Query 026854
Match_columns 232
No_of_seqs 377 out of 1270
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 13:39:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026854.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026854hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 99.9 3.2E-22 7E-27 167.5 19.8 145 77-223 597-741 (742)
2 KOG0253 Synaptic vesicle trans 99.9 2.6E-22 5.6E-27 150.9 17.0 208 14-223 311-527 (528)
3 TIGR02332 HpaX 4-hydroxyphenyl 99.9 8E-22 1.7E-26 157.4 20.0 184 26-220 5-194 (412)
4 KOG0569 Permease of the major 99.9 2.3E-21 5E-26 153.7 19.4 205 15-231 254-470 (485)
5 COG2814 AraJ Arabinose efflux 99.9 4.6E-21 1E-25 147.9 19.2 181 25-216 9-189 (394)
6 PRK10213 nepI ribonucleoside t 99.9 6.8E-21 1.5E-25 151.2 20.6 184 25-219 16-199 (394)
7 PRK03545 putative arabinose tr 99.9 6.7E-21 1.5E-25 151.2 19.6 179 30-219 10-188 (390)
8 TIGR00887 2A0109 phosphate:H+ 99.9 2.7E-21 5.9E-26 158.1 17.7 199 18-228 273-501 (502)
9 COG2271 UhpC Sugar phosphate p 99.9 7.4E-22 1.6E-26 151.1 12.7 189 20-219 20-210 (448)
10 PRK11663 regulatory protein Uh 99.9 6.5E-21 1.4E-25 153.2 17.3 178 30-218 24-201 (434)
11 TIGR00710 efflux_Bcr_CflA drug 99.9 1.1E-20 2.3E-25 149.7 17.7 182 29-221 5-186 (385)
12 TIGR00891 2A0112 putative sial 99.9 3.1E-20 6.6E-25 147.9 19.6 183 25-219 8-192 (405)
13 PRK14995 methyl viologen resis 99.9 2.6E-20 5.5E-25 152.1 19.5 182 28-220 5-187 (495)
14 PRK11551 putative 3-hydroxyphe 99.9 1.8E-20 4E-25 149.4 17.5 183 26-219 12-194 (406)
15 PF07690 MFS_1: Major Facilita 99.9 4.6E-20 1E-24 144.1 18.4 172 36-218 3-175 (352)
16 PRK11273 glpT sn-glycerol-3-ph 99.9 3.4E-20 7.3E-25 149.9 17.8 207 1-219 1-212 (452)
17 PRK10091 MFS transport protein 99.9 4.9E-20 1.1E-24 145.9 18.2 181 29-220 3-183 (382)
18 PRK10504 putative transporter; 99.9 7.7E-20 1.7E-24 148.6 19.6 181 27-218 8-188 (471)
19 PRK10642 proline/glycine betai 99.9 8.8E-20 1.9E-24 148.8 19.6 194 18-223 240-437 (490)
20 PRK10054 putative transporter; 99.9 6.8E-20 1.5E-24 145.6 18.2 178 29-218 7-185 (395)
21 TIGR01299 synapt_SV2 synaptic 99.9 7.3E-20 1.6E-24 153.5 19.2 180 28-219 166-358 (742)
22 PRK03893 putative sialic acid 99.9 8.9E-20 1.9E-24 149.1 19.4 190 17-218 8-197 (496)
23 TIGR00895 2A0115 benzoate tran 99.9 2.6E-20 5.6E-25 147.8 15.7 182 27-219 15-196 (398)
24 PRK12307 putative sialic acid 99.9 8.2E-20 1.8E-24 146.6 18.4 166 26-202 15-180 (426)
25 TIGR00711 efflux_EmrB drug res 99.9 3.6E-20 7.8E-25 151.0 16.5 179 31-220 4-182 (485)
26 TIGR00903 2A0129 major facilit 99.8 6.6E-20 1.4E-24 144.0 16.5 168 41-220 3-170 (368)
27 TIGR00893 2A0114 d-galactonate 99.8 3.9E-20 8.5E-25 146.5 15.2 169 41-220 6-174 (399)
28 PLN00028 nitrate transmembrane 99.8 2.7E-19 5.9E-24 145.3 20.1 182 24-217 31-221 (476)
29 PRK10473 multidrug efflux syst 99.8 1.6E-19 3.4E-24 143.5 18.0 174 36-220 10-183 (392)
30 PRK03699 putative transporter; 99.8 4.6E-19 1E-23 140.9 20.0 176 26-212 4-180 (394)
31 PRK11652 emrD multidrug resist 99.8 3.2E-19 7E-24 141.8 18.9 184 26-220 5-188 (394)
32 TIGR00900 2A0121 H+ Antiporter 99.8 2.2E-19 4.7E-24 141.0 17.5 166 37-213 7-177 (365)
33 PRK15402 multidrug efflux syst 99.8 4.6E-19 1E-23 141.4 18.2 170 40-220 24-193 (406)
34 PRK15403 multidrug efflux syst 99.8 4.9E-19 1.1E-23 141.5 18.2 149 72-220 48-196 (413)
35 KOG1330 Sugar transporter/spin 99.8 4.2E-21 9.1E-26 148.4 5.8 188 27-225 31-219 (493)
36 TIGR00924 yjdL_sub1_fam amino 99.8 4.8E-19 1E-23 143.6 17.7 176 27-210 8-187 (475)
37 TIGR00890 2A0111 Oxalate/Forma 99.8 1.7E-19 3.7E-24 142.1 14.2 173 33-217 7-179 (377)
38 PRK10489 enterobactin exporter 99.8 5.7E-19 1.2E-23 141.4 17.3 176 46-231 240-415 (417)
39 PRK09874 drug efflux system pr 99.8 1.6E-18 3.6E-23 138.3 19.4 176 31-218 16-196 (408)
40 PRK10077 xylE D-xylose transpo 99.8 2.2E-18 4.7E-23 140.4 20.3 175 45-230 287-472 (479)
41 TIGR00881 2A0104 phosphoglycer 99.8 1.1E-19 2.5E-24 143.2 11.8 170 38-218 4-174 (379)
42 TIGR00886 2A0108 nitrite extru 99.8 1.3E-18 2.7E-23 137.0 17.7 176 31-218 3-191 (366)
43 PRK10207 dipeptide/tripeptide 99.8 1.1E-18 2.5E-23 141.6 17.5 171 26-206 11-185 (489)
44 PRK15462 dipeptide/tripeptide 99.8 1.4E-18 3E-23 139.8 17.7 174 27-210 7-184 (493)
45 TIGR00712 glpT glycerol-3-phos 99.8 4E-19 8.7E-24 143.1 14.7 179 29-219 27-210 (438)
46 PRK11102 bicyclomycin/multidru 99.8 7.1E-19 1.5E-23 139.0 15.6 162 47-219 9-170 (377)
47 PRK11551 putative 3-hydroxyphe 99.8 2.2E-18 4.8E-23 137.5 18.6 175 29-214 220-395 (406)
48 PRK09556 uhpT sugar phosphate 99.8 1.8E-19 3.9E-24 146.2 12.5 173 34-217 34-214 (467)
49 TIGR00898 2A0119 cation transp 99.8 2E-18 4.4E-23 141.5 18.7 187 18-225 315-504 (505)
50 PRK11646 multidrug resistance 99.8 3E-18 6.6E-23 136.4 19.0 174 33-218 14-188 (400)
51 PRK11043 putative transporter; 99.8 3.7E-18 8.1E-23 136.0 19.4 146 72-217 38-183 (401)
52 TIGR00879 SP MFS transporter, 99.8 3.6E-18 7.8E-23 138.6 18.0 180 34-224 289-479 (481)
53 PRK10406 alpha-ketoglutarate t 99.8 5.7E-18 1.2E-22 136.2 18.9 180 31-219 24-222 (432)
54 TIGR00897 2A0118 polyol permea 99.8 2.6E-18 5.6E-23 137.0 16.8 179 27-216 11-194 (402)
55 PRK10642 proline/glycine betai 99.8 7.5E-18 1.6E-22 137.5 19.7 182 28-219 15-216 (490)
56 PRK09556 uhpT sugar phosphate 99.8 3.9E-18 8.5E-23 138.4 17.3 176 29-214 258-448 (467)
57 PRK10077 xylE D-xylose transpo 99.8 6.1E-18 1.3E-22 137.7 18.3 148 71-219 51-218 (479)
58 TIGR00887 2A0109 phosphate:H+ 99.8 7.3E-18 1.6E-22 138.0 18.2 187 27-220 14-229 (502)
59 PRK05122 major facilitator sup 99.8 9.3E-18 2E-22 133.6 18.3 170 29-209 15-193 (399)
60 PRK11195 lysophospholipid tran 99.8 6.7E-18 1.4E-22 134.1 17.2 171 33-219 7-177 (393)
61 PRK12382 putative transporter; 99.8 1.7E-17 3.7E-22 131.9 19.4 165 29-204 15-188 (392)
62 TIGR00879 SP MFS transporter, 99.8 1.5E-18 3.2E-23 140.8 13.5 147 72-219 68-220 (481)
63 TIGR00894 2A0114euk Na(+)-depe 99.8 2.5E-18 5.4E-23 139.6 14.3 150 69-218 70-222 (465)
64 COG2271 UhpC Sugar phosphate p 99.8 2.5E-18 5.5E-23 131.9 13.4 190 17-216 238-435 (448)
65 PRK03633 putative MFS family t 99.8 2.9E-17 6.2E-22 130.1 19.7 154 27-191 4-157 (381)
66 PRK15034 nitrate/nitrite trans 99.8 4.1E-17 8.9E-22 130.1 20.0 179 28-218 33-235 (462)
67 TIGR00889 2A0110 nucleoside tr 99.8 1.1E-17 2.4E-22 133.8 16.4 149 74-222 250-409 (418)
68 PRK12307 putative sialic acid 99.8 3.5E-17 7.6E-22 131.4 18.9 190 19-219 221-413 (426)
69 PRK09705 cynX putative cyanate 99.8 1.8E-17 3.9E-22 131.7 17.0 150 46-207 26-176 (393)
70 PRK15075 citrate-proton sympor 99.8 2.1E-17 4.5E-22 133.0 17.2 164 28-202 14-199 (434)
71 cd06174 MFS The Major Facilita 99.8 1.5E-17 3.2E-22 129.8 15.5 167 34-211 4-170 (352)
72 PRK09584 tppB putative tripept 99.8 3.1E-17 6.8E-22 133.8 18.0 170 28-207 20-193 (500)
73 PRK10489 enterobactin exporter 99.8 8.8E-18 1.9E-22 134.6 14.2 169 38-218 26-199 (417)
74 TIGR00892 2A0113 monocarboxyla 99.8 2.3E-17 5E-22 133.4 16.5 158 46-215 36-194 (455)
75 PRK09705 cynX putative cyanate 99.8 6.1E-17 1.3E-21 128.7 18.5 181 30-223 206-389 (393)
76 PRK09952 shikimate transporter 99.8 1.4E-16 3.1E-21 128.3 20.7 178 31-219 252-436 (438)
77 TIGR00899 2A0120 sugar efflux 99.8 4.2E-17 9.1E-22 128.7 17.2 173 37-220 5-181 (375)
78 PRK11663 regulatory protein Uh 99.8 5E-17 1.1E-21 130.8 17.9 183 29-221 243-430 (434)
79 PRK09952 shikimate transporter 99.8 1.1E-16 2.4E-21 128.9 18.8 181 28-219 21-223 (438)
80 TIGR00890 2A0111 Oxalate/Forma 99.8 4.2E-17 9.1E-22 128.5 16.0 160 38-208 214-375 (377)
81 TIGR00885 fucP L-fucose:H+ sym 99.8 1.3E-16 2.8E-21 127.3 18.8 177 30-217 4-210 (410)
82 PRK15075 citrate-proton sympor 99.8 1.1E-16 2.3E-21 129.0 18.5 150 35-194 244-398 (434)
83 PRK10406 alpha-ketoglutarate t 99.8 2.8E-16 6.1E-21 126.4 20.0 183 18-213 234-422 (432)
84 PRK10133 L-fucose transporter; 99.8 2.6E-16 5.5E-21 126.6 19.7 153 25-188 22-177 (438)
85 PRK05122 major facilitator sup 99.8 2.3E-16 5.1E-21 125.6 19.2 166 42-221 229-394 (399)
86 PRK15011 sugar efflux transpor 99.8 2.3E-16 5.1E-21 125.4 19.0 163 43-217 230-392 (393)
87 TIGR00806 rfc RFC reduced fola 99.7 4.7E-16 1E-20 122.6 19.5 155 47-214 44-202 (511)
88 PRK09528 lacY galactoside perm 99.7 7.9E-17 1.7E-21 129.2 15.7 146 72-217 259-405 (420)
89 PRK11273 glpT sn-glycerol-3-ph 99.7 2E-16 4.4E-21 127.9 18.1 176 29-214 253-434 (452)
90 TIGR00880 2_A_01_02 Multidrug 99.7 7.7E-17 1.7E-21 109.4 13.3 136 83-218 6-141 (141)
91 PRK03699 putative transporter; 99.7 1.2E-16 2.6E-21 127.1 15.7 176 28-214 204-379 (394)
92 COG2223 NarK Nitrate/nitrite t 99.7 2.1E-16 4.5E-21 121.5 15.9 183 23-218 8-196 (417)
93 TIGR00902 2A0127 phenyl propri 99.7 7E-16 1.5E-20 122.2 19.5 169 29-210 205-374 (382)
94 TIGR00883 2A0106 metabolite-pr 99.7 3E-16 6.5E-21 124.4 17.4 174 18-202 209-388 (394)
95 PRK03545 putative arabinose tr 99.7 7.4E-16 1.6E-20 122.4 18.9 162 42-215 218-380 (390)
96 TIGR00897 2A0118 polyol permea 99.7 7.9E-16 1.7E-20 122.7 18.7 172 29-213 222-399 (402)
97 cd06174 MFS The Major Facilita 99.7 9.4E-16 2E-20 119.6 18.6 171 33-213 179-350 (352)
98 PTZ00207 hypothetical protein; 99.7 1.4E-15 3.1E-20 124.5 20.1 166 38-217 36-207 (591)
99 TIGR00898 2A0119 cation transp 99.7 6.1E-17 1.3E-21 132.8 12.0 142 74-219 126-267 (505)
100 TIGR00893 2A0114 d-galactonate 99.7 5.3E-16 1.2E-20 122.8 16.8 173 29-212 215-396 (399)
101 TIGR00899 2A0120 sugar efflux 99.7 1.3E-15 2.8E-20 120.2 18.3 141 72-213 232-372 (375)
102 KOG3764 Vesicular amine transp 99.7 5.6E-17 1.2E-21 123.5 9.5 154 69-222 100-254 (464)
103 KOG2615 Permease of the major 99.7 6.1E-17 1.3E-21 122.6 9.0 146 72-218 65-216 (451)
104 KOG0252 Inorganic phosphate tr 99.7 1.8E-17 3.9E-22 128.3 6.2 199 27-229 302-511 (538)
105 PRK11010 ampG muropeptide tran 99.7 2.7E-15 5.8E-20 122.4 19.3 180 26-219 9-198 (491)
106 PRK09874 drug efflux system pr 99.7 5.1E-16 1.1E-20 124.0 14.8 138 78-215 261-398 (408)
107 COG2223 NarK Nitrate/nitrite t 99.7 8.9E-16 1.9E-20 118.0 15.2 177 28-215 217-401 (417)
108 PRK12382 putative transporter; 99.7 1.6E-15 3.6E-20 120.5 17.4 160 43-215 230-389 (392)
109 KOG2532 Permease of the major 99.7 4.8E-15 1E-19 118.9 19.1 150 69-218 67-219 (466)
110 PRK15011 sugar efflux transpor 99.7 5E-15 1.1E-19 117.8 19.1 177 31-219 17-198 (393)
111 KOG0255 Synaptic vesicle trans 99.7 6.1E-16 1.3E-20 127.3 14.4 144 72-219 115-258 (521)
112 PF00083 Sugar_tr: Sugar (and 99.7 2.6E-20 5.6E-25 150.6 -11.3 199 18-229 240-450 (451)
113 KOG0254 Predicted transporter 99.7 2.1E-15 4.6E-20 123.8 17.4 201 18-230 283-498 (513)
114 PRK03633 putative MFS family t 99.7 5.6E-15 1.2E-19 117.1 19.1 152 47-212 218-369 (381)
115 PRK03893 putative sialic acid 99.7 1.5E-15 3.2E-20 124.4 16.3 147 47-204 293-442 (496)
116 PRK11902 ampG muropeptide tran 99.7 7.2E-15 1.6E-19 117.2 18.8 171 35-219 5-185 (402)
117 PF11700 ATG22: Vacuole efflux 99.7 6E-15 1.3E-19 119.0 18.4 185 27-222 279-474 (477)
118 TIGR00895 2A0115 benzoate tran 99.7 2.6E-15 5.7E-20 119.2 15.9 153 23-187 244-397 (398)
119 TIGR00805 oat sodium-independe 99.7 5.3E-16 1.1E-20 129.6 12.1 159 47-217 51-282 (633)
120 TIGR00712 glpT glycerol-3-phos 99.7 1.7E-15 3.6E-20 122.2 14.5 179 31-219 253-437 (438)
121 PRK08633 2-acyl-glycerophospho 99.7 7.4E-15 1.6E-19 131.2 19.7 117 74-190 46-165 (1146)
