFKANLLEEGSFDSAVDG--CD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~--~d 81 (232)
|+||||||+||||++++++|+++|++|++++|+++......++.+.. ... ++.++++|++|.+++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999876421111222111 112 688999999999999999885 69
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCcc-----EEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIK-----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
+|||+||.... .+.++++..+++|+.++.++++++.+. +.+ +||++||... |+... . +.+|+....+
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~v-yg~~~----~-~~~E~~~~~~ 181 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEM-FGSTP----P-PQSETTPFHP 181 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGG-GTTSC----S-SBCTTSCCCC
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHH-hCCCC----C-CCCCCCCCCC
Confidence 99999986432 223457788999999999999999886 343 9999999854 44322 1 3444433222
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeee
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIM 229 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~ 229 (232)
...|+.+|.++|.+++.++.+++++++++||+.++||...... .....++.+...+. .++++.+.++|
T Consensus 182 ------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 255 (381)
T 1n7h_A 182 ------RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 255 (381)
T ss_dssp ------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence 3569999999999999998888999999999999999864322 11233444555554 35788899999
Q ss_pred ec
Q 026852 230 IY 231 (232)
Q Consensus 230 ~~ 231 (232)
+|
T Consensus 256 v~ 257 (381)
T 1n7h_A 256 GF 257 (381)
T ss_dssp EE
T ss_pred EE
Confidence 87
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-28 Score=199.48 Aligned_cols=173 Identities=15% Similarity=0.065 Sum_probs=136.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
++++|++|||||+||||++++++|+++|++|++++|++++.. +..+++... ..++.++++|++|.+++.++++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ-KVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999875432 122222211 2368999999999999888876
Q ss_pred --CCCEEEEc-ccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 --GCDGVFHT-ASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 --~~d~vi~~-Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++||| ||... ..+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 173 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM---------- 173 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT----------
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC----------
Confidence 78999999 56422 23345678899999999999999998863 2379999999976543221
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhc-----CCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~-----~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+. ++++++++||++.|++.
T Consensus 174 ------------~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~ 217 (286)
T 1xu9_A 174 ------------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA 217 (286)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH
Confidence 2559999999999998887764 89999999999999863
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=215.42 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=155.9
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcchHHHhhc--CC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD--GC 80 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~ 80 (232)
..+++|+||||||+|+||++++++|+++|++|++++|+..... ...+.+.. ...+++++++|++|.+++.++++ ++
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTY-DSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT-HHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchH-HHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 3467789999999999999999999999999999999875432 11111110 12467899999999999999998 89
Q ss_pred CEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 81 DGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 81 d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|+|||+||.... ...+.+.+.+++|+.++.++++++.+. +.++||++||... ++.........+.+|+....+
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~v-yg~~~~~~~~~~~~E~~~~~p---- 159 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATV-YGDATRFPNMIPIPEECPLGP---- 159 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGG-GCCGGGSTTCCSBCTTSCCCC----
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHH-hCCCccccccCCccccCCCCC----
Confidence 999999986432 112345678999999999999999887 6789999999854 432211011122334332222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHh--cCCcEEEEccCceeCCCCCCC--------CcchHHHHHHHHcC--C---CCC---
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKE--NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLING--N---IYS--- 221 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~--~~i~~~~v~pg~v~g~~~~~~--------~~~~~~~~~~~~~~--~---~~~--- 221 (232)
...|+.||.++|.+++.++.+ .+++++++||++++||..... .......+.+...+ . +++
T Consensus 160 --~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (699)
T 1z45_A 160 --TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDY 237 (699)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC----
T ss_pred --CChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcc
Confidence 356999999999999998877 799999999999999864211 12334455555443 2 455
Q ss_pred ---Cccceeeeec
Q 026852 222 ---AAIQDRIMIY 231 (232)
Q Consensus 222 ---~~~~~~~~~~ 231 (232)
++.+.|+|+|
T Consensus 238 ~~~~g~~~~~~i~ 250 (699)
T 1z45_A 238 DSRDGTPIRDYIH 250 (699)
T ss_dssp --CCSSCEECEEE
T ss_pred cCCCCCeeEeeEE
Confidence 6889999987
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=206.44 Aligned_cols=215 Identities=18% Similarity=0.168 Sum_probs=152.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhh-hhh---------cCCCCceEEEEcCCCCcchHH
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHL-REL---------DGATERLHLFKANLLEEGSFD 74 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~-~~~---------~~~~~~~~~~~~D~~~~~~~~ 74 (232)
..+|+||||||+|+||++++++|++.|++|++++|++..... ..+ +.+ .....++.++++|++|.+++.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 466899999999999999999999999999999999863211 111 111 011357999999999999888
Q ss_pred HhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCC-CCCCCccccccCCCC
Q 026852 75 SAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNE-TPMTPDVVIDETWFS 153 (232)
Q Consensus 75 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~-~~~~~~~~~~e~~~~ 153 (232)
.+.++|+|||+||.... ..++...+++|+.++.++++++.+ +.++||++||... +.. .....+.+++|+.+.
T Consensus 147 -~~~~~d~Vih~A~~~~~--~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~--G~~~~~~~~~~~~~E~~~~ 219 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDH--FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV--GTYFDIDTEDVTFSEADVY 219 (427)
T ss_dssp -CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG--GSEECSSCSCCEECTTCSC
T ss_pred -CcCCCCEEEECCcccCC--CCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh--CCCccCCCCCccccccccc
Confidence 78899999999997542 356788999999999999999988 5689999999866 221 111224456666542
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC------cchHHHHHHHHcCC--CCCCccc
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL------NFGAEVILNLINGN--IYSAAIQ 225 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~ 225 (232)
.+. .....|+.||.++|.+++.+++ .|++++++|||+|+||...... .....++.....+. ..+.+.+
T Consensus 220 ~~~---~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (427)
T 4f6c_A 220 KGQ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM 295 (427)
T ss_dssp SSC---CCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTC
T ss_pred cCC---CCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccc
Confidence 211 1346699999999999988754 7999999999999999865532 12455666666665 2233677
Q ss_pred eeeeec
Q 026852 226 DRIMIY 231 (232)
Q Consensus 226 ~~~~~~ 231 (232)
.++|+|
T Consensus 296 ~~~~v~ 301 (427)
T 4f6c_A 296 PVDFSF 301 (427)
T ss_dssp EECCEE
T ss_pred eEEEee
Confidence 777775
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-28 Score=194.24 Aligned_cols=177 Identities=19% Similarity=0.129 Sum_probs=140.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
..+|++|||||+||||++++++|+++|++|++++|++++... ..+.+|++|.++++++++
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~d~~d~~~v~~~~~~~~~~~g 86 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------------HSFTIKDSGEEEIKSVIEKINSKSI 86 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-------------EEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-------------cceEEEeCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999999999999999864321 357899999999988876
Q ss_pred CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 ~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|+||||||.. ...+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 154 (251)
T 3orf_A 87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG------------ 154 (251)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------------
T ss_pred CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC------------
Confidence 459999999953 2234567789999999999999999998752 369999999977654332
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCCC-----------CCcchHHHHHHHH
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQP-----------ILNFGAEVILNLI 215 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~~-----------~~~~~~~~~~~~~ 215 (232)
...|+.||++.+.+++.++.+ +||++++|+||+|.|++... ..+.+++.+..++
T Consensus 155 ----------~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l~ 224 (251)
T 3orf_A 155 ----------MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEWS 224 (251)
T ss_dssp ----------BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHHH
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHHh
Confidence 255999999999999999988 48999999999999986421 1124455666666
Q ss_pred cC
Q 026852 216 NG 217 (232)
Q Consensus 216 ~~ 217 (232)
..
T Consensus 225 ~~ 226 (251)
T 3orf_A 225 TN 226 (251)
T ss_dssp HC
T ss_pred cC
Confidence 55
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=195.03 Aligned_cols=174 Identities=20% Similarity=0.213 Sum_probs=135.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|++|||||+||||++++++|+++|++|++++|++++.. +..+++.. ...++.++++|++|.+++.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE-ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHH-HHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999999875332 22222221 12568899999999999988876
Q ss_pred --CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc--cEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI--KRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~--~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|+||||||... +.+.+.++..+++|+.++.++++.+.+.+ +. ++||++||..+....+
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~-------- 180 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP-------- 180 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS--------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCC--------
Confidence 7899999998532 23456788999999999888877776642 32 7999999986542111
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~ 200 (232)
. .....|+.+|.+.+.+++.++.+ .++++++|+||+|.|++.
T Consensus 181 -------~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~ 227 (279)
T 1xg5_A 181 -------L-----SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA 227 (279)
T ss_dssp -------C-----GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH
T ss_pred -------C-----CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh
Confidence 0 11255999999999998888775 479999999999999873
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=186.82 Aligned_cols=158 Identities=18% Similarity=0.236 Sum_probs=129.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi~~A 87 (232)
|+||||||+|+||++++++|+++|++|++++|++++... ..+++++++|++| .+++.++++++|+|||+|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 379999999999999999999999999999999754321 1578999999999 999999999999999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
|... .+.+++|+.++.++++++.+. +.++||++||..+..+. ...| .+......|+.
T Consensus 72 g~~~-------~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~--------~~~e-------~~~~~~~~Y~~ 128 (219)
T 3dqp_A 72 GSGG-------KSLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE--------KWIG-------AGFDALKDYYI 128 (219)
T ss_dssp CCTT-------SSCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGG--------GCCS-------HHHHHTHHHHH
T ss_pred cCCC-------CCcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCC--------cccc-------cccccccHHHH
Confidence 8643 236788999999999999887 77899999998554321 1111 01122366999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
+|.++|.+++ +..+++++++|||+++|+...
T Consensus 129 sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~ 159 (219)
T 3dqp_A 129 AKHFADLYLT---KETNLDYTIIQPGALTEEEAT 159 (219)
T ss_dssp HHHHHHHHHH---HSCCCEEEEEEECSEECSCCC
T ss_pred HHHHHHHHHH---hccCCcEEEEeCceEecCCCC
Confidence 9999999885 468999999999999998653
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=187.77 Aligned_cols=159 Identities=24% Similarity=0.226 Sum_probs=132.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------CCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCD 81 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d 81 (232)
+|++|||||+||||++++++|+++|++|++++|+++ . .++.++++|++|.+++.++++ ++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence 479999999999999999999999999999999875 1 134789999999999999887 789
Q ss_pred EEEEccccccc-----CCCC----chhhhhHHHHHHHHHHHHHHHhhCC------c---cEEEEecccceeccCCCCCCC
Q 026852 82 GVFHTASPVIF-----LSDN----PQADIVDPAVMGTLNVLRSCAKVHS------I---KRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 82 ~vi~~Ag~~~~-----~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~------~---~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|||||.... .+.+ .+++.+++|+.++.++++++.+.+. . ++||++||..+..+.+.
T Consensus 69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---- 144 (242)
T 1uay_A 69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---- 144 (242)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT----
T ss_pred EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC----
Confidence 99999985321 2223 7789999999999999999988632 1 39999999977654322
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+.+.++.+ +|+++++++||+++||+..
T Consensus 145 ------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 187 (242)
T 1uay_A 145 ------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ 187 (242)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH
T ss_pred ------------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh
Confidence 255999999999999888877 4999999999999998754
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=187.18 Aligned_cols=161 Identities=18% Similarity=0.152 Sum_probs=130.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~ 85 (232)
|++|||||+||||++++++|+++ +|++++|++++.. ...+++. . +++++|++|++++.++++ ++|+|||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~-~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~vi~ 72 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALA-ELAREVG----A-RALPADLADELEAKALLEEAGPLDLLVH 72 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHH-HHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHH-HHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence 57999999999999999999998 9999999864322 1222221 1 788999999999999998 8999999
Q ss_pred cccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 86 TASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 86 ~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
|||... +.+.+++++.+++|+.++.++++++.+. +.++||++||..+..+.+.
T Consensus 73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~~~~~--------------------- 130 (207)
T 2yut_A 73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYVQVPG--------------------- 130 (207)
T ss_dssp CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHHSSTT---------------------
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC---------------------
Confidence 998532 2456788999999999999999998554 5689999999976644322
Q ss_pred cchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.+ +|+++++++||+++|++.
T Consensus 131 -~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~ 172 (207)
T 2yut_A 131 -FAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW 172 (207)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG
T ss_pred -cchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc
Confidence 255999999999999998887 699999999999999863
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=186.17 Aligned_cols=158 Identities=20% Similarity=0.125 Sum_probs=130.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|++|++|||||+||||++++++|+++|+ +|++++|++++..... ..++.++++|++|.+++.++++++|+|
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~v 88 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG 88 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence 4678999999999999999999999999 9999999986543211 135789999999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|||||.... ...++..+++|+.++.++++++.+. +.++||++||..++. .+ ..
T Consensus 89 i~~ag~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~-~~-----------------------~~ 141 (242)
T 2bka_A 89 FCCLGTTRG--KAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADK-SS-----------------------NF 141 (242)
T ss_dssp EECCCCCHH--HHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCT-TC-----------------------SS
T ss_pred EECCCcccc--cCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCC-CC-----------------------cc
Confidence 999986432 1245788999999999999999886 678999999986542 11 14
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-cEEEEccCceeCCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGI-DLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i-~~~~v~pg~v~g~~~~ 201 (232)
.|+.+|...+.+++ ..++ +++++|||+++||+..
T Consensus 142 ~Y~~sK~~~e~~~~----~~~~~~~~~vrpg~v~~~~~~ 176 (242)
T 2bka_A 142 LYLQVKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQE 176 (242)
T ss_dssp HHHHHHHHHHHHHH----TTCCSEEEEEECCEEECTTGG
T ss_pred hHHHHHHHHHHHHH----hcCCCCeEEEcCceecCCCCC
Confidence 49999999998874 4578 6999999999999753
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=191.41 Aligned_cols=169 Identities=23% Similarity=0.195 Sum_probs=116.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch---HHHh---hc
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSA---VD 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~---~~ 78 (232)
++++|++|||||+||||++++++|++ |++|++++|+++.. +.+.. ..++.++++|+++.++ +.+. +.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHL-----AALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHH-----HHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHH-----HHHHh-hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 36789999999999999999999988 99999999986432 22222 3468899999987743 2222 23
Q ss_pred CCCEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
++|++|||||.... .+.+.+++.+++|+.++.++++++.+.+ ..++||++||..+..+.+.
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 142 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPG------------ 142 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCC------------
Confidence 68999999995422 3456678999999999999999988753 2379999999977654332
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+.+.+++.++.+ +||++++|+||++.|++...
T Consensus 143 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 186 (245)
T 3e9n_A 143 ----------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG 186 (245)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh
Confidence 255999999999999999887 58999999999999997543
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-27 Score=190.60 Aligned_cols=177 Identities=15% Similarity=0.144 Sum_probs=125.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC----CEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC----DGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----d~vi 84 (232)
|++|||||+||||++++++|+++|++|++++|++++... . +++|++|.++++++++++ |+||
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~~~~id~lv 67 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKCSKGMDGLV 67 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHhCCCCCEEE
Confidence 689999999999999999999999999999998764321 1 679999999999988654 9999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCChh-----
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV----- 156 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~----- 156 (232)
||||.... ...+++.+++|+.++.++++++.+.+ +.++||++||..+...............+.......
T Consensus 68 ~~Ag~~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (257)
T 1fjh_A 68 LCAGLGPQ--TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH 145 (257)
T ss_dssp ECCCCCTT--CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred ECCCCCCC--cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhc
Confidence 99996431 34589999999999999999998753 448999999997663211100000101111000000
Q ss_pred -hccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 157 -LCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 157 -~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
.+......|+.||.+.+.+++.++.+ +||++++|+||+|.|++..
T Consensus 146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 194 (257)
T 1fjh_A 146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ 194 (257)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccch
Confidence 00012356999999999999988877 5999999999999999754
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-27 Score=184.23 Aligned_cols=150 Identities=16% Similarity=0.123 Sum_probs=126.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC---CCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG---CDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~ 85 (232)
|++|||||+||||++++++|+ +|++|++++|+++ ++++|++|++++++++++ +|+|||
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~ 64 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQVGKVDAIVS 64 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence 379999999999999999999 9999999999863 467999999999998875 799999
Q ss_pred cccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 86 TASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 86 ~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
+||... ..+.+.+++.+++|+.++.++++++.+.+. .++||++||..+..+.+.
T Consensus 65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------------- 124 (202)
T 3d7l_A 65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ-------------------- 124 (202)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT--------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc--------------------
Confidence 998532 234466788899999999999999988742 379999999866533221
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCC
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPF 199 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~ 199 (232)
...|+.+|.+.+.+++.++.+. |+++++++||+++||+
T Consensus 125 --~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~ 164 (202)
T 3d7l_A 125 --GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW 164 (202)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred --cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence 2559999999999999988774 9999999999999985
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=192.15 Aligned_cols=191 Identities=15% Similarity=0.092 Sum_probs=117.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 85 (232)
+|+||||||+|+||++++++|+++|++|++++|+... .+ ++++|++|.+++.+++++ +|+|||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih 66 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH 66 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence 3789999999999999999999999999999987642 11 778999999999999885 899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+||.... .+.+++++.+++|+.++.++++++.+. +. ++|++||...+.+ . ..+.+|+....| ...
T Consensus 67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~-~-----~~~~~E~~~~~~------~~~ 132 (315)
T 2ydy_A 67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDG-T-----NPPYREEDIPAP------LNL 132 (315)
T ss_dssp CC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCS-S-----SCSBCTTSCCCC------CSH
T ss_pred CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCC-C-----CCCCCCCCCCCC------cCH
Confidence 9996432 335677889999999999999999987 54 9999999965433 1 233445443322 356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHH-cCC-CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI-NGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 231 (232)
|+.+|..+|.+++.+ +++++++||+.|+||...........++.... .+. ....+.+.++|+|
T Consensus 133 Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 197 (315)
T 2ydy_A 133 YGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTH 197 (315)
T ss_dssp HHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEE
T ss_pred HHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEE
Confidence 999999999998654 57889999999999986522122222333444 444 2223567777775
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=182.44 Aligned_cols=165 Identities=19% Similarity=0.202 Sum_probs=128.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+++|+||||||+|+||++++++|+++ |++|++++|++++ .+.+ ..+++++++|++|.+++.++++++|+|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~-----~~~~---~~~~~~~~~D~~d~~~~~~~~~~~d~v 73 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----KEKI---GGEADVFIGDITDADSINPAFQGIDAL 73 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH-----HHHT---TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc-----hhhc---CCCeeEEEecCCCHHHHHHHHcCCCEE
Confidence 45689999999999999999999999 8999999998632 2222 245778999999999999999999999
Q ss_pred EEcccccccC-----------C---CCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCcccccc
Q 026852 84 FHTASPVIFL-----------S---DNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 84 i~~Ag~~~~~-----------~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
||+||..... . .+.+...+++|+.++.++++++.+. +.++||++||..+..+..
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~----------- 141 (253)
T 1xq6_A 74 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDH----------- 141 (253)
T ss_dssp EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTC-----------
T ss_pred EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCCCC-----------
Confidence 9999854211 1 1223456899999999999999887 678999999986431110
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
+...|.. ..|+.+|...|.+++ +++++++++|||+++|+..
T Consensus 142 ---~~~~~~~---~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~ 182 (253)
T 1xq6_A 142 ---PLNKLGN---GNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEG 182 (253)
T ss_dssp ---GGGGGGG---CCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCS
T ss_pred ---ccccccc---hhHHHHHHHHHHHHH----hCCCceEEEecceeecCCc
Confidence 0111211 238899999998774 4799999999999999864
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=199.45 Aligned_cols=172 Identities=18% Similarity=0.188 Sum_probs=136.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.+++|++|||||+||||++++++|+++|++|++++|+... +.+.+... ...+.++++|++|.++++++++
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~---~~l~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA---EDLKRVAD-KVGGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH---HHHHHHHH-HHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH---HHHHHHHH-HcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999987532 11111111 1135789999999999988875
Q ss_pred -C-CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -G-CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~-~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
+ +|+||||||.. ...+.+.++.++++|+.+++++++++.+.+ +.++||++||..+..+...
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g--------- 356 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG--------- 356 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT---------
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC---------
Confidence 3 89999999954 235677889999999999999999998864 4579999999988776543
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.+|.+.+.+++.++.+ +||++++|+||+|.|++...
T Consensus 357 -------------~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 400 (454)
T 3u0b_A 357 -------------QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA 400 (454)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----
T ss_pred -------------CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh
Confidence 245999999999998888876 49999999999999998653
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-26 Score=179.98 Aligned_cols=165 Identities=16% Similarity=0.119 Sum_probs=127.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|++++ ...+. ..+++++++|++|.++ ++++++|+|||+||
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~--~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK-----AADRL--GATVATLVKEPLVLTE--ADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHT--CTTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc-----ccccc--CCCceEEecccccccH--hhcccCCEEEECCc
Confidence 369999999999999999999999999999998743 22222 2468999999999988 78899999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.... . ...+.|+.++.++++++.+. + +++|++||.+++++..... ....++...+. +...|+.+
T Consensus 72 ~~~~--~----~~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~--~~~~~~~~~~~------~~~~y~~s 135 (224)
T 3h2s_A 72 VPWG--S----GRGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADH--PMILDFPESAA------SQPWYDGA 135 (224)
T ss_dssp CCTT--S----SCTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSS--CGGGGCCGGGG------GSTTHHHH
T ss_pred cCCC--c----chhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCc--cccccCCCCCc------cchhhHHH
Confidence 7521 1 23578999999999999887 6 9999999987776544311 11222222221 13569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
|...|.+ +.+.++.+++++++|||+++||.
T Consensus 136 K~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~ 165 (224)
T 3h2s_A 136 LYQYYEY-QFLQMNANVNWIGISPSEAFPSG 165 (224)
T ss_dssp HHHHHHH-HHHTTCTTSCEEEEEECSBCCCC
T ss_pred HHHHHHH-HHHHhcCCCcEEEEcCccccCCC
Confidence 9999954 45555679999999999999984
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-27 Score=187.47 Aligned_cols=172 Identities=19% Similarity=0.201 Sum_probs=130.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----CCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi 84 (232)
|+||||||+||||++++++|+++|++|++++|++++... .+++|++|.+++.++++ ++|+||
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~~~~~d~vi 67 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRCGGVLDGLV 67 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHcCCCccEEE
Confidence 589999999999999999999999999999998764321 15689999999998886 899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC-CCChhh---
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW-FSNPVL--- 157 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~-~~~~~~--- 157 (232)
||||.... ..+++..+++|+.++.++++++.+.+ +.++||++||..++.+... ..+..+.. ......
T Consensus 68 ~~Ag~~~~--~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 141 (255)
T 2dkn_A 68 CCAGVGVT--AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA----ELPMVEAMLAGDEARAIE 141 (255)
T ss_dssp ECCCCCTT--SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG----GCHHHHHHHHTCHHHHHH
T ss_pred ECCCCCCc--chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc----ccchhhhhcccchhhhhh
Confidence 99996531 35688999999999999999988762 4589999999976643211 00000000 000000
Q ss_pred ----ccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 158 ----CKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 158 ----~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
.......|+.||.+.+.+++.++.+ +|++++++|||+++||+.
T Consensus 142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~ 191 (255)
T 2dkn_A 142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL 191 (255)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence 0012356999999999999988877 699999999999999864
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=188.28 Aligned_cols=178 Identities=13% Similarity=0.068 Sum_probs=131.4
Q ss_pred CCCCCCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCC-----------CCcchhhhhhhcCCC--CceEEEEcC
Q 026852 2 MSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDP-----------NSPKTEHLRELDGAT--ERLHLFKAN 66 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~--~~~~~~~~D 66 (232)
|...+++|++|||||+ ||||++++++|+++|++|++++|++ ++.. ..+++.... .....+.+|
T Consensus 2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 79 (297)
T 1d7o_A 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFD--QSRVLPDGSLMEIKKVYPLD 79 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTT--GGGBCTTSSBCCEEEEEEEC
T ss_pred CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhh--hhhhhccccccccccccccc
Confidence 4556889999999999 9999999999999999999998652 1111 112221100 112344443
Q ss_pred --------CC----C--------cchHHHhhc-------CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHH
Q 026852 67 --------LL----E--------EGSFDSAVD-------GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNV 112 (232)
Q Consensus 67 --------~~----~--------~~~~~~~~~-------~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l 112 (232)
++ | .++++++++ ++|++|||||.. .+.+.+.++..+++|+.+++++
T Consensus 80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 159 (297)
T 1d7o_A 80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL 159 (297)
T ss_dssp TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence 22 2 566766654 679999999842 2345677899999999999999
Q ss_pred HHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcE
Q 026852 113 LRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDL 187 (232)
Q Consensus 113 ~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~ 187 (232)
++++.+.+. .++||++||..+..+.+.. ...|+.||.+.+.+++.++.+ +||++
T Consensus 160 ~~~~~~~m~~~g~iv~isS~~~~~~~~~~---------------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~v 218 (297)
T 1d7o_A 160 LSHFLPIMNPGGASISLTYIASERIIPGY---------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRV 218 (297)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSCCTTC---------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHhccCceEEEEeccccccCCCCc---------------------chHHHHHHHHHHHHHHHHHHHhCcccCcEE
Confidence 999999753 3799999998766443220 024999999999999888876 59999
Q ss_pred EEEccCceeCCCCCC
Q 026852 188 VAIHPGTVIGPFFQP 202 (232)
Q Consensus 188 ~~v~pg~v~g~~~~~ 202 (232)
++|+||+|+||+...
T Consensus 219 n~v~PG~v~T~~~~~ 233 (297)
T 1d7o_A 219 NTISAGPLGSRAAKA 233 (297)
T ss_dssp EEEEECCCBCCCSSC
T ss_pred EEEeccccccchhhh
Confidence 999999999998654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=189.98 Aligned_cols=184 Identities=14% Similarity=0.008 Sum_probs=140.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~ 86 (232)
|+||||||+|+||++++++|+ +|++|++++|++. ++++|++|.+++.+++++ +|+|||+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~~d~vih~ 61 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLRPDVIVNA 61 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence 379999999999999999999 8999999999762 246899999999999986 9999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||.... ....++++.+++|+.++.++++++.+. +. |+|++||... |+... ..+.+|+....| ...|
T Consensus 62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v-y~~~~----~~~~~E~~~~~p------~~~Y 128 (299)
T 1n2s_A 62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYV-FPGTG----DIPWQETDATSP------LNVY 128 (299)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGG-SCCCT----TCCBCTTSCCCC------SSHH
T ss_pred cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccE-EeCCC----CCCCCCCCCCCC------ccHH
Confidence 986432 235677889999999999999999886 54 8999999954 43322 223445443332 3569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
+.+|.++|.+++.++ .+++++||++++||... .....++.....+. ....+.+.++|+|
T Consensus 129 ~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 188 (299)
T 1n2s_A 129 GKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTG 188 (299)
T ss_dssp HHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEE
T ss_pred HHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCee
Confidence 999999999987653 48999999999999754 23444555555665 2112347788876
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=188.18 Aligned_cols=181 Identities=17% Similarity=0.120 Sum_probs=139.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||+|+||++++++|+++|++|++++|. ++|++|.+++.++++ ++|+|||+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi~~ 63 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIIIHC 63 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEEEC
Confidence 389999999999999999999999999999982 279999999999998 69999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||.... ...+++...+++|+.++.++++++.+. +. |+|++||... |+... ..+++|+....| ...|
T Consensus 64 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~v-y~~~~----~~~~~E~~~~~p------~~~Y 130 (287)
T 3sc6_A 64 AAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYV-FQGDR----PEGYDEFHNPAP------INIY 130 (287)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGG-SCCCC----SSCBCTTSCCCC------CSHH
T ss_pred CcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhh-cCCCC----CCCCCCCCCCCC------CCHH
Confidence 986532 334678899999999999999999887 54 7999999954 43322 344555554333 3569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
+.+|.++|.+++.+ ..+++++||++++||... .....++.....+. ....+.+.++|+|
T Consensus 131 ~~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (287)
T 3sc6_A 131 GASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTY 190 (287)
T ss_dssp HHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEE
T ss_pred HHHHHHHHHHHHHh----CCCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceE
Confidence 99999999998765 347899999999999743 23444555555555 2112347888876
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-26 Score=200.34 Aligned_cols=214 Identities=17% Similarity=0.173 Sum_probs=154.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-----hhhhhh------cCCCCceEEEEcCCCCcchHHH
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-----EHLREL------DGATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~------~~~~~~~~~~~~D~~~~~~~~~ 75 (232)
..|+||||||+|+||++++++|++.|++|++++|++..... +.+... .....+++++++|+++++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 34799999999999999999999999999999999863211 111110 111468999999999988888
Q ss_pred hhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCC-CCCCCccccccCCCCC
Q 026852 76 AVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNE-TPMTPDVVIDETWFSN 154 (232)
Q Consensus 76 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~-~~~~~~~~~~e~~~~~ 154 (232)
+..++|+|||+||... ...++...+++|+.++.++++++.+ ..+++||+||... +.. .....+.+++|+....
T Consensus 228 ~~~~~D~Vih~Aa~~~--~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v--G~~~~~~~~~~~~~E~~~~~ 301 (508)
T 4f6l_B 228 LPENMDTIIHAGARTD--HFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV--GTYFDIDTEDVTFSEADVYK 301 (508)
T ss_dssp CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT--TSEECTTCSCCEECTTCSCS
T ss_pred CccCCCEEEECCceec--CCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh--ccCCccCCcCcccccccccc
Confidence 7789999999998653 2345678899999999999999988 4689999999865 221 1112234555655422
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC------cchHHHHHHHHcCC--CCCCccce
Q 026852 155 PVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL------NFGAEVILNLINGN--IYSAAIQD 226 (232)
Q Consensus 155 ~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~ 226 (232)
+. .....|+.||..+|.+++.+++ .|++++++|||+|+||...... .....++...+... ..+.+.+.
T Consensus 302 ~~---~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~ 377 (508)
T 4f6l_B 302 GQ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP 377 (508)
T ss_dssp SB---CCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred cc---cCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence 11 1346699999999999988754 7999999999999999865431 12456666666666 33457888
Q ss_pred eeeec
Q 026852 227 RIMIY 231 (232)
Q Consensus 227 ~~~~~ 231 (232)
++|+|
T Consensus 378 ~~~v~ 382 (508)
T 4f6l_B 378 VDFSF 382 (508)
T ss_dssp EECEE
T ss_pred EEEEc
Confidence 88886
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=187.05 Aligned_cols=159 Identities=15% Similarity=0.085 Sum_probs=122.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||+||||++++++|+++|++|++++|++++... +.++.....++..+ |.++++++++ ++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE--LEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH--HHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence 689999999999999999999999999999998765432 11122112334443 5555555543 789
Q ss_pred EEEEccccc-c-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASPV-I-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~~-~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|||||.. . +.+.+.+++.+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 141 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE------------- 141 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT-------------
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC-------------
Confidence 999999864 2 24556788999999999999999998753 4579999999977654322
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCcee
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI 196 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~ 196 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.
T Consensus 142 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 179 (254)
T 1zmt_A 142 ---------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 179 (254)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBC
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 245999999999999998887 48999999999993
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-26 Score=189.08 Aligned_cols=170 Identities=22% Similarity=0.158 Sum_probs=131.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC---------CCcchhhhhhhcCCCCceEEEEcCCCCcchHHH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---------NSPKTEHLRELDGATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (232)
.+++|++|||||+||||++++++|+++|++|++.+|+. ++.. +..+++...... ..+|+++.+++.+
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~-~~~~~l~~~~~~---~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAAD-KVVEEIRRRGGK---AVANYDSVEAGEK 81 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHH-HHHHHHHHTTCE---EEEECCCGGGHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHH-HHHHHHHhhCCe---EEEeCCCHHHHHH
Confidence 47889999999999999999999999999999987642 1111 222333222222 3489999988777
Q ss_pred hhc-------CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCC
Q 026852 76 AVD-------GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 76 ~~~-------~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~ 140 (232)
+++ ++|+||||||... ..+.+.++..+++|+.|++++++++.+.+ +.++||++||..+.++.+.
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~- 160 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG- 160 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC-
Confidence 654 6899999999532 24567789999999999999999997753 4579999999877765332
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||.+.+.+++.++.+ +||++++|+||.+ |++..
T Consensus 161 ---------------------~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~ 202 (319)
T 1gz6_A 161 ---------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE 202 (319)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG
T ss_pred ---------------------CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc
Confidence 245999999999999998887 4999999999998 76643
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=190.30 Aligned_cols=176 Identities=16% Similarity=0.083 Sum_probs=129.0
Q ss_pred CCCCCCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCC-----------CCcchhhhhhhcCCC--CceEEEEc
Q 026852 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDP-----------NSPKTEHLRELDGAT--ERLHLFKA 65 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~--~~~~~~~~ 65 (232)
||+..+++|++||||| +||||++++++|+++|++|++++|++ .+. +..+++.... ....++.+
T Consensus 2 M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 79 (315)
T 2o2s_A 2 AFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRL--DEDRKLPDGSLIEFAGVYPL 79 (315)
T ss_dssp --CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTT--HHHHBCTTSCBCCCSCEEEC
T ss_pred CCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhh--hhhhhhhccccccccccccc
Confidence 5566689999999999 89999999999999999999998753 111 1112221110 01244444
Q ss_pred CC------------C--------CcchHHHhhc-------CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHH
Q 026852 66 NL------------L--------EEGSFDSAVD-------GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLN 111 (232)
Q Consensus 66 D~------------~--------~~~~~~~~~~-------~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~ 111 (232)
|+ + |.++++++++ ++|++|||||.. .+.+.+.|+..+++|+.++++
T Consensus 80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 159 (315)
T 2o2s_A 80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS 159 (315)
T ss_dssp CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 43 3 2557776654 679999999843 224567788999999999999
Q ss_pred HHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCc
Q 026852 112 VLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGID 186 (232)
Q Consensus 112 l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~ 186 (232)
+++++.+.+. .++||++||..+..+.+.. ...|+.||++.+.+.+.++.+ +||+
T Consensus 160 l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~---------------------~~~Y~asKaal~~l~~~la~el~~~~gIr 218 (315)
T 2o2s_A 160 LLQHFGPIMNEGGSAVTLSYLAAERVVPGY---------------------GGGMSSAKAALESDTRTLAWEAGQKYGVR 218 (315)
T ss_dssp HHHHHSTTEEEEEEEEEEEEGGGTSCCTTC---------------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHhcCCEEEEEecccccccCCCc---------------------cHHHHHHHHHHHHHHHHHHHHhCcccCeE
Confidence 9999998752 3799999998766443220 024999999999998888776 5899
Q ss_pred EEEEccCceeCCC
Q 026852 187 LVAIHPGTVIGPF 199 (232)
Q Consensus 187 ~~~v~pg~v~g~~ 199 (232)
+++|+||+|.|++
T Consensus 219 vn~v~PG~v~T~~ 231 (315)
T 2o2s_A 219 VNAISAGPLKSRA 231 (315)
T ss_dssp EEEEEECCCCCHH
T ss_pred EEEEecccccchh
Confidence 9999999999985
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=190.65 Aligned_cols=180 Identities=14% Similarity=0.054 Sum_probs=113.9
Q ss_pred CCCCCCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCC-----------CCcch----------hhhhhhcCCC
Q 026852 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDP-----------NSPKT----------EHLRELDGAT 57 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~-----------~~~~~----------~~~~~~~~~~ 57 (232)
||.+.+++|++||||| ++|||+++++.|+++|++|++++|++ ++... +..+++....
T Consensus 2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 2ptg_A 2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP 81 (319)
T ss_dssp CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence 6676789999999999 89999999999999999999998752 11110 0111111111
Q ss_pred C---ceEEEEcCC------------CC--------cchHHHhhc-------CCCEEEEccccc-------ccCCCCchhh
Q 026852 58 E---RLHLFKANL------------LE--------EGSFDSAVD-------GCDGVFHTASPV-------IFLSDNPQAD 100 (232)
Q Consensus 58 ~---~~~~~~~D~------------~~--------~~~~~~~~~-------~~d~vi~~Ag~~-------~~~~~~~~~~ 100 (232)
. ...++.+|+ +| .+++.++++ ++|++|||||.. .+.+.+.|+.
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~ 161 (319)
T 2ptg_A 82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA 161 (319)
T ss_dssp ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence 0 124444443 22 446666654 679999999843 2245667889
Q ss_pred hhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHH
Q 026852 101 IVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179 (232)
Q Consensus 101 ~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~ 179 (232)
.+++|+.+++++++++.+.+. .++||++||..+..+.+. . ...|+.||++.+.+++.+
T Consensus 162 ~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~--------------~-------~~~Y~asKaal~~l~~~l 220 (319)
T 2ptg_A 162 AVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG--------------Y-------GGGMSSAKAALESDCRTL 220 (319)
T ss_dssp HHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------THHHHHHH
T ss_pred HHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc--------------c-------chhhHHHHHHHHHHHHHH
Confidence 999999999999999999753 379999999977644322 0 023788888888777777
Q ss_pred HHh----cCCcEEEEccCceeCCCCC
Q 026852 180 AKE----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 180 ~~~----~~i~~~~v~pg~v~g~~~~ 201 (232)
+.+ +||+|++|+||+|.|++..
T Consensus 221 a~el~~~~gIrvn~v~PG~v~T~~~~ 246 (319)
T 2ptg_A 221 AFEAGRARAVRVNCISAGPLKSRAAS 246 (319)
T ss_dssp HHHHHHHHCCEEEEEEECCCC-----
T ss_pred HHHhccccCeeEEEEeeCCccChhhh
Confidence 665 5899999999999998753
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-26 Score=177.74 Aligned_cols=161 Identities=14% Similarity=0.191 Sum_probs=118.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|++++ ...+. .+++++++|++|.++ ++++++|+|||+||
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK-----ITQTH---KDINILQKDIFDLTL--SDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH-----HHHHC---SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh-----hhhcc---CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence 479999999999999999999999999999998743 22222 468899999999988 78899999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.... ..+.|+.++.++++++.+. +.+++|++||.+++++.... .+..++.... ....|+.+
T Consensus 71 ~~~~--------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~----~~~~~~~~~~------~~~~y~~~ 131 (221)
T 3ew7_A 71 ISPD--------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDG----NTLLESKGLR------EAPYYPTA 131 (221)
T ss_dssp SSTT--------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC-----------------------------CCCSCCH
T ss_pred CCcc--------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCC----ccccccCCCC------CHHHHHHH
Confidence 6321 2456999999999999887 68999999999777654431 1112221111 12448899
Q ss_pred HHHHHHHHHHHHH-hcCCcEEEEccCceeCCC
Q 026852 169 KTLAEEAAWKFAK-ENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 169 K~~~~~~~~~~~~-~~~i~~~~v~pg~v~g~~ 199 (232)
|...+.+ ..+.. +.+++++++|||+++||.
T Consensus 132 k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~ 162 (221)
T 3ew7_A 132 RAQAKQL-EHLKSHQAEFSWTYISPSAMFEPG 162 (221)
T ss_dssp HHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC
T ss_pred HHHHHHH-HHHHhhccCccEEEEeCcceecCC
Confidence 9999987 33443 679999999999999983
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=184.91 Aligned_cols=161 Identities=21% Similarity=0.149 Sum_probs=123.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEE-E--cCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-V--RDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|++|||||+||||++++++|+++|++|+++ + |++++.. +..+++ . .. |+.|.++++++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~-~~~~~~--~--~~-----~~~~~~~v~~~~~~~~~~~ 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ-RFESEN--P--GT-----IALAEQKPERLVDATLQHG 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHS--T--TE-----EECCCCCGGGHHHHHGGGS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHH-HHHHHh--C--CC-----cccCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999999 6 8864322 222222 1 12 2225555544443
Q ss_pred -CCCEEEEcccccc--------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 -GCDGVFHTASPVI--------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 -~~d~vi~~Ag~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.+.++..+++|+.++.++++++.+.+ +.++||++||..+..+.+.
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------- 143 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY------- 143 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-------
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC-------
Confidence 6799999998532 23456788999999999999999998753 4589999999977654322
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+++.++.+ +||++++|+||+|.|++.
T Consensus 144 ---------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 144 ---------------NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY 185 (244)
T ss_dssp ---------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 134999999999999998887 489999999999999986
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-26 Score=185.35 Aligned_cols=182 Identities=15% Similarity=0.058 Sum_probs=137.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
..++||||||+|+||++++++|+++|++|++++|+ ++|++|.+++.++++ ++|+||
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 34799999999999999999999999999999886 279999999999998 799999
Q ss_pred Eccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 85 HTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 85 ~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|+||.... ...+++++.+++|+.++.++++++.+. +. +||++||...+ +... ..+.+|+....+ ..
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~-~~~~----~~~~~E~~~~~~------~~ 135 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVF-DGEA----KEPITEFDEVNP------QS 135 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGS-CSCC----SSCBCTTSCCCC------CS
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeE-CCCC----CCCCCCCCCCCC------cc
Confidence 99986432 223567889999999999999999987 55 99999998544 3322 233445443322 25
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
.|+.+|.++|.+++.+ +.+++++||+.++|| .. .....++.....+. ....+.+.++|+|
T Consensus 136 ~Y~~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (292)
T 1vl0_A 136 AYGKTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTS 196 (292)
T ss_dssp HHHHHHHHHHHHHHHH----CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEE
T ss_pred HHHHHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCcc
Confidence 6999999999998765 347999999999999 22 23344445555555 2112346777765
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-26 Score=188.70 Aligned_cols=174 Identities=11% Similarity=0.109 Sum_probs=132.7
Q ss_pred CCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCC---------CCcch--hhhhhhcCCCCceEEEEcCCCCc--c
Q 026852 7 EEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDP---------NSPKT--EHLRELDGATERLHLFKANLLEE--G 71 (232)
Q Consensus 7 ~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~---------~~~~~--~~~~~~~~~~~~~~~~~~D~~~~--~ 71 (232)
++|++|||||++ |||++++++|+++|++|++++|++ ++... ............+.++++|+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 368999999986 999999999999999999777554 22211 11111111234578899999887 7
Q ss_pred ------------------hHHHhhc-------CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHHHHHHHhh
Q 026852 72 ------------------SFDSAVD-------GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNVLRSCAKV 119 (232)
Q Consensus 72 ------------------~~~~~~~-------~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 119 (232)
++.++++ ++|++|||||.. .+.+.+.++.++++|+.+++++++++.+.
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7777665 579999999842 22456778999999999999999999997
Q ss_pred CC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch-hHHHHHHHHHHHHHHHHHh----cCCcEEEEccC
Q 026852 120 HS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE-WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPG 193 (232)
Q Consensus 120 ~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg 193 (232)
+. .++||++||..+..+.+. .. .|+.||++...+.+.++.+ +||+|++|+||
T Consensus 161 m~~~g~Iv~isS~~~~~~~~~----------------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG 218 (329)
T 3lt0_A 161 MKPQSSIISLTYHASQKVVPG----------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG 218 (329)
T ss_dssp EEEEEEEEEEECGGGTSCCTT----------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred HhhCCeEEEEeCccccCCCCc----------------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecc
Confidence 53 379999999977654332 12 4899999988888887776 48999999999
Q ss_pred ceeCCCCCC
Q 026852 194 TVIGPFFQP 202 (232)
Q Consensus 194 ~v~g~~~~~ 202 (232)
+|.|++...
T Consensus 219 ~v~T~~~~~ 227 (329)
T 3lt0_A 219 PLKSRAATA 227 (329)
T ss_dssp CCCCHHHHT
T ss_pred eeechhHhh
Confidence 999987543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=183.82 Aligned_cols=200 Identities=12% Similarity=0.137 Sum_probs=146.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC-----CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC---
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG-----YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--- 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 79 (232)
+|+||||||+|+||++++++|+++| ++|++++|++.... . ...+++++++|++|.+++.+++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------H--EDNPINYVQCDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------C--CSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------c--ccCceEEEEeecCCHHHHHHHHhcCCC
Confidence 4789999999999999999999999 99999999876432 1 134688999999999999999998
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEE-------EecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVV-------LTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv-------~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+|||+||... .++...+++|+.++.++++++.+.. +.+++| ++||.. .|+... ....+.+|+.
T Consensus 73 ~d~vih~a~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~-vyg~~~--~~~~~~~E~~ 145 (364)
T 2v6g_A 73 VTHVFYVTWANR----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE-SYGKIE--SHDPPYTEDL 145 (364)
T ss_dssp CCEEEECCCCCC----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG-GTTTSC--CCCSSBCTTS
T ss_pred CCEEEECCCCCc----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh-hccccc--cCCCCCCccc
Confidence 999999998642 4577899999999999999998863 578887 788874 444321 0123445554
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhcC-CcEEEEccCceeCCCCCCCCcc-hHHHHHHHH---cCC---CCCCc
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG-IDLVAIHPGTVIGPFFQPILNF-GAEVILNLI---NGN---IYSAA 223 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~-i~~~~v~pg~v~g~~~~~~~~~-~~~~~~~~~---~~~---~~~~~ 223 (232)
...+. ...|. .+|.+++.++++++ ++++++||++|+||........ .+.++.+.+ .+. +++++
T Consensus 146 ~~~~~-----~~~y~----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 216 (364)
T 2v6g_A 146 PRLKY-----MNFYY----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCK 216 (364)
T ss_dssp CCCSS-----CCHHH----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred cCCcc-----chhhH----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCc
Confidence 33221 23362 36777777766677 9999999999999987643332 233234433 454 47778
Q ss_pred cceeeeec
Q 026852 224 IQDRIMIY 231 (232)
Q Consensus 224 ~~~~~~~~ 231 (232)
.+.|+|++
T Consensus 217 ~~~~~~~~ 224 (364)
T 2v6g_A 217 AAWDGYSD 224 (364)
T ss_dssp HHHHSCBC
T ss_pred ccccccCC
Confidence 77776664
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=168.75 Aligned_cols=152 Identities=20% Similarity=0.222 Sum_probs=121.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+|+||||+|+||++++++|+++|++|++++|++++... . ...+++++++|++|.+++.++++++|+|||+||
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----E--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----S--SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-----c--cCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 789999999999999999999999999999998753221 1 134688999999999999999999999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.... .. ..++|+.++.++++++.+. +.+++|++||...+ +.... .+. ....|+.+
T Consensus 77 ~~~~---~~---~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~-~~~~~-------------~~~----~~~~y~~~ 131 (206)
T 1hdo_A 77 TRND---LS---PTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLL-WDPTK-------------VPP----RLQAVTDD 131 (206)
T ss_dssp CTTC---CS---CCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGT-SCTTC-------------SCG----GGHHHHHH
T ss_pred CCCC---CC---ccchHHHHHHHHHHHHHHh-CCCeEEEEeeeeec-cCccc-------------ccc----cchhHHHH
Confidence 6432 11 2358999999999999887 67899999999543 22110 000 23569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCcee
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVI 196 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~ 196 (232)
|...|.+++ +.+++++++|||++.
T Consensus 132 K~~~e~~~~----~~~i~~~~lrp~~~~ 155 (206)
T 1hdo_A 132 HIRMHKVLR----ESGLKYVAVMPPHIG 155 (206)
T ss_dssp HHHHHHHHH----HTCSEEEEECCSEEE
T ss_pred HHHHHHHHH----hCCCCEEEEeCCccc
Confidence 999998873 579999999999983
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=174.92 Aligned_cols=152 Identities=21% Similarity=0.209 Sum_probs=127.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+|+|+||||+|+||++++++|+++|+ +|++++|++.+. ..+++++++|++|.+++.+++ +|+||
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~-----------~~~~~~~~~D~~~~~~~~~~~--~d~vi 70 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPRLDNPVGPLAELLPQLDGS--IDTAF 70 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTTEECCBSCHHHHGGGCCSC--CSEEE
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc-----------CCCceEEeccccCHHHHHHhh--hcEEE
Confidence 357899999999999999999999998 999999987641 246788899999999998888 99999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
|+||.... ...++++.+++|+.++.++++++.+. +.+++|++||...+ +.+ ...
T Consensus 71 ~~a~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~-~~~-----------------------~~~ 124 (215)
T 2a35_A 71 CCLGTTIK-EAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGAD-AKS-----------------------SIF 124 (215)
T ss_dssp ECCCCCHH-HHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCC-TTC-----------------------SSH
T ss_pred ECeeeccc-cCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccC-CCC-----------------------ccH
Confidence 99986432 23567888999999999999999887 77899999998554 211 145
Q ss_pred HHHHHHHHHHHHHHHHHhcCCc-EEEEccCceeCCCCC
Q 026852 165 YSLAKTLAEEAAWKFAKENGID-LVAIHPGTVIGPFFQ 201 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~-~~~v~pg~v~g~~~~ 201 (232)
|+.+|...|.+++ ..+++ ++++|||+++||...
T Consensus 125 y~~sK~~~e~~~~----~~~~~~~~~vrp~~v~g~~~~ 158 (215)
T 2a35_A 125 YNRVKGELEQALQ----EQGWPQLTIARPSLLFGPREE 158 (215)
T ss_dssp HHHHHHHHHHHHT----TSCCSEEEEEECCSEESTTSC
T ss_pred HHHHHHHHHHHHH----HcCCCeEEEEeCceeeCCCCc
Confidence 9999999999874 35899 999999999999754
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=185.39 Aligned_cols=177 Identities=10% Similarity=-0.051 Sum_probs=135.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHH-CCCeEEEEEcCCCCcchh----------h-hhhhcCCCCceEEEEcCCCCcchH
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTE----------H-LRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~----------~-~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
-.+|++|||||++|||+++++.|++ +|++|++++|+.+..... . .+.+.....++..+++|++|.+++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 3568999999999999999999999 999999999987653211 1 112233356788999999999998
Q ss_pred HHhhc-------CCCEEEEccccc---------------------------------------ccCCCCchhhhhHHHHH
Q 026852 74 DSAVD-------GCDGVFHTASPV---------------------------------------IFLSDNPQADIVDPAVM 107 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~---------------------------------------~~~~~~~~~~~~~~n~~ 107 (232)
+++++ ++|++|||||.. .+.+++.|+.++++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 88875 569999999852 22356678899999998
Q ss_pred HHH-HHHHHHHhh-C--CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-
Q 026852 108 GTL-NVLRSCAKV-H--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 182 (232)
Q Consensus 108 ~~~-~l~~~~~~~-~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~- 182 (232)
+++ .+++++.+. + ..++||++||.++..+.+.. ....|++||...+.+++.++.+
T Consensus 205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~--------------------~~~aY~AaKaal~~ltrsLA~El 264 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY--------------------WNGSIGAAKKDLDQKVLAIRESL 264 (405)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT--------------------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc--------------------cchHHHHHHHHHHHHHHHHHHHh
Confidence 887 677776543 2 23799999999776543320 0144888898888888888877
Q ss_pred --c-CCcEEEEccCceeCCCCCC
Q 026852 183 --N-GIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 183 --~-~i~~~~v~pg~v~g~~~~~ 202 (232)
+ |||+|+|+||.|.|++...
T Consensus 265 a~~~GIRVNaVaPG~i~T~~s~~ 287 (405)
T 3zu3_A 265 AAHGGGDARVSVLKAVVSQASSA 287 (405)
T ss_dssp HTTTSCEEEEEECCCCCCHHHHT
T ss_pred CcccCeEEEEEEeCCCcCchhhc
Confidence 5 9999999999999987543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=199.16 Aligned_cols=173 Identities=20% Similarity=0.129 Sum_probs=129.5
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC--------CcchhhhhhhcCCCCceEEEEcCCCCcch
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN--------SPKTEHLRELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (232)
|+...+++|++|||||++|||+++++.|+++|++|++++|+.. ....+..+++.....+.. +|++|.++
T Consensus 1 m~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~ 77 (604)
T 2et6_A 1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLD 77 (604)
T ss_dssp -CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTC
T ss_pred CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHH
Confidence 3445688999999999999999999999999999999988651 111122333332223332 57777665
Q ss_pred HHHhh-------cCCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccC
Q 026852 73 FDSAV-------DGCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLN 137 (232)
Q Consensus 73 ~~~~~-------~~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~ 137 (232)
+++++ .++|++|||||.. .+.+.++|+.++++|+.|++++++++.+.+ +.++||++||..+..+.
T Consensus 78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~ 157 (604)
T 2et6_A 78 GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN 157 (604)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence 55544 3689999999953 335667899999999999999999998875 34799999999887654
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
+. ...|++||.+...+.+.++.+ +||+|++|+|| +.|++
T Consensus 158 ~~----------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m 199 (604)
T 2et6_A 158 FG----------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM 199 (604)
T ss_dssp TT----------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHH
T ss_pred CC----------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcc
Confidence 33 245888888888888888877 59999999998 57765
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=170.00 Aligned_cols=153 Identities=16% Similarity=0.158 Sum_probs=117.9
Q ss_pred cEEEEECCCChhHHHHHHHHH-HCCCeEEEEEcCCC-CcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPN-SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|+|+||||+|+||++++++|+ +.|++|++++|+++ +.. ++.....++.++++|++|.+++.++++++|+||||
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP-----PEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVG 80 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSC-----HHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEES
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccch-----hhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEc
Confidence 679999999999999999999 89999999999875 322 22112457899999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
||.. |+. +.++++++.+. +.++||++||...+.+.+. . . ...+.......|+
T Consensus 81 ag~~--------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~-----~-~------~~~~~~~~~~~y~ 132 (221)
T 3r6d_A 81 AMES--------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPV-----A-L------EKWTFDNLPISYV 132 (221)
T ss_dssp CCCC--------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCH-----H-H------HHHHHHTSCHHHH
T ss_pred CCCC--------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCc-----c-c------ccccccccccHHH
Confidence 9842 344 88888888776 7789999999865432111 0 0 0000111111699
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
.+|...+.+++ +.++++++||||+++++
T Consensus 133 ~~K~~~e~~~~----~~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 133 QGERQARNVLR----ESNLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHHHHHH----HSCSEEEEEEECEEECC
T ss_pred HHHHHHHHHHH----hCCCCEEEEechhhcCC
Confidence 99999998774 57999999999999998
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-25 Score=185.53 Aligned_cols=167 Identities=21% Similarity=0.190 Sum_probs=138.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
|+||||||+|+||++++++|+++|+ +|+..+|+ +|.+++.++++++|+|||+|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~~~d~Vih~a 54 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALLKADFIVHLA 54 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHHHCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhccCCEEEECC
Confidence 4799999999999999999999998 77776664 57788888899999999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCcc-EEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK-RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
|... .+.+.+.+++|+.++.++++++.+. +.+ ++|++||.... + ...|+
T Consensus 55 ~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~-~-------------------------~~~Y~ 104 (369)
T 3st7_A 55 GVNR---PEHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQAT-Q-------------------------DNPYG 104 (369)
T ss_dssp CSBC---TTCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGG-S-------------------------CSHHH
T ss_pred cCCC---CCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhc-C-------------------------CCCch
Confidence 8654 2456678889999999999999887 555 99999999543 2 14599
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc-chHHHHHHHHcCC--CCCCccceeeeec
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
.+|.++|.+++.++++.+++++++||++++||...+... ....++.....+. .+.++.+.++|+|
T Consensus 105 ~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (369)
T 3st7_A 105 ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNY 172 (369)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEE
Confidence 999999999999999899999999999999998766433 4455666666666 5567888999987
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-25 Score=198.02 Aligned_cols=171 Identities=18% Similarity=0.135 Sum_probs=132.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCC-CCcchHHH----hhcC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-LEEGSFDS----AVDG 79 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~----~~~~ 79 (232)
.+++|++|||||++|||+++++.|+++|++|++.+|... .+..+++.....++..+.+|+ .+.+.+.+ .+.+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~---~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA---TKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH---HHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 478899999999999999999999999999999887431 133334433345677888999 55443222 2347
Q ss_pred CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|++|||||.. .+.+.++|+.++++|+.|++++++++.+.+ +.++||++||..+..+.+.
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~------------ 463 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG------------ 463 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC------------
Confidence 89999999953 235667899999999999999999998875 3479999999977765432
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|++||.+...+.+.++.+ +||+|++|+||. .|++..
T Consensus 464 ----------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~ 505 (604)
T 2et6_A 464 ----------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTL 505 (604)
T ss_dssp ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--
T ss_pred ----------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccc
Confidence 245899999888888888877 599999999995 888743
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=184.55 Aligned_cols=177 Identities=13% Similarity=-0.020 Sum_probs=134.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHH-CCCeEEEEEcCCCCcchh-----------hhhhhcCCCCceEEEEcCCCCcchHH
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTE-----------HLRELDGATERLHLFKANLLEEGSFD 74 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~~~~~~D~~~~~~~~ 74 (232)
.+|++|||||++|||+++++.|++ +|++|++++|+....... ..+.+...+.+...+++|++|.++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 478999999999999999999999 999999999987654321 11233333567889999999999887
Q ss_pred Hhhc--------CCCEEEEccccc---------------------------------------ccCCCCchhhhhHHHHH
Q 026852 75 SAVD--------GCDGVFHTASPV---------------------------------------IFLSDNPQADIVDPAVM 107 (232)
Q Consensus 75 ~~~~--------~~d~vi~~Ag~~---------------------------------------~~~~~~~~~~~~~~n~~ 107 (232)
++++ ++|++|||||.. .+.+.+.|+.++++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 7653 579999999741 02345677888888888
Q ss_pred HHH-HHHHHHHhh-C--CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-
Q 026852 108 GTL-NVLRSCAKV-H--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE- 182 (232)
Q Consensus 108 ~~~-~l~~~~~~~-~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~- 182 (232)
+++ .+++++.+. + ..++||++||.++..+.+ .+ ....|++||++.+.+.+.++.+
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p-----------------~~---~~~aY~ASKaAl~~lTrsLA~El 279 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWP-----------------IY---WHGALGKAKVDLDRTAQRLNARL 279 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH-----------------HH---TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC-----------------Cc---cchHHHHHHHHHHHHHHHHHHHh
Confidence 776 777776543 2 247999999997654321 11 1145899999999999888887
Q ss_pred --cCCcEEEEccCceeCCCCCCC
Q 026852 183 --NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 183 --~~i~~~~v~pg~v~g~~~~~~ 203 (232)
+|||||+|+||.|.||+....
T Consensus 280 a~~GIRVNaVaPG~i~T~~~~~i 302 (422)
T 3s8m_A 280 AKHGGGANVAVLKSVVTQASAAI 302 (422)
T ss_dssp HTTTCEEEEEEECCCCCTTGGGS
T ss_pred CccCEEEEEEEcCCCcChhhhcC
Confidence 599999999999999987543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=188.03 Aligned_cols=171 Identities=21% Similarity=0.216 Sum_probs=138.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc--chhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP--KTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d 81 (232)
.++++|||||+||||++++++|+++|+ +|++++|+.... ..+..+++.....++.+++||++|.+++.+++++ +|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 568999999999999999999999999 699999986422 1233344555566899999999999999999976 99
Q ss_pred EEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChh
Q 026852 82 GVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV 156 (232)
Q Consensus 82 ~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~ 156 (232)
+||||||... ..+.+.++.++++|+.|+.++.+++.+..+.++||++||..+.++...
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g----------------- 400 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG----------------- 400 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT-----------------
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC-----------------
Confidence 9999999643 245567788999999999999998765435689999999977766433
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCce-eCCCC
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV-IGPFF 200 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v-~g~~~ 200 (232)
...|+.+|.+.+.+++.+ +..|+++++|+||.+ .+++.
T Consensus 401 -----~~~YaaaKa~ld~la~~~-~~~gi~v~sv~pG~~~~tgm~ 439 (511)
T 2z5l_A 401 -----QGAYAAANAALDALAERR-RAAGLPATSVAWGLWGGGGMA 439 (511)
T ss_dssp -----BHHHHHHHHHHHHHHHHH-HTTTCCCEEEEECCBCSTTCC
T ss_pred -----CHHHHHHHHHHHHHHHHH-HHcCCcEEEEECCcccCCccc
Confidence 255999999999998865 356999999999999 56554
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=188.00 Aligned_cols=170 Identities=18% Similarity=0.153 Sum_probs=138.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC-----
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVDG----- 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 79 (232)
++++|||||+||||++++++|+++|+ +|++++|+..... .+..+++...+.++.+++||++|.+++.++++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 37999999999999999999999998 7888898743221 233344544567899999999999999999864
Q ss_pred -CCEEEEccccc-c-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 80 -CDGVFHTASPV-I-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 80 -~d~vi~~Ag~~-~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|+||||||.. . ..+.+.++.++++|+.|++++.+++.+. ..++||++||..+.++...
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~~g------------- 384 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVWGSGG------------- 384 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTTCTT-------------
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcCCCCC-------------
Confidence 69999999965 2 2445677899999999999999999887 6789999999988876543
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+++|.+.+.+.+.+. ..|+++++|+||.+.+++..
T Consensus 385 ---------~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~ 423 (496)
T 3mje_A 385 ---------QPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMA 423 (496)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-
T ss_pred ---------cHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccc
Confidence 2559999999999987654 46999999999999876643
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.7e-24 Score=187.97 Aligned_cols=190 Identities=19% Similarity=0.163 Sum_probs=138.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+|+||||||+|+||++++++|++.|++|++++|++.+.. .+.+|+.+ .+.++++++|+|||+|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------~v~~d~~~--~~~~~l~~~D~Vih~A 209 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------KRFWDPLN--PASDLLDGADVLVHLA 209 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------CEECCTTS--CCTTTTTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------ceeecccc--hhHHhcCCCCEEEECC
Confidence 679999999999999999999999999999999986421 15677764 3457788999999999
Q ss_pred cccc--cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceecc-CCCCCCCccccccCCCCChhhccccchh
Q 026852 88 SPVI--FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLL-NETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 88 g~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
|... ......+...+++|+.++.++++++.+..+.++||++||.+ .|+ ... ..+++|+... ....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~-vyg~~~~----~~~~~E~~~~-------~~~~ 277 (516)
T 3oh8_A 210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVG-FYGHDRG----DEILTEESES-------GDDF 277 (516)
T ss_dssp CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGG-GGCSEEE----EEEECTTSCC-------CSSH
T ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcce-EecCCCC----CCccCCCCCC-------CcCh
Confidence 8642 23456678899999999999999855544778999999985 444 211 3344555433 1245
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
|+.+|...+.+.. ++...|++++++|||+|+||.. .....++.....+. .++++.+.++|+|
T Consensus 278 y~~~~~~~E~~~~-~~~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~ 341 (516)
T 3oh8_A 278 LAEVCRDWEHATA-PASDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIA 341 (516)
T ss_dssp HHHHHHHHHHTTH-HHHHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEE
T ss_pred HHHHHHHHHHHHH-HHHhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEe
Confidence 8888888877654 3456799999999999999983 22222222222222 7889999999987
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=192.12 Aligned_cols=172 Identities=16% Similarity=0.144 Sum_probs=137.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEE-EcCCCC------------cchhhhhhhcCCCCceEEEEcCCCCcc
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKAT-VRDPNS------------PKTEHLRELDGATERLHLFKANLLEEG 71 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~-~r~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (232)
-+++++|||||+||||.+++++|+++|+. |+++ +|+... ...+..+++...+.++.+++||++|.+
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 36789999999999999999999999997 6666 887522 112334444444568999999999999
Q ss_pred hHHHhhcC------CCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCC----ccEEEEecccceecc
Q 026852 72 SFDSAVDG------CDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHS----IKRVVLTSSIGAMLL 136 (232)
Q Consensus 72 ~~~~~~~~------~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~vSS~~~~~~ 136 (232)
++.+++++ +|+||||||... ..+.+.++.++++|+.|++++.+++.+.+. .++||++||..+..+
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 99999875 599999999643 345667889999999999999999998742 679999999988876
Q ss_pred CCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 137 NETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
... ...|+++|.+.+.+...+. ..|+++++|+||.+.|++.
T Consensus 409 ~~g----------------------~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~ 449 (525)
T 3qp9_A 409 GAG----------------------QGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRV 449 (525)
T ss_dssp CTT----------------------CHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGG
T ss_pred CCC----------------------CHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCccccccc
Confidence 543 2559999999999875442 3599999999999988876
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=194.70 Aligned_cols=170 Identities=18% Similarity=0.098 Sum_probs=126.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc---------CCCCcchhhhhhhcCCCCceEEEEcCCCCcchHH
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR---------DPNSPKTEHLRELDGATERLHLFKANLLEEGSFD 74 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 74 (232)
..+++|++|||||+||||+++++.|+++|++|++++| +.+... ...+++......+ .+|++|.+++.
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~-~~~~~i~~~~~~~---~~D~~d~~~~~ 90 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAAD-IVVDEIRKAGGEA---VADYNSVIDGA 90 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHH-HHHHHHHHTTCCE---EECCCCGGGHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHH-HHHHHHHHhCCeE---EEEeCCHHHHH
Confidence 4588999999999999999999999999999999988 332221 2333333322222 37999999988
Q ss_pred Hhhc-------CCCEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCC
Q 026852 75 SAVD-------GCDGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNET 139 (232)
Q Consensus 75 ~~~~-------~~d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~ 139 (232)
++++ ++|++|||||... ..+.+.|+.++++|+.|++++++++.+.+ +.++||++||..+.++...
T Consensus 91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~ 170 (613)
T 3oml_A 91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG 170 (613)
T ss_dssp HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence 8876 4699999999542 34567889999999999999999998764 4479999999988766443
Q ss_pred CCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 140 PMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 140 ~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|++||++.+.+++.++.+ +||++++|+||.+ +++.
T Consensus 171 ----------------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~ 211 (613)
T 3oml_A 171 ----------------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMT 211 (613)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred ----------------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhh
Confidence 245999999999999988887 4899999999975 5543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-24 Score=174.10 Aligned_cols=176 Identities=18% Similarity=0.129 Sum_probs=127.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+|||||| |+||++++++|+++|++|++++|++.+.. .+. ..+++++++|++|.+ ++++|+|||+|+
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~-----~~~~~~~~~D~~d~~-----~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME--AIR-----ASGAEPLLWPGEEPS-----LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH--HHH-----HTTEEEEESSSSCCC-----CTTCCEEEECCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh--hHh-----hCCCeEEEecccccc-----cCCCCEEEECCC
Confidence 68999998 99999999999999999999999875321 111 146899999999965 788999999998
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhh-CCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKV-HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
+.... . ..+.++++++.+. .+.+++|++||. +.|+... ..+.+|+....| ...|+.
T Consensus 73 ~~~~~--~----------~~~~~l~~a~~~~~~~~~~~v~~Ss~-~vyg~~~----~~~~~E~~~~~p------~~~Y~~ 129 (286)
T 3ius_A 73 PDSGG--D----------PVLAALGDQIAARAAQFRWVGYLSTT-AVYGDHD----GAWVDETTPLTP------TAARGR 129 (286)
T ss_dssp CBTTB--C----------HHHHHHHHHHHHTGGGCSEEEEEEEG-GGGCCCT----TCEECTTSCCCC------CSHHHH
T ss_pred ccccc--c----------HHHHHHHHHHHhhcCCceEEEEeecc-eecCCCC----CCCcCCCCCCCC------CCHHHH
Confidence 64321 1 1245677777763 267899999998 4555432 345566554433 256999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
+|..+|.+++.+ .+++++++||++++||...... +...+. .+..+.+.++|+|
T Consensus 130 sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~ 184 (286)
T 3ius_A 130 WRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFS--------KLGKGGIRRIIKPGQVFSRIH 184 (286)
T ss_dssp HHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSST--------TSSSSCCCEEECTTCCBCEEE
T ss_pred HHHHHHHHHHhh---cCCCEEEEeccceECCCchHHH--------HHhcCCccccCCCCcccceEE
Confidence 999999998765 5999999999999999854321 223343 2333357777776
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=187.13 Aligned_cols=168 Identities=21% Similarity=0.257 Sum_probs=135.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC---
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVDGC--- 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--- 80 (232)
.++++|||||+||||++++++|+++|+. |++++|+..... .+..+++.....++.+++||++|.+++.++++++
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 5689999999999999999999999995 999999864221 1223334444567899999999999999998865
Q ss_pred ---CEEEEcccccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 81 ---DGVFHTASPVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 81 ---d~vi~~Ag~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
|+||||||... ..+.+.++.++++|+.|+.++.+++.+. +.++||++||..+.++...
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g------------- 370 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPG------------- 370 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT-------------
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCCC-------------
Confidence 99999999643 2456678899999999999999998876 7789999999977766443
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
...|+.+|.+.+.+...+. ..|+++++|+||.+.++
T Consensus 371 ---------~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~ 406 (486)
T 2fr1_A 371 ---------LGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGS 406 (486)
T ss_dssp ---------CTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC--
T ss_pred ---------CHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCC
Confidence 1349999999999887654 46999999999999886
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=174.72 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=119.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|+||||||+|+||++++++|+++ |++|++++|++++.. .+. ..+++++++|++|.+++.++++++|+|||+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 73 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS--TLA-----DQGVEVRHGDYNQPESLQKAFAGVSKLLFI 73 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh--HHh-----hcCCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence 46999999999999999999999 999999999875432 111 135789999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
|+... . . ++|+.++.++++++.+. +.++||++||.... .. ...|+
T Consensus 74 a~~~~----~---~--~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~-~~------------------------~~~y~ 118 (287)
T 2jl1_A 74 SGPHY----D---N--TLLIVQHANVVKAARDA-GVKHIAYTGYAFAE-ES------------------------IIPLA 118 (287)
T ss_dssp CCCCS----C---H--HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGG-GC------------------------CSTHH
T ss_pred CCCCc----C---c--hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC-CC------------------------CCchH
Confidence 98521 1 1 67999999999999886 78899999998542 11 02399
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
.+|..+|.+++ +++++++++|||.++++.
T Consensus 119 ~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 119 HVHLATEYAIR----TTNIPYTFLRNALYTDFF 147 (287)
T ss_dssp HHHHHHHHHHH----HTTCCEEEEEECCBHHHH
T ss_pred HHHHHHHHHHH----HcCCCeEEEECCEecccc
Confidence 99999998874 479999999999988765
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=177.96 Aligned_cols=176 Identities=10% Similarity=-0.065 Sum_probs=131.6
Q ss_pred CCCcEEEEECCCChhHHH--HHHHHHHCCCeEEEEEcCCCCcc----------hhhhh-hhcCCCCceEEEEcCCCCcch
Q 026852 6 GEEKVVCVTGASGFVASW--LVKLLLQRGYTVKATVRDPNSPK----------TEHLR-ELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~--~~~~l~~~g~~V~~~~r~~~~~~----------~~~~~-~~~~~~~~~~~~~~D~~~~~~ 72 (232)
..+|++|||||++|||++ +++.|+++|++|++++|+..... .+.+. .......++..+++|++|.++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 568999999999999999 99999999999999999865432 11222 222334678899999999999
Q ss_pred HHHhhc-------CCCEEEEccccc---------------------------------------ccCCCCchhhhhHHHH
Q 026852 73 FDSAVD-------GCDGVFHTASPV---------------------------------------IFLSDNPQADIVDPAV 106 (232)
Q Consensus 73 ~~~~~~-------~~d~vi~~Ag~~---------------------------------------~~~~~~~~~~~~~~n~ 106 (232)
++++++ ++|++|||||.. .+.+.+.++..+++|.
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~ 217 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG 217 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence 888775 469999999852 1124556778888887
Q ss_pred HHHH-HHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh
Q 026852 107 MGTL-NVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 182 (232)
Q Consensus 107 ~~~~-~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~ 182 (232)
.+.+ .+++++.+.+ ..++||++||.++..+.+. ...+.|++||++.+.+++.++.+
T Consensus 218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~--------------------~~~~aY~ASKaAL~~ltrsLA~E 277 (418)
T 4eue_A 218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKI--------------------YREGTIGIAKKDLEDKAKLINEK 277 (418)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTT--------------------TTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCc--------------------cccHHHHHHHHHHHHHHHHHHHH
Confidence 7776 6666665532 2468999999977654332 01144888888888888877776
Q ss_pred ----cCCcEEEEccCceeCCCCC
Q 026852 183 ----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 183 ----~~i~~~~v~pg~v~g~~~~ 201 (232)
+|||+++|+||.|.|++..