122 TIGR00792 gph sugar (Glycoside 99.7 5.6E-15 1.2E-19 119.1 17.1 153 30-193 223-383 (437)
123 PRK15034 nitrate/nitrite trans 99.7 8.6E-15 1.9E-19 116.9 17.7 176 28-215 251-454 (462)
124 TIGR00901 2A0125 AmpG-related 99.7 5.1E-15 1.1E-19 116.2 16.2 159 48-219 7-182 (356)
125 PRK09528 lacY galactoside perm 99.7 9.1E-15 2E-19 117.3 17.9 178 29-218 10-194 (420)
126 PRK06814 acylglycerophosphoeth 99.7 1.1E-14 2.4E-19 130.0 20.1 143 75-218 52-197 (1140)
127 TIGR00903 2A0129 major facilit 99.7 1.1E-14 2.4E-19 114.6 17.6 174 19-212 185-362 (368)
128 PF05977 MFS_3: Transmembrane 99.7 1.9E-14 4E-19 117.3 19.3 145 72-216 42-191 (524)
129 KOG0254 Predicted transporter 99.7 6.6E-15 1.4E-19 120.9 16.5 144 75-220 89-234 (513)
130 COG2814 AraJ Arabinose efflux 99.7 2E-14 4.4E-19 111.4 18.0 187 17-215 199-386 (394)
131 TIGR02332 HpaX 4-hydroxyphenyl 99.7 5.1E-15 1.1E-19 118.4 15.2 166 29-203 242-409 (412)
132 TIGR00891 2A0112 putative sial 99.7 7.3E-15 1.6E-19 117.0 15.8 144 42-195 251-396 (405)
133 TIGR00882 2A0105 oligosacchari 99.7 1.3E-14 2.7E-19 115.6 17.0 177 29-218 2-186 (396)
134 TIGR00896 CynX cyanate transpo 99.7 3.7E-15 8E-20 117.0 13.7 147 47-206 18-166 (355)
135 PLN00028 nitrate transmembrane 99.6 1.3E-14 2.9E-19 118.1 16.6 174 29-214 252-432 (476)
136 TIGR00892 2A0113 monocarboxyla 99.6 2.1E-15 4.5E-20 122.1 11.7 169 30-209 242-415 (455)
137 PRK11128 putative 3-phenylprop 99.6 5.3E-14 1.1E-18 111.6 19.4 175 18-208 197-372 (382)
138 PF03825 Nuc_H_symport: Nucleo 99.6 3.9E-14 8.5E-19 112.1 18.5 174 36-219 214-399 (400)
139 TIGR00902 2A0127 phenyl propri 99.6 2.4E-14 5.1E-19 113.5 17.1 158 34-204 9-168 (382)
140 TIGR01301 GPH_sucrose GPH fami 99.6 4.4E-14 9.6E-19 113.5 18.6 180 29-219 4-222 (477)
141 TIGR00883 2A0106 metabolite-pr 99.6 1.1E-14 2.4E-19 115.3 15.3 134 85-219 45-194 (394)
142 TIGR00900 2A0121 H+ Antiporter 99.6 1.3E-14 2.9E-19 113.9 15.3 147 36-192 217-365 (365)
143 PRK11010 ampG muropeptide tran 99.6 4.1E-14 9E-19 115.5 18.2 143 72-214 255-402 (491)
144 PF01306 LacY_symp: LacY proto 99.6 2.8E-14 6.1E-19 111.7 16.4 197 18-221 209-406 (412)
145 PRK10504 putative transporter; 99.6 7.1E-14 1.5E-18 113.8 19.5 148 35-193 267-418 (471)
146 PF06609 TRI12: Fungal trichot 99.6 3.9E-14 8.5E-19 115.7 16.9 151 49-212 64-214 (599)
147 TIGR00882 2A0105 oligosacchari 99.6 4E-14 8.6E-19 112.8 16.5 142 72-213 251-393 (396)
148 PRK11128 putative 3-phenylprop 99.6 4.1E-14 8.9E-19 112.2 16.5 165 38-218 13-181 (382)
149 COG3104 PTR2 Dipeptide/tripept 99.6 8.6E-15 1.9E-19 115.1 12.0 183 27-215 19-206 (498)
150 TIGR02718 sider_RhtX_FptX side 99.6 9.3E-14 2E-18 110.4 17.6 157 43-210 222-386 (390)
151 COG2270 Permeases of the major 99.6 4E-14 8.7E-19 109.2 14.2 181 31-222 254-435 (438)
152 PF05977 MFS_3: Transmembrane 99.6 9.2E-14 2E-18 113.3 16.7 155 48-212 237-391 (524)
153 TIGR00894 2A0114euk Na(+)-depe 99.6 1.1E-13 2.4E-18 112.5 17.1 175 29-214 261-449 (465)
154 TIGR00896 CynX cyanate transpo 99.6 9.7E-14 2.1E-18 108.9 15.9 150 32-193 200-351 (355)
155 TIGR01272 gluP glucose/galacto 99.6 3.8E-13 8.2E-18 103.5 18.6 164 29-203 140-303 (310)
156 KOG0569 Permease of the major 99.6 9.3E-14 2E-18 110.8 14.1 143 77-220 62-209 (485)
157 PRK15402 multidrug efflux syst 99.6 4.3E-13 9.3E-18 107.2 18.0 173 31-214 217-394 (406)
158 TIGR00881 2A0104 phosphoglycer 99.6 7.2E-14 1.6E-18 110.2 12.9 158 29-196 216-378 (379)
159 PRK10213 nepI ribonucleoside t 99.6 1.4E-12 3E-17 103.9 19.4 161 38-210 225-386 (394)
160 KOG2533 Permease of the major 99.5 2E-13 4.4E-18 110.0 14.5 149 72-220 78-232 (495)
161 PRK10054 putative transporter; 99.5 4E-13 8.6E-18 107.0 15.7 142 72-214 241-383 (395)
162 TIGR00901 2A0125 AmpG-related 99.5 1.8E-13 3.8E-18 107.5 13.5 145 19-174 199-355 (356)
163 PRK11646 multidrug resistance 99.5 6.3E-13 1.4E-17 106.0 16.2 152 48-210 227-383 (400)
164 PRK11902 ampG muropeptide tran 99.5 1.2E-12 2.6E-17 104.5 17.5 139 72-214 242-389 (402)
165 PRK10473 multidrug efflux syst 99.5 1.2E-12 2.6E-17 104.2 17.2 125 72-201 236-360 (392)
166 PRK11043 putative transporter; 99.5 2.3E-12 4.9E-17 102.9 18.9 141 42-194 216-361 (401)
167 PF00083 Sugar_tr: Sugar (and 99.5 1.1E-16 2.3E-21 129.6 -6.1 145 74-219 45-195 (451)
168 TIGR00792 gph sugar (Glycoside 99.5 3.9E-13 8.5E-18 108.4 14.4 169 40-219 10-198 (437)
169 PRK09848 glucuronide transport 99.5 5.6E-13 1.2E-17 107.9 15.2 154 30-193 229-391 (448)
170 PRK10091 MFS transport protein 99.5 1.8E-12 3.8E-17 102.9 17.2 141 72-214 232-375 (382)
171 PRK09669 putative symporter Ya 99.5 1.7E-12 3.6E-17 105.0 17.3 116 78-193 267-391 (444)
172 COG0738 FucP Fucose permease [ 99.5 2.8E-12 6.1E-17 98.5 16.9 180 29-219 13-215 (422)
173 KOG0252 Inorganic phosphate tr 99.5 3.4E-13 7.4E-18 104.9 11.8 193 25-221 37-251 (538)
174 KOG2504 Monocarboxylate transp 99.5 1.7E-13 3.8E-18 111.3 10.7 175 29-214 298-475 (509)
175 KOG0255 Synaptic vesicle trans 99.5 6.6E-12 1.4E-16 103.6 20.2 196 17-231 309-508 (521)
176 TIGR02718 sider_RhtX_FptX side 99.5 4E-12 8.7E-17 101.1 18.1 177 31-218 3-187 (390)
177 TIGR00711 efflux_EmrB drug res 99.5 1.7E-12 3.8E-17 106.0 16.1 151 31-191 257-411 (485)
178 PRK10133 L-fucose transporter; 99.5 6.5E-12 1.4E-16 101.3 18.8 160 38-210 267-428 (438)
179 PRK08633 2-acyl-glycerophospho 99.5 9.9E-13 2.2E-17 117.7 15.5 157 40-206 243-401 (1146)
180 TIGR00710 efflux_Bcr_CflA drug 99.5 4.2E-12 9E-17 100.6 17.1 143 37-190 214-361 (385)
181 KOG2504 Monocarboxylate transp 99.5 1.1E-12 2.3E-17 106.7 13.9 167 38-216 55-222 (509)
182 KOG4686 Predicted sugar transp 99.5 2.1E-12 4.6E-17 94.9 13.7 154 27-192 262-416 (459)
183 PF13347 MFS_2: MFS/sugar tran 99.5 3.6E-12 7.8E-17 102.6 16.5 119 75-193 260-387 (428)
184 PRK10429 melibiose:sodium symp 99.5 3.4E-12 7.3E-17 104.0 16.4 154 29-193 231-396 (473)
185 PRK11102 bicyclomycin/multidru 99.5 7.2E-12 1.6E-16 99.1 17.6 113 72-185 227-344 (377)
186 COG2807 CynX Cyanate permease 99.5 6.5E-12 1.4E-16 95.3 15.8 180 20-214 202-384 (395)
187 PF06813 Nodulin-like: Nodulin 99.5 2.6E-12 5.6E-17 94.6 13.2 155 38-206 11-172 (250)
188 PRK14995 methyl viologen resis 99.5 3.6E-12 7.9E-17 104.4 15.5 150 31-190 261-413 (495)
189 TIGR00885 fucP L-fucose:H+ sym 99.4 2.5E-11 5.5E-16 97.1 18.5 162 34-207 237-404 (410)
190 PRK11195 lysophospholipid tran 99.4 2E-11 4.4E-16 97.2 16.8 142 71-214 237-379 (393)
191 PF07690 MFS_1: Major Facilita 99.4 2.6E-12 5.6E-17 100.4 11.5 138 34-181 211-352 (352)
192 KOG2532 Permease of the major 99.4 4.8E-12 1E-16 101.8 13.1 185 16-214 248-446 (466)
193 PRK11462 putative transporter; 99.4 3.4E-11 7.5E-16 97.7 17.7 117 77-193 265-390 (460)
194 TIGR00889 2A0110 nucleoside tr 99.4 2.2E-11 4.8E-16 97.7 15.9 140 72-219 35-183 (418)
195 PRK09669 putative symporter Ya 99.4 9.9E-12 2.1E-16 100.5 12.9 172 37-218 17-207 (444)
196 PRK06814 acylglycerophosphoeth 99.4 1.4E-11 3E-16 110.4 15.0 167 30-206 226-413 (1140)
197 COG2211 MelB Na+/melibiose sym 99.4 8.5E-11 1.8E-15 93.4 16.6 153 30-192 237-398 (467)
198 KOG0253 Synaptic vesicle trans 99.3 2.4E-11 5.2E-16 92.5 12.0 178 29-220 78-255 (528)
199 TIGR00788 fbt folate/biopterin 99.3 5.9E-11 1.3E-15 96.5 15.2 176 29-219 26-212 (468)
200 PRK10429 melibiose:sodium symp 99.3 5.9E-11 1.3E-15 96.8 15.2 174 35-218 12-204 (473)
201 COG0738 FucP Fucose permease [ 99.3 1.7E-10 3.6E-15 89.0 16.1 174 19-208 229-402 (422)
202 KOG2533 Permease of the major 99.3 5.1E-11 1.1E-15 96.3 12.1 161 27-197 271-438 (495)
203 TIGR00886 2A0108 nitrite extru 99.3 4.1E-11 8.9E-16 94.4 10.9 136 31-177 227-366 (366)
204 TIGR01301 GPH_sucrose GPH fami 99.3 3.1E-10 6.8E-15 91.6 15.8 200 19-220 246-476 (477)
205 PRK11462 putative transporter; 99.3 4E-10 8.7E-15 91.5 16.6 173 37-219 17-208 (460)
206 KOG3762 Predicted transporter 99.2 1E-10 2.2E-15 93.0 10.7 141 72-212 403-544 (618)
207 PF13347 MFS_2: MFS/sugar tran 99.2 4.1E-11 9E-16 96.5 8.4 146 72-217 34-200 (428)
208 PF03825 Nuc_H_symport: Nucleo 99.2 1.7E-09 3.7E-14 86.0 17.1 134 37-183 10-144 (400)
209 PF05631 DUF791: Protein of un 99.2 4E-09 8.6E-14 80.7 17.9 149 72-221 66-222 (354)
210 PRK11652 emrD multidrug resist 99.2 3E-09 6.6E-14 84.8 17.6 118 72-190 240-360 (394)
211 PF01306 LacY_symp: LacY proto 99.2 1.9E-10 4.2E-15 90.4 10.1 172 32-217 10-190 (412)
212 KOG2325 Predicted transporter/ 99.1 2.9E-10 6.3E-15 90.7 9.6 186 25-220 30-234 (488)
213 PRK15403 multidrug efflux syst 99.1 5.4E-09 1.2E-13 83.9 17.0 170 29-210 218-392 (413)
214 TIGR00788 fbt folate/biopterin 99.1 1.7E-10 3.6E-15 93.9 8.4 122 71-192 284-415 (468)
215 KOG2816 Predicted transporter 99.1 3E-09 6.6E-14 85.5 15.2 138 83-223 70-207 (463)
216 COG2807 CynX Cyanate permease 99.1 1.2E-08 2.5E-13 78.0 16.4 158 44-214 27-185 (395)
217 COG2211 MelB Na+/melibiose sym 99.0 1.5E-08 3.3E-13 80.7 15.1 177 33-219 16-211 (467)
218 TIGR00924 yjdL_sub1_fam amino 99.0 2.1E-08 4.6E-13 81.9 16.2 140 77-216 314-469 (475)
219 TIGR00926 2A1704 Peptide:H+ sy 99.0 1.7E-08 3.8E-13 84.6 15.6 142 72-213 20-180 (654)
220 PRK09848 glucuronide transport 99.0 2.8E-08 6.1E-13 80.6 15.8 139 37-185 16-172 (448)
221 KOG2563 Permease of the major 98.9 9.3E-08 2E-12 75.1 14.3 119 73-191 77-203 (480)
222 PRK09584 tppB putative tripept 98.9 6.7E-08 1.5E-12 79.4 13.9 137 77-213 318-477 (500)
223 KOG2563 Permease of the major 98.9 2.3E-08 4.9E-13 78.4 9.7 184 29-223 266-458 (480)
224 PRK10207 dipeptide/tripeptide 98.8 3.2E-07 6.9E-12 75.2 13.7 139 78-216 312-477 (489)
225 PF11700 ATG22: Vacuole efflux 98.7 1.5E-06 3.2E-11 70.8 16.6 144 77-220 72-252 (477)
226 COG0477 ProP Permeases of the 98.7 1.9E-06 4.1E-11 65.6 15.9 129 75-203 39-173 (338)
227 PF05978 UNC-93: Ion channel r 98.7 1.9E-06 4.1E-11 59.1 13.8 116 72-188 34-149 (156)
228 PF03092 BT1: BT1 family; Int 98.6 1.3E-06 2.8E-11 70.5 13.8 146 72-218 22-178 (433)
229 PF12832 MFS_1_like: MFS_1 lik 98.6 5.8E-07 1.3E-11 53.9 8.8 68 36-114 7-74 (77)
230 PF03209 PUCC: PUCC protein; 98.6 4.1E-06 8.9E-11 65.5 15.5 120 71-190 240-363 (403)
231 PF06609 TRI12: Fungal trichot 98.6 6E-06 1.3E-10 68.5 15.7 153 29-188 310-465 (599)
232 PF03209 PUCC: PUCC protein; 98.5 2.6E-06 5.7E-11 66.6 11.9 132 72-204 12-165 (403)
233 TIGR00769 AAA ADP/ATP carrier 98.5 8.5E-05 1.8E-09 60.3 19.7 153 26-188 4-189 (472)
234 PTZ00207 hypothetical protein; 98.4 1.8E-06 3.9E-11 71.7 9.8 180 28-219 352-556 (591)
235 KOG3764 Vesicular amine transp 98.4 8.7E-07 1.9E-11 68.7 7.3 138 75-212 306-451 (464)
236 KOG4686 Predicted sugar transp 98.3 1.5E-07 3.2E-12 69.9 0.4 120 72-191 76-199 (459)
237 TIGR00805 oat sodium-independe 98.3 2.7E-05 5.8E-10 66.0 13.0 152 29-190 330-581 (633)
238 TIGR01272 gluP glucose/galacto 98.2 8.8E-06 1.9E-10 62.9 9.0 95 125-219 7-118 (310)
239 PF06779 DUF1228: Protein of u 98.2 4.3E-05 9.4E-10 46.4 9.0 78 42-130 5-82 (85)
240 KOG2615 Permease of the major 98.1 2.3E-05 5E-10 60.8 9.0 121 70-190 292-414 (451)
241 PF01770 Folate_carrier: Reduc 98.1 0.00068 1.5E-08 53.9 16.7 142 72-214 37-181 (412)
242 PRK15462 dipeptide/tripeptide 98.1 0.00032 7E-09 57.5 15.0 111 77-187 310-437 (493)
243 KOG1330 Sugar transporter/spin 98.1 1.3E-05 2.8E-10 63.6 6.5 120 72-191 280-413 (493)
244 KOG3098 Uncharacterized conser 98.0 0.0003 6.5E-09 56.7 13.8 109 77-186 281-410 (461)
245 PF03137 OATP: Organic Anion T 98.0 6.5E-07 1.4E-11 73.9 -1.4 144 72-215 35-250 (539)
246 COG2270 Permeases of the major 98.0 0.00015 3.3E-09 57.1 11.3 145 75-219 58-224 (438)
247 PF00854 PTR2: POT family; In 98.0 7.4E-05 1.6E-09 59.3 9.4 109 106-214 2-122 (372)
248 KOG0637 Sucrose transporter an 97.9 3.2E-05 6.9E-10 61.3 5.7 154 21-185 24-200 (498)
249 KOG3626 Organic anion transpor 97.9 0.00015 3.3E-09 61.2 10.0 146 72-217 129-345 (735)
250 PF06963 FPN1: Ferroportin1 (F 97.9 0.0011 2.3E-08 53.5 14.3 125 47-182 276-410 (432)
251 PF03092 BT1: BT1 family; Int 97.9 0.00011 2.5E-09 59.4 8.8 123 70-192 250-382 (433)
252 KOG2816 Predicted transporter 97.8 0.00043 9.4E-09 56.3 11.7 120 70-190 272-392 (463)
253 PRK03612 spermidine synthase; 97.8 0.0099 2.2E-07 49.4 19.2 136 72-208 47-190 (521)
254 KOG3626 Organic anion transpor 97.7 0.0019 4.1E-08 54.9 14.0 152 29-190 392-649 (735)
255 PF03219 TLC: TLC ATP/ADP tran 97.7 0.009 2E-07 49.1 17.6 153 25-189 20-205 (491)
256 KOG3098 Uncharacterized conser 97.7 0.0023 5E-08 51.7 13.3 113 72-185 47-159 (461)
257 PF02487 CLN3: CLN3 protein; 97.6 0.0063 1.4E-07 48.5 14.2 133 78-216 62-196 (402)
258 KOG1237 H+/oligopeptide sympor 97.5 0.008 1.7E-07 50.4 15.1 177 25-212 33-242 (571)
259 PF02487 CLN3: CLN3 protein; 97.4 0.006 1.3E-07 48.6 11.9 111 75-187 281-394 (402)
260 PF06963 FPN1: Ferroportin1 (F 97.4 0.055 1.2E-06 43.8 18.4 138 76-214 39-199 (432)
261 KOG3574 Acetyl-CoA transporter 97.4 0.0029 6.3E-08 49.6 9.8 146 25-184 27-189 (510)
262 PF03137 OATP: Organic Anion T 97.3 5.1E-05 1.1E-09 62.9 0.0 152 30-191 306-515 (539)
263 COG3104 PTR2 Dipeptide/tripept 97.2 0.015 3.3E-07 47.2 12.9 141 77-217 326-489 (498)
264 KOG4332 Predicted sugar transp 96.9 0.0014 3E-08 49.0 3.9 152 72-224 69-229 (454)
265 COG3202 ATP/ADP translocase [E 96.8 0.2 4.2E-06 41.0 17.4 154 25-190 23-210 (509)
266 KOG3762 Predicted transporter 96.7 0.00096 2.1E-08 54.4 2.1 76 38-124 20-96 (618)
267 TIGR00806 rfc RFC reduced fola 96.7 0.022 4.8E-07 46.5 9.5 102 78-179 301-404 (511)
268 TIGR00939 2a57 Equilibrative N 96.4 0.028 6.1E-07 45.7 8.8 108 77-185 309-429 (437)
269 KOG2325 Predicted transporter/ 96.4 0.0024 5.2E-08 51.9 2.5 64 145-208 405-468 (488)
270 PF01770 Folate_carrier: Reduc 96.2 0.24 5.2E-06 39.8 12.4 126 40-173 258-385 (412)
271 KOG3097 Predicted membrane pro 95.7 0.45 9.8E-06 37.0 11.6 115 25-157 25-139 (390)
272 PF07672 MFS_Mycoplasma: Mycop 95.6 0.21 4.6E-06 37.3 9.3 97 80-176 146-254 (267)
273 KOG0637 Sucrose transporter an 95.3 0.071 1.5E-06 43.1 6.4 167 29-195 279-475 (498)
274 KOG3574 Acetyl-CoA transporter 94.6 0.29 6.3E-06 38.9 8.0 58 136-193 377-434 (510)
275 PF01733 Nucleoside_tran: Nucl 93.9 0.018 3.9E-07 44.6 0.2 104 80-184 187-304 (309)
276 KOG4332 Predicted sugar transp 93.7 0.55 1.2E-05 35.7 7.6 133 78-210 285-426 (454)
277 KOG3880 Predicted small molecu 93.4 0.14 3E-06 39.4 4.1 180 31-217 14-201 (409)
278 PF13000 Acatn: Acetyl-coenzym 93.3 0.53 1.1E-05 38.8 7.4 40 148-187 138-177 (544)
279 PF13000 Acatn: Acetyl-coenzym 93.2 3.6 7.7E-05 34.2 11.8 56 136-191 413-468 (544)
280 KOG1479 Nucleoside transporter 92.9 0.33 7.1E-06 38.8 5.7 103 78-182 285-397 (406)
281 KOG3810 Micronutrient transpor 92.7 0.71 1.5E-05 36.3 7.1 162 40-213 245-419 (433)
282 KOG1479 Nucleoside transporter 90.3 8.4 0.00018 31.2 13.2 28 32-59 21-48 (406)
283 TIGR00939 2a57 Equilibrative N 88.8 12 0.00026 30.8 12.0 32 128-160 106-137 (437)
284 KOG3810 Micronutrient transpor 88.3 1.2 2.6E-05 35.1 4.8 99 90-189 57-155 (433)
285 PRK10263 DNA translocase FtsK; 87.6 25 0.00055 33.1 14.3 23 83-105 60-82 (1355)
286 COG5336 Uncharacterized protei 82.3 9.4 0.0002 24.3 5.8 32 81-112 48-80 (116)
287 PF11947 DUF3464: Protein of u 82.1 7 0.00015 26.8 5.8 35 144-178 110-144 (153)
288 PF02990 EMP70: Endomembrane p 80.7 19 0.00042 30.4 9.1 24 81-104 303-326 (521)
289 TIGR00880 2_A_01_02 Multidrug 80.5 13 0.00028 24.0 10.5 41 77-117 89-129 (141)
290 COG5336 Uncharacterized protei 79.7 10 0.00022 24.2 5.4 34 158-191 36-69 (116)
291 COG1230 CzcD Co/Zn/Cd efflux s 78.3 29 0.00063 26.9 10.4 22 102-123 84-105 (296)
292 TIGR00769 AAA ADP/ATP carrier 76.9 43 0.00092 28.0 19.4 71 136-206 274-345 (472)
293 KOG3880 Predicted small molecu 76.4 11 0.00024 29.5 5.9 63 122-184 336-398 (409)
294 COG2274 SunT ABC-type bacterio 75.1 60 0.0013 28.8 13.5 27 76-102 158-184 (709)
295 KOG2601 Iron transporter [Inor 73.2 49 0.0011 26.9 14.7 129 78-206 66-217 (503)
296 PF02694 UPF0060: Uncharacteri 72.3 7.8 0.00017 24.7 3.5 50 75-124 54-103 (107)
297 PF12832 MFS_1_like: MFS_1 lik 72.0 18 0.00039 21.5 6.2 58 142-202 16-73 (77)
298 PF13536 EmrE: Multidrug resis 71.4 24 0.00052 22.6 8.8 19 100-118 84-102 (113)
299 COG4262 Predicted spermidine s 66.1 69 0.0015 25.8 13.9 114 72-187 40-162 (508)
300 PF03219 TLC: TLC ATP/ADP tran 66.1 80 0.0017 26.6 20.7 71 137-207 291-362 (491)
301 KOG4830 Predicted sugar transp 64.6 6.7 0.00014 29.9 2.5 36 72-107 49-93 (412)
302 KOG1278 Endosomal membrane pro 64.2 7.8 0.00017 32.5 3.0 31 72-102 356-386 (628)
303 COG1268 BioY Uncharacterized c 63.2 49 0.0011 23.6 6.5 21 84-104 91-111 (184)
304 COG2119 Predicted membrane pro 60.8 49 0.0011 23.6 6.0 39 83-121 142-180 (190)
305 TIGR00836 amt ammonium transpo 60.3 86 0.0019 25.6 8.2 17 89-105 236-252 (403)
306 COG0861 TerC Membrane protein 60.0 74 0.0016 24.1 8.1 60 131-190 19-78 (254)
307 PRK02237 hypothetical protein; 59.6 44 0.00096 21.4 6.9 50 75-124 56-105 (109)
308 KOG1237 H+/oligopeptide sympor 56.2 52 0.0011 28.3 6.7 63 129-191 459-521 (571)
309 PF10183 ESSS: ESSS subunit of 54.6 18 0.0004 23.1 3.0 35 187-221 53-87 (105)
310 KOG1277 Endosomal membrane pro 50.3 1.5E+02 0.0033 24.8 10.9 26 80-105 332-358 (593)
311 PF11511 RhodobacterPufX: Intr 47.7 54 0.0012 18.9 4.8 33 189-221 26-58 (67)
312 TIGR01666 YCCS hypothetical me 46.8 2.1E+02 0.0046 25.5 9.3 48 95-142 43-95 (704)
313 TIGR01667 YCCS_YHJK integral m 45.3 2.3E+02 0.0049 25.3 9.7 48 95-142 43-95 (701)
314 PF09605 Trep_Strep: Hypotheti 43.9 60 0.0013 23.2 4.5 28 79-106 156-183 (186)
315 PF04281 Tom22: Mitochondrial 43.7 26 0.00057 23.6 2.5 22 153-174 60-81 (137)
316 PF09527 ATPase_gene1: Putativ 43.4 55 0.0012 17.8 6.3 30 85-114 10-40 (55)
317 PF06912 DUF1275: Protein of u 42.2 1.3E+02 0.0028 21.7 15.0 34 169-203 167-200 (209)
318 PF04226 Transgly_assoc: Trans 38.9 64 0.0014 17.2 3.8 13 179-191 6-18 (48)
319 PF13493 DUF4118: Domain of un 38.6 45 0.00098 20.9 3.0 22 84-105 84-105 (105)
320 PF02632 BioY: BioY family; I 37.8 1.3E+02 0.0029 20.6 6.5 23 84-106 62-84 (148)
321 KOG2765 Predicted membrane pro 37.7 1.1E+02 0.0023 24.8 5.2 19 99-117 208-226 (416)
322 COG1972 NupC Nucleoside permea 37.3 1.4E+02 0.003 24.2 5.8 66 153-222 154-221 (404)
323 PF07857 DUF1632: CEO family ( 37.2 1.4E+02 0.0029 22.8 5.6 23 158-180 73-95 (254)
324 PF11085 YqhR: Conserved membr 36.5 1.5E+02 0.0033 20.9 11.6 37 84-120 77-114 (173)
325 PF06645 SPC12: Microsomal sig 35.7 98 0.0021 18.4 6.8 6 154-159 64-69 (76)
326 COG2962 RarD Predicted permeas 35.5 2.1E+02 0.0046 22.2 9.0 28 97-124 119-146 (293)
327 PF03741 TerC: Integral membra 35.1 1.7E+02 0.0036 20.9 6.5 48 143-190 11-58 (183)
328 TIGR03732 lanti_perm_MutE lant 34.6 1.9E+02 0.0042 21.5 11.2 38 80-117 128-165 (241)
329 PF01914 MarC: MarC family int 34.6 1.8E+02 0.0039 21.1 9.2 56 153-208 27-83 (203)
330 PF13940 Ldr_toxin: Toxin Ldr, 34.3 62 0.0013 15.7 2.6 19 83-101 16-34 (35)
331 PF03547 Mem_trans: Membrane t 33.7 2.5E+02 0.0054 22.5 10.3 17 86-102 6-22 (385)
332 PF07672 MFS_Mycoplasma: Mycop 33.3 49 0.0011 25.2 2.8 54 161-214 3-61 (267)
333 PF05297 Herpes_LMP1: Herpesvi 32.9 14 0.00031 28.1 0.0 12 208-219 178-189 (381)
334 PF11299 DUF3100: Protein of u 32.4 23 0.00051 26.2 1.0 50 134-184 177-226 (241)
335 KOG3097 Predicted membrane pro 32.3 2.1E+02 0.0046 23.0 6.0 47 74-120 309-355 (390)
336 PF09605 Trep_Strep: Hypotheti 31.9 1.9E+02 0.0042 20.6 12.9 43 81-123 34-76 (186)
337 PRK10666 ammonium transporter; 31.9 3E+02 0.0065 22.9 10.5 16 91-106 262-277 (428)
338 PF04341 DUF485: Protein of un 30.9 1.3E+02 0.0029 18.5 7.6 39 19-58 7-45 (91)
339 PF08551 DUF1751: Eukaryotic i 30.9 1.4E+02 0.003 18.8 6.0 36 85-120 24-60 (99)
340 PRK04949 putative sulfate tran 30.9 2.4E+02 0.0052 21.4 8.1 21 82-102 89-109 (251)
341 PF05545 FixQ: Cbb3-type cytoc 30.2 57 0.0012 17.3 2.1 11 208-218 24-34 (49)
342 PRK10692 hypothetical protein; 30.1 1.4E+02 0.0029 18.4 4.5 20 104-123 3-22 (92)
343 COG4708 Predicted membrane pro 30.1 91 0.002 21.2 3.3 24 83-106 142-165 (169)
344 PF12263 DUF3611: Protein of u 30.0 2.1E+02 0.0046 20.5 6.2 31 75-105 55-85 (183)
345 PF11023 DUF2614: Protein of u 29.9 1.6E+02 0.0035 19.1 5.4 8 100-107 6-13 (114)
346 COG3086 RseC Positive regulato 29.1 1.9E+02 0.0042 19.8 7.0 41 70-110 67-107 (150)
347 TIGR03644 marine_trans_1 proba 29.0 3.3E+02 0.0071 22.4 10.9 14 89-102 250-263 (404)
348 PF04474 DUF554: Protein of un 28.8 2.5E+02 0.0053 21.0 5.7 56 86-142 13-68 (226)
349 PF06898 YqfD: Putative stage 28.7 93 0.002 25.2 3.9 29 96-124 78-106 (385)
350 PF15192 TMEM213: TMEM213 fami 28.5 76 0.0016 18.6 2.4 16 184-199 45-60 (82)
351 PRK10995 inner membrane protei 28.0 2.5E+02 0.0054 20.7 8.8 33 179-211 57-90 (221)
352 TIGR00267 conserved hypothetic 27.4 2.2E+02 0.0048 20.0 10.9 23 86-108 124-146 (169)
353 PF13491 DUF4117: Domain of un 26.6 2.2E+02 0.0048 19.6 11.8 37 174-210 121-157 (171)
354 PF01925 TauE: Sulfite exporte 26.3 2.6E+02 0.0057 20.5 6.6 21 85-105 203-223 (240)
355 PHA03231 glycoprotein BALF4; P 26.2 1.2E+02 0.0027 27.3 4.3 23 166-188 676-698 (829)
356 COG1742 Uncharacterized conser 26.1 58 0.0013 20.7 1.8 44 76-119 56-99 (109)
357 PF06813 Nodulin-like: Nodulin 26.0 2.1E+02 0.0046 21.6 5.1 23 182-204 54-76 (250)
358 PRK03818 putative transporter; 26.0 4.3E+02 0.0094 22.8 10.0 35 145-179 505-540 (552)
359 TIGR02876 spore_yqfD sporulati 25.9 1E+02 0.0023 24.9 3.7 29 96-124 75-103 (382)
360 PF14012 DUF4229: Protein of u 25.4 1.2E+02 0.0027 17.6 3.0 15 205-219 41-55 (69)
361 PF11283 DUF3084: Protein of u 25.2 1.6E+02 0.0036 17.7 3.5 13 96-108 21-33 (79)
362 PF10762 DUF2583: Protein of u 25.1 1.7E+02 0.0037 17.8 3.9 19 104-122 3-21 (89)
363 TIGR02230 ATPase_gene1 F0F1-AT 24.9 1.9E+02 0.0042 18.4 6.2 24 90-113 57-81 (100)
364 PTZ00370 STEVOR; Provisional 24.6 3.4E+02 0.0073 21.1 7.1 13 209-221 272-284 (296)
365 TIGR03716 R_switched_YkoY inte 23.4 3.1E+02 0.0068 20.2 6.1 44 146-189 11-54 (215)
366 TIGR02185 Trep_Strep conserved 23.1 2.9E+02 0.0063 19.8 10.4 42 81-122 36-77 (189)
367 PRK02935 hypothetical protein; 23.0 2.2E+02 0.0047 18.3 5.5 10 99-108 6-15 (110)
368 COG2095 MarC Multiple antibiot 22.5 3.2E+02 0.0068 20.0 7.4 66 149-214 26-92 (203)
369 TIGR03173 pbuX xanthine permea 22.3 4.4E+02 0.0094 21.5 7.2 39 72-110 25-63 (406)
370 KOG4473 Uncharacterized membra 22.3 3E+02 0.0065 20.4 4.9 37 158-194 158-194 (247)
371 COG0534 NorM Na+-driven multid 22.2 4.6E+02 0.01 21.8 14.3 22 84-105 66-87 (455)
372 COG1079 Uncharacterized ABC-ty 22.1 4E+02 0.0086 21.0 7.6 95 86-187 18-117 (304)
373 PF08080 zf-RNPHF: RNPHF zinc 21.8 30 0.00066 17.0 0.0 9 99-107 3-11 (36)
374 PRK10255 PTS system N-acetyl g 21.8 5.5E+02 0.012 22.8 7.3 39 86-124 99-150 (648)
375 TIGR03802 Asp_Ala_antiprt aspa 21.4 5.4E+02 0.012 22.3 9.2 98 76-175 451-549 (562)