T Consensus 278 La~~~GIrVN~V~PG~v~T~~s~ 300 (418)
T 4eue_A 278 LNRVIGGRAFVSVNKALVTKASA 300 (418)
T ss_dssp HHHHHSCEEEEEECCCCCCHHHH
T ss_pred hCCccCeEEEEEECCcCcChhhh
Confidence 5899999999999998654
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=167.36 Aligned_cols=153 Identities=18% Similarity=0.157 Sum_probs=121.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~ 86 (232)
|+||||||+||||++++++|++ |++|++++|++.. . .+ +++|++|.+++.+++++ +|+|||+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~---~---------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~ 64 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI---Q---------GG---YKLDLTDFPRLEDFIIKKRPDVIINA 64 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC---T---------TC---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC---C---------CC---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence 3699999999999999999995 8999999998742 1 11 78999999999999986 9999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||.... ...++++..+++|+.++.++++++.+. + .+||++||...+.+... +.+|+....+ ...|
T Consensus 65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~iv~~SS~~~~~~~~~------~~~e~~~~~~------~~~Y 130 (273)
T 2ggs_A 65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-D-SYIVHISTDYVFDGEKG------NYKEEDIPNP------INYY 130 (273)
T ss_dssp CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEEEEGGGSCSSSC------SBCTTSCCCC------SSHH
T ss_pred CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-C-CeEEEEecceeEcCCCC------CcCCCCCCCC------CCHH
Confidence 986432 223567889999999999999999886 4 49999999966533211 3344433322 3569
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 197 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g 197 (232)
+.+|.+.|.+++ . +++.++||+.++|
T Consensus 131 ~~sK~~~e~~~~-----~-~~~~~iR~~~v~G 156 (273)
T 2ggs_A 131 GLSKLLGETFAL-----Q-DDSLIIRTSGIFR 156 (273)
T ss_dssp HHHHHHHHHHHC-----C-TTCEEEEECCCBS
T ss_pred HHHHHHHHHHHh-----C-CCeEEEecccccc
Confidence 999999999884 3 7889999999997
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=168.94 Aligned_cols=186 Identities=21% Similarity=0.194 Sum_probs=128.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+||||++++++|+++|++|++++|++.... + ..| +...+.++++|+|||+|+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~-------------~---~~~----~~~~~~l~~~d~vihla~ 60 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR-------------I---TWD----ELAASGLPSCDAAVNLAG 60 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE-------------E---EHH----HHHHHCCCSCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe-------------e---ecc----hhhHhhccCCCEEEEecc
Confidence 57999999999999999999999999999999875321 1 111 222355778999999998
Q ss_pred ccc-----cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 89 PVI-----FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 89 ~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
... .++.......++.|+.+|.++++++.... ...++|+.||. ++|+... +.+.+|+....+ .
T Consensus 61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~-~vyg~~~----~~~~~E~~p~~~------~ 129 (298)
T 4b4o_A 61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGV-AYYQPSL----TAEYDEDSPGGD------F 129 (298)
T ss_dssp CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEG-GGSCCCS----SCCBCTTCCCSC------S
T ss_pred CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeee-eeecCCC----CCcccccCCccc------c
Confidence 421 12334456788999999999999887762 33457888887 4555433 344455543332 1
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
..|+..+...+.. .+....+++++++||+.|+||.. .....++.....+. .++++.+.|+|||
T Consensus 130 ~~~~~~~~~~e~~--~~~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ih 194 (298)
T 4b4o_A 130 DFFSNLVTKWEAA--ARLPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIH 194 (298)
T ss_dssp SHHHHHHHHHHHH--HCCSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEE
T ss_pred chhHHHHHHHHHH--HHhhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCc
Confidence 3355555555443 22335689999999999999973 23333443444444 8899999999998
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=165.04 Aligned_cols=170 Identities=15% Similarity=0.175 Sum_probs=123.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
|+||||||+|+||++++++|++. |++|++++|++++... +. ..+++++++|++|++++.++++++|+|||+|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~~--~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a 73 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----DW--RGKVSVRQLDYFNQESMVEAFKGMDTVVFIP 73 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----GG--BTTBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----hh--hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 36999999999999999999998 9999999999864321 11 2468999999999999999999999999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
|.... ...|+.++.++++++.+. +.++||++||.+.....+ |..
T Consensus 74 ~~~~~---------~~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~~~~~--------------------------~~~ 117 (289)
T 3e48_A 74 SIIHP---------SFKRIPEVENLVYAAKQS-GVAHIIFIGYYADQHNNP--------------------------FHM 117 (289)
T ss_dssp CCCCS---------HHHHHHHHHHHHHHHHHT-TCCEEEEEEESCCSTTCC--------------------------STT
T ss_pred CCCcc---------chhhHHHHHHHHHHHHHc-CCCEEEEEcccCCCCCCC--------------------------Ccc
Confidence 85321 235889999999999887 789999999964221100 111
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
++... .++....+.|++++++|||+++++.. ..+....... .+..+.+.++|+|
T Consensus 118 ~~~~~--~~e~~~~~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~ 173 (289)
T 3e48_A 118 SPYFG--YASRLLSTSGIDYTYVRMAMYMDPLK--------PYLPELMNMHKLIYPAGDGRINYIT 173 (289)
T ss_dssp HHHHH--HHHHHHHHHCCEEEEEEECEESTTHH--------HHHHHHHHHTEECCCCTTCEEEEEC
T ss_pred chhHH--HHHHHHHHcCCCEEEEeccccccccH--------HHHHHHHHCCCEecCCCCceeeeEE
Confidence 11110 22233346799999999999998742 1222333222 6666778888876
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=170.86 Aligned_cols=182 Identities=14% Similarity=0.167 Sum_probs=130.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d 81 (232)
|.+|+||||||+|+||++++++|++.|++|++++|+++.... ..++.+. ..+++++++|++|.+++.++++ ++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEID 85 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence 455789999999999999999999999999999998743221 1122222 2568999999999999999999 999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||+||.. |+.++.++++++.+. + .+++|+ |+.+. . .+|.....
T Consensus 86 ~Vi~~a~~~--------------n~~~~~~l~~aa~~~-g~v~~~v~-S~~g~----~--------~~e~~~~~------ 131 (346)
T 3i6i_A 86 IVVSTVGGE--------------SILDQIALVKAMKAV-GTIKRFLP-SEFGH----D--------VNRADPVE------ 131 (346)
T ss_dssp EEEECCCGG--------------GGGGHHHHHHHHHHH-CCCSEEEC-SCCSS----C--------TTTCCCCT------
T ss_pred EEEECCchh--------------hHHHHHHHHHHHHHc-CCceEEee-cccCC----C--------CCccCcCC------
Confidence 999999752 778899999999988 6 888886 43311 1 11111111
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
....|+.+|...+++++ +.|++++++|||++++......... ......+. +++++.+.++|+|
T Consensus 132 p~~~y~~sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~~~----~~~~~~~~~~~~~g~g~~~~~~i~ 197 (346)
T 3i6i_A 132 PGLNMYREKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNIHP----SEVLPPTDFFQIYGDGNVKAYFVA 197 (346)
T ss_dssp THHHHHHHHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEEC
T ss_pred CcchHHHHHHHHHHHHH----HcCCCEEEEEecccccccCcccccc----ccccCCCceEEEccCCCceEEecC
Confidence 12559999999998875 4799999999999999764332211 00111222 6778888888876
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=166.00 Aligned_cols=156 Identities=14% Similarity=0.157 Sum_probs=122.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+|+|+||||+|+||++++++|+++| ++|++++|++++.....+ . ..+++++++|++|++++.++++++|+|||+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l---~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKEL---R--LQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHH---H--HTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHH---H--HCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 4789999999999999999999998 999999999865321111 1 135789999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
|+..... ..+.|+.++.++++++.+. +.++||++||. +.++... . .....|+
T Consensus 80 a~~~~~~-------~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~-~~~~~~~----------~---------~~~~~y~ 131 (299)
T 2wm3_A 80 TNYWESC-------SQEQEVKQGKLLADLARRL-GLHYVVYSGLE-NIKKLTA----------G---------RLAAAHF 131 (299)
T ss_dssp CCHHHHT-------CHHHHHHHHHHHHHHHHHH-TCSEEEECCCC-CHHHHTT----------T---------SCCCHHH
T ss_pred CCCCccc-------cchHHHHHHHHHHHHHHHc-CCCEEEEEcCc-cccccCC----------C---------cccCchh
Confidence 9753211 2456888999999999887 78999997776 4333211 0 0124489
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
.+|...|.+++ +.|++++++|||+++++..
T Consensus 132 ~sK~~~e~~~~----~~gi~~~ilrp~~~~~~~~ 161 (299)
T 2wm3_A 132 DGKGEVEEYFR----DIGVPMTSVRLPCYFENLL 161 (299)
T ss_dssp HHHHHHHHHHH----HHTCCEEEEECCEEGGGGG
T ss_pred hHHHHHHHHHH----HCCCCEEEEeecHHhhhch
Confidence 99999998874 3699999999999999754
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=158.98 Aligned_cols=157 Identities=17% Similarity=0.241 Sum_probs=108.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+.+|+||||||+||||++++++|+++| ++|++++|++++... + ...++.++++|++|.+++.++++++|+||
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv 93 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----P--YPTNSQIIMGDVLNHAALKQAMQGQDIVY 93 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----S--CCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----c--ccCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence 345799999999999999999999999 899999999754321 1 12468999999999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
||||.. .. ...+.++++++.+. +.++||++||...+.+.+... .+..+.... .....
T Consensus 94 ~~a~~~------~~-------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~---~~~~~~~~~------~~~~~ 150 (236)
T 3qvo_A 94 ANLTGE------DL-------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKF---VEWNNAVIG------EPLKP 150 (236)
T ss_dssp EECCST------TH-------HHHHHHHHHHHHHT-TCCEEEEECCCCC-------------------C------GGGHH
T ss_pred EcCCCC------ch-------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCccc---ccchhhccc------chHHH
Confidence 999741 11 13456788888776 788999999986553322110 011111110 11122
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
|..+ +..+ ++.|+++++||||+++++..
T Consensus 151 ~~~~----~~~l----~~~gi~~~~vrPg~i~~~~~ 178 (236)
T 3qvo_A 151 FRRA----ADAI----EASGLEYTILRPAWLTDEDI 178 (236)
T ss_dssp HHHH----HHHH----HTSCSEEEEEEECEEECCSC
T ss_pred HHHH----HHHH----HHCCCCEEEEeCCcccCCCC
Confidence 4443 3322 36799999999999998753
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=166.12 Aligned_cols=142 Identities=18% Similarity=0.286 Sum_probs=112.6
Q ss_pred EEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+||||||+|+||++++++|+++ |++|++++|++++.. .+. ..+++++++|++|.+++.++++++|+|||+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 73 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ--ALA-----AQGITVRQADYGDEAALTSALQGVEKLLLIS 73 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh--hhh-----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 4899999999999999999999 999999999876432 111 1357899999999999999999999999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
|... +.|+.++.++++++.+. +.++||++||.... . . ...|+.
T Consensus 74 ~~~~-----------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~-~--~----------------------~~~y~~ 116 (286)
T 2zcu_A 74 SSEV-----------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHAD-T--S----------------------PLGLAD 116 (286)
T ss_dssp -------------------CHHHHHHHHHHHH-TCCEEEEEEETTTT-T--C----------------------CSTTHH
T ss_pred CCCc-----------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC-C--C----------------------cchhHH
Confidence 8421 14788999999999887 78999999998543 1 0 023999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
+|...|.+++ +.+++++++|||++.++.
T Consensus 117 sK~~~e~~~~----~~~~~~~ilrp~~~~~~~ 144 (286)
T 2zcu_A 117 EHIETEKMLA----DSGIVYTLLRNGWYSENY 144 (286)
T ss_dssp HHHHHHHHHH----HHCSEEEEEEECCBHHHH
T ss_pred HHHHHHHHHH----HcCCCeEEEeChHHhhhh
Confidence 9999998874 369999999999877653
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=6e-23 Score=189.16 Aligned_cols=168 Identities=18% Similarity=0.228 Sum_probs=138.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHH-HCCC-eEEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC---
Q 026852 7 EEKVVCVTGASGFVASWLVKLLL-QRGY-TVKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVDG--- 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~-~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 79 (232)
.++++|||||+||||+++++.|+ ++|+ +|++++|+....+ .+..+++...+.++.+++||++|.++++++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 57899999999999999999999 7898 5999999843221 234455555567899999999999999999874
Q ss_pred ---CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCC
Q 026852 80 ---CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 80 ---~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+||||||.. ...+.+.|+..+++|+.|++++.+++.+.+ +||++||..+..+.+.
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l---~iV~~SS~ag~~g~~g------------ 673 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV---ALVLFSSVSGVLGSGG------------ 673 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS---EEEEEEETHHHHTCSS------------
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC---EEEEEccHHhcCCCCC------------
Confidence 49999999854 336678899999999999999999997765 9999999988877654
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
...|+++|.+.+.+.+.++ ..|+++++|+||.+.|++.
T Consensus 674 ----------~~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~ 711 (795)
T 3slk_A 674 ----------QGNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGM 711 (795)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCH
T ss_pred ----------CHHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchh
Confidence 2559999998888877654 3699999999999998753
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-22 Score=192.94 Aligned_cols=172 Identities=14% Similarity=0.096 Sum_probs=130.8
Q ss_pred CCCCcEEEEECCCCh-hHHHHHHHHHHCCCeEEEEE-cCCCCcchhhh----hhhcCCCCceEEEEcCCCCcchHHHhhc
Q 026852 5 EGEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATV-RDPNSPKTEHL----RELDGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~-iG~~~~~~l~~~g~~V~~~~-r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
.+++|++|||||++| ||+++++.|+++|++|++++ |+.++.. +.. +++.....++.++++|++|.+++.++++
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~-~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~ 750 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT-DYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 750 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHH-HHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHH-HHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence 478899999999999 99999999999999999984 5554322 122 2222234678999999999999988763
Q ss_pred -------------CCCEEEEccccccc------CC--CCchhhhhHHHHHHHHHHHHHH--HhhC---CccEEEEecccc
Q 026852 79 -------------GCDGVFHTASPVIF------LS--DNPQADIVDPAVMGTLNVLRSC--AKVH---SIKRVVLTSSIG 132 (232)
Q Consensus 79 -------------~~d~vi~~Ag~~~~------~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~---~~~~iv~vSS~~ 132 (232)
++|++|||||.... .+ .+.++.++++|+.+++++++++ .+.+ +.++||++||..
T Consensus 751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a 830 (1887)
T 2uv8_A 751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 830 (1887)
T ss_dssp HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence 48999999995422 23 4668899999999999999987 4443 236999999987
Q ss_pred eeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHH-HHHHHHhcC--CcEEEEccCcee-CCCCC
Q 026852 133 AMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEA-AWKFAKENG--IDLVAIHPGTVI-GPFFQ 201 (232)
Q Consensus 133 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~-~~~~~~~~~--i~~~~v~pg~v~-g~~~~ 201 (232)
+..+. ...|+.||++.+.+ .+.++.+.+ |+|++|+||+|. |++..
T Consensus 831 g~~gg------------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~ 879 (1887)
T 2uv8_A 831 GTFGG------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMS 879 (1887)
T ss_dssp TCSSC------------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC----
T ss_pred hccCC------------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccc
Confidence 66441 13499999999998 666666543 999999999999 67643
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-22 Score=190.26 Aligned_cols=171 Identities=14% Similarity=0.089 Sum_probs=131.2
Q ss_pred CCCCCcEEEEECCCCh-hHHHHHHHHHHCCCeEEEE-EcCCCCcchhhhhhh----cCCCCceEEEEcCCCCcchHHHhh
Q 026852 4 GEGEEKVVCVTGASGF-VASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLREL----DGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~-iG~~~~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
..+++|++|||||+|| ||+++++.|+++|++|+++ .|+.++.. +..+++ .....++.++++|++|.+++.+++
T Consensus 472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~le-e~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV 550 (1688)
T 2pff_A 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT-DYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 550 (1688)
T ss_dssp CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTT-THHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHH-HHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence 3478899999999998 9999999999999999998 46654433 222232 222457899999999999998876
Q ss_pred c-------------CCCEEEEccccccc------CC--CCchhhhhHHHHHHHHHHHHHH--HhhC---CccEEEEeccc
Q 026852 78 D-------------GCDGVFHTASPVIF------LS--DNPQADIVDPAVMGTLNVLRSC--AKVH---SIKRVVLTSSI 131 (232)
Q Consensus 78 ~-------------~~d~vi~~Ag~~~~------~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~---~~~~iv~vSS~ 131 (232)
+ ++|+||||||.... .+ .+.++.++++|+.++.++++++ .+.+ +.++||++||.
T Consensus 551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi 630 (1688)
T 2pff_A 551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN 630 (1688)
T ss_dssp HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence 3 48999999995322 22 4567899999999999999988 4543 23699999998
Q ss_pred ceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHH-HHHHHHhc--CCcEEEEccCcee-CCC
Q 026852 132 GAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEA-AWKFAKEN--GIDLVAIHPGTVI-GPF 199 (232)
Q Consensus 132 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~-~~~~~~~~--~i~~~~v~pg~v~-g~~ 199 (232)
.+..+. ...|++||++.+.+ .+.++.+. .|++++|+||+|. |++
T Consensus 631 AG~~Gg------------------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M 678 (1688)
T 2pff_A 631 HGTFGG------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGL 678 (1688)
T ss_dssp TTTSSC------------------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSS
T ss_pred HhccCC------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcc
Confidence 766431 13499999999998 44444443 3999999999999 565
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=162.85 Aligned_cols=152 Identities=18% Similarity=0.208 Sum_probs=118.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcC-CCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN-LLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~d~vi 84 (232)
+++|+|+||||+|+||++++++|+++|++|++++|++++... ..+.. ..+++++++| ++|.+++.++++++|+||
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~l~~-~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi 78 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA---EELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAF 78 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH---HHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH---HHHhh-cCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence 345789999999999999999999999999999999865321 12221 2368899999 999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccce-eccCCCCCCCccccccCCCCChhhccccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGA-MLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
|+++... .+.|..+ .++++++.+. + .++||++||... .++.. ..
T Consensus 79 ~~a~~~~----------~~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~~~~~----------------------~~ 124 (352)
T 1xgk_A 79 INTTSQA----------GDEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSLYGPW----------------------PA 124 (352)
T ss_dssp ECCCSTT----------SCHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGGTSSC----------------------CC
T ss_pred EcCCCCC----------cHHHHHH-HHHHHHHHHc-CCccEEEEeCCccccccCCC----------------------CC
Confidence 9986421 1347776 9999999887 6 789999999852 22110 01
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
..|+.||..+|.+++ ..+++++++|||+ +++..
T Consensus 125 ~~y~~sK~~~E~~~~----~~gi~~~ivrpg~-~g~~~ 157 (352)
T 1xgk_A 125 VPMWAPKFTVENYVR----QLGLPSTFVYAGI-YNNNF 157 (352)
T ss_dssp CTTTHHHHHHHHHHH----TSSSCEEEEEECE-EGGGC
T ss_pred ccHHHHHHHHHHHHH----HcCCCEEEEecce-ecCCc
Confidence 348899999999885 3599999999985 56654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-22 Score=190.47 Aligned_cols=173 Identities=15% Similarity=0.067 Sum_probs=132.4
Q ss_pred CCCCcEEEEECCCCh-hHHHHHHHHHHCCCeEEEEE-cCCCCcch---hhhhhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 5 EGEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATV-RDPNSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~-iG~~~~~~l~~~g~~V~~~~-r~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
.+++|++|||||+|| ||+++++.|+++|++|++++ |+.+.... +...++.....++.+++||++|.+++.++++
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 478899999999999 99999999999999999986 44432211 1112333334678999999999999988763
Q ss_pred ----------CCCEEEEccccccc------CC--CCchhhhhHHHHHHHHHHHHH--HHhhC---CccEEEEecccceec
Q 026852 79 ----------GCDGVFHTASPVIF------LS--DNPQADIVDPAVMGTLNVLRS--CAKVH---SIKRVVLTSSIGAML 135 (232)
Q Consensus 79 ----------~~d~vi~~Ag~~~~------~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~---~~~~iv~vSS~~~~~ 135 (232)
.+|+||||||.... .+ .+.++.++++|+.+++++++. +.+.+ +.++||++||..+..
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 48999999995422 22 356789999999999999877 44443 236999999987765
Q ss_pred cCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-c--CCcEEEEccCcee-CCCCC
Q 026852 136 LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-N--GIDLVAIHPGTVI-GPFFQ 201 (232)
Q Consensus 136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-~--~i~~~~v~pg~v~-g~~~~ 201 (232)
+. ...|+.||++.+.++..++.+ . +|++++|+||++. |++..
T Consensus 809 gg------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~ 854 (1878)
T 2uv9_A 809 GN------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS 854 (1878)
T ss_dssp SC------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS
T ss_pred CC------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc
Confidence 41 134999999999998766554 2 3999999999999 88753
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-21 Score=158.89 Aligned_cols=157 Identities=17% Similarity=0.250 Sum_probs=115.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchh---hhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE---HLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+|+|+||||+|+||++++++|+++|++|++++|+.+....+ .+..+. ..+++++++|++|++++.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 36899999999999999999999999999999987542111 122222 2468899999999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
|+|+.... ..|+.++.++++++.+. + .+|||+ |+. +. .. ... +....| ...
T Consensus 82 ~~a~~~~~----------~~~~~~~~~l~~aa~~~-g~v~~~v~-S~~-g~---~~----~~~---~~~~~p-----~~~ 133 (313)
T 1qyd_A 82 SALAGGVL----------SHHILEQLKLVEAIKEA-GNIKRFLP-SEF-GM---DP----DIM---EHALQP-----GSI 133 (313)
T ss_dssp ECCCCSSS----------STTTTTHHHHHHHHHHS-CCCSEEEC-SCC-SS---CT----TSC---CCCCSS-----TTH
T ss_pred ECCccccc----------hhhHHHHHHHHHHHHhc-CCCceEEe-cCC-cC---Cc----ccc---ccCCCC-----Ccc
Confidence 99986432 12677889999999887 6 889985 433 21 11 000 000011 023
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
.| .+|...|++++ +.+++++++|||+++++.
T Consensus 134 ~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~ 164 (313)
T 1qyd_A 134 TF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYF 164 (313)
T ss_dssp HH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHH
T ss_pred hH-HHHHHHHHHHH----hcCCCeEEEEeceecccc
Confidence 48 99999888774 579999999999998754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=156.93 Aligned_cols=156 Identities=19% Similarity=0.210 Sum_probs=111.2
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
|+.+..+++|+||||+|+||++++++|+++|++|++++|+++... +.+..+. ..+++++++|++|.+++.++++++|
T Consensus 5 m~~~~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~~~d 81 (318)
T 2r6j_A 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT-TLLDEFQ--SLGAIIVKGELDEHEKLVELMKKVD 81 (318)
T ss_dssp ----CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH-HHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred ccccCCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh-hHHHHhh--cCCCEEEEecCCCHHHHHHHHcCCC
Confidence 443322358999999999999999999999999999999985221 2222222 2358899999999999999999999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKE 160 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 160 (232)
+|||+|+... +.++.++++++.+. + .++||+ |+. + ... ++.....|.
T Consensus 82 ~vi~~a~~~~--------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-g---~~~--------~~~~~~~p~---- 129 (318)
T 2r6j_A 82 VVISALAFPQ--------------ILDQFKILEAIKVA-GNIKRFLP-SDF-G---VEE--------DRINALPPF---- 129 (318)
T ss_dssp EEEECCCGGG--------------STTHHHHHHHHHHH-CCCCEEEC-SCC-S---SCT--------TTCCCCHHH----
T ss_pred EEEECCchhh--------------hHHHHHHHHHHHhc-CCCCEEEe-ecc-c---cCc--------ccccCCCCc----
Confidence 9999997531 34578889998887 5 789884 432 1 111 011111111
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
...| .+|...+.+++ +.+++++++|||++.+.
T Consensus 130 -~~~y-~sK~~~e~~~~----~~~~~~~~lr~~~~~~~ 161 (318)
T 2r6j_A 130 -EALI-ERKRMIRRAIE----EANIPYTYVSANCFASY 161 (318)
T ss_dssp -HHHH-HHHHHHHHHHH----HTTCCBEEEECCEEHHH
T ss_pred -chhH-HHHHHHHHHHH----hcCCCeEEEEcceehhh
Confidence 2348 89999888764 57999999999988654
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-20 Score=151.65 Aligned_cols=153 Identities=15% Similarity=0.280 Sum_probs=111.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC-CCcc----hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPK----TEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
+|+|+||||+|+||++++++|+++|++|++++|++ .... .+.+..+. ..+++++++|++|.+++.++++++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 46799999999999999999999999999999987 2111 01122221 23588999999999999999999999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
|||+||... +.++.++++++.+. + .+|||+ |+. +. .. ++.....|.
T Consensus 80 vi~~a~~~~--------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-g~---~~--------~~~~~~~p~----- 126 (307)
T 2gas_A 80 VICAAGRLL--------------IEDQVKIIKAIKEA-GNVKKFFP-SEF-GL---DV--------DRHDAVEPV----- 126 (307)
T ss_dssp EEECSSSSC--------------GGGHHHHHHHHHHH-CCCSEEEC-SCC-SS---CT--------TSCCCCTTH-----
T ss_pred EEECCcccc--------------cccHHHHHHHHHhc-CCceEEee-ccc-cc---Cc--------ccccCCCcc-----
Confidence 999998532 34678889998887 6 789883 332 21 11 011111111
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
...| .+|...+.+++ +.+++++++|||++.++..
T Consensus 127 ~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~ 160 (307)
T 2gas_A 127 RQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFL 160 (307)
T ss_dssp HHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTG
T ss_pred hhHH-HHHHHHHHHHH----HcCCCeEEEEcceeecccc
Confidence 2458 99999888764 4689999999999988653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-20 Score=153.47 Aligned_cols=152 Identities=20% Similarity=0.318 Sum_probs=111.9
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc--ch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--KT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~--~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+|+|+||||+|+||++++++|+++|++|++++|+.... .. +.+..+. ..+++++++|++|.+++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 36899999999999999999999999999999987542 11 1122222 246889999999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+|+... +.++.++++++.+. + .+|||+ |+.+.. . ++.....|. .
T Consensus 82 i~~a~~~~--------------~~~~~~l~~aa~~~-g~v~~~v~-S~~g~~----~--------~~~~~~~p~-----~ 128 (308)
T 1qyc_A 82 ISTVGSLQ--------------IESQVNIIKAIKEV-GTVKRFFP-SEFGND----V--------DNVHAVEPA-----K 128 (308)
T ss_dssp EECCCGGG--------------SGGGHHHHHHHHHH-CCCSEEEC-SCCSSC----T--------TSCCCCTTH-----H
T ss_pred EECCcchh--------------hhhHHHHHHHHHhc-CCCceEee-cccccC----c--------cccccCCcc-----h
Confidence 99997531 34567889998887 6 889984 443211 1 011111111 2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
..| .+|...+.+++ +.+++++++|||+++++.
T Consensus 129 ~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~ 160 (308)
T 1qyc_A 129 SVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYF 160 (308)
T ss_dssp HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHH
T ss_pred hHH-HHHHHHHHHHH----hcCCCeEEEEeceecccc
Confidence 448 89999888774 468999999999998754
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=150.99 Aligned_cols=151 Identities=13% Similarity=0.163 Sum_probs=111.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC-CCcch---hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~-~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+|+|+||||+|+||++++++|+++|++|++++|++ +.... +.+..+. ..+++++++|++|.+++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 36799999999999999999999999999999987 32111 1122221 245889999999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
||+|+... +.++.++++++.+. + .++||+ |+. +. .. ++.....|. .
T Consensus 82 i~~a~~~~--------------~~~~~~l~~aa~~~-g~v~~~v~-S~~-g~---~~--------~~~~~~~p~-----~ 128 (321)
T 3c1o_A 82 ISALPFPM--------------ISSQIHIINAIKAA-GNIKRFLP-SDF-GC---EE--------DRIKPLPPF-----E 128 (321)
T ss_dssp EECCCGGG--------------SGGGHHHHHHHHHH-CCCCEEEC-SCC-SS---CG--------GGCCCCHHH-----H
T ss_pred EECCCccc--------------hhhHHHHHHHHHHh-CCccEEec-ccc-cc---Cc--------cccccCCCc-----c
Confidence 99998532 45678899998887 6 789983 332 11 10 111111111 2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 163 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
..| .+|...+.+++ +.+++++++|||+++++
T Consensus 129 ~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~ 159 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIE----AAALPYTYVSANCFGAY 159 (321)
T ss_dssp HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHH
T ss_pred hHH-HHHHHHHHHHH----HcCCCeEEEEeceeccc
Confidence 458 99999988774 46899999999998775
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=175.22 Aligned_cols=172 Identities=20% Similarity=0.163 Sum_probs=126.2
Q ss_pred CCCCcEEEEECCCCh-hHHHHHHHHHHCCCeEEEEEcCCCCcc----hhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-
Q 026852 5 EGEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATVRDPNSPK----TEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~-iG~~~~~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
.+++|++|||||++| ||+++++.|+++|++|++++|+.+... .+..+++.....++..+++|++|.++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 478999999999999 999999999999999999999876411 12333444445678899999999999888743
Q ss_pred ----------CCCEEEEcccc----cc------cCCCCchhhh----hHHHHHHHHHHHHHHHhhC---Ccc---EEE-E
Q 026852 79 ----------GCDGVFHTASP----VI------FLSDNPQADI----VDPAVMGTLNVLRSCAKVH---SIK---RVV-L 127 (232)
Q Consensus 79 ----------~~d~vi~~Ag~----~~------~~~~~~~~~~----~~~n~~~~~~l~~~~~~~~---~~~---~iv-~ 127 (232)
++|++|||||. .. ..+.++++.. +++|+.+++.+++.+.+.+ +.+ .++ .
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence 46999999996 11 1234445555 8999999999999887753 111 222 2
Q ss_pred ecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh--c--CCcEEEEccCcee-CCCC
Q 026852 128 TSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--N--GIDLVAIHPGTVI-GPFF 200 (232)
Q Consensus 128 vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~--~--~i~~~~v~pg~v~-g~~~ 200 (232)
+|+..+..+. ...|+.||++...+.+.++.+ . +|++|+++||+|. |++.
T Consensus 2293 ~ss~~g~~g~------------------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~ 2346 (3089)
T 3zen_D 2293 GSPNRGMFGG------------------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLM 2346 (3089)
T ss_dssp ECSSTTSCSS------------------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTT
T ss_pred CCcccccCCC------------------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCccc
Confidence 2322111110 134999999999999999988 3 6999999999999 5543
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-19 Score=147.71 Aligned_cols=178 Identities=17% Similarity=0.100 Sum_probs=126.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCCc-chhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSP-KTEHLRELDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
.++|+||||+|+||++++..|++.|+ +|+++++++... ......++... .+.++ .|+++.+++.+++++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~~~ 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL-AGLEATDDPKVAFKD 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc-CCeEeccChHHHhCC
Confidence 36899999999999999999999986 799988764210 00111122111 11223 578777888899999
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLC 158 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 158 (232)
+|+|||+||..... .+.+.+.++.|+.++.++++++.+.. ...+++++|+...... +..++.. +.+
T Consensus 81 ~D~Vih~Ag~~~~~-~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~---------~~~~~~~--~~~- 147 (327)
T 1y7t_A 81 ADYALLVGAAPRKA-GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA---------LIAYKNA--PGL- 147 (327)
T ss_dssp CSEEEECCCCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH---------HHHHHTC--TTS-
T ss_pred CCEEEECCCcCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH---------HHHHHHc--CCC-
Confidence 99999999964322 35567899999999999999999873 3348888887632110 0000100 000
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCC
Q 026852 159 KENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 159 ~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~ 202 (232)
.+..+|+.||...+++...+++.+|+++..+||++|+||..+.
T Consensus 148 -~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~ 190 (327)
T 1y7t_A 148 -NPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST 190 (327)
T ss_dssp -CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT
T ss_pred -ChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe
Confidence 1124599999999999999998899999999999999998643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-18 Score=171.15 Aligned_cols=168 Identities=21% Similarity=0.181 Sum_probs=127.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+|++|||||+||||+++++.|+++|++ |++++|+..+... +.++++...+.++.+++||++|.++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5789999999999999999999999997 8888998765431 2333343335678899999999999988875
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCC
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
.+|+||||||.. .+.+.+.|+..+++|+.|++++.+++.+.+ ..++||++||..+..+.+.
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g------------ 2030 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG------------ 2030 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT------------
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC------------
Confidence 469999999853 346678899999999999999999888764 3479999999988766443
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 197 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g 197 (232)
...|+++|++.+.+++.... .|++...+..|.+-+
T Consensus 2031 ----------~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2031 ----------QANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCT
T ss_pred ----------cHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCC
Confidence 24599999999999986544 489988888876643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-14 Score=120.48 Aligned_cols=178 Identities=12% Similarity=-0.036 Sum_probs=120.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHH-HCCCeEEEEEcCCCCcch-----------hhhhhhcCCCCceEEEEcCCCCcchH
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPNSPKT-----------EHLRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~-~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
..+|++|||||++|||++++..|+ +.|..|+++.+..+..+. ...+.....+.....++||+++.+++
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 456999999999999999999998 679999999887653321 11123334467789999999999999
Q ss_pred HHhhc-------CCCEEEEcccccc--c------------------------CCCC----------------chhhhhHH
Q 026852 74 DSAVD-------GCDGVFHTASPVI--F------------------------LSDN----------------PQADIVDP 104 (232)
Q Consensus 74 ~~~~~-------~~d~vi~~Ag~~~--~------------------------~~~~----------------~~~~~~~~ 104 (232)
+++++ ++|++||++|... + ...+ .....|..
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~ 207 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG 207 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence 88876 5699999998321 0 0000 00112222
Q ss_pred HHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc
Q 026852 105 AVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183 (232)
Q Consensus 105 n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~ 183 (232)
..+..+.......+.+ ...++|-.|+.+.... .|. .+.+.+|..|+..|..++.++.+.
T Consensus 208 s~~s~w~~al~~a~lla~G~siva~SYiGse~t-----------------~P~---Y~~G~mG~AKaaLEa~~r~La~eL 267 (401)
T 4ggo_A 208 EDWERWIKQLSKEGLLEEGCITLAYSYIGPEAT-----------------QAL---YRKGTIGKAKEHLEATAHRLNKEN 267 (401)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG-----------------HHH---HTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhhhcccCCceEEEEeccCccee-----------------ecC---CCccHHHHHHHHHHHHHHHHHHhc
Confidence 2333333333333332 3368888888754321 111 223568999999999999999885
Q ss_pred -CCcEEEEccCceeCCCCCCC
Q 026852 184 -GIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 184 -~i~~~~v~pg~v~g~~~~~~ 203 (232)
+++++++.|+.+.|......
T Consensus 268 ~~~~a~v~v~~a~vT~AssaI 288 (401)
T 4ggo_A 268 PSIRAFVSVNKGLVTRASAVI 288 (401)
T ss_dssp TTEEEEEEECCCCCCTTGGGS
T ss_pred CCCcEEEEEcCccccchhhcC
Confidence 78999999999999876544
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=87.36 Aligned_cols=74 Identities=23% Similarity=0.343 Sum_probs=62.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.+++|+|+|+ |++|+++++.|++.| ++|++++|++++. +.+. ...+.++.+|+++.+++.++++++|+|||
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~-----~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL-----AVLN--RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH-----HHHH--TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH-----HHHH--hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3578999999 999999999999999 9999999987432 2222 23567889999999999999999999999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+++
T Consensus 76 ~~~ 78 (118)
T 3ic5_A 76 AAP 78 (118)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.3e-12 Score=105.48 Aligned_cols=83 Identities=19% Similarity=0.179 Sum_probs=66.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++||||+||+|+++++.|+++|++|++++|++++.. +..+++... .++.++.+|+++.+++.++++++|+||
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~-~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQ-AAADSVNKR-FKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHH-HTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHH-HHHHHHHhc-CCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 367899999999999999999999999999999999865332 222222111 235678899999999999999999999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
|+||.
T Consensus 194 n~ag~ 198 (287)
T 1lu9_A 194 TAGAI 198 (287)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99974
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.8e-11 Score=100.80 Aligned_cols=175 Identities=14% Similarity=0.072 Sum_probs=112.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcC----CCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRD----PNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (232)
.++|+||||+|++|++++..|+..|. +|.+++++ +++.. ....++......+ ..|++..++..++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~-g~~~dl~~~~~~~---~~~i~~~~~~~~a 80 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQ-GVMMEIDDCAFPL---LAGMTAHADPMTA 80 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHH-HHHHHHHTTTCTT---EEEEEEESSHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccch-hhHHHHhhhcccc---cCcEEEecCcHHH
Confidence 46899999999999999999999885 78888887 32111 1111122111111 1366666778889
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCCCCh
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP 155 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~ 155 (232)
++++|+|||.||.... +.....+.++.|+.++..+++.+.++. ...++|++|........-. .+. .+
T Consensus 81 l~~aD~Vi~~ag~~~~-~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~--------~~~---~~ 148 (329)
T 1b8p_A 81 FKDADVALLVGARPRG-PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA--------MKS---AP 148 (329)
T ss_dssp TTTCSEEEECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH--------HHT---CT
T ss_pred hCCCCEEEEeCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH--------HHH---cC
Confidence 9999999999985332 233456788999999999999999984 4568999988532210000 000 00
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCC
Q 026852 156 VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 156 ~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~ 200 (232)
.++.. .+++.++.-..++...+++..|+....++.-+|.|.+.
T Consensus 149 ~~p~~--~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg 191 (329)
T 1b8p_A 149 SLPAK--NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS 191 (329)
T ss_dssp TSCGG--GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred CCCHH--HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence 01111 23555555456666667777788777777666667543
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-09 Score=90.89 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=80.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCC--CceEEEEcCCCCcchHHHhhcCCCE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGAT--ERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
+.++|+||||+|++|..++..|++.| .+|++++++++ .... .++.... .++.. +.+.+++.++++++|+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~-~dL~~~~~~~~v~~----~~~t~d~~~al~gaDv 79 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVT-ADISHMDTGAVVRG----FLGQQQLEAALTGMDL 79 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHH-HHHHTSCSSCEEEE----EESHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHH-HHhhcccccceEEE----EeCCCCHHHHcCCCCE
Confidence 44789999999999999999999988 78999998775 1111 1121111 12222 2234567788999999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|||+||.... ......+.+..|+.++..+++.+.+. ..+.+|+++|-
T Consensus 80 Vi~~ag~~~~-~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 80 IIVPAGVPRK-PGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp EEECCCCCCC-SSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred EEEcCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 9999985322 12233567899999999999999998 45556666553
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-09 Score=93.39 Aligned_cols=77 Identities=22% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++++|+|+| +|++|+++++.|++.|++|++.+|++++ .+.+.....++..+++|++|.+++.++++++|+|||+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~-----a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLES-----AKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHH-----HHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHH-----HHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 457899998 7999999999999999999999998642 2222222234778899999999999999999999999
Q ss_pred ccc
Q 026852 87 ASP 89 (232)
Q Consensus 87 Ag~ 89 (232)
++.
T Consensus 76 a~~ 78 (450)
T 1ff9_A 76 IPY 78 (450)
T ss_dssp CC-
T ss_pred Ccc
Confidence 975
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=5.3e-09 Score=86.42 Aligned_cols=115 Identities=17% Similarity=0.108 Sum_probs=76.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEc--CCCCcchhh--hhhhcCCC-CceEEEEcCCCCc-chHHHhhcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVR--DPNSPKTEH--LRELDGAT-ERLHLFKANLLEE-GSFDSAVDGC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r--~~~~~~~~~--~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~~~ 80 (232)
++|+||||+|++|++++..|+..|. ++.++++ ++++..... +....... .++ ++++. +++.++++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-----~i~~~~d~l~~al~ga 75 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDA-----NIYVESDENLRIIDES 75 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCC-----EEEEEETTCGGGGTTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCe-----EEEeCCcchHHHhCCC
Confidence 3799999999999999999998875 5777887 432111101 11111111 122 22222 2366788999
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|+|||.||.... +.......++.|+.++..+++++.++ . +++|+++|-
T Consensus 76 D~Vi~~Ag~~~~-~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 76 DVVIITSGVPRK-EGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp SEEEECCSCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred CEEEECCCCCCC-CCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 999999985322 22344577999999999999999998 4 555555553
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.3e-09 Score=82.49 Aligned_cols=74 Identities=12% Similarity=0.100 Sum_probs=56.1
Q ss_pred CCCCcEEEEECC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC
Q 026852 5 EGEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68 (232)
Q Consensus 5 ~~~~~~ilItGa----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (232)
.|++|++||||| +|+||++++++|+++|++|++++|+... . . ...+. .+|++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~------~---~~g~~--~~dv~ 72 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P------T---PPFVK--RVDVM 72 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C------C---CTTEE--EEECC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c------c---CCCCe--EEccC
Confidence 478899999999 6999999999999999999999887531 1 0 11222 46787
Q ss_pred CcchHHHh----hcCCCEEEEccccc
Q 026852 69 EEGSFDSA----VDGCDGVFHTASPV 90 (232)
Q Consensus 69 ~~~~~~~~----~~~~d~vi~~Ag~~ 90 (232)
+.+++.+. +.++|++|||||..
T Consensus 73 ~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 73 TALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred cHHHHHHHHHHhcCCCCEEEECCccc
Confidence 76655444 45789999999953
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=3.6e-08 Score=71.42 Aligned_cols=102 Identities=18% Similarity=0.154 Sum_probs=70.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi 84 (232)
+++++++|+|+ |++|+.+++.|.+.|++|++++|+++. .+.+... ....+.+|.++.+.+.++ ++++|+||
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~-----~~~~~~~--~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-----VNAYASY--ATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-----HHTTTTT--CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHh--CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 45678999998 999999999999999999999987632 2222221 235678999998888776 77899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
++++. + .+.|.. +++.+.+. +.++++..++.
T Consensus 76 ~~~~~-------~----~~~~~~----~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 76 VAIGA-------N----IQASTL----TTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp ECCCS-------C----HHHHHH----HHHHHHHT-TCSEEEEECCS
T ss_pred ECCCC-------c----hHHHHH----HHHHHHHc-CCCeEEEEeCC
Confidence 98752 1 123432 34444444 55677766655
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.86 E-value=9e-09 Score=80.85 Aligned_cols=73 Identities=15% Similarity=0.254 Sum_probs=52.6
Q ss_pred CCcEEEEECC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc
Q 026852 7 EEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70 (232)
Q Consensus 7 ~~~~ilItGa----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (232)
+||+|||||| +|++|.+++++|+++|++|++++|+...... ....+.. .|+...
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--------~~~~~~~--~~v~s~ 71 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--------PHPNLSI--REITNT 71 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--------CCTTEEE--EECCSH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------CCCCeEE--EEHhHH
Confidence 5799999999 8999999999999999999999997642110 0123444 344444
Q ss_pred chH----HHhhcCCCEEEEcccc
Q 026852 71 GSF----DSAVDGCDGVFHTASP 89 (232)
Q Consensus 71 ~~~----~~~~~~~d~vi~~Ag~ 89 (232)
+++ .+.+.++|++||+||.
T Consensus 72 ~em~~~v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 72 KDLLIEMQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHHHHHHHGGGCSEEEECSBC
T ss_pred HHHHHHHHHhcCCCCEEEEcCcc
Confidence 433 3345579999999985
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.6e-08 Score=81.93 Aligned_cols=114 Identities=16% Similarity=0.028 Sum_probs=75.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEc--CCCCcchhhh--hhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVR--DPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r--~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
++|+||||+|++|++++..|+..|. ++.++++ ++++...... ........++.+.. + + .++++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 4799999999999999999999875 5777887 5432211111 11101112333332 1 2 456889999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|||+||.... ..+...+.+..|+.++..+++.+.++ ....+|+++|-
T Consensus 74 Vi~~ag~~~~-~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 74 VVITAGIPRQ-PGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp EEECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred EEEcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 9999985322 22334567899999999999999998 45556666554
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.82 E-value=4.5e-09 Score=89.90 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=63.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC---CeEEEEEcCCCCcchhhhhhhcCC-CCceEEEEcCCCCcchHHHhhcC--CCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVDG--CDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~--~d~ 82 (232)
++|+|+|| |+||+++++.|++.| .+|++.+|+.++.. ...+.+... ..++..+++|++|.+++.+++++ +|+
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~-~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQ-EIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHH-HHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHH-HHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 57999999 899999999999998 38999999976543 222222211 23688999999999999999987 899
Q ss_pred EEEcccc
Q 026852 83 VFHTASP 89 (232)
Q Consensus 83 vi~~Ag~ 89 (232)
|||+|++
T Consensus 80 Vin~ag~ 86 (405)
T 4ina_A 80 VLNIALP 86 (405)
T ss_dssp EEECSCG
T ss_pred EEECCCc
Confidence 9999975
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.4e-08 Score=88.15 Aligned_cols=78 Identities=18% Similarity=0.233 Sum_probs=61.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++++|+|+|| |++|+++++.|++. |++|++.+|++++.. .+... .++..+.+|+.|.+++.++++++|+|
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~-----~la~~-~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ-----ALAKP-SGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH-----HHHGG-GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH-----HHHHh-cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 367789999998 99999999999998 789999999875322 22111 23567789999999999999999999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
||+++.
T Consensus 93 In~tp~ 98 (467)
T 2axq_A 93 ISLIPY 98 (467)
T ss_dssp EECSCG
T ss_pred EECCch
Confidence 999975
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.68 E-value=5.1e-08 Score=70.76 Aligned_cols=74 Identities=23% Similarity=0.249 Sum_probs=58.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~ 85 (232)
++++++|+|+ |.+|+++++.|.++|++|++++++++. .+.+.. ..+.++.+|.++++.+.++ ++++|+||.
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~-----~~~~~~--~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEK-----IELLED--EGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH-----HHHHHH--TTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH-----HHHHHH--CCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 4568999998 789999999999999999999998743 222222 2367889999999988876 568999997
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+.+
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 753
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5.5e-07 Score=74.34 Aligned_cols=117 Identities=16% Similarity=0.116 Sum_probs=81.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCCCC--ceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATE--RLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++|.|+||+|++|..++..|++.| .+|.++++++. .... .++..... ++..+. ..++..++++++|+||
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a-~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVv 73 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVA-ADLSHIETRATVKGYL----GPEQLPDCLKGCDVVV 73 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHH-HHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHH-HHHhccCcCceEEEec----CCCCHHHHhCCCCEEE
Confidence 379999999999999999999888 68999999871 1111 12221111 122210 1245677889999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccce
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGA 133 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~ 133 (232)
+.||..... .+...+.+..|+.....+++.+.++....++|++|-...
T Consensus 74 i~ag~~~~~-g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 74 IPAGVPRKP-GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121 (314)
T ss_dssp ECCSCCCCT-TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHH
T ss_pred ECCCcCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcc
Confidence 999853221 233356789999999999999988865568888766533
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.8e-07 Score=68.08 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGC 80 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~ 80 (232)
|+....+++|+|.|+ |.+|..+++.|.+.|++|++++|++++. +.+.. ......+..|..+.+.+.++ ++++
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~-----~~~~~-~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF-----HRLNS-EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG-----GGSCT-TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHh-cCCCcEEEecCCCHHHHHHcCcccC
Confidence 556677889999996 9999999999999999999999987543 22221 12345677898888777765 7789
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|+||.+.+
T Consensus 86 d~Vi~~~~ 93 (155)
T 2g1u_A 86 DMVFAFTN 93 (155)
T ss_dssp SEEEECSS
T ss_pred CEEEEEeC
Confidence 99998864
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.3e-07 Score=77.35 Aligned_cols=120 Identities=8% Similarity=-0.021 Sum_probs=80.9
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhh--hhcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
.+|++++|.|+|++|++|+.++..++..|. +|+++|+++++..-...+ ...... .++.-..+..+++++
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~-------~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEG-------LNLTFTSDIKEALTD 76 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTT-------CCCEEESCHHHHHTT
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCC-------CceEEcCCHHHHhCC
Confidence 456778999999999999999999999984 899999876533211111 111111 122223456677889
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCcc-EEEEeccc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK-RVVLTSSI 131 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~vSS~ 131 (232)
+|+||.+||.-. .+.+...+.++.|+.....+.+.+.++.... .++.+|..
T Consensus 77 ADvVvitaG~p~-kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP 128 (343)
T 3fi9_A 77 AKYIVSSGGAPR-KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP 128 (343)
T ss_dssp EEEEEECCC--------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred CCEEEEccCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence 999999998421 1223345778999999999999998885445 36677655
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=79.87 Aligned_cols=77 Identities=14% Similarity=0.069 Sum_probs=58.0
Q ss_pred CCCCCC--cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 3 SGEGEE--KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 3 ~~~~~~--~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+.++++ |+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++ ++... .....+++|+.|.+++.++++++
T Consensus 9 ~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~-----~~~~~---~~~~~~~~d~~d~~~l~~~~~~~ 78 (365)
T 3abi_A 9 HHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNEN-----LEKVK---EFATPLKVDASNFDKLVEVMKEF 78 (365)
T ss_dssp -------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHH-----HHHHT---TTSEEEECCTTCHHHHHHHHTTC
T ss_pred cccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHH-----HHHHh---ccCCcEEEecCCHHHHHHHHhCC
Confidence 445554 47999999 9999999998865 6899999998643 22232 24567889999999999999999
Q ss_pred CEEEEcccc
Q 026852 81 DGVFHTASP 89 (232)
Q Consensus 81 d~vi~~Ag~ 89 (232)
|+||+++++
T Consensus 79 DvVi~~~p~ 87 (365)
T 3abi_A 79 ELVIGALPG 87 (365)
T ss_dssp SEEEECCCG
T ss_pred CEEEEecCC
Confidence 999999864
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.1e-07 Score=73.04 Aligned_cols=75 Identities=20% Similarity=0.147 Sum_probs=52.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh---hc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA---VD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~--~~ 80 (232)
-++++++||||+|+||.++++.+.+.|++|++++|++++. +.+.++ ... . ..|.++.+..+.+ .. ++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~--~~~~~~---g~~-~--~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR--EMLSRL---GVE-Y--VGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHTT---CCS-E--EEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHc---CCC-E--EeeCCcHHHHHHHHHHhCCCCC
Confidence 3678999999999999999999999999999999986432 122222 111 1 2466655443333 32 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 109 D~vi~~~g 116 (198)
T 1pqw_A 109 DVVLNSLA 116 (198)
T ss_dssp EEEEECCC
T ss_pred eEEEECCc
Confidence 99999986
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=2.3e-07 Score=77.10 Aligned_cols=118 Identities=16% Similarity=0.039 Sum_probs=80.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--e-----EEEEEcCCC--CcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--T-----VKATVRDPN--SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
++|.||||+|+||++++..|+..|. + ++++|+++. +..-...+.......-. .++...+...+.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~----~~~~~~~~~~~~~~d 79 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL----KDVIATDKEEIAFKD 79 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE----EEEEEESCHHHHTTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc----CCEEEcCCcHHHhCC
Confidence 6899999999999999999998775 4 888888652 11111221111111111 123333456678899
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCcc-EEEEeccc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK-RVVLTSSI 131 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~vSS~ 131 (232)
+|+||+.||... .+.+...+.++.|+..+..+++.+.++.... +++.+|..
T Consensus 80 aDvVvitAg~pr-kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 80 LDVAILVGSMPR-RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp CSEEEECCSCCC-CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCEEEEeCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 999999998431 2234456789999999999999999984334 67777765
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.51 E-value=3.9e-07 Score=67.08 Aligned_cols=76 Identities=17% Similarity=0.252 Sum_probs=58.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
.++++|.|+ |.+|+.+++.|.+.|++|+++++++.... +.+.... ...+.++.+|.++++.+.++ ++++|.||.+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~-~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI-KQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHH-HHHHHhh--cCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 367999996 99999999999999999999999752110 1222111 23478899999999999887 8899999977
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
.
T Consensus 79 ~ 79 (153)
T 1id1_A 79 S 79 (153)
T ss_dssp S
T ss_pred c
Confidence 5
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.49 E-value=3.7e-07 Score=65.65 Aligned_cols=73 Identities=14% Similarity=0.176 Sum_probs=55.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
+++|+|+|+ |.+|+.+++.|.+.|++|++++|+++. .+.+.. ...+.++.+|.++.+.+.+. ++++|+||++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~-----~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI-----CKKASA-EIDALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHH-HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-----HHHHHH-hcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 468999987 999999999999999999999997642 222211 01345778999888877655 6789999998
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
.
T Consensus 77 ~ 77 (140)
T 1lss_A 77 T 77 (140)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=6.2e-07 Score=74.41 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=53.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~ 80 (232)
-.+++++||||+|+||..+++.+.+.|++|++++|++++. +.++++. .. ..+|.++.+++.+.+. ++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~--~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI--AYLKQIG---FD---AAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTT---CS---EEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhcC---Cc---EEEecCCHHHHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999986432 2222221 11 2247766444444332 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 216 d~vi~~~g 223 (333)
T 1v3u_A 216 DCYFDNVG 223 (333)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999997
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=9.6e-07 Score=72.74 Aligned_cols=82 Identities=9% Similarity=0.049 Sum_probs=58.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.+++|+++|+|+ ||+|++++..|++.|+ +|+++.|+++..+. +..+++... ..+.+...++.+.+++.+.+.++|
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhcCCC
Confidence 467899999998 7999999999999998 89999999432211 122222211 112333456666777888888999
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
+|||+..
T Consensus 229 iIINaTp 235 (315)
T 3tnl_A 229 IFTNATG 235 (315)
T ss_dssp EEEECSS
T ss_pred EEEECcc
Confidence 9998864
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.2e-06 Score=73.14 Aligned_cols=75 Identities=23% Similarity=0.265 Sum_probs=54.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~ 80 (232)
-.++++||+||+|+||..+++.+...|++|++++|++++. +.+.++. .. . ..|+++.+++.+.+. ++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~--~~~~~~g---~~-~--~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE--ELFRSIG---GE-V--FIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH--HHHHHTT---CC-E--EEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH--HHHHHcC---Cc-e--EEecCccHhHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999987643 2233321 11 1 247765555544443 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 240 D~vi~~~g 247 (347)
T 2hcy_A 240 HGVINVSV 247 (347)
T ss_dssp EEEEECSS
T ss_pred CEEEECCC
Confidence 99999987
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.8e-07 Score=75.87 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=59.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+++++++|+|+ |+||+.+++.+...|++|++++|++++.. .+.+.. ... +.+|.++.+++.++++++|+||+
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~--~~~~~~--g~~---~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ--YLDDVF--GGR---VITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHT--TTS---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH--HHHHhc--Cce---EEEecCCHHHHHHHHhCCCEEEE
Confidence 56789999999 99999999999999999999999875321 122111 112 45677788889899999999999
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
+++.
T Consensus 236 ~~g~ 239 (369)
T 2eez_A 236 AVLV 239 (369)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 9873
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.31 E-value=6.4e-07 Score=72.37 Aligned_cols=75 Identities=16% Similarity=0.149 Sum_probs=51.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++|+|+ |++|+++++.|++.|++|++++|++++.. +..+++... ..+ ++.+.+++.+ .++|+||
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~-~la~~~~~~-~~~-----~~~~~~~~~~--~~~DivV 185 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAE-ELAKLFAHT-GSI-----QALSMDELEG--HEFDLII 185 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH-HHHHHTGGG-SSE-----EECCSGGGTT--CCCSEEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHhhcc-CCe-----eEecHHHhcc--CCCCEEE
Confidence 367899999998 78999999999999999999999875432 222222211 122 2223333322 5799999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
|+++.
T Consensus 186 n~t~~ 190 (271)
T 1nyt_A 186 NATSS 190 (271)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99974
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.24 E-value=8.3e-08 Score=78.25 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=51.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCC-CceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++|+++|||++ ++|+++++.|++.| +|++++|+.++.. +..+++.... ... .+++|+.+. .+.+.++|+|
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~-~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~Dil 197 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAE-ALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDII 197 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHH-HHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEE
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHH-HHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEE
Confidence 3678999999997 99999999999999 9999999865332 1222221100 000 112344332 3456689999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
||++|.
T Consensus 198 Vn~ag~ 203 (287)
T 1nvt_A 198 INATPI 203 (287)
T ss_dssp EECSCT
T ss_pred EECCCC
Confidence 999984
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-05 Score=66.22 Aligned_cols=116 Identities=12% Similarity=0.076 Sum_probs=78.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhh--hh-hcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL--RE-LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~--~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+.++|.|+|+ |.+|..++..|++.|. +|+++++++++...... .. ......++.....| .+.++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 3468999996 9999999999999986 89999997654322111 11 11111233333222 24678899
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||... .+.+...+.++.|+.....+.+.+.++.....++++|..
T Consensus 76 vVvi~ag~p~-kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 76 IVCICAGANQ-KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp EEEECCSCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred EEEEecccCC-CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 9999998421 122344567889999999999998887555667777765
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-06 Score=72.18 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=53.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh---hc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA---VD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~--~~ 80 (232)
-.+++++||||+|+||..+++.+...|++|++++|++++. +.+.++. .. .. .|.++.+..+.+ .. ++
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~--~~~~~~g---~~-~~--~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA--QSALKAG---AW-QV--INYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHcC---CC-EE--EECCCccHHHHHHHHhCCCCc
Confidence 3578999999999999999999999999999999986432 2222221 11 12 356555444333 22 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 211 D~vi~~~g 218 (327)
T 1qor_A 211 RVVYDSVG 218 (327)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999997
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2.5e-06 Score=71.01 Aligned_cols=75 Identities=24% Similarity=0.278 Sum_probs=52.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhh-hhcCCCCceEEEEcCCCCcchHHHhh-----cC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLFKANLLEEGSFDSAV-----DG 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~ 79 (232)
-.++++||+||+|+||..+++.+...|++|++++|++++. +.+. ++ +.. .. .|.++.+++.+.+ .+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~--~~~~~~~---g~~-~~--~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV--DLLKTKF---GFD-DA--FNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTS---CCS-EE--EETTSCSCSHHHHHHHCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHc---CCc-eE--EecCCHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999999986432 1222 22 111 12 3655543333332 25
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|+++|
T Consensus 226 ~d~vi~~~g 234 (345)
T 2j3h_A 226 IDIYFENVG 234 (345)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 899999986
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=71.67 Aligned_cols=75 Identities=23% Similarity=0.243 Sum_probs=53.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH---hh--cCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AV--DGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~--~~~ 80 (232)
-.+++++||||+|+||..+++.+...|++|++++|++++. +.+.++. .. .. .|.++.+..+. .. .++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~--~~~~~~g---~~-~~--~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA--ETARKLG---CH-HT--INYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHHT---CS-EE--EETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHcC---CC-EE--EECCCHHHHHHHHHHhCCCCC
Confidence 3578999999999999999999999999999999986432 2233321 11 12 35555443333 33 258
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 216 d~vi~~~g 223 (333)
T 1wly_A 216 DVVYDSIG 223 (333)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999997
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=7e-06 Score=67.91 Aligned_cols=117 Identities=14% Similarity=0.092 Sum_probs=69.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhh--hcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRE--LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.++++|.|+|+ |.+|.+++..|+..|. +++++++++++..-...+. .......+.....| .+.++++|
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD 78 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence 45679999997 9999999999999886 8999999765332111111 11101223333221 35678999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||... .+.+...+.++.|+.....+.+.+.++.....++++|..
T Consensus 79 iVvi~ag~~~-kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 79 LVVITAGAPQ-KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp EEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred EEEECCCCCC-CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 9999998421 122334567888999999999998887555667777654
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.16 E-value=3.1e-06 Score=70.80 Aligned_cols=75 Identities=20% Similarity=0.165 Sum_probs=52.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHH---Hhhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD---SAVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~--~~ 80 (232)
-.+++++|+||+|+||..+++.+...|++|++++|++++. +.+.++. .. .. .|.++.+..+ +... ++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~g---a~-~~--~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ--KIVLQNG---AH-EV--FNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTT---CS-EE--EETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHH--HHHHHcC---CC-EE--EeCCCchHHHHHHHHcCCCCc
Confidence 3578999999999999999999999999999999987533 2222221 11 12 4555544333 3333 68
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999987
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.15 E-value=3.8e-06 Score=65.40 Aligned_cols=72 Identities=19% Similarity=0.201 Sum_probs=57.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
|+|+|.|+ |.+|+++++.|.+.|++|++++++++.. +.+.. ...+.++.+|.++.+.+.++ ++++|+||-+.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~-----~~l~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC-----EEFAK-KLKATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHH-HSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHH-HcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 36999996 9999999999999999999999987432 22211 12467899999999999887 78999999664
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.14 E-value=1.4e-06 Score=70.81 Aligned_cols=79 Identities=16% Similarity=0.257 Sum_probs=54.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++|+++|+|+ ||+|++++..|++.|. +|++++|++++.. +..+++......+.+...+ .+++.+.++++|+|
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~-~la~~~~~~~~~~~i~~~~---~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQ-ALADVINNAVGREAVVGVD---ARGIEDVIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHH-HHHHHHHHHHTSCCEEEEC---STTHHHHHHHSSEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHH-HHHHHHHhhcCCceEEEcC---HHHHHHHHhcCCEE
Confidence 467899999998 8999999999999998 6999999976443 1222222111112222222 35666777889999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
||+..
T Consensus 199 InaTp 203 (283)
T 3jyo_A 199 VNATP 203 (283)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 98864
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.2e-06 Score=70.82 Aligned_cols=75 Identities=12% Similarity=0.063 Sum_probs=53.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH---hhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~--~~ 80 (232)
-.+++++|+||+|+||..+++.+...|++|++++|++++. +.++++.. . . .+|.++.+..+. ... ++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~g~---~-~--~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL--QMAEKLGA---A-A--GFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHTC---S-E--EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHcCC---c-E--EEecCChHHHHHHHHHhcCCCc
Confidence 3578999999999999999999999999999999987533 22233321 1 1 245555443333 332 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 233 d~vi~~~G 240 (354)
T 2j8z_A 233 NLILDCIG 240 (354)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999997
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.12 E-value=8.6e-06 Score=58.89 Aligned_cols=71 Identities=18% Similarity=0.152 Sum_probs=56.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
++++|.|+ |.+|..+++.|.+.|++|++++++++. .+.+.. ..+..+.+|.++++.+.++ ++++|+||-+.
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~-----~~~~~~--~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR-----VDELRE--RGVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH-----HHHHHH--TTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH-----HHHHHH--cCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 36889997 889999999999999999999999853 222222 2467889999999988775 67899998764
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.11 E-value=4.8e-06 Score=62.94 Aligned_cols=74 Identities=11% Similarity=0.084 Sum_probs=57.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh--hcCCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA--VDGCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~ 82 (232)
+.+++++|.| .|.+|..+++.|.+. |++|++++|++++. +.+.. ..+..+.+|.++.+.+.++ ++++|.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~-----~~~~~--~g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA-----QQHRS--EGRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH-----HHHHH--TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH-----HHHHH--CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 4456799998 599999999999999 99999999987432 22221 1355678999998888877 788999
Q ss_pred EEEcc
Q 026852 83 VFHTA 87 (232)
Q Consensus 83 vi~~A 87 (232)
||.+.
T Consensus 109 vi~~~ 113 (183)
T 3c85_A 109 VLLAM 113 (183)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99775
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=6.3e-06 Score=68.38 Aligned_cols=75 Identities=20% Similarity=0.209 Sum_probs=52.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhh-hhhcCCCCceEEEEcCCCCcchHHHhh----cCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHL-RELDGATERLHLFKANLLEEGSFDSAV----DGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~ 80 (232)
-++++|||+||+|+||..+++.+...|++|++++|++++. +.+ +++. .. .. .|.++.+..+.+. .++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~~g---~~-~~--~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC--RFLVEELG---FD-GA--IDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTTC---CS-EE--EETTTSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHcC---CC-EE--EECCCHHHHHHHHHhcCCCc
Confidence 3578999999999999999999999999999999987532 222 2221 11 12 3555444333322 258
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 220 d~vi~~~g 227 (336)
T 4b7c_A 220 DVFFDNVG 227 (336)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999987
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=98.07 E-value=6.2e-05 Score=62.07 Aligned_cols=114 Identities=18% Similarity=0.195 Sum_probs=72.9
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCC---CCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
.++|.|+|+ |.+|..++..|+..|. +|+++|+++++...... ++... ..++.+.. .+ .++++++|+
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~-dl~~~~~~~~~~~i~~---~~----~~a~~~aDv 77 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAM-DINHGLPFMGQMSLYA---GD----YSDVKDCDV 77 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHH-HHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHH-HHHHhHHhcCCeEEEE---CC----HHHhCCCCE
Confidence 468999998 9999999999999987 89999998765542222 22111 12232221 12 345889999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
||..+|.... +.+...+.+..|+.....+++.+.++.....++++|..
T Consensus 78 Vii~~g~p~k-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 125 (318)
T 1y6j_A 78 IVVTAGANRK-PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNP 125 (318)
T ss_dssp EEECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred EEEcCCCCCC-CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 9999984321 12234466788999999999998887444556655443
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=3.1e-05 Score=64.04 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=76.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhh--h---hcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLR--E---LDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
|+.++|.|+|| |.+|.+++..|+..|. +|+++++++++.+....+ . +.....++.. .. |. +++++
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~---d~----~a~~~ 75 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AN---DY----AAIEG 75 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES---SG----GGGTT
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eC---CH----HHHCC
Confidence 55679999998 9999999999999998 999999998654211111 1 1111122221 11 22 57789
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+|+||..||.... +.+...+.++.|......+.+.+.++.....++++|..
T Consensus 76 aDiVIiaag~p~k-~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 76 ADVVIVTAGVPRK-PGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp CSEEEECCSCCCC------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCEEEEccCcCCC-CCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 9999999984211 12233466788999999999988887555677777765
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.5e-06 Score=61.78 Aligned_cols=73 Identities=16% Similarity=0.148 Sum_probs=53.0
Q ss_pred CChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCc--chHHHhhc------CCCEEEEc
Q 026852 17 SGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEE--GSFDSAVD------GCDGVFHT 86 (232)
Q Consensus 17 ~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~------~~d~vi~~ 86 (232)
++.++.+.++.|++.|++|++..|++..... +..+.....+.++..+++|++++ +++.++++ +-|++|||
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn 104 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC 104 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3458899999999999999999887653321 11222333355678889999999 88877764 12999999
Q ss_pred ccc
Q 026852 87 ASP 89 (232)
Q Consensus 87 Ag~ 89 (232)
||.
T Consensus 105 Agg 107 (157)
T 3gxh_A 105 LAN 107 (157)
T ss_dssp SBS
T ss_pred CCC
Confidence 974
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=5.4e-06 Score=69.17 Aligned_cols=74 Identities=18% Similarity=0.194 Sum_probs=52.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch---HHHhh--cCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAV--DGC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~--~~~ 80 (232)
.++++||+||+|+||..+++.+... |++|+++++++++. +.++++. .. .. .|.++.+. +.++. .++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~--~~~~~~g---~~-~~--~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV--EAAKRAG---AD-YV--INASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH--HHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHhC---CC-EE--ecCCCccHHHHHHHHhcCCCc
Confidence 5689999999999999999999999 99999999887533 2233331 11 12 34544443 44444 368
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 242 d~vi~~~g 249 (347)
T 1jvb_A 242 DAVIDLNN 249 (347)
T ss_dssp EEEEESCC
T ss_pred eEEEECCC
Confidence 99999997
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=6.8e-06 Score=68.78 Aligned_cols=72 Identities=19% Similarity=0.156 Sum_probs=50.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhh-hcCCCCceEEEEcCCCCcchHHH---hhc-CCCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRE-LDGATERLHLFKANLLEEGSFDS---AVD-GCDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~---~~~-~~d~ 82 (232)
+++|||||+|+||..+++.+...|+ +|++++|++++. +.+.+ +. .. ..+|.++.+..+. ... ++|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~--~~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC--ILLTSELG---FD---AAINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHHTSC---CS---EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH--HHHHHHcC---Cc---eEEecCchHHHHHHHHhcCCCCCE
Confidence 8999999999999999999999999 999999986432 12221 21 11 1246655433222 222 5899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
+|+++|
T Consensus 234 vi~~~G 239 (357)
T 2zb4_A 234 YFDNVG 239 (357)
T ss_dssp EEESCC
T ss_pred EEECCC
Confidence 999997
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=98.02 E-value=6.4e-05 Score=62.03 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=77.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCC----CCceEEEEcCCCCcchHHHhhcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGA----TERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+.++|.|+|+ |.+|.+++..|+..|. +|+++++++++...... ++... .....+... .+ .++++++|
T Consensus 4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~-dL~~~~~~~~~~~~v~~t--~d----~~a~~~aD 75 (321)
T 3p7m_A 4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKAL-DLLQTCPIEGVDFKVRGT--ND----YKDLENSD 75 (321)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHH-HHHTTHHHHTCCCCEEEE--SC----GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHH-HHHhhhhhcCCCcEEEEc--CC----HHHHCCCC
Confidence 4478999995 9999999999999987 99999999865422111 11110 011112111 12 25778999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||.... +.+...+.++.|......+.+.+.++.....++++|-.
T Consensus 76 vVIi~ag~p~k-~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 124 (321)
T 3p7m_A 76 VVIVTAGVPRK-PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNP 124 (321)
T ss_dssp EEEECCSCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEEEcCCcCCC-CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 99999984321 22344567888999999999998888555577777654
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.8e-06 Score=67.62 Aligned_cols=76 Identities=20% Similarity=0.156 Sum_probs=54.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++++++|+|+ |++|++++..|++.|+ +|++++|++++.. ...+.+..... ++.+.+++.+.+.++|+|
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~-~la~~~~~~~~-------~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAE-RLVREGDERRS-------AYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHH-HHHHHSCSSSC-------CEECHHHHHHTGGGCSEE
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHhhhccC-------ceeeHHHHHhhhccCCEE
Confidence 367899999998 7899999999999998 8999999875432 12222211100 122335677778899999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|++.+.
T Consensus 209 In~t~~ 214 (297)
T 2egg_A 209 INTTSV 214 (297)
T ss_dssp EECSCT
T ss_pred EECCCC
Confidence 999863
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=8.1e-06 Score=67.11 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=54.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.+++|+++|+|+ ||+|++++..|++.|. +|+++.|++++.+. +..+++... ........+..+.+.+.+.++++|
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhccCce
Confidence 367899999998 8999999999999998 89999999442111 122222211 112223344444434456677899
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
+|||+..
T Consensus 223 iIINaTp 229 (312)
T 3t4e_A 223 ILTNGTK 229 (312)
T ss_dssp EEEECSS
T ss_pred EEEECCc
Confidence 9998764
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.1e-05 Score=62.47 Aligned_cols=116 Identities=22% Similarity=0.152 Sum_probs=78.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCC--CCcchhhhh---h--hcCCCCceEEEEcCCCCcchHHHhh
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP--NSPKTEHLR---E--LDGATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~--~~~~~~~~~---~--~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
++.++|.|.|+ |.+|..++..|++.|. +|++.++++ ++..-...+ . +.....++.. . .+ .+.+
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d----~~a~ 76 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SD----YADT 76 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SC----GGGG
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CC----HHHh
Confidence 45678999997 9999999999999999 999999984 222111111 1 1111122222 1 12 2567
Q ss_pred cCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 78 DGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 78 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+++|+||.+||.... +.+...+.++.|+.....+.+.+.++.....++++|..