376 PF00909 Ammonium_transp: Ammo 21.2 4.6E+02 0.01 21.4 10.7 29 94-122 236-265 (399)
377 cd01324 cbb3_Oxidase_CcoQ Cyto 21.1 1.3E+02 0.0027 16.1 2.3 14 208-221 25-38 (48)
378 PF06826 Asp-Al_Ex: Predicted 21.0 3.1E+02 0.0067 19.3 9.5 102 75-178 56-161 (169)
379 PF08566 Pam17: Mitochondrial 20.9 3.2E+02 0.0069 19.4 7.3 9 16-24 24-32 (173)
380 TIGR00986 3a0801s05tom22 mitoc 20.9 2E+02 0.0044 19.6 3.6 22 153-174 58-79 (145)
381 TIGR00427 membrane protein, Ma 20.6 3.4E+02 0.0075 19.7 8.1 55 153-207 30-85 (201)
382 COG3162 Predicted membrane pro 20.4 2.4E+02 0.0052 17.9 7.3 40 16-56 12-51 (102)
383 PF06027 DUF914: Eukaryotic pr 20.2 4.6E+02 0.0099 21.0 11.5 13 91-103 183-195 (334)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.90 E-value=3.2e-22 Score=167.48 Aligned_cols=145 Identities=25% Similarity=0.342 Sum_probs=121.6
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccc
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEI 156 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~ 156 (232)
......+..++.+++.++.|+++||+|||++++++.++.+++.+++.+.++...+++..++.+++.++.++..+++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677899999999999999999999999999999999888888776666666667777877778888999999999
Q ss_pred cccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 026854 157 YPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGREL 223 (232)
Q Consensus 157 ~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 223 (232)
+|++.|++++|+.+..+++|++++|.+++.+.+. +...++++.+++.++++++.++ +|||+++.+
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~~~~l 741 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTRGQVL 741 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCccccc
Confidence 9999999999999999999999999999988775 4556777777777776666554 499987653
No 2
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=2.6e-22 Score=150.86 Aligned_cols=208 Identities=40% Similarity=0.695 Sum_probs=173.1
Q ss_pred ccccchhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC------ccccc---cCCCCchhhHHHHHHH
Q 026854 14 SGFSSFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCG------SKVLH---ADKSKDNSLYVDVFIT 84 (232)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~ 84 (232)
+.+.+..+++.++.+|..+.++..++.+.+.+|+.......+.+....|. +...+ +-..+...-..-..+.
T Consensus 311 e~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllit 390 (528)
T KOG0253|consen 311 EVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLIT 390 (528)
T ss_pred ccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHH
Confidence 34556778888899999999999999999999999988887776554333 11111 1123334445667778
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhh
Q 026854 85 SFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTT 164 (232)
Q Consensus 85 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~ 164 (232)
.+..++|.++.+++.||+|||+.+....++++++.++.....+.....+..+...++..+.+.+.|+|.+|++|+..|++
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 89999999999999999999999999999999999999998777777788888888888999999999999999999999
Q ss_pred hhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 026854 165 GAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGREL 223 (232)
Q Consensus 165 ~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 223 (232)
+.|.+....++|+++.|+++ +........+..++..+++++++...++.-|||+|..
T Consensus 471 gvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999999999999999998 4444456678888999999999999999889998864
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.90 E-value=8e-22 Score=157.42 Aligned_cols=184 Identities=13% Similarity=0.063 Sum_probs=160.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
..++.+..+++.+++............|.+.++++ .+..+.++..+...++..++.++.|++.||+|||
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~-----------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r 73 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLG-----------LSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR 73 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcC-----------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH
Confidence 34566667777777777878888888887777766 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+++..+.++..++.....+.++.+.+++.+++.|++.+...+....+++|++|+++|+++.++.+....+|..+++.+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 74 RWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888899999999999999999988888899999999999999999999999999999999999
Q ss_pred HHhh------ccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 186 GLVT------SCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 186 ~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
++.+ ..||+..|.+.++..++..++.+++.||+++
T Consensus 154 ~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 154 YILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 8874 3589999999888877766666677788764
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.3e-21 Score=153.72 Aligned_cols=205 Identities=19% Similarity=0.254 Sum_probs=162.8
Q ss_pred cccchhhhcch-hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHH
Q 026854 15 GFSSFFTLFSR-KLIRTTVLLWVLFFANA-FSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGL 92 (232)
Q Consensus 15 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (232)
++.++++++++ ..++.....+...++.. .+.+....|...+.++.| .+..++.+.....++...+.+
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG-----------~~~~~a~~an~~~g~v~~~~t 322 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAG-----------FTPEEAQYANLGIGIVNLLST 322 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHH
Confidence 45567888874 45555555555555444 355666777787887776 889999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh----hh--HHHH---HHHHHHHH-HHHhhhhhhhhhccccccccchh
Q 026854 93 ILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH----QS--AVVT---TVLLFGVR-MCATGTITVATIYAPEIYPTSAR 162 (232)
Q Consensus 93 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~~--~~~~---~~~~~~~g-~~~~~~~~~~~~~~~e~~p~~~r 162 (232)
+++.++.||+|||++++.+..++.+..+.+... .. .|.- .+..++.. .+.-+..|+.+-+.+|++|++.|
T Consensus 323 ~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R 402 (485)
T KOG0569|consen 323 LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR 402 (485)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch
Confidence 999999999999999999999999888777651 11 1221 22222222 23445679999999999999999
Q ss_pred hhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCchhhHHhhh
Q 026854 163 TTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGRELKDAVDAIE 231 (232)
Q Consensus 163 ~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 231 (232)
+.+.++.....++..++....++.+.+..|. ..|..+.+.+.+..+..++.+||||+|+.+|..++.+
T Consensus 403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 9999999999999999999999999999887 6888889999999999999999999999888766644
No 5
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=4.6e-21 Score=147.91 Aligned_cols=181 Identities=12% Similarity=0.042 Sum_probs=171.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
+..+...+.+.+..|+....-+.....+|.+.+|++ .+...+++..+.+.++..+++++...+.||+.|
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~-----------vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~R 77 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLG-----------VSEGAAGQLITAYALGVALGAPLLALLTGRLER 77 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 445667777888888888888888889999998887 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 105 KLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
|++++....++.++.++..+++|++.+.+.+++.++..|.++++..+..+++.|+++|++++++.+....++..+|..++
T Consensus 78 r~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLG 157 (394)
T COG2814 78 RRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLG 157 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 026854 185 VGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 185 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 216 (232)
.++-|.+||+.+|+..+.+.++..+..+..+|
T Consensus 158 t~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 158 TFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999988888888
No 6
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.88 E-value=6.8e-21 Score=151.25 Aligned_cols=184 Identities=12% Similarity=0.030 Sum_probs=155.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
++.|+.+..+.+..++.....|......|.+.++.+ .+..+.++..+...++..++.++.|+++||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~gr 84 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLG-----------ISEGVAGQSVTVTAFVAMFASLFITQTIQATDR 84 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 345565555555555555555566566787877766 888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 105 KLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
|+.+..+..+.+++.+.....++.+.+++.+++.|++.+...+...+++.|++|+++|+++.++.....++|..++|.++
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~ 164 (394)
T PRK10213 85 RYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLG 164 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888999999999999999998999999999999999999999999999999999999999
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 185 VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 185 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.+.+..||+..+++.+++.++..+......||++
T Consensus 165 ~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999998887766665555544456654
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.88 E-value=6.7e-21 Score=151.22 Aligned_cols=179 Identities=9% Similarity=0.017 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
..+.+.+..+......+......|.+.++++ .+..+.++..+...++..++.++.|+++||+|||+++.
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 78 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQSFH-----------MQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLI 78 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHhHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 3444444444433344444455788887766 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh
Q 026854 110 LMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 189 (232)
.+..+.+++.+...+.++.+.+.+.+++.|++.+...+...+++.|++|+++|+++.|+......+|..++|.+.+.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 79 GLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999998888899999999999999988888888889999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 190 SCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
..||+..+++.+++.++..+..+...||.+
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999988887777666555556543
No 8
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.88 E-value=2.7e-21 Score=158.09 Aligned_cols=199 Identities=20% Similarity=0.313 Sum_probs=135.4
Q ss_pred chhhhcch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchh------------hHHHH
Q 026854 18 SFFTLFSR----KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNS------------LYVDV 81 (232)
Q Consensus 18 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 81 (232)
++++++++ ++++.++.....+++..+.+|+...|.|.+.++.+ .+..+ .....