T Consensus 77 ~~aDvVIiaag~p~k-pg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 77 ADSDVVVITAGIARK-PGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp TTCSEEEECCSCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCEEEEeCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 899999999984321 22345677889999999999998887555677777754
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.99 E-value=7.5e-06 Score=64.41 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=56.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
.++++|.|+ |.+|..+++.|.+.|+ |++++++++. ++.+. ..+.++.+|.++.+.+.++ ++++|.||.+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~-----~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-----KKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGH-----HHHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHH-----HHHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 457999998 8999999999999999 9999888742 22232 2478899999999999877 8899999976
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
.
T Consensus 79 ~ 79 (234)
T 2aef_A 79 L 79 (234)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.96 E-value=8.8e-05 Score=61.43 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=79.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.+.++|.|+|+ |.+|..++..|+..|. +|+++++++++......+.... .......+.. .|+ +.++++|
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----~~~~~aD 89 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----SVTANSK 89 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----GGGTTEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----HHhCCCC
Confidence 45678999998 9999999999999987 8999999865332222211111 0111122211 133 3578899
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||... .+.+...+.++.|......+.+.+.++.....++++|..
T Consensus 90 iVvi~aG~~~-kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 90 LVIITAGARQ-QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp EEEECCSCCC-CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EEEEccCCCC-CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 9999998432 223445678999999999999999888555677777765
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.3e-05 Score=66.41 Aligned_cols=75 Identities=21% Similarity=0.208 Sum_probs=52.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~ 80 (232)
-+++++||+||+|+||..+++.+...|++|+++++++++. +.++++. .. .. .|..+.+ .+.+... ++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~g---a~-~~--~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL--KIAKEYG---AE-YL--INASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTT---CS-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHcC---Cc-EE--EeCCCchHHHHHHHHhCCCCc
Confidence 3678999999999999999999999999999999987533 2233321 11 22 2443333 3333332 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 219 D~vid~~g 226 (334)
T 3qwb_A 219 DASFDSVG 226 (334)
T ss_dssp EEEEECCG
T ss_pred eEEEECCC
Confidence 99999987
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=3e-06 Score=74.67 Aligned_cols=92 Identities=18% Similarity=0.064 Sum_probs=53.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH-hhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS-AVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~v 83 (232)
.+++|+++|||| ||+|++++.+|++.|++|++++|+.++.. +..+.+. .++. ++.| +.. ....+|++
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~-~la~~~~---~~~~----~~~d---l~~~~~~~~Dil 428 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERAL-ELAEAIG---GKAL----SLTD---LDNYHPEDGMVL 428 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHH-HHHHHTT---C-CE----ETTT---TTTC--CCSEEE
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHcC---Ccee----eHHH---hhhccccCceEE
Confidence 357789999999 59999999999999999999999875432 2222221 1121 1112 222 12357999
Q ss_pred EEcccccc-------c---CCCCchhhhhHHHHHH
Q 026852 84 FHTASPVI-------F---LSDNPQADIVDPAVMG 108 (232)
Q Consensus 84 i~~Ag~~~-------~---~~~~~~~~~~~~n~~~ 108 (232)
|||+|... . ...+.+..++++|+.+
T Consensus 429 VN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p 463 (523)
T 2o7s_A 429 ANTTSMGMQPNVEETPISKDALKHYALVFDAVYTP 463 (523)
T ss_dssp EECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSS
T ss_pred EECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCC
Confidence 99998421 1 1123345667777654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00028 Score=58.50 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=74.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhh--hh-hc--CCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHL--RE-LD--GATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~--~~-~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.++|.|.|| |.+|..++..|++.|+ +|++.++++++.+.... .. .. ....++.. ..++.++++++|
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~aD 80 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGAD 80 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCCC
Confidence 358999998 9999999999999998 99999999764432111 11 10 11122221 234555788999
Q ss_pred EEEEcccccccCCCC----chhhhhHHHHHHHHHHHHHHHhhCCccEEEEecc
Q 026852 82 GVFHTASPVIFLSDN----PQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS 130 (232)
+||..+|.......+ .....+..|+.....+++.+.++.....++++|-
T Consensus 81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 999999743211110 2345577788888888888888744344444443
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1e-05 Score=66.80 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=52.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch---HHHhhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~ 80 (232)
-++++++|+||+|++|..+++.+...|++|+++++++++. +.+.++. .. +. .|.++.+. +.+... ++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~G---a~-~~--~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA--AHAKALG---AW-ET--IDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHcC---CC-EE--EeCCCccHHHHHHHHhCCCCc
Confidence 3578999999999999999999999999999999987543 2233332 11 22 24444333 333332 68
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 211 Dvvid~~g 218 (325)
T 3jyn_A 211 PVVYDGVG 218 (325)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999987
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=9.2e-05 Score=60.33 Aligned_cols=115 Identities=11% Similarity=0.042 Sum_probs=77.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhh---hhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLR---ELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|+|.|+|| |.+|.+++..|++.|. +|.+.++++++.+....+ ..........+... +| .++++++|+|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence 47999999 9999999999999987 899999988643211111 11101111222111 12 4677899999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|..||.... +.+...+.++.|......+.+.+.++.....++++|..
T Consensus 74 Viaag~~~k-pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 74 VVTAGLARK-PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp EECCCCCCC-SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred EECCCCCCC-CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 999984321 22345577888999999999998888555677777765
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.3e-05 Score=66.55 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=52.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch---HHHhhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~ 80 (232)
-++++|+|+||+|+||..+++.+...|++|+++++++++. +.+.++.. . +. .|.++.+. +.+... ++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~lga---~-~~--~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT--EELLRLGA---A-YV--IDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH--HHHHHHTC---S-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhCCC---c-EE--EeCCcccHHHHHHHHhCCCCC
Confidence 3578999999999999999999998999999999988754 23333321 1 22 24444332 333332 68
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 215 Dvvid~~g 222 (340)
T 3gms_A 215 DAAIDSIG 222 (340)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999987
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.7e-05 Score=66.30 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=52.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh----cCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV----DGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~d 81 (232)
-.+++|+|+||+|+||..+++.+...|++|++++|++++. +.+.++.. . .. .|.++.+..+.+. .++|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~lGa---~-~~--~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC--EACERLGA---K-RG--INYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHHTC---S-EE--EETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhcCC---C-EE--EeCCchHHHHHHHHHhCCCce
Confidence 3578999999999999999999999999999999987543 22333321 1 22 3444433332222 2689
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|+++|
T Consensus 238 vvid~~g 244 (353)
T 4dup_A 238 IILDMIG 244 (353)
T ss_dssp EEEESCC
T ss_pred EEEECCC
Confidence 9999987
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.4e-05 Score=66.50 Aligned_cols=74 Identities=18% Similarity=0.133 Sum_probs=52.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d 81 (232)
.++++||+||+|++|..+++.+...|++|++++|++++. +.+.++. .. .. .|.++.+ .+.+..+ ++|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~--~~~~~~g---a~-~~--~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL--RRAKALG---AD-ET--VNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHHT---CS-EE--EETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhcC---CC-EE--EcCCcccHHHHHHHHhCCCCce
Confidence 578999999999999999999999999999999987533 2222321 11 12 3555443 2333332 689
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|+++|
T Consensus 238 ~vi~~~g 244 (343)
T 2eih_A 238 KVVDHTG 244 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999997
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.3e-06 Score=65.36 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=49.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
++|+|+||+|.+|.++++.|++.|++|++++|++++... ..+.... .+. ..|+. .+++.++++++|+||++..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~---~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KAAEYRR---IAG--DASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HHHHHHH---HHS--SCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhcc---ccc--cCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 368999999999999999999999999999998653221 1111110 000 01222 2456667788999999863
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00027 Score=58.01 Aligned_cols=117 Identities=16% Similarity=0.100 Sum_probs=78.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-C--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-G--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++|.|+||+|.+|.+++..|.+. + .+++++++++ +..-...+ +............ .+ +...+.++++|+||-
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~D-l~~~~~~~~v~~~-~~--~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVD-LSHIPTAVKIKGF-SG--EDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHH-HHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHH-hhCCCCCceEEEe-cC--CCcHHHhCCCCEEEE
Confidence 47999999999999999998875 5 4789999887 32212222 2221122222111 01 223467889999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
.||..- .+.+...+.++.|......+.+.+.++.....++++|-.
T Consensus 76 ~ag~~r-kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 120 (312)
T 3hhp_A 76 SAGVAR-KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (312)
T ss_dssp CCSCSC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred eCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 998432 223445678899999999999999888555677777654
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=1.2e-05 Score=64.98 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=50.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++|+|+ |++|++++..|++.|++|++++|++++.. +..+.+... ..+.. .|+ +++.+ .++|+||
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~-~l~~~~~~~-~~~~~--~~~---~~~~~--~~~DivI 185 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTK-ELAERFQPY-GNIQA--VSM---DSIPL--QTYDLVI 185 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHH-HHHHHHGGG-SCEEE--EEG---GGCCC--SCCSEEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHcccc-CCeEE--eeH---HHhcc--CCCCEEE
Confidence 367899999998 78999999999999999999999975432 222222211 12222 222 22211 3799999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
|+++.
T Consensus 186 n~t~~ 190 (272)
T 1p77_A 186 NATSA 190 (272)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99864
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1.2e-05 Score=67.65 Aligned_cols=76 Identities=20% Similarity=0.185 Sum_probs=54.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+++++++|+|+ |++|+.+++.+...|++|++++|++++.+ .+.+... ..+.. +..+.+++.+.+.++|+||+
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~--~~~~~~~--~~~~~---~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS--YLETLFG--SRVEL---LYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHHG--GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH--HHHHhhC--ceeEe---eeCCHHHHHHHHcCCCEEEE
Confidence 45689999999 99999999999999999999999875432 1222111 11211 22345567777789999999
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
+++.
T Consensus 237 ~~~~ 240 (361)
T 1pjc_A 237 AVLV 240 (361)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9863
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=4e-05 Score=62.73 Aligned_cols=72 Identities=22% Similarity=0.176 Sum_probs=45.8
Q ss_pred CCCcE-EEEECCC------------------ChhHHHHHHHHHHCCCeEEEEEcCCCCcchh-h------hhhhc---CC
Q 026852 6 GEEKV-VCVTGAS------------------GFVASWLVKLLLQRGYTVKATVRDPNSPKTE-H------LRELD---GA 56 (232)
Q Consensus 6 ~~~~~-ilItGa~------------------g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~------~~~~~---~~ 56 (232)
+.||+ ||||+|. |-+|.+++++++++|++|+++.+..+..... . ++.+. ..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~ 113 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA 113 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence 45666 9999776 4599999999999999999999865422110 0 11000 01
Q ss_pred CCceEEEEcCCCCcchHHHhh
Q 026852 57 TERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 57 ~~~~~~~~~D~~~~~~~~~~~ 77 (232)
...+..+..|+...+++.+++
T Consensus 114 ~~~~~~i~v~v~sa~~m~~av 134 (313)
T 1p9o_A 114 LSGLLSLEAEENALPGFAEAL 134 (313)
T ss_dssp CCSEEEEEEETTTSTTHHHHH
T ss_pred ccccceeeeccccHHHHHHHH
Confidence 233456677777666655544
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00012 Score=60.13 Aligned_cols=115 Identities=13% Similarity=0.046 Sum_probs=75.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhh--h-cCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRE--L-DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|+|.|+|+ |.+|..++..|++.|. +|+++++++++..-...+. . .....+......| + .+.++++|+|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC 73 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence 47999997 9999999999999886 8999999986533211111 0 0001122222111 2 2567889999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|.+||.... +.+...+.++.|......+.+.+.++.....++++|..
T Consensus 74 ii~ag~~~k-pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 120 (314)
T 3nep_X 74 IITAGLPRS-PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP 120 (314)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSS
T ss_pred EECCCCCCC-CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCc
Confidence 999985321 22334577889999999999998887555677777765
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.4e-05 Score=65.11 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=52.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhhc--CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVD--GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~ 82 (232)
-.+++|||+||+|+||..+++.+...|++|+++++++++. +.+.++.. -..+..+ .+ .+.+.+... ++|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~ga----~~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT--EFVKSVGA----DIVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHTC----SEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhcCC----cEEecCc-hhHHHHHHHHhCCCCceE
Confidence 3578999999999999999999999999999999987643 23333321 1233333 22 123333333 5899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
+|+++|
T Consensus 231 vid~~g 236 (342)
T 4eye_A 231 VVDPIG 236 (342)
T ss_dssp EEESCC
T ss_pred EEECCc
Confidence 999987
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.82 E-value=2.8e-05 Score=63.46 Aligned_cols=73 Identities=22% Similarity=0.165 Sum_probs=51.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+++++|+||+|++|..+++.+...|++|++++|++++.+ .+.++.. . +. .|..+.+++.+.++++|++|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~~ga---~-~~--~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA--LPLALGA---E-EA--ATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH--HHHHTTC---S-EE--EEGGGHHHHHHHTTSEEEEEE-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHhcCC---C-EE--EECCcchhHHHHhcCceEEEE-
Confidence 5689999999999999999999999999999999876542 2333311 1 12 244331334444478999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+|
T Consensus 196 ~g 197 (302)
T 1iz0_A 196 VR 197 (302)
T ss_dssp CS
T ss_pred CC
Confidence 86
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00037 Score=57.95 Aligned_cols=121 Identities=18% Similarity=0.068 Sum_probs=76.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-------eEEEEEcCCCCcchh--hhhhhcCC-CCceEEEEcCCCCcchHH
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPKTE--HLRELDGA-TERLHLFKANLLEEGSFD 74 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-------~V~~~~r~~~~~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~ 74 (232)
+++.-+|.|+||+|+||..++..|++... ++.++|.++.....+ ..+..... ......+. .....
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-----~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-----TADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-----ESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-----cCChH
Confidence 35556899999999999999998887642 678888765321111 11111111 11111111 12345
Q ss_pred HhhcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEeccc
Q 026852 75 SAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSI 131 (232)
Q Consensus 75 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~ 131 (232)
++++++|+||-.||.-- .+.+..++.++.|......+.+.+.++. +..+++.+|..
T Consensus 96 ~a~~~advVvi~aG~pr-kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR-KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp HHTTTCSEEEECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred HHhCCCCEEEECCCCCC-CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 77899999999998432 2234557889999999999999988863 33455666654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.80 E-value=4.2e-05 Score=61.69 Aligned_cols=73 Identities=23% Similarity=0.218 Sum_probs=50.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++|+++|+|+ ||+|++++..|++.|. +|++++|++++.. +..+++.. ..+..+ +. +++.. .++|+|
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~-~la~~~~~--~~~~~~--~~---~~l~~--~~~Div 185 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKAL-ALRNELDH--SRLRIS--RY---EALEG--QSFDIV 185 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHH-HHHHHHCC--TTEEEE--CS---GGGTT--CCCSEE
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhcc--CCeeEe--eH---HHhcc--cCCCEE
Confidence 367899999998 7999999999999996 8999999875432 22233322 223332 22 22222 678999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
||+..
T Consensus 186 InaTp 190 (272)
T 3pwz_A 186 VNATS 190 (272)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 98864
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.79 E-value=5.9e-06 Score=60.01 Aligned_cols=69 Identities=16% Similarity=0.251 Sum_probs=50.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+++++|.|+ |++|+.+++.|.+.|++|++.+|++++.. ...+++. . ++...+++.++++++|+||.+.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~-~~a~~~~-----~-----~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVR-AFAEKYE-----Y-----EYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHH-HHHHHHT-----C-----EEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHH-HHHHHhC-----C-----ceEeecCHHHHhcCCCEEEEeC
Confidence 689999997 99999999999999999999999875432 1122221 1 1122345667788999999887
Q ss_pred c
Q 026852 88 S 88 (232)
Q Consensus 88 g 88 (232)
+
T Consensus 89 ~ 89 (144)
T 3oj0_A 89 S 89 (144)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=1.9e-05 Score=63.79 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=51.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++|+++|+|+ ||+|++++..|++.|+ +|+++.|++++.. ++.. .+.. ...+++.++++++|+||
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~-----~la~---~~~~-----~~~~~~~~~~~~aDiVI 180 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN-----NWSL---NINK-----INLSHAESHLDEFDIII 180 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT-----TCCS---CCEE-----ECHHHHHHTGGGCSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-----HHHH---hccc-----ccHhhHHHHhcCCCEEE
Confidence 56889999997 7999999999999998 8999999985432 1211 1211 13456667788899999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
|+..
T Consensus 181 naTp 184 (277)
T 3don_A 181 NTTP 184 (277)
T ss_dssp ECCC
T ss_pred ECcc
Confidence 8863
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00014 Score=61.01 Aligned_cols=119 Identities=11% Similarity=0.051 Sum_probs=77.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-----eEEEEEcCCCCcch----hhhhhhcCCC-CceEEEEcCCCCcchHHHh
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-----TVKATVRDPNSPKT----EHLRELDGAT-ERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-----~V~~~~r~~~~~~~----~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~ 76 (232)
+..+|.|+||+|.||.+++-.|+..+. .+.+.+.+.+.... ...+ +.... .-..- ..+. ..-.+.
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amD-L~h~~~p~~~~--v~i~--~~~y~~ 105 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME-LEDSLYPLLRE--VSIG--IDPYEV 105 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEE--EEEE--SCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHh-HHhhhhhhcCC--cEEe--cCCHHH
Confidence 346899999999999999999998763 27776665433211 1221 21111 11111 1121 234578
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhh-CCccEEEEeccc
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV-HSIKRVVLTSSI 131 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~iv~vSS~ 131 (232)
++++|+||-.||.-- .+.+...+.++.|......+.+.+.++ .....++.+|..
T Consensus 106 ~~daDvVVitag~pr-kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 106 FEDVDWALLIGAKPR-GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp TTTCSEEEECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 889999999998421 223455688999999999999888876 445677777765
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00032 Score=57.75 Aligned_cols=116 Identities=12% Similarity=0.069 Sum_probs=75.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhh---hhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL---RELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+.++|.|+|| |.+|..++..|+..|. +|.++++++++...... +.......++.+.. | + .++++++|
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aD 76 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDAD 76 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCC
Confidence 4468999999 9999999999998884 89999988643321111 11111112333332 1 2 45578999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||.... +.+...+.+..|+.....+.+.+.++.....++++|-.
T Consensus 77 vVvi~ag~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 125 (317)
T 3d0o_A 77 LVVICAGAAQK-PGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNP 125 (317)
T ss_dssp EEEECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred EEEECCCCCCC-CCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 99999985322 12334566788888888888888887555566665544
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00038 Score=57.09 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=69.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcC------CCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDG------ATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
++|.|+|| |.+|..++..|+..|+ +|+++++++++.+.... ++.. ...++... .+. +.++++|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~-dl~~~~~~~~~~~~i~~t-------~d~-~a~~~aD 72 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKAL-DLYEASPIEGFDVRVTGT-------NNY-ADTANSD 72 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHH-HHHTTHHHHTCCCCEEEE-------SCG-GGGTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHH-hHHHhHhhcCCCeEEEEC-------CCH-HHHCCCC
Confidence 58999999 9999999999999996 89999998754432111 1111 11222211 223 4578999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS 130 (232)
+||..+|.-.. +.....+.+..|+.....+.+.+.+.. ...++.+.|
T Consensus 73 ~Vi~a~g~p~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 119 (309)
T 1ur5_A 73 VIVVTSGAPRK-PGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVN 119 (309)
T ss_dssp EEEECCCC---------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred EEEEcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence 99999974221 111223556778888888888888874 444444433
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=3.5e-05 Score=64.67 Aligned_cols=74 Identities=23% Similarity=0.274 Sum_probs=50.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhh-cCCCE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAV-DGCDG 82 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~-~~~d~ 82 (232)
.++++||+||+|++|..+++.+...|++|++++|++++. +.+.++. .. ..+ |..+.+ .+.+.. .++|+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~--~~~~~~G---a~-~~~--~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS--AFLKSLG---CD-RPI--NYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTT---CS-EEE--ETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHcC---Cc-EEE--ecCChhHHHHHHHhcCCCCCE
Confidence 568999999999999999999999999999999986432 2232221 11 222 333322 222222 25899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
+|+++|
T Consensus 235 vid~~g 240 (362)
T 2c0c_A 235 VYESVG 240 (362)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 999986
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=3.9e-05 Score=64.78 Aligned_cols=75 Identities=20% Similarity=0.124 Sum_probs=55.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+.+++++|+|+ |+||+.+++.+...|++|++++|++++.. .+++.. ...+ ..+..+.+++.++++++|+||+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~--~~~~~~--g~~~---~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLR--QLDAEF--CGRI---HTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHT--TTSS---EEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH--HHHHhc--CCee---EeccCCHHHHHHHHcCCCEEEE
Confidence 67899999999 99999999999999999999999875321 122211 1111 1233456677788889999999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+++
T Consensus 238 ~~~ 240 (377)
T 2vhw_A 238 AVL 240 (377)
T ss_dssp CCC
T ss_pred CCC
Confidence 876
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00027 Score=57.46 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=76.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhh---hcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRE---LDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|||-|+|| |+||..++..|+.++. ++.++|.++++..-.+++. ............. .|+ +.++++|+|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~----~~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCH----HHhCCCCEE
Confidence 47889996 9999999999988874 7999998864332222221 1111111222211 123 357789999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|-.||..- .+.+...+.++.|......+.+.+.++.....++.+|-.
T Consensus 74 vitAG~pr-kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP 120 (294)
T 2x0j_A 74 VVTAGLAR-KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp EECCCCCC-CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred EEecCCCC-CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence 99999432 223456788999999999999999888555666666665
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00035 Score=57.74 Aligned_cols=115 Identities=14% Similarity=0.002 Sum_probs=77.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhh---hhhcCC-CCceEEEEcCCCCcchHHHhhcCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL---RELDGA-TERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~---~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
..++|.|+|+ |.+|..++..|+..|. +|+++++++++...... +..... ..++.. .. |++ .++++
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~---d~~----~~~da 90 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GK---DYS----VSAGS 90 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ES---SSC----SCSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cC---CHH----HhCCC
Confidence 3478999999 9999999999999986 89999997754322111 111111 112211 22 232 26789
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|+||-.||... .+.+...+.+..|......+.+.+.++.....++++|..
T Consensus 91 DiVIitaG~p~-kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 91 KLVVITAGARQ-QEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp SEEEECCSCCC-CSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CEEEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 99999998532 122344577889999999999998888555667777754
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00094 Score=55.06 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=72.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhh--hhh---cCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHL--REL---DGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~--~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
++|.|.|| |.+|..++..|+..|+ +|+++++++++...... +.. .....++.. ..+. ++++++|+
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-------t~d~-~al~~aD~ 75 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-------SNTY-DDLAGADV 75 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-------ECCG-GGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-------CCCH-HHhCCCCE
Confidence 68999998 9999999999999998 89999998764432111 111 011122221 1223 56789999
Q ss_pred EEEcccccccCCCC----chhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 83 VFHTASPVIFLSDN----PQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 83 vi~~Ag~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
||..+|........ .-.+.+..|+.....+++.+.+......++++|-.
T Consensus 76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 128 (322)
T 1t2d_A 76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNP 128 (322)
T ss_dssp EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 99999742211111 02355677888888888887777544455555443
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.69 E-value=5.2e-05 Score=63.19 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=50.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhh--cCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAV--DGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~~d~v 83 (232)
++++|+||+|+||...++.+...|++|+++++++++. +.+.++.. . +. .|..+.+ .+.++. .++|++
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~~Ga---~-~~--~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI--ALLKDIGA---A-HV--LNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH--HHHHHHTC---S-EE--EETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHcCC---C-EE--EECCcHHHHHHHHHHhcCCCCcEE
Confidence 7899999999999999999999999999999987643 22333321 1 22 2333332 233332 279999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|+++|
T Consensus 238 id~~g 242 (349)
T 3pi7_A 238 LDAVT 242 (349)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99986
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00031 Score=58.09 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=75.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcC---CCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+.++|.|+|| |.+|..++..|+..+. +++++|+++++...... ++.. ...++.+.. | + .++++++|
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~-dl~~~~~~~~~~~i~~-~--~----~~a~~~aD 78 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAI-DLSNALPFTSPKKIYS-A--E----YSDAKDAD 78 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHH-HHHTTGGGSCCCEEEE-C--C----GGGGGGCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHH-HHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence 3468999999 9999999999988875 79999997654322111 1111 112333332 1 2 35578999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||.... +.+...+.+..|+.....+.+.+.++.....++++|-.
T Consensus 79 vVii~ag~~~k-~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 127 (326)
T 2zqz_A 79 LVVITAGAPQK-PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp EEEECCCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred EEEEcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 99999985321 12334566788888888888888887555677777654
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00013 Score=61.32 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=54.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+.+|+|+|+ |+||..+++.+...|++|+++++++++.. ...+++. .. +. .|..+.+.+.++..++|+||++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~~~~lG---a~-~v--~~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKE-EALKNFG---AD-SF--LVSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHH-HHHHTSC---CS-EE--EETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhcC---Cc-eE--EeccCHHHHHHhhCCCCEEEEC
Confidence 6789999996 99999999999999999999999875432 1111221 11 22 3555666777777789999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+|
T Consensus 259 ~g 260 (366)
T 1yqd_A 259 VS 260 (366)
T ss_dssp CS
T ss_pred CC
Confidence 87
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00031 Score=57.90 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=73.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhh--hhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++|.|+|| |.+|..++..|+..+. ++.++|+++++......+ .......++.+.. | + .++++++|+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV 76 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 368999999 9999999999998875 899999976543321111 1111112333332 1 2 3558899999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|..||.... +.+...+.+..|+.....+.+.+.++.....++++|-.
T Consensus 77 ii~ag~~~~-~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 123 (318)
T 1ez4_A 77 VITAGAPQK-PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP 123 (318)
T ss_dssp EECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred EECCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 999985321 11223456788999999999988887555677777554
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.67 E-value=6.6e-05 Score=60.79 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=49.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++|+++|+|+ ||+|++++..|++.|+ +|++++|++++.. +..+++... ..+..... +++ .+++|+|
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~-~la~~~~~~-~~~~~~~~-----~~l---~~~aDiI 191 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAE-QLAELVAAY-GEVKAQAF-----EQL---KQSYDVI 191 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHH-HHHHHHGGG-SCEEEEEG-----GGC---CSCEEEE
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHH-HHHHHhhcc-CCeeEeeH-----HHh---cCCCCEE
Confidence 367899999998 7999999999999996 8999999875432 222223221 12333322 121 1578999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
||+..
T Consensus 192 InaTp 196 (281)
T 3o8q_A 192 INSTS 196 (281)
T ss_dssp EECSC
T ss_pred EEcCc
Confidence 98764
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00067 Score=55.81 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=73.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhh---hhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL---RELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+.++|.|+|+ |.+|..++..|+..|. +|+++++++++...... +.......+..+.. | + .++++++|
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD 76 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD 76 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence 3468999999 9999999999988774 89999998753221111 11111111333332 1 2 24578999
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||.+++..... .....+.+..|......+++.+.++.....++++|-.
T Consensus 77 vViia~~~~~~~-g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNP 125 (316)
T 1ldn_A 77 LVVICAGANQKP-GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNP 125 (316)
T ss_dssp EEEECCSCCCCT-TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred EEEEcCCCCCCC-CCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 999999753221 1223456778888888888888777444455555543
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00039 Score=56.89 Aligned_cols=113 Identities=19% Similarity=0.184 Sum_probs=68.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCC---CCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|.|| |.+|..++..|+..|+ +|+++++++++...... ++... .....+.. .+. +.++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~-~l~~~~~~~~~~~i~~---~~~----~a~~~aDvV 71 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAE-DIAHAAPVSHGTRVWH---GGH----SELADAQVV 71 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHH-HHTTSCCTTSCCEEEE---ECG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHH-hhhhhhhhcCCeEEEE---CCH----HHhCCCCEE
Confidence 47999998 9999999999999998 99999998643321111 11111 11222221 122 457889999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|.+++.... +.+...+.+..|+.....+++.+.++.....++++|-.
T Consensus 72 Ii~~~~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP 118 (304)
T 2v6b_A 72 ILTAGANQK-PGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNP 118 (304)
T ss_dssp EECC-------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSS
T ss_pred EEcCCCCCC-CCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 999974221 11223456788999888888888887434455555443
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0014 Score=54.22 Aligned_cols=113 Identities=18% Similarity=0.148 Sum_probs=71.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhh--hhh-hc--CCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEH--LRE-LD--GATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~--~~~-~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
++|.|.|| |.+|..++..|++.|+ +|++.+++++..+... +.. .. ....++... .+. ++++++|+
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-------~d~-~al~~aD~ 85 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-------NNY-EYLQNSDV 85 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-------SCG-GGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-------CCH-HHHCCCCE
Confidence 58999998 9999999999999998 9999999976443211 111 10 111223221 223 56789999
Q ss_pred EEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 83 VFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 83 vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
||-.+|..... ...-.+.+..|+.....+++.+.+......++++|-.
T Consensus 86 VI~avg~p~k~-g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 133 (328)
T 2hjr_A 86 VIITAGVPRKP-NMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNP 133 (328)
T ss_dssp EEECCSCCCCT-TCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEEcCCCCCCC-CCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 99998742111 1112245667888888888887776444455555443
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=6.1e-05 Score=63.24 Aligned_cols=72 Identities=17% Similarity=0.191 Sum_probs=49.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC---CCcchhhhhhhcCCCCceEEEEcCCCC--cchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---NSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~ 80 (232)
+++++|+|+|| |++|..+++.+...|++|+++++++ ++. +.+.++. ...+ | .+ .+.+.+.-.++
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~--~~~~~~g-----a~~v--~-~~~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ--TVIEETK-----TNYY--N-SSNGYDKLKDSVGKF 247 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH--HHHHHHT-----CEEE--E-CTTCSHHHHHHHCCE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH--HHHHHhC-----Ccee--c-hHHHHHHHHHhCCCC
Confidence 34889999999 9999999999999999999999987 432 2222221 2222 4 33 12232211468
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|+||+++|
T Consensus 248 d~vid~~g 255 (366)
T 2cdc_A 248 DVIIDATG 255 (366)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0011 Score=54.46 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=71.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhh---h--hcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLR---E--LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~---~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.++|.|.|+ |.+|..++..|++.|+ +|++.+++++.......+ . ......++... .+. ++++++|
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-------~d~-~a~~~aD 74 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-------DDY-ADISGSD 74 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-------SCG-GGGTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-------CCH-HHhCCCC
Confidence 368999998 9999999999999998 999999987543321111 0 00011122211 123 4578899
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||.++|.-.. ......+.+..|......+++.+.+......++++|..
T Consensus 75 iVi~avg~p~~-~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp 123 (317)
T 2ewd_A 75 VVIITASIPGR-PKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123 (317)
T ss_dssp EEEECCCCSSC-CSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred EEEEeCCCCCC-CCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 99999974221 11223345566777777788877776444455555554
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.59 E-value=6.5e-05 Score=59.77 Aligned_cols=80 Identities=18% Similarity=0.122 Sum_probs=54.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chh-hhhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTE-HLRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~--~~~~~~~~~~ 64 (232)
+++++|+|.|+ |++|+++++.|++.|. ++++++++.-.. ..+ ..+.+. ....++..+.
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 35678999996 6899999999999997 888898876211 111 111221 1123456666
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.+++ .+.+.++++++|+||.+.
T Consensus 108 ~~~~-~~~~~~~~~~~DvVi~~~ 129 (249)
T 1jw9_B 108 ALLD-DAELAALIAEHDLVLDCT 129 (249)
T ss_dssp SCCC-HHHHHHHHHTSSEEEECC
T ss_pred ccCC-HhHHHHHHhCCCEEEEeC
Confidence 6665 345677788999999774
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00091 Score=54.67 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=71.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+.++|.|.|| |.+|..++..++..|. +|++.|++++ ......+.......+++.. .| . +.++++|+||
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t----~d---~-~~l~~aD~Vi 82 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEIS----KD---L-SASAHSKVVI 82 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEEE----SC---G-GGGTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEe----CC---H-HHHCCCCEEE
Confidence 3468999996 8899999999999998 8999999875 2212221111111244431 22 2 4578999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
..+|.- .+.+...+.+..|+.....+++.+.++.....++++|-.
T Consensus 83 ~aag~~--~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP 127 (303)
T 2i6t_A 83 FTVNSL--GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP 127 (303)
T ss_dssp ECCCC------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSS
T ss_pred EcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCh
Confidence 999862 222344566777888888888887776444455555554
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.57 E-value=8.8e-05 Score=61.57 Aligned_cols=73 Identities=23% Similarity=0.206 Sum_probs=50.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhcCCCEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVDGCDGV 83 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~d~v 83 (232)
.+++|||+|| |++|..+++.+...|++|++++|++++. +.+.++. .. .. .|.++.+ .+.++..++|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~lG---a~-~~--~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL--ELAKELG---AD-LV--VNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH--HHHHHTT---CS-EE--ECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHCC---CC-EE--ecCCCccHHHHHHHHhCCCCEE
Confidence 5689999999 7899999999999999999999887533 2222221 11 12 4555433 232323578999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|+++|
T Consensus 235 id~~g 239 (339)
T 1rjw_A 235 VVTAV 239 (339)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99986
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.57 E-value=9.8e-05 Score=63.65 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=34.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
-.+++|+|+||+|+||...++.+...|++|+++++++++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~ 257 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK 257 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 467899999999999999999999999999999887643
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0015 Score=53.51 Aligned_cols=112 Identities=14% Similarity=0.031 Sum_probs=72.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcC------CCCceEEEEcCCCCcchHHHhhcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDG------ATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
++|.|.|+ |.+|..++..|++. |++|+++++++++.+.... .+.. ...++... +|. .. ++++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~-~l~~~~~~~~~~~~i~~t----~d~---~~-l~~a 70 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKAL-DMYESGPVGLFDTKVTGS----NDY---AD-TANS 70 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHH-HHHTTHHHHTCCCEEEEE----SCG---GG-GTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHH-hHHhhhhcccCCcEEEEC----CCH---HH-HCCC
Confidence 37899998 99999999999985 7899999999764332111 1111 01112111 222 23 6789
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|+||-+++... .......+.++.|+.....+++.+.++.....++.++..
T Consensus 71 DvViiav~~p~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP 120 (310)
T 1guz_A 71 DIVIITAGLPR-KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 (310)
T ss_dssp SEEEECCSCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSS
T ss_pred CEEEEeCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCc
Confidence 99999986321 112223466778888888888888887545566666544
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00033 Score=59.05 Aligned_cols=73 Identities=14% Similarity=0.196 Sum_probs=57.0
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
...+.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++...... . .-.++..|..|.+.+.++.+++|+
T Consensus 7 ~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~----~-----ad~~~~~~~~d~~~l~~~~~~~dv 76 (377)
T 3orq_A 7 NKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY----V-----AHEFIQAKYDDEKALNQLGQKCDV 76 (377)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG----G-----SSEEEECCTTCHHHHHHHHHHCSE
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh----h-----CCEEEECCCCCHHHHHHHHHhCCc
Confidence 34567899999986 5689999999999999999998876533211 1 114667899999999999999998
Q ss_pred EEE
Q 026852 83 VFH 85 (232)
Q Consensus 83 vi~ 85 (232)
|..
T Consensus 77 i~~ 79 (377)
T 3orq_A 77 ITY 79 (377)
T ss_dssp EEE
T ss_pred cee
Confidence 754
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00073 Score=55.43 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=75.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhcCC---CCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|+|| |.+|..++..|+..+ .+++++|+++++.+.... ++... ..++.+.. + + .++++++|+|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~-dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V 71 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAE-DILHATPFAHPVWVWA-G--S----YGDLEGARAV 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHH-HHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHH-HHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 47999998 999999999999887 589999998654322111 11111 12333332 1 2 3557899999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|..||.... +.....+.+..|......+.+.+.++.....++++|-.
T Consensus 72 ii~ag~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (310)
T 2xxj_A 72 VLAAGVAQR-PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118 (310)
T ss_dssp EECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EECCCCCCC-CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 999985322 12234466788888888888888887555677777654
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00014 Score=62.95 Aligned_cols=38 Identities=32% Similarity=0.160 Sum_probs=35.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++.||+++|||++ +||+++++.|.+.|++|++++|++.
T Consensus 262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~ 299 (488)
T 3ond_A 262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPI 299 (488)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4789999999987 9999999999999999999998864
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00036 Score=58.66 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=49.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--cCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--DGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~v 83 (232)
-.+.+|+|+||+|++|...++.+...|++|+++++ +++. +.++++. .. .. .|..+.+..+.+. .++|++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~--~~~~~lG---a~-~v--~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDAS--ELVRKLG---AD-DV--IDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGH--HHHHHTT---CS-EE--EETTSSCHHHHHHTSCCBSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHH--HHHHHcC---CC-EE--EECCchHHHHHHhhcCCCCEE
Confidence 36789999999999999999999999999998873 3321 2333332 11 22 2444433333332 468999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|+++|
T Consensus 253 id~~g 257 (375)
T 2vn8_A 253 LDNVG 257 (375)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99987
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00026 Score=57.08 Aligned_cols=77 Identities=25% Similarity=0.283 Sum_probs=45.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEE-EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++.++|.|+|++|.+|+.+++.+.+. |+++++ ++++++...-....++.... ..++...+++.++++++|+|
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~------~~~v~~~~dl~~~l~~~DvV 76 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG------KTGVTVQSSLDAVKDDFDVF 76 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS------CCSCCEESCSTTTTTSCSEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC------cCCceecCCHHHHhcCCCEE
Confidence 34578999999999999999998865 778774 45554321101111111100 01222233344556689999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|+++.
T Consensus 77 IDft~ 81 (273)
T 1dih_A 77 IDFTR 81 (273)
T ss_dssp EECSC
T ss_pred EEcCC
Confidence 98874
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00016 Score=60.14 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=48.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d 81 (232)
.+++|||+||+|++|..+++.+...|++|+++ +++++. +.++++. . .. .| .+.+ .+.+... ++|
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~--~~~~~lG---a--~~--i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL--EYVRDLG---A--TP--ID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH--HHHHHHT---S--EE--EE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH--HHHHHcC---C--CE--ec-cCCCHHHHHHHHhcCCCce
Confidence 57899999999999999999999999999998 665432 2233332 1 12 23 2222 2333332 689
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|+++|
T Consensus 219 ~vid~~g 225 (343)
T 3gaz_A 219 LVYDTLG 225 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999986
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00018 Score=61.39 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=57.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
++|+|.|. |.+|..+++.|.+.|+.|++++++++. ++.+.. ..+..+.+|.++.+.+.++ ++++|+||-+.
T Consensus 5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~-----v~~~~~--~g~~vi~GDat~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDH-----IETLRK--FGMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHH-----HHHHHH--TTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH-----HHHHHh--CCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence 46999997 779999999999999999999999853 222222 2356788999999999887 88899998765
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00026 Score=56.41 Aligned_cols=68 Identities=29% Similarity=0.357 Sum_probs=49.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++ +++|.|+ |++|++++..|++.|+ +|++++|++++ .+++.. .+... ..+++.+.++++|+||
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~k-----a~~la~---~~~~~-----~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIER-----AKALDF---PVKIF-----SLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHH-----HHTCCS---SCEEE-----EGGGHHHHHHTCSEEE
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH-----HHHHHH---HcccC-----CHHHHHhhhcCCCEEE
Confidence 466 8999997 8899999999999998 89999998743 223322 11111 2355667788899999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
++..
T Consensus 172 natp 175 (253)
T 3u62_A 172 NTTS 175 (253)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 8763
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00017 Score=61.44 Aligned_cols=71 Identities=24% Similarity=0.239 Sum_probs=52.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+.+++++|.|+ |+||..+++.|...|+ +|++++|++++.. +..+++. ... .+.+++.+++.++|+||
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~-~la~~~g-----~~~-----~~~~~l~~~l~~aDvVi 232 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDLG-----GEA-----VRFDELVDHLARSDVVV 232 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHHT-----CEE-----CCGGGHHHHHHTCSEEE
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHcC-----Cce-----ecHHhHHHHhcCCCEEE
Confidence 67899999998 9999999999999998 8999999875321 1122221 111 12345677778999999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.+.+
T Consensus 233 ~at~ 236 (404)
T 1gpj_A 233 SATA 236 (404)
T ss_dssp ECCS
T ss_pred EccC
Confidence 9875
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00017 Score=62.54 Aligned_cols=72 Identities=19% Similarity=0.262 Sum_probs=57.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
.|+|+|.|+ |-+|+.+++.|.++|++|++++++++. ++.+.. .-.+..+.+|.++++-+.++ ++++|.+|-.
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~-----~~~~~~-~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDR-----LRELQD-KYDLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHH-----HHHHHH-HSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH-----HHHHHH-hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 478999998 569999999999999999999998743 332221 12467889999999999988 7889998843
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00022 Score=57.30 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=34.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK 46 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~ 46 (232)
+++++|.|+ ||+|++++..|++.|.+|+++.|++++..
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~ 155 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLD 155 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 689999997 89999999999999999999999987653
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00054 Score=57.05 Aligned_cols=73 Identities=21% Similarity=0.107 Sum_probs=49.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC----cchHHHhh-----
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE----EGSFDSAV----- 77 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~----- 77 (232)
.+.+|||+|+ |++|...++.+...|++|+++++++++. +.++++. .. +.+ |.++ .+.+.+..
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~lG---a~-~~~--~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL--EVAKNCG---AD-VTL--VVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHTT---CS-EEE--ECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH--HHHHHhC---CC-EEE--cCcccccHHHHHHHHhccccC
Confidence 5679999997 8999999999988999999998887532 2233322 11 222 3332 23444444
Q ss_pred cCCCEEEEccc
Q 026852 78 DGCDGVFHTAS 88 (232)
Q Consensus 78 ~~~d~vi~~Ag 88 (232)
.++|++|+++|
T Consensus 239 ~g~D~vid~~g 249 (352)
T 1e3j_A 239 DLPNVTIDCSG 249 (352)
T ss_dssp SCCSEEEECSC
T ss_pred CCCCEEEECCC
Confidence 36999999986
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00029 Score=60.25 Aligned_cols=73 Identities=19% Similarity=0.216 Sum_probs=56.7
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
++.+.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++..... ... -..+..|..|.+.+.++.+++|+
T Consensus 30 ~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~----~~a-----d~~~~~~~~d~~~l~~~a~~~D~ 99 (419)
T 4e4t_A 30 SPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG----AVA-----DRHLRAAYDDEAALAELAGLCEA 99 (419)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH----HHS-----SEEECCCTTCHHHHHHHHHHCSE
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh----hhC-----CEEEECCcCCHHHHHHHHhcCCE
Confidence 34578899999986 579999999999999999999876653221 111 13556888999999999999999
Q ss_pred EEE
Q 026852 83 VFH 85 (232)
Q Consensus 83 vi~ 85 (232)
|+.
T Consensus 100 V~~ 102 (419)
T 4e4t_A 100 VST 102 (419)
T ss_dssp EEE
T ss_pred EEE
Confidence 883
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0004 Score=56.16 Aligned_cols=64 Identities=20% Similarity=0.282 Sum_probs=46.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++|.|.|++|.+|.++++.|.+.|++|++.+|+++... .+.+. + + +..+ ..++++++|+||.+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~--~~~~~---g--~-----~~~~---~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRD--RLQGM---G--I-----PLTD---GDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHH--HHHHT---T--C-----CCCC---SSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHH--HHHhc---C--C-----CcCC---HHHHhcCCCEEEEcC
Confidence 58999999999999999999999999999998864321 12211 1 1 1222 234567899999775
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00037 Score=58.24 Aligned_cols=74 Identities=20% Similarity=0.143 Sum_probs=51.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc-chHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi~ 85 (232)
.+.+|||+|+ |++|...++.+...|++|+++++++++.+ .+.++.. . +. .|..+. +..+.+..++|+||.
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~--~~~~lGa---~-~v--~~~~~~~~~~~~~~~~~D~vid 249 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE--DAMKMGA---D-HY--IATLEEGDWGEKYFDTFDLIVV 249 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH--HHHHHTC---S-EE--EEGGGTSCHHHHSCSCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHcCC---C-EE--EcCcCchHHHHHhhcCCCEEEE
Confidence 5689999999 99999999998888999999999887542 2333321 1 22 233333 333333357899999
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
++|.
T Consensus 250 ~~g~ 253 (360)
T 1piw_A 250 CASS 253 (360)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9873
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00021 Score=59.43 Aligned_cols=74 Identities=22% Similarity=0.209 Sum_probs=50.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC--cchHHHhh-cCCCEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAV-DGCDGV 83 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-~~~d~v 83 (232)
++.+|+|+||+|++|...++.+...|++|+++++++++. +.+.++.. -+.+ |..+ .+.+.+.- .++|++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~lGa----~~vi--~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI--EWTKKMGA----DIVL--NHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH--HHHHHHTC----SEEE--CTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhcCC----cEEE--ECCccHHHHHHHhCCCCccEE
Confidence 578999999999999999999999999999999876532 23333321 1222 2222 12233331 258999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|+++|
T Consensus 222 ~d~~g 226 (346)
T 3fbg_A 222 FCTFN 226 (346)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99986
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0014 Score=53.76 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=73.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhh-----cCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLREL-----DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+|.|+|| |.+|..++..++..|. +|++.++++++......+.. .....++... .| . ++++++|+|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~d---~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS----NS---Y-EDMRGSDIV 71 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SC---G-GGGTTCSEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC----CC---H-HHhCCCCEE
Confidence 4889999 9999999999998887 69999998764432111110 1111122211 22 2 467899999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|..||.... +.+...+.+..|+.....+++.+.++.....++++|-.
T Consensus 72 i~~ag~~~k-~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (308)
T 2d4a_B 72 LVTAGIGRK-PGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118 (308)
T ss_dssp EECCSCCCC-SSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEeCCCCCC-CCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 999885321 12233466788888888888888887545567776654
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00031 Score=60.68 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=34.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
-.+.+|+|+||+|++|...++.+...|++|+++++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~ 265 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQK 265 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 467899999999999999999999999999999887643
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00029 Score=56.99 Aligned_cols=67 Identities=15% Similarity=0.259 Sum_probs=47.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++++++|.|+ ||.|++++..|.+.|+ +|+++.|++++. +++.. .+..+ ..+++.+ + ++|+||
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka-----~~La~---~~~~~-----~~~~l~~-l-~~DivI 183 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKT-----SEIYG---EFKVI-----SYDELSN-L-KGDVII 183 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHH-----HHHCT---TSEEE-----EHHHHTT-C-CCSEEE
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-----HHHHH---hcCcc-----cHHHHHh-c-cCCEEE
Confidence 57899999998 6899999999999998 899999997532 22222 12211 1233333 4 799999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
|+..
T Consensus 184 naTp 187 (282)
T 3fbt_A 184 NCTP 187 (282)
T ss_dssp ECSS
T ss_pred ECCc
Confidence 8863
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0019 Score=53.08 Aligned_cols=114 Identities=16% Similarity=0.157 Sum_probs=70.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhh--hhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++|.|.|+ |.+|..++..|++.|+ +|++++|+++....... ...........+.. ++. +.++++|+||
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi 72 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI 72 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence 36899998 9999999999999998 99999998643321110 10000001112211 232 3467899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
.+++.... ......+.+..|+.....+++.+.+......+|++|..
T Consensus 73 iav~~~~~-~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp 118 (319)
T 1a5z_A 73 VAAGVPQK-PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP 118 (319)
T ss_dssp ECCCCCCC-SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EccCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 98864221 11223455677888888888888776444455555443
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00028 Score=58.11 Aligned_cols=71 Identities=27% Similarity=0.339 Sum_probs=46.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc--chHHHhh-cCCCEEEEc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE--GSFDSAV-DGCDGVFHT 86 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~-~~~d~vi~~ 86 (232)
+++|+||+|++|...++.+...|++|+++++++++. +.++++.. . +.+ |..+. +.+.++- .++|++|++
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~--~~~~~lGa---~-~~i--~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH--DYLRVLGA---K-EVL--AREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH--HHHHHTTC---S-EEE--ECC---------CCSCCEEEEEEC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHcCC---c-EEE--ecCCcHHHHHHHhcCCcccEEEEC
Confidence 799999999999999999999999999999987654 23333321 1 222 33332 1222221 257999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+|
T Consensus 224 ~g 225 (328)
T 1xa0_A 224 VG 225 (328)
T ss_dssp ST
T ss_pred Cc
Confidence 86
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0002 Score=58.85 Aligned_cols=74 Identities=24% Similarity=0.276 Sum_probs=53.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
-.+.+++|+||+|++|...++.+...|++|++++++.+ .+.++++.. . +. .|..+.+.+.+.++++|++|.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~---~~~~~~lGa---~-~~--i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN---HAFLKALGA---E-QC--INYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH---HHHHHHHTC---S-EE--EETTTSCHHHHCCSCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch---HHHHHHcCC---C-EE--EeCCCcchhhhhccCCCEEEE
Confidence 35789999999999999999999999999998875432 133333322 1 12 344554446666788999999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
++|
T Consensus 222 ~~g 224 (321)
T 3tqh_A 222 LVG 224 (321)
T ss_dssp SSC
T ss_pred CCC
Confidence 986
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00091 Score=54.50 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.+++++|.|+ |.||+.+++.|...|++|++.+|++++. +.+.+. .+..+ +.+++.++++++|+|
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~--~~~~~~-----g~~~~-----~~~~l~~~l~~aDvV 219 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL--ARITEM-----GLVPF-----HTDELKEHVKDIDIC 219 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TCEEE-----EGGGHHHHSTTCSEE
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHC-----CCeEE-----chhhHHHHhhCCCEE
Confidence 3578899999996 8899999999999999999999987422 111111 12222 235677888999999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.+..
T Consensus 220 i~~~p 224 (300)
T 2rir_A 220 INTIP 224 (300)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 98874
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0029 Score=51.80 Aligned_cols=112 Identities=20% Similarity=0.131 Sum_probs=68.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhh--h-hcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLR--E-LDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~--~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|.|+ |.+|..++..|++.|+ +|++++|+++.......+ . ... .....+... ++. +.++++|+|
T Consensus 8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~--~~~----~~~~~aD~V 79 (319)
T 1lld_A 8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-YPTVSIDGS--DDP----EICRDADMV 79 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-STTCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhh-cCCeEEEeC--CCH----HHhCCCCEE
Confidence 68999998 9999999999999998 999999986432211111 1 110 011222111 122 346789999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEec
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vS 129 (232)
|-+++... ...+...+.+..|+.....+++.+.+......++.++
T Consensus 80 ii~v~~~~-~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~ 124 (319)
T 1lld_A 80 VITAGPRQ-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 124 (319)
T ss_dssp EECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 99986321 1223345667778887777887777663233444443
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00061 Score=56.90 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=52.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhh-hhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.+.+|+|+|+ |++|...++.+...|++|+++++++++.. .+. ++.. . +. .|..+.+.+.++..++|++|.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~--~~~~~lGa--~--~v--i~~~~~~~~~~~~~g~D~vid 250 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKRE--EALQDLGA--D--DY--VIGSDQAKMSELADSLDYVID 250 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHH--HHHTTSCC--S--CE--EETTCHHHHHHSTTTEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH--HHHHHcCC--c--ee--eccccHHHHHHhcCCCCEEEE
Confidence 5789999996 99999999988888999999999875431 122 2211 1 12 234455566666668999999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
++|
T Consensus 251 ~~g 253 (357)
T 2cf5_A 251 TVP 253 (357)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0013 Score=55.61 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=55.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.+|+|+|.|++. +|+.+++.+.+.|++|++++.++...... . .-..+..|..|.+.+.++.+++|+|
T Consensus 10 ~~~~~k~IlIlG~G~-~g~~la~aa~~~G~~vi~~d~~~~~~~~~----~-----ad~~~~~~~~d~~~l~~~~~~~dvI 79 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQ-LGRMMALAAKEMGYKIAVLDPTKNSPCAQ----V-----ADIEIVASYDDLKAIQHLAEISDVV 79 (389)
T ss_dssp CCCTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSTTCTTTT----T-----CSEEEECCTTCHHHHHHHHHTCSEE
T ss_pred cCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCCCCchHH----h-----CCceEecCcCCHHHHHHHHHhCCEe
Confidence 346889999998764 99999999999999999998876432211 1 1134567888999999999999987
Q ss_pred EE
Q 026852 84 FH 85 (232)
Q Consensus 84 i~ 85 (232)
..
T Consensus 80 ~~ 81 (389)
T 3q2o_A 80 TY 81 (389)
T ss_dssp EE
T ss_pred ee
Confidence 43
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00036 Score=56.23 Aligned_cols=70 Identities=23% Similarity=0.224 Sum_probs=49.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+++++++|.|+ |++|+++++.|.+.|++|++.+|++++ .+.+.... .+.. .+ ++.++++++|+||+
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~-----~~~l~~~~-g~~~-----~~--~~~~~~~~aDiVi~ 192 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEK-----AIKLAQKF-PLEV-----VN--SPEEVIDKVQVIVN 192 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHH-----HHHHTTTS-CEEE-----CS--CGGGTGGGCSEEEE
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHH-----HHHHHHHc-CCee-----eh--hHHhhhcCCCEEEE
Confidence 56789999996 789999999999999999999998643 22222111 1221 11 34456678999998
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
+...
T Consensus 193 atp~ 196 (275)
T 2hk9_A 193 TTSV 196 (275)
T ss_dssp CSST
T ss_pred eCCC
Confidence 8753
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00024 Score=59.16 Aligned_cols=73 Identities=21% Similarity=0.189 Sum_probs=49.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--CC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--GC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~ 80 (232)
.+.+|||+|+ |++|..+++.+...|+ +|++++|++++. +.+.++.. -+. .|..+.+ .+.++.. ++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~--~~~~~~Ga----~~~--~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR--ELAKKVGA----DYV--INPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH--HHHHHHTC----SEE--ECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHhCC----CEE--ECCCCcCHHHHHHHHcCCCCC
Confidence 6789999999 9999999999999999 999999986432 22333321 112 3444333 2333322 58
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 238 D~vid~~g 245 (348)
T 2d8a_A 238 DVFLEFSG 245 (348)
T ss_dssp EEEEECSC
T ss_pred CEEEECCC
Confidence 99999986
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00092 Score=51.73 Aligned_cols=65 Identities=23% Similarity=0.243 Sum_probs=47.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+++|.|.| +|.+|.++++.|.+.|++|++.+|++++ .+.+... .+... +..++++++|+||.+.
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~--g~~~~--------~~~~~~~~~DvVi~av 91 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKR-----TARLFPS--AAQVT--------FQEEAVSSPEVIFVAV 91 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHH-----HHHHSBT--TSEEE--------EHHHHTTSCSEEEECS
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHc--CCcee--------cHHHHHhCCCEEEECC
Confidence 46799999 8999999999999999999999998642 2222221 22221 4556778899999876
Q ss_pred c
Q 026852 88 S 88 (232)
Q Consensus 88 g 88 (232)
.
T Consensus 92 ~ 92 (215)
T 2vns_A 92 F 92 (215)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00045 Score=57.44 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=49.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+.+|||+|+ |++|...++.+...|++|+++++++++.+ .++++. .. +.+ ++.+.+.+ ++|++|.+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~--~~~~lG---a~-~v~----~~~~~~~~---~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ--DALSMG---VK-HFY----TDPKQCKE---ELDFIIST 241 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH--HHHHTT---CS-EEE----SSGGGCCS---CEEEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH--HHHhcC---CC-eec----CCHHHHhc---CCCEEEEC
Confidence 5789999997 99999999999999999999999887542 333332 11 222 34443332 78999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+|
T Consensus 242 ~g 243 (348)
T 3two_A 242 IP 243 (348)
T ss_dssp CC
T ss_pred CC
Confidence 86
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00034 Score=56.56 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=31.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
++|.|.|+ |.+|..+++.|++.|++|++.+|+++..
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL 40 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 67888876 7899999999999999999999987543
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00058 Score=57.33 Aligned_cols=73 Identities=21% Similarity=0.214 Sum_probs=51.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+.+|||+|+ |++|...++.+...|++|+++++++++. +.+.++.. . +. .|..+.+.+.++..++|+||.+
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~--~~a~~lGa--~--~v--i~~~~~~~~~~~~~g~Dvvid~ 264 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR--EAAKALGA--D--EV--VNSRNADEMAAHLKSFDFILNT 264 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHTC--S--EE--EETTCHHHHHTTTTCEEEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHcCC--c--EE--eccccHHHHHHhhcCCCEEEEC
Confidence 5678999998 8899999999988999999999987643 22333321 1 22 3444544444444678999999
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
+|
T Consensus 265 ~g 266 (369)
T 1uuf_A 265 VA 266 (369)
T ss_dssp CS
T ss_pred CC
Confidence 86
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0011 Score=56.12 Aligned_cols=39 Identities=21% Similarity=0.077 Sum_probs=34.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
+.+++++|+|+ |.+|+.+++.+...|++|++++|++.+.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46789999996 8999999999999999999999988654
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.001 Score=56.58 Aligned_cols=75 Identities=17% Similarity=0.149 Sum_probs=55.6
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
|+.||++++|+|.|++ .+|+.+++.+.+.|++|++++ ++.....+ .. .....+..|..|.+.+.++.+++|
T Consensus 18 ~~~mm~~~~I~ilGgG-~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~----~a---d~~~~~~~~~~d~~~l~~~a~~~d 88 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGG-QLGRMLVESANRLNIQVNVLD-ADNSPAKQ----IS---AHDGHVTGSFKEREAVRQLAKTCD 88 (403)
T ss_dssp ---CCSCCEEEEECCS-HHHHHHHHHHHHHTCEEEEEE-STTCTTGG----GC---CSSCCEESCTTCHHHHHHHHTTCS
T ss_pred eccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEE-CCCCcHHH----hc---cccceeecCCCCHHHHHHHHHhCC
Confidence 4556778999999975 799999999999999999999 65432211 11 112356688999999999999999
Q ss_pred EEEE
Q 026852 82 GVFH 85 (232)
Q Consensus 82 ~vi~ 85 (232)
+|+-
T Consensus 89 ~i~~ 92 (403)
T 3k5i_A 89 VVTA 92 (403)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0008 Score=55.70 Aligned_cols=74 Identities=22% Similarity=0.241 Sum_probs=49.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch---HHHhhcCCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAVDGCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~d~ 82 (232)
-.+.++||+|+ |++|...++.+...|++|+++++++++. +.++++. .. +. .|..+.+. +.+...++|.
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~lG---a~-~~--i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKL--NLARRLG---AE-VA--VNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHTT---CS-EE--EETTTSCHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHHcC---CC-EE--EeCCCcCHHHHHHHhCCCCCE
Confidence 35789999997 8899999999999999999999987543 2233332 11 22 23333332 2222237899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
+|.++|
T Consensus 236 vid~~g 241 (340)
T 3s2e_A 236 VLVTAV 241 (340)
T ss_dssp EEESSC
T ss_pred EEEeCC
Confidence 998875
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0014 Score=53.25 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=52.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+++++|.|+ |.||+.+++.|...|++|++.+|++++. +...+. .+..+ +.+++.++++++|+|+
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~--~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi 218 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL--ARIAEM-----GMEPF-----HISKAAQELRDVDVCI 218 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHC-----CCeec-----ChhhHHHHhcCCCEEE
Confidence 478899999995 8899999999999999999999987432 111111 12221 2356778889999999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.+..
T Consensus 219 ~~~p 222 (293)
T 3d4o_A 219 NTIP 222 (293)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 8863
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.001 Score=55.55 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=51.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh----hc--C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA----VD--G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~--~ 79 (232)
.+.+|||+|+ |++|...++.+...|++ |+++++++++. +.++++ . ..+..+..|-.+.+++.+. .. +
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL--KFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH--HHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHh-c--hhcccccccccchHHHHHHHHHHhCCCC
Confidence 5678999998 99999999999999997 88898887543 333444 2 2333344443344443333 22 6
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.++|
T Consensus 253 ~Dvvid~~g 261 (363)
T 3m6i_A 253 PAVALECTG 261 (363)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 899999986
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0086 Score=50.04 Aligned_cols=39 Identities=15% Similarity=0.080 Sum_probs=32.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
|+++++|.|.| .|.+|..+++.|++.|++|++.+|++++
T Consensus 19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~ 57 (358)
T 4e21_A 19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNA 57 (358)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 35567899998 6899999999999999999999998753
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0015 Score=52.63 Aligned_cols=58 Identities=22% Similarity=0.177 Sum_probs=48.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.||+++|.|+++-+|+.++..|++.|+.|+++.|+. ..+.+.++++|+|
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIV 207 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------KDLSLYTRQADLI 207 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHTTCSEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEE
Confidence 357899999999999999999999999999999886543 2345677889999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|...|.
T Consensus 208 I~Avg~ 213 (285)
T 3p2o_A 208 IVAAGC 213 (285)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 988873
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0012 Score=54.74 Aligned_cols=71 Identities=23% Similarity=0.274 Sum_probs=48.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-----cCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~ 80 (232)
.+.+|||+|| |++|..+++.+...|+ +|+++++++++. +.+.++ . -+. .|..+. ++.+.+ .++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~--~~~~~l-a----~~v--~~~~~~-~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL--AFARPY-A----DRL--VNPLEE-DLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH--GGGTTT-C----SEE--ECTTTS-CHHHHHHHHHSSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHh-H----Hhc--cCcCcc-CHHHHHHHhcCCCC
Confidence 6789999999 9999999999999999 999999886432 122222 1 112 344432 222222 268
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|+++|
T Consensus 233 D~vid~~g 240 (343)
T 2dq4_A 233 EVLLEFSG 240 (343)
T ss_dssp EEEEECSC
T ss_pred CEEEECCC
Confidence 99999986
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0042 Score=50.76 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=68.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhh--h-hhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHL--R-ELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~--~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|.|.| +|.+|..++..|++.| ++|++.+|++++...... . ........+.... +|. +.++++|+|
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~----~~~~~aDvV 73 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW----AALADADVV 73 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG----GGGTTCSEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH----HHhCCCCEE
Confidence 4799999 7999999999999999 799999998753321111 1 0000111223222 222 456789999
Q ss_pred EEccccccc---CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecc
Q 026852 84 FHTASPVIF---LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130 (232)
Q Consensus 84 i~~Ag~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS 130 (232)
|-+++.... .+.......+..|+.....+++.+.+......+++++-
T Consensus 74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 123 (309)
T 1hyh_A 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISN 123 (309)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 998864221 01122345667788888888888777643345555443
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00035 Score=57.87 Aligned_cols=69 Identities=10% Similarity=0.050 Sum_probs=56.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
++++|.|+ |.+|+.+++.|.+.|+ |++++++++. .+ +.. ..+.++.+|.+|++.+.++ ++++|.+|-+.
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~-----~~-~~~--~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-----KK-VLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGH-----HH-HHH--TTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhh-----hh-HHh--CCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 47999997 8999999999999999 9999888743 22 221 3578999999999999888 88899998664
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0041 Score=53.61 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=31.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++|.|.|+ |.+|..++..|++.|++|++++|++++
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~ 37 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNK 37 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence 47888875 999999999999999999999998753
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00083 Score=56.20 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=50.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhhc--CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVD--GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~ 82 (232)
-.+.+|||+| +|++|...++.+...|++|+++++++++. +.++++.. -+.+..+-.+ .+.+.++.. ++|+
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~lGa----~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKL--DRAFALGA----DHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHHTC----SEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhH--HHHHHcCC----CEEEcCCcccHHHHHHHHhCCCCceE
Confidence 3568999999 89999999999999999999999887543 22333321 1222211111 123333333 6899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
||.++|
T Consensus 261 vid~~g 266 (363)
T 3uog_A 261 ILEIAG 266 (363)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 999987
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0013 Score=53.31 Aligned_cols=80 Identities=19% Similarity=0.191 Sum_probs=54.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCC----------------cch----hhhhhhcCCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS----------------PKT----EHLRELDGATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~----------------~~~----~~~~~~~~~~~~~~~~~ 64 (232)
+++.+|+|.|+ ||+|+++++.|++.|. ++.++|.+.-. .+. +.+.++ +..-+++.+.
T Consensus 34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~ 111 (292)
T 3h8v_A 34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHN 111 (292)
T ss_dssp GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-CTTSEEEEEC
T ss_pred HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEec
Confidence 56678999987 5699999999999995 78888765411 111 111222 2245667777
Q ss_pred cCCCCcchHHHhh-----------cCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAV-----------DGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~-----------~~~d~vi~~A 87 (232)
.++++.+.+..++ +++|+||.+.
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~ 145 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV 145 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence 7887666666654 5899999764
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00026 Score=58.37 Aligned_cols=36 Identities=39% Similarity=0.520 Sum_probs=33.0
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
+|+|+||+|++|...++.+...|++|+++++++++.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~ 188 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 188 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 799999999999999999998999999999987654
|
| >1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0014 Score=56.87 Aligned_cols=118 Identities=14% Similarity=0.030 Sum_probs=72.5
Q ss_pred CcEEEEECCCC-hhHHHHHHHHHHC----CCeEEEEEcCCCCcch--hhhhhh-cCC--CCceEEEEcCCCCcchHHHhh
Q 026852 8 EKVVCVTGASG-FVASWLVKLLLQR----GYTVKATVRDPNSPKT--EHLREL-DGA--TERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 8 ~~~ilItGa~g-~iG~~~~~~l~~~----g~~V~~~~r~~~~~~~--~~~~~~-~~~--~~~~~~~~~D~~~~~~~~~~~ 77 (232)
.++|.|.||++ |.|.+++..|++. +.+|++.++++++... +..... ... ..++.. ..+..+++
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~-------ttD~~eal 75 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-------TMNLDDVI 75 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-------ESCHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEE-------ECCHHHHh
Confidence 36899999999 8899999888854 7899999998864332 111111 111 122222 23455678
Q ss_pred cCCCEEEEcccccc--------------cCCC--Cc---------hhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccc
Q 026852 78 DGCDGVFHTASPVI--------------FLSD--NP---------QADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132 (232)
Q Consensus 78 ~~~d~vi~~Ag~~~--------------~~~~--~~---------~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~ 132 (232)
+++|+||..++... .... ++ ---...-|+.....+++.+.+.....-++++|-..
T Consensus 76 ~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 155 (480)
T 1obb_A 76 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPI 155 (480)
T ss_dssp TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCH
T ss_pred CCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 89999999996310 0100 00 00124467778888888888875555666666553
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00098 Score=54.71 Aligned_cols=82 Identities=20% Similarity=0.054 Sum_probs=56.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+++++|.|++.-+|+.+++.|++.|++|++++|+..+... ..+.+... .........++.+++.+.+.++|+||
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~-ra~~la~~--~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT-RGESLKLN--KHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE-SCCCSSCC--CCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh-HHHHHhhh--cccccccccccHhHHHHHhccCCEEE
Confidence 5789999999999999999999999999999999887432211 11111110 01111111133477888999999999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
...|.
T Consensus 251 sAtg~ 255 (320)
T 1edz_A 251 TGVPS 255 (320)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 88873
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0008 Score=56.57 Aligned_cols=75 Identities=15% Similarity=0.176 Sum_probs=53.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCC------------------
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL------------------ 67 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------ 67 (232)
..+.+|+|.|+ |.+|..+++.+...|++|++++|++.+.. .++++. .+++..|+
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~--~~~~lG-----a~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAE--QVRSVG-----AQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHH--HHHHTT-----CEECCCC-------------CHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHcC-----CeEEeccccccccccchhhhhHHHHh
Confidence 35679999999 78999999999999999999999986432 222221 12322211
Q ss_pred CCcchHHHhhcCCCEEEEccc
Q 026852 68 LEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 68 ~~~~~~~~~~~~~d~vi~~Ag 88 (232)
.+.+.+.++++++|+||.++.
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~ 274 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTAL 274 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCC
T ss_pred hhHHHHHHHHhcCCEEEECCC
Confidence 124567788899999998763
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0021 Score=52.06 Aligned_cols=57 Identities=21% Similarity=0.152 Sum_probs=47.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchH--HHhhcCCCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSF--DSAVDGCDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~d~ 82 (232)
.++|++++|.|+++-+|+.++..|++.|++|+++.|... .+ .+.++++|+
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~----------------------------~l~l~~~~~~ADI 213 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS----------------------------TEDMIDYLRTADI 213 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC----------------------------HHHHHHHHHTCSE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC----------------------------CchhhhhhccCCE
Confidence 478999999999999999999999999999999876432 22 367788999
Q ss_pred EEEcccc
Q 026852 83 VFHTASP 89 (232)
Q Consensus 83 vi~~Ag~ 89 (232)
||...|.
T Consensus 214 VI~Avg~ 220 (300)
T 4a26_A 214 VIAAMGQ 220 (300)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9988874
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0011 Score=55.39 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=50.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc--chHHHhhc--CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE--GSFDSAVD--GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~--~~d 81 (232)
.+.+|||+|| |++|...++.+... |++|+++++++++. +.++++. . -+. .|..+. +.+.++-. ++|
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~--~~~~~lG---a-~~v--i~~~~~~~~~v~~~~~g~g~D 256 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL--KLAERLG---A-DHV--VDARRDPVKQVMELTRGRGVN 256 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH--HHHHHTT---C-SEE--EETTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH--HHHHHhC---C-CEE--EeccchHHHHHHHHhCCCCCc
Confidence 5689999999 89999999999888 99999999887532 2233332 1 122 234433 34444433 589
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|.++|
T Consensus 257 vvid~~G 263 (359)
T 1h2b_A 257 VAMDFVG 263 (359)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999986
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0025 Score=53.48 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=49.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc-CCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD-GCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~-~~d 81 (232)
-.+.+|+|+||+|++|...++.+...|++|+++. ++++. +.++++.. -+.+ |..+.+ .+.++.. ++|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~--~~~~~lGa----~~vi--~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNF--DLAKSRGA----EEVF--DYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH--HHHHHTTC----SEEE--ETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH--HHHHHcCC----cEEE--ECCCchHHHHHHHHccCCcc
Confidence 4678999999999999999999999999999886 44322 33333321 1232 333332 3333332 589
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|.++|
T Consensus 234 ~v~d~~g 240 (371)
T 3gqv_A 234 YALDCIT 240 (371)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999986
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0019 Score=54.02 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=29.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDP 42 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~ 42 (232)
|+..+|.|.||+|.+|+.+++.|.++. .+++.+.+..
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~ 51 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR 51 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch
Confidence 455789999999999999999999885 4777665543
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0009 Score=54.94 Aligned_cols=71 Identities=30% Similarity=0.273 Sum_probs=46.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-cCCCEEEEccc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-DGCDGVFHTAS 88 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vi~~Ag 88 (232)
.+||+||+|++|...++.+...|++|+++++++++. +.++++.. . +.+ |..+.+.++++- .++|++|.++|
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~--~~~~~lGa---~-~vi--~~~~~~~~~~~~~~~~d~v~d~~g 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH--GYLKSLGA---N-RIL--SRDEFAESRPLEKQLWAGAIDTVG 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH--HHHHHHTC---S-EEE--EGGGSSCCCSSCCCCEEEEEESSC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhcCC---C-EEE--ecCCHHHHHhhcCCCccEEEECCC
Confidence 399999999999999999999999999999987643 33333321 1 122 222222222221 25789988875
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0011 Score=56.28 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=51.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-------------Cc--
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-------------EE-- 70 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~-- 70 (232)
+.+++|+|+|+ |.+|..+++.+...|++|++++|++.... ..+++ + ..++..|.. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~--~~~~l---G--a~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKE--QVQSM---G--AEFLELDFKEEAGSGDGYAKVMSDAF 241 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHH--HHHHT---T--CEECCC--------CCHHHHHHSHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHc---C--CEEEEecccccccccccchhhccHHH
Confidence 45789999997 88999999999999999999999875432 12222 1 122222221 11
Q ss_pred -----chHHHhhcCCCEEEEccc
Q 026852 71 -----GSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 71 -----~~~~~~~~~~d~vi~~Ag 88 (232)
+.+.++++++|+||.+++
T Consensus 242 ~~~~~~~l~e~~~~aDvVI~~~~ 264 (401)
T 1x13_A 242 IKAEMELFAAQAKEVDIIVTTAL 264 (401)
T ss_dssp HHHHHHHHHHHHHHCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCc
Confidence 136677778999999864
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0017 Score=52.21 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=47.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEE-EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|++.+|.|.||+|.+|+.+++.+.+. ++++++ ++|+.+...-+...++.... .++.-.+++.++++++|+|
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~-------~gv~v~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ-------TGVALTDDIERVCAEADYL 77 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC-------CSCBCBCCHHHHHHHCSEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC-------CCceecCCHHHHhcCCCEE
Confidence 44578999999999999999999877 677776 46664321101111111100 0233345566666678999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.+..
T Consensus 78 IDfT~ 82 (272)
T 4f3y_A 78 IDFTL 82 (272)
T ss_dssp EECSC
T ss_pred EEcCC
Confidence 98864
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0011 Score=52.70 Aligned_cols=80 Identities=19% Similarity=0.158 Sum_probs=51.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chhh-hhhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEH-LRELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~--~~~~~~~~~~ 64 (232)
+++++|+|.|+ ||+|+++++.|++.|. ++.++|++.-.. ..+. .+.+. ...-+++.+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 34578999998 5699999999999997 677776653110 0111 11111 1123455555
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.+++ .+.+.++++++|+||.+.
T Consensus 105 ~~~~-~~~~~~~~~~~DvVi~~~ 126 (251)
T 1zud_1 105 QRLT-GEALKDAVARADVVLDCT 126 (251)
T ss_dssp SCCC-HHHHHHHHHHCSEEEECC
T ss_pred ccCC-HHHHHHHHhcCCEEEECC
Confidence 5553 356777888999999774
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0015 Score=55.50 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=49.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--C
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--G 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~ 79 (232)
-.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. -+. .|..+.+ .+.++.. +
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~~~~lGa----~~v--i~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR--NLAKELGA----DHV--IDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH--HHHHHHTC----SEE--ECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHcCC----CEE--EcCCCCCHHHHHHHHhCCCC
Confidence 35789999998 9999999999999999 899998887543 23333321 122 2333333 3333333 5
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.++|
T Consensus 283 ~D~vid~~g 291 (404)
T 3ip1_A 283 AKLFLEATG 291 (404)
T ss_dssp CSEEEECSS
T ss_pred CCEEEECCC
Confidence 899999986
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0016 Score=54.33 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=47.5
Q ss_pred CcEEEEECCCChhHHHH-HHHH-HHCCCe-EEEEEcCCC---CcchhhhhhhcCCCCceEEEEcCCCCc--chHHHhhcC
Q 026852 8 EKVVCVTGASGFVASWL-VKLL-LQRGYT-VKATVRDPN---SPKTEHLRELDGATERLHLFKANLLEE--GSFDSAVDG 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~-~~~l-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 79 (232)
+.+|+|+|| |++|... ++.+ ...|++ |++++++++ +. +.++++. ...+ |..+. .++.++-.+
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~--~~~~~lG-----a~~v--~~~~~~~~~i~~~~gg 242 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI--DIIEELD-----ATYV--DSRQTPVEDVPDVYEQ 242 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH--HHHHHTT-----CEEE--ETTTSCGGGHHHHSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH--HHHHHcC-----Cccc--CCCccCHHHHHHhCCC
Confidence 378999999 9999999 8877 677997 999999876 32 2233321 2222 44432 224343125
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|+||.++|
T Consensus 243 ~Dvvid~~g 251 (357)
T 2b5w_A 243 MDFIYEATG 251 (357)
T ss_dssp EEEEEECSC
T ss_pred CCEEEECCC
Confidence 899999986
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0022 Score=51.32 Aligned_cols=56 Identities=23% Similarity=0.216 Sum_probs=46.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+.|++++|.|+++-+|+.+++.|++.|++|+++.|+. ..+.+.++++|+||.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------------~~L~~~~~~ADIVI~ 199 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------------KDIGSMTRSSKIVVV 199 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHHSSEEEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------ccHHHhhccCCEEEE
Confidence 6889999999999999999999999999999886532 234466777899998
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
..|.
T Consensus 200 Avg~ 203 (276)
T 3ngx_A 200 AVGR 203 (276)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8763
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0022 Score=53.79 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=48.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. . +. .|.++.+..+.+.+
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~a~~lGa---~-~v--i~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKR--RLAEEVGA---T-AT--VDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH--HHHHHHTC---S-EE--ECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHcCC---C-EE--ECCCCcCHHHHHHhhhhccCC
Confidence 5679999998 9999999999999999 888888876532 22333321 1 12 34444433333322
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|+||.++|
T Consensus 253 g~Dvvid~~G 262 (370)
T 4ej6_A 253 GVDVVIECAG 262 (370)
T ss_dssp CEEEEEECSC
T ss_pred CCCEEEECCC
Confidence 5899999876
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0011 Score=53.94 Aligned_cols=34 Identities=29% Similarity=0.325 Sum_probs=31.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++|.|.|+ |.+|..++..|.+.|++|++++|+++
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~ 37 (316)
T 2ew2_A 4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA 37 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 57999996 89999999999999999999999874
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0036 Score=50.35 Aligned_cols=58 Identities=24% Similarity=0.179 Sum_probs=48.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.||+++|.|+++-+|+.++..|++.|++|+++.|.. ..+.+.++++|+|
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIV 208 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT----------------------------TDLKSHTTKADIL 208 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SSHHHHHTTCSEE
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHhcccCCEE
Confidence 357899999999999999999999999999998885532 1345677889999
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|...|.
T Consensus 209 I~Avg~ 214 (285)
T 3l07_A 209 IVAVGK 214 (285)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 988873
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0024 Score=53.04 Aligned_cols=73 Identities=21% Similarity=0.153 Sum_probs=47.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEE------cCC-CCcchHHHhhcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK------ANL-LEEGSFDSAVDGCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~D~-~~~~~~~~~~~~~d 81 (232)
++|.|.|+ |.+|..++..|.+.|++|++++|+++... .+.+.. .+.+.. ..+ ...++..++++++|
T Consensus 5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIK--EIQDRG----AIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH--HHHHHT----SEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH--HHHhcC----CeEEeccccccccccceecCCHHHHHhcCC
Confidence 68999997 89999999999999999999999874322 111110 111110 111 11234556677899
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
+||.+..
T Consensus 78 ~vi~~v~ 84 (359)
T 1bg6_A 78 VILIVVP 84 (359)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 9998874
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00092 Score=56.30 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=49.5
Q ss_pred CCcEEEEEC-CCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--CC
Q 026852 7 EEKVVCVTG-ASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--GC 80 (232)
Q Consensus 7 ~~~~ilItG-a~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~ 80 (232)
++.+++|.| |+|++|...++.+...|++|+++++++++. +.+.++.. . +.+ |..+.+ .+.++.. ++
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~--~~~~~lGa---~-~~~--~~~~~~~~~~v~~~t~~~g~ 241 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA--DLLKAQGA---V-HVC--NAASPTFMQDLTEALVSTGA 241 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH--HHHHHTTC---S-CEE--ETTSTTHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHhCCC---c-EEE--eCCChHHHHHHHHHhcCCCc
Confidence 356789987 999999999999988999999999887543 22333321 1 122 333322 3333332 69
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.++|
T Consensus 242 d~v~d~~g 249 (379)
T 3iup_A 242 TIAFDATG 249 (379)
T ss_dssp CEEEESCE
T ss_pred eEEEECCC
Confidence 99999987
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00083 Score=55.71 Aligned_cols=73 Identities=21% Similarity=0.308 Sum_probs=49.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhhc--CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVD--GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d 81 (232)
.+.+|||+|+ |++|...++.+... |++|+++++++++. +.++++.. . +. .|..+ .+.+.++-+ ++|
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~--~~~~~lGa--~--~v--i~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR--DFALELGA--D--YV--SEMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH--HHHHHHTC--S--EE--ECHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH--HHHHHhCC--C--EE--eccccchHHHHHhhcCCCcc
Confidence 6789999999 99999999999988 99999999887533 22333321 1 12 23323 333333332 689
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
+||.++|
T Consensus 241 ~vid~~g 247 (344)
T 2h6e_A 241 IAIDLVG 247 (344)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999986
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0011 Score=55.24 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=33.7
Q ss_pred CC-cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EE-KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~-~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
.+ .+|||+||+|++|...++.+...|++|++++++.++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 46 799999999999999999888889999999887754
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0025 Score=53.10 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=28.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCC-----C-eEEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRG-----Y-TVKATVR 40 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g-----~-~V~~~~r 40 (232)
++++|.|.||+|.+|+.+++.|++++ . +++.+.+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s 47 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA 47 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC
Confidence 34789999999999999999999887 4 6666654
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0029 Score=52.99 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=48.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHH----hh-c
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDS----AV-D 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~----~~-~ 78 (232)
-.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. . +. .|..+ .+++.+ +. .
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~--~~~~~lGa---~-~v--i~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF--EKAKVFGA---T-DF--VNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHTTC---C-EE--ECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH--HHHHHhCC---c-eE--EeccccchhHHHHHHHHhCC
Confidence 35679999996 9999999999999999 799998887543 22333321 1 22 24332 122322 22 2
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|++|+++|
T Consensus 262 g~D~vid~~g 271 (374)
T 1cdo_A 262 GVDFSLECVG 271 (374)
T ss_dssp CBSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6899999986
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0064 Score=52.58 Aligned_cols=99 Identities=17% Similarity=0.315 Sum_probs=68.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
-++++|.|| |-||..+++.| +.+++|.++.+++++. +.+...-++...+.+|.+|.+-+.+. ++++|++|-.
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~-----~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRA-----EKLSEELENTIVFCGDAADQELLTEENIDQVDVFIAL 307 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHH-----HHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHH-----HHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence 367888885 55999999987 5579999998887543 22222224577899999999988876 7789999854
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecc
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS 130 (232)
- ..+ ++|+..++. +++. +.++.|-.-.
T Consensus 308 T-------~~D-----e~Ni~~~ll----Ak~~-gv~kvIa~vn 334 (461)
T 4g65_A 308 T-------NED-----ETNIMSAML----AKRM-GAKKVMVLIQ 334 (461)
T ss_dssp C-------SCH-----HHHHHHHHH----HHHT-TCSEEEEECS
T ss_pred c-------cCc-----HHHHHHHHH----HHHc-CCcccccccc
Confidence 2 233 468877664 3334 6777665433
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0012 Score=55.65 Aligned_cols=75 Identities=16% Similarity=0.172 Sum_probs=49.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc----hHHHhhc--C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG----SFDSAVD--G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~~~~--~ 79 (232)
.+.+|||+| +|++|...++.+...| ++|+++++++++. +.++++. . -+.+..+.++.+ .+.++.. +
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~~~~lG---a-~~vi~~~~~~~~~~~~~v~~~~~g~g 267 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL--KLAEEIG---A-DLTLNRRETSVEERRKAIMDITHGRG 267 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH--HHHHHTT---C-SEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHH--HHHHHcC---C-cEEEeccccCcchHHHHHHHHhCCCC
Confidence 567999999 8999999999999999 6999999887533 2233321 1 123322211122 2333333 5
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|+||.++|
T Consensus 268 ~Dvvid~~g 276 (380)
T 1vj0_A 268 ADFILEATG 276 (380)
T ss_dssp EEEEEECSS
T ss_pred CcEEEECCC
Confidence 899999986
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00062 Score=54.32 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=46.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCe-EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
|+..+++++|.|.|+ |.+|..+++.|.+.|++ |.+.+|++++... ..+.. .+.. .++..++++++
T Consensus 4 m~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~-~~~~~-----g~~~-------~~~~~~~~~~~ 69 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARE-LAQKV-----EAEY-------TTDLAEVNPYA 69 (266)
T ss_dssp ---CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHH-HHHHT-----TCEE-------ESCGGGSCSCC
T ss_pred hhcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHH-HHHHc-----CCce-------eCCHHHHhcCC
Confidence 444455678999997 99999999999999998 8888888643211 11111 1211 12333456678
Q ss_pred CEEEEcc
Q 026852 81 DGVFHTA 87 (232)
Q Consensus 81 d~vi~~A 87 (232)
|+||-+.
T Consensus 70 Dvvi~av 76 (266)
T 3d1l_A 70 KLYIVSL 76 (266)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9888765
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0038 Score=52.84 Aligned_cols=73 Identities=16% Similarity=0.113 Sum_probs=49.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc----chHHHhhc--C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE----GSFDSAVD--G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~--~ 79 (232)
.+.+|||.|+ |++|...++.+...|+ +|+++++++++. +.++++ +. +.+ |..+. +.+.++.. +
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~a~~l---Ga--~~i--~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERL--KLLSDA---GF--ETI--DLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH--HHHHTT---TC--EEE--ETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH--HHHHHc---CC--cEE--cCCCcchHHHHHHHHhCCCC
Confidence 5679999997 9999999998888899 899999987532 222222 22 333 44332 33444443 5
Q ss_pred CCEEEEcccc
Q 026852 80 CDGVFHTASP 89 (232)
Q Consensus 80 ~d~vi~~Ag~ 89 (232)
+|+||.++|.
T Consensus 255 ~Dvvid~~g~ 264 (398)
T 2dph_A 255 VDCGVDAVGF 264 (398)
T ss_dssp EEEEEECSCT
T ss_pred CCEEEECCCC
Confidence 8999999873
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0013 Score=54.76 Aligned_cols=78 Identities=13% Similarity=0.155 Sum_probs=48.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d 81 (232)
.+.+|||+||+|++|...++.+...|++|+++.++.++.. .+.++++. . -+.+..+-.+.+.+.+..+ ++|
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG---a-~~vi~~~~~~~~~~~~~~~~~~~~D 242 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLG---A-EHVITEEELRRPEMKNFFKDMPQPR 242 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTT---C-SEEEEHHHHHSGGGGGTTSSSCCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcC---C-cEEEecCcchHHHHHHHHhCCCCce
Confidence 5689999999999999999988888999988877654321 12222221 1 1222211001134444443 489
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|.++|
T Consensus 243 vvid~~g 249 (357)
T 1zsy_A 243 LALNCVG 249 (357)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999876
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0039 Score=50.16 Aligned_cols=57 Identities=28% Similarity=0.181 Sum_probs=47.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++||+++|.|+++-+|+.++..|++.|++|+++.+.. ..+.+.++++|+||
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T----------------------------~~L~~~~~~ADIVI 209 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT----------------------------RDLADHVSRADLVV 209 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHTCSEEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC----------------------------cCHHHHhccCCEEE
Confidence 47899999999999999999999999999999885532 13446677899999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
...|.
T Consensus 210 ~Avg~ 214 (286)
T 4a5o_A 210 VAAGK 214 (286)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 88763
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0038 Score=50.71 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=32.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++|.|.||.|.||.++++.|.+.|++|++++|+++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 57999999999999999999999999999988764
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0032 Score=52.74 Aligned_cols=74 Identities=14% Similarity=0.119 Sum_probs=48.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchH----HHhhc-
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSF----DSAVD- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~----~~~~~- 78 (232)
-.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. . +. .|..+ .+++ .++..
T Consensus 190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~--~~~~~lGa---~-~v--i~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF--AKAKEVGA---T-EC--VNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHTTC---S-EE--ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHhCC---c-eE--ecccccchhHHHHHHHHhCC
Confidence 35689999995 9999999999999999 799998887543 22333321 1 22 23332 1222 22222
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|+||.++|
T Consensus 261 g~D~vid~~g 270 (374)
T 2jhf_A 261 GVDFSFEVIG 270 (374)
T ss_dssp CBSEEEECSC
T ss_pred CCcEEEECCC
Confidence 5899999986
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0032 Score=52.64 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=47.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHH-CCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC--cchHHHhh-cCCCE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAV-DGCDG 82 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-~~~d~ 82 (232)
.+.+|||+||+|++|...++.+.. .|++|+++++++++. +.+.++. .. +.+ |..+ .+.+.++- .++|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~--~~~~~lG---ad-~vi--~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ--EWVKSLG---AH-HVI--DHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH--HHHHHTT---CS-EEE--CTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH--HHHHHcC---CC-EEE--eCCCCHHHHHHHhcCCCceE
Confidence 578999999999999999887776 589999999887532 2233332 11 222 3322 11222221 25799
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
+|.++|
T Consensus 243 vid~~g 248 (363)
T 4dvj_A 243 VFSTTH 248 (363)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 999876
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0024 Score=54.06 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=53.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcC----------------CCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN----------------LLE 69 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~~ 69 (232)
..+.+|+|.|+ |-+|...++.+...|++|+++++++.+.. .++++. ..++..+ +++
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~--~~~~~G-----~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKE--QVASLG-----AKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHH--HHHHTT-----CEECCCCC-----------------C
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHcC-----Cceeecccccccccccccchhhhcch
Confidence 35678999999 78999999999999999999999986432 222221 1222221 222
Q ss_pred ------cchHHHhhcCCCEEEEccc
Q 026852 70 ------EGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 70 ------~~~~~~~~~~~d~vi~~Ag 88 (232)
.+.+.++++++|+||+++.
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvl 284 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTAL 284 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCc
Confidence 2467888899999999874
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0053 Score=51.46 Aligned_cols=68 Identities=18% Similarity=0.284 Sum_probs=52.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
|+|+|+|+ |..|+.+++.+.+.|++|++++.++..... .+. . .++..|..|.+.+.++.+++|+|+..
T Consensus 2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~----~~~---~--~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG----QVA---D--EQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG----GGS---S--EEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh----hhC---c--eEEECCCCCHHHHHHHHhcCCEEEec
Confidence 58999997 578999999999999999999876643211 111 1 35668889999999888899998854
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0034 Score=52.42 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=55.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcc-----------------h----hhhhhhcCCCCceEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK-----------------T----EHLRELDGATERLHLF 63 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~-----------------~----~~~~~~~~~~~~~~~~ 63 (232)
+++.+|+|.|+ ||+|+++++.|++.|. ++.++|++.-... . +.+.++ +..-+++.+
T Consensus 116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~v~~~ 193 (353)
T 3h5n_A 116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR-NSEISVSEI 193 (353)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEE
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH-CCCCeEEEe
Confidence 34578999998 7799999999999996 7888887642110 0 111111 224567778
Q ss_pred EcCCCCcchHHHhhcCCCEEEEcc
Q 026852 64 KANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 64 ~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..++++...+.. ++++|+||.+.
T Consensus 194 ~~~i~~~~~~~~-~~~~DlVvd~~ 216 (353)
T 3h5n_A 194 ALNINDYTDLHK-VPEADIWVVSA 216 (353)
T ss_dssp ECCCCSGGGGGG-SCCCSEEEECC
T ss_pred ecccCchhhhhH-hccCCEEEEec
Confidence 888877665666 89999999874
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0016 Score=53.12 Aligned_cols=70 Identities=24% Similarity=0.257 Sum_probs=47.7
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
+.+...++|.|.| .|.+|..+++.|++.|++|++.+|++++.. .+.+. . +. ..++..++++++|+
T Consensus 4 ~~~~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~--~~~~~---g--~~-------~~~~~~e~~~~aDv 68 (306)
T 3l6d_A 4 SDESFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAA--ALVAA---G--AH-------LCESVKAALSASPA 68 (306)
T ss_dssp CCCCCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHH--HHHHH---T--CE-------ECSSHHHHHHHSSE
T ss_pred CcccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHC---C--Ce-------ecCCHHHHHhcCCE
Confidence 3445567788886 588999999999999999999999875332 11111 1 11 12345566667888
Q ss_pred EEEcc
Q 026852 83 VFHTA 87 (232)
Q Consensus 83 vi~~A 87 (232)
||-+.
T Consensus 69 Vi~~v 73 (306)
T 3l6d_A 69 TIFVL 73 (306)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 88765
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0025 Score=53.07 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=47.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC--C-cc---hHHHhh-c
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLL--E-EG---SFDSAV-D 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~-~~---~~~~~~-~ 78 (232)
.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. . +.+ |.. + .+ .+.+.. .
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~a~~lGa---~-~vi--~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL--SKAKEIGA---D-LVL--QISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHHTTC---S-EEE--ECSSCCHHHHHHHHHHHHTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHhCC---C-EEE--cCcccccchHHHHHHHHhCC
Confidence 5678999996 8999999999888999 899999887532 22333221 1 222 333 2 22 222222 3
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|+||.++|
T Consensus 242 g~D~vid~~g 251 (356)
T 1pl8_A 242 KPEVTIECTG 251 (356)
T ss_dssp CCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6899999986
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0017 Score=51.86 Aligned_cols=68 Identities=16% Similarity=0.066 Sum_probs=47.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++ +++|.|+ |++|+++++.|.+.|++|++++|++++.. +..+.+.. . . +++.++ +++|+||
T Consensus 114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~-~l~~~~~~-----~-----~---~~~~~~-~~~Divi 176 (263)
T 2d5c_A 114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRAL-ALAEEFGL-----R-----A---VPLEKA-REARLLV 176 (263)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHH-HHHHHHTC-----E-----E---CCGGGG-GGCSEEE
T ss_pred CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhcc-----c-----h---hhHhhc-cCCCEEE
Confidence 3677 8999997 77999999999999999999999874321 11122211 1 1 233445 7899999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
++...
T Consensus 177 ~~tp~ 181 (263)
T 2d5c_A 177 NATRV 181 (263)
T ss_dssp ECSST
T ss_pred EccCC
Confidence 88753
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.004 Score=52.23 Aligned_cols=74 Identities=16% Similarity=0.082 Sum_probs=48.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cch----HHHhh-c
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGS----FDSAV-D 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~----~~~~~-~ 78 (232)
-.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. . +. .|.++ .++ +.++. .
T Consensus 194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~a~~lGa---~-~v--i~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF--PKAKALGA---T-DC--LNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHTTC---S-EE--ECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHhCC---c-EE--EccccccchHHHHHHHHhCC
Confidence 35679999996 9999999999988999 799998887543 22333321 1 22 23332 122 22222 2
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|+||.++|
T Consensus 265 g~Dvvid~~G 274 (376)
T 1e3i_A 265 GVDYSLDCAG 274 (376)
T ss_dssp CBSEEEESSC
T ss_pred CccEEEECCC
Confidence 6899999986
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.002 Score=54.00 Aligned_cols=74 Identities=16% Similarity=0.117 Sum_probs=48.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cch----HHHhhc-
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGS----FDSAVD- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~----~~~~~~- 78 (232)
-.+.+|||+|+ |++|...++.+...|+ +|+++++++++. +.++++.. . +. .|..+ .++ +.++..
T Consensus 189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~--~~~~~lGa---~-~v--i~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF--ARAKEFGA---T-EC--INPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH--HHHHHHTC---S-EE--ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHcCC---c-eE--eccccccccHHHHHHHHhCC
Confidence 35679999996 9999999998888898 799998887643 22333321 1 22 23332 122 323222
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|++|.++|
T Consensus 260 g~D~vid~~g 269 (373)
T 2fzw_A 260 GVDYSFECIG 269 (373)
T ss_dssp CBSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6899999986
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0034 Score=49.55 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=27.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEE-EEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~-~~r~~~ 43 (232)
++|.|.|+ |.+|+.+++.+.+.+.+++. ++|+.+
T Consensus 4 mkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~ 38 (243)
T 3qy9_A 4 MKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPK 38 (243)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred eEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcc
Confidence 68999999 99999999999998767665 455543
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0032 Score=52.84 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=48.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cch----HHHhhc-C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGS----FDSAVD-G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~----~~~~~~-~ 79 (232)
.+.+|+|+|+ |++|...++.+...|+ +|+++++++++. +.++++.. -+. .|..+ .++ +.++.. +
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~--~~a~~lGa----~~v--i~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKY--ETAKKFGV----NEF--VNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHH--HHHHTTTC----CEE--ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHcCC----cEE--EccccCchhHHHHHHHhcCCC
Confidence 5678999998 9999999999988899 899999888653 22333321 122 23321 122 333322 5
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.++|
T Consensus 264 ~D~vid~~g 272 (378)
T 3uko_A 264 VDYSFECIG 272 (378)
T ss_dssp BSEEEECSC
T ss_pred CCEEEECCC
Confidence 899999986
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0023 Score=52.10 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=31.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
+.++|.|.| .|.+|..+++.|++.|++|++.+|++++
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 42 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQA 42 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 346788886 5889999999999999999999998753
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0033 Score=52.06 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=49.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~ 82 (232)
-.+.+++|+|+ |++|...++.+... |.+|+++++++++. +.++++.. . +.+..+-...+.+.++.. ++|+
T Consensus 170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~--~~~~~lGa---~-~~i~~~~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL--ALAREVGA---D-AAVKSGAGAADAIRELTGGQGATA 242 (345)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH--HHHHHTTC---S-EEEECSTTHHHHHHHHHGGGCEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH--HHHHHcCC---C-EEEcCCCcHHHHHHHHhCCCCCeE
Confidence 35679999998 99999999888777 78999999887543 22333321 1 222222122234444443 6899
Q ss_pred EEEccc
Q 026852 83 VFHTAS 88 (232)
Q Consensus 83 vi~~Ag 88 (232)
+|.++|
T Consensus 243 v~d~~G 248 (345)
T 3jv7_A 243 VFDFVG 248 (345)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999986
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 232 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-26 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-24 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-23 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 9e-23 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-22 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 6e-22 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-21 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-17 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-17 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 8e-16 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 2e-15 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-15 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-15 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 7e-15 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-14 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 7e-14 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 4e-12 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 7e-12 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 2e-11 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 4e-09 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-08 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 2e-07 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-07 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 4e-07 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 5e-07 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 5e-07 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 7e-07 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 1e-06 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 3e-06 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 3e-06 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 5e-06 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 9e-06 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 9e-06 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 1e-05 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 1e-05 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 1e-05 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 2e-05 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 2e-05 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 2e-05 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 2e-05 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 2e-05 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 2e-05 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 3e-05 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 3e-05 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 4e-05 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 4e-05 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 4e-05 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 5e-05 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 5e-05 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 6e-05 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 6e-05 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 6e-05 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-05 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 9e-05 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 1e-04 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 1e-04 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 1e-04 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-04 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 1e-04 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 2e-04 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-04 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 3e-04 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 3e-04 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 5e-04 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 7e-04 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 7e-04 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 0.001 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 0.001 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.002 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 0.002 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 0.003 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 0.003 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 0.003 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 0.004 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 0.004 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 2e-26
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 21/210 (10%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + +TG +GFV S L L+ G+ V V + + + ++ G E L +++
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEVTV-VDNFFTGRKRNVEHWIGH-ENFELINHDVV 59
Query: 69 EEGSFDSAVDGCDGVFHTASP--VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ D ++H ASP NP + +GTLN+L +V R++
Sbjct: 60 -----EPLYIEVDQIYHLASPASPPNYMYNP-IKTLKTNTIGTLNMLGLAKRVG--ARLL 111
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
L S+ E + P + Y K +AE + + K+ G++
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGP------RACYDEGKRVAETMCYAYMKQEGVE 165
Query: 187 LVAIHPGTVIGPFFQPILNFGAEVILNLIN 216
+ GP V+ N I
Sbjct: 166 VRVARIFNTFGPRMHM---NDGRVVSNFIL 192
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 97.6 bits (242), Expect = 1e-24
Identities = 46/233 (19%), Positives = 79/233 (33%), Gaps = 28/233 (12%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL----DGATERLHLFK 64
KV +TG +G S+L + LL++GY V R +S TE + + + HL
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61
Query: 65 ANLLEEGSFDSAVDGC--DGVF--HTASPVIFLSDNPQADIVDPAVMGTLNVLRSC--AK 118
+L + + + D V+ S V ++P+ D MGTL +L +
Sbjct: 62 GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTA-DVDAMGTLRLLEAIRFLG 120
Query: 119 VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 178
+ R S+ + ++ ET P Y++AK A
Sbjct: 121 LEKKTRFYQASTSELY-----GLVQEIPQKETTPFYPRSP------YAVAKLYAYWITVN 169
Query: 179 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231
+ + G+ P G + I I + A +Y
Sbjct: 170 YRESYGMYACNGILFNHESP------RRGETFVTRKITRAIANIAQGLESCLY 216
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 94.2 bits (233), Expect = 1e-23
Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 28/192 (14%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ V + G G V S + + L QRG L+L + +
Sbjct: 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------LNLLDSRAV 46
Query: 69 EEGSFDSAVDGCDGVFHTASPV--IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ A + D V+ A+ V I ++ AD + +M N++ + + + + +++
Sbjct: 47 HD---FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLL 102
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
S P + E+ L N E Y++AK + + ++ G D
Sbjct: 103 FLGSSCIY-----PKLAKQPMAESELLQGTLEPTN-EPYAIAKIAGIKLCESYNRQYGRD 156
Query: 187 LVAIHPGTVIGP 198
++ P + GP
Sbjct: 157 YRSVMPTNLYGP 168
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 92.6 bits (228), Expect = 9e-23
Identities = 74/226 (32%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFKANL 67
+V VTGA+GFVAS +V+ LL+ GY V+ T R + + + ++
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVL 127
L++G++D + G GV H AS V F N ++V PA+ GTLN LR+ A S+KR VL
Sbjct: 72 LKQGAYDEVIKGAAGVAHIASVVSF--SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVL 129
Query: 128 TSSIGAMLLNE---------TPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 178
TSS + L+ + ID+ +++ Y+ +KT AE AAWK
Sbjct: 130 TSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWK 189
Query: 179 FAKENGI--DLVAIHPGTVIGPFFQPILNFGA--EVILNLINGNIY 220
F EN L A+ P IG F P G+ +++L NG +
Sbjct: 190 FMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS 235
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 92.1 bits (228), Expect = 1e-22
Identities = 37/220 (16%), Positives = 77/220 (35%), Gaps = 17/220 (7%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-SPKTEHLRELDGATERLHLFKANLLE 69
+ +TG +GF+ S +V+ +++ + + E L ++ + R + A++ +
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISES-NRYNFEHADICD 61
Query: 70 EGSFDSAVDG--CDGVFHTASPV-IFLSDNPQADIVDPAVMGTLNVLRSCAKVHS----- 121
+ D V H A+ + S A ++ ++GT +L K S
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121
Query: 122 ---IKRVVLTSSIGAM-LLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAW 177
R S+ L + V + + YS +K ++
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSS--PYSASKASSDHLVR 179
Query: 178 KFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 217
+ + G+ + + GP+ P VILN + G
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEG 218
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.0 bits (222), Expect = 6e-22
Identities = 36/200 (18%), Positives = 63/200 (31%), Gaps = 21/200 (10%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-----DGATERLHLF 63
V +TG +G S+L + LL++GY V VR +S T + L + L
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61
Query: 64 KANLLEEGSFDSAVDGCDGVFH---TASPVIFLSDNPQADIVDPAVMGTLNVLRSC--AK 118
+L + ++ A + +S + D +GTL +L +
Sbjct: 62 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121
Query: 119 VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 178
+ + + S+ ++ ET P Y AK A
Sbjct: 122 LINSVKFYQASTSELY-----GKVQEIPQKETTPFYPR------SPYGAAKLYAYWIVVN 170
Query: 179 FAKENGIDLVAIHPGTVIGP 198
F + + V P
Sbjct: 171 FREAYNLFAVNGILFNHESP 190
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 87.2 bits (215), Expect = 6e-21
Identities = 45/231 (19%), Positives = 80/231 (34%), Gaps = 24/231 (10%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKA----TVRD--PNSPKTEHLRELDGATERLHLFK 64
+ VTG +GF+ S V+ LL Y V D + +L +D A RL
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVH 61
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNP-QADIVDPAVMGTLNVLRSCAKVHSIK 123
++ + G + G D + H A+ + + V GT +L+ +
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD-AGVG 120
Query: 124 RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183
RVV S+ E+ P Y+ +K ++ A + +
Sbjct: 121 RVVHVSTNQVY-----GSIDSGSWTESSPLEPN------SPYAASKAGSDLVARAYHRTY 169
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231
G+D+ GP+ P + NL++G +Y R ++
Sbjct: 170 GLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVH 219
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 78.1 bits (191), Expect = 1e-17
Identities = 38/230 (16%), Positives = 71/230 (30%), Gaps = 12/230 (5%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + VTG +GF+ S V + V TV D + +R+ L ++
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62
Query: 69 EEGSFDSAVDGCDGVFHTA--SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ D D + H A S ++P I +GT +L + K +
Sbjct: 63 DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHT-NFIGTYTLLEAARKYD----IR 117
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE---WYSLAKTLAEEAAWKFAKEN 183
+ + P+ D+ + N YS K ++ + +
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231
G+ + GP+ ++ L +Y R I+
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIH 227
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 77.0 bits (188), Expect = 2e-17
Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 17/210 (8%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ VTG +G ++L KLLL++GY V V +S LREL G + ++
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMA 59
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADI---VDPAVMGTLNVLRSCAKVHSIKRV 125
+ S AV +G ++L + + R
Sbjct: 60 DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 185
S+ + DE + Y +AK + + G+
Sbjct: 120 YQASTSEMF-----GLIQAERQDENT------PFYPRSPYGVAKLYGHWITVNYRESFGL 168
Query: 186 DLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
+ P F + + +
Sbjct: 169 HASSGILFNHESPLRGI--EFVTRKVTDAV 196
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 73.1 bits (178), Expect = 8e-16
Identities = 41/192 (21%), Positives = 71/192 (36%), Gaps = 16/192 (8%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ +TGA GF+AS + + L G+ V A+ N TE + +L
Sbjct: 18 ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF-------CDEFHLVDLRVM 70
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAV-MGTLNVLRSCAKVHSIKRVVLTS 129
+ +G D VF+ A+ + + V + A+++ IKR S
Sbjct: 71 ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 130
Query: 130 SIGAMLLNETPMTPDVVI--DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDL 187
S + T +V + + W + P + + L K EE + K+ GI+
Sbjct: 131 SACIYPEFKQLETTNVSLKESDAWPAEPQ------DAFGLEKLATEELCKHYNKDFGIEC 184
Query: 188 VAIHPGTVIGPF 199
+ GPF
Sbjct: 185 RIGRFHNIYGPF 196
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 72.0 bits (175), Expect = 2e-15
Identities = 37/197 (18%), Positives = 65/197 (32%), Gaps = 14/197 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE-----RLHLF 63
K+ +TG +G S+L + LL +GY V +R ++ T+ + + + L
Sbjct: 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61
Query: 64 KANLLEEGSFDSAVD--GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS 121
A+L + S +D D V++ A+ D V L + H+
Sbjct: 62 YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
I A TP ET +P + Y+ +K A + +
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP------RSPYAASKCAAHWYTVNYRE 174
Query: 182 ENGIDLVAIHPGTVIGP 198
G+ P
Sbjct: 175 AYGLFACNGILFNHESP 191
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 71.6 bits (174), Expect = 2e-15
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++K + V GA+G + L+++ G+ V+A V E L+ + T LF+
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT----LFQGP 57
Query: 67 LLE-EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPA 105
LL D+ +G F + D+ D A
Sbjct: 58 LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAA 97
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 71.1 bits (173), Expect = 4e-15
Identities = 39/225 (17%), Positives = 68/225 (30%), Gaps = 15/225 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTG SG++ S LLQ G+ V NS ++ + + ++ E
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62
Query: 71 GSFDSAVD--GCDGVFHTA--SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ D V H A V P + D V GTL ++ + + ++K +
Sbjct: 63 ALMTEILHDHAIDTVIHFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAM-RAANVKNFI 120
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGID 186
+SS + T S K E +
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL---------TDLQKAQPDWS 171
Query: 187 LVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231
+ + +G + + I N + I A+ R +
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLA 216
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 70.1 bits (170), Expect = 7e-15
Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 11/197 (5%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ +TG GF+ S L L +G + T++L L ++ +
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNK 61
Query: 71 GSFDSAVDGC--DGVFHTA--SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ D FH A + DNP D + V GTLN+L + + +S ++
Sbjct: 62 NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDF-EINVGGTLNLLEAVRQYNSNCNII 120
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN-----KEWYSLAKTLAEEAAWKFAK 181
+S+ E + T P E+ Y +K A++ +A+
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180
Query: 182 ENGIDLVAIHPGTVIGP 198
G++ V ++ G
Sbjct: 181 IFGLNTVVFRHSSMYGG 197
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 69.6 bits (169), Expect = 1e-14
Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 25/235 (10%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVR--DPNSPKTEHLRELDGATE----RLHL 62
KV +TG +GF+ S L++ LL+ V + + +R L + +
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76
Query: 63 FKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI 122
L++ + A V ++P + G LN+L +
Sbjct: 77 GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSN-ATNIDGFLNMLIAARDAKVQ 135
Query: 123 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 182
SS + P + E P+ Y++ K + E A F++
Sbjct: 136 SFTYAASS------STYGDHPGLPKVEDTIGKPL------SPYAVTKYVNELYADVFSRC 183
Query: 183 NGIDLVAIHPGTVIGPFFQPILNFGA---EVILNLINGN---IYSAAIQDRIMIY 231
G + + V G P + A + ++I G+ I R Y
Sbjct: 184 YGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCY 238
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 67.4 bits (163), Expect = 7e-14
Identities = 38/227 (16%), Positives = 68/227 (29%), Gaps = 11/227 (4%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K+V VTG +G++ S V L++ GY NS R + ++ +L
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61
Query: 69 EEGSFDSAVD--GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ + D V H A + VL + +++ + V
Sbjct: 62 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121
Query: 127 LTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEE--AAWKFAKENG 184
SS + + T + I E P Y K E + +
Sbjct: 122 -FSSSATVYGDATRFPNMIPIPEECPLGPTNP------YGHTKYAIENILNDLYNSDKKS 174
Query: 185 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231
+ IG ++ I N + + A+ R +Y
Sbjct: 175 WKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLY 221
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 62.5 bits (150), Expect = 4e-12
Identities = 24/223 (10%), Positives = 57/223 (25%), Gaps = 33/223 (14%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE-RLHLFKANLLE 69
V + G +G++ +V + G+ R + ++ L + L +A+L +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTS 129
A+ D V + + + + A + +IKR + +
Sbjct: 66 HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA----------IKEAGNIKRFLPSE 115
Query: 130 SIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVA 189
+ + + + + I
Sbjct: 116 ------------------FGMDPDIMEHALQPGSIT----FIDKRKVRRAIEAASIPYTY 153
Query: 190 IHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIYE 232
+ G F + ++ IY I + E
Sbjct: 154 VSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE 196
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.4 bits (145), Expect = 7e-12
Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 14/123 (11%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + + GA+G + +Q GY V VRD + +E H+ ++L
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-------PRPAHVVVGDVL 56
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ D V G D V G N++ + K H + +VV
Sbjct: 57 QAADVDKTVAGQDAVIVLLGTR------NDLSPTTVMSEGARNIVAAM-KAHGVDKVVAC 109
Query: 129 SSI 131
+S
Sbjct: 110 TSA 112
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 60.2 bits (144), Expect = 2e-11
Identities = 38/215 (17%), Positives = 67/215 (31%), Gaps = 6/215 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF WL L G TVK +P L E + + ++
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT--APTVPSLFETARVADGMQSEIGDIR 66
Query: 69 EEGS---FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
++ A P++ LS + + VMGT+ +L + V +K V
Sbjct: 67 DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 126
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGI 185
V +S E + +P + + ++G
Sbjct: 127 VNITSDKCYDNKEWIWGYR-ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGT 185
Query: 186 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIY 220
+ + G VIG + +++
Sbjct: 186 AVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV 220
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 53.3 bits (126), Expect = 4e-09
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP----NSPKTEHLRELDGATERLH 61
G + + GA+G++ + K L G+ VR+ NS K + L +
Sbjct: 1 GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGAN 58
Query: 62 LFKANLLEEGSFDSAVDGCDGVFH 85
+ ++ + S AV D V
Sbjct: 59 IVHGSIDDHASLVEAVKNVDVVIS 82
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.0 bits (123), Expect = 1e-08
Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 21/233 (9%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGAT-ERLHL 62
+ V VTG +G++ S V LL+ GY E LR + T +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 63 FKANLLEEGSFDSAVDGCDGVFHT---ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
+ ++L++G+ + + S D + GT+ +L
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA- 121
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
H +K +V +SS + + + Y +K EE
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTN----------PYGKSKFFIEEMIRDL 171
Query: 180 AKEN-GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRIMIY 231
+ + + V + G + + I N + + AI R +
Sbjct: 172 CQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN 224
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.1 bits (114), Expect = 2e-07
Identities = 25/208 (12%), Positives = 58/208 (27%), Gaps = 32/208 (15%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
++V +TGA + + + + + + E + G ++H F +
Sbjct: 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE-ETAAKCKGLGAKVHTFVVDCS 66
Query: 69 EEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
S+ + + A S + D + V+ ++
Sbjct: 67 NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAF 126
Query: 117 AKVHSIK---RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 173
+ +V +S + + + F+ KTL +
Sbjct: 127 LPAMTKNNHGHIVTVASAAGH----VSVPFLLAYCSSKFAA----------VGFHKTLTD 172
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQ 201
E A + G+ + P V F +
Sbjct: 173 ELAAL--QITGVKTTCLCPNFVNTGFIK 198
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 48.1 bits (114), Expect = 2e-07
Identities = 29/203 (14%), Positives = 60/203 (29%), Gaps = 28/203 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VTGA + VK L G V A R L L + +L
Sbjct: 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN-----SDLVSLAKECPGIEPVCVDLG 60
Query: 69 EEGSFDSAVD---GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
+ + + A+ D + + A P + ++ + V + A+
Sbjct: 61 DWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDM 120
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFA 180
+ V + + ++ + T + L K +A E
Sbjct: 121 INRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA----------MTMLTKAMAMELG---- 166
Query: 181 KENGIDLVAIHPGTVIGPFFQPI 203
+ I + +++P V+ + +
Sbjct: 167 -PHKIRVNSVNPTVVLTDMGKKV 188
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 47.2 bits (111), Expect = 4e-07
Identities = 31/237 (13%), Positives = 66/237 (27%), Gaps = 29/237 (12%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
MS V VTGA+ + LV+ L++ + K L+ + + R+H
Sbjct: 1 MSP----GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS--RVH 54
Query: 62 LFKANLLEEGSFDSAVDG---------------CDGVFHTASPVIFLSDNPQADIVDPAV 106
+ + + S D+ V GV + + A+ +D
Sbjct: 55 VLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNT 114
Query: 107 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166
+ + + S + +T + + + Y
Sbjct: 115 TSVVLLTQKLLP-LLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYR 173
Query: 167 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF----GAEVILNLIN 216
++K A + + + +V PG V +++ N
Sbjct: 174 MSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFN 230
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (111), Expect = 5e-07
Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 15/226 (6%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATE 58
+ G + +V VTG + + +VK LL+ G V R K+ + L+ T+
Sbjct: 5 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64
Query: 59 --RLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
R+ + N+ E ++ V F + FL +N + PA + +
Sbjct: 65 QARVIPIQCNIRNEEEVNNLVKSTLDTFG---KINFLVNNGGGQFLSPAEHISSKGWHAV 121
Query: 117 AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN---KEWYSLAKTLAE 173
+ + + ++ + + E + +I T P+ Y+L K+LA
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLAL 181
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNI 219
E A +GI + + PG + + I
Sbjct: 182 EWA-----CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI 222
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (111), Expect = 5e-07
Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 49/235 (20%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGATERLHLFKA 65
+++ VTGASG + + + + L+Q+G V R + + + G L ++
Sbjct: 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRC 68
Query: 66 NLLEEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVL 113
+L E S G D + A ++ S + D+ + V+
Sbjct: 69 DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 128
Query: 114 RSCAKVHSIK-----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168
R + + ++ +S+ + +T +YS
Sbjct: 129 REAYQSMKERNVDDGHIININSMSGHRVLPLSVTH--------------------FYSAT 168
Query: 169 K--------TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
K L +E + A+ I I PG V F + + E
Sbjct: 169 KYAVTALTEGLRQE--LREAQ-THIRATCISPGVVETQFAFKLHDKDPEKAAATY 220
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 46.4 bits (108), Expect = 7e-07
Identities = 28/214 (13%), Positives = 54/214 (25%), Gaps = 16/214 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
V VTGASG + K L + A ++ E + +F ++
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG------GEADVFIGDIT 57
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ S + A G D + S V DP G + + +
Sbjct: 58 DADSINPAFQGIDALVILTSAV-----PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 112
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLV 188
+ VV + + L E + +
Sbjct: 113 KNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTII- 171
Query: 189 AIHPGTVIGP--FFQPILNFGAEVILNLINGNIY 220
G ++ + +L + +L +
Sbjct: 172 --RAGGLLDKEGGVRELLVGKDDELLQTDTKTVP 203
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.5 bits (106), Expect = 1e-06
Identities = 8/41 (19%), Positives = 13/41 (31%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEH 49
K V + GA+G L+ +L K +
Sbjct: 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP 43
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (106), Expect = 3e-06
Identities = 31/216 (14%), Positives = 63/216 (29%), Gaps = 39/216 (18%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KVV VTG + + +V+ + G V +D R L+ ++
Sbjct: 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE-----SGGRALEQELPGAVFILCDVT 61
Query: 69 EEGSFDSAVD-------GCDGVFHTA------SPVIFLSDNPQADIVDPAVMGTLNVLRS 115
+E + V D V + A S +++ ++GT + +
Sbjct: 62 QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKL 121
Query: 116 CAKVHSIK--RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 173
V+ SS+ ++ K LA
Sbjct: 122 ALPYLRKSQGNVINISSLVGA--------------IGQAQAVPYVATKGAVTAMTKALAL 167
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE 209
+ + G+ + I PG + P ++ + +
Sbjct: 168 DESPY-----GVRVNCISPGNIWTPLWEELAALMPD 198
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 44.9 bits (104), Expect = 3e-06
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V + G +GF+ + L + LL+ + + D S H + ++
Sbjct: 3 VLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDAISRFLNHP----HFHFVEGDISIH 57
Query: 71 GSF-DSAVDGCDGVFH 85
+ + V CD V
Sbjct: 58 SEWIEYHVKKCDVVLP 73
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 44.0 bits (103), Expect = 5e-06
Identities = 35/232 (15%), Positives = 61/232 (26%), Gaps = 29/232 (12%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV VTGA + + L +RG V + E + + KAN+
Sbjct: 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 78
Query: 69 EEGSFDSAVD-------GCDGVFHTAS-----PVIFLSDNPQADIVDPAVMGTLNVLRSC 116
+ D V + V ++ + G V R
Sbjct: 79 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 138
Query: 117 AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAA 176
K I ++ P + K E + A+ +A + A
Sbjct: 139 YKHLEIGGRLILMGSITGQAKAVP----------KHAVYSGSKGAIE--TFARCMAIDMA 186
Query: 177 WKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRI 228
+ I + + PG + + + NL N + A
Sbjct: 187 -----DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS 233
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 43.4 bits (100), Expect = 9e-06
Identities = 30/218 (13%), Positives = 60/218 (27%), Gaps = 24/218 (11%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTV---------------KATVRDPNSPKTEHLREL 53
V V G G+ L ++ Y V P + + +
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61
Query: 54 DGAT-ERLHLFKANLLEEGSFDSAVD------GCDGVFHTASPVIFLSDNPQADIVDPAV 106
T + + L+ ++ + + ++P + + V
Sbjct: 62 KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 121
Query: 107 MGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS--NPVLCKENKEW 164
+GTLNVL + + +V ++G + + K+ +
Sbjct: 122 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 181
Query: 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 202
Y L+K K GI ++ G V G
Sbjct: 182 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDE 219
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (101), Expect = 9e-06
Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 38/210 (18%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ V VTGA + V+ L G V A R L L + +L
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ-----ADLDSLVRECPGIEPVCVDLG 62
Query: 69 EEGSFDSAVD---GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH 120
+ + + A+ D + + A+ + ++ + + + V + A+
Sbjct: 63 DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL 122
Query: 121 SIK----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-YSLAKTLAEEA 175
+ +V SS + +N + K L K +A E
Sbjct: 123 IARGVPGAIVNVSSQCSQ---------------RAVTNHSVYCSTKGALDMLTKVMALEL 167
Query: 176 AWKFAKENGIDLVAIHPGTVIGPFFQPILN 205
+ I + A++P V+ Q +
Sbjct: 168 G-----PHKIRVNAVNPTVVMTSMGQATWS 192
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 42.8 bits (100), Expect = 1e-05
Identities = 32/204 (15%), Positives = 58/204 (28%), Gaps = 11/204 (5%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
M + E KVV +TG+S + + V R L E+
Sbjct: 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 62 LFKANLLEEGS----FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCA 117
K ++ E SA+ + + + ++ ++ + A
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGA 120
Query: 118 KVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAW 177
+ S + + + I F + K + +TLA E A
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLM--TETLALEYA- 177
Query: 178 KFAKENGIDLVAIHPGTVIGPFFQ 201
GI + I PG + P
Sbjct: 178 ----PKGIRVNNIGPGAINTPINA 197
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 42.8 bits (100), Expect = 1e-05
Identities = 39/230 (16%), Positives = 73/230 (31%), Gaps = 30/230 (13%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
+S K + VTG + + + + G V R + +
Sbjct: 5 ISFVN--KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTK 62
Query: 62 LFKANLLEEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGT 109
++ ++ + G+ A P L+ A + D V G
Sbjct: 63 AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGV 122
Query: 110 LNVLRSCAKVHSIK----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165
N R+ AK+ K +V+TSS+ + ++N++ + +
Sbjct: 123 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG-------SLTQVFYNSSKAACS 175
Query: 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
+L K LA E A GI + A+ PG V + + + I
Sbjct: 176 NLVKGLAAEWA-----SAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNI 220
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 42.7 bits (100), Expect = 1e-05
Identities = 26/202 (12%), Positives = 61/202 (30%), Gaps = 18/202 (8%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKAN 66
K V +TG+S + + + G V T R+ + + + + + E+++ A+
Sbjct: 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64
Query: 67 LLEEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV 119
+ E D ++ D + + A + D T +
Sbjct: 65 VTEASGQDDIINTTLAKFGKIDILVNNAGANLA-DGTANTDQPVELYQKTFKLNFQAVIE 123
Query: 120 HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKF 179
+ K + ++ V + P + A +
Sbjct: 124 MTQKTKEHLIKTKGEI---VNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI--- 177
Query: 180 AKENGIDLVAIHPGTVIGPFFQ 201
++G+ + ++ PG V F
Sbjct: 178 --QHGVRVNSVSPGAVATGFMG 197
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 42.4 bits (99), Expect = 2e-05
Identities = 34/223 (15%), Positives = 67/223 (30%), Gaps = 43/223 (19%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++KV +TG +G + KL ++ G V D + + G+ + + +
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIA--DIADDHGQKVCNNIGSPDVISFVHCD 62
Query: 67 LLEEGSFDSAVDGC-------DGVFHTASPVIF-------LSDNPQADIVDPAVMGTLNV 112
+ ++ + VD D +F + + ++D V G V
Sbjct: 63 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122
Query: 113 LRSCAKVHSIKR---VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK 169
+ A+V + +V T+SI + E Y+ K
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSH---------------------VYTATK 161
Query: 170 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAE 209
E GI + + P V P + +
Sbjct: 162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 204
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 42.3 bits (99), Expect = 2e-05
Identities = 33/215 (15%), Positives = 61/215 (28%), Gaps = 35/215 (16%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV VTG + V +VKLLL G V + D N + L G ER + ++
Sbjct: 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFS--DINEAAGQQLAAELG--ERSMFVRHDVS 62
Query: 69 EEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
E + + + + + A + + ++ +
Sbjct: 63 SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122
Query: 117 AKVHSIK--RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEE 174
++ +S+ + L +L + A
Sbjct: 123 IAAMKETGGSIINMASVSSWL--------------PIEQYAGYSASKAAVSALTRAAALS 168
Query: 175 AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE 209
+ I + +IHP + P Q L G
Sbjct: 169 CRK---QGYAIRVNSIHPDGIYTPMMQASLPKGVS 200
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 42.4 bits (99), Expect = 2e-05
Identities = 34/233 (14%), Positives = 65/233 (27%), Gaps = 31/233 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV TGA + + L +RG +V + E + EL + +A++
Sbjct: 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS 66
Query: 69 EEGSFDSAVD-------GCDGVFH-----TASPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
+ + D G D V + ++ + + G V +
Sbjct: 67 KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 126
Query: 117 AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE-WYSLAKTLAEEA 175
K ++ +S A ++ P N L +K + A +
Sbjct: 127 LKHCRRGGRIILTSSIAAVMTGIP-------------NHALYAGSKAAVEGFCRAFAVDC 173
Query: 176 AWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQDRI 228
G+ + I PG V F A + + +
Sbjct: 174 G-----AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN 221
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (97), Expect = 2e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEH 49
K V + GASG L+K +L++G K T+ +
Sbjct: 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE 55
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 42.0 bits (98), Expect = 2e-05
Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 35/219 (15%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + VTGA+ + + L + G ++ A R+ E + L+ A++
Sbjct: 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA-EAVAALEA---EAIAVVADVS 61
Query: 69 EEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
+ + ++ GV H A + L ++ + G+ V R
Sbjct: 62 DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKA 121
Query: 117 AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAA 176
+V ++ + A L F LA+TLA E A
Sbjct: 122 GEVLEEGGSLVLTGSVAGL--------------GAFGLAHYAAGKLGVVGLARTLALELA 167
Query: 177 WKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
G+ + + PG + P + + E +
Sbjct: 168 -----RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGAS 201
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (98), Expect = 2e-05
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 28/207 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGATERLHLFKANL 67
KV VTGA+ + + LL +G V + + + + ++ + ++
Sbjct: 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV 63
Query: 68 LEEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADI-VDPAVMGTLNVLRSCAKV 119
++ D + + A + I + + GT L +K
Sbjct: 64 ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQ 123
Query: 120 HS--IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAW 177
+ ++ SS+ ++ PV C ++ A A
Sbjct: 124 NGGEGGIIINMSSLAGLM--------------PVAQQPVYCASKHGIVGFTRSAALAANL 169
Query: 178 KFAKENGIDLVAIHPGTVIGPFFQPIL 204
+G+ L AI PG V + I
Sbjct: 170 ---MNSGVRLNAICPGFVNTAILESIE 193
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 41.4 bits (97), Expect = 3e-05
Identities = 29/212 (13%), Positives = 65/212 (30%), Gaps = 37/212 (17%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++K+ +TG + + + + G + P +R L R+ K +
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR---RVLTVKCD 60
Query: 67 LLEEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLR 114
+ + G ++ CD + + A P L+ + V + +
Sbjct: 61 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120
Query: 115 SCAKVHSIK---RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTL 171
+ R++ +S L E +++ + K + L
Sbjct: 121 AFVPGMKRNGWGRIINLTSTTYWLKIE------------AYTHYISTKAA--NIGFTRAL 166
Query: 172 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203
A + ++GI + AI P V +
Sbjct: 167 ASDLG-----KDGITVNAIAPSLVRTATTEAS 193
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 41.7 bits (97), Expect = 3e-05
Identities = 32/216 (14%), Positives = 61/216 (28%), Gaps = 21/216 (9%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ER 59
M+ G KV VTG++ + + L +G + + + L +
Sbjct: 1 MLKG----KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK 56
Query: 60 LHLFKANLLEEGSFDSAVD------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVL 113
+ A+L + + VD G + + + + + LN+
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 114 RSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 173
+ + G ++ + + K A
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGL-----VASANKSAYVAAKHGVVGFTKVTAL 171
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE 209
E A GI AI PG V P + ++ AE
Sbjct: 172 ETA-----GQGITANAICPGWVRTPLVEKQISALAE 202
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 41.6 bits (95), Expect = 4e-05
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRD-PNSPKTEHLRELD 54
+ VTG +GF+ S +VK L +G T V + + K +L +L+
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN 46
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 41.1 bits (96), Expect = 4e-05
Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 27/209 (12%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV +TG + + + ++ G V T R +S E + G +++ F+ +
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGR--HSDVGEKAAKSVGTPDQIQFFQHDSS 64
Query: 69 EEGSFDSAVD-------GCDGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSC 116
+E + D + + A + + ++ + G R
Sbjct: 65 DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124
Query: 117 AKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAA 176
+ K +GA ++N + S ++K+ A + A
Sbjct: 125 IQRMKNKG------LGASIIN----MSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 177 WKFAKENGIDLVAIHPGTVIGPFFQPILN 205
K+ + + +HPG + P +
Sbjct: 175 L---KDYDVRVNTVHPGYIKTPLVDDLPG 200
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.1 bits (96), Expect = 4e-05
Identities = 27/213 (12%), Positives = 67/213 (31%), Gaps = 34/213 (15%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKAN 66
K V +TG+S + L Q G V T R + + + + + ++++ A+
Sbjct: 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65
Query: 67 LLEEGSFDSAVD-------GCDGVFHTASPVIF------LSDNPQAD---IVDPAVMGTL 110
+ E D ++ D + + A I +D + + +
Sbjct: 66 VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125
Query: 111 NVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKT 170
+ + H + ++ +++ + + ++
Sbjct: 126 EMTKKVKP-HLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAA----------LDQYTRS 174
Query: 171 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203
A + A + GI + ++ PG V F +
Sbjct: 175 TAIDLA-----KFGIRVNSVSPGMVETGFTNAM 202
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.1 bits (96), Expect = 5e-05
Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 36/216 (16%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFK 64
EKV +TG+S + L + G V T R + + + + + ++
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63
Query: 65 ANLLEEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADIVDPA---------VMG 108
A++ + D + D + + A I S + +
Sbjct: 64 ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123
Query: 109 TLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-YSL 167
+ + + S + E + + K
Sbjct: 124 VIALTKKAVPHLSSTK------------GEIVNISSIASGLHATPDFPYYSIAKAAIDQY 171
Query: 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203
+ A + ++GI + +I PG V F +
Sbjct: 172 TRNTAIDLI-----QHGIRVNSISPGLVATGFGSAM 202
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 40.8 bits (95), Expect = 5e-05
Identities = 34/219 (15%), Positives = 64/219 (29%), Gaps = 24/219 (10%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLH 61
SG KV V+G + + + V+ ++ G V E + + +
Sbjct: 1 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD-----EEGKAMAAELADAAR 55
Query: 62 LFKANLLEEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLR 114
++ + + +AVD G + + A L+ D + +
Sbjct: 56 YVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNA---GILNIGTIEDY-ALTEWQRILDVN 111
Query: 115 SCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEE 174
I+ VV + + + K L K+ A E
Sbjct: 112 LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA--VRGLTKSTALE 169
Query: 175 AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILN 213
+GI + +IHPG V P + + L
Sbjct: 170 LG-----PSGIRVNSIHPGLVKTPMTDWVPEDIFQTALG 203
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 40.6 bits (94), Expect = 6e-05
Identities = 37/211 (17%), Positives = 58/211 (27%), Gaps = 14/211 (6%)
Query: 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLFK 64
E+ VTG + + L RGY V ++ E D E R + +
Sbjct: 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYV-EGDVTREEDVRRAVAR 59
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
A + G +++ ++GT NVLR A
Sbjct: 60 AQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENP 119
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
G ++ T V E +L A E A G
Sbjct: 120 PDAEGQRGVIV-----NTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA-----GWG 169
Query: 185 IDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
I +V + PG P Q + + +
Sbjct: 170 IRVVTVAPGLFDTPLLQGLPEKAKASLAAQV 200
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 40.8 bits (95), Expect = 6e-05
Identities = 27/208 (12%), Positives = 51/208 (24%), Gaps = 38/208 (18%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V A G + + L++R + +P + + ++
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 65
Query: 69 EEGS-----FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK 123
+ D V + L D+ + G +N + +
Sbjct: 66 VPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKR 125
Query: 124 ------RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK----TLAE 173
+ S+ N P YS +K +
Sbjct: 126 KGGPGGIIANICSVTGF--NAIHQVPV--------------------YSASKAAVVSFTN 163
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQ 201
A K A G+ +I+PG P
Sbjct: 164 SLA-KLAPITGVTAYSINPGITRTPLVH 190
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 41.0 bits (94), Expect = 6e-05
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRD 41
+ +TGA+G + + K L + V T
Sbjct: 4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 40.5 bits (94), Expect = 7e-05
Identities = 32/225 (14%), Positives = 74/225 (32%), Gaps = 40/225 (17%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VV VTGAS + + L + G V E ++++ + F ++
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 69 EEGSFDSAVD------------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
+E ++ + + + +I + + +++D + G ++
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 117 AKVHSIK---RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 173
K+ K R++ +S+ ++ N + Y+ AK
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGN----------------------IGQANYAAAKAGVI 159
Query: 174 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
+ A+E I++ + PG + + + IL I
Sbjct: 160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI 204
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 40.3 bits (92), Expect = 9e-05
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43
+ + G +G V L + L G + V
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.0 bits (93), Expect = 1e-04
Identities = 24/210 (11%), Positives = 56/210 (26%), Gaps = 30/210 (14%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG + + +V+ G + R+ E L + ++ +
Sbjct: 9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN-ECLSKWQKKGFQVTGSVCDAS 67
Query: 69 EEGSFDSAVDGC--------DGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLRS 115
+ + D + + P + + + + + ++ +
Sbjct: 68 LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQL 127
Query: 116 CAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEA 175
+ A + + + LA+ LA E
Sbjct: 128 AHPLLK-----------ASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEW 176
Query: 176 AWKFAKENGIDLVAIHPGTVIGPFFQPILN 205
A GI A+ P + P + + +
Sbjct: 177 ASD-----GIRANAVAPAVIATPLAEAVYD 201
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 1e-04
Identities = 46/222 (20%), Positives = 79/222 (35%), Gaps = 39/222 (17%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKT--EHLRELDGATERLHLF 63
VV +TG S + L L + V AT+RD + E R L L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 64 KANLLEEGSFDSAVDGCDGVF----------HTASPVIFLSDNPQADIVDPAVMGTLNVL 113
+ ++ + S +A + P+ L ++ A ++D V+GT+ +L
Sbjct: 63 QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122
Query: 114 RSCAKVHSIKR----VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAK 169
++ +R V++T S+G ++ N V C L +
Sbjct: 123 QAFLP-DMKRRGSGRVLVTGSVGGLM--------------GLPFNDVYCASKFALEGLCE 167
Query: 170 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVI 211
+LA G+ L I G V F + +L EV+
Sbjct: 168 SLAVLLLPF-----GVHLSLIECGPVHTAFMEKVLGSPEEVL 204
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 39.6 bits (92), Expect = 1e-04
Identities = 21/202 (10%), Positives = 52/202 (25%), Gaps = 16/202 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K +TGA + + G +V + + ++ + E+ + + ++
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDIT 70
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGT-----LNVLRSCAKVHSIK 123
E + D V L +N A P
Sbjct: 71 SEQELSAL---ADFAISKLGKVDILVNN--AGGGGPKPFDMPMADFRRAYELNVFSFFHL 125
Query: 124 RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183
++ + + + + L + +A + E
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-----EK 180
Query: 184 GIDLVAIHPGTVIGPFFQPILN 205
I + I PG ++ + ++
Sbjct: 181 NIRVNGIAPGAILTDALKSVIT 202
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 39.4 bits (91), Expect = 1e-04
Identities = 28/207 (13%), Positives = 64/207 (30%), Gaps = 19/207 (9%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K +TG++ + + ++ G V + + + E+ ++
Sbjct: 6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAAR-ATAAEIGP---AACAIALDVT 61
Query: 69 EEGSFDSAVD------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI 122
++ S D V G + + + L+ + + +NV + + ++
Sbjct: 62 DQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAV 121
Query: 123 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 182
R ++ G V C SL ++
Sbjct: 122 ARAMIAGGRGGK----IINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI-----R 172
Query: 183 NGIDLVAIHPGTVIGPFFQPILNFGAE 209
+GI++ AI PG V G + + A+
Sbjct: 173 HGINVNAIAPGVVDGEHWDGVDAKFAD 199
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 39.3 bits (91), Expect = 1e-04
Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 11/205 (5%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+V VTGA+ + + + L + G V R + L+EL A ++
Sbjct: 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR-TTLKELREAGVEADGRTCDVR 61
Query: 69 EEGS----FDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKR 124
+ V+ V + A++ D + + + K+
Sbjct: 62 SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG-VFRVTKQ 120
Query: 125 VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENG 184
V+ + + K L E A G
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-----RTG 175
Query: 185 IDLVAIHPGTVIGPFFQPILNFGAE 209
I + A+ PG V P + ++
Sbjct: 176 ITVNAVCPGFVETPMAASVREHYSD 200
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 39.1 bits (91), Expect = 2e-04
Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 41/216 (18%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG + + + + + G V P E + GA F+ +L
Sbjct: 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE--GKEVAEAIGGAF-----FQVDLE 58
Query: 69 EEGSFDSAVD-------GCDGVFHTA-----SPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
+E V+ D + + A + + +++ + +++
Sbjct: 59 DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALA 118
Query: 117 AKVHSIKR---VVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAE 173
A+ +V +S+ + N +L ++LA
Sbjct: 119 AREMRKVGGGAIVNVASVQGLF--------------AEQENAAYNASKGGLVNLTRSLAL 164
Query: 174 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAE 209
+ A I + A+ PG + + +
Sbjct: 165 DLA-----PLRIRVNAVAPGAIATEAVLEAIALSPD 195
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 38.8 bits (90), Expect = 2e-04
Identities = 29/213 (13%), Positives = 55/213 (25%), Gaps = 36/213 (16%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VTG S + +V+ L G +V R+ + L + ++ +L
Sbjct: 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-DCLTQWRSKGFKVEASVCDLS 67
Query: 69 EEGSFDSAVDGCDGVFH-------------TASPVIFLSDNPQADIVDPAVMGTLNVLR- 114
++ FH + + I+ ++
Sbjct: 68 SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVL 127
Query: 115 --SCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLA 172
K VV SS+ L V L + LA
Sbjct: 128 AHPFLKASERGNVVFISSVSGAL--------------AVPYEAVYGATKGAMDQLTRCLA 173
Query: 173 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN 205
E A ++ I + + PG + + +
Sbjct: 174 FEWA-----KDNIRVNGVGPGVIATSLVEMTIQ 201
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (89), Expect = 3e-04
Identities = 33/209 (15%), Positives = 63/209 (30%), Gaps = 23/209 (11%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M+ G K V VTGAS + + L + G V T R + + L+
Sbjct: 11 MLQG----KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 66
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH 120
H + + + V + +I N + ++ +R +V+
Sbjct: 67 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLIL---NHITNTSLNLFHDDIHHVRKSMEVN 123
Query: 121 SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS--------LAKTLA 172
+ VVLT + ML V + P++ YS ++
Sbjct: 124 FLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVA-----AYSASKFALDGFFSSIR 178
Query: 173 EEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201
+E + + + G +
Sbjct: 179 KEYS---VSRVNVSITLCVLGLIDTETAM 204
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 38.3 bits (88), Expect = 3e-04
Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 12/172 (6%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V +G V LL G V + K + + ++++ A
Sbjct: 24 KKAVVLAGTGPVGMRSAALLAGEGAEVV--LCGRKLDKAQAAADSVNKRFKVNVTAAETA 81
Query: 69 EEGSFDSAVDGCDGVFHTAS-PVIFLSDNPQADIVDPAVMGTLN-----VLRSCAKVHSI 122
++ S AV G VF + + L + ++ N +
Sbjct: 82 DDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKG 141
Query: 123 KRVVLTSSIGAMLLNETPM--TPDVVIDETWFSNPVLCKENKEWYSLAKTLA 172
K + GA+ + + + S V E Y LAK +A
Sbjct: 142 KEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGVFDAEEI--YKLAKEMA 191
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 37.7 bits (87), Expect = 5e-04
Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 17/212 (8%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++K V +TGA+ + ++L + G + A + E GA H +
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEG--PLREAAEAVGA----HPVVMD 57
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVV 126
+ + S + + + + L +V+ +
Sbjct: 58 VADPASVERGFAEALAHL---GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFL 114
Query: 127 LTSSIGAMLLNETPMTPD---VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN 183
+ + + + P + + L +TLA E
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELG-----RW 169
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
GI + + PG + + E +
Sbjct: 170 GIRVNTLAPGFIETRMTAKVPEKVREKAIAAT 201
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 37.3 bits (86), Expect = 7e-04
Identities = 31/215 (14%), Positives = 62/215 (28%), Gaps = 45/215 (20%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANL 67
+ V +TG + + LV + G V + E L EL + + ++
Sbjct: 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA-----ERLAELETDHGDNVLGIVGDV 60
Query: 68 LEEGSFDSAVD-------------GCDGVFHTASPVIFL----SDNPQADIVDPAVMGTL 110
A G++ ++ ++ L D ++ V G +
Sbjct: 61 RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI 120
Query: 111 NVLRSCAK--VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168
+ +++C V S V+ T S P + + L
Sbjct: 121 HAVKACLPALVASRGNVIFTISNAGF----YPNGGGPLYTAAKHA----------IVGLV 166
Query: 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203
+ LA E A + + + G + P
Sbjct: 167 RELAFELAP------YVRVNGVGSGGINSDLRGPS 195
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 37.4 bits (86), Expect = 7e-04
Identities = 34/189 (17%), Positives = 54/189 (28%), Gaps = 11/189 (5%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VTG S + +V+ L G V R+ E L + +LL
Sbjct: 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSVCDLL 65
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
D + VF + L +N I A T + +
Sbjct: 66 SRTERDKLMQTVAHVFD--GKLNILVNNAGVVIHKEAKDFTEKDYNII--MGTNFEAAYH 121
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS------LAKTLAEEAAWKFAKE 182
S A L + +V+ + L + S + K+LA E A +
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181
Query: 183 NGIDLVAIH 191
N + I
Sbjct: 182 NSVAPGVIL 190
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 36.9 bits (85), Expect = 0.001
Identities = 28/204 (13%), Positives = 54/204 (26%), Gaps = 17/204 (8%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+V VTG S + + + L + G +V R+ + + F+ ++
Sbjct: 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS 65
Query: 69 EEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS 121
++ D V + A +P + + V
Sbjct: 66 NYEEVKKLLEAVKEKFGKLDTVVNAAG---INRRHPAEEFPLDEFRQVIEVNLFGTYYVC 122
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
+ L + + S K L K LA+E
Sbjct: 123 REAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVAS--LTKALAKEWG----- 175
Query: 182 ENGIDLVAIHPGTVIGPFFQPILN 205
GI + I PG + + +
Sbjct: 176 RYGIRVNVIAPGWYRTKMTEAVFS 199
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 36.9 bits (85), Expect = 0.001
Identities = 39/234 (16%), Positives = 70/234 (29%), Gaps = 45/234 (19%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
GE KV VTGA + + K+L + V R S + E+
Sbjct: 5 YYCGEN--KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYES 61
Query: 61 HLFKANLLEEGSFDSAVDG--------CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNV 112
+ ++ ++ ++ V + L + D + + LN
Sbjct: 62 SGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNS 121
Query: 113 LRSCAKVHSIK-------RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165
L + S + R++ SSI + N + Y
Sbjct: 122 LFYITQPISKRMINNRYGRIINISSIVGLTGN----------------------VGQANY 159
Query: 166 SLAK----TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
S +K + A + A I + AI PG + I + I++ I
Sbjct: 160 SSSKAGVIGFTKSLAKELASR-NITVNAIAPGFISSDMTDKISEQIKKNIISNI 212
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 36.7 bits (83), Expect = 0.002
Identities = 25/231 (10%), Positives = 61/231 (26%), Gaps = 16/231 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQR-GYTV----KATVRDPNSPKTEHLRELDGATERLHLFKA 65
V V G +G++ S V+ LL+ ++V S E + ++ K
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
+ + D + F + + +G +++ +
Sbjct: 65 PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW-----------YSLAKTLAEE 174
+ + + + + + + Y +K +AE
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184
Query: 175 AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGNIYSAAIQ 225
A+ GI + + G + + +LI +
Sbjct: 185 MIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD 235
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 36.3 bits (83), Expect = 0.002
Identities = 29/207 (14%), Positives = 61/207 (29%), Gaps = 13/207 (6%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV +TG + + LL G R + K + ++H + ++
Sbjct: 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 85
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128
+ + V V + +N + + P + N ++ + +T
Sbjct: 86 DPDMVQNTVSELIKVAG---HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 142
Query: 129 SSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY-----SLAKTLAEEAAWKFAKEN 183
IG L+ + I + +++K+LA E +
Sbjct: 143 LEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-----KY 197
Query: 184 GIDLVAIHPGTVIGPFFQPILNFGAEV 210
G+ I PG + L+
Sbjct: 198 GMRFNVIQPGPIKTKGAFSRLDPTGTF 224
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 35.5 bits (81), Expect = 0.003
Identities = 25/213 (11%), Positives = 56/213 (26%), Gaps = 28/213 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE--RLHLFKAN 66
+ V VTG + + + + L G+ V T R +PK E+D F A
Sbjct: 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAV 67
Query: 67 LLEEGSFD----SAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI 122
+G + +A D + F + + +
Sbjct: 68 EEHQGPVEVLVSNAGLSADAFLMRMTEEKF---EKVINANLTGAFRVAQRASRSMQRNKF 124
Query: 123 KRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE 182
R++ S+ + + + + + + +
Sbjct: 125 GRMIFIGSVSGL----WGIGNQANYAASKAGVIGMARS---------------IARELSK 165
Query: 183 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
+ + PG + + + + L I
Sbjct: 166 ANVTANVVAPGYIDTDMTRALDERIQQGALQFI 198
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 35.5 bits (81), Expect = 0.003
Identities = 29/207 (14%), Positives = 62/207 (29%), Gaps = 18/207 (8%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE-RLHLFKA 65
++VV +TG + L G + + L+ A + + A
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62
Query: 66 NLLEEGSFDSAVD-------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAK 118
++ +E ++ V DG F+ A + + + ++N+
Sbjct: 63 DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 122
Query: 119 VHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWK 178
+ + +++ G + T V + L + A E
Sbjct: 123 LEKVLKIMREQGSGMV-----VNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG-- 175
Query: 179 FAKENGIDLVAIHPGTVIGPFFQPILN 205
GI + AI PG + P + +
Sbjct: 176 ---RYGIRINAIAPGAIWTPMVENSMK 199
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 35.2 bits (80), Expect = 0.003
Identities = 31/227 (13%), Positives = 61/227 (26%), Gaps = 33/227 (14%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLFKA 65
E + V V G G + S V+ R + V + N + ++ +
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVT 60
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKV----HS 121
+ + D VD V + S + + S
Sbjct: 61 AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE 120
Query: 122 IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAK 181
+ L + A+ + + L ++LA + +
Sbjct: 121 GGLLTLAGAKAAL--------------DGTPGMIGYGMAKGAVHQLCQSLAGKNS---GM 163
Query: 182 ENGIDLVAIHPGTVIGPFFQ---PILNFG--------AEVILNLING 217
+G +A+ P T+ P + P +F E + I G
Sbjct: 164 PSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITG 210
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 35.0 bits (80), Expect = 0.004
Identities = 27/202 (13%), Positives = 48/202 (23%), Gaps = 30/202 (14%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VT F L + G+TV + EL+ E + + E
Sbjct: 5 VTNVKHFGGMGSALRLSEAGHTVACHDESF-----KQKDELEAFAETYP--QLKPMSEQE 57
Query: 73 FDSAVD-------GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRV 125
++ D + + P G + L+
Sbjct: 58 PAELIEAVTSAYGQVDVLVSND--IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115
Query: 126 VLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE--- 182
++ I + P + Y+ A+ A A +KE
Sbjct: 116 -----------SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGE 164
Query: 183 NGIDLVAIHPGTVIGPFFQPIL 204
I + AI P +
Sbjct: 165 YNIPVFAIGPNYLHSEDSPYFY 186
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 35.0 bits (80), Expect = 0.004
Identities = 31/224 (13%), Positives = 57/224 (25%), Gaps = 42/224 (18%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V +TG + + + + + G V REL ++
Sbjct: 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATARELGD---AARYQHLDVT 61
Query: 69 EEGSFDSAVD-------GCDGVFH-----TASPVIFLSDNPQADIVDPAVMGTLNVLRSC 116
E + V DG+ + T + S +V+ + G +++
Sbjct: 62 IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV 121
Query: 117 AKVHSIK----RVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY-SLAKTL 171
+V SS + + +K L+K
Sbjct: 122 IP-AMKDAGGGSIVNISSAAGL---------------MGLALTSSYGASKWGVRGLSKLA 165
Query: 172 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI 215
A E I + ++HPG P E
Sbjct: 166 AVELGTDR-----IRVNSVHPGMTYTPMTAETGIRQGEGNYPNT 204
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 232 | |||
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.98 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.98 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.98 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.98 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.98 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.98 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.97 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.97 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.97 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.97 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.97 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.97 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.97 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.97 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.97 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.97 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.97 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.97 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.97 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.97 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.97 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.97 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.97 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.97 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.97 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.97 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.96 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.96 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.96 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.96 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.96 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.96 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.96 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.95 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.95 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.95 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.94 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.94 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.93 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.93 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.92 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.92 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.91 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.91 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.9 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.9 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.9 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.9 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.89 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.87 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.85 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.85 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.81 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.81 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.81 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.81 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.8 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.76 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.7 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.68 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.55 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.46 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.45 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.43 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.37 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.37 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.36 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.23 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 98.22 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 98.19 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.15 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.14 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 98.13 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 98.12 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.11 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 98.08 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 98.08 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.07 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 98.05 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 98.0 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.0 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.99 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.98 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.98 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.97 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.96 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.95 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.94 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.94 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.93 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.89 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.85 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.83 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.82 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.76 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.71 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.6 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.59 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.57 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.56 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.53 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.5 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.5 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.48 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.47 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.44 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.37 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.33 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.32 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.31 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.18 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.16 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.12 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.11 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.08 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.07 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.06 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.04 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.02 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.98 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.78 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.73 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.72 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 96.69 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.69 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.68 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 96.68 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.67 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.66 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.66 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.65 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.64 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.61 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.56 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.5 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.44 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.39 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.39 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.37 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.32 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.31 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.29 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.22 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.15 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.13 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.12 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 96.11 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.1 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.06 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.05 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.98 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.98 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.98 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.97 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.9 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 95.82 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.81 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.75 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.68 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.67 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.64 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 95.55 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 95.55 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.5 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.48 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.42 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.39 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.37 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.35 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.31 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.3 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.17 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.09 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.08 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.03 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 95.01 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.94 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.93 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.92 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.73 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.69 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.66 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.63 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.56 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.49 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.47 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.44 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 94.43 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.31 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 94.29 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.27 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.24 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.24 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 94.21 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.18 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.14 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.03 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 93.98 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 93.96 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 93.9 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 93.71 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 93.71 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 93.59 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.48 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 93.45 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.39 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.35 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 93.3 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 93.01 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 92.88 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 92.83 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 92.82 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 92.18 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 91.8 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 91.72 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 91.65 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.53 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 91.5 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.48 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.41 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 91.37 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 91.32 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.07 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 91.06 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 90.98 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 90.57 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 90.27 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.17 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 90.02 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 89.85 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 89.8 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 89.71 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 89.52 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 89.44 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 89.29 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 89.25 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 89.11 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.07 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 88.92 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 88.9 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 88.76 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 88.74 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.6 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.38 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 88.36 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 88.19 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 88.08 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 87.61 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 87.26 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 87.25 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 86.76 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 86.67 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 86.42 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 86.2 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 85.99 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 85.92 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 85.85 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 85.74 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 85.72 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 85.34 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 85.1 | |
| d1vlva2 | 161 | Ornithine transcarbamoylase {Thermotoga maritima [ | 85.0 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 85.0 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 84.84 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 84.68 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 83.89 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 83.62 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 83.49 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 83.29 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 83.29 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 83.26 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 83.25 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 82.95 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 82.76 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 82.71 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 82.58 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 82.52 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.51 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 82.39 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 82.33 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 82.24 | |
| d1ml4a2 | 157 | Aspartate carbamoyltransferase catalytic subunit { | 81.55 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 81.49 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 81.31 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 81.27 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 81.12 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 81.1 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 80.81 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.68 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 80.5 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 80.47 | |
| d1pg5a2 | 153 | Aspartate carbamoyltransferase catalytic subunit { | 80.06 |
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.5e-34 Score=231.43 Aligned_cols=177 Identities=20% Similarity=0.204 Sum_probs=144.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
++++|++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....++.++++|++|+++++++++
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~-~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 85 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 85 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999999999876543 3445555556789999999999999998876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++++++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~---------- 155 (251)
T d2c07a1 86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG---------- 155 (251)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------
T ss_pred CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC----------
Confidence 679999999842 335567899999999999999999988864 4589999999988765443
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
...|+.||++.+.+++.++.+ +|||||+|+||+|.||+.+...