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G-----------~~~~~~~~~~~~~~~~~~~~~~ 341 (502)
T TIGR00887 273 SWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG-----------YSPPAATNNAYEELYKTAVGNL 341 (502)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHc-----------CCCCccchhHHHHHHHHHHHHH
Confidence 46666642 22233444445556666777888888898886655 22111 11123
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHhhhhhhhhhcccccc
Q 026854 82 FITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQS----AVVTTVLLFGVRMCATGTITVATIYAPEIY 157 (232)
Q Consensus 82 ~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 157 (232)
.+..++.+++.++.++++||+|||++++++..++.++...+....+ ........+...++..+..+..+.+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3445667788899999999999999998888777776665554221 111111111222223345677888899999
Q ss_pred ccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc----------chhHHHHHHHHHHHHHHHHHhcccccccCCCchhhH
Q 026854 158 PTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC----------HLRLAVILFEVVFVLAIASSLLFPFETKGRELKDAV 227 (232)
Q Consensus 158 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 227 (232)
|++.|+++.|+.+..++++++++|.+.+++.+.. +....+.+++++.+++.+.. +++|||+++++||.+
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhh
Confidence 9999999999999999999999999999998742 34557777877777766654 566999999887754
Q ss_pred H
Q 026854 228 D 228 (232)
Q Consensus 228 ~ 228 (232)
+
T Consensus 501 ~ 501 (502)
T TIGR00887 501 G 501 (502)
T ss_pred C
Confidence 4
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=7.4e-22 Score=151.08 Aligned_cols=189 Identities=14% Similarity=0.082 Sum_probs=169.2
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHH
Q 026854 20 FTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIV 99 (232)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 99 (232)
++..++.+++.++..++.+.+..+..-.+..-.|.+.++.+ .|.++.+...+...+...++.++.|.++
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~-----------lsk~~lG~i~s~f~i~YG~sKf~~G~~s 88 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGG-----------LSKTQLGILGSAFSITYGVSKFVMGVLS 88 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcC-----------CCHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 33443444455666666677777777788888999988776 9999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch
Q 026854 100 DKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 100 dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
||.+.|..+.++.+++++..+++.+.++.+.+.++..+.|.+++..+|.+...++.++|+++||+..++.+...++|+.+
T Consensus 89 Dr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal 168 (448)
T COG2271 89 DRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL 168 (448)
T ss_pred ccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHH--HHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 180 CPLVA--VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 180 ~~~i~--~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.|.+. +++.++.+|+..|++-+++.++.+++.++..++++
T Consensus 169 ~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 169 APLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999 89999889999999999999988888887776654
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.87 E-value=6.5e-21 Score=153.25 Aligned_cols=178 Identities=11% Similarity=0.055 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
.....++.+++..+..+....+.|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~ 92 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLG-----------LSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMG 92 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcC-----------CCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHH
Confidence 3344455555666666677788898887776 88899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh
Q 026854 110 LMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 189 (232)
++.++..++.+.....++.+.+.+.+++.+++.+...+....+++|++|+++|++++++.+....+|+.++|.+.+++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 93 IGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888888888888889999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 190 SCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
..||+..+.+.++..++..+...+..||+
T Consensus 173 ~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 173 HYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999888776665544444444554
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.87 E-value=1.1e-20 Score=149.65 Aligned_cols=182 Identities=15% Similarity=0.125 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+..+......+.............|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 73 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLS-----------TPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL 73 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH
Confidence 33333434444444454555556677776665 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 109 VLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
..+..+..++.+.....++.+...+.+++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 153 (385)
T TIGR00710 74 LLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL 153 (385)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888889999999988888999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 189 TSCHLRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
+..+|+..+++.++...+..+..+...||++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 154 VWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999888887777766666666776543
No 12
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.87 E-value=3.1e-20 Score=147.85 Aligned_cols=183 Identities=16% Similarity=0.169 Sum_probs=156.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
+.+++.+...++.++...+..+......|.+.++.+ .+..+.++..+...++..++.++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~ 76 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFG-----------LTTVDAASLISAALISRWFGALMFGLWGDRYGR 76 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 456677777788888888888888888898887776 888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 105 KLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
|+++..+..+..++.+...+.++.+.+.+.+++.|++.+...+...+++.|.+|+++|+++.++.+....+|..+++.+.
T Consensus 77 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 77 RLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888899999999999888899999999999999999999999999999999999999
Q ss_pred HHHhhccc--hhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 185 VGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 185 ~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.+.+..+ |+..+.+.++..++. +......||++
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 99888766 888777655444443 33344456654
No 13
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.87 E-value=2.6e-20 Score=152.08 Aligned_cols=182 Identities=17% Similarity=0.109 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
+..+..+++..+.............|.+.++++ .+..+.++..+.+.++...+.++.|+++||+|||+.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~-----------~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~ 73 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLG-----------ASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL 73 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 345566677777788888888888999998776 788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcccccc-ccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 108 MVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIY-PTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
++.+..+..++.+.....++.+.+++.+.+.|++.+...+.....+.+.+ |+++|+++.|+......+|..++|.++++
T Consensus 74 l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 74 LMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888887777776665 77999999999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 187 LVTSCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 187 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
+.++.||++.|++...+..+..++..+..||.++
T Consensus 154 l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 154 LLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999998887777776666666676543
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.86 E-value=1.8e-20 Score=149.44 Aligned_cols=183 Identities=15% Similarity=0.129 Sum_probs=156.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
+++..+...+...+...+..+......|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 80 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFG-----------LDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK 80 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34445555666667777777777888888887766 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+++..+..+..++.+.....++.+.+.+.+++.|++.+...+...+++.|.+|+++|+++.++.+....+|..+++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 81 RILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888877778888888899999999988888999999999999999999999999999999999999998
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 186 GLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 186 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.+.+..+|+..+++.+++..+..+....+.||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 161 LAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 8888889998888877766666555555567754
No 15
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.86 E-value=4.6e-20 Score=144.13 Aligned_cols=172 Identities=16% Similarity=0.168 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHH
Q 026854 36 VLFFANAFSYYGAVLLTS-KLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVL 114 (232)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 114 (232)
+..+.............| .+.++.+ .+..+.++..+...++..++.++.|+++||+|||+++..+..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~ 71 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELG-----------LSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLL 71 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCST-----------TTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhh
Confidence 345555556666666677 5666655 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchh
Q 026854 115 ACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLR 194 (232)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~ 194 (232)
.+++.+...+.++.+.+.+.+++.|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+.+..+|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~ 151 (352)
T PF07690_consen 72 FALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWR 151 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHC
T ss_pred hhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccc
Confidence 99985555555666688889999999999999999999999999999999999999999999999999999999888999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccc
Q 026854 195 LAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
..+++.++..++..++...+.+++
T Consensus 152 ~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 152 WAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC---
T ss_pred cccccccchhhhhhhhHhhhhhhc
Confidence 999999988888877544444443
No 16
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=3.4e-20 Score=149.87 Aligned_cols=207 Identities=15% Similarity=0.061 Sum_probs=145.0
Q ss_pred CchhhhhhhhhhcccccchhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHH
Q 026854 1 MISMTRKITDKLKSGFSSFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVD 80 (232)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (232)
|++..++...+.+-+....+.++++..|+.+...++...........+....|.+.++ + .+..+.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g-----------~s~~~~g~~ 68 (452)
T PRK11273 1 MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-----------FSRGDLGFA 68 (452)
T ss_pred CcccccCCcCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-C-----------CCHHHHHHH
Confidence 3444444444443344444445533333322223333333333334455667766644 5 888999999
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHhhhhhhhhhccccc
Q 026854 81 VFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH----QSAVVTTVLLFGVRMCATGTITVATIYAPEI 156 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~ 156 (232)
.+...++..++.++.|+++||+|||++++.+..+.++..+...+. .+.+...+.+++.|++.+...+.....+.|+
T Consensus 69 ~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~ 148 (452)
T PRK11273 69 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW 148 (452)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHh
Confidence 999999999999999999999999999999999888888777664 2566677778888888887777777788999
Q ss_pred cccchhhhhhHHHHHhhhhhhch-hHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 157 YPTSARTTGAGVASAVGRVGGMV-CPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 157 ~p~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+|+++|++++++.+....+|+.+ +|.+...+....+|+..+++.++...+..++..++.||++
T Consensus 149 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 149 WSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred CChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 99999999999998888888644 5544333333448998888887777766666666656653
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.86 E-value=4.9e-20 Score=145.91 Aligned_cols=181 Identities=12% Similarity=0.076 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+..+...+..+......+......|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~ 71 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVG-----------ISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL 71 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcC-----------CCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH
Confidence 34455566666666666677777888887776 8888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 109 VLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
..+..+.+++.+...+.++.+.+++.+++.|++.+...+.....+.|++|+++|+++.++......++..++|.+.+++.
T Consensus 72 ~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 72 LFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 99999999999988889999999999999999988888888888999999999999999999888999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 189 TSCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
+..+|+..+.+.++...+..+..+...||.++
T Consensus 152 ~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 152 QEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 98999999999888777666665666677543
No 18
>PRK10504 putative transporter; Provisional
Probab=99.86 E-value=7.7e-20 Score=148.58 Aligned_cols=181 Identities=11% Similarity=0.049 Sum_probs=156.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
.++.++.+.+..++.....+....+.|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~ 76 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLG-----------ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN 76 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC-----------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 4556677777788888888888889999998776 88888888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 107 SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
+++.+..+..++.+.....++.+.+.+.+++.|++.+...+...+++.|.+|+++|+++.++.+...++|..++|.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 77 IFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999888888877777777888888899999999998889999999999999999999999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 187 LVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 187 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+.+..||++.|.+......+..+......|+.
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999887777666666665555554
No 19
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.86 E-value=8.8e-20 Score=148.79 Aligned_cols=194 Identities=18% Similarity=0.196 Sum_probs=135.0
Q ss_pred chhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHH
Q 026854 18 SFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAI 97 (232)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (232)
++++++++ +++.+.......++....+|....|.|.+.++.. +.+..+..+......++..++.++.|+
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~ 308 (490)
T PRK10642 240 SFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNL----------HYSEDHGVLIIIAIMIGMLFVQPVMGL 308 (490)
T ss_pred CHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566643 4454544444455566778888889999885432 266666667777778889999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHH-HH--hhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhh
Q 026854 98 IVDKIGRKLSMVLMFVLACIFLLP-LV--FHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 174 (232)
Q Consensus 98 l~dr~grr~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 174 (232)
++||+|||+.+..+.....+.... .. ..++...+.+..++.+++.+...+....+.+|.+|++.|+++.|+.+..+.
T Consensus 309 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~ 388 (490)
T PRK10642 309 LSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV 388 (490)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH
Confidence 999999999888777654433322 21 123344455556666666666667777888899999999999999888888
Q ss_pred hhhchhHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 026854 175 VGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFPFETKGREL 223 (232)
Q Consensus 175 ~g~~~~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 223 (232)
+++.++|.+.+++.+..+ ++.++++..+..+++.+..+ +.||++++..
T Consensus 389 ~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~~~ 437 (490)
T PRK10642 389 LVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCCCC
Confidence 888899999999988654 45555555555555554444 4589876544
No 20
>PRK10054 putative transporter; Provisional
Probab=99.86 E-value=6.8e-20 Score=145.59 Aligned_cols=178 Identities=12% Similarity=0.062 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
|..+.+....++.....+....+.|.+.+ +.+ .+..+.++..+...++..+++++.|+++||+|||++
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g-----------~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~ 75 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYS-----------LSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY 75 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Confidence 44556666777777777777777777774 344 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 108 MVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
+.++.....++.+...+.++.+...+.+.+.+...+...+....+.+|..|+++|+++.++.+...++|..++|.+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 76 MLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888887777778777766666666666666778889999999999999999999999999999999999988
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 188 VTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 188 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
.+ .+|+..+.+.+++.++..+...++.||+
T Consensus 156 ~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 156 VM-QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HH-hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 75 6899888887777776655555544554
No 21
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.86 E-value=7.3e-20 Score=153.46 Aligned_cols=180 Identities=15% Similarity=0.147 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
|+.++.+.+..+...+....+...+|.+..+.+ .+..+.++..+...++.+++.+++|+++||+|||+.
T Consensus 166 ~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~g-----------ls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~ 234 (742)
T TIGR01299 166 WALFFVLGLALMADGVEVFVVGFVLPSAEKDLC-----------IPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQC 234 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 333333444444444444556667787776665 788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 108 MVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
++++.++.+++.++..+.++.+.+++.+++.|++.++..+...++++|.+|++.|++..++......+|.++++.++..+
T Consensus 235 lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 235 LLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888999999999999999999999999999999999999999999999999999999888776
Q ss_pred hhcc-------------chhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 188 VTSC-------------HLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 188 ~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.... +|+..+++.++. .+..++..+++||++
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp-~ll~ll~~~~lPESP 358 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFP-CVFAIGALTFMPESP 358 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHH-HHHHHHHHHHcCCCH
Confidence 6543 466655554444 444445556678874
No 22
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.85 E-value=8.9e-20 Score=149.13 Aligned_cols=190 Identities=15% Similarity=0.158 Sum_probs=158.2
Q ss_pred cchhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHH
Q 026854 17 SSFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSA 96 (232)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 96 (232)
.+..+..++.+++.+..+++.++...+..+......|.+.++.+ .+..+.++..+...++..++.++.|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~g 76 (496)
T PRK03893 8 IPWYRHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFG-----------LTTVQAASLISAAFISRWFGGLLLG 76 (496)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666677777777778777887788888888877665 8888899999999999999999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhh
Q 026854 97 IIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVG 176 (232)
Q Consensus 97 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 176 (232)
+++||+|||+.+..+..+.+++.+...+.++.+.+.+.+++.|++.+...+....++.|.+|+++|+++.++......+|
T Consensus 77 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 156 (496)
T PRK03893 77 AMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIG 156 (496)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888888888889999999999988888999999999999999999999999999999
Q ss_pred hchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 177 GMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 177 ~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
..++|.+.+.+.+..+|+..+.+......+ .+......||+
T Consensus 157 ~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~ 197 (496)
T PRK03893 157 AVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEA 197 (496)
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCc
Confidence 999999999999999999888764433333 33333344554
No 23
>TIGR00895 2A0115 benzoate transport.
Probab=99.85 E-value=2.6e-20 Score=147.81 Aligned_cols=182 Identities=16% Similarity=0.149 Sum_probs=153.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
.++........++...........+.|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 83 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWG-----------LDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR 83 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccC-----------CCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH
Confidence 3444455555555666666667777888887765 78888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 107 SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
.+..+..+..++.+.....++.+...+.+++.|++.+...+...+++.|.+|+++|+++.++......+|..++|.+.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 163 (398)
T TIGR00895 84 VLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGW 163 (398)
T ss_pred HHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHH
Confidence 99999998888888888888888888888999998888889999999999999999999999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 187 LVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 187 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.+..||+..+.+.+++..+..+....+.||+.
T Consensus 164 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 164 LIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred HhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 999999998888876666666655566667653
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.85 E-value=8.2e-20 Score=146.59 Aligned_cols=166 Identities=15% Similarity=0.142 Sum_probs=145.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
.+++......+.++...+..+......|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r 83 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLG-----------LTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK 83 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 34455666666677777777777777887776665 8888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+++..+.....++.+...+.++.+.+.+.+++.|++.+...+....++.|.+|+++|+++.++......+|..+++.+.+
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~ 163 (426)
T PRK12307 84 PLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMP 163 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHH
Confidence 99999999999999988888899999999999999999889999999999999999999999999999999999999999
Q ss_pred HHhhccchhHHHHHHHH
Q 026854 186 GLVTSCHLRLAVILFEV 202 (232)
Q Consensus 186 ~l~~~~g~~~~~~~~~~ 202 (232)
.+.+..+|+..+++...
T Consensus 164 ~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 164 SFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHcccCCHHHHHHHHHH
Confidence 99888899988876443
No 25
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.85 E-value=3.6e-20 Score=150.98 Aligned_cols=179 Identities=10% Similarity=0.064 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
+..+.+..+.............|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 72 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLG-----------SSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLI 72 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHH
Confidence 344555566666666677778898887776 788888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 111 MFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
+..+..++.+.....++.+.+.+.+++.|++.+...+...+++.|.+|+++|+++.++......+|..++|.+++++.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 73 STFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 99999999998888889999999999999999988999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 191 CHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 191 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.+|++.+++...+.++..+...+..||+++
T Consensus 153 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 153 YHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred cCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999988877777666666666666543
No 26
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.85 E-value=6.6e-20 Score=143.99 Aligned_cols=168 Identities=12% Similarity=-0.068 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 026854 41 NAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLL 120 (232)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 120 (232)
+......+....|.+.++++ .+..+.++..+...++..++.++.|+++||+|||+++..+......+..
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~-----------~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 71 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDID-----------VSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG 71 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhC-----------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 34555667777888887776 8889999999999999999999999999999999887655554444433
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHH
Q 026854 121 PLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILF 200 (232)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~ 200 (232)
.....++...+.+.+++.|++.+. ........+|++|+++|++++++.+....+|..+++.+.+++.+..||+..|.+.