T Consensus 156 ------------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~ 201 (251)
T d2c07a1 156 ------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS 201 (251)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC
T ss_pred ------------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC
Confidence 245888998888888888877 5899999999999999876543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=2.1e-33 Score=224.17 Aligned_cols=173 Identities=15% Similarity=0.135 Sum_probs=138.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|++.+. ..+.+.....++.++++|++|+++++++++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~---~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE---AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH---HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH---HHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 48899999999999999999999999999999999987532 222233335688999999999999998865
Q ss_pred -CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.|.| +.++||++||..+..+.+.
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---------- 148 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---------- 148 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS----------
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc----------
Confidence 67999999984 3346778999999999999999999998875 4579999999987755433
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+++.++.+ +|||||+|+||+|.||+.+.
T Consensus 149 ------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~ 192 (247)
T d2ew8a1 149 ------------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA 192 (247)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------
T ss_pred ------------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc
Confidence 244888888888888888776 58999999999999998643
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=1e-33 Score=227.68 Aligned_cols=178 Identities=20% Similarity=0.156 Sum_probs=147.2
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|..+|+||++|||||++|||+++++.|+++|++|++++|+.+.......+++.....++.++++|++|+++++++++
T Consensus 1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (261)
T d1geea_ 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 55679999999999999999999999999999999999987543334455555556788999999999999988875
Q ss_pred ----CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---C-ccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---S-IKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.+.| + .++||++||..+..+.+.
T Consensus 81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~------ 154 (261)
T d1geea_ 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL------ 154 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT------
T ss_pred HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc------
Confidence 57999999984 3346778999999999999999999998864 2 346999999977654432
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +||||++|+||+|.||+..
T Consensus 155 ----------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~ 197 (261)
T d1geea_ 155 ----------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA 197 (261)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH
T ss_pred ----------------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh
Confidence 244888888888888888877 5999999999999999853
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.3e-33 Score=232.72 Aligned_cols=212 Identities=20% Similarity=0.179 Sum_probs=161.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhh----hhcCCCCceEEEEcCCCCcchHHHhhcC--CCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR----ELDGATERLHLFKANLLEEGSFDSAVDG--CDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 82 (232)
|++|||||+|+||++++++|++.|++|++++|..+......++ +......+++++++|++|.+++.+++++ +|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 7899999999999999999999999999999965422111111 1222346899999999999999999984 599
Q ss_pred EEEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 83 VFHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 83 vi~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
|||+|+... ..+.+++...+++|+.||.++++++.+.. +..|+|++||+ .+|+.+. ..+.+|+....|
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~-~vYG~~~----~~~~~E~~~~~P---- 152 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQ----EIPQKETTPFYP---- 152 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCC----SSSBCTTSCCCC----
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch-hhhCCCC----CCCcCCCCCCCC----
Confidence 999998653 34567788899999999999999998862 34589999998 5565443 445667665443
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
.++|+.||.++|.+++.+++.++++++++||++|+||...... ..+...+.....+. .++++.+.|||+|
T Consensus 153 --~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~ 228 (357)
T d1db3a_ 153 --RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH 228 (357)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred --CChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeeccee
Confidence 3679999999999999999999999999999999999865443 23445555555555 5689999999997
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.5e-33 Score=223.11 Aligned_cols=173 Identities=21% Similarity=0.208 Sum_probs=143.8
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
|+.|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++ ..+..++++|++|+++++++++
T Consensus 1 ~G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (244)
T d1nffa_ 1 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK-AMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVT 76 (244)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---hCcceEEEeecCCHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999875432 233333 3578899999999999988875
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.++|++++++|+.+++++++.+.+.+ +.++||++||..+..+.+.
T Consensus 77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-------- 148 (244)
T d1nffa_ 77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA-------- 148 (244)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc--------
Confidence 579999999853 345678899999999999999999887764 4579999999987755432
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++.+.+++.++.+ +|||||+|+||+|.||+.+
T Consensus 149 --------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~ 191 (244)
T d1nffa_ 149 --------------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD 191 (244)
T ss_dssp --------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred --------------ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh
Confidence 245888888888888888877 5999999999999998864
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1e-33 Score=227.86 Aligned_cols=176 Identities=18% Similarity=0.113 Sum_probs=141.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+|+||++|||||++|||++++++|+++|++|++++|+.....++..+++. ....++.++++|++|+++++++++
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999986432222222222 224678999999999999999876
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~--------- 151 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN--------- 151 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC---------
Confidence 57999999984 3446778999999999999999999998875 4579999999988765433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +||||++|+||+|.||+.+.
T Consensus 152 -------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~ 195 (260)
T d1x1ta1 152 -------------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK 195 (260)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred -------------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh
Confidence 245889999988888888887 58999999999999998643
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-34 Score=227.59 Aligned_cols=173 Identities=20% Similarity=0.235 Sum_probs=144.6
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++ ..+...+++|++|+++++++++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQ-AISDYL---GANGKGLMLNVTDPASIESVLEKIRAEF 76 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence 589999999999999999999999999999999999875432 233333 3467899999999999988876
Q ss_pred -CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||. +.+.+.+.|++.+++|+.+++++++++.|.| +.++||++||..+..+.+.
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~---------- 146 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG---------- 146 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC----------
Confidence 57999999984 3446678999999999999999999998875 4579999999988766443
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+.+.+++.++.+ +|||||+|+||++.||+....
T Consensus 147 ------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~ 191 (243)
T d1q7ba_ 147 ------------QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL 191 (243)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred ------------CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh
Confidence 245888999888888888877 599999999999999876543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4e-33 Score=223.06 Aligned_cols=175 Identities=17% Similarity=0.162 Sum_probs=143.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+|++|++|||||++|||+++++.|+++|++|++++|+.++.. +..+++ .....++.++++|++|+++++++++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS-EAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999986543 223332 2224678899999999999988875
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceec-cCCCCCCCcccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAML-LNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~-~~~~~~~~~~~~ 147 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++.+.+.| +.++||++||..+.. +.+.
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~-------- 152 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN-------- 152 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCcc--------
Confidence 57999999984 3446788999999999999999999999975 347999999875432 2211
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +|||||+|+||+|.||+...
T Consensus 153 --------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~ 196 (251)
T d1vl8a_ 153 --------------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA 196 (251)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH
T ss_pred --------------ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHh
Confidence 245899999999988888887 58999999999999998653
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-33 Score=220.21 Aligned_cols=175 Identities=18% Similarity=0.088 Sum_probs=145.0
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
|..+|+||++|||||++|||+++++.|+++|++|++++|++++. +++.....++..+++|++|.++++++++
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g 75 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-----DSLVRECPGIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHSTTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-----HHHHHhcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 77789999999999999999999999999999999999987533 2222223457889999999999999987
Q ss_pred CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 ~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++.+.+.+ ..++||++||..+..+.+.
T Consensus 76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~---------- 145 (244)
T d1pr9a_ 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN---------- 145 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT----------
T ss_pred CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc----------
Confidence 46999999984 3346778999999999999999999988742 4579999999977654432
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||++.+.+++.++.+ +|||||+|+||.|.||+.+..
T Consensus 146 ------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~ 190 (244)
T d1pr9a_ 146 ------------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT 190 (244)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT
T ss_pred ------------hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh
Confidence 245899999999888888877 589999999999999976443
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.9e-33 Score=223.06 Aligned_cols=165 Identities=15% Similarity=0.221 Sum_probs=137.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
++|++|++|||||++|||+++++.|+++|++|++++|+.+.. .++..+++|++|+++++++++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999999987643 245679999999999988876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.++|++++++|+.+++++++.+.+.+ +.++||++||..+..+.+.
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------- 141 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN--------- 141 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C---------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc---------
Confidence 579999999842 345678899999999999999999988864 4579999999987765433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +|||||+|+||+|+||+.+.
T Consensus 142 -------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~ 185 (237)
T d1uzma1 142 -------------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA 185 (237)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred -------------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc
Confidence 245899999988888888887 59999999999999987543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=3.8e-33 Score=224.17 Aligned_cols=174 Identities=15% Similarity=0.114 Sum_probs=146.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....++.++++|++|+++++++++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-DCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 83 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999876543 4455555556788999999999999888764
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||. +.+.+.++|++++++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~--------- 154 (259)
T d2ae2a_ 84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY--------- 154 (259)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT---------
T ss_pred CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc---------
Confidence 47999999984 3446678899999999999999999998864 4579999999977654432
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++.+.+++.++.+ +|||||+|+||+|.||+.+
T Consensus 155 -------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~ 197 (259)
T d2ae2a_ 155 -------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 197 (259)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHH
T ss_pred -------------ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHH
Confidence 245889999999888888887 5899999999999998753
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=5.1e-33 Score=223.60 Aligned_cols=173 Identities=19% Similarity=0.172 Sum_probs=145.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....++.++++|++|.++++++++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE-KAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF 80 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999876443 3445555556789999999999999988876
Q ss_pred -CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~--------- 151 (260)
T d1zema1 81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------- 151 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT---------
T ss_pred CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc---------
Confidence 579999999842 336678899999999999999999998864 4579999999987765433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
..+|+.||.+...+++.++.+ +|||||+|+||+|.||+.
T Consensus 152 -------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~ 193 (260)
T d1zema1 152 -------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM 193 (260)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHH
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcch
Confidence 245888888888888888887 589999999999999863
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.2e-32 Score=217.58 Aligned_cols=172 Identities=18% Similarity=0.180 Sum_probs=138.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|++|++|||||++|||+++++.|+++|++|++++|++++.+ +..++ .+.+++++|++|+++++++++
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~-~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR-EAAEA-----VGAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHT-----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHH-----cCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 489999999999999999999999999999999999875332 22222 246789999999999998875
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++++++||. ...+.+.
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~---------- 144 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLG---------- 144 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTT----------
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCC----------
Confidence 579999999842 346678899999999999999999999874 33567777775 3333222
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCCc
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN 205 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~~ 205 (232)
...|+.||.+.+.+.+.++.+ +|||||+|+||+|.||+.....+
T Consensus 145 ------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~ 191 (242)
T d1ulsa_ 145 ------------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE 191 (242)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH
T ss_pred ------------CcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH
Confidence 245899999988888888877 58999999999999999766543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.5e-33 Score=223.20 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=135.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|+||++|||||++|||+++++.|+++|++|++++|++++.. +..+++.....++..+.+|++++++++++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN-ECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 83 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999999976543 3444555556689999999999999888764
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||. +.+.+.++|++.+++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~--------- 154 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--------- 154 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc---------
Confidence 37999999984 3346678899999999999999999998865 4579999999977755432
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+++.++.+ +|||||+|+||+|.||+...
T Consensus 155 -------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~ 198 (259)
T d1xq1a_ 155 -------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA 198 (259)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------
T ss_pred -------------cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh
Confidence 244888888888888888877 59999999999999998653
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=6.8e-33 Score=222.55 Aligned_cols=172 Identities=20% Similarity=0.197 Sum_probs=142.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh--cCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL--DGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
|+||++|||||++|||+++++.|+++|++|++++|++++.+. ..+++ .....++..+++|++|+++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~-~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEA-SKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999865432 22222 2234578899999999999988875
Q ss_pred --CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccc
Q 026852 79 --GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVI 147 (232)
Q Consensus 79 --~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~ 147 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-------- 152 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN-------- 152 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS--------
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC--------
Confidence 579999999842 235678899999999999999999988864 4579999999987765433
Q ss_pred ccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 148 DETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 148 ~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++...+++.++.+ +|||||+|+||+|.||+.
T Consensus 153 --------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~ 194 (258)
T d1iy8a_ 153 --------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV 194 (258)
T ss_dssp --------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHH
Confidence 255888999888888888887 589999999999999864
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4.5e-33 Score=223.63 Aligned_cols=171 Identities=22% Similarity=0.223 Sum_probs=144.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------C
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 79 (232)
+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....++.++++|++|+++++++++ +
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~-~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR-TTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999999999999999876543 3445555556789999999999999998876 5
Q ss_pred CCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC-----CccEEEEecccceeccCCCCCCCcccccc
Q 026852 80 CDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-----SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 80 ~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
+|++|||||. +.+.+.++|++.+++|+.+++++++++.|++ +.++||++||..+..+.+.
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~---------- 149 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH---------- 149 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT----------
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc----------
Confidence 7999999984 3446778999999999999999999998852 4479999999977765443
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|++||++...+++.++.+ +|||||+|+||+|.||+.
T Consensus 150 ------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~ 191 (257)
T d2rhca1 150 ------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 191 (257)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHH
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHH
Confidence 255999999999999998888 489999999999999874
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=8.5e-33 Score=221.27 Aligned_cols=170 Identities=17% Similarity=0.139 Sum_probs=142.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|+||++|||||++|||++++++|+++|++|++++|++++.. +..+++ ..++.++++|++++++++++++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999875432 223333 4678999999999999998875
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ +.++||++||..+..+.+.
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~---------- 147 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL---------- 147 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc----------
Confidence 579999999843 346678899999999999999999998864 4589999999987755433
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||.+.+.+.+.++.+ +||||++|+||+|.||+.
T Consensus 148 ------------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~ 189 (254)
T d1hdca_ 148 ------------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT 189 (254)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred ------------hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc
Confidence 245888999888888888877 589999999999999753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=4.3e-32 Score=227.98 Aligned_cols=216 Identities=19% Similarity=0.258 Sum_probs=161.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC-CcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
|+||||||+|+||++++++|++.|++|++..++.. ......+..+. ...+++++++|++|.+.+.++++ ++|+|||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 47999999999999999999999998665544432 22223333332 24689999999999999999887 5899999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhC--------CccEEEEecccceeccCCCCCCCccccccCCCCCh-
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVH--------SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP- 155 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~- 155 (232)
+|+.... .+.+++...+++|+.|+.++++++.+.. +.+++|++||+. .|+.... ....|.....+
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~----~~~~~~~~~~~~ 154 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPH----PDEVENSVTLPL 154 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCC----GGGSCTTSCCCC
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccce-eeCCCcc----CCccccccCCCC
Confidence 9986432 3345677899999999999999997751 346999999994 4544331 11111111111
Q ss_pred ---hhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeee
Q 026852 156 ---VLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIM 229 (232)
Q Consensus 156 ---~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 229 (232)
..+..+...|+.||.++|.+++.++++++++++++||+.|+||..... ..++.++.+.+.++ ++++|+|.|+|
T Consensus 155 ~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~ 233 (361)
T d1kewa_ 155 FTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDW 233 (361)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeC
Confidence 011123466999999999999999999999999999999999986553 35677888888888 67999999999
Q ss_pred ec
Q 026852 230 IY 231 (232)
Q Consensus 230 ~~ 231 (232)
+|
T Consensus 234 i~ 235 (361)
T d1kewa_ 234 LY 235 (361)
T ss_dssp EE
T ss_pred EE
Confidence 98
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-32 Score=219.62 Aligned_cols=168 Identities=15% Similarity=0.151 Sum_probs=140.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
++|+||++|||||++|||+++++.|+++|++|++++|+++.. +..++. +..++++|++|.++++++++
T Consensus 1 g~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~--~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~ 73 (248)
T d2d1ya1 1 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK--EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYA 73 (248)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH--HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999999997532 233332 34678999999999988876
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.|.| +.++||++||..+..+.+.
T Consensus 74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~--------- 144 (248)
T d2d1ya1 74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--------- 144 (248)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT---------
T ss_pred cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc---------
Confidence 57999999984 3345678899999999999999999999874 3579999999988765433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+++.++.+ +|||||+|+||.|.||+.
T Consensus 145 -------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~ 186 (248)
T d2d1ya1 145 -------------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV 186 (248)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred -------------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchH
Confidence 255888888888888888877 599999999999999863
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-33 Score=223.00 Aligned_cols=176 Identities=13% Similarity=0.092 Sum_probs=146.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.++.||+++||||++|||++++++|+++|++|++++|++++.+ +..+++.....+++++.||++|+++++++++
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~-~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE-ETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999999986544 3444455556789999999999999998875
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.+++++++|+.|+.++++++.|.| +.++||++||..+..+.+.
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~--------- 152 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF--------- 152 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH---------
T ss_pred cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC---------
Confidence 579999999853 224456789999999999999999998864 4579999999987754322
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh------cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE------NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~------~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++...+.+.++.+ .||+|++|+||+|.|++.+.
T Consensus 153 -------------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~ 199 (244)
T d1yb1a_ 153 -------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN 199 (244)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC
Confidence 245999999999999888876 37999999999999997654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-33 Score=221.36 Aligned_cols=170 Identities=19% Similarity=0.222 Sum_probs=141.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|+++.. +++.....+..++++|++|+++++++++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-----RALEQELPGAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 48999999999999999999999999999999999987432 2222223467899999999999998876
Q ss_pred -CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++++++|+.+++++++++.|.| +.++||++||..+..+.+.
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~---------- 147 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ---------- 147 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT----------
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccC----------
Confidence 579999999842 235567899999999999999999999875 2379999999987765433
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+...+++.++.+ +|||||+|+||+|.||+.+
T Consensus 148 ------------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~ 190 (250)
T d1ydea1 148 ------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWE 190 (250)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH
T ss_pred ------------cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHH
Confidence 245888999888888888887 5899999999999998753
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.5e-33 Score=223.23 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=145.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....++.++++|++|+++++++++
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~ 86 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 479999999999999999999999999999999999876543 4445555556789999999999999988765
Q ss_pred -CCCEEEEcccccc----cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI----FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... +.+.++|++.+++|+.+++++++.+.+.+ +.++||++||..+..+.+.
T Consensus 87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~----------- 155 (255)
T d1fmca_ 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------- 155 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------
T ss_pred CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc-----------
Confidence 6799999998532 35667899999999999999999988864 4468999999877755433
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+++.++.+ +|||||+|+||+|.||+...
T Consensus 156 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~ 199 (255)
T d1fmca_ 156 -----------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred -----------cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhc
Confidence 245888888888888888877 59999999999999987543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.98 E-value=2e-32 Score=219.60 Aligned_cols=170 Identities=16% Similarity=0.194 Sum_probs=141.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|+.++.. +..+++ ..++.++++|++|+++++++++
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAAR-ATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 389999999999999999999999999999999999875433 333344 4578899999999999998876
Q ss_pred -CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------- 148 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL--------- 148 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc---------
Confidence 579999999843 346678899999999999999999877642 3479999999977755433
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+++.++.+ +|||||+|+||++.||+.
T Consensus 149 -------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~ 190 (256)
T d1k2wa_ 149 -------------VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW 190 (256)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH
T ss_pred -------------ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh
Confidence 245888888888888888876 599999999999999984
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.98 E-value=1.8e-33 Score=224.23 Aligned_cols=173 Identities=18% Similarity=0.226 Sum_probs=142.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
++||||||++|||++++++|+++|++|++.+++.....++..+++.....++.++++|++|+++++++++ ++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999887654332223334444445788999999999999988875 579
Q ss_pred EEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 82 GVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 82 ~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
++|||||. +.+.+.+.|++.+++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~-------------- 147 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG-------------- 147 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC--------------
Confidence 99999984 3446778999999999999999999998875 5589999999988766443
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||.+...+.+.++.+ +|||||+|+||++.||+.+..
T Consensus 148 --------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~ 192 (244)
T d1edoa_ 148 --------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL 192 (244)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred --------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh
Confidence 245888888888888888877 599999999999999976544
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.98 E-value=7.4e-32 Score=217.77 Aligned_cols=178 Identities=18% Similarity=0.264 Sum_probs=144.6
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..|+||++|||||++|||++++++|+++|++|++++|++++.+ +..+++.. ..++.++++|++|+++++++++
T Consensus 2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ-KVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999876443 34444543 4568899999999999999875
Q ss_pred --CCCEEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||... +.+.++|+.++++|+.+++++++++.+.| +.+++|++||..+..+....
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~------ 153 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV------ 153 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS------
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc------
Confidence 5799999998432 23456789999999999999999998874 45799999998776543220
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
...|++||.+.+.+++.++.+ +|||||+|+||+|.||+.....
T Consensus 154 ---------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 199 (268)
T d2bgka1 154 ---------------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF 199 (268)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS
T ss_pred ---------------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhh
Confidence 134888888888888888877 5999999999999999876543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.98 E-value=3.2e-32 Score=216.41 Aligned_cols=171 Identities=11% Similarity=0.126 Sum_probs=143.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCe-------EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYT-------VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
++||||||++|||+++++.|+++|++ |++.+|++++.+ +..+++...+.++.++++|++|+++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~-~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE-KISLECRAEGALTDTITADISDMADVRRLTTHIV 80 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH-HHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999999997 888999876443 3444555556788999999999999988876
Q ss_pred ----CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccc
Q 026852 79 ----GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 ----~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------- 153 (240)
T d2bd0a1 81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH------- 153 (240)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------
T ss_pred HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC-------
Confidence 57999999984 3446778999999999999999999999875 4579999999988765433
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|++||.+...+.+.++.+ +|||+++|+||+|.||+...
T Consensus 154 ---------------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~ 197 (240)
T d2bd0a1 154 ---------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK 197 (240)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred ---------------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh
Confidence 245888888888888888777 58999999999999998754
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.98 E-value=3.6e-32 Score=216.32 Aligned_cols=170 Identities=18% Similarity=0.087 Sum_probs=141.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d 81 (232)
+|+||++|||||++|||+++++.|+++|++|++++|++++.. +..++ ..++..+++|++|+++++++++ ++|
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-SLAKE----CPGIEPVCVDLGDWDATEKALGGIGPVD 76 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH----STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHh----cCCCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence 489999999999999999999999999999999999875332 22222 3457889999999999999987 469
Q ss_pred EEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|||||. +.+.+.++|++.+++|+.+++++++.+.+.+ ..++||++||..+..+.+.
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------- 143 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------------- 143 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------------
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-------------
Confidence 99999984 3346778899999999999999999887742 4579999999976654332
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|.+...+++.++.+ +|||||+|+||++.||+..
T Consensus 144 ---------~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~ 186 (242)
T d1cyda_ 144 ---------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK 186 (242)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred ---------cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHH
Confidence 255999999999999888887 5899999999999998754
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.98 E-value=2.5e-32 Score=218.43 Aligned_cols=174 Identities=14% Similarity=0.191 Sum_probs=143.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|+++..+ +..+++.. ..++.++++|++|+++++++++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE-KAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 489999999999999999999999999999999999875443 33344433 5689999999999999988876
Q ss_pred -CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---Cc-cEEEEecccceeccCCCCCCCccccc
Q 026852 79 -GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SI-KRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 -~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.+.| +. ++||++||..+..+.+.
T Consensus 81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~--------- 151 (251)
T d1zk4a1 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------- 151 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT---------
T ss_pred CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC---------
Confidence 57999999984 3346678899999999999999999998874 22 48999999977655432
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+.+.++.+ +|||||+|+||+|.||+.+.
T Consensus 152 -------------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~ 197 (251)
T d1zk4a1 152 -------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197 (251)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT
T ss_pred -------------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHh
Confidence 245999999998888887764 58999999999999987543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=220.36 Aligned_cols=208 Identities=21% Similarity=0.307 Sum_probs=155.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEccc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
|+||||||+|+||++++++|+++|++|++++|...... +.+... ....++.+...|+. +.++.++|+|||+|+
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~-~~~~~~d~~~~~~~-----~~~~~~~d~VihlAa 74 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK-RNVEHW-IGHENFELINHDVV-----EPLYIEVDQIYHLAS 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGTGGG-TTCTTEEEEECCTT-----SCCCCCCSEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCH-HHHHHh-cCCCceEEEehHHH-----HHHHcCCCEEEECcc
Confidence 78999999999999999999999999999987543222 222221 12344555555554 445568999999998
Q ss_pred cccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHH
Q 026852 89 PVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSL 167 (232)
Q Consensus 89 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~ 167 (232)
.... ....++.+.+++|+.|+.++++++.+. + .++|++||+ +.|+... ..+.+|+..... .+..+..+|+.
T Consensus 75 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~-~k~I~~SS~-~vy~~~~----~~~~~e~~~~~~-~~~~p~~~Y~~ 146 (312)
T d2b69a1 75 PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-G-ARLLLASTS-EVYGDPE----VHPQSEDYWGHV-NPIGPRACYDE 146 (312)
T ss_dssp CCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-T-CEEEEEEEG-GGGBSCS----SSSBCTTCCCBC-CSSSTTHHHHH
T ss_pred cCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-C-CcEEEEECh-heecCCC----CCCCCccccCCC-CCCCCccHHHH
Confidence 6432 334667889999999999999999887 4 489999998 4455433 222333322111 01123467999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC-cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 168 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 168 sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
||.++|.+++.+++.+|++++++||+.|+||+..... ..++.++.+.+.++ +++++++.|||+|
T Consensus 147 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~ 214 (312)
T d2b69a1 147 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY 214 (312)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEE
Confidence 9999999999999999999999999999999876543 34677788888888 6799999999998
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.97 E-value=4.5e-32 Score=218.09 Aligned_cols=187 Identities=18% Similarity=0.217 Sum_probs=144.7
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
|+++++||++|||||++|||+++++.|+++|++|++++|+.++..+ ..+++ .....++.++++|++|+++++++++
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 81 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE-VTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI 81 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH-HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999876543 33332 2224678999999999999988875
Q ss_pred -----CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCc
Q 026852 79 -----GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 -----~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||. +.+.+.++|++.+++|+.+++++++++.+.+ ..++|+++||..........
T Consensus 82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~---- 157 (260)
T d1h5qa_ 82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS---- 157 (260)
T ss_dssp HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----
T ss_pred HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----
Confidence 56999999984 3346678899999999999999999988763 44577777776443221100
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
.........|+.+|++...+.+.++.+ +|||||+|+||+|.||+.....
T Consensus 158 -----------~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~ 209 (260)
T d1h5qa_ 158 -----------LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD 209 (260)
T ss_dssp -----------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC
T ss_pred -----------cccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC
Confidence 000011245999999999998888876 5899999999999999865543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.97 E-value=3.6e-32 Score=218.05 Aligned_cols=169 Identities=19% Similarity=0.230 Sum_probs=140.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d 81 (232)
|++|||||++|||++++++|+++|++|++++|++++.+ +..+++.....++.++++|++|+++++++++ ++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK-AVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 67899999999999999999999999999999986543 3444555556789999999999999998875 579
Q ss_pred EEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC----CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 82 GVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH----SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 82 ~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|||||. +.+.+.+.|++.+++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------- 147 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------- 147 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT-------------
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc-------------
Confidence 99999984 3446778899999999999999999988752 3467999999977654432
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|++||++.+.+++.++.+ +|||||+|+||+|.||+.
T Consensus 148 ---------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~ 189 (255)
T d1gega_ 148 ---------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW 189 (255)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred ---------cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHH
Confidence 245888888888888888877 599999999999999864
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.97 E-value=1.4e-31 Score=214.82 Aligned_cols=176 Identities=17% Similarity=0.157 Sum_probs=142.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++.....+++++++|+++.++++++++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 81 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999999999999999999986443 4455555556788999999999999888764
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVID 148 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~ 148 (232)
.+|++|||||.. .+.+.++|++.+++|+.+++++.+++.+.+ +.++||++||..+..+.+.
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~--------- 152 (258)
T d1ae1a_ 82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS--------- 152 (258)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT---------
T ss_pred CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc---------
Confidence 369999999843 345677899999999999999999988764 5679999999987655432
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.+|.+.+.+++.++.+ +||||++|+||++.||+....
T Consensus 153 -------------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~ 197 (258)
T d1ae1a_ 153 -------------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA 197 (258)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred -------------chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh
Confidence 245899999999998888887 489999999999999986543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.97 E-value=1.3e-31 Score=214.44 Aligned_cols=171 Identities=18% Similarity=0.153 Sum_probs=140.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
..|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++ ..+..++++|++|.++++++++
T Consensus 2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~-~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ-QLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999875432 233333 3567899999999999988876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
++|++|||||.. .+.+.++|++.+++|+.+++++++++.+.| ..++||++||..+..+.+.
T Consensus 78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~---------- 147 (253)
T d1hxha_ 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ---------- 147 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT----------
T ss_pred hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc----------
Confidence 579999999853 335677899999999999999999999975 3479999999987755433
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++...+++.++.+ ++||||+|+||+|.||+.
T Consensus 148 ------------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~ 191 (253)
T d1hxha_ 148 ------------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM 191 (253)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred ------------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhH
Confidence 245888888888888777765 469999999999999864
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.97 E-value=5.7e-31 Score=210.79 Aligned_cols=170 Identities=14% Similarity=0.100 Sum_probs=136.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-CcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~----- 78 (232)
+|++|++|||||++|||++++++|+++|++|++++|+.++.+............++.++.+|++ +.++++++++
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999998876432111112233568899999998 5566776654
Q ss_pred --CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC------ccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS------IKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .++.|++++++|+.|++++++++.+.+. .++||++||..+..+.+.
T Consensus 82 ~g~iDilvnnAG~~---~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~----------- 147 (254)
T d1sbya1 82 LKTVDILINGAGIL---DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ----------- 147 (254)
T ss_dssp HSCCCEEEECCCCC---CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----------
T ss_pred cCCCCEEEeCCCCC---CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC-----------
Confidence 679999999954 5688999999999999999999988752 368999999988765433
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|++||++...+.+.++.+ +||||++|+||+|.||+
T Consensus 148 -----------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~ 188 (254)
T d1sbya1 148 -----------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred -----------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence 244888888888877777776 59999999999999985
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=2.6e-31 Score=214.13 Aligned_cols=175 Identities=19% Similarity=0.216 Sum_probs=136.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
.|++|++|||||++|||++++++|+++|++|++++|++++.+ +..+++. ....++.++++|+++.++++++++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE-ETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 80 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999986543 2233322 234579999999999999998876
Q ss_pred ----CCCEEEEcccccc---------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccce-eccCCCCCC
Q 026852 79 ----GCDGVFHTASPVI---------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGA-MLLNETPMT 142 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~-~~~~~~~~~ 142 (232)
++|++|||||... +.+.+.|+..+++|+.+++++++++.|.+ ..+++|+++|+.+ ..+.+.
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~--- 157 (264)
T d1spxa_ 81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD--- 157 (264)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT---
T ss_pred HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC---
Confidence 5799999998421 12446789999999999999999999875 2357777766643 433322
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||++.+.+++.++.+ +|||||+|+||+|.||+...
T Consensus 158 -------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~ 201 (264)
T d1spxa_ 158 -------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 201 (264)
T ss_dssp -------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred -------------------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhc
Confidence 244888888888888888887 59999999999999998643
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.97 E-value=2.3e-31 Score=215.21 Aligned_cols=174 Identities=18% Similarity=0.183 Sum_probs=137.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhc---
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++. ....++.++++|++|+++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~-~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE-ETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999986543 2233332 224578999999999999988876
Q ss_pred ----CCCEEEEccccccc---------CCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecc-cceeccCCCCCC
Q 026852 79 ----GCDGVFHTASPVIF---------LSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSS-IGAMLLNETPMT 142 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS-~~~~~~~~~~~~ 142 (232)
++|++|||||.... .+.+.|++.+++|+.+++++++++.+.+ +.+++|+++| .++..+.+.
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~--- 157 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD--- 157 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS---
T ss_pred HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCC---
Confidence 57999999985321 2233588999999999999999998875 3356666655 444444332
Q ss_pred CccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 143 PDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 143 ~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++...+++.++.+ +|||||+|+||+|.||+..
T Consensus 158 -------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~ 200 (272)
T d1xkqa_ 158 -------------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTN 200 (272)
T ss_dssp -------------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHH
T ss_pred -------------------cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhh
Confidence 245888888888888888877 5999999999999998754
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=5.5e-30 Score=211.61 Aligned_cols=209 Identities=21% Similarity=0.278 Sum_probs=163.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEE------EEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA------TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~------~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
|+||||||+|+||++++++|+++|++|.. .++.........+... ....++.++++|.++..........+|.
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~ 79 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELRGVDA 79 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccccccce
Confidence 47999999999999999999999986544 3322211111222222 2346799999999999999999999999
Q ss_pred EEEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 83 VFHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 83 vi~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
|+|+|+... ........+.+++|+.|+.++++++.+. +.+++|++||.. .++... ..+.+|+....|
T Consensus 80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~-~yg~~~----~~~~~E~~~~~p------ 147 (322)
T d1r6da_ 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQ-VYGSID----SGSWTESSPLEP------ 147 (322)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGG-GGCCCS----SSCBCTTSCCCC------
T ss_pred EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecce-eecCCC----CCCCCCCCCCCC------
Confidence 999997532 2334556788899999999999999987 788999999994 444433 344566654443
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
...|+.||.++|.+++.++++++++++++||+.|+||..... ..++.++.+.+.++ ++++|.+.|||+|
T Consensus 148 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~ 219 (322)
T d1r6da_ 148 NSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVH 219 (322)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEE
Confidence 256999999999999999999999999999999999986554 35677778888887 7899999999998
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.97 E-value=3.4e-31 Score=214.42 Aligned_cols=172 Identities=16% Similarity=0.179 Sum_probs=138.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhc----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
|+||++|||||++|||+++++.|+++|++|++++|++++.+ +..+++. ....++.++++|++|+++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE-ETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999876543 2223332 234578999999999999988875
Q ss_pred ---CCCEEEEcccccc-------cCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcc
Q 026852 79 ---GCDGVFHTASPVI-------FLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... +.+.+.|++.+++|+.+++++++++.+.+ +.++|+++||..+..+.+.
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~------ 154 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG------ 154 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT------
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC------
Confidence 5799999998421 13446789999999999999999998874 4467888888766544332
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+...+++.++.+ +|||||+|+||+|.||+.
T Consensus 155 ----------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~ 196 (274)
T d1xhla_ 155 ----------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM 196 (274)
T ss_dssp ----------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred ----------------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchh
Confidence 244888888888888888877 599999999999999864
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.9e-30 Score=213.31 Aligned_cols=209 Identities=19% Similarity=0.167 Sum_probs=153.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
|+||||||+|+||++++++|+++|++|++++|....... ...+... ..++.++++|++|.+.+.++++ ++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 469999999999999999999999999999875433221 1112222 3579999999999999999988 789999
Q ss_pred Ecccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCC-CCChhhccccc
Q 026852 85 HTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW-FSNPVLCKENK 162 (232)
Q Consensus 85 ~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~~ 162 (232)
|+|+... ..+.+++.+.+++|+.|+.++++++.+. +.+++|++||... ++... .....|+. ... ..
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~v-y~~~~----~~~~~e~~~~~~------p~ 146 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATV-YGDQP----KIPYVESFPTGT------PQ 146 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGG-GCSCC----SSSBCTTSCCCC------CS
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceE-Ecccc----ccccccccccCC------Cc
Confidence 9998542 2334567899999999999999999998 7899999999854 43332 11112221 111 23
Q ss_pred hhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCCCCCC--------cchHHHHHH-HHcCC----------CCCC
Q 026852 163 EWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPIL--------NFGAEVILN-LINGN----------IYSA 222 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~~~~~--------~~~~~~~~~-~~~~~----------~~~~ 222 (232)
..|+.+|..++.++..+..+ .+++++++||++++||...... ....+.+.. ...+. ...+
T Consensus 147 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~ 226 (338)
T d1udca_ 147 SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED 226 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTT
T ss_pred chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCC
Confidence 56999999999999876665 4899999999999998754221 223334444 33322 3346
Q ss_pred ccceeeeec
Q 026852 223 AIQDRIMIY 231 (232)
Q Consensus 223 ~~~~~~~~~ 231 (232)
+++.|||+|
T Consensus 227 g~~~rd~i~ 235 (338)
T d1udca_ 227 GTGVRDYIH 235 (338)
T ss_dssp SSCEECEEE
T ss_pred CCceeeEEE
Confidence 899999997
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=7e-30 Score=210.43 Aligned_cols=211 Identities=19% Similarity=0.149 Sum_probs=164.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~ 86 (232)
|+||||||+|+||++++++|+++||+|++++|..+......++.+.. ..+++++++|++|.+.+.+.+.. .++++|+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 79 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI-EGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc-cCCcEEEEccccChHHhhhhhccccccccccc
Confidence 68999999999999999999999999999999876544344554443 46799999999999999988764 5788888
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
|+.... ...+.+.+.++.|+.|+.++++++.+....+++++.||. .+++... ....+|+....| ...|
T Consensus 80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~-~~~~~~~----~~~~~E~~~~~p------~~~Y 148 (321)
T d1rpna_ 80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS-EMFGLIQ----AERQDENTPFYP------RSPY 148 (321)
T ss_dssp CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG-GGGCSCS----SSSBCTTSCCCC------CSHH
T ss_pred cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccch-hhcCccc----CCCCCCCCCccc------cChh
Confidence 875322 345667889999999999999999998445677777777 5555433 334455544333 3669
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
+.+|.++|.++..+..+++++++++||++++||...... ..+...+.+...++ .++++++.|+|+|
T Consensus 149 ~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~ 220 (321)
T d1rpna_ 149 GVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF 220 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred HHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEE
Confidence 999999999999999999999999999999999865442 23445566655554 5789999999997
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=3.6e-31 Score=212.38 Aligned_cols=179 Identities=17% Similarity=0.153 Sum_probs=139.2
Q ss_pred CCCCCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc
Q 026852 1 MMSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
||+.+|+||++|||||+| |||++++++|+++|++|++.+|+++.. +..++......+..++++|++|+++++++++
T Consensus 1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (256)
T d1ulua_ 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR--PEAEKLAEALGGALLFRADVTQDEELDALFA 78 (256)
T ss_dssp CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHH--HHHHHhhhccCcccccccccCCHHHHHHHHH
Confidence 788899999999999987 999999999999999999999886432 2223333334567889999999999998875
Q ss_pred -------CCCEEEEccccc---------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCC
Q 026852 79 -------GCDGVFHTASPV---------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPM 141 (232)
Q Consensus 79 -------~~d~vi~~Ag~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~ 141 (232)
++|++|||||.. .+.+.++|+..+++|+.+++.+++.+.+.+ ..++||++||..+..+.+.
T Consensus 79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~-- 156 (256)
T d1ulua_ 79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-- 156 (256)
T ss_dssp HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT--
T ss_pred HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC--
Confidence 579999999842 224456678899999999999999998875 3479999999977655433
Q ss_pred CCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 142 TPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 142 ~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||++.+.+++.++.+ +|||||+|+||.+.|++....
T Consensus 157 --------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~ 201 (256)
T d1ulua_ 157 --------------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI 201 (256)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch
Confidence 255899999999998888887 589999999999999886543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8.4e-31 Score=214.20 Aligned_cols=173 Identities=17% Similarity=0.154 Sum_probs=140.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-----CCCCceEEEEcCCCCcchHHHhhc
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-----GATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
..|+||++|||||++|||+++++.|+++|++|++++|+.++... ..+++. ....++.++++|++|+++++++++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~-~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKS-AADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 46899999999999999999999999999999999999865432 222222 224678999999999999998875
Q ss_pred -------CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCC
Q 026852 79 -------GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 -------~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
++|++|||||. +.+.+.++|+..+++|+.+++++++++.+.| +.++||++||. ...+.+.
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~---- 161 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPL---- 161 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTT----
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccccc----
Confidence 57999999984 3346678899999999999999999998875 34678888765 3322211
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|++.+.+++.++.+ +|||||+|+||+|.||+.
T Consensus 162 ------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~ 203 (297)
T d1yxma1 162 ------------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA 203 (297)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGG
T ss_pred ------------------cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcch
Confidence 245888999999998888887 489999999999999874
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=3.6e-30 Score=215.90 Aligned_cols=214 Identities=21% Similarity=0.218 Sum_probs=158.5
Q ss_pred CCCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
||+ ++|+||||||+||||++++++|+++|++|++++|....... .. .....+..+|+++.+.+.++++++
T Consensus 11 ~~~---~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~---~~----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (363)
T d2c5aa1 11 WPS---ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---ED----MFCDEFHLVDLRVMENCLKVTEGV 80 (363)
T ss_dssp CTT---SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---GG----GTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CCC---CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh---hh----cccCcEEEeechhHHHHHHHhhcC
Confidence 555 45779999999999999999999999999999886543211 11 134578889999999999999999
Q ss_pred CEEEEccccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCcc--ccccCCCCChh
Q 026852 81 DGVFHTASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDV--VIDETWFSNPV 156 (232)
Q Consensus 81 d~vi~~Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~--~~~e~~~~~~~ 156 (232)
|+|||+|+.... .....+...+..|+.++.++++++... +.+++|++||...+.........+. ...+.+
T Consensus 81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~----- 154 (363)
T d2c5aa1 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAW----- 154 (363)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-----
T ss_pred CeEeecccccccccccccccccccccccchhhHHHHhHHhh-CccccccccccccccccccccccccccccccCC-----
Confidence 999999975432 235667888999999999999999987 7899999999855432221111111 111121
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc---chHHHH-HHHHcCC---CCCCccceeee
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVI-LNLINGN---IYSAAIQDRIM 229 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~---~~~~~~-~~~~~~~---~~~~~~~~~~~ 229 (232)
+..+..+|+.||.++|.+++.+.+++|++++++||+.++||....... ...... ....... .+++|.+.|||
T Consensus 155 -~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~ 233 (363)
T d2c5aa1 155 -PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSF 233 (363)
T ss_dssp -SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECC
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEE
Confidence 122346799999999999999999999999999999999997644321 112222 2233333 88899999999
Q ss_pred ec
Q 026852 230 IY 231 (232)
Q Consensus 230 ~~ 231 (232)
+|
T Consensus 234 i~ 235 (363)
T d2c5aa1 234 TF 235 (363)
T ss_dssp EE
T ss_pred ee
Confidence 98
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=5.4e-30 Score=213.19 Aligned_cols=213 Identities=20% Similarity=0.213 Sum_probs=169.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhc--CCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELD--GATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
+.|+||||||||+||++++++|+++|++|++++|....... +...... ....+++++++|..|...+......++.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 44799999999999999999999999999999975432211 1111111 1135789999999999999999999999
Q ss_pred EEEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcccc
Q 026852 83 VFHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKEN 161 (232)
Q Consensus 83 vi~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 161 (232)
++|.++... ..+.+++...+++|+.|+.++++++... +.+++|++||... |+... +.+.+|+.+..|.
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~v-yg~~~----~~~~~E~~~~~p~----- 163 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSST-YGDHP----GLPKVEDTIGKPL----- 163 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG-GTTCC----CSSBCTTCCCCCC-----
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEccccee-eCCCC----CCCccCCCCCCCC-----
Confidence 999997532 2345667889999999999999999987 7889999999954 55433 4456676665543
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC---cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 162 KEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 162 ~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
..|+.+|.++|++++.+++..+++++++||++|+||...+.. ..++.++.+.+.|+ ++++|.+.|+|+|
T Consensus 164 -~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~ 238 (341)
T d1sb8a_ 164 -SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCY 238 (341)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred -CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEE
Confidence 569999999999999999999999999999999999876543 24566777788887 7789999999998
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.8e-31 Score=210.45 Aligned_cols=170 Identities=15% Similarity=0.153 Sum_probs=138.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC--CCCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+||++|||||++|||+++++.|+++|++|++++|+.++.. +..+++.. ...++.++++|++|+++++++++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV-QCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999986543 23333322 24678999999999999998875
Q ss_pred --CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC------ccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS------IKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. ..++|++.+++|+.+++++++++.+.+. .++||++||..+..+.+.
T Consensus 80 ~G~iDilVnnAg~~---~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~----------- 145 (254)
T d2gdza1 80 FGRLDILVNNAGVN---NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ----------- 145 (254)
T ss_dssp HSCCCEEEECCCCC---CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----------
T ss_pred cCCcCeeccccccc---ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC-----------
Confidence 579999999864 3567899999999999999999988742 267999999988765433
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHH--HHHh---cCCcEEEEccCceeCCCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWK--FAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~--~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|++||++...+++. ++.+ +|||||+|+||+|.||+.+
T Consensus 146 -----------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~ 190 (254)
T d2gdza1 146 -----------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE 190 (254)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH
T ss_pred -----------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhh
Confidence 24588888888888764 4443 6999999999999998753
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6e-30 Score=212.98 Aligned_cols=212 Identities=17% Similarity=0.125 Sum_probs=157.6
Q ss_pred cEE-EEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-----cCCCCceEEEEcCCCCcchHHHhhc--CC
Q 026852 9 KVV-CVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-----DGATERLHLFKANLLEEGSFDSAVD--GC 80 (232)
Q Consensus 9 ~~i-lItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~--~~ 80 (232)
|+| |||||+||||++++++|+++|++|++++|..+......++.+ .....+++++++|++|.+.+..+++ ++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 456 999999999999999999999999999997653322222221 1123578999999999999999986 56
Q ss_pred CEEEEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCccccccCCCCChhh
Q 026852 81 DGVFHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL 157 (232)
Q Consensus 81 d~vi~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~ 157 (232)
++++|+|+... .....+....+++|+.|+.++++++.+.. +.+++|++||+ ++|+.+. +.+++|+....|
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~-~vyg~~~----~~~~~E~~~~~P-- 153 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS-ELYGKVQ----EIPQKETTPFYP-- 153 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGTCSCS----SSSBCTTSCCCC--
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch-heecCCC----CCCCCCCCCCCC--
Confidence 79999987532 22345556778999999999999998862 33589999998 5565433 445666665443
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc--chHHHHHH-HHcCC---CCCCccceeeeec
Q 026852 158 CKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILN-LINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 158 ~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~--~~~~~~~~-~~~~~---~~~~~~~~~~~~~ 231 (232)
..+|+.||.++|.+++.+.+.++++++++||+.++||....... .....+.. .+... .++++.+.|+|+|
T Consensus 154 ----~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~ 229 (347)
T d1t2aa_ 154 ----RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH 229 (347)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeE
Confidence 35699999999999999999999999999999999997554321 22223333 33333 6889999999987
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1e-30 Score=209.71 Aligned_cols=175 Identities=21% Similarity=0.218 Sum_probs=141.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC--CCceEEEEcCCCCcchHHHhhc-----
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+++|++|||||++|||+++++.|+++|++|++++|++++.+ +..+++... ..++.+++||++++++++++++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~-~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE-ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999976443 333334322 3578999999999999988875
Q ss_pred --CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC-----CccEEEEecccceeccCCCCCCCccc
Q 026852 79 --GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH-----SIKRVVLTSSIGAMLLNETPMTPDVV 146 (232)
Q Consensus 79 --~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~vSS~~~~~~~~~~~~~~~~ 146 (232)
++|++|||||. +.+.+.+.|++.+++|+.+++++.+++.+.+ ..++||++||..+....+.
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~------- 159 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------- 159 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-------
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC-------
Confidence 57999999984 3346678899999999999999999987752 2479999999876533221
Q ss_pred cccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCC
Q 026852 147 IDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 147 ~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~ 201 (232)
.....|+.+|++...+++.++.+ +||++++|+||.+.|++..
T Consensus 160 -------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~ 206 (257)
T d1xg5a_ 160 -------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF 206 (257)
T ss_dssp -------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred -------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh
Confidence 11245999999999998888764 5899999999999998754
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.97 E-value=1.1e-30 Score=207.64 Aligned_cols=174 Identities=18% Similarity=0.154 Sum_probs=136.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|+.++.. +..++ ...++.++++|++++++++++++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~ 77 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA-EAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEF 77 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999999975432 22222 24678899999999999988765
Q ss_pred -CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 79 -GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 79 -~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
++|++|||||. +.+.+.+.|++.+++|+.+++++++++.+.+..++.|+++|..+..+.
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~--------------- 142 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA--------------- 142 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH---------------
T ss_pred CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc---------------
Confidence 57999999984 334667788999999999999999999998755444444444232211
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
|. ...|+.+|++.+.+++.++++ +||||++|+||.+.||+.....
T Consensus 143 --~~-----~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~ 190 (241)
T d2a4ka1 143 --FG-----LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP 190 (241)
T ss_dssp --HH-----HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC
T ss_pred --cC-----ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh
Confidence 11 244888888888888888887 4899999999999999876544
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.97 E-value=6.7e-30 Score=203.99 Aligned_cols=175 Identities=19% Similarity=0.251 Sum_probs=138.6
Q ss_pred cEEEEECCCChhHHHHHHHHHH---CCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 78 (232)
|+||||||++|||++++++|++ +|++|++++|++++.+. ++++.....++.++++|++|+++++++++
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE--LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH--HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH--HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 7899999999999999999974 69999999999987642 33333335689999999999999887754
Q ss_pred --CCCEEEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--------------CccEEEEecccceecc
Q 026852 79 --GCDGVFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--------------SIKRVVLTSSIGAMLL 136 (232)
Q Consensus 79 --~~d~vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~iv~vSS~~~~~~ 136 (232)
++|++|||||.. .+.+.+.+++++++|+.|++++++++.+.+ +.+++|++||..+...
T Consensus 81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~ 160 (248)
T d1snya_ 81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ 160 (248)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence 479999999842 224455688999999999999999988763 2478999999866543
Q ss_pred CCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 137 NETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
... . .....|+.||++...+.+.++.+ +||++++|+||+|.|++.....
T Consensus 161 ~~~--------------~-----~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~ 212 (248)
T d1snya_ 161 GNT--------------D-----GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA 212 (248)
T ss_dssp TCC--------------S-----CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC
T ss_pred CCC--------------C-----CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC
Confidence 211 0 01235999999999998888776 4899999999999999976543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=1.1e-29 Score=211.77 Aligned_cols=212 Identities=19% Similarity=0.213 Sum_probs=159.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC--CcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN--SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+|+||||||+|+||++++++|++.|++|.++.++.- .........+ ...++.++.+|++|.+.+..+++++|.|+|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~ 79 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIVH 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence 578999999999999999999999998766655421 1111222222 246899999999999999999999999999
Q ss_pred ccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCC--------CCccccccCCCCChh
Q 026852 86 TASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPM--------TPDVVIDETWFSNPV 156 (232)
Q Consensus 86 ~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~--------~~~~~~~e~~~~~~~ 156 (232)
+|+.... ....++.+.+++|+.|+.++++++... + .++|++||... |+..... ......+|...
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~v-yg~~~~~~~~~~~~~~~~~~~~e~~~---- 152 (346)
T d1oc2a_ 80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEV-YGDLPLREDLPGHGEGPGEKFTAETN---- 152 (346)
T ss_dssp CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGG-GCCBCCGGGSTTTTCSTTSSBCTTSC----
T ss_pred hhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceE-ecccCccccccccccCcccccccCCC----
Confidence 9985432 223456788999999999999999887 4 57888888844 4322100 00111222221
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
..+...|+.+|.++|.+++.+.++++++++++||+.|+||..... ......+.+...+. +++++.+.|+|+|
T Consensus 153 --~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~ 227 (346)
T d1oc2a_ 153 --YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIH 227 (346)
T ss_dssp --CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccc
Confidence 122366999999999999999998999999999999999976554 35566677777776 7899999999998
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.1e-30 Score=209.10 Aligned_cols=173 Identities=23% Similarity=0.248 Sum_probs=137.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEE---cCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATV---RDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~---r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
.|+||||||++|||+++++.|+++|++|+.+. |+.+.... +..+++.....++..+++|++|.+++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 37889999999999999999999999866554 44332211 2334445556789999999999999999876
Q ss_pred -CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 -GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 -~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.+|+++||||. ..+.+.+.|++.+++|+.|+.+++++++|.| +.++||++||..+..+.+.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~---------- 151 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF---------- 151 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT----------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC----------
Confidence 35999999984 2346678899999999999999999998875 4589999999988766543
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|++||++.+.+++.++.+ +||+|++|+||+|.|++.+.
T Consensus 152 ------------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~ 195 (285)
T d1jtva_ 152 ------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK 195 (285)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH
Confidence 255999999999999998887 59999999999999998754
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=9.1e-30 Score=215.63 Aligned_cols=223 Identities=16% Similarity=0.141 Sum_probs=156.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc-------------CC--CCcchhhhhhhc-CCCCceEEEEcCCCCcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-------------DP--NSPKTEHLRELD-GATERLHLFKANLLEEG 71 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r-------------~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~ 71 (232)
||+||||||+|+||++++++|++.|++|+++|- +. .....+.+.... ....+++++++|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 589999999999999999999999999999861 11 000111111111 11357899999999999
Q ss_pred hHHHhhc--CCCEEEEccccccc----CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCC-CCCCc
Q 026852 72 SFDSAVD--GCDGVFHTASPVIF----LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNET-PMTPD 144 (232)
Q Consensus 72 ~~~~~~~--~~d~vi~~Ag~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~-~~~~~ 144 (232)
.++++++ ++|+|||+|+.... ...+.+...+++|+.|+.++++++.+.....++++.||.. .++... ...+.
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~-~~~~~~~~~~~~ 159 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTPNIDIEEG 159 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCCSSCBCSS
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccc-cccccccccccc
Confidence 9999998 46999999985321 2334456788999999999999999984445677777774 443221 11111
Q ss_pred c-ccccCCCC-ChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC----------------cc
Q 026852 145 V-VIDETWFS-NPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL----------------NF 206 (232)
Q Consensus 145 ~-~~~e~~~~-~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~----------------~~ 206 (232)
. ...+.... .-.++..+..+|+.||.++|.++..+.++++++++++||++++||...... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
T d1i24a_ 160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239 (393)
T ss_dssp EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence 0 11111100 001122334679999999999999999999999999999999999754321 13
Q ss_pred hHHHHHHHHcCC---CCCCccceeeeec
Q 026852 207 GAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 207 ~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+..++.+...++ +++++.|.|||+|
T Consensus 240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~ 267 (393)
T d1i24a_ 240 LNRFCVQAAVGHPLTVYGKGGQTRGYLD 267 (393)
T ss_dssp HHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred hhhhhHHhhcCCeeEEeeeccccccccc
Confidence 456777777777 7899999999997
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.97 E-value=2.4e-30 Score=209.33 Aligned_cols=175 Identities=20% Similarity=0.134 Sum_probs=144.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
.+|+||++|||||++|||+++++.|+++|++|++++|+.++...+..+++.....++.++++|++|++++.++++
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 93 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence 459999999999999999999999999999999999987544334455555556789999999999999998876
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++++.+.| ..+++++++|..+......
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~----------- 162 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP----------- 162 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-----------
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccccc-----------
Confidence 569999999842 346678889999999999999999999986 3468888887754322111
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
....|+.+|++.+.+++.++.+ +|||||+|+||+|.||+
T Consensus 163 ----------~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~ 204 (272)
T d1g0oa_ 163 ----------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 204 (272)
T ss_dssp ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH
Confidence 1245999999999999888887 59999999999999975
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.97 E-value=1.2e-30 Score=209.54 Aligned_cols=175 Identities=22% Similarity=0.209 Sum_probs=141.5
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc----
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 78 (232)
|..|.||++|||||++|||++++++|+++|++|++++|+.++...+..+++...+.+++++++|++|+++++++++
T Consensus 1 ~~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 1 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999988776543334445555556789999999999999998876
Q ss_pred ---CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceec-cCCCCCCCccccc
Q 026852 79 ---GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAML-LNETPMTPDVVID 148 (232)
Q Consensus 79 ---~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~-~~~~~~~~~~~~~ 148 (232)
++|++|||||.. .+.+.+.|++.+++|+.+++++++.+.+.+ ..+++++++|..+.. +.+.
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~--------- 151 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--------- 151 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS---------
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC---------
Confidence 569999999843 335677889999999999999999999986 335777776664433 2211
Q ss_pred cCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCC
Q 026852 149 ETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 149 e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~ 199 (232)
...|+++|++.+.+++.++.+ +|||+++|+||++.||+
T Consensus 152 -------------~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~ 192 (259)
T d1ja9a_ 152 -------------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 192 (259)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChh
Confidence 245899999998888888887 58999999999999975
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.97 E-value=5.4e-30 Score=207.50 Aligned_cols=171 Identities=15% Similarity=0.128 Sum_probs=137.3
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
.|+||++|||||++|||+++++.|+++|++|++++|++++.. +..+++ ..++..+++|+++.++++++++
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~-~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLA-ELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999999875432 222222 4578999999999999988865
Q ss_pred -CCCEEEEcccccc------cCCC----CchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcc
Q 026852 79 -GCDGVFHTASPVI------FLSD----NPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||... .... +.|++.+++|+.+++++++++.|.| ..+++|++||..+..+.+.
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~------ 151 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGG------ 151 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSS------
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCC------
Confidence 6799999998431 1122 2488999999999999999998875 3479999999877655433
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.||++...+++.++.+. +||||+|+||+|.||+..
T Consensus 152 ----------------~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~ 193 (276)
T d1bdba_ 152 ----------------GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRG 193 (276)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCC
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCC
Confidence 2448888888888888887773 699999999999999754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.6e-29 Score=210.84 Aligned_cols=212 Identities=18% Similarity=0.211 Sum_probs=150.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
|+||||||+||||++++++|+++|++|+++++...... +..... .....+++++++|++|.+++..+++ ++|+|||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih 80 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTY-DSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT-HHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcch-hHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 68999999999999999999999999999986443222 111111 1123578999999999999999887 7899999
Q ss_pred cccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchh
Q 026852 86 TASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEW 164 (232)
Q Consensus 86 ~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 164 (232)
+|+... ....+.+.....+|+.++.++++++.+. +.+++|++||+. .++.....+.....+|+....| ..+
T Consensus 81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~-vyg~~~~~~~~~~~~e~~~~~p------~~~ 152 (347)
T d1z45a2 81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSAT-VYGDATRFPNMIPIPEECPLGP------TNP 152 (347)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGG-GGCCGGGSTTCCSBCTTSCCCC------CSH
T ss_pred ccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeeccee-eecCcccCCCCCccccccCCCC------CCh
Confidence 998643 2234456788899999999999999988 788999999995 5554443333444555544333 256
Q ss_pred HHHHHHHHHHHHHHHHHh--cCCcEEEEccCceeCCCCCCC--------CcchHHHHHHHHcCC-----CCCCccceeee
Q 026852 165 YSLAKTLAEEAAWKFAKE--NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGN-----IYSAAIQDRIM 229 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~--~~i~~~~v~pg~v~g~~~~~~--------~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 229 (232)
|+.||.++|.+++.+.+. .+++++++||+.++|+..... .......+.....++ +++++.+.|||
T Consensus 153 Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~ 232 (347)
T d1z45a2 153 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG 232 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred hHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCC
Confidence 999999999999888764 589999999999998764332 123344454544332 55665554444
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=3e-30 Score=207.33 Aligned_cols=175 Identities=17% Similarity=0.095 Sum_probs=142.6
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHH---CCCeEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhh
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAV 77 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~ 77 (232)
++.|++|+++||||++|||++++++|++ +|++|++++|++++.+ +..+++. ....++.+++||+++++++++++
T Consensus 1 ~~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~-~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~ 79 (259)
T d1oaaa_ 1 ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR-QLKEELGAQQPDLKVVLAAADLGTEAGVQRLL 79 (259)
T ss_dssp CCCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH-HHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHH-HHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence 3568999999999999999999999986 6999999999886543 2333332 23457899999999999998886
Q ss_pred c-----------CCCEEEEcccccc--------cCCCCchhhhhHHHHHHHHHHHHHHHhhCC-----ccEEEEecccce
Q 026852 78 D-----------GCDGVFHTASPVI--------FLSDNPQADIVDPAVMGTLNVLRSCAKVHS-----IKRVVLTSSIGA 133 (232)
Q Consensus 78 ~-----------~~d~vi~~Ag~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~vSS~~~ 133 (232)
+ ..|++|||||... +.+.+.|++++++|+.+++++++++.+.+. .++||++||..+
T Consensus 80 ~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~ 159 (259)
T d1oaaa_ 80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA 159 (259)
T ss_dssp HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred HHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 4 2479999998432 234467889999999999999999999863 358999999987
Q ss_pred eccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCC
Q 026852 134 MLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~ 200 (232)
..+.+. ...|+.||++.+.+++.++.+ +||||++|+||+|.|++.
T Consensus 160 ~~~~~~----------------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~ 205 (259)
T d1oaaa_ 160 LQPYKG----------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ 205 (259)
T ss_dssp TSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH
T ss_pred cCCCcc----------------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHH
Confidence 765433 255999999999999999887 599999999999999874
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.5e-31 Score=212.61 Aligned_cols=193 Identities=18% Similarity=0.097 Sum_probs=141.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (232)
+++|||||++|||++++++|+++ |++|++.+|++++.+ +..+++.....++.+++||++|.++++++++ ++
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ-AAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 56799999999999999999986 899999999987644 4555565556788999999999999988765 56
Q ss_pred CEEEEccccccc-----CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCC-----------
Q 026852 81 DGVFHTASPVIF-----LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTP----------- 143 (232)
Q Consensus 81 d~vi~~Ag~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~----------- 143 (232)
|++|||||.... .+.+.++..+++|+.|++++++.+.|.+ ..+|||++||..+..+.....+.
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~ 162 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence 999999996432 2234677899999999999999999986 34799999998765432210000
Q ss_pred cc-----------ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh-------cCCcEEEEccCceeCCCCCCCCc
Q 026852 144 DV-----------VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-------NGIDLVAIHPGTVIGPFFQPILN 205 (232)
Q Consensus 144 ~~-----------~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-------~~i~~~~v~pg~v~g~~~~~~~~ 205 (232)
.. .........+. .....|+.||.+...+.+.++.+ .||++++++||+|.|++......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~ 239 (275)
T d1wmaa1 163 EEELVGLMNKFVEDTKKGVHQKEG---WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTT---CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCS
T ss_pred hhhhccccccchhcccccccccCC---CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCccc
Confidence 00 00000000000 11234999999888877666554 38999999999999999776543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.96 E-value=8.6e-30 Score=201.63 Aligned_cols=164 Identities=17% Similarity=0.125 Sum_probs=133.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi 84 (232)
|++|++|||||++|||+++++.|+++|++|++++|+++ .+++. ...++.+|+++ .+.+.+.+.++|++|
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~-----~l~~~-----~~~~~~~Dv~~~~~~~~~~~g~iD~lV 71 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-----LLKRS-----GHRYVVCDLRKDLDLLFEKVKEVDILV 71 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHT-----CSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH-----HHHhc-----CCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence 68999999999999999999999999999999999863 23322 23578899975 345555566899999
Q ss_pred Ecccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCChh
Q 026852 85 HTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV 156 (232)
Q Consensus 85 ~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~ 156 (232)
||||. +.+.+.++|++.+++|+.++.++++++.+.+ +.+++|++||.....+.+.