T Consensus 72 ~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~ 150 (368)
T TIGR00903 72 RLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPI 150 (368)
T ss_pred HHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 223336788899999999998875 4555566699999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcccccccC
Q 026854 201 EVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 201 ~~~~~~~~~~~~~~~~e~~~ 220 (232)
+++.++..++.++..||+++
T Consensus 151 ~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 151 AAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHHHHcCCCCC
Confidence 88887777777777787653
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.85 E-value=3.9e-20 Score=146.47 Aligned_cols=169 Identities=13% Similarity=0.113 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 026854 41 NAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLL 120 (232)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 120 (232)
.....+......|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 74 (399)
T TIGR00893 6 NYLDRANLSFAAPMLQEDLG-----------LSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTG 74 (399)
T ss_pred HHHHHHhhhHhHHHHHHhhC-----------CChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHH
Confidence 34444556666777776665 8889999999999999999999999999999999999999999998888
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHH
Q 026854 121 PLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILF 200 (232)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~ 200 (232)
...+.++.+.+.+.+++.|++.+...+....++.|.+|+++|+++.++......+|..++|.+.+.+.+..+|+..+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 154 (399)
T TIGR00893 75 LQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIE 154 (399)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhcccccccC
Q 026854 201 EVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 201 ~~~~~~~~~~~~~~~~e~~~ 220 (232)
++...+..+..++..||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 155 GVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHhhheecCCCC
Confidence 88777776666666666543
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.85 E-value=2.7e-19 Score=145.32 Aligned_cols=182 Identities=14% Similarity=0.190 Sum_probs=144.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc
Q 026854 24 SRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIG 103 (232)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 103 (232)
++++++.+...+...+......+....+.|.+.++.+ .+..+.++..+...++..++.++.|+++||+|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-----------ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G 99 (476)
T PLN00028 31 ARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLN-----------LTKSDIGNAGIASVSGSIFSRLAMGPVCDLYG 99 (476)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3455666677777777777777777778888887776 88888888888888999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHH
Q 026854 104 RKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 104 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 183 (232)
||+++..+.++.+++.+...+.++.+.+.+.+++.|++.+... ....+++|++|+++|+++.|+.+...++|+.+++.+
T Consensus 100 ~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 100 PRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888888888888888888888888776543 345678999999999999999998888888887776
Q ss_pred HHHHhh---------ccchhHHHHHHHHHHHHHHHHHhccccc
Q 026854 184 AVGLVT---------SCHLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 184 ~~~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
.+.+.+ ..||+..|++.+++.++..+..+++.++
T Consensus 179 ~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 179 MPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 665532 2489999998888877766666555433
No 29
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=1.6e-19 Score=143.49 Aligned_cols=174 Identities=12% Similarity=0.070 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHH
Q 026854 36 VLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLA 115 (232)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 115 (232)
...+....+........|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.++.+..+.
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 78 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLN-----------ASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALF 78 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHH
Confidence 3344444455555567888877665 88888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhH
Q 026854 116 CIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRL 195 (232)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~ 195 (232)
.++.......++.+...+.+++.|++.+...+..+.++.|.+|+++|+++.++.+....++..++|.+.+.+.+..+|+.
T Consensus 79 ~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~ 158 (392)
T PRK10473 79 IIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQS 158 (392)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH
Confidence 88888888888888888888889988888888899999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccC
Q 026854 196 AVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.+++.+++..+..+......||+++
T Consensus 159 ~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 159 LFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 8988888877777666666677643
No 30
>PRK03699 putative transporter; Provisional
Probab=99.84 E-value=4.6e-19 Score=140.91 Aligned_cols=176 Identities=15% Similarity=0.198 Sum_probs=148.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
+++|.++...+.++......+......|.+.++.+ .+..+.++..+...++..++.++.|++.||+|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~-----------~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r 72 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFN-----------LPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK 72 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 44566666666677666667777788888887766 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+++..+..+..++.+...+.++.+.+.+.+++.|++.+...+....++.|.+|+++|+.+.+..+....+++.++|.+.+
T Consensus 73 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 152 (394)
T PRK03699 73 RQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAA 152 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888889999999888888888899999999999999999988888899999999988
Q ss_pred HHhh-ccchhHHHHHHHHHHHHHHHHHh
Q 026854 186 GLVT-SCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 186 ~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
.+.+ ..+|+..+.+.++..++..+..+
T Consensus 153 ~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 153 YLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 8765 46899998887777665554433
No 31
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.84 E-value=3.2e-19 Score=141.78 Aligned_cols=184 Identities=11% Similarity=0.052 Sum_probs=150.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
+.+|..+.......+..+.........|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr 73 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLN-----------VREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR 73 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh
Confidence 34454555555555555555555556777776665 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+.+..+.....++.+.....++.+.+.+.+++.|++.+...+....+..|.+|.++|+.+.++.+....++..++|.+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 74 PVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888778888888888999998887777777888899999999999999998888999999999999
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 186 GLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 186 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.+.+..||+..+++.++...+..+...++.||+++
T Consensus 154 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 154 LLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99998899999988877766655555555677643
No 32
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.84 E-value=2.2e-19 Score=140.96 Aligned_cols=166 Identities=11% Similarity=0.059 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLAC 116 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 116 (232)
..+.............|.+..+.+ .+..+.++..+...++..++.++.|+++||+|||++++.+..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~ 75 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVLAGT-----------GSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRA 75 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-----------ccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHH
Confidence 344444444445555666765554 788899999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhh-----hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 117 IFLLPLVFHQ-----SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 117 ~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
++........ +.+.+.+.+++.|++.+...+...++++|++|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 76 VLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8777777665 88888889999999999889999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhc
Q 026854 192 HLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 192 g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
||+..+++.++..++..+..+.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 156 GIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 9998888877666655544443
No 33
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.83 E-value=4.6e-19 Score=141.43 Aligned_cols=170 Identities=16% Similarity=0.061 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q 026854 40 ANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFL 119 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~ 119 (232)
........+....|.+.++++ .+..+.++..+...++..++.++.|+++||+|||+.+..+.....++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~ 92 (406)
T PRK15402 24 ATYIANDMIQPGMLAVVEDFN-----------AGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTC 92 (406)
T ss_pred HHHhhhhhHhcchHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 333344444444566665555 788888999999999999999999999999999999999999988888
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHH
Q 026854 120 LPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVIL 199 (232)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~ 199 (232)
+.....++.+.+.+.+++.|++.+...+.....+.|.+|+++|+++.++......++..++|.+.+.+.+..+|+..+++
T Consensus 93 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~ 172 (406)
T PRK15402 93 LAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVL 172 (406)
T ss_pred HHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 88888888888888899999888777788889999999999999999999888889999999999999998899999988
Q ss_pred HHHHHHHHHHHHhcccccccC
Q 026854 200 FEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 200 ~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.+++.++..+..+...||+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 173 FAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHhCCCCCc
Confidence 888877776666666677653
No 34
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.83 E-value=4.9e-19 Score=141.46 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=133.3
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+..+..+..+.+.++..++.++.|+++||+|||++++.+..+..++.+.....++.+.+.+.+++.|++.+...+..+.
T Consensus 48 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~ 127 (413)
T PRK15403 48 ADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYV 127 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888899999999999999999999999999999999999999998888888889989999999999988766677788
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
++.|.+|+++|++++++.+....++..++|.+++.+.+..||+..|++.++..++..+..++..||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 128 TVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 899999999999999999999999999999999999998899999999888877776665666688754
No 35
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=4.2e-21 Score=148.37 Aligned_cols=188 Identities=14% Similarity=0.046 Sum_probs=165.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
..+...++++....+...-|.+..-.+...+.++ .+++..++......+...+++++.|+++||++||+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fn-----------i~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~ 99 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFN-----------ISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR 99 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcC-----------CCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce
Confidence 3455666667777777777777665555554443 88899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 107 SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
++.+|..+..++.+...+...+|.+.+++.+.|++...+.++.+++++|.+|.++|++++++.+....+|..+|-..+..
T Consensus 100 v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 100 VIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred Hhhccc-hhHHHHHHHHHHHHHHHHHhcccccccCCCchh
Q 026854 187 LVTSCH-LRLAVILFEVVFVLAIASSLLFPFETKGRELKD 225 (232)
Q Consensus 187 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 225 (232)
+.+..+ |++.+...+++.++.+++.+++.+|++++..++
T Consensus 180 va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 180 VASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred eccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 888777 899999999999999998888888877644433
No 36
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.83 E-value=4.8e-19 Score=143.59 Aligned_cols=176 Identities=14% Similarity=0.079 Sum_probs=148.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh-hchH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK-IGRK 105 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr 105 (232)
+.+.++.+.+..++..+.+|....++|.|.++.+ +.|.+..+.+.......++..++.+++|+++|| +|||
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~--------~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~ 79 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQA--------GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK 79 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH
Confidence 3455667777788888999999999999986530 023888999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccch---hhhhhHHHHHhhhhhhchhHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSA---RTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~~~ 182 (232)
+++.++..+.+++.+.+.+.++.+.+.+.+.+.+++.+...+...++++|.+|+++ |+++.++.+...++|+.++|.
T Consensus 80 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 80 KTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 99999999999998888887777677777788888888888999999999998764 889999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHH
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
+.+++.++.||+..|.+.++..+++.+.
T Consensus 160 l~g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 160 LAGVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 9999999889999888877655554433
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.83 E-value=1.7e-19 Score=142.09 Aligned_cols=173 Identities=13% Similarity=0.062 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHH
Q 026854 33 LLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMF 112 (232)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 112 (232)
...+.........+....+.|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~ 75 (377)
T TIGR00890 7 VGTVIMCFTSGYVYTWTLLAPPLGRYFG-----------VGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGG 75 (377)
T ss_pred HHHHHHHHHhhHHhhhhhHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhH
Confidence 3344444444446677778888887776 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 113 VLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
.+.+++.+...+.++.+.+.+.+.+.|++.+...+.......|++| ++|+++.++......+|..+++.+.+.+.+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (377)
T TIGR00890 76 ILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG 154 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc
Confidence 9999999888889999999899999998888777777777888887 569999999999999998887777777778889
Q ss_pred hhHHHHHHHHHHHHHHHHHhccccc
Q 026854 193 LRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
|+..+.+.++..++..+..+++.+|
T Consensus 155 ~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 155 VPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheec
Confidence 9999998888877776665555443
No 38
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.83 E-value=5.7e-19 Score=141.42 Aligned_cols=176 Identities=10% Similarity=-0.048 Sum_probs=144.5
Q ss_pred HHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh
Q 026854 46 YGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH 125 (232)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 125 (232)
.....+.|.+.++.. +.+....++......++.+++.++.+++.||.++++.+..+..+..+..+.....
T Consensus 240 ~~~~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 309 (417)
T PRK10489 240 SAVRVLYPALADEVW----------QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM 309 (417)
T ss_pred HhHHHhhHHHHHhcc----------CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc
Confidence 445567788886622 3777788888888999999999999999999888888888887777777766666
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHH
Q 026854 126 QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFV 205 (232)
Q Consensus 126 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~ 205 (232)
++.+...+..++.|++.+...+...++..|..|++.|+++.|+.+...++|..++|.+.|++.+..|....+...+++..
T Consensus 310 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~ 389 (417)
T PRK10489 310 PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLL 389 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 66666666677777777666777788999999999999999999999999999999999999999998888888888777
Q ss_pred HHHHHHhcccccccCCCchhhHHhhh
Q 026854 206 LAIASSLLFPFETKGRELKDAVDAIE 231 (232)
Q Consensus 206 ~~~~~~~~~~~e~~~~~~~~~~~~~~ 231 (232)
+..++.....||+++++.+|.++|..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (417)
T PRK10489 390 IIGVLLLLVLGELRRFRQTPPEVDAS 415 (417)
T ss_pred HHHHHHHHhcccccccccccccCCCC
Confidence 77777777778999888888777653
No 39
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=1.6e-18 Score=138.27 Aligned_cols=176 Identities=16% Similarity=0.126 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchh-----hHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNS-----LYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
....++..++..........++|.+.++.+ .+..+ .++..+...++..++.++.|+++||+|||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 84 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLG-----------VTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK 84 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhC-----------CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH
Confidence 444455566666666677778888887765 44333 36778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+.+..+.....++.+.....++.+.+.+.+++.|++. +..+....++.|.+|+++|+++.++.+....+|..++|.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 163 (408)
T PRK09874 85 IMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG 163 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888887777788888888888888765 445667778889999999999999999999999999999999
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 186 GLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 186 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
.+.+..+|+..+++.+++.++..+...++.||+
T Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 164 LLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999988999999888887777766666665654
No 40
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.82 E-value=2.2e-18 Score=140.40 Aligned_cols=175 Identities=17% Similarity=0.147 Sum_probs=130.6
Q ss_pred HHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 026854 45 YYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 124 (232)
++....+.|.+.++.+ .+.....+.....++..+++.++.++++||+|||+.++.+..+++++.+.+..
T Consensus 287 ~~~~~~~~p~i~~~~g-----------~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~ 355 (479)
T PRK10077 287 INVVLYYAPEIFKTLG-----------ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT 355 (479)
T ss_pred hhHHHHHHHHHHHHcC-----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHH
Confidence 3344566787776555 66666667777788889999999999999999999999999988887776654
Q ss_pred hh--h-H-HHHHHHHHHHHHHHh-hhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh------hccch
Q 026854 125 HQ--S-A-VVTTVLLFGVRMCAT-GTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV------TSCHL 193 (232)
Q Consensus 125 ~~--~-~-~~~~~~~~~~g~~~~-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~------~~~g~ 193 (232)
.. + . .......++.+.+.+ ...+..+.+++|.+|++.|+++.|+.+...++++.+++.+.+.+. +..++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~ 435 (479)
T PRK10077 356 AFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN 435 (479)
T ss_pred HHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC
Confidence 21 1 1 122222333333333 234678899999999999999999999999999999877776544 56778
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccccCCCchhhHHhh
Q 026854 194 RLAVILFEVVFVLAIASSLLFPFETKGRELKDAVDAI 230 (232)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 230 (232)
+..++++++..+++.+..+++.||+++++.+|.+++.
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 472 (479)
T PRK10077 436 GFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALW 472 (479)
T ss_pred ccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHH
Confidence 8888888888777777777788999998887766553
No 41
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.82 E-value=1.1e-19 Score=143.19 Aligned_cols=170 Identities=15% Similarity=0.088 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
++........+....|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+..+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 72 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIG-----------LSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAI 72 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhC-----------CCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHH
Confidence 44555566666777787776665 8889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH-HHHHHHhhccchhHH
Q 026854 118 FLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP-LVAVGLVTSCHLRLA 196 (232)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~-~i~~~l~~~~g~~~~ 196 (232)
+.++..+.++.+.+.+.+++.|++.+...+...+++.|++|+++|+++.++.+....+|..++| .+.+.+.+..+|+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (379)
T TIGR00881 73 VNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWV 152 (379)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhH
Confidence 9998888889888999999999999888999999999999999999999999999999999999 566777777899988
Q ss_pred HHHHHHHHHHHHHHHhcccccc
Q 026854 197 VILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+++.+++.++..+..+.+.||+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHHHHHHHHHheeeCCC
Confidence 8888877776666666665654
No 42
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=1.3e-18 Score=136.96 Aligned_cols=176 Identities=19% Similarity=0.217 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSK-LSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
.+..++..+......+....+.|. +.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 71 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLG-----------LSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTT 71 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhC-----------CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 345666666777777788888885 555555 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 110 LMFVLACIFLLPLVFHQ-SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
++..+..++.+...+.+ +.+.+.+.+++.|++.+ ..+....+++|++|+++|+++.++.....++|..+++.+.+.+.
T Consensus 72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999988888888 88888888998888754 44567788999999999999999999888888888888877665
Q ss_pred hc----------cchhHHH-HHHHHHHHHHHHHHhcccccc
Q 026854 189 TS----------CHLRLAV-ILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 189 ~~----------~g~~~~~-~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+. .+|++.+ ...+++..+..++.+...+|+
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 42 3788777 333444444444444444443
No 43
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.82 E-value=1.1e-18 Score=141.63 Aligned_cols=171 Identities=10% Similarity=0.074 Sum_probs=142.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh-hch
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK-IGR 104 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~gr 104 (232)
+++|.++.+++..+...+.+|....+++.|.++.. +.+..+..+....+.....+..+++|+++|| +||
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l----------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~ 80 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQL----------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGT 80 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccch
Confidence 46677888888888899999999988888874422 3788888888888887888888899999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHhhhhhhhhhccccccccc--hhhhhhHHHHHhhhhhhchhH
Q 026854 105 KLSMVLMFVLACIFLLPLVFHQSAV-VTTVLLFGVRMCATGTITVATIYAPEIYPTS--ARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~ 181 (232)
|++++++.++..++.+.+.+..+.. .+.+.+.+.+++.+...+...+++.|.+|++ +|+.+.++.+...++|..++|
T Consensus 81 r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~ 160 (489)
T PRK10207 81 KRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISL 160 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHH
Confidence 9999999999999998888765433 3446677788888888899999999999887 457889999999999999999
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHH
Q 026854 182 LVAVGLVTSCHLRLAVILFEVVFVL 206 (232)
Q Consensus 182 ~i~~~l~~~~g~~~~~~~~~~~~~~ 206 (232)
.++|++.++.||+..|++.++...+
T Consensus 161 ~l~g~l~~~~gw~~~F~i~~i~~~~ 185 (489)
T PRK10207 161 SLAPVIADKFGYSVTYNLCGAGLII 185 (489)
T ss_pred HHHHHHHHhhChHHHHHHHHHHHHH
Confidence 9999999999999988886543333
No 44
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.82 E-value=1.4e-18 Score=139.77 Aligned_cols=174 Identities=18% Similarity=0.161 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh-chH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI-GRK 105 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr 105 (232)
+++.++.++.......+.+|++..++|.|.++.. +.+..+.+...........++.+++|+++||+ |||
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~l----------gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr 76 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQL----------KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR 76 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence 5567777788888888999999999999985432 38888999898888899999999999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhhhhhhhhhccccccccc--hhhhhhHHHHHhhhhhhchhHH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQ-SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTS--ARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
++++++.++..++.+.+.... +.....+...+..++.+...+...++++|.+|++ .|.++.++.+...++|+.++|.
T Consensus 77 r~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 77 MAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 999999999888877665432 2222333333444555566677788999999986 6999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHH
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
+.+++.+..||+..|.+.++..+++.+.
T Consensus 157 l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 157 ACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 9999999999999988866555444443
No 45
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.82 E-value=4e-19 Score=143.09 Aligned_cols=179 Identities=13% Similarity=0.074 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+.++...+.+..............|.+.+ .+ .+..+.++..+...++..++.++.|+++||+|||+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g-----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~ 94 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QG-----------FSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL 94 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cC-----------CCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh
Confidence 33333444444444444445556675553 34 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 109 VLMFVLACIFLLPLVFH----QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
..+..+.+++.+..... .+...+.+.+++.|++.+...+.....+.|++|+++|+++.++.+....+++.++|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 99888888877766543 34555667778888888877788888899999999999999999999999999998887
Q ss_pred HHHhh-ccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 185 VGLVT-SCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 185 ~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+...+ ..+|+..+++.+++.++..+..+++.||++
T Consensus 175 ~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 175 LLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 76544 468999999888887776666666666643
No 46
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=7.1e-19 Score=139.00 Aligned_cols=162 Identities=12% Similarity=0.111 Sum_probs=142.0
Q ss_pred HHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh
Q 026854 47 GAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ 126 (232)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 126 (232)
......|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.......+
T Consensus 9 ~~~p~~~~~~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 77 (377)
T PRK11102 9 MYLPALPVIAADFG-----------VSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ 77 (377)
T ss_pred HHhccHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 33455677776655 8889999999999999999999999999999999999999999999988888888
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHH
Q 026854 127 SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 206 (232)
Q Consensus 127 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~ 206 (232)
+.+...+.+++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|+..+++.+.+..+
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAIL 157 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 88888888999999988888889999999999999999999999999999999999999999988999998888887777
Q ss_pred HHHHHhccccccc
Q 026854 207 AIASSLLFPFETK 219 (232)
Q Consensus 207 ~~~~~~~~~~e~~ 219 (232)
..+...+..||++
T Consensus 158 ~~~~~~~~~~~~~ 170 (377)
T PRK11102 158 AAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHhCCccC
Confidence 7666666667653
No 47
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.82 E-value=2.2e-18 Score=137.48 Aligned_cols=175 Identities=24% Similarity=0.318 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+.........+......+....|.|.+.++.+ .+..+.+.......++.+++.++.|+++||+|||+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 288 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVGQG-----------LSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV 288 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 33444444455555566677778898887655 7778888888899999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 109 VLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
..+.....++.......++.+...+..++.+++.++..+..+++..|.+|+++|+++.|+.+....+|+.++|.+.|++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 289 LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 88777666666655555566666666677777777778888899999999999999999999999999999999999999
Q ss_pred hccchhH-HHHHHHHHHHHHHHHHhcc
Q 026854 189 TSCHLRL-AVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 189 ~~~g~~~-~~~~~~~~~~~~~~~~~~~ 214 (232)
++.+.+. .+.....+.+++.+..+..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 369 ALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8765443 3444444444444444433
No 48
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.82 E-value=1.8e-19 Score=146.18 Aligned_cols=173 Identities=13% Similarity=0.009 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH
Q 026854 34 LWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV 113 (232)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 113 (232)
..+.+.........+....|.+.++++ .+..+.++..+...++..++.++.|+++||+|||+++..+.+
T Consensus 34 ~~~~~~~~y~~r~~~~~~~~~i~~~~~-----------~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 34 VFIGYLTMYLIRKNFKAAQNDMISTYG-----------LSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHhcChhhhhHHHHHhcC-----------CCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 333344444444555666788887776 888999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 114 LACIFLLPLVF-----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 114 ~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
+.++..+.... .++.+.+.+.+++.|++.+...+....+++|++|+++|++++|+......+|..+++.+..++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 77776665554 4778888899999999998888999999999999999999999999999999999999887776
Q ss_pred hcc---chhHHHHHHHHHHHHHHHHHhccccc
Q 026854 189 TSC---HLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 189 ~~~---g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
+.. +|+..+.+.+++.++..+..+++.++
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 653 47766776666666555555544433
No 49
>TIGR00898 2A0119 cation transport protein.
Probab=99.82 E-value=2e-18 Score=141.46 Aligned_cols=187 Identities=36% Similarity=0.620 Sum_probs=136.1
Q ss_pred chhhhcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHH
Q 026854 18 SFFTLFSR-KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSA 96 (232)
Q Consensus 18 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 96 (232)
+.++++++ +.++.++...+.++.....+|....+.+.+. .+ ........++..+++.++.+
T Consensus 315 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~~~i~~~~~~~ 376 (505)
T TIGR00898 315 SFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG---------------GN---IYLDLFISGLVELPAKLITL 376 (505)
T ss_pred cHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC---------------CC---hHHHHHHHHHHHHHHHHHHH
Confidence 45666653 3344444455555555566665555444322 22 23445566788889999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhh
Q 026854 97 IIVDKIGRKLSMVLMFVLACIFLLPLVFHQSA--VVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 174 (232)
Q Consensus 97 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 174 (232)
++.||+|||+.+.++..+.+++.+.+.+.++. +......++.+++.+..++..+.+.+|.+|++.|++++|+.+....
T Consensus 377 ~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 456 (505)
T TIGR00898 377 LLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMAR 456 (505)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHH
Confidence 99999999999999998888887777664432 4444455566666667778889999999999999999999999999
Q ss_pred hhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCchh
Q 026854 175 VGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGRELKD 225 (232)
Q Consensus 175 ~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 225 (232)
+|++++|.+.+ + +..+...++.++++..+++.+..+ ++|||++++++|
T Consensus 457 ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l~~ 504 (505)
T TIGR00898 457 VGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETKGVPLPE 504 (505)
T ss_pred HHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCCCCCCC
Confidence 99999999998 4 444666777787777777766654 458999887764
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.82 E-value=3e-18 Score=136.39 Aligned_cols=174 Identities=14% Similarity=0.056 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHH
Q 026854 33 LLWVLFFANAFSYYGAVLLTSKLS-SGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLM 111 (232)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~ 111 (232)
.+....+......+....+.|.+. ++.+ .+..+.++..+...+...+..++.|+++||+|||+++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~ 82 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLG-----------WAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTG 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHH
Confidence 344555555566566666666654 3444 8889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 112 FVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
..+..+..+.....++.+.+.+.+++.|++.+...+...+++.|.+|+++|+++.|+.+...++|..++|.+++++. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~ 161 (400)
T PRK11646 83 MLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY 161 (400)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 99999999888888888888888888898887778888899999999999999999999999999999999999998 56
Q ss_pred chhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 192 HLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
||+..+++.+...++..+......||.
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999888887777666655544455654
No 51
>PRK11043 putative transporter; Provisional
Probab=99.81 E-value=3.7e-18 Score=136.01 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=127.7
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+..+.++..+...++..++.+++|+++||+|||+.+..+..+..++.+...+.++.+.+.+.+++.|++.+...+...+
T Consensus 38 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 117 (401)
T PRK11043 38 TSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQA 117 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 88899999999999999999999999999999999999999888888888888888888888888888887777777788
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccc
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
++.|.+|+++|+...+..+....++..++|.+.+++.+..||+..+++.+++.++..+..+...++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 118 LVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999999998888899999999999999999999998888877777666655544333
No 52
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.81 E-value=3.6e-18 Score=138.57 Aligned_cols=180 Identities=19% Similarity=0.264 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH
Q 026854 34 LWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV 113 (232)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 113 (232)
..+..+...........+.|.+.++.+ .+..+.+.......++.+++.++.|+++||+|||+.+..+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 357 (481)
T TIGR00879 289 VVLQWFQQFTGINAIMYYSPTIFENAG-----------VSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAA 357 (481)
T ss_pred HHHHHHHHHhCCeehHHHHHHHHHHcC-----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 333333333344455667787776655 666777888888889999999999999999999999998888
Q ss_pred HHHHHHHHHHh-----hh------hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHH
Q 026854 114 LACIFLLPLVF-----HQ------SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 114 ~~~~~~~~~~~-----~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
+..++.+.+.. .+ +........+..+....+..+....+..|.+|++.|+++.++.+...++|++++|.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~ 437 (481)
T TIGR00879 358 GMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGF 437 (481)
T ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666552 11 22222222333333333445777788899999999999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCch
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGRELK 224 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 224 (232)
+.+.+.++.++...+++.+++++++.+..+++.||+++++.+
T Consensus 438 ~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 438 LFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 999999988999889998888888888888888888876654
No 53
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.81 E-value=5.7e-18 Score=136.21 Aligned_cols=180 Identities=17% Similarity=0.049 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchh---hHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNS---LYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
+....+.++...+....+....|.+.++.+. .+.+..+ .........++..++++++|+++||+|||+.
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFP--------SGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3444455666666666666777777765531 0122232 3334455566677999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhH--------HHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch
Q 026854 108 MVLMFVLACIFLLPLVFHQSA--------VVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
+..+..+..++.+...+.++. ..+.+.+++.|++.++..+...++++|++|+++|++..++.+.....|..+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 999999999999888775543 357788999999999999999999999999999999999887777777777
Q ss_pred hHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 180 CPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 180 ~~~i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
++.+...+. +..||+..|++.++..++.. ......||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~ 222 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETS 222 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 776655443 25699999987666555443 3344456654
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.81 E-value=2.6e-18 Score=136.97 Aligned_cols=179 Identities=8% Similarity=-0.068 Sum_probs=134.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
.+|.+....+..+......+....+.|.+.++.+ .+..+.++..+...++..++.++.|++.||+|||+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g-----------~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~ 79 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALG-----------LSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLK 79 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhC-----------CCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 3455555566666666655555566777776665 88899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhh-chhH
Q 026854 107 SMVLMFVLACIFLLPLV---F-HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGG-MVCP 181 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~ 181 (232)
++..+..+.+++.+... . ..+.+.+.+.+++.|++.+...+.....+.|.+|+++|++++|+.+...++|. .++|
T Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~ 159 (402)
T TIGR00897 80 TMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGS 159 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888765442 2 24566667778888877766666677788899999999999999999999886 5789
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 026854 182 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 182 ~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 216 (232)
.+.+++.+..|+...++.......+..++..++.+
T Consensus 160 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 160 YYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999888888665555444333333333333333
No 55
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.80 E-value=7.5e-18 Score=137.50 Aligned_cols=182 Identities=13% Similarity=0.022 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchh--hHH--HHHHHHhhhhhHHHHHHHHHhhhc
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNS--LYV--DVFITSFAELPGLILSAIIVDKIG 103 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~g~l~dr~g 103 (232)
++......+.++...+.+..+....|...+++.. +.++.. .+. ..+...++..+++++.|+++||+|
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G 85 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFP---------GADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYG 85 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445555566666666666666677766655430 011111 111 235667889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhh
Q 026854 104 RKLSMVLMFVLACIFLLPLVFHQSAVV--------TTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRV 175 (232)
Q Consensus 104 rr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 175 (232)
||+++.++.++++++.++..+.++... +.+.+++.|++.++..+...++++|++|+++|+...++......+
T Consensus 86 rr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 165 (490)
T PRK10642 86 RQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 165 (490)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 999999999999999999998877653 678899999999999999999999999999999999998877777
Q ss_pred hhchhHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 176 GGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 176 g~~~~~~i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
|..+++.+...+. +..||+..|++.+...+++ ++.....||++
T Consensus 166 G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp 216 (490)
T PRK10642 166 GFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETP 216 (490)
T ss_pred HHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCCh
Confidence 7777776654443 2579999998866544443 33445567764
No 56
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.80 E-value=3.9e-18 Score=138.42 Aligned_cols=176 Identities=13% Similarity=0.061 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+.++...+..++....++....|.|.|.++.. |.+..+.++......++.+++.+++|+++||+|||+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~ 327 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQEL----------GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRAL 327 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH
Confidence 45666666777777777788899999885432 37888888888889999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhh-hhchhHHHHH
Q 026854 109 VLMFVLACIFLLPLV--FHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRV-GGMVCPLVAV 185 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~i~~ 185 (232)
........+...... ..++.....+..++.|++..+..........|.+|++.||++.|+.+..+++ |+.++|.+.|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 328 VACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 655444333322222 2334444445555566544333333345667999999999999999999996 7799999999
Q ss_pred HHhh------------ccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 186 GLVT------------SCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 186 ~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
++.| ..||...|.+..++.+++.+..++.
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 5688888888877777765555433
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.80 E-value=6.1e-18 Score=137.75 Aligned_cols=148 Identities=17% Similarity=0.085 Sum_probs=122.4
Q ss_pred CCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHH
Q 026854 71 KSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH------------QSAVVTTVLLFGV 138 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 138 (232)
+.+..+.++..+...++..+++++.|+++||+|||++++++..+..++.+...+. .....+++.+++.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 4777888999999999999999999999999999999999999888877665542 2234567889999
Q ss_pred HHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh--------hccchhHHHHHHHHHHHHHHHH
Q 026854 139 RMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 139 g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
|++.+...+...++++|++|+++|++++++......+|..+++.+.+.+. +..||+..+++.++..++..+.