T Consensus 72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~----------------- 134 (234)
T d1o5ia_ 72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN----------------- 134 (234)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----------------
T ss_pred ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc-----------------
Confidence 99983 3346778899999999999999999998864 4479999999866544322
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|+.+|++...+++.++.+ +|||||+|+||++.||+..
T Consensus 135 -----~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~ 177 (234)
T d1o5ia_ 135 -----LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK 177 (234)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH
T ss_pred -----cccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhh
Confidence 245888888888888888777 5899999999999999854
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=5.5e-30 Score=209.73 Aligned_cols=175 Identities=21% Similarity=0.097 Sum_probs=138.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc----hhhhhhhc-CCCCceEEEEcCCCCcchHHHhhc-
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK----TEHLRELD-GATERLHLFKANLLEEGSFDSAVD- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~- 78 (232)
.|+||++|||||++|||+++++.|+++|++|++.+|+.+... .+.+++.. ..........+|++|.++++++++
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 489999999999999999999999999999999998765321 12222111 111233456788988888777654
Q ss_pred ------CCCEEEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCc
Q 026852 79 ------GCDGVFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ------~~d~vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~ 144 (232)
++|++|||||. +.+.+.++|++++++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~----- 158 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG----- 158 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC-----
Confidence 67999999984 3446778899999999999999999999875 4579999999988776543
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
...|++||.+...+++.++.+ +||||++|+||.+.++...
T Consensus 159 -----------------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~ 201 (302)
T d1gz6a_ 159 -----------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET 201 (302)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh
Confidence 245888888888888888887 5999999999999887654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=1e-28 Score=205.71 Aligned_cols=223 Identities=34% Similarity=0.466 Sum_probs=164.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
-+||+||||||+|+||++++++|+++|++|++++|+.++... ..............++.+|++|.+++..+++++|+|+
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 467999999999999999999999999999999998753321 1111122223445678899999999999999999999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCCh---------
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP--------- 155 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~--------- 155 (232)
|+|+.... ...+...+++|+.|+.++++++.+..+.+++|++||+.+.+.... .....+.+|..++..
T Consensus 89 ~~a~~~~~--~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~ 165 (342)
T d1y1pa1 89 HIASVVSF--SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKP-NVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp ECCCCCSC--CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCT-TCCCCEECTTCCCHHHHHHHHHSC
T ss_pred hhcccccc--cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCC-CCCCcccccccccccccccccccc
Confidence 99986542 345677889999999999999999767899999999865543322 122333444332211
Q ss_pred -hhccccchhHHHHHHHHHHHHHHHHHhc--CCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC--CCCCccceee
Q 026852 156 -VLCKENKEWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN--IYSAAIQDRI 228 (232)
Q Consensus 156 -~~~~~~~~~y~~sK~~~~~~~~~~~~~~--~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~ 228 (232)
..+..+..+|+.||.++|.+++.|++++ ++++++++|+.++||...+.. .....++.+.+.++ ....+.+.|+
T Consensus 166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 245 (342)
T d1y1pa1 166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245 (342)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCcccee
Confidence 1112223569999999999999998875 578899999999999765433 24566777777776 4445677788
Q ss_pred eec
Q 026852 229 MIY 231 (232)
Q Consensus 229 ~~~ 231 (232)
|+|
T Consensus 246 ~v~ 248 (342)
T d1y1pa1 246 YVS 248 (342)
T ss_dssp EEE
T ss_pred eee
Confidence 887
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.9e-29 Score=203.57 Aligned_cols=173 Identities=16% Similarity=0.078 Sum_probs=140.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhh-hcCCCCceEEEEcCCCCcchHHHhhc-----
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE-LDGATERLHLFKANLLEEGSFDSAVD----- 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~----- 78 (232)
+|+||++|||||++|||++++++|+++|++|++++|+.++.+. ..++ ..........+.+|+++.+.+...++
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK-VVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999865442 2222 22335678899999998888777654
Q ss_pred --CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhC--CccEEEEecccceeccCCCCCCCcccccc
Q 026852 79 --GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVH--SIKRVVLTSSIGAMLLNETPMTPDVVIDE 149 (232)
Q Consensus 79 --~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~vSS~~~~~~~~~~~~~~~~~~e 149 (232)
.+|+++||||.. .+.+.+.+++.+++|+.++.++++.+.+.+ +.+++|++||..+..+.+.
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~---------- 159 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM---------- 159 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT----------
T ss_pred hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC----------
Confidence 579999999843 234556788999999999999999998875 3479999999987765443
Q ss_pred CCCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCC
Q 026852 150 TWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.||++.+.+.+.++.+ .||+|++|+||+|.|++.
T Consensus 160 ------------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~ 203 (269)
T d1xu9a_ 160 ------------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA 203 (269)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH
Confidence 255999999999888888876 369999999999999863
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.3e-28 Score=195.96 Aligned_cols=168 Identities=19% Similarity=0.158 Sum_probs=137.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---CCCE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 82 (232)
|+||++|||||++|||+++++.|+++|++|++++|++++ ++++.. ...+....+|+.+.+.++...+ ++|+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~-----l~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~id~ 77 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK-----LQELEK-YPGIQTRVLDVTKKKQIDQFANEVERLDV 77 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-----HGGGGG-STTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHh-ccCCceeeeecccccccccccccccccee
Confidence 899999999999999999999999999999999998743 233322 3457888999988877776654 6799
Q ss_pred EEEcccc-----cccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEeccccee-ccCCCCCCCccccccCCCC
Q 026852 83 VFHTASP-----VIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAM-LLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 83 vi~~Ag~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~-~~~~~~~~~~~~~~e~~~~ 153 (232)
+|||||. +.+.+.+.|++.+++|+.+++++++++.+.+ +.++||++||..+. .+..
T Consensus 78 lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------------- 142 (245)
T d2ag5a1 78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV--------------- 142 (245)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT---------------
T ss_pred EEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCcc---------------
Confidence 9999984 3346678999999999999999999998853 45799999987553 2221
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
....|+.+|++.+.+++.++.+ +|||||+|+||.|.||+..
T Consensus 143 -------~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~ 186 (245)
T d2ag5a1 143 -------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ 186 (245)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH
T ss_pred -------chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhH
Confidence 1355999999999999999888 5899999999999998743
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=5.3e-28 Score=200.92 Aligned_cols=210 Identities=19% Similarity=0.316 Sum_probs=156.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH-hhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS-AVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~ 86 (232)
|+||||||+|+||++++++|+++| ++|+++++..... ..+. ...+++++++|+++.+++.+ +.+++|+|||+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~-----~~~~-~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~ 74 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-----SRFL-NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-----GGGT-TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch-----hhhc-cCCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence 479999999999999999999999 5899988765322 1222 24679999999998877655 67789999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhh-ccccchh
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVL-CKENKEW 164 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~ 164 (232)
|+.... ....++...+++|+.|+.++++++.+. + .+.+++||...+..... ...++.....+.. ...+...
T Consensus 75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~-~~~~~~ss~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~ 147 (342)
T d2blla1 75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSD-----KYFDEDHSNLIVGPVNKPRWI 147 (342)
T ss_dssp BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCC-----SSBCTTTCCCBCCCTTCGGGH
T ss_pred cccccccccccCCccccccccccccccccccccc-c-ccccccccccccccccc-----cccccccccccccccCCCcch
Confidence 986432 233455788999999999999999886 4 46677888745443322 1112211111110 1122356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC-------cchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 165 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 165 y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
|+.||.++|.+++.+++++|++++++||+.+++|...... .....++.+.+.|+ ++++|.+.|+|+|
T Consensus 148 Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~ 224 (342)
T d2blla1 148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 224 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEE
T ss_pred hhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecc
Confidence 9999999999999999999999999999999999765432 13567777788888 7899999999998
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=5.9e-28 Score=200.11 Aligned_cols=211 Identities=18% Similarity=0.162 Sum_probs=154.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-----cCCCCceEEEEcCCCCcchHHHhhc--CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-----DGATERLHLFKANLLEEGSFDSAVD--GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~--~~d 81 (232)
|++|||||+|+||++++++|+++|++|++++|..+....+.++.+ ......+.++.+|+++.+.+...++ ++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 789999999999999999999999999999997543222222211 1123568899999999999999876 679
Q ss_pred EEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhh----CCccEEEEecccceeccCCCCCCCccccccCCCCChh
Q 026852 82 GVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPV 156 (232)
Q Consensus 82 ~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~ 156 (232)
+|||+|+.... ...+++...++.|+.++.++++++... ....++++.||.. .++.. ....+|+....|
T Consensus 82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~~-----~~~~~E~~~~~p- 154 (339)
T d1n7ha_ 82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGST-----PPPQSETTPFHP- 154 (339)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTS-----CSSBCTTSCCCC-
T ss_pred hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce-ecccC-----CCCCCCCCCCCC-
Confidence 99999986432 234567788999999999999888664 1234677777763 33322 122344443333
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--cchHHHHHHHHcCC----CCCCccceeeee
Q 026852 157 LCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGN----IYSAAIQDRIMI 230 (232)
Q Consensus 157 ~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~ 230 (232)
...|+.+|.++|.++..+.+.++++++++||++|+||...... ..+...+.+...+. ..+++.+.|||+
T Consensus 155 -----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~ 229 (339)
T d1n7ha_ 155 -----RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG 229 (339)
T ss_dssp -----CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred -----cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccce
Confidence 3669999999999999999999999999999999999865432 12333333433333 678899999999
Q ss_pred c
Q 026852 231 Y 231 (232)
Q Consensus 231 ~ 231 (232)
|
T Consensus 230 ~ 230 (339)
T d1n7ha_ 230 F 230 (339)
T ss_dssp E
T ss_pred e
Confidence 7
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.96 E-value=4.5e-28 Score=193.52 Aligned_cols=191 Identities=18% Similarity=0.155 Sum_probs=135.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+.|+||||||++|||++++++|+++|+ +|++.+|+.++.+ .+.+ ....+++++++|++|.++++++++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~--~l~~--~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT--ELKS--IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH--HHHT--CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHH--HHHH--hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 348999999999999999999999996 6888899986542 1222 224679999999999999888764
Q ss_pred ---CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC--------------CccEEEEecccceec
Q 026852 79 ---GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH--------------SIKRVVLTSSIGAML 135 (232)
Q Consensus 79 ---~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~iv~vSS~~~~~ 135 (232)
++|++|||||... ..+.+.+++.+++|+.|+.+++++++|.+ ..++++++|+.....
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 3799999999532 13345688999999999999999998763 125788888875554
Q ss_pred cCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC----cchH
Q 026852 136 LNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL----NFGA 208 (232)
Q Consensus 136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~----~~~~ 208 (232)
...... ........|+.||++...+++.++.+ +||+|++|+||+|.|++..... +..+
T Consensus 158 ~~~~~~---------------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~~~~~e~~a 222 (250)
T d1yo6a1 158 TDNTSG---------------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQST 222 (250)
T ss_dssp TTCCST---------------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHHH
T ss_pred cCCccc---------------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCCCCCHHHHH
Confidence 332210 00011234999999999999998887 4899999999999999865432 2334
Q ss_pred HHHHHHHc
Q 026852 209 EVILNLIN 216 (232)
Q Consensus 209 ~~~~~~~~ 216 (232)
..+.+.+.
T Consensus 223 ~~~~~~~~ 230 (250)
T d1yo6a1 223 AELISSFN 230 (250)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 44555553
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.96 E-value=2.8e-28 Score=199.05 Aligned_cols=179 Identities=19% Similarity=0.122 Sum_probs=135.5
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhc---
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
..+|+||++|||||+||||++++++|+++|++|++++|+.++.. +..+++. ....++.++++|+++.++++++++
T Consensus 20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~-~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK-ATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence 34699999999999999999999999999999999999986543 2233332 225678899999999999888764
Q ss_pred ----CCCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhh----CCccEEEEecccceeccCCCCCCCcc
Q 026852 79 ----GCDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKV----HSIKRVVLTSSIGAMLLNETPMTPDV 145 (232)
Q Consensus 79 ----~~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~vSS~~~~~~~~~~~~~~~ 145 (232)
++|++|||||.. ...+.+.+.+.+.+|+.+...+.+..... ...+.++++||..+..+.+.
T Consensus 99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~------ 172 (294)
T d1w6ua_ 99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF------ 172 (294)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT------
T ss_pred hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc------
Confidence 679999999853 22445667888999999988887665443 24467788888766554332
Q ss_pred ccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCC
Q 026852 146 VIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL 204 (232)
Q Consensus 146 ~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~ 204 (232)
...|+.+|++.+.+++.++.+ +|||||+|+||+|.||+.....
T Consensus 173 ----------------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~ 218 (294)
T d1w6ua_ 173 ----------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL 218 (294)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc
Confidence 245899999999998888877 5899999999999999865443
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=7.4e-28 Score=197.78 Aligned_cols=196 Identities=17% Similarity=0.187 Sum_probs=144.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 85 (232)
.|+||||||+|+||++++++|+++|+.|+++++..+ +|+++.+.+..+++ ++|.|+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------------~~~~~~~~~~~~~~~~~~d~v~~ 60 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------LNLLDSRAVHDFFASERIDQVYL 60 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------------ccccCHHHHHHHHhhcCCCEEEE
Confidence 378999999999999999999999999887643321 57888888888875 5899999
Q ss_pred ccccccc--CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 86 TASPVIF--LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 86 ~Ag~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
+|+.... .......+.+++|+.||.++++++.+. +.+++||+||+.. |+... ..+.+|+....... .....
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~v-yg~~~----~~~~~E~~~~~~~~-~~~~~ 133 (315)
T d1e6ua_ 61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCI-YPKLA----KQPMAESELLQGTL-EPTNE 133 (315)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGG-SCTTC----CSSBCGGGTTSSCC-CGGGH
T ss_pred cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceE-cCCCC----CCCccCCccccCCC-CCCCC
Confidence 9975432 223455677899999999999999988 7899999999955 44333 22333332221110 11135
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc--chHH------HHHHHHcCC---CCCCccceeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAE------VILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~--~~~~------~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
+|+.||.++|++++.+.+++|++++++||++|+||....... .... .......+. +++++.+.|+|+|
T Consensus 134 ~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~ 212 (315)
T d1e6ua_ 134 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLH 212 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEE
Confidence 699999999999999999999999999999999998754322 1111 112233333 7889999999987
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=5e-29 Score=199.28 Aligned_cols=164 Identities=14% Similarity=0.043 Sum_probs=132.0
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-------CCCE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDG 82 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~ 82 (232)
++|||||++|||+++++.|+++|++|++++|+.++.+ .++... ..+.++|+++.++++++++ ++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~--~~~~~~-----~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD--ELEAFA-----ETYPQLKPMSEQEPAELIEAVTSAYGQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH--HHHHHH-----HHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHhhh-----CcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999999999999999999999876543 222221 1244689999998888765 6799
Q ss_pred EEEccccc------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCC
Q 026852 83 VFHTASPV------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFS 153 (232)
Q Consensus 83 vi~~Ag~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~ 153 (232)
+|||||.. .+.+.++|++.+++|+.+++++++++.+.| +.++||++||..+..+.+.
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~-------------- 140 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE-------------- 140 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT--------------
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc--------------
Confidence 99999842 235567899999999999999999998874 4589999999977654432
Q ss_pred ChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 154 NPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 154 ~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
...|+.||.+...+++.++.+ +|||||+|+||+|.|++...
T Consensus 141 --------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~ 184 (252)
T d1zmta1 141 --------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPY 184 (252)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCS
T ss_pred --------ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhh
Confidence 245888888888888888877 58999999999999998654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=8e-28 Score=191.77 Aligned_cols=175 Identities=18% Similarity=0.183 Sum_probs=136.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 78 (232)
+++||++|||||++|||++++++|+++|++|++++|+.++.+ +..+++ ..+.....+|+.+.+.++..+.
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF 77 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH-HHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHh---CCCccccccccccccccccccccccccc
Confidence 689999999999999999999999999999999999987654 333344 3467888999998887766654
Q ss_pred -CCCEEEEccccc-----------ccCCCCchhhhhHHHHHHHHHHHHHHHhhC---------CccEEEEecccceeccC
Q 026852 79 -GCDGVFHTASPV-----------IFLSDNPQADIVDPAVMGTLNVLRSCAKVH---------SIKRVVLTSSIGAMLLN 137 (232)
Q Consensus 79 -~~d~vi~~Ag~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~vSS~~~~~~~ 137 (232)
..|.++++++.. .+.+.+.|++++++|+.+++++++++.+.+ +.++||++||..+..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~ 157 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence 458888887531 123346788999999999999999998752 33689999999887654
Q ss_pred CCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCCCc
Q 026852 138 ETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN 205 (232)
Q Consensus 138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~~~ 205 (232)
+. ...|+.||++.+.+++.++.+ +|||+|+|+||++.|++.....+
T Consensus 158 ~~----------------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~ 206 (248)
T d2o23a1 158 VG----------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE 206 (248)
T ss_dssp TT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred CC----------------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH
Confidence 43 245999999999999988887 58999999999999998765443
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=8.1e-27 Score=194.09 Aligned_cols=212 Identities=19% Similarity=0.140 Sum_probs=150.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc-----chhhhhhhc-CCCCceEEEEcCCCCcchHHHhhcCC--
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-----KTEHLRELD-GATERLHLFKANLLEEGSFDSAVDGC-- 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-- 80 (232)
|+||||||+|+||++++++|+++|++|+++++..... ..+..+.+. ....++.++++|++|.+.+.+++.+.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 6899999999999999999999999999997522111 011222111 12467899999999999999988754
Q ss_pred CEEEEcccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhcc
Q 026852 81 DGVFHTASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCK 159 (232)
Q Consensus 81 d~vi~~Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 159 (232)
++++|+|+... ..+..++.+.+++|+.|+.++++++.+. +.++++++||+..+ +..... ....+....
T Consensus 83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~-~~~~~~---~~~~~~~~~------ 151 (346)
T d1ek6a_ 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVY-GNPQYL---PLDEAHPTG------ 151 (346)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGG-CSCSSS---SBCTTSCCC------
T ss_pred ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceee-eccccc---ccccccccc------
Confidence 68999998543 2334456788999999999999999887 78999999999554 333211 111111111
Q ss_pred ccchhHHHHHHHHHHHHHHHHHh-cCCcEEEEccCceeCCCCCCC--------CcchHHHHHHHHcCC-----------C
Q 026852 160 ENKEWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGN-----------I 219 (232)
Q Consensus 160 ~~~~~y~~sK~~~~~~~~~~~~~-~~i~~~~v~pg~v~g~~~~~~--------~~~~~~~~~~~~~~~-----------~ 219 (232)
....+|+.+|..+|..+..+++. .+++.+++||+.++||..... .......+.+...+. .
T Consensus 152 ~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~ 231 (346)
T d1ek6a_ 152 GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYD 231 (346)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred ccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCccc
Confidence 11356999999999999887775 599999999999999865321 122333444433222 3
Q ss_pred CCCccceeeeec
Q 026852 220 YSAAIQDRIMIY 231 (232)
Q Consensus 220 ~~~~~~~~~~~~ 231 (232)
..++.|.|||+|
T Consensus 232 ~~~g~~~Rdfi~ 243 (346)
T d1ek6a_ 232 TEDGTGVRDYIH 243 (346)
T ss_dssp SSSSSCEECEEE
T ss_pred CCCCCeeEeEEE
Confidence 457999999997
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.95 E-value=1.3e-26 Score=193.08 Aligned_cols=214 Identities=21% Similarity=0.188 Sum_probs=157.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 83 (232)
.++|+||||||+|+||++++++|+++|++|++++|+..+... ..+.. ....+++++++|++|++.+.++++ .+|+|
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v 83 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-LFETA-RVADGMQSEIGDIRDQNKLLESIREFQPEIV 83 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-HHHHT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHH-HHhhh-hcccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence 578999999999999999999999999999999998765432 22222 224579999999999999999887 56999
Q ss_pred EEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccc
Q 026852 84 FHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENK 162 (232)
Q Consensus 84 i~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 162 (232)
+|+|+.... .+...+...+++|+.|+.++++++........+++.||. ..+..... ....+++....| .
T Consensus 84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~-~~~~~~~~---~~~~~~~~~~~p------~ 153 (356)
T d1rkxa_ 84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEW---IWGYRENEAMGG------Y 153 (356)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCS---SSCBCTTSCBCC------S
T ss_pred hhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccc-cccccccc---ccccccccccCC------C
Confidence 999986432 234567889999999999999999987455556666655 33332221 222233322222 3
Q ss_pred hhHHHHHHHHHHHHHHHHHh---------cCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC--CCCCccceeeeec
Q 026852 163 EWYSLAKTLAEEAAWKFAKE---------NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN--IYSAAIQDRIMIY 231 (232)
Q Consensus 163 ~~y~~sK~~~~~~~~~~~~~---------~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (232)
.+|+.+|...+..+..++.+ +++.++++||+.++||........++.++.....+. +++.+.+.|+|+|
T Consensus 154 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (356)
T d1rkxa_ 154 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH 233 (356)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccc
Confidence 56999999999888776653 478899999999999986554334444454555444 7889999999987
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.95 E-value=1.9e-26 Score=194.48 Aligned_cols=188 Identities=20% Similarity=0.165 Sum_probs=137.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHH-CCCeEEEEEcCC---CCc---c--hhh---hhhh-----cCCCCceEEEEcCCCCc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDP---NSP---K--TEH---LREL-----DGATERLHLFKANLLEE 70 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~r~~---~~~---~--~~~---~~~~-----~~~~~~~~~~~~D~~~~ 70 (232)
+|+||||||+||||++++++|++ .|++|+++|+-. ... . ... +... ......+.++++|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 46899999999999999999996 689999997411 100 0 011 1110 11134678999999999
Q ss_pred chHHHhhc---CCCEEEEccccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCC---CC
Q 026852 71 GSFDSAVD---GCDGVFHTASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPM---TP 143 (232)
Q Consensus 71 ~~~~~~~~---~~d~vi~~Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~---~~ 143 (232)
+.+.++++ ++|+|||+|+.... .....+...++.|+.++.++++++... +.++++++||...+ +..... .+
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~~-~~~~~~~~~~~ 159 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIF-GNPTMGSVSTN 159 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGT-BSCCC-----C
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccccccccccc-ccccccccccc
Confidence 99999886 57999999986432 233455678899999999999999987 77899999888443 333211 11
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~ 203 (232)
..+..|+... .+...|+.+|.++|.+++.+.+.+|++++++||++++||.....
T Consensus 160 ~~~~~e~~~~------~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~ 213 (383)
T d1gy8a_ 160 AEPIDINAKK------SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGD 213 (383)
T ss_dssp CCCBCTTSCC------BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSS
T ss_pred ccccccccCC------CCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcccc
Confidence 1223333222 22466999999999999999999999999999999999987654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.94 E-value=1.6e-27 Score=188.67 Aligned_cols=184 Identities=17% Similarity=0.096 Sum_probs=138.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-------c-
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------D- 78 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~- 78 (232)
++|+||||||+||||+++++.|+++|++|++++|++.... .....+++|..+.++.+.+. .
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGD 69 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------cccceeecccCcHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999999999998775321 23345566776565554432 1
Q ss_pred -CCCEEEEcccccc------cCCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccC
Q 026852 79 -GCDGVFHTASPVI------FLSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDET 150 (232)
Q Consensus 79 -~~d~vi~~Ag~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~ 150 (232)
++|++|||||... ..+.+.|++.+++|+.++.++++++.+++ ..++||++||..+..+.+.
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~----------- 138 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG----------- 138 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC-----------
Confidence 4799999998421 12245678899999999999999999975 3479999999977654432
Q ss_pred CCCChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCCCCC-----------CcchHHHHHHH
Q 026852 151 WFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPI-----------LNFGAEVILNL 214 (232)
Q Consensus 151 ~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~~~~-----------~~~~~~~~~~~ 214 (232)
...|++||++.+.+++.++.+ +||+|++|+||+++||+.+.. .+.++..+..+
T Consensus 139 -----------~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l 207 (236)
T d1dhra_ 139 -----------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDW 207 (236)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHH
T ss_pred -----------CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHHHH
Confidence 255999999999999999876 379999999999999874321 12345556666
Q ss_pred HcCC-CCCCc
Q 026852 215 INGN-IYSAA 223 (232)
Q Consensus 215 ~~~~-~~~~~ 223 (232)
+.+. .+-+|
T Consensus 208 ~s~~~~~i~G 217 (236)
T d1dhra_ 208 ITGNKRPNSG 217 (236)
T ss_dssp HTTTTCCCTT
T ss_pred hCCCccCCCC
Confidence 6665 44444
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.94 E-value=2.6e-26 Score=189.60 Aligned_cols=220 Identities=16% Similarity=0.150 Sum_probs=156.4
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC--CCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~A 87 (232)
+||||||+|+||++++++|+++|++|+++++-......+.++.+.. ..+++++++|++|.+.+.+++++ +|+|||+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 6999999999999999999999999999875433322233443333 46789999999999999999875 59999999
Q ss_pred ccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccc---cccCCCCChhh---ccc
Q 026852 88 SPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVV---IDETWFSNPVL---CKE 160 (232)
Q Consensus 88 g~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~---~~e~~~~~~~~---~~~ 160 (232)
+.... ....++...+++|+.||.++++++.+. +.+++++.||....++.....+.... ......+.... ...
T Consensus 81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T d1orra_ 81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 159 (338)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred ccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence 86533 234466889999999999999999998 56666666666566554432111100 00001111111 112
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCc--chHHHHHHHHc-----CC---CCCCccceeeee
Q 026852 161 NKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLIN-----GN---IYSAAIQDRIMI 230 (232)
Q Consensus 161 ~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~--~~~~~~~~~~~-----~~---~~~~~~~~~~~~ 230 (232)
....|+.+|...+.+...+.+.+++....++|..++++....... ....++...+. ++ ++++|.+.|+|+
T Consensus 160 ~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~ 239 (338)
T d1orra_ 160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL 239 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence 346699999999999999888899999999999999877644322 23444444332 33 788999999999
Q ss_pred c
Q 026852 231 Y 231 (232)
Q Consensus 231 ~ 231 (232)
|
T Consensus 240 ~ 240 (338)
T d1orra_ 240 H 240 (338)
T ss_dssp E
T ss_pred c
Confidence 7
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.93 E-value=1.8e-26 Score=182.49 Aligned_cols=159 Identities=19% Similarity=0.144 Sum_probs=124.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh---------cC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---------DG 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---------~~ 79 (232)
.+||||||++|||++++++|+++|++|++++|++.... .....+.+|+.+.+...... .+
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999876422 12344556776555443322 24
Q ss_pred CCEEEEccccccc------CCCCchhhhhHHHHHHHHHHHHHHHhhC-CccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 80 CDGVFHTASPVIF------LSDNPQADIVDPAVMGTLNVLRSCAKVH-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 80 ~d~vi~~Ag~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|++|||||.... ...+.++..+++|+.+++++++++.+.+ ..++||++||..+..+.+.
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------- 138 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS------------- 138 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-------------
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc-------------
Confidence 7999999995321 1124577889999999999999999975 3479999999977765433
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHh-----cCCcEEEEccCceeCCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~-----~~i~~~~v~pg~v~g~~~ 200 (232)
...|++||++.+.+.+.++.+ .+|++++|+||++.||+.
T Consensus 139 ---------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~ 182 (235)
T d1ooea_ 139 ---------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN 182 (235)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH
T ss_pred ---------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcch
Confidence 356999999999999999877 378999999999999864
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.93 E-value=3.9e-26 Score=182.96 Aligned_cols=169 Identities=21% Similarity=0.243 Sum_probs=135.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcc--hhhhhhhcCCCCceEEEEcCCCCcchHHHhhcC----
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK--TEHLRELDGATERLHLFKANLLEEGSFDSAVDG---- 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---- 79 (232)
+++++|||||+||||++++++|+++|+ +|++++|+....+ .+..+++...+.++.+++||++|.+++.++++.
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 567999999999999999999999998 5888999743222 233445554567899999999999999998764
Q ss_pred --CCEEEEccccc-----ccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCC
Q 026852 80 --CDGVFHTASPV-----IFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWF 152 (232)
Q Consensus 80 --~d~vi~~Ag~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~ 152 (232)
+|.||||||.. .+.+.+.++..+++|+.++.++.+++.+. +.++||++||..+..+.+.
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~~------------- 153 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPG------------- 153 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT-------------
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeecchhhccCCcc-------------
Confidence 58999999853 33556678889999999999999988776 6789999999988876654
Q ss_pred CChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 153 SNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 153 ~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
...|+++|.+.+.+++.++. .|+++++|+||.+.+++
T Consensus 154 ---------~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 154 ---------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSG 190 (259)
T ss_dssp ---------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---
T ss_pred ---------cHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCc
Confidence 23499999999999877754 59999999999987654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=3.3e-25 Score=177.37 Aligned_cols=176 Identities=17% Similarity=0.168 Sum_probs=136.9
Q ss_pred CCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 4 GEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
+.|+||++|||||+| |||+++++.|+++|++|++.+|+++.. +..++......+...++.|+.+.+++...++
T Consensus 1 g~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 1 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK--GRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH--HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHHhhcCCcceeecccchHHHHHHHHHHhh
Confidence 368999999999999 899999999999999999999986533 2333333334567788999999888777764
Q ss_pred ----CCCEEEEccccccc----------CCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecccceeccCCCCCCC
Q 026852 79 ----GCDGVFHTASPVIF----------LSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
..|++||+|+.... ...+.+...+++|+.+...+++.+.+.+. .+.||++||..+..+.+.
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~---- 154 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN---- 154 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----
T ss_pred hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC----
Confidence 45999999974211 23344677888999999999999888753 356888888866654332
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.||++.+.+++.++.+ +|||||+|+||.|.|++....
T Consensus 155 ------------------~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 199 (258)
T d1qsga_ 155 ------------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI 199 (258)
T ss_dssp ------------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc
Confidence 245999999999999888887 589999999999999987654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.7e-23 Score=161.82 Aligned_cols=156 Identities=19% Similarity=0.221 Sum_probs=121.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.+|+|+||||+|+||++++++|+++|++|+++.|++++... . ...+++++++|++|.+++.++++++|+|||+
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-----~--~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~ 74 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----E--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVL 74 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----S--SCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-----c--cccccccccccccchhhHHHHhcCCCEEEEE
Confidence 34899999999999999999999999999999999865322 1 1356889999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
+|..... ...+++..++.++++++.+. +.+|+|++||.+....... .+ .....|.
T Consensus 75 ~g~~~~~------~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~~--------------~~----~~~~~~~ 129 (205)
T d1hdoa_ 75 LGTRNDL------SPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK--------------VP----PRLQAVT 129 (205)
T ss_dssp CCCTTCC------SCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC--------------SC----GGGHHHH
T ss_pred eccCCch------hhhhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCcc--------------cc----ccccccc
Confidence 9864321 12346778999999999887 8899999999855432111 00 0113477
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
..|..+++++ ++.+++++++|||.+.+.
T Consensus 130 ~~~~~~e~~l----~~~~~~~tiirp~~~~~~ 157 (205)
T d1hdoa_ 130 DDHIRMHKVL----RESGLKYVAVMPPHIGDQ 157 (205)
T ss_dssp HHHHHHHHHH----HHTCSEEEEECCSEEECC
T ss_pred hHHHHHHHHH----HhcCCceEEEecceecCC
Confidence 7787777765 367999999999999743
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=2.6e-24 Score=170.19 Aligned_cols=161 Identities=23% Similarity=0.205 Sum_probs=125.9
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc------CCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCD 81 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d 81 (232)
+|++|||||++|||+++++.|+++|++|++++|+++.. +...+++|+++......+.. ..+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------------SSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------------cceEeeccccchhhhHHHHHhhhcccccc
Confidence 48999999999999999999999999999999987532 34678899998887777654 235
Q ss_pred EEEEccccc---------ccCCCCchhhhhHHHHHHHHHHHHHHHhh------C---CccEEEEecccceeccCCCCCCC
Q 026852 82 GVFHTASPV---------IFLSDNPQADIVDPAVMGTLNVLRSCAKV------H---SIKRVVLTSSIGAMLLNETPMTP 143 (232)
Q Consensus 82 ~vi~~Ag~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~---~~~~iv~vSS~~~~~~~~~~~~~ 143 (232)
.++++++.. .....+.+++.+++|+.+...+++.+.+. + +.++||++||..+..+.+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~---- 143 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---- 143 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT----
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC----
Confidence 555555421 11334567889999999999999887664 1 3469999999988766543
Q ss_pred ccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 144 DVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 144 ~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.+|++.+.+++.++.+ +|||||+|+||+|.|++....
T Consensus 144 ------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 188 (241)
T d1uaya_ 144 ------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL 188 (241)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS
T ss_pred ------------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh
Confidence 245888999888888888887 589999999999999875443
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.91 E-value=3.8e-24 Score=171.91 Aligned_cols=173 Identities=13% Similarity=0.125 Sum_probs=127.7
Q ss_pred CCCCCCcEEEEECC--CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--
Q 026852 3 SGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (232)
Q Consensus 3 ~~~~~~~~ilItGa--~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-- 78 (232)
+++|+||++||||| ++|||++++++|+++|++|++++|+..+..+...++ ...+...+++|+++.+++.++++
T Consensus 1 ~~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~---~~~~~~~~~~dv~~~~~~~~~~~~v 77 (268)
T d2h7ma1 1 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRV 77 (268)
T ss_dssp CCTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH---cCCceeeEeeecccccccccccchh
Confidence 46799999999995 568999999999999999999999875332112222 24567788999999987766644
Q ss_pred --------CCCEEEEcccccc----------cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCC
Q 026852 79 --------GCDGVFHTASPVI----------FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETP 140 (232)
Q Consensus 79 --------~~d~vi~~Ag~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~ 140 (232)
.+|+++||||... +.+.+.+...+++|+.......+...+....+.+++++|.....+.+.
T Consensus 78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~- 156 (268)
T d2h7ma1 78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA- 156 (268)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT-
T ss_pred hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc-
Confidence 3599999998421 123345566778888888888888777654455555555534333221
Q ss_pred CCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCC
Q 026852 141 MTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 200 (232)
Q Consensus 141 ~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~ 200 (232)
...|+.+|.+.+.+++.++.+ +|||||+|+||.|.|++.
T Consensus 157 ---------------------~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~ 198 (268)
T d2h7ma1 157 ---------------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAM 198 (268)
T ss_dssp ---------------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHH
T ss_pred ---------------------cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhh
Confidence 255999999999999888887 589999999999998753
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.3e-23 Score=165.60 Aligned_cols=159 Identities=21% Similarity=0.136 Sum_probs=127.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|++|+||||||||+||++++++|++.|+ +|++++|++.+..... ..++.+..+|+.+.+++.++++++|++
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-------~~~i~~~~~D~~~~~~~~~~~~~~d~v 84 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG 84 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-------cceeeeeeecccccccccccccccccc
Confidence 4668999999999999999999999995 7999999875433211 245778889999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
||+||.... .....+..++|+.++.++++++.+. +.+++|++||.... +.. ..
T Consensus 85 i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~-~~~-----------------------~~ 137 (232)
T d2bkaa1 85 FCCLGTTRG--KAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGAD-KSS-----------------------NF 137 (232)
T ss_dssp EECCCCCHH--HHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCC-TTC-----------------------SS
T ss_pred ccccccccc--ccchhhhhhhcccccceeeeccccc-CccccccCCccccc-cCc-----------------------cc
Confidence 999985421 2334567889999999999999887 78999999999543 211 14
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCc-EEEEccCceeCCCCCC
Q 026852 164 WYSLAKTLAEEAAWKFAKENGID-LVAIHPGTVIGPFFQP 202 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~-~~~v~pg~v~g~~~~~ 202 (232)
.|+.+|..+|..+. +.+.+ ++++|||.++|+..+.
T Consensus 138 ~Y~~~K~~~E~~l~----~~~~~~~~IlRP~~i~G~~~~~ 173 (232)
T d2bkaa1 138 LYLQVKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQES 173 (232)
T ss_dssp HHHHHHHHHHHHHH----TTCCSEEEEEECCEEECTTGGG
T ss_pred hhHHHHHHhhhccc----cccccceEEecCceeecCCCcC
Confidence 59999999998763 45664 8899999999987543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.90 E-value=2.1e-23 Score=168.15 Aligned_cols=176 Identities=16% Similarity=0.150 Sum_probs=120.8
Q ss_pred CCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc---
Q 026852 4 GEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (232)
Q Consensus 4 ~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 78 (232)
++|+||++|||||+| |||+++++.|+++|++|++++|+++.. +.++++........++++|+++.+++.++++
T Consensus 1 g~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~--~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (274)
T d2pd4a1 1 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE--KRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVK 78 (274)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH--HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHhhCCceeEeeecccchhhHHHHHHHHH
Confidence 368999999999876 899999999999999999999996432 3344444445567789999999999888774
Q ss_pred ----CCCEEEEccccccc------CCCCchhhhhH---HHHHHHHHHHHHHHhhCCccE-EEEecccceeccCCCCCCCc
Q 026852 79 ----GCDGVFHTASPVIF------LSDNPQADIVD---PAVMGTLNVLRSCAKVHSIKR-VVLTSSIGAMLLNETPMTPD 144 (232)
Q Consensus 79 ----~~d~vi~~Ag~~~~------~~~~~~~~~~~---~n~~~~~~l~~~~~~~~~~~~-iv~vSS~~~~~~~~~~~~~~ 144 (232)
.+|++|||+|.... ...+.+..... .+........+...+.++.++ |+++|+.+...+...
T Consensus 79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~----- 153 (274)
T d2pd4a1 79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH----- 153 (274)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----
T ss_pred HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc-----
Confidence 56999999985321 11222222222 222233344444444433344 555555543322211
Q ss_pred cccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCCC
Q 026852 145 VVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI 203 (232)
Q Consensus 145 ~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~~ 203 (232)
...|+.+|.+.+.+++.++.+ +|||+|+|+||.+.|++....
T Consensus 154 -----------------~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~ 198 (274)
T d2pd4a1 154 -----------------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI 198 (274)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS
T ss_pred -----------------chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc
Confidence 245889999998888888777 589999999999999986543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.90 E-value=3e-23 Score=169.02 Aligned_cols=181 Identities=13% Similarity=0.051 Sum_probs=122.5
Q ss_pred CCCCCCCcEEEEECCCC--hhHHHHHHHHHHCCCeEEEEEcCCCCcchh-h-------hhhhc---CCCCceEEEEcCC-
Q 026852 2 MSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTE-H-------LRELD---GATERLHLFKANL- 67 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g--~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~-~-------~~~~~---~~~~~~~~~~~D~- 67 (232)
|..+|+||++|||||+| |||+++++.|+++|++|++++|++...... . ..... .....-....+|.
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 66789999999999876 999999999999999999999875311100 0 00000 0011112233332
Q ss_pred -------------------CCcchHHHhh-------cCCCEEEEcccc-------cccCCCCchhhhhHHHHHHHHHHHH
Q 026852 68 -------------------LEEGSFDSAV-------DGCDGVFHTASP-------VIFLSDNPQADIVDPAVMGTLNVLR 114 (232)
Q Consensus 68 -------------------~~~~~~~~~~-------~~~d~vi~~Ag~-------~~~~~~~~~~~~~~~n~~~~~~l~~ 114 (232)
++.+.+++++ .++|++|||||. +.+.+.++|...+++|+.+++++++
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 2333334443 367999999984 2335667789999999999999999
Q ss_pred HHHhhCC-ccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEE
Q 026852 115 SCAKVHS-IKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVA 189 (232)
Q Consensus 115 ~~~~~~~-~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~ 189 (232)
++.+.+. .++++.+++......... ....|+.+|++...+.+.++.+ +|||+|+
T Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~ 220 (297)
T d1d7oa_ 162 HFLPIMNPGGASISLTYIASERIIPG---------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT 220 (297)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSCCTT---------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHhhcCCcceeeeehhhcccccc---------------------cccceecccccccccccccchhccccceEEecc
Confidence 9988753 345666666544322111 1234888888887776655554 5899999
Q ss_pred EccCceeCCCCCCC
Q 026852 190 IHPGTVIGPFFQPI 203 (232)
Q Consensus 190 v~pg~v~g~~~~~~ 203 (232)
|+||++.|++....
T Consensus 221 I~PG~i~T~~~~~~ 234 (297)
T d1d7oa_ 221 ISAGPLGSRAAKAI 234 (297)
T ss_dssp EEECCCBCCCSSCC
T ss_pred cccccccchhhhhc
Confidence 99999999987643
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.90 E-value=2.8e-23 Score=171.73 Aligned_cols=172 Identities=12% Similarity=0.121 Sum_probs=124.7
Q ss_pred CCcEEEEEC--CCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-----------hhhhhhcCCCCceEEEEc--------
Q 026852 7 EEKVVCVTG--ASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-----------EHLRELDGATERLHLFKA-------- 65 (232)
Q Consensus 7 ~~~~ilItG--a~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~~-------- 65 (232)
++|++|||| +++|||+++++.|+++|++|++.+++...... +................+
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 368999999 66899999999999999999999876532110 000000000112233333
Q ss_pred ------------CCCCcchHHHhhc-------CCCEEEEccccc-------ccCCCCchhhhhHHHHHHHHHHHHHHHhh
Q 026852 66 ------------NLLEEGSFDSAVD-------GCDGVFHTASPV-------IFLSDNPQADIVDPAVMGTLNVLRSCAKV 119 (232)
Q Consensus 66 ------------D~~~~~~~~~~~~-------~~d~vi~~Ag~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 119 (232)
|+++.++++++++ ++|++|||||.. .+.+.++|+..+++|+.++.++++.+.+.
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 5556666666544 679999999842 33556789999999999999999999998
Q ss_pred C-CccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh----cCCcEEEEccCc
Q 026852 120 H-SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGT 194 (232)
Q Consensus 120 ~-~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~----~~i~~~~v~pg~ 194 (232)
+ ..++||++||.++..+.+. | .+.|+.+|++.+.+++.++.+ +|||||+|+||.
T Consensus 161 m~~~GsIv~iss~~~~~~~p~-----------------y----~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~ 219 (329)
T d1uh5a_ 161 MKPQSSIISLTYHASQKVVPG-----------------Y----GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP 219 (329)
T ss_dssp EEEEEEEEEEECGGGTSCCTT-----------------C----TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred cccccccccceeehhcccccc-----------------c----chhhhhhhccccccchhhHHHHhcccCcEEEEEecCc
Confidence 6 3479999998866544322 1 134899999999998888765 489999999999
Q ss_pred eeCCC
Q 026852 195 VIGPF 199 (232)
Q Consensus 195 v~g~~ 199 (232)
|.|+.
T Consensus 220 i~T~a 224 (329)
T d1uh5a_ 220 LKSRA 224 (329)
T ss_dssp CCCTT
T ss_pred ccchh
Confidence 99953
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.89 E-value=4.6e-23 Score=166.77 Aligned_cols=168 Identities=17% Similarity=0.104 Sum_probs=116.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCc-----------------eEEEEcCCCCc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATER-----------------LHLFKANLLEE 70 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~D~~~~ 70 (232)
.++|||||++|||+++++.|+++|++|++++|+.........+++.. .... ...+.+|+++.
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 58999999999999999999999999999988764332222222211 1122 33456678888
Q ss_pred chHHHhhc-------CCCEEEEccccccc-----CCCCch--------------hhhhHHHHHHHHHHHHHHHhh-----
Q 026852 71 GSFDSAVD-------GCDGVFHTASPVIF-----LSDNPQ--------------ADIVDPAVMGTLNVLRSCAKV----- 119 (232)
Q Consensus 71 ~~~~~~~~-------~~d~vi~~Ag~~~~-----~~~~~~--------------~~~~~~n~~~~~~l~~~~~~~----- 119 (232)
++++++++ ++|++|||||.... .+.+.+ ...+++|+.+++.+.+.+.+.
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 88888764 68999999985322 222222 246889999999999887653
Q ss_pred ----CCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEcc
Q 026852 120 ----HSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHP 192 (232)
Q Consensus 120 ----~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~p 192 (232)
.+.++||+++|.....+... ...|+.||.+.+.+++.++.+ +|||+|+|+|
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P 220 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQPLLG----------------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 220 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred HHhcCCCCcccccccccccCCccc----------------------eeeeccccccchhhhHHHHHHhCCcccccccccc
Confidence 12357888888865544322 244888999888888888876 5999999999
Q ss_pred CceeCC
Q 026852 193 GTVIGP 198 (232)
Q Consensus 193 g~v~g~ 198 (232)
|++.+.
T Consensus 221 G~t~~~ 226 (284)
T d1e7wa_ 221 GLSVLV 226 (284)
T ss_dssp SSBCCG
T ss_pred cccccc
Confidence 986543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.87 E-value=7e-22 Score=158.24 Aligned_cols=171 Identities=20% Similarity=0.209 Sum_probs=119.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcC-CCCceEEEEcCCCCcch----HHHhh------
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGS----FDSAV------ 77 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~----~~~~~------ 77 (232)
.++|||||++|||++++++|+++|++|++++|+.++..++..+++.. ...+....++|+.+..+ +.+++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999976443333333332 24567777777765433 33332
Q ss_pred -cCCCEEEEcccccccCC----------------CCchhhhhHHHHHHHHHHHHHHHhhC--------CccEEEEecccc
Q 026852 78 -DGCDGVFHTASPVIFLS----------------DNPQADIVDPAVMGTLNVLRSCAKVH--------SIKRVVLTSSIG 132 (232)
Q Consensus 78 -~~~d~vi~~Ag~~~~~~----------------~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~iv~vSS~~ 132 (232)
.++|++|||||...... +..+...+..|+.+.....+...+.+ ....++++|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 36899999999532110 11234456667777776666655542 224667777775
Q ss_pred eeccCCCCCCCccccccCCCCChhhccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCC
Q 026852 133 AMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 133 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~ 201 (232)
+..+.+. ...|+.||++.+.+++.++.+ +|||||+|+||++.||...
T Consensus 162 ~~~~~~~----------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~ 211 (266)
T d1mxha_ 162 TDLPLPG----------------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM 211 (266)
T ss_dssp GGSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS
T ss_pred ccccCcc----------------------hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC
Confidence 5433322 255999999999999888887 5899999999999998654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.1e-20 Score=153.04 Aligned_cols=203 Identities=18% Similarity=0.201 Sum_probs=124.3
Q ss_pred EEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEE-cCCCCcchHHHhhcCCCEEEEccc
Q 026852 11 VCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFK-ANLLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
||||||+||||++++++|+++|+ +|+++++-........+.+. ....... .|..+.......+..+++|+|.|+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL----NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS----CCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc----chhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence 89999999999999999999996 67777643322111111111 1111111 111111111222346799999997
Q ss_pred ccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHHHH
Q 026852 89 PVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYSLA 168 (232)
Q Consensus 89 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~~s 168 (232)
.... ...+.....+.|+.++.++++++... +.+ +++.||....++...... .++... .....|+.+
T Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~~~-----~~~~~~------~~~~~Y~~~ 143 (307)
T d1eq2a_ 78 CSST-TEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSDFI-----ESREYE------KPLNVYGYS 143 (307)
T ss_dssp CCCT-TCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSCBC-----SSGGGC------CCSSHHHHH
T ss_pred cccc-cccccccccccccccccccccccccc-ccc-cccccccccccccccccc-----cccccc------ccccccccc
Confidence 5432 34455677888899999999998887 554 566666545544332111 111111 123569999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCC--c-chHHHHHHHHcCC----CCCCccceeeeec
Q 026852 169 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--N-FGAEVILNLINGN----IYSAAIQDRIMIY 231 (232)
Q Consensus 169 K~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~--~-~~~~~~~~~~~~~----~~~~~~~~~~~~~ 231 (232)
|.++|.+++.+..+++++++++||+.++||...... . ....+..++..++ ..+++.+.|+|+|
T Consensus 144 K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~ 213 (307)
T d1eq2a_ 144 KFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 213 (307)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred cchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeee
Confidence 999999999999999999999999999999875432 2 2334444455555 4578899999987
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.85 E-value=8.5e-21 Score=152.40 Aligned_cols=180 Identities=16% Similarity=0.026 Sum_probs=131.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||||+||++++++|.++|++|++++|+. +|++|.++++++++ ++|+|||+
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~~~d~vih~ 59 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVINC 59 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence 5799999999999999999999999999998763 47889999999887 57999999
Q ss_pred cccccc-CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVIF-LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
|+.... .....+...+..|+.....+.+.+... ...+++.||...+ +... ..+..|...+.+. ..|
T Consensus 60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~-~~~~----~~~~~e~~~~~~~------~~~ 126 (281)
T d1vl0a_ 60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVF-DGEA----KEPITEFDEVNPQ------SAY 126 (281)
T ss_dssp CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGS-CSCC----SSCBCTTSCCCCC------SHH
T ss_pred ccccccccccccchhhcccccccccccccccccc--cccccccccceee-eccc----cccccccccccch------hhh
Confidence 986432 234455677888999998888887775 3567777777443 3322 2333444433332 448
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC-CCCCccceeeeec
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN-IYSAAIQDRIMIY 231 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (232)
+.+|...+.+++ +++.+.+++||++++||.. .....++.....+. ....+.+.|+|+|
T Consensus 127 ~~~k~~~e~~~~----~~~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 185 (281)
T d1vl0a_ 127 GKTKLEGENFVK----ALNPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTS 185 (281)
T ss_dssp HHHHHHHHHHHH----HHCSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEE
T ss_pred hhhhhHHHHHHH----HhCCCccccceeEEeCCCc----ccccchhhhhccCCceeecCCceeccch
Confidence 999998887763 5688999999999999974 23444555555555 3333457888876
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.81 E-value=9.6e-20 Score=144.96 Aligned_cols=175 Identities=17% Similarity=0.160 Sum_probs=107.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--------cC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--------DG 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~~ 79 (232)
+|+||||||++|||++++++|+++|++|++++|++.+. .+|+.+.+...... ..
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~~~~ 62 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------------IADLSTAEGRKQAIADVLAKCSKG 62 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------------ECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------------HHHhcCHHHHHHHHHHHHHHhCCC
Confidence 37999999999999999999999999999999986532 23555444443322 25
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhC---CccEEEEecccceeccCCCCCCCccccccCCCCCh-
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVH---SIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNP- 155 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~- 155 (232)
+|+++||||... ..+.+.....+|..+...+.+...+.. ......++++.........................
T Consensus 63 id~lv~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~ 140 (257)
T d1fjha_ 63 MDGLVLCAGLGP--QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp CSEEEECCCCCT--TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred CcEEEEcCCCCC--cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence 799999998532 345567888899999988887766542 33455555554332211110000000000000000
Q ss_pred ---hh--ccccchhHHHHHHHHHHHHHHHHHh---cCCcEEEEccCceeCCCCCC
Q 026852 156 ---VL--CKENKEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP 202 (232)
Q Consensus 156 ---~~--~~~~~~~y~~sK~~~~~~~~~~~~~---~~i~~~~v~pg~v~g~~~~~ 202 (232)
.. .......|+.||++.+.+++.++.+ +|||||+|+||+|.||+.+.
T Consensus 141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~ 195 (257)
T d1fjha_ 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA 195 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------
T ss_pred eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHh
Confidence 00 0001134999999999999888876 58999999999999998654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.81 E-value=1.6e-20 Score=152.54 Aligned_cols=189 Identities=13% Similarity=0.150 Sum_probs=125.9
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
.++||||||||+||++++++|+++|++|++++|++........+... ....+++++++|++|.+.+.+++.+++.++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 35699999999999999999999999999999987654332221111 11356899999999999999999999999999
Q ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhHH
Q 026852 87 ASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWYS 166 (232)
Q Consensus 87 Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y~ 166 (232)
++.... ..|..++.++++++.+. ...++++.||.+.. +.... .+ ......|.
T Consensus 83 ~~~~~~----------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~-~~~~~-------------~~---~~~~~~~~ 134 (312)
T d1qyda_ 83 LAGGVL----------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMD-PDIME-------------HA---LQPGSITF 134 (312)
T ss_dssp CCCSSS----------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSC-TTSCC-------------CC---CSSTTHHH
T ss_pred hhhccc----------ccchhhhhHHHHHHHHh-cCCcEEEEeecccc-CCCcc-------------cc---cchhhhhh
Confidence 864321 23445567778887776 45667777776332 11110 00 01112255
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 167 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 167 ~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
..|...++ +....+++++++||+.++++.......... .....++ +++++.+.++|+|
T Consensus 135 ~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~ 195 (312)
T d1qyda_ 135 IDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVD 195 (312)
T ss_dssp HHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEEC
T ss_pred HHHHHHHH----hhcccccceEEeccceeecCCccchhhHHH---Hhhhcccccccccccccccceee
Confidence 55555444 445679999999999999875433221110 0011122 7888888898886
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.81 E-value=1.1e-19 Score=146.66 Aligned_cols=154 Identities=16% Similarity=0.064 Sum_probs=112.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 86 (232)
|+||||||+|+||++++++|.+.|+.| .++++... +++|++|.+.++++++ ++|+|||+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~ 61 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------FCGDFSNPKGVAETVRKLRPDVIVNA 61 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence 479999999999999999999888644 45444321 2378999999999987 56999999
Q ss_pred ccccc-cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 87 ASPVI-FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 87 Ag~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
||... ......+...+++|+.++.++++++... + .+++++||...+++ .. +.+.+|.....| .+.|
T Consensus 62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~-~~----~~~~~E~~~~~p------~~~y 128 (298)
T d1n2sa_ 62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPG-TG----DIPWQETDATSP------LNVY 128 (298)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCC-CT----TCCBCTTSCCCC------SSHH
T ss_pred cccccccccccCccccccccccccccchhhhhcc-c-cccccccccccccC-CC----CCCCccccccCC------CchH
Confidence 98643 2446677889999999999999998776 3 57888888754432 22 344556554443 3669
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 198 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~ 198 (232)
+.+|..+|.+... ......+++++....+
T Consensus 129 ~~~k~~~e~~~~~----~~~~~~~~~~~~~~~~ 157 (298)
T d1n2sa_ 129 GKTKLAGEKALQD----NCPKHLIFRTSWVYAG 157 (298)
T ss_dssp HHHHHHHHHHHHH----HCSSEEEEEECSEECS
T ss_pred hhhhhhhhhhHHh----hhcccccccccceeec
Confidence 9999999987743 3445566666655543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=2.7e-19 Score=138.40 Aligned_cols=149 Identities=20% Similarity=0.234 Sum_probs=108.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-cCCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-DGCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vi~ 85 (232)
|+||||||||+||++++++|+++|+ +|+...|++... ..++ ..+..|..++...+ ..+|.|||
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------~~~~---~~~~~d~~~~~~~~~~~~d~vi~ 68 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPRL---DNPVGPLAELLPQLDGSIDTAFC 68 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTTE---ECCBSCHHHHGGGCCSCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------cccc---cccccchhhhhhccccchheeee
Confidence 8999999999999999999999998 566666655321 1122 23334444444443 45799999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
++|..... ........+.|+.++.++++++.+. +.++++++||.++. +.. ...|
T Consensus 69 ~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~-~~~-----------------------~~~y 122 (212)
T d2a35a1 69 CLGTTIKE-AGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGAD-AKS-----------------------SIFY 122 (212)
T ss_dssp CCCCCHHH-HSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCC-TTC-----------------------SSHH
T ss_pred eeeeeccc-cccccccccchhhhhhhcccccccc-cccccccccccccc-ccc-----------------------ccch
Confidence 99854221 2234678899999999999999886 88999999998543 211 1349
Q ss_pred HHHHHHHHHHHHHHHHhcCC-cEEEEccCceeCCCCC
Q 026852 166 SLAKTLAEEAAWKFAKENGI-DLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i-~~~~v~pg~v~g~~~~ 201 (232)
..+|..+|+.+. +.+. +++++||+.|+||...
T Consensus 123 ~~~K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~ 155 (212)
T d2a35a1 123 NRVKGELEQALQ----EQGWPQLTIARPSLLFGPREE 155 (212)
T ss_dssp HHHHHHHHHHHT----TSCCSEEEEEECCSEESTTSC
T ss_pred hHHHHHHhhhcc----ccccccceeeCCcceeCCccc
Confidence 999999988763 4566 5899999999998754
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=1.8e-19 Score=140.88 Aligned_cols=164 Identities=20% Similarity=0.209 Sum_probs=117.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCe--EEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYT--VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.++||||||+|+||+++++.|+++|++ |+.+.|++++ ...+ ..+++++++|+++.+.+.++++++|+|||
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~-----~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 74 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----KEKI---GGEADVFIGDITDADSINPAFQGIDALVI 74 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH-----HHHT---TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH-----HHhc---cCCcEEEEeeeccccccccccccceeeEE
Confidence 478999999999999999999999976 5556676632 2222 24678999999999999999999999999
Q ss_pred ccccccc--------------CCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCC
Q 026852 86 TASPVIF--------------LSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETW 151 (232)
Q Consensus 86 ~Ag~~~~--------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~ 151 (232)
+|+.... .....+.....+|+.++.++++.+... ..++..+.|+.....+...
T Consensus 75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~------------ 141 (252)
T d2q46a1 75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDHP------------ 141 (252)
T ss_dssp CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTCG------------
T ss_pred EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccccccccccccCCCCcc------------
Confidence 9974211 112344566788999999999988777 6678888887744322111
Q ss_pred CCChhhccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCC
Q 026852 152 FSNPVLCKENKEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 201 (232)
Q Consensus 152 ~~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~ 201 (232)
. .......|...+.+.+. +..+.+++++++|||+++||...
T Consensus 142 ----~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~ilRp~~v~g~~~~ 182 (252)
T d2q46a1 142 ----L-NKLGNGNILVWKRKAEQ----YLADSGTPYTIIRAGGLLDKEGG 182 (252)
T ss_dssp ----G-GGGGGCCHHHHHHHHHH----HHHHSSSCEEEEEECEEECSCTT
T ss_pred ----c-ccccccchhhhhhhhhh----hhhcccccceeecceEEECCCcc
Confidence 0 01111225555555444 34568999999999999998744
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.76 E-value=7e-19 Score=141.80 Aligned_cols=181 Identities=16% Similarity=0.243 Sum_probs=121.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch-h---hhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-E---HLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~-~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.|+||||||||+||++++++|+++|++|++++|++..... . .+..+. ...+.++++|+.+.+.+...+++++.+
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhhhceee
Confidence 3789999999999999999999999999999998765432 1 112222 346789999999999999999999999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccch
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKE 163 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 163 (232)
+|+++.. +..++.++++++... +.+++++.||......... ...+ ..
T Consensus 81 i~~~~~~--------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~------------~~~~------~~ 127 (307)
T d1qyca_ 81 ISTVGSL--------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVH------------AVEP------AK 127 (307)
T ss_dssp EECCCGG--------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCC------------CCTT------HH
T ss_pred eeccccc--------------ccchhhHHHHHHHHh-ccccceeeecccccccccc------------cccc------cc
Confidence 9998643 222345566777776 6678888887633211110 0000 11
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCCCCCCCcchHHHHHHHHcCC---CCCCccceeeeec
Q 026852 164 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGN---IYSAAIQDRIMIY 231 (232)
Q Consensus 164 ~y~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (232)
.+...+...+. +..+.+++++++||++++|+....... .......+. .++.+.+.++|+|
T Consensus 128 ~~~~~~~~~~~----~~~~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (307)
T d1qyca_ 128 SVFEVKAKVRR----AIEAEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAPPRDKVVILGDGNARVVFVK 190 (307)
T ss_dssp HHHHHHHHHHH----HHHHHTCCBEEEECCEEHHHHTTTTTC----TTCSSCCSSEEEEETTSCCEEEEEC
T ss_pred ccccccccccc----hhhccCCCceecccceecCCCccchhh----hhhhhhhcccceeeecccccccCCc
Confidence 23333433333 334679999999999999986543221 111222233 6777888888886
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.70 E-value=7.7e-20 Score=139.54 Aligned_cols=110 Identities=17% Similarity=0.164 Sum_probs=86.4
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++++|+++||||+||||+++++.|+++|++|++++|++++... ..+++.. ..++.+..+|+++.+++.++++++|+|
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~iDil 96 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA-AADSVNK-RFKVNVTAAETADDASRAEAVKGAHFV 96 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHH-HHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHH-HHHHHHh-ccchhhhhhhcccHHHHHHHhcCcCee
Confidence 46899999999999999999999999999999999999865432 2222221 234567889999999999999999999
Q ss_pred EEccccc-ccCCCCchhhhhHHHHHHHHHHHHH
Q 026852 84 FHTASPV-IFLSDNPQADIVDPAVMGTLNVLRS 115 (232)
Q Consensus 84 i~~Ag~~-~~~~~~~~~~~~~~n~~~~~~l~~~ 115 (232)
|||||.. ...+.+.|+..+++|+.+..+.+..
T Consensus 97 in~Ag~g~~~~~~e~~~~~~~~nv~~~~~~~~~ 129 (191)
T d1luaa1 97 FTAGAIGLELLPQAAWQNESSIEIVADYNAQPP 129 (191)
T ss_dssp EECCCTTCCCBCHHHHHTCTTCCEEEECCCSSS
T ss_pred eecCccccccCCHHHHHhhhcceeehhHhhHHH
Confidence 9999852 3355667777777777766655433
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.68 E-value=8.1e-16 Score=127.13 Aligned_cols=153 Identities=18% Similarity=0.204 Sum_probs=110.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch-HHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~ 85 (232)
+.|+|+||||||+||++++++|+++|++|+++.|++++.....+. . ..+++++++|+.|.++ +..+++++|.+++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~---~-~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~ 77 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---A-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 77 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---T-STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhc---c-cCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence 358999999999999999999999999999999998764322221 1 3468999999998655 6778899999887
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccceeccCCCCCCCccccccCCCCChhhccccchhH
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIGAMLLNETPMTPDVVIDETWFSNPVLCKENKEWY 165 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~y 165 (232)
+.... ...++..+.++++++.+. +.+++++.||.......... ....|
T Consensus 78 ~~~~~-----------~~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~~~--------------------~~~~~ 125 (350)
T d1xgka_ 78 NTTSQ-----------AGDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYGPW--------------------PAVPM 125 (350)
T ss_dssp CCCST-----------TSCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTSSC--------------------CCCTT
T ss_pred ecccc-----------cchhhhhhhHHHHHHHHh-CCCceEEEeeccccccCCcc--------------------cchhh
Confidence 75321 123667788899999888 77788888887443222110 01224
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEccCceeCCC
Q 026852 166 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 199 (232)
Q Consensus 166 ~~sK~~~~~~~~~~~~~~~i~~~~v~pg~v~g~~ 199 (232)
..+|...+.+. ...++++..+||+.+++..
T Consensus 126 ~~~k~~~~~~~----~~~~~~~~~vr~~~~~~~~ 155 (350)
T d1xgka_ 126 WAPKFTVENYV----RQLGLPSTFVYAGIYNNNF 155 (350)
T ss_dssp THHHHHHHHHH----HTSSSCEEEEEECEEGGGC
T ss_pred hhhHHHHHHHH----HhhccCceeeeeceeeccc
Confidence 56676666654 3568999999999876643
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.55 E-value=6.3e-07 Score=63.64 Aligned_cols=116 Identities=19% Similarity=0.154 Sum_probs=80.9
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
||.|.||+|.+|++++..|...|. ++++++.++.+. +.++ +.. ...+..... .....+..+.++++|+||..|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~--~a~D-l~~-~~~~~~~~~-~~~~~~~~~~~~~aDivVita 76 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG--VAAD-LSH-IETRATVKG-YLGPEQLPDCLKGCDVVVIPA 76 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH--HHHH-HTT-SSSSCEEEE-EESGGGHHHHHTTCSEEEECC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch--hhHH-Hhh-hhhhcCCCe-EEcCCChHHHhCCCCEEEECC
Confidence 699999999999999999998875 688888875422 2222 221 111111111 223566678889999999999
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|... .+.+...+.++.|......+++.+.++.....++.+|..
T Consensus 77 g~~~-~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNP 119 (144)
T d1mlda1 77 GVPR-KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (144)
T ss_dssp SCCC-CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred CcCC-CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 8532 233455678999999999999999998555666666665
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.46 E-value=3.9e-07 Score=66.64 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=58.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.|+|+|.|| |++|+.++++|.++|++|++.+|+.++ .+++............+..+.......+...|.++...
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~-----a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~ 75 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLES-----AKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI 75 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHH-----HHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHH-----HHHHHhcccccccccccccchhhhHhhhhccceeEeec
Confidence 489999987 999999999999999999999999853 33344334455666677777778888888888888654
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.45 E-value=8.7e-07 Score=63.06 Aligned_cols=116 Identities=15% Similarity=0.108 Sum_probs=73.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhh--hcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRE--LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.+.+||.|.|+ |.+|+.++..|+.+| .+|+++|+++++...+.++. .............| + +.++++|
T Consensus 3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~----~~~~~ad 74 (146)
T d1ez4a1 3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---Y----SDCKDAD 74 (146)
T ss_dssp TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---G----GGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---H----HHhcccc
Confidence 45679999996 999999999999987 58999999875433222211 11112223344444 3 2457899
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS 130 (232)
+||.+||.-.. +.+...+.++.|+.....+.+.+.++....-++++|-
T Consensus 75 ivvitag~~~~-~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvtN 122 (146)
T d1ez4a1 75 LVVITAGAPQK-PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (146)
T ss_dssp EEEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEEecccccC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCC
Confidence 99999985322 2344567788999999999999888844444555443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.43 E-value=2.1e-06 Score=61.15 Aligned_cols=116 Identities=16% Similarity=0.144 Sum_probs=79.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhh---hcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRE---LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.++||-|.|| |.+|.+++..|+..|. +++++|+++++...+.++. .............|. +.++++|
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD 76 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD 76 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence 4578999997 9999999999999875 7999999876533222221 111122333333332 4567899
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||..||.... ..+...+.+..|..-...+.+.+.++.....++++|-.
T Consensus 77 vvvitag~~~~-~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNP 125 (148)
T d1ldna1 77 LVVICAGANQK-PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNP 125 (148)
T ss_dssp EEEECCSCCCC-TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred eEEEecccccc-cCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCc
Confidence 99999985322 23444677889999999999998888555666666554
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.37 E-value=1.1e-05 Score=57.13 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=76.6
Q ss_pred cEEEEECCCChhHHHHHHHHHH-CC--CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQ-RG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+||.|+|++|.+|++++..|.. .+ .++.+.+..+. ...+..+ +........... +...+.. +.++++|+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~D-l~h~~~~~~~~~--~~~~~~~-~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVD-LSHIPTAVKIKG--FSGEDAT-PALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHH-HHTSCSSCEEEE--ECSSCCH-HHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHH-HHCCccccCCcE--EEcCCCc-cccCCCCEEEE
Confidence 4799999999999999988764 33 68999987642 2222222 221111111111 1222222 46778999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+||... .+.+...+.++.|......+.+.+.++.....++.+|..
T Consensus 76 taG~~~-k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNP 120 (145)
T d2cmda1 76 SAGVRR-KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (145)
T ss_dssp CCSCCC-CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred CCCccC-CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCC
Confidence 998532 234456688999999999999999998555666676665
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.37 E-value=4.7e-07 Score=63.30 Aligned_cols=71 Identities=14% Similarity=0.175 Sum_probs=57.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
|+|+|.|+ |.+|+.+++.|.+.|++|++++++++.. +.+... .....+.+|.++++.++++ ++++|.++-.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~-----~~~~~~-~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-----KKASAE-IDALVINGDCTKIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHH-CSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhh-----hhhhhh-hhhhhccCcccchhhhhhcChhhhhhhccc
Confidence 57999998 9999999999999999999999988533 222211 1457889999999999988 6788988854
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.36 E-value=5.2e-06 Score=58.81 Aligned_cols=114 Identities=18% Similarity=0.131 Sum_probs=75.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchh--hh---hhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTE--HL---RELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~--~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
+||.|.||+|.+|..++..|+.++ .++.+++++++....+ .. +.......+.+....--.+. +.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence 479999999999999999999998 4899999886421111 11 11111122222211111122 4667899
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEe
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLT 128 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~v 128 (232)
+||-+||... .+.+...+.++.|......+.+...++. .+.++.+
T Consensus 77 vVVitAG~~~-~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivV 121 (145)
T d1hyea1 77 VVIITSGVPR-KEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI 121 (145)
T ss_dssp EEEECCSCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred EEEEeccccc-CCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence 9999998532 2334567889999999999999998884 4555544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.23 E-value=2.3e-06 Score=61.36 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=78.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhh---hcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRE---LDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
.+-+.+||.|.|+ |.+|..++..|...+. ++++++.+++.......+. ......+... ......++++++
T Consensus 3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-----~~~~~~~~~~~~ 76 (154)
T d1pzga1 3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-----RAEYSYEAALTG 76 (154)
T ss_dssp CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-----EEECSHHHHHTT
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEE-----eccCchhhhhcC
Confidence 4446689999998 9999999988888774 8999998886443222211 1000111111 112233567789
Q ss_pred CCEEEEcccccccC----CCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 80 CDGVFHTASPVIFL----SDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+|+||-.||..... ....-.+.++.|......+++.+.++....-++.+|..
T Consensus 77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivsNP 132 (154)
T d1pzga1 77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNP 132 (154)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence 99999999853211 11244677889999999999999888544555555544
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=98.22 E-value=1.6e-05 Score=55.99 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=73.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+||.|.|+ |.+|..++..++..+. +++++|+++++...+.++... ........... ++ +.++++|+|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence 46788897 9999999999999875 799999998765444433221 11122332222 22 4567899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-.||.... ..+...+.++.|..-...+++.+.++.....++.+|-.
T Consensus 74 itag~~~~-~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtNP 119 (142)
T d1y6ja1 74 VTAGANRK-PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNP 119 (142)
T ss_dssp ECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred EecccccC-cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecCh
Confidence 99985422 23455678899999999999999888544555555544
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=98.19 E-value=8.7e-06 Score=57.68 Aligned_cols=115 Identities=11% Similarity=0.033 Sum_probs=72.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhh---hcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRE---LDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|||.|.|+ |.+|+.++..|+.+|. +++++++++++...+.++. .............| + +.++++|+|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence 78999995 9999999999998874 7999998876433222221 11112222333333 3 345789999
Q ss_pred EEcccccc---cCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVI---FLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|-.||... ..+.....+.++.|......+.+.+.++....-++.+|-.
T Consensus 74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNP 124 (146)
T d1hyha1 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNP 124 (146)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 99998432 1122234566888999999999888887444455555544
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.15 E-value=2.4e-06 Score=62.96 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=52.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
+|.+|||+||+|++|...++.....|++|++++|++++. +.+++. .....+..-|-...+.+.+... ++|+|+
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~--~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~ 103 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI--AYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCYF 103 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH--HHHHhh---hhhhhcccccccHHHHHHHHhhcCCCceeE
Confidence 578999999999999999999999999999999887532 223322 2222232233333334444433 589999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
++.|
T Consensus 104 D~vG 107 (182)
T d1v3va2 104 DNVG 107 (182)
T ss_dssp ESSC
T ss_pred EecC
Confidence 9875
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.14 E-value=3.3e-07 Score=67.81 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=33.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
|+|.|+||+|+||+++++.|+++|++|++.+|++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~ 37 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA 37 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4688889999999999999999999999999998654
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=98.13 E-value=2.1e-05 Score=55.42 Aligned_cols=115 Identities=14% Similarity=0.012 Sum_probs=75.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+||.|+|| |.+|++++..|+..+ .++.++|+++++.....++... ....+..+... .++ +.++++|++
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence 46888896 999999999999987 4899999998754432222111 00112223221 222 446789999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+-.||... .+.+.-.+.++.|..-...+.+.+.++....-++++|-.
T Consensus 74 vitag~~~-~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNP 120 (142)
T d1guza1 74 IITAGLPR-KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 (142)
T ss_dssp EECCSCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSS
T ss_pred EEEEecCC-CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEecCC
Confidence 99998532 223345677889999999999998888544445554443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.12 E-value=9.2e-06 Score=58.12 Aligned_cols=118 Identities=18% Similarity=0.093 Sum_probs=72.3
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC----e-EEEEEcCCCCcch--hhh-hhhc-CCCCceEEEEcCCCCcchHHHhhc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY----T-VKATVRDPNSPKT--EHL-RELD-GATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~----~-V~~~~r~~~~~~~--~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
.++|.|+||+|++|++++..|++.+. + +....-....... +.. .++. ......+.+.. .....+.++
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 79 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVAFK 79 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc----CCchhhhcc
Confidence 35899999999999999999998752 1 2111111111111 111 1111 11122222222 234457888
Q ss_pred CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCc-cEEEEecc
Q 026852 79 GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSI-KRVVLTSS 130 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~vSS 130 (232)
++|+||-.||... .+.+..++.++.|+.....+.+.+.++.+. ..++.+|.
T Consensus 80 ~advViitaG~~~-~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN 131 (154)
T d1y7ta1 80 DADYALLVGAAPR-KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN 131 (154)
T ss_dssp TCSEEEECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cccEEEeecCcCC-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence 9999999998643 234556788899999999999999887433 45555554
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=3.7e-06 Score=61.94 Aligned_cols=82 Identities=13% Similarity=0.125 Sum_probs=62.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
.+++|+|+|.|+ ||.|++++..|++.|. +++++.|+++..+. ...+.+.. .........|+.+.+++...+..+|
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d 92 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALASAD 92 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhcccc
Confidence 468899999999 6899999999999987 68889999876542 11222222 1223455688889999988889999
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
+|||+..
T Consensus 93 iiIN~Tp 99 (182)
T d1vi2a1 93 ILTNGTK 99 (182)
T ss_dssp EEEECSS
T ss_pred eeccccC
Confidence 9999874
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=98.08 E-value=4.9e-05 Score=54.44 Aligned_cols=117 Identities=13% Similarity=0.003 Sum_probs=79.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
++.+||-|.|+ |.+|..++..|+..|. +++++|++++....++++... ........... ++ +.++++
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~---d~----~~~~~a 89 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADK---DY----SVTANS 89 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECS---SG----GGGTTC
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEecc---ch----hhcccc
Confidence 45678999996 9999999999999985 799999987544323322111 11112211122 22 346789
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|+||..||.... ..+...+.++.|......+++...+....+-++++|-.
T Consensus 90 diVVitAg~~~~-~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNP 139 (160)
T d1i0za1 90 KIVVVTAGVRQQ-EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139 (160)
T ss_dssp SEEEECCSCCCC-TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred cEEEEecCCccc-cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence 999999995432 23455678899999999999998888544556666655
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.08 E-value=1.7e-05 Score=55.68 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=74.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCCCcchhhhhhhc--CCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+||-|.|+ |.+|+.++..++.++ .++.++|+++++...+.++... ....+......| . +.++++|+||
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence 46888897 899999999888887 4799999887544322222111 112233333322 2 3467899999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-+||.... ..+.-.+.+..|..-...+++...++.....++++|-.
T Consensus 73 itag~~~~-~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNP 118 (140)
T d1a5za1 73 VAAGVPQK-PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP 118 (140)
T ss_dssp ECCCCCCC-SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EecccccC-CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCc
Confidence 99985322 23444677888999999999999888544555554433
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.07 E-value=7.9e-06 Score=56.82 Aligned_cols=71 Identities=24% Similarity=0.193 Sum_probs=55.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
|+++|.|+ |-+|+++++.|.+.|++|++++.+++ ..+++... ....+.+|.++++.+.++ ++++|.+|-..
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~-----~~~~~~~~--~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~ 72 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEE-----KVNAYASY--ATHAVIANATEENELLSLGIRNFEYVIVAI 72 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHH-----HHHHTTTT--CSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHH-----HHHHHHHh--CCcceeeecccchhhhccCCccccEEEEEc
Confidence 45777777 78999999999999999999999874 34444332 235667999999999888 78899887553
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=98.05 E-value=9.2e-06 Score=59.33 Aligned_cols=117 Identities=14% Similarity=0.043 Sum_probs=73.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC---C--eEEE--EEcCCCCcchhhh-hhhcC-CCCceEEEEcCCCCcchHHHhhcC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG---Y--TVKA--TVRDPNSPKTEHL-RELDG-ATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g---~--~V~~--~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
.+|.||||+|.||++++..|++.+ . .+.+ ++........+.+ .++.. ......-+ .-.....+.+++
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~----~~~~~~~~~~~~ 100 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV----SIGIDPYEVFED 100 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE----EEESCHHHHTTT
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCc----cccccchhhccC
Confidence 479999999999999999999853 2 2333 3433321111111 11111 11112111 112345578899
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCC-ccEEEEecc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHS-IKRVVLTSS 130 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~vSS 130 (232)
+|+||-.||.. ..+.+...+.++.|......+.+++.++.+ ..+++.+|-
T Consensus 101 aDvVvi~ag~~-rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~N 151 (175)
T d7mdha1 101 VDWALLIGAKP-RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 151 (175)
T ss_dssp CSEEEECCCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CceEEEeeccC-CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 99999999853 234566678899999999999999988743 345555554
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=98.00 E-value=6.7e-05 Score=52.63 Aligned_cols=114 Identities=15% Similarity=0.000 Sum_probs=76.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcc--hhhhhhh--cCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPK--TEHLREL--DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
||-|.||+|.+|.+++..++.++. ++.+++++..+.. .+.++.. .....+......| ++ .++++|+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~----~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE----DTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG----GGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH----HhhhcCEE
Confidence 689999999999999999999975 6888886432211 1122111 0112333433333 33 34689999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+-.||... .+.+...+.++.|..-...+.+...++.....++.+|..
T Consensus 75 vitaG~~~-~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtNP 121 (142)
T d1o6za1 75 VITAGIPR-QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (142)
T ss_dssp EECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred EEeccccc-ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecCh
Confidence 99998532 234566788999999999999999888555556666544
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.00 E-value=4e-06 Score=60.41 Aligned_cols=72 Identities=24% Similarity=0.239 Sum_probs=54.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.+++++|+|.|+ |.+|..+++.|...|+ +++++.|+.++.. +...++. . ...+.+++.+.+.++|+|
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~-~l~~~~~-----~-----~~~~~~~~~~~l~~~Div 88 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDLG-----G-----EAVRFDELVDHLARSDVV 88 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHHT-----C-----EECCGGGHHHHHHTCSEE
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHH-HHHHhhh-----c-----ccccchhHHHHhccCCEE
Confidence 578899999998 9999999999999998 6888888865432 1222221 1 123567888899999999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.+.+
T Consensus 89 i~ats 93 (159)
T d1gpja2 89 VSATA 93 (159)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 99875
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.99 E-value=3.5e-06 Score=52.87 Aligned_cols=39 Identities=38% Similarity=0.427 Sum_probs=35.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
++.++||+||+|++|...++.+...|++|+++.+++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 567899999999999999999899999999999988653
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.98 E-value=1.3e-05 Score=58.51 Aligned_cols=102 Identities=17% Similarity=0.098 Sum_probs=62.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
|+|.|.|| |-+|..++..|.++|++|.+.+|+++..+. +.... .................+..++++++|+||.
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii 78 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKE--IQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 78 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH--HHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH--HHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence 78999999 889999999999999999999998753321 11110 0011112222222223456788889999997
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecc
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSS 130 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS 130 (232)
+... . ....+++.+.++...+.+|.+++
T Consensus 79 ~v~~------~-----------~~~~~~~~i~~~l~~~~~iv~~~ 106 (184)
T d1bg6a2 79 VVPA------I-----------HHASIAANIASYISEGQLIILNP 106 (184)
T ss_dssp CSCG------G-----------GHHHHHHHHGGGCCTTCEEEESS
T ss_pred EEch------h-----------HHHHHHHHhhhccCCCCEEEEeC
Confidence 6411 1 12345566667655555655443
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.98 E-value=6.1e-06 Score=60.09 Aligned_cols=75 Identities=20% Similarity=0.137 Sum_probs=52.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
-++.+|+|+||+|++|...++.+...|++|+++++++++. +.++++.. . +.+ |..+.......-+++|+||.
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~--~~~~~lGa---~-~~i--~~~~~~~~~~~~~g~D~v~d 97 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL--ALPLALGA---E-EAA--TYAEVPERAKAWGGLDLVLE 97 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS--HHHHHTTC---S-EEE--EGGGHHHHHHHTTSEEEEEE
T ss_pred CCCCEEEEEeccccchhhhhhhhccccccccccccccccc--cccccccc---c-eee--ehhhhhhhhhcccccccccc
Confidence 4678999999999999999999999999999999887543 33333321 1 121 33333222233457899999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+.|
T Consensus 98 ~~G 100 (171)
T d1iz0a2 98 VRG 100 (171)
T ss_dssp CSC
T ss_pred ccc
Confidence 765
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.97 E-value=2.9e-05 Score=55.67 Aligned_cols=117 Identities=14% Similarity=0.096 Sum_probs=76.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhh---cCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLREL---DGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
++..||.|.|+ |.+|..++..|+..|. +++++|+++++...+.++-. ............| + +.++++
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~----~~~~~a 88 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---Y----NVSANS 88 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---G----GGGTTE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---h----hhhccc
Confidence 44567999996 9999999999999875 79999988754332222211 1111222222223 2 345678
Q ss_pred CEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 81 DGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 81 d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|+||..||... .+.+...+.++.|......+.+.+.+....+.++.+|..
T Consensus 89 divvitag~~~-~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtNP 138 (159)
T d2ldxa1 89 KLVIITAGARM-VSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138 (159)
T ss_dssp EEEEECCSCCC-CTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSSS
T ss_pred cEEEEeccccc-CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCCc
Confidence 99999998532 223444567888999988888887777555566666655
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.96 E-value=7.9e-06 Score=59.81 Aligned_cols=75 Identities=27% Similarity=0.333 Sum_probs=49.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh--cCCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--DGCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi 84 (232)
++.+|||+||+||+|...++.+...|++|+++.+++++. +.+.++.. . +.+..+-.+ ++..... +++|+||
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~--~~~~~lGa---~-~vi~~~~~~-~~~~~~~~~~gvD~vi 103 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH--DYLRVLGA---K-EVLAREDVM-AERIRPLDKQRWAAAV 103 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH--HHHHHTTC---S-EEEECC----------CCSCCEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH--HHHHhccc---c-eeeecchhH-HHHHHHhhccCcCEEE
Confidence 467899999999999999999999999999999998764 33443322 1 222222111 2222222 2679999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.+.|
T Consensus 104 d~vg 107 (176)
T d1xa0a2 104 DPVG 107 (176)
T ss_dssp ECST
T ss_pred EcCC
Confidence 9876
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.95 E-value=9.3e-05 Score=51.97 Aligned_cols=114 Identities=19% Similarity=0.127 Sum_probs=74.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhhh--cCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLREL--DGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
||.|.|+ |.+|.+++..++.+|. +++++++++++..-+.++.. ............ .+. +.++++|+||-
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~----~~~~daDvVVi 75 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMVVI 75 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEEEE
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCH----HHhhCCcEEEE
Confidence 6888897 9999999999999985 79999988754332222111 111112222211 122 34667999999
Q ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 86 TASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 86 ~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
.||... .+.+...+.+..|..-...+++.+.++.....++.+|-.
T Consensus 76 taG~~~-~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvtNP 120 (143)
T d1llda1 76 TAGPRQ-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 120 (143)
T ss_dssp CCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred eccccc-CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 998542 233455678899999999999998888444555555543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=8.8e-06 Score=59.28 Aligned_cols=74 Identities=20% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH---hhc--CCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD--GCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~--~~d 81 (232)
++.+|||+||+|++|...++.+...|++|+++++++++. +.+.++.. . +. .|.++.+-.++ ... ++|
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~--~~~~~~Ga--~--~v--i~~~~~~~~~~i~~~t~~~g~d 99 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ--KIVLQNGA--H--EV--FNHREVNYIDKIKKYVGEKGID 99 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTTC--S--EE--EETTSTTHHHHHHHHHCTTCEE
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccc--ccccccCc--c--cc--cccccccHHHHhhhhhccCCce
Confidence 678999999999999999999999999999999876432 22333221 1 22 25555443333 322 479
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|.+.|
T Consensus 100 ~v~d~~g 106 (174)
T d1yb5a2 100 IIIEMLA 106 (174)
T ss_dssp EEEESCH
T ss_pred EEeeccc
Confidence 9998875
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.94 E-value=1.2e-05 Score=57.49 Aligned_cols=118 Identities=17% Similarity=0.016 Sum_probs=70.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCC-----C--eEEEEEcCCCCcchhhhhh-h-cCCCCceEEEEcCCCCcchHHHhhc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRG-----Y--TVKATVRDPNSPKTEHLRE-L-DGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g-----~--~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
.++|.|+||+|.+|++++..|++.+ . ++++.+.++.....+.+.. + .........+ .. .....+.++
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~--~~--~~~~~~~~~ 78 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDV--IA--TDKEEIAFK 78 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE--EE--ESCHHHHTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccc--cc--CcccccccC
Confidence 3689999999999999999998754 2 2344444332221111111 1 1111112211 11 223447788
Q ss_pred CCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCcc-EEEEecc
Q 026852 79 GCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIK-RVVLTSS 130 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~vSS 130 (232)
++|+||-.||.... ..+..++.++.|..-...+.+...++.+.. .++.+|.
T Consensus 79 ~~dvVVitag~~~~-~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsN 130 (154)
T d5mdha1 79 DLDVAILVGSMPRR-DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (154)
T ss_dssp TCSEEEECCSCCCC-TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CceEEEEecccCCC-CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecC
Confidence 99999999984322 233445678999999999999888874433 4445553
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.93 E-value=8e-06 Score=59.86 Aligned_cols=74 Identities=18% Similarity=0.091 Sum_probs=50.7
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhh--cCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAV--DGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~~d 81 (232)
++.+|||+||+|++|...++.+...|++|+++++++++. +.+.+. +.. +.+ |..+.+ ++.+.. +++|
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~--~~l~~~---Ga~-~vi--~~~~~~~~~~v~~~t~~~g~d 96 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR--EMLSRL---GVE-YVG--DSRSVDFADEILELTDGYGVD 96 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHTT---CCS-EEE--ETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccc--cccccc---ccc-ccc--cCCccCHHHHHHHHhCCCCEE
Confidence 568999999999999999999989999999999876432 223322 222 222 334433 333333 3589
Q ss_pred EEEEccc
Q 026852 82 GVFHTAS 88 (232)
Q Consensus 82 ~vi~~Ag 88 (232)
++|.+.|
T Consensus 97 ~v~d~~g 103 (183)
T d1pqwa_ 97 VVLNSLA 103 (183)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 9999875
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.89 E-value=9.3e-05 Score=51.92 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=74.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCCCcchhhhhh---hcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRE---LDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
|||.|.|+ |.+|.+++..|+.+|. +++++|+++++...+.++. ............. .|+ +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCH----HHhccccEE
Confidence 47888896 9999999999998874 6999998875433222221 1111111222211 122 466789999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|-.||... .+.+...+.+..|......+.+.+.++.....++.+|-.
T Consensus 74 vitag~~~-~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtNP 120 (142)
T d1ojua1 74 VVTAGLAR-KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (142)
T ss_dssp EECCCCCC-CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred EEeccccC-CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecCC
Confidence 99998432 234456788889999999999998888444455555544
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.85 E-value=3.6e-05 Score=58.33 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=52.7
Q ss_pred CCCCcEEEEECC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC
Q 026852 5 EGEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68 (232)
Q Consensus 5 ~~~~~~ilItGa----------------~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (232)
.|+|++||||+| ||.+|.++++++.++|++|+++.-...... ...+..+.. .
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----------p~~~~~~~~--~ 70 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----------PPFVKRVDV--M 70 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----------CTTEEEEEC--C
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc----------cccccccee--h
Confidence 478999999986 799999999999999999999876553211 123444332 3
Q ss_pred Ccch----HHHhhcCCCEEEEcccc
Q 026852 69 EEGS----FDSAVDGCDGVFHTASP 89 (232)
Q Consensus 69 ~~~~----~~~~~~~~d~vi~~Ag~ 89 (232)
..++ +.+.++++|++|++|++
T Consensus 71 t~~~m~~~~~~~~~~~D~~i~aAAv 95 (223)
T d1u7za_ 71 TALEMEAAVNASVQQQNIFIGCAAV 95 (223)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBC
T ss_pred hhHHHHHHHHhhhccceeEeeeech
Confidence 3333 34445689999999985
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.83 E-value=6.8e-06 Score=59.64 Aligned_cols=45 Identities=38% Similarity=0.539 Sum_probs=37.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL 53 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 53 (232)
++..|||+||+|++|...++.....|++|+++++++++. +.+.++
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~--~~~~~l 67 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA--DYLKQL 67 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH--HHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH--HHHHhh
Confidence 345799999999999999999989999999999998764 334444
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.82 E-value=0.00018 Score=50.81 Aligned_cols=116 Identities=15% Similarity=0.100 Sum_probs=73.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhc---CCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.||-|.|+ |.+|.+++..|+..+ .++.++|++++.....+++... ....+......+ ++ +.++++|+||
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advvv 76 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVVI 76 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEEE
Confidence 57889996 999999998777776 3788999988654322222111 001122222211 12 4557899999
Q ss_pred Ecccccc--cC--CCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVI--FL--SDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~--~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-.||... .. ....-.+.++.|......+.+.+.++.....++++|-.
T Consensus 77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvtNP 127 (150)
T d1t2da1 77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNP 127 (150)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 9998421 11 12234677899999999999999888544555555554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.76 E-value=0.00011 Score=51.54 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=69.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcC---CCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
|||-|.|+ |.+|.+++..|+..+. ++++++.+++....+..+.... ......+... .|+ +.++++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~----~~~~~advvv 74 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY----ADTANSDVIV 74 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcH----HHhcCCCEEE
Confidence 57888896 9999999998888774 8999998886543322221100 0111111111 122 3356799999
Q ss_pred EcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 85 HTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 85 ~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
-+||.... +.+...+.++.|..-...+++...++.....++.+|-.
T Consensus 75 itag~~~~-~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvtNP 120 (142)
T d1uxja1 75 VTSGAPRK-PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 120 (142)
T ss_dssp ECCSCC----------CHHHHHHHHHHHHHHHGGGCTTCEEEECSSS
T ss_pred EeeeccCC-cCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeCCc
Confidence 99985322 23344577888999999999998887544555554443
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=1.9e-05 Score=57.53 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=52.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH---hhc--CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD--GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~--~~ 80 (232)
.++.+|+|+||+|++|...++.+...|++|+++++++++. +.++++.. -+. .|.++.+-.++ +-+ ++
T Consensus 27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~--~~~~~lGa----~~v--i~~~~~d~~~~v~~~t~g~g~ 98 (179)
T d1qora2 27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA--QSALKAGA----WQV--INYREEDLVERLKEITGGKKV 98 (179)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHHHTC----SEE--EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH--HHHHhcCC----eEE--EECCCCCHHHHHHHHhCCCCe
Confidence 3578999999999999999999999999999999998643 23333321 123 35555443333 322 46
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|+|+.+.|
T Consensus 99 d~v~d~~g 106 (179)
T d1qora2 99 RVVYDSVG 106 (179)
T ss_dssp EEEEECSC
T ss_pred EEEEeCcc
Confidence 99998875
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=4.4e-05 Score=55.28 Aligned_cols=74 Identities=16% Similarity=0.137 Sum_probs=49.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+|+|.|| ||.+++++..|.+.|.+|+++.|+.++.+ ...+.+.. ...+..+..| +. ...++|+||
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~-~l~~~~~~-~~~~~~~~~~-----~~--~~~~~dliI 84 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAE-ELAKLFAH-TGSIQALSMD-----EL--EGHEFDLII 84 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH-HHHHHTGG-GSSEEECCSG-----GG--TTCCCSEEE
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHH-HHHHHHhh-cccccccccc-----cc--cccccceee
Confidence 367899999998 77999999999999999999999986543 22222222 1223332221 11 124689999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
|+..
T Consensus 85 N~Tp 88 (170)
T d1nyta1 85 NATS 88 (170)
T ss_dssp ECCS
T ss_pred cccc
Confidence 8863
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.59 E-value=0.0001 Score=53.12 Aligned_cols=75 Identities=20% Similarity=0.159 Sum_probs=52.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC-CcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi 84 (232)
-++.+++|.|+ |++|...++.+...|++|+++++++++.+ ..+++.. . +.+ |.. +.+..+...+++|.++
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~--~a~~lGa---~-~~i--~~~~~~~~~~~~~~~~d~vi 96 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE--DAMKMGA---D-HYI--ATLEEGDWGEKYFDTFDLIV 96 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH--HHHHHTC---S-EEE--EGGGTSCHHHHSCSCEEEEE
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHH--HhhccCC---c-EEe--eccchHHHHHhhhcccceEE
Confidence 35778999997 89999999888888999999999987643 3333321 1 222 222 3344555566789999
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
.+.+.
T Consensus 97 ~~~~~ 101 (168)
T d1piwa2 97 VCASS 101 (168)
T ss_dssp ECCSC
T ss_pred EEecC
Confidence 98763
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=6e-05 Score=54.36 Aligned_cols=74 Identities=22% Similarity=0.211 Sum_probs=54.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
-++.+|+|.|+ |++|...++.+...|++++++++++++. +..+++.. .+. .|..+.+......+++|++|.
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~--~~a~~lGa----d~~--i~~~~~~~~~~~~~~~D~vid 99 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR--EAAKALGA----DEV--VNSRNADEMAAHLKSFDFILN 99 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHTC----SEE--EETTCHHHHHTTTTCEEEEEE
T ss_pred CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH--HHHhccCC----cEE--EECchhhHHHHhcCCCceeee
Confidence 35678999986 8999999999988999999999887643 33334322 122 356666666666678999999
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+.|
T Consensus 100 ~~g 102 (168)
T d1uufa2 100 TVA 102 (168)
T ss_dssp CCS
T ss_pred eee
Confidence 986
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.56 E-value=7e-05 Score=53.52 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=33.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK 46 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~ 46 (232)
|+|.|.|+ |.||..++..|.+.|++|.+++|++....
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~ 37 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC 37 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence 57999999 99999999999999999999999986543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.53 E-value=9e-05 Score=54.06 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=49.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcch----HHHhhc--
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS----FDSAVD-- 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~-- 78 (232)
.+|.+|+|+|| |++|...++.+...|+ +|+++++++++. +..+++. . -+.+...-.+..+ +.+...
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~--~~a~~lG---a-~~vi~~~~~~~~~~~~~i~~~~~~~ 99 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL--KLAEEIG---A-DLTLNRRETSVEERRKAIMDITHGR 99 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH--HHHHHTT---C-SEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEECC-Cccchhheecccccccccccccccccccc--ccccccc---c-eEEEeccccchHHHHHHHHHhhCCC
Confidence 46789999997 8999999999999998 799999988643 2333331 1 1232221122222 222222
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|+||.+.|
T Consensus 100 g~Dvvid~vG 109 (182)
T d1vj0a2 100 GADFILEATG 109 (182)
T ss_dssp CEEEEEECSS
T ss_pred CceEEeecCC
Confidence 5799999876
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=0.00021 Score=50.51 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=57.6
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~A 87 (232)
.++|.|. |-+|..+++.|.+.|++|++++.+++... ...+... ...+.++.+|.++++.++++ ++++|.+|-+.
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~-~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI-KQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHH-HHHHHhh--cCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence 5888888 67999999999999999999998875322 2222222 24678999999999998777 77889998653
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.50 E-value=0.00021 Score=51.30 Aligned_cols=75 Identities=20% Similarity=0.140 Sum_probs=49.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCC--CcchHHHhh-----cC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL--EEGSFDSAV-----DG 79 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~-----~~ 79 (232)
.+.+++|+| +|++|...++.+...|++|+++++++++. +...++. ... .+..|-. +.+.+.+.+ .+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~--~~a~~~g---a~~-~~~~~~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL--EVAKNCG---ADV-TLVVDPAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHTT---CSE-EEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHH--HHHHHcC---CcE-EEeccccccccchhhhhhhcccccC
Confidence 467899997 68999999999999999999999988643 2223322 122 2223332 333333333 25
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.++|
T Consensus 99 ~D~vid~~g 107 (170)
T d1e3ja2 99 PNVTIDCSG 107 (170)
T ss_dssp CSEEEECSC
T ss_pred CceeeecCC
Confidence 899999986
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=4.8e-05 Score=55.51 Aligned_cols=38 Identities=39% Similarity=0.423 Sum_probs=34.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
+..+||+||+||+|...++.+...|++|++++|++++.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~ 69 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence 34899999999999999999999999999999988653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.47 E-value=7.5e-05 Score=52.86 Aligned_cols=40 Identities=15% Similarity=0.288 Sum_probs=36.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.+...++|.|.||.|.||..+++.|.+.||+|.+.+|++.
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~ 44 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 44 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence 4556679999999999999999999999999999999875
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00011 Score=47.51 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=49.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++++|+|+|.|. |..|.++++.|.++|++|++.+.++..... +.+.. ...++.... + ...++++|.||
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~---~~~~~---~~~~~~~~~-~----~~~~~~~d~vi 69 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL---DKLPE---AVERHTGSL-N----DEWLMAADLIV 69 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG---GGSCT---TSCEEESBC-C----HHHHHHCSEEE
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH---HHHhh---ccceeeccc-c----hhhhccCCEEE
Confidence 478999999998 668999999999999999999987754322 12211 122222222 1 13345789998
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
-.-|
T Consensus 70 ~SPG 73 (93)
T d2jfga1 70 ASPG 73 (93)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 7655
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.37 E-value=0.00064 Score=48.43 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=29.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|.|.|+ |.+|..+++.|.+.|++|++.+|+++
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~ 34 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQS 34 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCch
Confidence 35777766 99999999999999999999999864
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.33 E-value=0.00013 Score=53.54 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=28.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEE-EEcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDP 42 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~-~~r~~ 42 (232)
..|||+||+|++|+..++.+...|+++++ +++++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~ 66 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ 66 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSH
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchH
Confidence 68999999999999999999889987555 44444
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.32 E-value=0.00019 Score=51.88 Aligned_cols=74 Identities=18% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
..++|+|+|.|+ ||.+++++..|.+.+.+|+++.|+.++.+ ...+.+.. ..++.....|-. .+..+|+||
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~-~l~~~~~~-~~~~~~~~~~~~-------~~~~~diiI 84 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTK-ELAERFQP-YGNIQAVSMDSI-------PLQTYDLVI 84 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHH-HHHHHHGG-GSCEEEEEGGGC-------CCSCCSEEE
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHH-HHHHHHhh-ccccchhhhccc-------cccccceee
Confidence 468899999987 66899999999998889999999986543 22233322 234444444422 235689999
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
|+..
T Consensus 85 N~tp 88 (171)
T d1p77a1 85 NATS 88 (171)
T ss_dssp ECCC
T ss_pred eccc
Confidence 9864
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.00033 Score=50.34 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=51.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----CC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~ 80 (232)
++.+|+|.|+ |++|...++.+...|+ +|+++++++++. +..+++. .-+.+..+-.+..+..+.++ ++
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl--~~a~~~G----a~~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL--SKAKEIG----ADLVLQISKESPQEIARKVEGQLGCKP 98 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHHTT----CSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHH--HHHHHhC----CcccccccccccccccccccccCCCCc
Confidence 4568999987 9999999999999998 799999987543 2233331 12344444445544444432 68
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.+.|
T Consensus 99 Dvvid~~G 106 (171)
T d1pl8a2 99 EVTIECTG 106 (171)
T ss_dssp SEEEECSC
T ss_pred eEEEeccC
Confidence 99999986
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.18 E-value=0.00046 Score=49.26 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=32.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
-++.+|+|.|+ |++|...++.+...|++|+++++++++
T Consensus 26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~ 63 (166)
T d1llua2 26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK 63 (166)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH
Confidence 35678999886 999999999888889999999998754
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.16 E-value=0.0016 Score=43.31 Aligned_cols=71 Identities=17% Similarity=0.202 Sum_probs=51.2
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+++|+++|.|++. +|..-++.|++.|++|++++...... ...+.. ..++.+++-+..+ ..+++++.|+
T Consensus 9 ~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~~----~~~~~~-~~~i~~~~~~~~~-----~dl~~~~lv~ 77 (113)
T d1pjqa1 9 QLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIPQ----FTVWAN-EGMLTLVEGPFDE-----TLLDSCWLAI 77 (113)
T ss_dssp CCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCHH----HHHHHT-TTSCEEEESSCCG-----GGGTTCSEEE
T ss_pred EeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCChH----HHHHHh-cCCceeeccCCCH-----HHhCCCcEEe
Confidence 47899999999876 99999999999999999988766532 222222 3467777766643 2355678777
Q ss_pred Ec
Q 026852 85 HT 86 (232)
Q Consensus 85 ~~ 86 (232)
.+
T Consensus 78 ~a 79 (113)
T d1pjqa1 78 AA 79 (113)
T ss_dssp EC
T ss_pred ec
Confidence 54
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.12 E-value=0.00036 Score=50.05 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=49.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-----cCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~ 80 (232)
.+.+++|.|++|++|..+++.+...|+ +|+++++++++. +.++++.. . +.+. .++.+..++.. +++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~--~~~~~~Ga---~-~~i~--~~~~~~~~~~~~~~~~~~~ 98 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV--EAAKRAGA---D-YVIN--ASMQDPLAEIRRITESKGV 98 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH--HHHHHHTC---S-EEEE--TTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhH--HHHHHcCC---c-eeec--cCCcCHHHHHHHHhhcccc
Confidence 567899999999999999999998885 888888887532 22333321 1 3333 33333333333 247
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.++|
T Consensus 99 d~vid~~g 106 (170)
T d1jvba2 99 DAVIDLNN 106 (170)
T ss_dssp EEEEESCC
T ss_pred hhhhcccc
Confidence 99999886
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.11 E-value=0.00022 Score=51.68 Aligned_cols=73 Identities=18% Similarity=0.149 Sum_probs=48.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCc---chHHHhhc--CC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE---GSFDSAVD--GC 80 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~ 80 (232)
++.+|+|.|+ |++|...++.+...|+ +|+++++++++. +..+++.. .+++ |.++. +.+.+..+ ++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~--~~a~~lGa----~~~i--~~~~~~~~~~v~~~t~g~G~ 97 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV--EAAKFYGA----TDIL--NYKNGHIEDQVMKLTNGKGV 97 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH--HHHHHHTC----SEEE--CGGGSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH--HHHHhhCc----cccc--cccchhHHHHHHHHhhccCc
Confidence 5678999986 8999999999998897 699998887543 22333321 2232 33332 23334433 48
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.++|
T Consensus 98 D~vid~~g 105 (174)
T d1jqba2 98 DRVIMAGG 105 (174)
T ss_dssp EEEEECSS
T ss_pred ceEEEccC
Confidence 99999986
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.08 E-value=0.00022 Score=52.33 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=32.7
Q ss_pred CCcEEEE-ECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcc
Q 026852 7 EEKVVCV-TGASGFVASWLVKLLLQRGYTVKATVRDPNSPK 46 (232)
Q Consensus 7 ~~~~ilI-tGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~ 46 (232)
++..++| +||+|++|...++.....|++|+++.|++++.+
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~ 68 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence 4444555 799999999999999889999999998876543
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.07 E-value=0.0017 Score=47.17 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=49.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|++.|.|.+. ||+.+++.+...|.+|++.+|++.... ..-.++++++++.+|+|+
T Consensus 39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~~--------------------~~~~~~l~ell~~sDiv~ 97 (181)
T d1qp8a1 39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEGP--------------------WRFTNSLEEALREARAAV 97 (181)
T ss_dssp CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCSS--------------------SCCBSCSHHHHTTCSEEE
T ss_pred cccCceEEEecccc-ccccceeeeeccccccccccccccccc--------------------eeeeechhhhhhccchhh
Confidence 47899999999877 999999999999999999998765321 111246778999999998
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 98 ~~~ 100 (181)
T d1qp8a1 98 CAL 100 (181)
T ss_dssp ECC
T ss_pred ccc
Confidence 765
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.06 E-value=0.0016 Score=43.27 Aligned_cols=67 Identities=18% Similarity=0.156 Sum_probs=53.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 84 (232)
..+|.|.| +|-+|+-++....+.|++|++++.+++..... -.-.++.+|..|.+.+.++.+ ++|+|-
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---------va~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---------VAHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---------GSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---------cCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 35799999 67899999999999999999999988754321 112578899999999998875 578884
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.04 E-value=0.00032 Score=50.39 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=33.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP 45 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~ 45 (232)
++++|+|.|+ ||.+++++..|.+.|+ +|.++.|++++.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka 54 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG 54 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH
Confidence 6788999988 7899999999999997 799999988643
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.02 E-value=0.00058 Score=49.61 Aligned_cols=75 Identities=17% Similarity=0.254 Sum_probs=49.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC----CCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA----TERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
|+|.|.|| |-.|.+++..|.+.|++|.+..|..+. +..+.+... .........++.-.+++.++++++|+||
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~---~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii 76 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT---EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL 76 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH---HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH---HHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhh
Confidence 47889988 669999999999999999999886542 222222111 1111111223344677888999999998
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 77 ~av 79 (180)
T d1txga2 77 LGV 79 (180)
T ss_dssp ECS
T ss_pred ccc
Confidence 764
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.98 E-value=0.00012 Score=53.86 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=50.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCC---CCceEEEEcCCCCcchHHHhhcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDSAVDGCD 81 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d 81 (232)
++.+++|.|.||+. .|.+++..|.+.|++|.+.+|+++... .+.+.... ...+. +.-++.-..++.++++++|
T Consensus 4 ~~~m~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~--~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad 79 (189)
T d1n1ea2 4 LLYLNKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVR--LVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAE 79 (189)
T ss_dssp CCCEEEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHH--HHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCS
T ss_pred cceeceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHH--HHhhcccccccccccc-cccccccchhhhhccCCCC
Confidence 34457899999866 999999999999999999999864322 11111100 01111 1122333456778889999
Q ss_pred EEEEcc
Q 026852 82 GVFHTA 87 (232)
Q Consensus 82 ~vi~~A 87 (232)
+||.+.
T Consensus 80 ~iiiav 85 (189)
T d1n1ea2 80 IILFVI 85 (189)
T ss_dssp CEEECS
T ss_pred EEEEcC
Confidence 998664
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.78 E-value=0.0017 Score=47.87 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=29.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|.|. |.|++|..++..|++.|++|+++|.+++
T Consensus 1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~ 34 (202)
T d1mv8a2 1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSST 34 (202)
T ss_dssp CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHH
Confidence 356677 7899999999999999999999998763
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.73 E-value=0.0012 Score=46.89 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=31.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++.+|+|.|+ |.+|...++.+...|++|+++++++++
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r 63 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK 63 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHH
Confidence 5678999876 889999999999999999999988754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.72 E-value=0.012 Score=42.11 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=49.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
.+|-|.|- |-+|..+++.|++.|++|++.+|++++.+. +.+......... -....+++...+..+|.+|-+.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~--l~~~~~~~~~~~----~a~~~~~~~~~~~~~~~ii~~~ 74 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDD--FLANEAKGTKVL----GAHSLEEMVSKLKKPRRIILLV 74 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHH--HHHTTTTTSSCE----ECSSHHHHHHHBCSSCEEEECS
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHH--HHHhcccccccc----chhhhhhhhhhhcccceEEEec
Confidence 46777776 889999999999999999999999864321 111111111111 1345677778888899888764
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.69 E-value=0.0018 Score=50.37 Aligned_cols=84 Identities=23% Similarity=0.252 Sum_probs=51.1
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEc------CCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHH
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR------DPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS 75 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (232)
+++.+++++++|.|- |-+|+++++.|.+.|++|++++- +++....+.+.+.......+..+.......+++
T Consensus 30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~~~~-- 106 (293)
T d1hwxa1 30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSI-- 106 (293)
T ss_dssp CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCCSCG--
T ss_pred CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCCccc--
Confidence 356789999999998 68999999999999999988763 344433333333322222221111111112222
Q ss_pred hhcCCCEEEEccc
Q 026852 76 AVDGCDGVFHTAS 88 (232)
Q Consensus 76 ~~~~~d~vi~~Ag 88 (232)
+-..||++|-+|-
T Consensus 107 ~~~~~DIliPaA~ 119 (293)
T d1hwxa1 107 LEVDCDILIPAAS 119 (293)
T ss_dssp GGCCCSEEEECSS
T ss_pred ccCCccEEeeccc
Confidence 1237899999984
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.69 E-value=0.002 Score=46.41 Aligned_cols=77 Identities=10% Similarity=0.019 Sum_probs=50.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEE-cCCCC-cchHHHhh--cCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFK-ANLLE-EGSFDSAV--DGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~-~~~~~~~~--~~~ 80 (232)
-++.+|+|.|+ |++|...++.+...|+ +|+++++++++. +..+++-. .+.+. -|-.+ .+.+.+.. .++
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl--~~Ak~~GA----~~~in~~~~~~~~~~~~~~~~g~G~ 100 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF--EKAMAVGA----TECISPKDSTKPISEVLSEMTGNNV 100 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHHTC----SEEECGGGCSSCHHHHHHHHHTSCC
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH--HHHHhcCC----cEEECccccchHHHHHHHHhccccc
Confidence 35678999986 8999999999999995 799999998764 23333322 22322 12111 22233332 368
Q ss_pred CEEEEcccc
Q 026852 81 DGVFHTASP 89 (232)
Q Consensus 81 d~vi~~Ag~ 89 (232)
|++|.+.|.
T Consensus 101 d~vi~~~g~ 109 (176)
T d1d1ta2 101 GYTFEVIGH 109 (176)
T ss_dssp CEEEECSCC
T ss_pred eEEEEeCCc
Confidence 999988763
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.68 E-value=0.0013 Score=47.22 Aligned_cols=74 Identities=16% Similarity=0.116 Sum_probs=46.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEE-EEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHH---Hhhc-CC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVK-ATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD---SAVD-GC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~-~~ 80 (232)
-++.+|+|.|+ |++|...++.+...|++++ ++++++++. +..+++. ..+++ |.++.+..+ ++.+ ++
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~--~~a~~~G----a~~~i--~~~~~~~~~~i~~~t~gg~ 97 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL--ELAKQLG----ATHVI--NSKTQDPVAAIKEITDGGV 97 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH--HHHHHHT----CSEEE--ETTTSCHHHHHHHHTTSCE
T ss_pred CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH--HHHHHcC----CeEEE--eCCCcCHHHHHHHHcCCCC
Confidence 35678999997 8999999999888898654 556665432 2333332 12333 334433332 3322 47
Q ss_pred CEEEEccc
Q 026852 81 DGVFHTAS 88 (232)
Q Consensus 81 d~vi~~Ag 88 (232)
|++|.+.|
T Consensus 98 D~vid~~G 105 (174)
T d1f8fa2 98 NFALESTG 105 (174)
T ss_dssp EEEEECSC
T ss_pred cEEEEcCC
Confidence 99999976
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.0031 Score=43.99 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=27.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-C---eEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-Y---TVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~---~V~~~~r~~~ 43 (232)
|+|-|.||||.+|..+++.|+++. + +++...++.+
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 579999999999999999888763 2 4565655544
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.67 E-value=0.011 Score=40.15 Aligned_cols=95 Identities=18% Similarity=0.078 Sum_probs=58.8
Q ss_pred CCCCCCCCcEEEEECCC---ChhHHHHHHHHHHCC-CeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh
Q 026852 1 MMSGEGEEKVVCVTGAS---GFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 1 ~~~~~~~~~~ilItGa~---g~iG~~~~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (232)
||+..++.|.|.|.||| +..|..+.+.|.+.| ++|+.+ |++..+. . .+. -..++.++
T Consensus 1 ~L~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pV--nP~~~~i---~-------G~~-------~y~sl~dl 61 (129)
T d2csua1 1 MLDYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPV--NIKEEEV---Q-------GVK-------AYKSVKDI 61 (129)
T ss_dssp CCCTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEE--CSSCSEE---T-------TEE-------CBSSTTSC
T ss_pred ChhHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEe--ccCcccc---C-------CeE-------eecchhhc
Confidence 67777888999999999 899999999987665 577766 4432111 0 011 11122222
Q ss_pred hcCCCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEecccc
Q 026852 77 VDGCDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSIG 132 (232)
Q Consensus 77 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~~ 132 (232)
=+.+|.++-+..+ ..+..+++.+.+. +.+.++.+|+..
T Consensus 62 p~~vDlvvi~vp~-----------------~~~~~~~~~~~~~-g~~~~vi~s~Gf 99 (129)
T d2csua1 62 PDEIDLAIIVVPK-----------------RFVKDTLIQCGEK-GVKGVVIITAGF 99 (129)
T ss_dssp SSCCSEEEECSCH-----------------HHHHHHHHHHHHH-TCCEEEECCCSS
T ss_pred CCCCceEEEecCh-----------------HHhHHHHHHHHHc-CCCEEEEecccc
Confidence 2357887755311 1133456666776 778888887763
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.66 E-value=0.0016 Score=46.24 Aligned_cols=63 Identities=21% Similarity=0.362 Sum_probs=44.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+|-|.|- |-+|+.+++.|++.|++|++.+|++++. +++..... . ..++..++++++|+||-+.
T Consensus 2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~-----~~~~~~~~--~-------~~~~~~e~~~~~d~ii~~v 64 (161)
T d1vpda2 2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAI-----ADVIAAGA--E-------TASTAKAIAEQCDVIITML 64 (161)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-----HHHHHTTC--E-------ECSSHHHHHHHCSEEEECC
T ss_pred EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchh-----HHHHHhhh--h-------hcccHHHHHhCCCeEEEEc
Confidence 5667755 8899999999999999999999987532 22221111 1 1234566777899998774
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.66 E-value=0.0026 Score=45.56 Aligned_cols=78 Identities=12% Similarity=0.050 Sum_probs=47.9
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC-cchHHHhh--cCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAV--DGCD 81 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~--~~~d 81 (232)
-+|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+ ...++. ....+...|..+ .+.+.+.. .++|
T Consensus 27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~--~a~~~G---a~~~i~~~~~~~~~~~~~~~~~~~G~D 100 (176)
T d2jhfa2 27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA--KAKEVG---ATECVNPQDYKKPIQEVLTEMSNGGVD 100 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH--HHHHTT---CSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHH--HHHHhC---CeeEEecCCchhHHHHHHHHHhcCCCC
Confidence 35679999999 6799999999999985 8888988886542 222221 111111122211 11222222 3689
Q ss_pred EEEEcccc
Q 026852 82 GVFHTASP 89 (232)
Q Consensus 82 ~vi~~Ag~ 89 (232)
++|.+.|.
T Consensus 101 ~vid~~G~ 108 (176)
T d2jhfa2 101 FSFEVIGR 108 (176)
T ss_dssp EEEECSCC
T ss_pred EEEecCCc
Confidence 99998763
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.65 E-value=0.0015 Score=44.49 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=51.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh-hcCCCEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 86 (232)
|.++|.|. |.+|..+++.| ++.+|++++.+++.. +.+. ...+.++.+|.++++.++++ +++++.+|-+
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~-----~~~~--~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVR-----KKVL--RSGANFVHGDPTRVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHH-----HHHH--HTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHH-----HHHH--hcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence 45788886 66899999998 467788888877532 2221 13578899999999988887 6788888855
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.64 E-value=0.0023 Score=47.15 Aligned_cols=39 Identities=26% Similarity=0.272 Sum_probs=34.2
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++++|+|+|.| -|-+|+++++.|.+.|++|++.+.++.
T Consensus 23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~ 61 (201)
T d1c1da1 23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTE 61 (201)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHH
Confidence 468999999998 667999999999999999998887653
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.61 E-value=0.0016 Score=45.47 Aligned_cols=34 Identities=32% Similarity=0.379 Sum_probs=27.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC---eEEEEEcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDP 42 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~---~V~~~~r~~ 42 (232)
++|.|.||||+.|..+++.|.++++ ++..+..+.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~ 39 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence 6799999999999999999987654 566554443
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.56 E-value=0.0021 Score=45.99 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=46.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-----cC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DG 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~ 79 (232)
-++.+|+|.|+ ||+|...++.+...|+ .|+++++++++. +..+++-. -+.+..+ .+.+.+.+.+ .+
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~--~~ak~lGa----~~~i~~~-~~~~~~~~~~~~~~~~g 98 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF--ARAKEFGA----TECINPQ-DFSKPIQEVLIEMTDGG 98 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH--HHHHHHTC----SEEECGG-GCSSCHHHHHHHHTTSC
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH--HHHHHhCC----cEEEeCC-chhhHHHHHHHHHcCCC
Confidence 36678999998 5899999999999996 566666666543 33333322 1222211 1122333332 36
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.+.|
T Consensus 99 ~D~vid~~G 107 (176)
T d2fzwa2 99 VDYSFECIG 107 (176)
T ss_dssp BSEEEECSC
T ss_pred CcEeeecCC
Confidence 899999986
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.50 E-value=0.0035 Score=44.96 Aligned_cols=74 Identities=15% Similarity=0.020 Sum_probs=48.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc----hHHHhh--c
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG----SFDSAV--D 78 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~~~--~ 78 (232)
-++.+|+|.|+ |++|...++.+...|+ +|+++++++++. +..+++- ..+.+ |.++.+ .+.... .
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl--~~a~~lG----a~~~i--~~~~~d~~~~~~~~~~~~~ 96 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF--PKAIELG----ATECL--NPKDYDKPIYEVICEKTNG 96 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH--HHHHHTT----CSEEE--CGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH--HHHHHcC----CcEEE--cCCCchhHHHHHHHHhcCC
Confidence 46678999986 8999999999999996 688888887654 2233332 22333 322222 222222 2
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|++|.++|
T Consensus 97 G~d~vid~~g 106 (174)
T d1p0fa2 97 GVDYAVECAG 106 (174)
T ss_dssp CBSEEEECSC
T ss_pred CCcEEEEcCC
Confidence 6799998876
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.44 E-value=0.005 Score=44.14 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=48.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhh-----cC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DG 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~ 79 (232)
-++.+|+|.|+ |+||...++.+...|+ .|+++++++++. +..+++.. .+.+...-.+ +.+.... .+
T Consensus 27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~--~~a~~~Ga----~~~i~~~~~~-~~~~~~~~~~~~~G 98 (174)
T d1e3ia2 27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF--PKAKALGA----TDCLNPRELD-KPVQDVITELTAGG 98 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHTTC----SEEECGGGCS-SCHHHHHHHHHTSC
T ss_pred CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH--HHHHHhCC----CcccCCccch-hhhhhhHhhhhcCC
Confidence 46678999975 9999999999999998 577788887653 23333321 2232221111 1222222 36
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.++|
T Consensus 99 ~d~vie~~G 107 (174)
T d1e3ia2 99 VDYSLDCAG 107 (174)
T ss_dssp BSEEEESSC
T ss_pred CcEEEEecc
Confidence 899999986
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.39 E-value=0.0058 Score=43.36 Aligned_cols=58 Identities=22% Similarity=0.153 Sum_probs=45.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.||+|+|.|.+.-+|+-++..|.+.|+.|+.+.+... .+.+..+++|+|
T Consensus 33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------------~l~~~~~~ADiv 84 (166)
T d1b0aa1 33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------------NLRHHVENADLL 84 (166)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------------CHHHHHHHCSEE
T ss_pred cccccceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------------hhHHHHhhhhHh
Confidence 3578999999999999999999999999999987754332 123445567888
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|..+|.
T Consensus 85 I~a~G~ 90 (166)
T d1b0aa1 85 IVAVGK 90 (166)
T ss_dssp EECSCC
T ss_pred hhhccC
Confidence 888874
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.39 E-value=0.0027 Score=44.47 Aligned_cols=63 Identities=24% Similarity=0.279 Sum_probs=42.9
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+|-|.| .|-+|+.+++.|+++|++|++.+|++++......+.. .+ .++..++++++|+||-+.
T Consensus 2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-----~~---------~~~~~e~~~~~diIi~~v 64 (152)
T d1i36a2 2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTV-----GV---------TETSEEDVYSCPVVISAV 64 (152)
T ss_dssp EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHH-----TC---------EECCHHHHHTSSEEEECS
T ss_pred EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcc-----cc---------cccHHHHHhhcCeEEEEe
Confidence 566665 5999999999999999999988887754322111111 11 123456778899999775
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.37 E-value=0.0026 Score=45.59 Aligned_cols=80 Identities=20% Similarity=0.060 Sum_probs=53.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCC--CCcchHHHhhcCCCE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL--LEEGSFDSAVDGCDG 82 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~~~d~ 82 (232)
.++||+++|.|.|.-+|+-++..|+++|+.|+.+.++...... ...... -.+....|+ ...+.+++....+|+
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~lk~~~~~aDI 100 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT-RGESLK----LNKHHVEDLGEYSEDLLKKCSLDSDV 100 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE-SCCCSS----CCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc-ccccee----eeeeccccccccchhHHhhccccCCE
Confidence 5899999999999999999999999999999877654321100 000000 001111222 345568888888999
Q ss_pred EEEcccc
Q 026852 83 VFHTASP 89 (232)
Q Consensus 83 vi~~Ag~ 89 (232)
+|..+|.
T Consensus 101 vIsavG~ 107 (171)
T d1edza1 101 VITGVPS 107 (171)
T ss_dssp EEECCCC
T ss_pred EEEccCC
Confidence 9988874
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.32 E-value=0.0031 Score=46.16 Aligned_cols=74 Identities=18% Similarity=0.087 Sum_probs=47.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcc---hHHHhhc--C
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG---SFDSAVD--G 79 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~ 79 (232)
-.+.+|+|.|+ |++|...+..+...|. +|+++++++++. +..+++ .. .+. .|-.+.+ .+.++.+ +
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl--~~a~~~---Ga-~~~--~~~~~~~~~~~i~~~t~g~g 94 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL--AHAKAQ---GF-EIA--DLSLDTPLHEQIAALLGEPE 94 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHHT---TC-EEE--ETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh--Hhhhhc---cc-cEE--EeCCCcCHHHHHHHHhCCCC
Confidence 46779999986 8999988888878876 788888887543 222222 11 222 2223322 3333333 5
Q ss_pred CCEEEEccc
Q 026852 80 CDGVFHTAS 88 (232)
Q Consensus 80 ~d~vi~~Ag 88 (232)
+|++|.+.|
T Consensus 95 ~D~vid~vG 103 (195)
T d1kola2 95 VDCAVDAVG 103 (195)
T ss_dssp EEEEEECCC
T ss_pred cEEEEECcc
Confidence 799999987
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.31 E-value=0.0027 Score=46.67 Aligned_cols=65 Identities=18% Similarity=0.109 Sum_probs=48.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|++.|.|- |.||+.+++.|..-|++|++.++..+... . . +....+++.++++++|+|+
T Consensus 40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~---~--~------------~~~~~~~l~~~l~~sDii~ 101 (197)
T d1j4aa1 40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPEL---E--K------------KGYYVDSLDDLYKQADVIS 101 (197)
T ss_dssp CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH---H--H------------TTCBCSCHHHHHHHCSEEE
T ss_pred cccCCeEEEecc-cccchhHHHhHhhhcccccccCccccccc---c--c------------ceeeecccccccccccccc
Confidence 478899999986 55999999999999999999887654211 1 0 1113456788888999888
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 102 ~~~ 104 (197)
T d1j4aa1 102 LHV 104 (197)
T ss_dssp ECS
T ss_pred ccC
Confidence 775
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.29 E-value=0.0037 Score=44.27 Aligned_cols=64 Identities=22% Similarity=0.202 Sum_probs=44.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++|-+. |.|-+|+++++.|+++||+|.+.+|++++.+ .+.... ........++++.+|+|+-+.
T Consensus 2 ~kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~-----~~~~~~---------~~~~~~~~e~~~~~diii~~v 65 (162)
T d3cuma2 2 KQIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVD-----GLVAAG---------ASAARSARDAVQGADVVISML 65 (162)
T ss_dssp CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHH-----HHHHTT---------CEECSSHHHHHTSCSEEEECC
T ss_pred CEEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhh-----hhhhhh---------ccccchhhhhccccCeeeecc
Confidence 456666 4588999999999999999999999875322 221111 111235567788899888765
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.011 Score=42.11 Aligned_cols=39 Identities=23% Similarity=0.146 Sum_probs=35.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
-.++||+++|.|.+.-+|+-++..|+++|+.|+.+....
T Consensus 35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 357899999999999999999999999999999876554
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.0083 Score=42.40 Aligned_cols=69 Identities=25% Similarity=0.127 Sum_probs=51.1
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++.||+++|.|- |-||+.+++.+...|++|++++++|-+ +++.. .|-.....++++++..|++
T Consensus 20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~----al~A~-----------~dG~~v~~~~~a~~~adiv 83 (163)
T d1li4a1 20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN----ALQAA-----------MEGYEVTTMDEACQEGNIF 83 (163)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH----HHHHH-----------HTTCEECCHHHHTTTCSEE
T ss_pred ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch----hHHhh-----------cCceEeeehhhhhhhccEE
Confidence 3578899999885 579999999999999999999998743 23222 2222334566777888988
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|-+.|
T Consensus 84 vtaTG 88 (163)
T d1li4a1 84 VTTTG 88 (163)
T ss_dssp EECSS
T ss_pred EecCC
Confidence 87765
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.13 E-value=0.0052 Score=42.84 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=25.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC----CeEEEEEcC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG----YTVKATVRD 41 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g----~~V~~~~r~ 41 (232)
++|-|.||||+.|..+++.|+++. .++..++.+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~ 37 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS 37 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence 479999999999999999988753 345544444
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.12 E-value=0.007 Score=43.81 Aligned_cols=66 Identities=21% Similarity=0.108 Sum_probs=48.0
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.+|++.|.| .|.||+++++.+..-|++|++.++..+... .... .+ ...+++++++++|+|+
T Consensus 41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~---~~~~-----~~--------~~~~l~ell~~sDiv~ 103 (184)
T d1ygya1 41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPAR---AAQL-----GI--------ELLSLDDLLARADFIS 103 (184)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHH---HHHH-----TC--------EECCHHHHHHHCSEEE
T ss_pred cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhH---Hhhc-----Cc--------eeccHHHHHhhCCEEE
Confidence 46788888888 578999999999999999999988764321 1111 01 2346778888999988
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
...
T Consensus 104 ~~~ 106 (184)
T d1ygya1 104 VHL 106 (184)
T ss_dssp ECC
T ss_pred EcC
Confidence 665
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.11 E-value=0.0009 Score=48.09 Aligned_cols=118 Identities=11% Similarity=0.002 Sum_probs=62.5
Q ss_pred cEEEEECCC-ChhHHHHHHHHHHCC----CeEEEEEcCCCCcchhhhhhh-----cCCCCceEEEEcCCCCcchHHHhhc
Q 026852 9 KVVCVTGAS-GFVASWLVKLLLQRG----YTVKATVRDPNSPKTEHLREL-----DGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 9 ~~ilItGa~-g~iG~~~~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
+||.|.||+ .|.+..++.-++... -++++++++++....+..+.. .....+.. +....+..++++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~-----~~~~td~~~al~ 76 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIE-----IHLTLDRRRALD 76 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCE-----EEEESCHHHHHT
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCce-----eeecCCchhhcC
Confidence 578888874 456666666555442 378889988754222222211 11111111 122334467788
Q ss_pred CCCEEEEccccccc--CC------------CC---ch--hhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 79 GCDGVFHTASPVIF--LS------------DN---PQ--ADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~--~~------------~~---~~--~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
++|+||+.|+.... ++ .+ .+ .....-|+.....+++...++.+..-++++|-.
T Consensus 77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vtNP 148 (169)
T d1s6ya1 77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNP 148 (169)
T ss_dssp TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeCCh
Confidence 99999999974211 00 00 00 011234666666777777777444455555544
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.10 E-value=0.0035 Score=45.23 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=25.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKAT 38 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~ 38 (232)
++|.|.||||+.|.++++.|.++ .+++..+
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l 32 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRHPHMTITAL 32 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence 68999999999999999999998 5566543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.06 E-value=0.0059 Score=43.29 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=28.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~~ 43 (232)
|+|+|.|. |.||..+++.|.+.|+ +|++.+|+++
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~ 37 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE 37 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence 57999975 9999999999999996 6777777764
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.05 E-value=0.0078 Score=44.13 Aligned_cols=65 Identities=18% Similarity=0.124 Sum_probs=48.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
..+.+|++.|.|.+ .||+.+++.|..-|++|++.++....... ..+ +..+++++++.+|+|
T Consensus 41 ~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------~~~--------~~~~l~~l~~~~D~v 101 (199)
T d1dxya1 41 KELGQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAYDPYPMKGDH----------PDF--------DYVSLEDLFKQSDVI 101 (199)
T ss_dssp CCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCCSSCC----------TTC--------EECCHHHHHHHCSEE
T ss_pred ccccceeeeeeecc-cccccccccccccceeeeccCCccchhhh----------cch--------hHHHHHHHHHhcccc
Confidence 34678899998865 59999999999999999999987653211 111 234677888889988
Q ss_pred EEcc
Q 026852 84 FHTA 87 (232)
Q Consensus 84 i~~A 87 (232)
+...
T Consensus 102 ~~~~ 105 (199)
T d1dxya1 102 DLHV 105 (199)
T ss_dssp EECC
T ss_pred eeee
Confidence 8665
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.98 E-value=0.0082 Score=42.70 Aligned_cols=75 Identities=17% Similarity=0.070 Sum_probs=46.4
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc--CCCEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 83 (232)
++.+|+|.|+ |++|...++.+...|+ +|+++++++++. +.++++. ..+.+..+-.+.+.+.+... ++|++
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~--~~~~~~g----a~~~i~~~~~~~~~~~~~~~~~g~d~v 104 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL--KLAERLG----ADHVVDARRDPVKQVMELTRGRGVNVA 104 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH--HHHHHTT----CSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH--HHHhhcc----cceeecCcccHHHHHHHhhCCCCceEE
Confidence 5678999986 9999999998888886 667777776432 2233221 22343322222233333322 57999
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|.++|
T Consensus 105 id~~g 109 (172)
T d1h2ba2 105 MDFVG 109 (172)
T ss_dssp EESSC
T ss_pred EEecC
Confidence 99986
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.0033 Score=45.96 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=32.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
|+|.|.|| |-||+.++..++..|++|++.+++++.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 68999999 889999999999999999999999864
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.98 E-value=0.00059 Score=49.37 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=32.5
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
.+++|+|+|.|+ ||.+++++..|.+.| +|.++.|+.++.
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka 53 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKA 53 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence 378899999987 569999999987766 899999997654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.97 E-value=0.0032 Score=43.97 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=32.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
+++|++||.|| |.+|..-++.|++.|++|++++...
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~ 46 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDL 46 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 78999999999 6699999999999999999997543
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.90 E-value=0.015 Score=41.61 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=26.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEEEc
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVR 40 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r 40 (232)
.+|.|.||||+.|..+++.|.++. .++..+..
T Consensus 2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s 34 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSS 34 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence 579999999999999999999874 45555543
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=95.82 E-value=0.017 Score=41.64 Aligned_cols=34 Identities=35% Similarity=0.609 Sum_probs=27.5
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCC-CeEEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATV 39 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~ 39 (232)
.+..+|.|.||||+.|..+++.|.++- .++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 345689999999999999999999884 4655443
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.81 E-value=0.0083 Score=43.75 Aligned_cols=67 Identities=15% Similarity=0.052 Sum_probs=49.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.||++.|.|. |.||+.+++.+...|++|++.++....... ... ++...++++++++.+|+|+
T Consensus 46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~------------~~~~~~~l~~ll~~sD~i~ 109 (193)
T d1mx3a1 46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVE---RAL------------GLQRVSTLQDLLFHSDCVT 109 (193)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHH---HHH------------TCEECSSHHHHHHHCSEEE
T ss_pred eeeCceEEEecc-ccccccceeeeeccccceeeccCcccccch---hhh------------ccccccchhhccccCCEEE
Confidence 478899999965 569999999999999999999887653211 111 1222456778888899887
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
...
T Consensus 110 ~~~ 112 (193)
T d1mx3a1 110 LHC 112 (193)
T ss_dssp ECC
T ss_pred Eee
Confidence 665
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.75 E-value=0.022 Score=40.42 Aligned_cols=77 Identities=12% Similarity=0.087 Sum_probs=44.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC--C---CeEEEEEcCCCCcch--hhhhhhc-CCCCceEEEEcCCCCcchHHHhhcC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR--G---YTVKATVRDPNSPKT--EHLRELD-GATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~--g---~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
..||.|.||++.....++..++.. . .+++++|.++++.+. ..++... ......... -..+..+++++
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~eal~~ 77 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFA-----ATTDPEEAFTD 77 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEE-----EESCHHHHHSS
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceE-----ecCChhhccCC
Confidence 457889999765444455555543 2 379999998865432 1111111 001111111 12356678899
Q ss_pred CCEEEEcccc
Q 026852 80 CDGVFHTASP 89 (232)
Q Consensus 80 ~d~vi~~Ag~ 89 (232)
+|+||..||+
T Consensus 78 AD~Vvitag~ 87 (167)
T d1u8xx1 78 VDFVMAHIRV 87 (167)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 9999999985
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.68 E-value=0.0032 Score=51.84 Aligned_cols=78 Identities=18% Similarity=0.097 Sum_probs=51.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chhh-hhhhc--CCCCceEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEH-LRELD--GATERLHLFKA 65 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~-~~~~~--~~~~~~~~~~~ 65 (232)
++.+|||.|+ ||+|.++++.|+..|. ++.++|.+.-.. ..+. .+.+. ...-++..+..
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 114 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 114 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence 4568999999 5599999999999997 788887542110 0011 11111 22345666777
Q ss_pred CCCCcchHHHhhcCCCEEEEcc
Q 026852 66 NLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 66 D~~~~~~~~~~~~~~d~vi~~A 87 (232)
++.+.. ...++++|+||.+.
T Consensus 115 ~i~~~~--~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 115 KIQDFN--DTFYRQFHIIVCGL 134 (426)
T ss_dssp CGGGBC--HHHHTTCSEEEECC
T ss_pred cccchH--HHHHHhcchheecc
Confidence 776544 36788999999774
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.67 E-value=0.012 Score=42.60 Aligned_cols=68 Identities=19% Similarity=0.127 Sum_probs=49.1
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.++++.|.| .|.||+++++.|...|.+|...+|....... .... .+....++.++++++|+|+
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~~~~------------~~~~~~~l~~~l~~sD~v~ 105 (188)
T d2naca1 41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESV--EKEL------------NLTWHATREDMYPVCDVVT 105 (188)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHH--HHHH------------TCEECSSHHHHGGGCSEEE
T ss_pred eccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccc--cccc------------cccccCCHHHHHHhccchh
Confidence 46788898888 5669999999999999999999987653221 1111 1223456778888999987
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 106 ~~~ 108 (188)
T d2naca1 106 LNC 108 (188)
T ss_dssp ECS
T ss_pred hcc
Confidence 665
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.64 E-value=0.01 Score=44.31 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=30.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
.|+|+|.|| |-.|..++.+|.++|++|.+++|+.
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 367999987 6799999999999999999999864
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=95.55 E-value=0.014 Score=41.30 Aligned_cols=74 Identities=19% Similarity=0.179 Sum_probs=54.1
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+.-+++|.|+ |-.|..-++.+.+.|.+|.++|++++..+ .++... ..+++. -..+.+.+.+.++++|+||..
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~--~l~~~~--~~~~~~---~~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS--YLETLF--GSRVEL---LYSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH--GGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHH--HHHHhh--ccccee---ehhhhhhHHHhhccCcEEEEe
Confidence 3457899987 45999999999999999999999875432 122221 122222 245677889999999999988
Q ss_pred cc
Q 026852 87 AS 88 (232)
Q Consensus 87 Ag 88 (232)
|-
T Consensus 103 al 104 (168)
T d1pjca1 103 VL 104 (168)
T ss_dssp CC
T ss_pred ee
Confidence 84
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=95.55 E-value=0.0019 Score=46.41 Aligned_cols=118 Identities=16% Similarity=0.090 Sum_probs=66.7
Q ss_pred CcEEEEECCCChhHHH--HHHHHHHC----CCeEEEEEcCCCCcchhhh--hh-hcCCCCceEEEEcCCCCcchHHHhhc
Q 026852 8 EKVVCVTGASGFVASW--LVKLLLQR----GYTVKATVRDPNSPKTEHL--RE-LDGATERLHLFKANLLEEGSFDSAVD 78 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~--~~~~l~~~----g~~V~~~~r~~~~~~~~~~--~~-~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (232)
.+||-|.|| |.+|+. ++..++.. +.+++++|+++++.+.... .. ......+. .+....+..++++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~-----~i~~~td~~eaL~ 75 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADL-----KFEKTMNLDDVII 75 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCC-----EEEEESCHHHHHT
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCe-----EEEEeCChhhccc
Confidence 368999997 657754 45556644 3589999999865432111 11 11111112 2223345667889
Q ss_pred CCCEEEEccccccc--------------C---CCCchhh--------hhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 79 GCDGVFHTASPVIF--------------L---SDNPQAD--------IVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 79 ~~d~vi~~Ag~~~~--------------~---~~~~~~~--------~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
++|+|++.++...- . ..+...+ ...-|+.-...+++...++....-++++|-.
T Consensus 76 dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~TNP 153 (171)
T d1obba1 76 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANP 153 (171)
T ss_dssp TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSC
T ss_pred CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEECCh
Confidence 99999999863110 0 0000001 1234777788888888887555556665554
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.50 E-value=0.017 Score=41.75 Aligned_cols=65 Identities=15% Similarity=0.066 Sum_probs=47.8
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.++++.|. |.|.||..+++.+..-|++|+..++....... . . ...++++++++.+|+|+
T Consensus 41 ~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------~-~-------~~~~~l~ell~~sDii~ 101 (188)
T d1sc6a1 41 EARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPLG----------N-A-------TQVQHLSDLLNMSDVVS 101 (188)
T ss_dssp CSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT----------T-C-------EECSCHHHHHHHCSEEE
T ss_pred cccceEEEEe-ecccchhhhhhhcccccceEeeccccccchhh----------h-h-------hhhhhHHHHHhhcccee
Confidence 3678888888 56779999999999999999999886543211 0 0 11246778888899988
Q ss_pred Eccc
Q 026852 85 HTAS 88 (232)
Q Consensus 85 ~~Ag 88 (232)
.++.
T Consensus 102 i~~p 105 (188)
T d1sc6a1 102 LHVP 105 (188)
T ss_dssp ECCC
T ss_pred eccc
Confidence 7763
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.48 E-value=0.013 Score=39.17 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=30.5
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++++|.|| |++|.+++..|.++|.+|+++.|++.
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence 467777765 78999999999999999999999875
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.42 E-value=0.06 Score=34.25 Aligned_cols=72 Identities=17% Similarity=0.305 Sum_probs=45.5
Q ss_pred CCCCcEEEEECCCChhH-HHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 5 EGEEKVVCVTGASGFVA-SWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG-~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
+-+.|++.+.|-+| +| +++|+.|.++|++|.+.|+...... +.+.+ . .+.+...+- + +.++++|.|
T Consensus 5 ~~~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~~~-~~L~~---~--Gi~v~~g~~--~----~~i~~~d~v 71 (96)
T d1p3da1 5 MRRVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGVVT-QRLAQ---A--GAKIYIGHA--E----EHIEGASVV 71 (96)
T ss_dssp CTTCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSHHH-HHHHH---T--TCEEEESCC--G----GGGTTCSEE
T ss_pred chhCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCChhh-hHHHH---C--CCeEEECCc--c----ccCCCCCEE
Confidence 34557888888765 55 6679999999999999999864322 22222 1 233333222 1 223578988
Q ss_pred EEcccc
Q 026852 84 FHTASP 89 (232)
Q Consensus 84 i~~Ag~ 89 (232)
|...+.
T Consensus 72 V~S~AI 77 (96)
T d1p3da1 72 VVSSAI 77 (96)
T ss_dssp EECTTS
T ss_pred EECCCc
Confidence 877653
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.39 E-value=0.0046 Score=44.85 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=32.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
|+|.|.|| |-||+.++..+++.|++|++.+++++.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG 39 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 57999999 889999999999999999999998754
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.37 E-value=0.023 Score=39.95 Aligned_cols=69 Identities=20% Similarity=0.122 Sum_probs=50.6
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++.+|+++|.| -|-+|+.+++.|...|.+|+++.++|-+ +++.. .|-.+...++++++..|++
T Consensus 19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~----alqA~-----------mdGf~v~~~~~a~~~aDi~ 82 (163)
T d1v8ba1 19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC----AIQAV-----------MEGFNVVTLDEIVDKGDFF 82 (163)
T ss_dssp CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH----HHHHH-----------TTTCEECCHHHHTTTCSEE
T ss_pred ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh----hHHHH-----------hcCCccCchhHccccCcEE
Confidence 457889988887 6779999999999999999999988842 23222 1222334566777888888
Q ss_pred EEccc
Q 026852 84 FHTAS 88 (232)
Q Consensus 84 i~~Ag 88 (232)
|-..|
T Consensus 83 vTaTG 87 (163)
T d1v8ba1 83 ITCTG 87 (163)
T ss_dssp EECCS
T ss_pred EEcCC
Confidence 87665
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.35 E-value=0.02 Score=41.60 Aligned_cols=68 Identities=16% Similarity=0.050 Sum_probs=48.7
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.+.++++.|.|. |.||+.+++.+...|++|+..++......... .. .....+++.++++.+|+|+
T Consensus 44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--~~------------~~~~~~~l~~ll~~sD~v~ 108 (191)
T d1gdha1 44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA--SY------------QATFHDSLDSLLSVSQFFS 108 (191)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH--HH------------TCEECSSHHHHHHHCSEEE
T ss_pred eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh--cc------------cccccCCHHHHHhhCCeEE
Confidence 467899999886 55999999999999999999988765332111 10 1123456788888999887
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
...
T Consensus 109 l~~ 111 (191)
T d1gdha1 109 LNA 111 (191)
T ss_dssp ECC
T ss_pred ecC
Confidence 665
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.31 E-value=0.0095 Score=41.58 Aligned_cols=64 Identities=20% Similarity=0.080 Sum_probs=43.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+|.+. |.|-+|+++++.|++.|++|++.+|++++.. +..+++.. .-..+.+++++++|+||-+.
T Consensus 2 kIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~-~l~~~~g~------------~~~~~~~~~~~~~dvIilav 65 (152)
T d2ahra2 2 KIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSK-EIAEQLAL------------PYAMSHQDLIDQVDLVILGI 65 (152)
T ss_dssp EEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHH-HHHHHHTC------------CBCSSHHHHHHTCSEEEECS
T ss_pred EEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHH-hhccccce------------eeechhhhhhhccceeeeec
Confidence 45555 5677999999999999999999999875432 11122211 11234566678899998664
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.30 E-value=0.0068 Score=42.52 Aligned_cols=25 Identities=32% Similarity=0.478 Sum_probs=22.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY 33 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~ 33 (232)
=+|.|.||||+.|.++++.|.++.+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC
Confidence 4799999999999999999988865
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.17 E-value=0.018 Score=38.06 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=30.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++++|.|| |.+|.+++..|.+.|.+|+++.|.+.
T Consensus 23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 67888875 78999999999999999999998875
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.012 Score=41.55 Aligned_cols=74 Identities=24% Similarity=0.295 Sum_probs=42.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC-CCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
..+|.|.|++|.+|+.+++.+.+. ++++++. +|......-+-..++..... .++.-.+.....++.+|+||-
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~------~~~~~~~~~~~~~~~~DViID 77 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGK------TGVTVQSSLDAVKDDFDVFID 77 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSC------CSCCEESCSTTTTTSCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhcccc------CCceeeccHHHHhcccceEEE
Confidence 368999999999999999999887 6676544 44332211111111111111 112222233456678899997
Q ss_pred cc
Q 026852 86 TA 87 (232)
Q Consensus 86 ~A 87 (232)
+.
T Consensus 78 Fs 79 (162)
T d1diha1 78 FT 79 (162)
T ss_dssp CS
T ss_pred ec
Confidence 64
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.08 E-value=0.034 Score=39.86 Aligned_cols=72 Identities=17% Similarity=0.102 Sum_probs=49.9
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEc----------------------C
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKA----------------------N 66 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------------------D 66 (232)
-+++|.||+ -.|..-++.....|++|.++|.++...+ .++++.. .++.. -
T Consensus 30 a~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~--~l~~l~~-----~~i~~~~~~~~~~~~~~gyA~~~s~~~~ 101 (183)
T d1l7da1 30 ARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKE--QVESLGG-----KFITVDDEAMKTAETAGGYAKEMGEEFR 101 (183)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHH--HHHHTTC-----EECCC-----------------------
T ss_pred cEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHH--HHHHhhc-----ceEEEeccccccccccccchhhcCHHHH
Confidence 478888874 5999999999999999999999987653 2333211 11111 1
Q ss_pred CCCcchHHHhhcCCCEEEEccc
Q 026852 67 LLEEGSFDSAVDGCDGVFHTAS 88 (232)
Q Consensus 67 ~~~~~~~~~~~~~~d~vi~~Ag 88 (232)
..+.+.+.+.++++|+||-.|-
T Consensus 102 ~~~~~~l~~~l~~aDlVI~tal 123 (183)
T d1l7da1 102 KKQAEAVLKELVKTDIAITTAL 123 (183)
T ss_dssp CCHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHhhhhheeeee
Confidence 1234566777889999998873
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.03 E-value=0.018 Score=38.54 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=30.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+++|.|| |.||.+++..|.+.|.+|.++.|++.
T Consensus 24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence 67888875 78999999999999999999998775
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.01 E-value=0.022 Score=39.54 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=29.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
..++|-.++|+||.+++..|+++|++|+++.+.+.
T Consensus 41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 34444457799999999999999999999998764
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.94 E-value=0.03 Score=39.55 Aligned_cols=77 Identities=17% Similarity=0.092 Sum_probs=46.2
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCC--cchHHHhh--cCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAV--DGC 80 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~--~~~ 80 (232)
-++.+|+|.|+ |++|...+..+...|. +|+++++++++. +...++- ..+.+..+-.+ .+.+.... .++
T Consensus 27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl--~~a~~~G----Ad~~in~~~~~~~~~~~~~~~~~~G~ 99 (175)
T d1cdoa2 27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF--EKAKVFG----ATDFVNPNDHSEPISQVLSKMTNGGV 99 (175)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHTT----CCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH--HHHHHcC----CcEEEcCCCcchhHHHHHHhhccCCc
Confidence 35678999986 5677777777777765 688888887654 2333332 22343222111 12333332 268
Q ss_pred CEEEEcccc
Q 026852 81 DGVFHTASP 89 (232)
Q Consensus 81 d~vi~~Ag~ 89 (232)
|++|.+.|.
T Consensus 100 d~vid~~G~ 108 (175)
T d1cdoa2 100 DFSLECVGN 108 (175)
T ss_dssp SEEEECSCC
T ss_pred ceeeeecCC
Confidence 999999863
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.93 E-value=0.033 Score=36.90 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=30.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++++|.|| |.||.+++..|.+.|++|.++.|++.
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 367888875 78999999999999999999998764
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.92 E-value=0.025 Score=37.83 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=30.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+.|+++|.| +|++|.+++..|.+.|.+|+++.|.+.
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence 356777775 579999999999999999999988764
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.73 E-value=0.021 Score=38.65 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=26.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEE
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKAT 38 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~ 38 (232)
++|.|.|++|.+|+.+.+.+.+.|+++++.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 479999999999999999999989887654
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.69 E-value=0.029 Score=36.93 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=29.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++++|.| +|++|.+++..|.+.|++|+++.|.+.
T Consensus 22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence 5666665 689999999999999999999988764
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.66 E-value=0.025 Score=37.37 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=29.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++++|.| +|.+|.+++..|.+.|.+|.++.|.+.
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence 5677766 578999999999999999999999864
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.63 E-value=0.022 Score=37.77 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=30.2
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++++|.|| |.+|.+++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 367877775 78999999999999999999998764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.56 E-value=0.023 Score=42.43 Aligned_cols=40 Identities=33% Similarity=0.228 Sum_probs=34.1
Q ss_pred CCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 3 ~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+.++++++++|-|- |-+|+++++.|.+.|++|++.+.++.
T Consensus 34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~ 73 (230)
T d1leha1 34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKA 73 (230)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHH
Confidence 45689999999886 55999999999999999998877653
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.49 E-value=0.022 Score=40.57 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=29.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~ 45 (232)
+|-|. |.|-+|..+++.|++.|++|++.+|++++.
T Consensus 3 kIGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~ 37 (178)
T d1pgja2 3 DVGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKS 37 (178)
T ss_dssp SEEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred EEEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 45555 578899999999999999999999988654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.47 E-value=0.11 Score=32.55 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=41.4
Q ss_pred cEEEEECCCChhHH-HHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEE-cCCCCcchHHHhhcCCCEEEEc
Q 026852 9 KVVCVTGASGFVAS-WLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK-ANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 9 ~~ilItGa~g~iG~-~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++|.+.|-+| +|. ++|+.|.++|++|.+.|+++... .+.+++. + +.++. -|.. .++++|.||..
T Consensus 2 ~~ihfiGIgG-~GMs~LA~~L~~~G~~VsGSD~~~~~~-t~~L~~~---G--i~i~~gh~~~-------~i~~~d~vV~S 67 (89)
T d1j6ua1 2 MKIHFVGIGG-IGMSAVALHEFSNGNDVYGSNIEETER-TAYLRKL---G--IPIFVPHSAD-------NWYDPDLVIKT 67 (89)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHT---T--CCEESSCCTT-------SCCCCSEEEEC
T ss_pred cEEEEEeECH-HHHHHHHHHHHhCCCeEEEEeCCCChh-HHHHHHC---C--CeEEeeeccc-------ccCCCCEEEEe
Confidence 4576776544 664 78999999999999999886422 2333332 2 22222 2221 23568999887
Q ss_pred ccc
Q 026852 87 ASP 89 (232)
Q Consensus 87 Ag~ 89 (232)
.+.
T Consensus 68 sAI 70 (89)
T d1j6ua1 68 PAV 70 (89)
T ss_dssp TTC
T ss_pred cCc
Confidence 664
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.44 E-value=0.03 Score=37.46 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.3
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+++|.|| |+||.+++..|.+.|.+|+++.|++.
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 67888886 57999999999999999999999864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.43 E-value=0.037 Score=36.85 Aligned_cols=33 Identities=30% Similarity=0.279 Sum_probs=28.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
++++|.|| |.||.+++..|.+.|.+|.++.|++
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~ 53 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI 53 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence 46777765 7899999999999999999998864
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.31 E-value=0.062 Score=37.20 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=29.7
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~ 42 (232)
.|+|.|.|+||-||..+..-+.+. .++|++++-+.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 489999999999999999988776 58888876554
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=94.29 E-value=0.021 Score=42.82 Aligned_cols=35 Identities=29% Similarity=0.295 Sum_probs=29.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHH-CCCeEEEEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATV 39 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~-~g~~V~~~~ 39 (232)
.++++++++|-| .|-+|++++++|.+ .|.+|+.++
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 468899999987 78899999999975 599998776
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.27 E-value=0.09 Score=35.18 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=51.7
Q ss_pred CCCCCcEEEEECCCC----------hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchH
Q 026852 4 GEGEEKVVCVTGASG----------FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSF 73 (232)
Q Consensus 4 ~~~~~~~ilItGa~g----------~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (232)
..-+.|+|||.|++. ..+.+.+++|.+.|++++++.-|+..-..+. ...+++-| .-...+.+
T Consensus 3 ~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-----d~aD~lYf---ePlt~e~v 74 (127)
T d1a9xa3 3 KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-----EMADATYI---EPIHWEVV 74 (127)
T ss_dssp CCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-----GGSSEEEC---SCCCHHHH
T ss_pred CCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-----hhcceeee---ecCCHHHH
Confidence 334558999999954 4678899999999999999999887543210 11233333 33345666
Q ss_pred HHhhc--CCCEEEEccc
Q 026852 74 DSAVD--GCDGVFHTAS 88 (232)
Q Consensus 74 ~~~~~--~~d~vi~~Ag 88 (232)
.+.++ ++|.|+-..|
T Consensus 75 ~~Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 75 RKIIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHHHCCSEEECSSS
T ss_pred HHHHHHhCcCCeEEEee
Confidence 66654 7899986654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.24 E-value=0.022 Score=38.04 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=30.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
++++|.|| |.||.+++..|.+.|.+|+++.|++..
T Consensus 26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 57777775 789999999999999999999988753
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.24 E-value=0.049 Score=35.89 Aligned_cols=37 Identities=19% Similarity=0.076 Sum_probs=31.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++++++|.|| |.+|.+++..|.+.|.+|.++.|.+.
T Consensus 20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 34677877764 78999999999999999999998764
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.21 E-value=0.086 Score=40.87 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=50.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
+++++||-.|++.|+ ++..++++|. +|++++.++.-..............++.++.+|+.+...- -+.+|+|+
T Consensus 34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~---~~~~D~Iv 107 (311)
T d2fyta1 34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLP---VEKVDVII 107 (311)
T ss_dssp TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---CSCEEEEE
T ss_pred CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCc---cccceEEE
Confidence 578999999999875 5667778885 7999988763211111112223357899999999875421 24679888
Q ss_pred Ec
Q 026852 85 HT 86 (232)
Q Consensus 85 ~~ 86 (232)
..
T Consensus 108 se 109 (311)
T d2fyta1 108 SE 109 (311)
T ss_dssp EC
T ss_pred Ee
Confidence 64
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.18 E-value=0.029 Score=39.98 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=30.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS 44 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~ 44 (232)
+|+|+|.|| |..|...+.+|.++|+ +|+++.|++..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV 40 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence 478888886 7899999999999998 49999988753
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.14 E-value=0.022 Score=42.55 Aligned_cols=73 Identities=16% Similarity=0.093 Sum_probs=49.3
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+.++||=.|++.| .++..|+++|++|++++.+++-.+ .+.+..+....++.++++|+.+... -+.+|.|+..
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~-~a~~~~~~~~~~i~~~~~d~~~l~~----~~~fD~I~~~ 112 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLR-VARRKAKERNLKIEFLQGDVLEIAF----KNEFDAVTMF 112 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCCEEEESCGGGCCC----CSCEEEEEEC
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccc-ccccccccccccchheehhhhhccc----ccccchHhhh
Confidence 4568999999886 456678899999999988874221 1222222234478999999976531 1357888865
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
-
T Consensus 113 ~ 113 (251)
T d1wzna1 113 F 113 (251)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.03 E-value=0.15 Score=34.53 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=42.0
Q ss_pred EEEEECCCChhHHHHHHHHHHC-CCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhc-----CCCE
Q 026852 10 VVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCDG 82 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~ 82 (232)
+|.|.|++|.+|+.+++.+.+. ++++.+. ++... . . .......+ +-.|.+.++.+.+.++ ++-.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~--~---~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~~~~~ 71 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-L--S---LLTDGNTE---VVIDFTHPDVVMGNLEFLIDNGIHA 71 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-T--H---HHHTTTCS---EEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-h--h---hhccccCC---EEEEcccHHHHHHHHHHHHhcCCCE
Confidence 5899999999999999998876 6776643 33321 1 1 11111111 3368888888777664 4455
Q ss_pred EE
Q 026852 83 VF 84 (232)
Q Consensus 83 vi 84 (232)
|+
T Consensus 72 Vi 73 (135)
T d1yl7a1 72 VV 73 (135)
T ss_dssp EE
T ss_pred EE
Confidence 55
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=93.98 E-value=0.047 Score=40.92 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=48.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------chhhh-hhhc--CCCCceEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEHL-RELD--GATERLHLFK 64 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~-----------------~~~~~-~~~~--~~~~~~~~~~ 64 (232)
+++.+|+|.| .||+|++++..|++.|. +++++|.+.-.. ..+.+ +.+. ....+++.+.
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~ 106 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 106 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence 4567899999 56699999999999997 677776432111 01111 1122 2223344443
Q ss_pred cCCCCcchHHHhhcCCCEEEEcc
Q 026852 65 ANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 65 ~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
..+ +.+.....++..|++|.+.
T Consensus 107 ~~~-~~~~~~~~~~~~divid~~ 128 (247)
T d1jw9b_ 107 ALL-DDAELAALIAEHDLVLDCT 128 (247)
T ss_dssp SCC-CHHHHHHHHHTSSEEEECC
T ss_pred hhh-hhccccccccccceeeecc
Confidence 333 3445566677889998664
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.96 E-value=0.085 Score=40.69 Aligned_cols=27 Identities=26% Similarity=0.239 Sum_probs=23.9
Q ss_pred CChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 17 SGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 17 ~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
||.+|.+++++|+.+|++|+++.+..+
T Consensus 45 SGk~G~alA~~~~~~Ga~V~li~g~~s 71 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYGVLFLYRARS 71 (290)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred chHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 688999999999999999999976543
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=93.90 E-value=0.045 Score=39.15 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=32.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.+.|+|+|.|| |..|.+.+..|.++|++|+++.+++.
T Consensus 41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 45688999986 68999999999999999999998764
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=93.71 E-value=0.07 Score=37.56 Aligned_cols=63 Identities=17% Similarity=0.265 Sum_probs=39.3
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC-CCeEEEE-EcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
..++.|.|. |.+|+..++.+.+. +++++++ +|+++.... ..+ . ...+...+.+++|+|+.
T Consensus 3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~----------~~~--~-----~~~~~~~~~~~~D~Vvi 64 (170)
T d1f06a1 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK----------TPV--F-----DVADVDKHADDVDVLFL 64 (170)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS----------SCE--E-----EGGGGGGTTTTCSEEEE
T ss_pred cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccccccc----------ccc--c-----cchhhhhhccccceEEE
Confidence 357888885 89999999999876 6776654 455432211 111 1 12233445567898887
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
+..
T Consensus 65 ~tp 67 (170)
T d1f06a1 65 CMG 67 (170)
T ss_dssp CSC
T ss_pred eCC
Confidence 764
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=93.71 E-value=0.021 Score=39.58 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=29.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEEEcCCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNS 44 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~~r~~~~ 44 (232)
|+|.+.|+ |-+|.++++.|++.| ++|++.+|++++
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~ 36 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK 36 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence 46777777 889999999999887 899999999754
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=93.59 E-value=0.066 Score=35.76 Aligned_cols=35 Identities=9% Similarity=0.083 Sum_probs=30.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++++|.|| |.||.+++..|.+.|.+|+++.|.+.
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 467888875 78999999999999999999988764
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.48 E-value=0.26 Score=32.47 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=49.6
Q ss_pred CCcEEEEECCCC----------hhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh
Q 026852 7 EEKVVCVTGASG----------FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA 76 (232)
Q Consensus 7 ~~~~ilItGa~g----------~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (232)
..|+|||.|++. ..+.+.+++|.+.|++++++.-||+.-..+ ....+++-|.+. ..+.+.+.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd-----~d~aD~lYfepl---t~e~v~~I 74 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD-----YDTSDRLYFEPV---TLEDVLEI 74 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS-----TTSSSEEECCCC---SHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC-----hhhcCceEEccC---CHHHHHHH
Confidence 457899999965 567899999999999999999888654321 011233333233 45566665
Q ss_pred h--cCCCEEEEccc
Q 026852 77 V--DGCDGVFHTAS 88 (232)
Q Consensus 77 ~--~~~d~vi~~Ag 88 (232)
+ +++|.|+-..|
T Consensus 75 i~~E~p~~ii~~~G 88 (121)
T d1a9xa4 75 VRIEKPKGVIVQYG 88 (121)
T ss_dssp HHHHCCSEEECSSS
T ss_pred HHHhCCCEEEeehh
Confidence 4 37898886554
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.45 E-value=0.18 Score=39.15 Aligned_cols=75 Identities=16% Similarity=0.103 Sum_probs=48.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++++||-.|++.|+ +...++++|. +|++++.++.-.............+++.++++|+.+.+.- -+.+|+|+
T Consensus 32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~---~~~~D~iv 105 (316)
T d1oria_ 32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP---VEKVDIII 105 (316)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SSCEEEEE
T ss_pred CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcccc---cceeEEEe
Confidence 368899999998875 4567778885 7999987653211111112223357799999999875421 23578887
Q ss_pred Ec
Q 026852 85 HT 86 (232)
Q Consensus 85 ~~ 86 (232)
..
T Consensus 106 s~ 107 (316)
T d1oria_ 106 SE 107 (316)
T ss_dssp EC
T ss_pred ee
Confidence 64
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.39 E-value=0.034 Score=41.88 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++|+|.|| |.-|...+.+|.++|++|+++.+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 35899998 88999999999999999999988654
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.35 E-value=0.067 Score=36.10 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=31.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+.++++|.| +|++|.+++..|.+.|.+|.++.+++.
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence 357788885 589999999999999999999998765
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.30 E-value=0.053 Score=42.24 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=31.2
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++|+|+|.|| |.-|..+|..|.+.|++|.++.++..
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 3588999886 67999999999999999999988764
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.01 E-value=0.018 Score=43.20 Aligned_cols=75 Identities=8% Similarity=-0.182 Sum_probs=51.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.++++||=.|++.|. ++..|+++|.+|++++.++.-.. .+.+.......++.++.+|+++.+. -+.+|+|+.
T Consensus 36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~-~A~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~i~~ 107 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLS-EAENKFRSQGLKPRLACQDISNLNI----NRKFDLITC 107 (246)
T ss_dssp CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHH-HHHHHHHHTTCCCEEECCCGGGCCC----SCCEEEEEE
T ss_pred CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhh-hccccccccCccceeeccchhhhcc----cccccccce
Confidence 345789999999885 77788899999999988874221 1122222334578999999986642 245799986
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
..+
T Consensus 108 ~~~ 110 (246)
T d1y8ca_ 108 CLD 110 (246)
T ss_dssp CTT
T ss_pred eee
Confidence 543
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=92.88 E-value=0.035 Score=40.28 Aligned_cols=31 Identities=26% Similarity=0.229 Sum_probs=26.9
Q ss_pred cEEEEECCCChhHHH-----HHHHHHHCCCeEEEEE
Q 026852 9 KVVCVTGASGFVASW-----LVKLLLQRGYTVKATV 39 (232)
Q Consensus 9 ~~ilItGa~g~iG~~-----~~~~l~~~g~~V~~~~ 39 (232)
|+++|||.+.|+|+. +++.|.++|++|.+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 789999999999965 5578889999999886
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=92.83 E-value=0.056 Score=38.34 Aligned_cols=74 Identities=14% Similarity=0.131 Sum_probs=47.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-------------CCCCceEEEEcCCCCcchH
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-------------GATERLHLFKANLLEEGSF 73 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~~D~~~~~~~ 73 (232)
++.+||..|++.| ..+..|+++|++|++++.++..... +.+... .......++++|..+....
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 95 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVER-YFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 95 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHH-HHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHH-HHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence 5679999999887 4677899999999999988753221 111111 1134457888888765542
Q ss_pred HHhhcCCCEEEEc
Q 026852 74 DSAVDGCDGVFHT 86 (232)
Q Consensus 74 ~~~~~~~d~vi~~ 86 (232)
.. ..+|.|+..
T Consensus 96 ~~--~~~D~i~~~ 106 (201)
T d1pjza_ 96 DI--GHCAAFYDR 106 (201)
T ss_dssp HH--HSEEEEEEE
T ss_pred cc--cceeEEEEE
Confidence 22 235766644
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.82 E-value=0.073 Score=38.61 Aligned_cols=69 Identities=17% Similarity=0.142 Sum_probs=47.5
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
+.+.|++||=.|++.|+ ++..++..|. +|++++.++.. ++.......++.++.+|+.+.+ .++|.
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a-----~~~ar~N~~~~~~~~~D~~~l~------~~fD~ 110 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDA-----IETAKRNCGGVNFMVADVSEIS------GKYDT 110 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHH-----HHHHHHHCTTSEEEECCGGGCC------CCEEE
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHH-----HHHHHHccccccEEEEehhhcC------CcceE
Confidence 45789999999998873 3345666775 69999987642 2222222346789999986543 36899
Q ss_pred EEEc
Q 026852 83 VFHT 86 (232)
Q Consensus 83 vi~~ 86 (232)
||-|
T Consensus 111 Vi~N 114 (197)
T d1ne2a_ 111 WIMN 114 (197)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9977
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=92.18 E-value=0.1 Score=38.72 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.1
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++|+|.|| |.-|..++..|+++|++|+++.|++.
T Consensus 5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 67888886 67999999999999999999998764
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=91.80 E-value=0.092 Score=39.36 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=29.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+|+|+|.|| |.-|...+.+|.++|++|+++.+++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 478888865 67899999999999999999987653
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=91.72 E-value=0.12 Score=39.11 Aligned_cols=35 Identities=26% Similarity=0.114 Sum_probs=31.3
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV 39 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~ 39 (232)
..+++++++|.| .|-+|+++++.|.+.|++|+.++
T Consensus 32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 468899999999 58899999999999999998775
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=91.65 E-value=0.024 Score=36.91 Aligned_cols=37 Identities=19% Similarity=-0.066 Sum_probs=30.7
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++||+|+|.|++ --|..++.+|+....+|+...|...
T Consensus 30 f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 30 FVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred cCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence 688999999986 6888999999988888777777654
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.53 E-value=0.11 Score=35.92 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=28.6
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCC--eEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~--~V~~~~r~~ 42 (232)
||+|+|.|| |.+|..++.+|.+.+. +|+++.+++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999987 5799999999999875 678877665
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=91.50 E-value=0.078 Score=38.10 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=26.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|.|.| .|++|..++..| +.|++|+++|.+++
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~ 33 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS 33 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence 4677776 899999998655 57999999998764
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.48 E-value=0.094 Score=34.68 Aligned_cols=34 Identities=29% Similarity=0.393 Sum_probs=29.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++++|.| +|++|.+++..|.+.|++|+++.|++.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 5666665 589999999999999999999998765
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.41 E-value=0.14 Score=37.68 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=32.0
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
-..|+|+|.|| |..|...+.+|.++|++|+++.+++.
T Consensus 47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 35578999986 67999999999999999999988765
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=91.37 E-value=0.15 Score=38.10 Aligned_cols=35 Identities=34% Similarity=0.431 Sum_probs=31.0
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV 39 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~ 39 (232)
..+++++|+|-| -|-+|+++++.|.+.|++|+.++
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 358899999997 67899999999999999998766
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=91.32 E-value=0.13 Score=39.72 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=23.1
Q ss_pred cEEEEECCCCh-h---HHHHHHHHHHCCCeEEEEEcC
Q 026852 9 KVVCVTGASGF-V---ASWLVKLLLQRGYTVKATVRD 41 (232)
Q Consensus 9 ~~ilItGa~g~-i---G~~~~~~l~~~g~~V~~~~r~ 41 (232)
|+|+|++|+.| - ..+++++|.++|++|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 46666665433 3 346889999999999877644
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.07 E-value=0.12 Score=37.38 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=28.6
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|.| +|.-|..+|.+|+++|++|.++.+++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 78887 688999999999999999999998764
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=91.06 E-value=0.25 Score=34.36 Aligned_cols=73 Identities=18% Similarity=0.108 Sum_probs=42.0
Q ss_pred cEEEEECCCChhHHHHHH-HHHHC-----CCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 9 KVVCVTGASGFVASWLVK-LLLQR-----GYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~-~l~~~-----g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+||.|.||++ +|...+- .+++. ..++.++|.++++... +..........++. ++ .+..+.++++
T Consensus 1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-----~t--~~~~~~l~~a 72 (162)
T d1up7a1 1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-----IS--DTFEGAVVDA 72 (162)
T ss_dssp CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-----EC--SSHHHHHTTC
T ss_pred CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE-----Ee--cCcccccCCC
Confidence 4789999865 6655553 33322 3579999998865432 11111112122211 11 2345778899
Q ss_pred CEEEEcccc
Q 026852 81 DGVFHTASP 89 (232)
Q Consensus 81 d~vi~~Ag~ 89 (232)
|+||..||.
T Consensus 73 DvVVita~~ 81 (162)
T d1up7a1 73 KYVIFQFRP 81 (162)
T ss_dssp SEEEECCCT
T ss_pred CEEEEeccc
Confidence 999999984
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=90.98 E-value=0.19 Score=34.91 Aligned_cols=36 Identities=25% Similarity=0.219 Sum_probs=23.9
Q ss_pred CcEEEEECCCChhHHHHHHHHHH-C-CCeEEEE-EcCCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQ-R-GYTVKAT-VRDPNS 44 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~-~-g~~V~~~-~r~~~~ 44 (232)
..++-|.| +|+||..+...+++ . ..+++++ +|+++.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~ 42 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhc
Confidence 35799999 89999976544444 4 3466554 566653
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=90.57 E-value=0.3 Score=37.93 Aligned_cols=117 Identities=12% Similarity=-0.043 Sum_probs=63.1
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcch-HHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGS-FDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~-~~~~~~~~d~v 83 (232)
.++++||=.+++.| |.++ ++++.+.+|+.++.++..... +.+... ..-.+++++++|..+... +...-+.+|.|
T Consensus 144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~-a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~V 219 (318)
T d1wxxa2 144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRR-AEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV 219 (318)
T ss_dssp CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHH-HHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHH-HHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence 46777776666554 3332 344457789999999754321 112221 222568899999875433 22223468999
Q ss_pred EEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 84 FHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 84 i~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
|.....+. .... ....-......+++.+.+....+-++..+|+
T Consensus 220 i~DpP~~~-~~~~----~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc 262 (318)
T d1wxxa2 220 VLDPPAFA-KGKK----DVERAYRAYKEVNLRAIKLLKEGGILATASC 262 (318)
T ss_dssp EECCCCSC-CSTT----SHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEcCCccc-cchH----HHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 98863222 1111 1222334445566666665444445555555
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=90.27 E-value=0.23 Score=34.17 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=29.3
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~ 42 (232)
+|+|.|.|+||-||..+..-+.+. .++|+++.-+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 378999999999999999988887 47888876544
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.17 E-value=0.23 Score=34.57 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=27.4
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+++|+|.|| |.+|.+++..|.+.|.+|.++.+.+.
T Consensus 3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence 456777664 78999999999999998777665543
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=90.02 E-value=0.15 Score=38.73 Aligned_cols=36 Identities=19% Similarity=0.174 Sum_probs=30.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
+.|+|+|.||+ -.|...+.+|.++|++|+++.+++.
T Consensus 29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 44789999875 6899999999999999999987654
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=89.85 E-value=0.11 Score=37.42 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=53.7
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHh--hcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA--VDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~vi~~A 87 (232)
.+=+|-|+||.-.++++.+ .+.+|+++|+++.... ...+.+.....++.+++.+.++...+..- .+.+|.|+--.
T Consensus 27 ~lD~t~G~Gghs~~il~~~--~~~~vi~~D~d~~~l~-~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~Dl 103 (192)
T d1m6ya2 27 ILDCTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLR-IAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 103 (192)
T ss_dssp EEETTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHH-HHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred EEEecCCCcHHHHHHHhcC--CCCeEEEeechHHHHH-HHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeecc
Confidence 3446777887777777765 3578999999985332 22223333357899999999887776555 35789998777
Q ss_pred ccc
Q 026852 88 SPV 90 (232)
Q Consensus 88 g~~ 90 (232)
|..
T Consensus 104 GvS 106 (192)
T d1m6ya2 104 GVS 106 (192)
T ss_dssp SCC
T ss_pred chh
Confidence 753
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.80 E-value=0.6 Score=36.12 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=48.3
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
.++++||-.|++.|+ ++..++++|+ +|++++.++.-..............++.+++.|+.+.+-- -+.+|+|+
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~---~~~~D~i~ 110 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLP---FPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---SSCEEEEE
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCc---ccceeEEE
Confidence 468899999998874 4566778886 7989887752101111112223357899999999765421 13578887
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
..-
T Consensus 111 se~ 113 (328)
T d1g6q1_ 111 SEW 113 (328)
T ss_dssp ECC
T ss_pred EEe
Confidence 653
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=89.71 E-value=0.17 Score=38.06 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=31.3
Q ss_pred CCcEEEEECCCChhHHHH-----HHHHHHCCCeEEEEEcCCCC
Q 026852 7 EEKVVCVTGASGFVASWL-----VKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~-----~~~l~~~g~~V~~~~r~~~~ 44 (232)
.+++|+|+.|=||+|+.+ +..|+++|++|.+++-++..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~ 60 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA 60 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 456788888899999876 57888999999999998753
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=89.52 E-value=0.2 Score=32.69 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=28.1
Q ss_pred CcEEEEECCCChhHHHHHHHHHHC---CCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQR---GYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~---g~~V~~~~r~~~ 43 (232)
.++++|.|| |++|.+++..|.+. |.+|+++.|.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 368899988 99999999776655 467999988764
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=89.44 E-value=0.27 Score=35.82 Aligned_cols=79 Identities=10% Similarity=-0.025 Sum_probs=50.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc-CCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++.+||-.|+++|--.+...++...+.+|+.++.+++.... +.+.+. ....++.++..|..+.-. .-..+|.|+.
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~-a~~~~~~~~~~n~~~~~~d~~~~~~---~~~~fD~I~~ 150 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEI-AKRNVERLGIENVIFVCGDGYYGVP---EFSPYDVIFV 150 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHH-HHHHHHHTTCCSEEEEESCGGGCCG---GGCCEEEEEE
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHH-hhhhHhhhcccccccccCchHHccc---cccchhhhhh
Confidence 56789999988887777666666667789999988753322 112222 224677888888753221 1234799988
Q ss_pred cccc
Q 026852 86 TASP 89 (232)
Q Consensus 86 ~Ag~ 89 (232)
+++.
T Consensus 151 ~~~~ 154 (213)
T d1dl5a1 151 TVGV 154 (213)
T ss_dssp CSBB
T ss_pred hccH
Confidence 7753
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.29 E-value=0.28 Score=35.45 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=41.6
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch----hhhhhhcCCCCceEEEE-cCCCCcchHHHhhc--CCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT----EHLRELDGATERLHLFK-ANLLEEGSFDSAVD--GCD 81 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~--~~d 81 (232)
|+|++.|. +..|..+.+.|.+.|++|.++.-.+++... ..+.++.. ..++.+++ -++.+.+.+ +.++ ++|
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~~~-~~i~~~~~D 77 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPLWV-ERIAQLSPD 77 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHHHH-HHHHHTCCS
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchhhh-hhhhhhccc
Confidence 35667755 558999999999999999776543332111 11111111 11244443 445554433 3333 679
Q ss_pred EEEEcc
Q 026852 82 GVFHTA 87 (232)
Q Consensus 82 ~vi~~A 87 (232)
++|...
T Consensus 78 lii~~g 83 (203)
T d2blna2 78 VIFSFY 83 (203)
T ss_dssp EEEEES
T ss_pred ceeeee
Confidence 887665
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.25 E-value=0.16 Score=38.41 Aligned_cols=32 Identities=25% Similarity=0.211 Sum_probs=29.4
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
+|+|.||+ -.|..++..|.+.|.+|.++.|++
T Consensus 4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 58999987 999999999999999999999876
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.11 E-value=0.16 Score=37.22 Aligned_cols=75 Identities=11% Similarity=0.134 Sum_probs=47.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhh------------------hcCCCCceEEEEcCCC
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE------------------LDGATERLHLFKANLL 68 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~------------------~~~~~~~~~~~~~D~~ 68 (232)
++.+||..|++.| ..+..|++.|++|++++-++..... ..++ ......++.++.+|+.
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 120 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQE-FFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF 120 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHH-HHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHH-HHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence 5678999999887 5688889999999999988742211 1110 0112357888888886
Q ss_pred CcchHHHhhcCCCEEEEcc
Q 026852 69 EEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 69 ~~~~~~~~~~~~d~vi~~A 87 (232)
+..... -..+|+|+-.+
T Consensus 121 ~l~~~~--~~~fd~i~~~~ 137 (229)
T d2bzga1 121 DLPRTN--IGKFDMIWDRG 137 (229)
T ss_dssp GGGGSC--CCCEEEEEESS
T ss_pred hccccc--cCceeEEEEEE
Confidence 554311 12357776554
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=89.07 E-value=0.17 Score=35.99 Aligned_cols=76 Identities=14% Similarity=0.203 Sum_probs=42.7
Q ss_pred EEEEECCCChhHHHHHHHHHHC-CCeEEEEE-cCCCCcchhhhhhhcCCCCceE--------EEEcCCCCcchHHHhhcC
Q 026852 10 VVCVTGASGFVASWLVKLLLQR-GYTVKATV-RDPNSPKTEHLRELDGATERLH--------LFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~--------~~~~D~~~~~~~~~~~~~ 79 (232)
+|.|-| .|.||+.+++.++++ +.+|+++. +++... ...+... ....+ +....+.-...+..+.++
T Consensus 3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~ 77 (178)
T d1b7go1 3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYE-AFIAHRR---GIRIYVPQQSIKKFEESGIPVAGTVEDLIKT 77 (178)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHH-HHHHHHT---TCCEECCGGGHHHHHTTTCCCCCCHHHHHHH
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHH-HHHhccc---CcceeccCccceeccccceecCCchhhhhhc
Confidence 688888 699999999999987 46776653 333211 1111110 01111 011112222345555668
Q ss_pred CCEEEEccccc
Q 026852 80 CDGVFHTASPV 90 (232)
Q Consensus 80 ~d~vi~~Ag~~ 90 (232)
+|+||-|.|.+
T Consensus 78 vDiViecTG~f 88 (178)
T d1b7go1 78 SDIVVDTTPNG 88 (178)
T ss_dssp CSEEEECCSTT
T ss_pred CCEEEECCCCc
Confidence 99999998753
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.92 E-value=0.16 Score=36.97 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=51.9
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
+|.+||=.|++.|.-...+..+...| +|++++.++.... . +.+......++.++..|..++......++.+|+++|.
T Consensus 56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~-~-a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~ 132 (209)
T d1nt2a_ 56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFE-K-LLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 132 (209)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHH-H-HHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHH-H-HHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence 56789999998885433333333334 8999998875332 1 1122222357999999999988877777778888775
Q ss_pred c
Q 026852 87 A 87 (232)
Q Consensus 87 A 87 (232)
.
T Consensus 133 ~ 133 (209)
T d1nt2a_ 133 I 133 (209)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.90 E-value=0.21 Score=36.30 Aligned_cols=37 Identities=22% Similarity=0.118 Sum_probs=30.6
Q ss_pred CcEEEEECCCChhHHH-----HHHHHHHCCCeEEEEEcCCCC
Q 026852 8 EKVVCVTGASGFVASW-----LVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~-----~~~~l~~~g~~V~~~~r~~~~ 44 (232)
.|+|.|+++-||.|.. ++..|+++|.+|.++|-++..
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~~ 42 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITM 42 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3799999999999964 456788889999999977654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=88.76 E-value=0.2 Score=37.41 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=27.4
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
|+|.|| |-+|..++.+|+++|++|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 777765 6799999999999999999999865
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.74 E-value=0.21 Score=36.01 Aligned_cols=73 Identities=11% Similarity=-0.025 Sum_probs=48.0
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEcc
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~A 87 (232)
+.+||=.|++.|. ++..|++.|++|++++.++.... .+.+.......++.++..|+.+...-. +.+|+|+...
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~-~ak~~~~~~~~~~~~~~~d~~~l~~~~---~~fD~I~~~~ 110 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIR-KAREYAKSRESNVEFIVGDARKLSFED---KTFDYVIFID 110 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCCEEEECCTTSCCSCT---TCEEEEEEES
T ss_pred CCEEEEECCCcch---hhhhHhhhhcccccccccccchh-hhhhhhccccccccccccccccccccC---cCceEEEEec
Confidence 3479999999886 66788899999999998864322 111222222356778888887653111 3468888664
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.60 E-value=0.29 Score=34.46 Aligned_cols=77 Identities=13% Similarity=0.147 Sum_probs=44.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEE-EcCCCCcchhhhhhhcCCCCceEE---------EEcCCCCcchHHHhh
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKAT-VRDPNSPKTEHLRELDGATERLHL---------FKANLLEEGSFDSAV 77 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~---------~~~D~~~~~~~~~~~ 77 (232)
.+|.|-|- |.||+.+++.+++++ .+|+.+ +.++.... ..+.... ..... ....+.....+..++
T Consensus 3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~-~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (172)
T d2czca2 3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEA-YRAKELG---IPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (172)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHH-HHHHHTT---CCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHH-HHhhhcC---ceeecccccceeeecccCccccchhhhhh
Confidence 57999996 889999999998874 565544 44433111 1111110 01111 011122233455566
Q ss_pred cCCCEEEEccccc
Q 026852 78 DGCDGVFHTASPV 90 (232)
Q Consensus 78 ~~~d~vi~~Ag~~ 90 (232)
+++|+||-|.|.+
T Consensus 78 ~~vDvViEcTG~f 90 (172)
T d2czca2 78 EKVDIIVDATPGG 90 (172)
T ss_dssp TTCSEEEECCSTT
T ss_pred ccCCEEEECCCCC
Confidence 7899999998864
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.38 E-value=0.29 Score=32.80 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=28.0
Q ss_pred CcEEEEECCCChhHHHHHHHHH----HCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLL----QRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~----~~g~~V~~~~r~~~ 43 (232)
.++++|.|| |++|.+++..|. +.|.+|+++.+++.
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 467888865 899999998886 35899999988664
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.36 E-value=0.56 Score=33.66 Aligned_cols=74 Identities=24% Similarity=0.178 Sum_probs=48.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCE
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 82 (232)
..++|++||=.|++.|. +..+++++|. +|++++.++.... ...+++.....+..++.+|+.+. -+++|.
T Consensus 43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~-~a~~N~~~~~~~~~~~~~d~~~~------~~~fD~ 112 (201)
T d1wy7a1 43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVD-VLIENLGEFKGKFKVFIGDVSEF------NSRVDI 112 (201)
T ss_dssp TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHH-HHHHHTGGGTTSEEEEESCGGGC------CCCCSE
T ss_pred CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHH-HHHHHHHHcCCCceEEECchhhh------CCcCcE
Confidence 34788899988887762 3334566775 8999999875332 22223333356778888887544 346899
Q ss_pred EEEcc
Q 026852 83 VFHTA 87 (232)
Q Consensus 83 vi~~A 87 (232)
||-|-
T Consensus 113 Vi~nP 117 (201)
T d1wy7a1 113 VIMNP 117 (201)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99775
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=88.19 E-value=0.3 Score=35.46 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=29.1
Q ss_pred CcEEEEECCCChhHHH-----HHHHHHHCCCeEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASW-----LVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~-----~~~~l~~~g~~V~~~~r~~ 42 (232)
+|+|.|+|+-||.|+. ++.+|++.|.+|.++|-+.
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~ 41 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3789999999999965 4567778899999998664
|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=88.08 E-value=0.21 Score=34.82 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=49.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhc----CCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD----GATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
+++|++|++.|-.+.+..+++..|...|.+|.++.-..-....+..+... .....+. -.+...++++++
T Consensus 1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~d~~ea~~~a 73 (163)
T d1pvva2 1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFE-------LLHDPVKAVKDA 73 (163)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE-------EESCHHHHTTTC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEE-------EecCHHHHhhhc
Confidence 37899999999999999999999999999988775443232222222111 0012222 234667788999
Q ss_pred CEEEEc
Q 026852 81 DGVFHT 86 (232)
Q Consensus 81 d~vi~~ 86 (232)
|+|+--
T Consensus 74 dviy~~ 79 (163)
T d1pvva2 74 DVIYTD 79 (163)
T ss_dssp SEEEEC
T ss_pred cEEeec
Confidence 988744
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=87.61 E-value=0.28 Score=37.20 Aligned_cols=32 Identities=25% Similarity=0.497 Sum_probs=27.4
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP 42 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~ 42 (232)
.|+|.||+ -+|..++.+|+++|+ +|++++|+.
T Consensus 3 dViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGAG-IVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 47888875 799999999999996 699998874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=87.26 E-value=0.55 Score=37.02 Aligned_cols=33 Identities=21% Similarity=0.121 Sum_probs=24.8
Q ss_pred cEEEEECC------CChhH---HHHHHHHHHCCCeEEEEEcC
Q 026852 9 KVVCVTGA------SGFVA---SWLVKLLLQRGYTVKATVRD 41 (232)
Q Consensus 9 ~~ilItGa------~g~iG---~~~~~~l~~~g~~V~~~~r~ 41 (232)
|+|++.+. +||+| .+++++|.++|++|.++...
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 35666554 57887 55689999999999988744
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=87.25 E-value=1.7 Score=34.54 Aligned_cols=87 Identities=13% Similarity=-0.015 Sum_probs=56.2
Q ss_pred CCCCCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhh---------hhcCCCCceEEEEcCCCCcch
Q 026852 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR---------ELDGATERLHLFKANLLEEGS 72 (232)
Q Consensus 2 ~~~~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~~~~~~D~~~~~~ 72 (232)
|+.-|+|-+||=.+ +..-|-...+.|+..|++|+-+-+........... -+.....+-.-+.+|+.+.+.
T Consensus 1 m~~PL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g 79 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEG 79 (417)
T ss_dssp CCCTTTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHH
T ss_pred CCCCCCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHH
Confidence 67778886665444 55678888899999999999987532111000000 011112344678899987665
Q ss_pred ---HHHhhcCCCEEEEcccc
Q 026852 73 ---FDSAVDGCDGVFHTASP 89 (232)
Q Consensus 73 ---~~~~~~~~d~vi~~Ag~ 89 (232)
+.++++++|+||+|--+
T Consensus 80 ~~~~~~Li~~aDv~i~n~~p 99 (417)
T d1q7ea_ 80 KEVMEKLIREADILVENFHP 99 (417)
T ss_dssp HHHHHHHHHHCSEEEECCCC
T ss_pred HHHHHHHHhcCcccEeccCC
Confidence 55678899999999643
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.76 E-value=0.43 Score=35.94 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=28.8
Q ss_pred CcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
.++|+|.|| |.-|...+.+|.++|++|.++-++.
T Consensus 5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 356888886 6799999999999999999987654
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=86.67 E-value=0.26 Score=36.90 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=29.2
Q ss_pred CcEEEEECCCChhHHHHH-----HHHHHCCCeEEEEEcCCC
Q 026852 8 EKVVCVTGASGFVASWLV-----KLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 8 ~~~ilItGa~g~iG~~~~-----~~l~~~g~~V~~~~r~~~ 43 (232)
+|+|.|+| =||+|+.++ ..|++.|++|.++|-++.
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 37888998 999997655 488888999999999875
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.42 E-value=0.68 Score=34.30 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=29.8
Q ss_pred CCCCCcEEEEECCCChhHHHHHHHHHHC-CCeEEEEEc
Q 026852 4 GEGEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVR 40 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r 40 (232)
..+++++|+|.|- |-+|+++++.|.+. |..|+.++-
T Consensus 28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence 3588999999998 56999999999875 888877653
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.20 E-value=0.49 Score=34.47 Aligned_cols=76 Identities=13% Similarity=0.050 Sum_probs=50.8
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++.+||..|+++|--.+++.++. |.+|+.+.++++-... +.+++. ...++.++.+|..+--.- -...|.|+
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~--g~~nv~~~~gd~~~g~~~---~~pfD~Ii 150 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA--GVKNVHVILGDGSKGFPP---KAPYDVII 150 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT--TCCSEEEEESCGGGCCGG---GCCEEEEE
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc--CCceeEEEECccccCCcc---cCcceeEE
Confidence 56689999999888888877776 5679999998643221 222222 247899999998642211 12468888
Q ss_pred Ecccc
Q 026852 85 HTASP 89 (232)
Q Consensus 85 ~~Ag~ 89 (232)
-.++.
T Consensus 151 v~~a~ 155 (215)
T d1jg1a_ 151 VTAGA 155 (215)
T ss_dssp ECSBB
T ss_pred eeccc
Confidence 77764
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=85.99 E-value=0.46 Score=34.02 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=28.0
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
++|.|| |..|...+.++.+.|.+|.++.+++
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence 788888 8899999999999999999998764
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=85.92 E-value=0.61 Score=30.10 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=27.4
Q ss_pred cEEEEECCCChhHHHHHHHHHHC---CCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR---GYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~---g~~V~~~~r~~~ 43 (232)
++++|.|| |++|.+++..|.+. |.+|.++.|++.
T Consensus 19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence 67888876 78999999876654 889999998764
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=85.85 E-value=0.49 Score=33.47 Aligned_cols=33 Identities=21% Similarity=0.066 Sum_probs=27.0
Q ss_pred cEEEEECCCChhHHHHHHHHHHC--CCeEEEEEcCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDP 42 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~--g~~V~~~~r~~ 42 (232)
|+|+|.||+ .+|.+++..|.+. +.+|+++.|++
T Consensus 1 ~KVvIIGgG-~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGSS-HGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECSS-HHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECCc-HHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 468888876 9999999999887 45788888764
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=85.74 E-value=1.4 Score=33.88 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=60.4
Q ss_pred CCcEEEEECC-CChhHHHHHHHHHHCCC-eEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHh---hcC
Q 026852 7 EEKVVCVTGA-SGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSA---VDG 79 (232)
Q Consensus 7 ~~~~ilItGa-~g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~~ 79 (232)
++++||=..+ +|+++. +++..|+ +|+.++.++..... ++.+...-...++.+++.|+.+. ++.+ -+.
T Consensus 144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~--l~~~~~~~~~ 217 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY--FKYARRHHLT 217 (317)
T ss_dssp BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH--HHHHHHTTCC
T ss_pred CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHH--HHHHHhhcCC
Confidence 5677775554 444443 3455676 69999998864332 12211111235789999999533 3332 235
Q ss_pred CCEEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 80 CDGVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 80 ~d~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
+|+||...-.+.. +...... -......+++.+.+....+-+++.||.
T Consensus 218 fD~Ii~DPP~f~~-~~~~~~~----~~~~~~~L~~~a~~ll~pgG~l~~~sc 264 (317)
T d2b78a2 218 YDIIIIDPPSFAR-NKKEVFS----VSKDYHKLIRQGLEILSENGLIIASTN 264 (317)
T ss_dssp EEEEEECCCCC------CCCC----HHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCEEEEcChhhcc-chhHHHH----HHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7999977422211 1111111 223345566666665444556666666
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.72 E-value=0.37 Score=36.78 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=28.5
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.++|.|| |.-|..+|+.|++.|++|.++.+++.
T Consensus 3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 5778875 78999999999999999999987664
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=85.34 E-value=0.56 Score=35.10 Aligned_cols=73 Identities=14% Similarity=-0.012 Sum_probs=46.8
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
.++++||=.|+++|+ ++..+++.|++|++++.++..... +.++.....-+..+++.|+.+.. ..+.+|.|+-
T Consensus 119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~-A~~na~~n~~~~~~~~~d~~~~~----~~~~fD~V~a 190 (254)
T d2nxca1 119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQ-AEANAKRNGVRPRFLEGSLEAAL----PFGPFDLLVA 190 (254)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHH-HHHHHHHTTCCCEEEESCHHHHG----GGCCEEEEEE
T ss_pred CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHH-HHHHHHHcCCceeEEeccccccc----cccccchhhh
Confidence 467899999999986 334567789999999999864432 22222222345677777764211 1245788876
Q ss_pred c
Q 026852 86 T 86 (232)
Q Consensus 86 ~ 86 (232)
|
T Consensus 191 n 191 (254)
T d2nxca1 191 N 191 (254)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=85.10 E-value=0.81 Score=29.71 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=27.1
Q ss_pred cEEEEECCC---ChhHHHHHHHHHHCCCeEEEEE
Q 026852 9 KVVCVTGAS---GFVASWLVKLLLQRGYTVKATV 39 (232)
Q Consensus 9 ~~ilItGa~---g~iG~~~~~~l~~~g~~V~~~~ 39 (232)
|.|.|.|+| +-.|..+.+.|++.||+|+.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn 35 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN 35 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence 689999998 5689999999999999987663
|
| >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Thermotoga maritima [TaxId: 2336]
Probab=85.00 E-value=1.6 Score=29.77 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=48.5
Q ss_pred CCCcEEEEEC-CCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhh---h-hcCCCCceEEEEcCCCCcchHHHhhcCC
Q 026852 6 GEEKVVCVTG-ASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR---E-LDGATERLHLFKANLLEEGSFDSAVDGC 80 (232)
Q Consensus 6 ~~~~~ilItG-a~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (232)
++|++|.+.| +...+-..++..+...|+++.++.-..-........ + .......+.+ .+.++++++++
T Consensus 1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~-------~~d~~~ai~~a 73 (161)
T d1vlva2 1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSF-------TSNLEEALAGA 73 (161)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEE-------ESCHHHHHTTC
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEE-------EecHHHhhhhh
Confidence 5789999999 645899999999999999988765432222211111 1 1111233322 45677899999
Q ss_pred CEEEEcc
Q 026852 81 DGVFHTA 87 (232)
Q Consensus 81 d~vi~~A 87 (232)
|+|+-..
T Consensus 74 Dviyt~~ 80 (161)
T d1vlva2 74 DVVYTDV 80 (161)
T ss_dssp SEEEECC
T ss_pred hheeccc
Confidence 9998554
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=85.00 E-value=0.68 Score=31.17 Aligned_cols=33 Identities=33% Similarity=0.416 Sum_probs=29.0
Q ss_pred CCcEEEEECCC---ChhHHHHHHHHHHCCCeEEEEE
Q 026852 7 EEKVVCVTGAS---GFVASWLVKLLLQRGYTVKATV 39 (232)
Q Consensus 7 ~~~~ilItGa~---g~iG~~~~~~l~~~g~~V~~~~ 39 (232)
+.|.|.|.||| +..|..+++.|.+.||+|+.+.
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn 53 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN 53 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence 45789999999 6899999999999999987764
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=84.84 E-value=1 Score=31.78 Aligned_cols=74 Identities=18% Similarity=0.028 Sum_probs=46.4
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhcCCCEEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 84 (232)
++..+||=.|++.| . .+..|+++|++|++++.++...+. ..+.. ...-.++++...|+.+... -+.+|.|+
T Consensus 29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~-a~~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~I~ 100 (198)
T d2i6ga1 29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMAN-LERIKAAEGLDNLQTDLVDLNTLTF----DGEYDFIL 100 (198)
T ss_dssp SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCTTEEEEECCTTTCCC----CCCEEEEE
T ss_pred CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHH-HHHHhhhccccchhhhheecccccc----cccccEEE
Confidence 34457899998644 3 556888999999999988753321 11111 1122467888888875432 13468888
Q ss_pred Ecc
Q 026852 85 HTA 87 (232)
Q Consensus 85 ~~A 87 (232)
.+.
T Consensus 101 ~~~ 103 (198)
T d2i6ga1 101 STV 103 (198)
T ss_dssp EES
T ss_pred Eee
Confidence 654
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=84.68 E-value=0.63 Score=35.83 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=28.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC--CeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g--~~V~~~~r~~~ 43 (232)
|+|+|.|| |.-|..++.+|+++| ++|+++.|+.+
T Consensus 5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 78888875 678999999999886 58999998865
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=83.89 E-value=0.56 Score=33.78 Aligned_cols=33 Identities=24% Similarity=0.201 Sum_probs=27.3
Q ss_pred EEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN 43 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~ 43 (232)
+|+|.|| |.-|...+.+|.++|+ +|+++.+++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 4777775 6799999999999997 6999988754
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=83.49 E-value=0.98 Score=35.17 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=56.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhh-hcCCCCceEEEEcCCCCcch-HHHhhcCCCEEEEcc
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE-LDGATERLHLFKANLLEEGS-FDSAVDGCDGVFHTA 87 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~~A 87 (232)
.+=.-+|+|.+|..++ +.+.+|+++..+++... .+.+. ..+...++.++..|+.+.-. ....-..+|+||-.
T Consensus 216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~-~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilD- 289 (358)
T d1uwva2 216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVE-KGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD- 289 (358)
T ss_dssp EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHH-HHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC-
T ss_pred EEEecccccccchhcc----ccccEEEeccCcHHHHH-HHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeC-
Confidence 3445678888887664 45678999988775332 12222 12334678999999865332 22223456887632
Q ss_pred cccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 88 SPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 88 g~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
.+... .. ..++.+.+. +.++|||||.-
T Consensus 290 -----PPR~G----~~-------~~~~~l~~~-~~~~ivYVSCn 316 (358)
T d1uwva2 290 -----PARAG----AA-------GVMQQIIKL-EPIRIVYVSCN 316 (358)
T ss_dssp -----CCTTC----CH-------HHHHHHHHH-CCSEEEEEESC
T ss_pred -----CCCcc----HH-------HHHHHHHHc-CCCEEEEEeCC
Confidence 22222 21 122333444 56899999865
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=83.29 E-value=1.2 Score=31.40 Aligned_cols=75 Identities=8% Similarity=0.015 Sum_probs=46.6
Q ss_pred CCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
.++++||=.|++.| .++..+++.+.+|++++.++..... +..+...-...++.++.+|+.+.-. -+.+|.|
T Consensus 51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~----~~~fD~I 123 (194)
T d1dusa_ 51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----DRKYNKI 123 (194)
T ss_dssp CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT----TSCEEEE
T ss_pred CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc----cCCceEE
Confidence 35678888887776 3345566778899999988643221 1122222223568999999865321 1357999
Q ss_pred EEcc
Q 026852 84 FHTA 87 (232)
Q Consensus 84 i~~A 87 (232)
+.+.
T Consensus 124 i~~~ 127 (194)
T d1dusa_ 124 ITNP 127 (194)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9764
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=83.26 E-value=0.35 Score=33.77 Aligned_cols=31 Identities=35% Similarity=0.380 Sum_probs=25.0
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~ 41 (232)
+|+|.| +|.+|.+++..|.+.|.+|.++.+.
T Consensus 5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 5 PVVVLG-AGLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence 478888 7899999999999999876655543
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=83.25 E-value=0.33 Score=33.16 Aligned_cols=76 Identities=17% Similarity=0.077 Sum_probs=46.9
Q ss_pred CCCCCcEEEEECCCCh-hHHHHHHHHHHCCC-eEEEEEcCCCCcch--hhhhhhcCCCCceEEEEcCCCCcchHHHhhcC
Q 026852 4 GEGEEKVVCVTGASGF-VASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDG 79 (232)
Q Consensus 4 ~~~~~~~ilItGa~g~-iG~~~~~~l~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (232)
..++|++||=.|++.| +|. +++.+|+ +|+.++.+++.... +.++.. ....++++++.|+.+. +...-++
T Consensus 11 ~~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~-~~~~~~~ii~~D~~~~--l~~~~~~ 83 (152)
T d2esra1 11 PYFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMT-KAENRFTLLKMEAERA--IDCLTGR 83 (152)
T ss_dssp SCCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTT-TCGGGEEEECSCHHHH--HHHBCSC
T ss_pred hhCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhc-ccccchhhhccccccc--ccccccc
Confidence 3567888886666555 444 5567786 79988888753221 222222 2346799999998542 3344456
Q ss_pred CCEEEEc
Q 026852 80 CDGVFHT 86 (232)
Q Consensus 80 ~d~vi~~ 86 (232)
+|+|+-.
T Consensus 84 fDiIf~D 90 (152)
T d2esra1 84 FDLVFLD 90 (152)
T ss_dssp EEEEEEC
T ss_pred cceeEec
Confidence 7988754
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.95 E-value=1.3 Score=32.30 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=52.1
Q ss_pred CCcEEEEECCCChh-HHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFV-ASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~i-G~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+|.+||=.|++.|- -+++++ +.-.+-+|++++.++.... .+.+......++..+..|..+++........+|+|++
T Consensus 73 pG~~VLDlGaGsG~~t~~la~-~VG~~G~V~aVD~s~~~l~--~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~ 149 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVSD-IVGWEGKIFGIEFSPRVLR--ELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHH-HHCTTSEEEEEESCHHHHH--HHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHH-HhCCCCEEEEEeCcHHHHH--HHHHHHHhcCCceEEEEECCCcccccccccceEEEEE
Confidence 56788888877664 334444 3323467999999875332 2222333346788899999999887777777898886
Q ss_pred cc
Q 026852 86 TA 87 (232)
Q Consensus 86 ~A 87 (232)
..
T Consensus 150 d~ 151 (227)
T d1g8aa_ 150 DV 151 (227)
T ss_dssp CC
T ss_pred Ec
Confidence 53
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=82.76 E-value=0.71 Score=32.92 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=28.3
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
++|.|| |..|...+.++.+.|.+|+++.+++.
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~~ 37 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRGA 37 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 788888 67899999999999999999987654
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.71 E-value=1.1 Score=32.15 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=26.2
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|++.|.+ -.|..+.+.|.+.|++|+++...++
T Consensus 1 MkI~~~G~~-~~~~~~l~~L~~~~~~i~~V~t~p~ 34 (203)
T d2bw0a2 1 MKIAVIGQS-LFGQEVYCHLRKEGHEVVGVFTVPD 34 (203)
T ss_dssp CEEEEECCH-HHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred CEEEEEcCC-HHHHHHHHHHHHCCCcEEEEEcCCC
Confidence 357777664 6899999999999999987765443
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=82.58 E-value=0.77 Score=33.40 Aligned_cols=33 Identities=15% Similarity=-0.010 Sum_probs=28.6
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~ 44 (232)
|+|.||+ -.|...+..|+++|++|+++.+++..
T Consensus 5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~ 37 (251)
T d2i0za1 5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKL 37 (251)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 7788775 79999999999999999999987653
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=82.52 E-value=0.76 Score=31.22 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=24.8
Q ss_pred EEEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 10 ~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
+|+|.|| |.+|.+++..|. ++.+|+++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 5777776 599999999885 478999998754
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.51 E-value=0.75 Score=34.37 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=29.8
Q ss_pred cEEEEECCCChhHHHHHHHHHHC-CCeEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~-g~~V~~~~r~~~ 43 (232)
.-|+|.|| |.-|...+.+|+++ |.+|.++.+++.
T Consensus 34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 45899998 89999999999875 999999998764
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=82.39 E-value=1.1 Score=32.71 Aligned_cols=75 Identities=12% Similarity=-0.078 Sum_probs=47.5
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEEc
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 86 (232)
++.+||-.|+++|--.++ |++.+.+|+.+++++.... ..++......++.++..|..+--. . -..+|.|+.+
T Consensus 70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~--~A~~~~~~~~nv~~~~~d~~~g~~--~-~~pfD~Iiv~ 141 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYN--YASKLLSYYNNIKLILGDGTLGYE--E-EKPYDRVVVW 141 (224)
T ss_dssp TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHH--HHHHHHTTCSSEEEEESCGGGCCG--G-GCCEEEEEES
T ss_pred ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHH--HHHHHHhcccccccccCchhhcch--h-hhhHHHHHhh
Confidence 567899999998854444 4455678999998875332 122222235689999999753211 1 1236998887
Q ss_pred ccc
Q 026852 87 ASP 89 (232)
Q Consensus 87 Ag~ 89 (232)
|+.
T Consensus 142 ~a~ 144 (224)
T d1vbfa_ 142 ATA 144 (224)
T ss_dssp SBB
T ss_pred cch
Confidence 753
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=82.33 E-value=0.06 Score=37.02 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=18.8
Q ss_pred CCChhHHHHHHHHHHCCCe-EEEEEcCCCCc
Q 026852 16 ASGFVASWLVKLLLQRGYT-VKATVRDPNSP 45 (232)
Q Consensus 16 a~g~iG~~~~~~l~~~g~~-V~~~~r~~~~~ 45 (232)
|+|-+|+++++.|.+ +++ +.+.+|++++.
T Consensus 6 G~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~ 35 (153)
T d2i76a2 6 GTGTLTRFFLECLKD-RYEIGYILSRSIDRA 35 (153)
T ss_dssp SCCHHHHHHHHTTC-----CCCEECSSHHHH
T ss_pred eCcHHHHHHHHHHHh-CCCEEEEEeCChhhh
Confidence 567799999987755 554 45788887543
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.24 E-value=2.5 Score=32.41 Aligned_cols=115 Identities=16% Similarity=0.113 Sum_probs=61.9
Q ss_pred CCcEEEEECCC-ChhHHHHHHHHHHCCC-eEEEEEcCCCCcchhhhhh--hcCCCCceEEEEcCCCCcch-HHHhhcCCC
Q 026852 7 EEKVVCVTGAS-GFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRE--LDGATERLHLFKANLLEEGS-FDSAVDGCD 81 (232)
Q Consensus 7 ~~~~ilItGa~-g~iG~~~~~~l~~~g~-~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d 81 (232)
++++||=.|++ |+++. .+++.|. +|+.++.++...+. ..++ ...-..+++++..|+.+.-. +...-+.+|
T Consensus 145 ~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~-a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD 219 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIET-AKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFD 219 (324)
T ss_dssp TTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHH-HHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHH-HHHHHHHcCCCccceeeechhhhhhHHHHhccCCCC
Confidence 36777776664 44343 3445665 79999998854321 1111 12223578999999864322 112223579
Q ss_pred EEEEcccccccCCCCchhhhhHHHHHHHHHHHHHHHhhCCccEEEEeccc
Q 026852 82 GVFHTASPVIFLSDNPQADIVDPAVMGTLNVLRSCAKVHSIKRVVLTSSI 131 (232)
Q Consensus 82 ~vi~~Ag~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~vSS~ 131 (232)
.||.....+.. . ......-......+++.+.+....+-++..+|+
T Consensus 220 ~Vi~DpP~~~~-~----~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~ 264 (324)
T d2as0a2 220 IVVLDPPAFVQ-H----EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 264 (324)
T ss_dssp EEEECCCCSCS-S----GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred chhcCCccccC-C----HHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 99987532221 1 122333444566677777665444444444444
|
| >d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Pyrococcus abyssi [TaxId: 29292]
Probab=81.55 E-value=1.8 Score=29.35 Aligned_cols=75 Identities=11% Similarity=0.039 Sum_probs=49.4
Q ss_pred CCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|++|.+.|=- +.+...++..+...|++++++.-...................+.. ..+++++++++|+|
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~av~~aDvv 74 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVE-------TTTLEDVIGKLDVL 74 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEE-------ESCTHHHHTTCSEE
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhccccee-------ecCHHHhhccCcEE
Confidence 578999999985 889999999999999998887644333322222222222222322 33456788999988
Q ss_pred EEcc
Q 026852 84 FHTA 87 (232)
Q Consensus 84 i~~A 87 (232)
+-..
T Consensus 75 y~~~ 78 (157)
T d1ml4a2 75 YVTR 78 (157)
T ss_dssp EECC
T ss_pred Eeec
Confidence 7553
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.49 E-value=1.2 Score=32.67 Aligned_cols=34 Identities=21% Similarity=0.148 Sum_probs=28.5
Q ss_pred cEEEEECCCChhHHHHHHHHHHCCC-eEEEEEcCCC
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN 43 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g~-~V~~~~r~~~ 43 (232)
.+|+|.|| |.-|..++..|.+.|. +|.++.|++.
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 36788876 6789999999999995 8889988775
|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=81.31 E-value=1.8 Score=28.28 Aligned_cols=38 Identities=21% Similarity=-0.040 Sum_probs=29.4
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
.+++|+|+|.|+ |--...-+..|.+-.-+|+++.|.++
T Consensus 27 ~~~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~ 64 (126)
T d1fl2a2 27 LFKGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE 64 (126)
T ss_dssp GGBTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred hcCCceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence 367899999997 55566666677777779999998765
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=81.27 E-value=1.5 Score=31.94 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=49.3
Q ss_pred CCcEEEEECCCChhH-HHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVA-SWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG-~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
+|.+||=.|++.|.= +++++. .. +..|++++.++.-. ..+.+......++.++..|..+++........+|.+++
T Consensus 74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i--~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~ 149 (230)
T d1g8sa_ 74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIM--RELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHH--HHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHH--HHHHHHHhhhcccceEEEeeccCcccccccceeEEeec
Confidence 567899999887743 344432 22 35899999987532 22333334456788899999988877665555566655
Q ss_pred c
Q 026852 86 T 86 (232)
Q Consensus 86 ~ 86 (232)
.
T Consensus 150 ~ 150 (230)
T d1g8sa_ 150 D 150 (230)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=81.12 E-value=0.62 Score=34.64 Aligned_cols=31 Identities=23% Similarity=0.075 Sum_probs=26.7
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~ 42 (232)
|+|.|| |-.|..++.+|+++|++|+++++..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 666654 6799999999999999999998864
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=81.10 E-value=0.9 Score=32.64 Aligned_cols=75 Identities=9% Similarity=-0.044 Sum_probs=47.6
Q ss_pred CCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhh-cCCCCceEEEEcCCCCcchHHHhhcCCCEEEE
Q 026852 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (232)
Q Consensus 7 ~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 85 (232)
++++||=.|++.|.- +..+++.|++|++++.+++-... +.+.. .....++.++.+|..+.. +. -..+|+|+.
T Consensus 15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~-A~~~~~~~~~~~i~~~~~d~~~l~-~~--~~~fD~v~~ 87 (231)
T d1vl5a_ 15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKV-ARAFIEGNGHQQVEYVQGDAEQMP-FT--DERFHIVTC 87 (231)
T ss_dssp SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHH-HHHHHHHTTCCSEEEEECCC-CCC-SC--TTCEEEEEE
T ss_pred CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhh-hhhccccccccccccccccccccc-cc--ccccccccc
Confidence 357899999988754 35677889999999888743221 11111 122467899999997653 11 134688886
Q ss_pred ccc
Q 026852 86 TAS 88 (232)
Q Consensus 86 ~Ag 88 (232)
...
T Consensus 88 ~~~ 90 (231)
T d1vl5a_ 88 RIA 90 (231)
T ss_dssp ESC
T ss_pred ccc
Confidence 654
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.81 E-value=0.97 Score=34.21 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=26.9
Q ss_pred EEEECCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 026852 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (232)
Q Consensus 11 ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~ 43 (232)
|+|.|| |.-|...+.+|.++|++|+++.++..
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~~ 33 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARDR 33 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 566665 57899999999999999999987653
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=80.68 E-value=2.3 Score=29.47 Aligned_cols=77 Identities=21% Similarity=0.224 Sum_probs=42.7
Q ss_pred cEEEEECCCChhHHHHHHHHHHCC-CeEEEE-EcCCCCcchhhhhhhcCCCCceEE---------EEcCCCCcchHHHhh
Q 026852 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKAT-VRDPNSPKTEHLRELDGATERLHL---------FKANLLEEGSFDSAV 77 (232)
Q Consensus 9 ~~ilItGa~g~iG~~~~~~l~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~---------~~~D~~~~~~~~~~~ 77 (232)
++|.|-| -|.||+.+++.+++++ .+|+.+ ++++.... ..+.... .+... -...+.-......++
T Consensus 2 ~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~-~~l~~~~---~~~~~~~~~~~~~~~~~~~~v~g~~~~~~ 76 (171)
T d1cf2o1 2 KAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA-RMALKKG---YDLYVAIPERVKLFEKAGIEVAGTVDDML 76 (171)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHH-HHHHHTT---CCEEESSGGGHHHHHHTTCCCCEEHHHHH
T ss_pred eEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHH-HHHHhcC---CceEecccccceeecccCcccCCChhHhh
Confidence 5788887 5889999999998875 455544 44433111 1111111 01110 000111122445566
Q ss_pred cCCCEEEEccccc
Q 026852 78 DGCDGVFHTASPV 90 (232)
Q Consensus 78 ~~~d~vi~~Ag~~ 90 (232)
+++|+||-|.|.+
T Consensus 77 ~~vDvViEcTG~f 89 (171)
T d1cf2o1 77 DEADIVIDCTPEG 89 (171)
T ss_dssp HTCSEEEECCSTT
T ss_pred cCCCEEEEccCCC
Confidence 7899999998754
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=80.47 E-value=3.9 Score=32.09 Aligned_cols=81 Identities=12% Similarity=0.151 Sum_probs=52.9
Q ss_pred CCCCcEEEEECCCChhHHHHHHHHHHCCCeEEEEEcCCCCcchh---hhhhhcCCCCceEEEEcCCCCcch---HHHhhc
Q 026852 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE---HLRELDGATERLHLFKANLLEEGS---FDSAVD 78 (232)
Q Consensus 5 ~~~~~~ilItGa~g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~ 78 (232)
-|+|-+||=.+ ...-|-...+.|+..|++|+-+-+-....... ...... ..+-+.+..|+.+.+. +.++++
T Consensus 8 PL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~--n~~K~si~ldl~~~~G~~~~~~Lv~ 84 (402)
T d1xk7a1 8 PLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLS--RRNLHALSLNIFKDEGREAFLKLME 84 (402)
T ss_dssp TTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHH--TTTCEEEEECTTSHHHHHHHHHHHT
T ss_pred CCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHh--CCCCeEEEEeCcCHHHHHHHHHHHh
Confidence 47776666444 45568888999999999999887533111100 011111 2334678899987665 667788
Q ss_pred CCCEEEEccc
Q 026852 79 GCDGVFHTAS 88 (232)
Q Consensus 79 ~~d~vi~~Ag 88 (232)
++|+||+|--
T Consensus 85 ~aDv~i~n~r 94 (402)
T d1xk7a1 85 TTDIFIEASK 94 (402)
T ss_dssp TCSEEEEECS
T ss_pred hcCCceeeec
Confidence 9999999963
|
| >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=80.06 E-value=1.3 Score=30.01 Aligned_cols=72 Identities=11% Similarity=0.050 Sum_probs=44.6
Q ss_pred CCCcEEEEECCC--ChhHHHHHHHHHHCCCeEEEEEcCCCCcchhhhhhhcCCCCceEEEEcCCCCcchHHHhhcCCCEE
Q 026852 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (232)
Q Consensus 6 ~~~~~ilItGa~--g~iG~~~~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 83 (232)
++|++|.+.|=. |.+...++..+...|.+++.+.-.+.....+.. ......++.+ .+++.++++++|+|
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~--~~~~~~~~~~-------~~d~~eai~~aDvv 71 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKE-------VENPFEVINEVDVL 71 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEE-------ESCGGGTGGGCSEE
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhh--cccCCCeEEE-------EeCHHHHhhcCCeE
Confidence 467899999974 559999999999999987665443321111111 1112233433 23455778889987
Q ss_pred EEc
Q 026852 84 FHT 86 (232)
Q Consensus 84 i~~ 86 (232)
+-.
T Consensus 72 y~~ 74 (153)
T d1pg5a2 72 YVT 74 (153)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
|