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML 210 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988899888877765543 3468999988877666665544
Q ss_pred Hhccccccc
Q 026854 211 SLLFPFETK 219 (232)
Q Consensus 211 ~~~~~~e~~ 219 (232)
.+++||++
T Consensus 211 -~~~l~~s~ 218 (479)
T PRK10077 211 -LYFVPETP 218 (479)
T ss_pred -HHcCCCCc
Confidence 45568865
No 58
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.80 E-value=7.3e-18 Score=137.99 Aligned_cols=187 Identities=18% Similarity=0.132 Sum_probs=137.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
+++....+.+..+...+.........|.+..+..+ .....+..+.++..+...++.+++.++.|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~ 87 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYH------GKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKR 87 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 33444444555555555544455555555432110 001244556678888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchh
Q 026854 107 SMVLMFVLACIFLLPLVFHQS------AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
.+.++.++..++.++.....+ .+.+.+.+++.|++.+...+....+++|.+|++.|+++.++.+....+|..++
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 999999888888877766543 56788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-----------------------ccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 181 PLVAVGLVT-----------------------SCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 181 ~~i~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
+.+...+.. ..+|+..+.+.++..++. .+..+++||+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr 229 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHH
Confidence 888776532 126887776555444443 344456699743
No 59
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.80 E-value=9.3e-18 Score=133.65 Aligned_cols=170 Identities=9% Similarity=-0.062 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLS-SGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
|++....+..+............+|.+. ++.+ .+..+.++..+...++..+++++.|+++||+|||++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g-----------~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~ 83 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLG-----------FSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKA 83 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------ccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcch
Confidence 4555566666666666666666777765 3444 888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh---h-----hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch
Q 026854 108 MVLMFVLACIFLLPLVF---H-----QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
+..+.++.+++...... . .+.+.+++.+++.|++.+...+....+..|..|+++|+++.++......+|..+
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 84 VVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 99999887776554433 1 244567788899999988888888888999999999999999988888899999
Q ss_pred hHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 026854 180 CPLVAVGLVTSCHLRLAVILFEVVFVLAIA 209 (232)
Q Consensus 180 ~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 209 (232)
+|.+++.+.+..||+..+.+..+...+..+
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 193 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLL 193 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 999999999999998777765555444433
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.79 E-value=6.7e-18 Score=134.13 Aligned_cols=171 Identities=12% Similarity=0.024 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHH
Q 026854 33 LLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMF 112 (232)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 112 (232)
..+...+...+.........+...++.+ .+..+.++..+...+...+..++.|+++||+|||++++++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~ 75 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELH-----------YPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIAN 75 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHH
Confidence 3444455444433333333444555554 67778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 113 VLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
.+..++.+.+....+. .+.+++.|++.+...|...++++|++|+++|+++.|+......++..++|.++|++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~- 151 (393)
T PRK11195 76 GIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH- 151 (393)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9888877766555443 566788999999999999999999999999999999999999999999999999998863
Q ss_pred hhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 193 LRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
++..+.+.+...++.. +.....||.+
T Consensus 152 ~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 152 AEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 5555555444443333 3344556653
No 61
>PRK12382 putative transporter; Provisional
Probab=99.79 E-value=1.7e-17 Score=131.86 Aligned_cols=165 Identities=8% Similarity=-0.070 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLS-SGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
+.++...+..+............+|.+. ++.+ .+..+.++..+...++..+++++.|+++||+|||+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg-----------~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~ 83 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLG-----------FGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRS 83 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcC-----------CcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHH
Confidence 3344444555555555555555666654 4454 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh--------hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch
Q 026854 108 MVLMFVLACIFLLPLVF--------HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
++.+.....++.+.... .++.+.+.+.+++.|++.+...+...+++.|.+|+++|++++++.......+..+
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~ 163 (392)
T PRK12382 84 ALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA 163 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH
Confidence 99888776655432211 2466778888999999888878888888999999999999999999888999999
Q ss_pred hHHHHHHHhhccchhHHHHHHHHHH
Q 026854 180 CPLVAVGLVTSCHLRLAVILFEVVF 204 (232)
Q Consensus 180 ~~~i~~~l~~~~g~~~~~~~~~~~~ 204 (232)
+|.+++.+.+..||+..+.+.....
T Consensus 164 g~~~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 164 GAPLGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred HHHHHHHHHhccChHHHHHHHHHHH
Confidence 9999999999889886655544433
No 62
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.79 E-value=1.5e-18 Score=140.85 Aligned_cols=147 Identities=18% Similarity=0.139 Sum_probs=123.0
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH---QSAVVTTVLLFGVRMCATGTITV 148 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~ 148 (232)
.+..+.++..+...++..++.++.|+++||+|||++++.+..+..++....... .+.+.+++.+++.|++.+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 557888999999999999999999999999999999999999888887777553 33447888899999999999999
Q ss_pred hhhccccccccchhhhhhHHHHHhhhhhhchhHHHH---HHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 149 ATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA---VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 149 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~---~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
...+++|++|+++|+++.++.+....+|..+++.+. +...+..+|+..+++.+...++.. ...++.||++
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~ 220 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESP 220 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCh
Confidence 999999999999999999999999999999999998 665567799988888555544444 3444557753
No 63
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.79 E-value=2.5e-18 Score=139.58 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=130.3
Q ss_pred cCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhhh
Q 026854 69 ADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF--HQSAVVTTVLLFGVRMCATGTI 146 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~ 146 (232)
..+.+..+.+...+...++..++.++.|+++||+|||+.+..+.++..+..+.... ..+.+.+++.+++.|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 35688888999999999999999999999999999999999999888887766544 3446678888999999999999
Q ss_pred hhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 147 TVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 147 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+....+++|++|+++|+++.++.+....+|..++|.+.+.+.+. .||+..|.+.++..++..+..+...+|+
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999988 4999999988887777666666555554
No 64
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.5e-18 Score=131.90 Aligned_cols=190 Identities=20% Similarity=0.186 Sum_probs=152.9
Q ss_pred cchhhhcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHH
Q 026854 17 SSFFTLFSR--KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLIL 94 (232)
Q Consensus 17 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (232)
.+.++.+.+ ...|.+|.+.+.++...+..|++..|.|.|+.+.. |++..++.+..+.+-++.++|+++
T Consensus 238 ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k----------~~s~~~a~~a~~lfE~agl~G~Ll 307 (448)
T COG2271 238 LTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVK----------GFSLVKANWAISLFEVAGLPGTLL 307 (448)
T ss_pred ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc----------CCCHHHHHHHHHHHHHHhhHHHHH
Confidence 344554432 23467888888999999999999999999997765 699999999999999999999999
Q ss_pred HHHHHhhh--chHHHHHHHH-HHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHH
Q 026854 95 SAIIVDKI--GRKLSMVLMF-VLACIFLLPLVFHQ--SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVA 169 (232)
Q Consensus 95 ~g~l~dr~--grr~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 169 (232)
+||++||+ |||..+.+.+ +...++.......+ |.....++.+..|+...+..-+.-....|..|++.-|++.|+.
T Consensus 308 ~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~ 387 (448)
T COG2271 308 AGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFV 387 (448)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchh
Confidence 99999996 6776554444 44444444444443 4477778888889888888888888899999999999999999
Q ss_pred HHhhhh-hhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 026854 170 SAVGRV-GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 170 ~~~~~~-g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 216 (232)
..++.+ |+..+....+++.|.+||...|.+..+.++++.+.......
T Consensus 388 Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 388 GLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 999998 89999999999999999999999888888777666555543
No 65
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.79 E-value=2.9e-17 Score=130.10 Aligned_cols=154 Identities=13% Similarity=-0.022 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
+.+.++.+++..+...........+.|.+.++.+ .+..+.++..+...++..+++++.|+++||+|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-----------~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEH-----------LPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4456667777777777777778888999998776 88899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 107 SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
.+..+..+..++.....+.++.+.+.+.+++.|++.+...+.......+..|+++|++++++.+...++|..++|.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998888888888888889999999999888888777777888899999999999999999999999999998
Q ss_pred Hhhcc
Q 026854 187 LVTSC 191 (232)
Q Consensus 187 l~~~~ 191 (232)
+.+..
T Consensus 153 l~~~~ 157 (381)
T PRK03633 153 VSTEL 157 (381)
T ss_pred ccccc
Confidence 87653
No 66
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.79 E-value=4.1e-17 Score=130.05 Aligned_cols=179 Identities=13% Similarity=0.087 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
+|.++...+..+......+......+.+.+ +++ .+.++.++..++..++..+..++.|++.||+|.|+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~-----------ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~ 101 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFN-----------FTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRR 101 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 455666666666666666666666666654 444 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH
Q 026854 107 SMVLMFVLACIFLLPLVFH-----QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
++.++.++..+..+...+. ++++.+++.+++.|++ +..++.....+++++|+++||++.|+....+++|..+++
T Consensus 102 v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 102 WTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 9999999988888887765 6888899999999987 667888999999999999999999999877788887776
Q ss_pred HHHHHHh-----h-------------ccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 182 LVAVGLV-----T-------------SCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 182 ~i~~~l~-----~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
.+.+.+. + ..+++...+++..+.++..+..+++.++.
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 6665543 2 22366666777777777776666665554
No 67
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.78 E-value=1.1e-17 Score=133.77 Aligned_cols=149 Identities=9% Similarity=0.111 Sum_probs=121.8
Q ss_pred chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHhhhhhhh
Q 026854 74 DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ----SAVVTTVLLFGVRMCATGTITVA 149 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~ 149 (232)
.+..+...++..+..+++.++.|+++||+|||+++..+.++..+......... +.+...+..++.+++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35668888888899999999999999999999999999998888766555522 22345556777888777777888
Q ss_pred hhccccccccchhhhhhHHHH-HhhhhhhchhHHHHHHHhhcc------chhHHHHHHHHHHHHHHHHHhcccccccCCC
Q 026854 150 TIYAPEIYPTSARTTGAGVAS-AVGRVGGMVCPLVAVGLVTSC------HLRLAVILFEVVFVLAIASSLLFPFETKGRE 222 (232)
Q Consensus 150 ~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 222 (232)
..+++|.+|++.|+++.|+.+ ....+|..++|.+.|++.++. ||+..+.+.+++.+++.+..+++.||+++.-
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 889999999999999999997 567899999999999999974 5788888888888888888888888876543
No 68
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.78 E-value=3.5e-17 Score=131.40 Aligned_cols=190 Identities=15% Similarity=0.168 Sum_probs=123.8
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHH
Q 026854 19 FFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAII 98 (232)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 98 (232)
++++++++..+.........+......+....+.|.+.++.+ .+..+.+...+...++.+++.++.|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~g~~~~g~l 289 (426)
T PRK12307 221 MKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEG-----------FDTGVVSNLMTAAAFGTVLGNIVWGLC 289 (426)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344454333333333333333333344455667888886655 777777888888889999999999999
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH--HHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhh
Q 026854 99 VDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVR--MCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVG 176 (232)
Q Consensus 99 ~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 176 (232)
.||+|||+.+..+..+..+..+.....++........++.+ ....+..+..+.++.|.+|++.|+++.|+.+...+++
T Consensus 290 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~ 369 (426)
T PRK12307 290 ADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATS 369 (426)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHH
Confidence 99999999988888776665554443222111112222222 2222334566678899999999999999999999999
Q ss_pred hchhHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHhccccccc
Q 026854 177 GMVCPLVAVGLVTSCHLRLAVIL-FEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 177 ~~~~~~i~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.++|.+.+++.+..|.....++ ....+........+..||+.
T Consensus 370 ~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (426)
T PRK12307 370 GTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDRL 413 (426)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChhh
Confidence 99999999999998886544333 33333333333334445553
No 69
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.78 E-value=1.8e-17 Score=131.74 Aligned_cols=150 Identities=10% Similarity=-0.023 Sum_probs=133.2
Q ss_pred HHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh
Q 026854 46 YGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH 125 (232)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 125 (232)
+......|.+.++++ .+..+.++..+...++..++.++.|+++||+|||+++..+..+.+++.+...+.
T Consensus 26 ~~~~~~lp~i~~~~~-----------~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 26 TSVGPLLPQLRQASG-----------MSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY 94 (393)
T ss_pred hccchhHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC
Confidence 556677888887776 899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc-chhHHHHHHHHHH
Q 026854 126 QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC-HLRLAVILFEVVF 204 (232)
Q Consensus 126 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-g~~~~~~~~~~~~ 204 (232)
++.+.+++.+++.|++.+...+....++.|.+| ++|+.++++.......|..+++.+.+++.++. +|+..+.+.++..
T Consensus 95 ~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~ 173 (393)
T PRK09705 95 PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPA 173 (393)
T ss_pred cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999888888888999997 77999999999999999999999999988875 7887776655554
Q ss_pred HHH
Q 026854 205 VLA 207 (232)
Q Consensus 205 ~~~ 207 (232)
++.
T Consensus 174 ~~~ 176 (393)
T PRK09705 174 VVA 176 (393)
T ss_pred HHH
Confidence 433
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=99.78 E-value=2.1e-17 Score=133.01 Aligned_cols=164 Identities=13% Similarity=0.122 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhH-HHHH-----HHHhhhhhHHHHHHHHHhh
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLY-VDVF-----ITSFAELPGLILSAIIVDK 101 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~g~l~dr 101 (232)
++.....++.++........+....|.+.++++ .++.+.+ +..+ ...+...+++++.|+++||
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr 82 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFF-----------PAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR 82 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 344556666777788888888888998887765 4444322 2221 1233345788999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhh
Q 026854 102 IGRKLSMVLMFVLACIFLLPLVFHQSAV--------VTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVG 173 (232)
Q Consensus 102 ~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 173 (232)
+|||+.++.+..+..++.....+.++.+ .+.+.+++.|++.+...+....+++|++|+++|+++.++.....
T Consensus 83 ~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~ 162 (434)
T PRK15075 83 VGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQ 162 (434)
T ss_pred hchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHH
Confidence 9999999999999999998888876654 35778899999988888888899999999999999999999888
Q ss_pred hhhhchhHHHHHHHh--------hccchhHHHHHHHH
Q 026854 174 RVGGMVCPLVAVGLV--------TSCHLRLAVILFEV 202 (232)
Q Consensus 174 ~~g~~~~~~i~~~l~--------~~~g~~~~~~~~~~ 202 (232)
++|..+++.+++.+. +..||+..|++...
T Consensus 163 ~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 163 QVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 888888877776652 46789988876443
No 71
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.77 E-value=1.5e-17 Score=129.78 Aligned_cols=167 Identities=20% Similarity=0.182 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH
Q 026854 34 LWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV 113 (232)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 113 (232)
.....+......+......|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~ 72 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLG-----------LSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLL 72 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHH
Confidence 344556666777777778888887665 788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccch
Q 026854 114 LACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~ 193 (232)
+..++.+.....++.+...+.+++.|++.+...+...++..|.+|+++|++..++.+....+|..++|.+.+.+.+..+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (352)
T cd06174 73 LFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW 152 (352)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 99999998888888888899999999999888999999999999999999999999999999999999999999998889
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 026854 194 RLAVILFEVVFVLAIASS 211 (232)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~ 211 (232)
+..+.+.+....+..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 153 RWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888777666655444
No 72
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.77 E-value=3.1e-17 Score=133.83 Aligned_cols=170 Identities=12% Similarity=0.052 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh-hchHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK-IGRKL 106 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~ 106 (232)
.+.++.+++..++..+.+|....+.+.+.++.. |.+..+................+++|+++|| +|||+
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l----------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQL----------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 355777778888888999999999998884322 3777777776666555555556789999999 59999
Q ss_pred HHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhhhhhhhhhccccccccch--hhhhhHHHHHhhhhhhchhHHH
Q 026854 107 SMVLMFVLACIFLLPLVFHQ-SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSA--RTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~~~i 183 (232)
.+..+..+..++...+.+.+ +...+.+.+.+.+++.+...+...++++|++|++. |..+.++.+...++|+.++|.+
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 99999999998877777653 34445566677888888778888899999998653 4567888899999999999999
Q ss_pred HHHHhhccchhHHHHHHHHHHHHH
Q 026854 184 AVGLVTSCHLRLAVILFEVVFVLA 207 (232)
Q Consensus 184 ~~~l~~~~g~~~~~~~~~~~~~~~ 207 (232)
.+++.+..||+..|.+.++...++
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHH
Confidence 999999999999998876544443
No 73
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.77 E-value=8.8e-18 Score=134.55 Aligned_cols=169 Identities=13% Similarity=0.073 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
.+...+.........|.+.++.+ .+..+.++..+...++..+++++.|+++||+|||+++..+..+.++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMT-----------GSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------CCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 33444444455556677765554 6778899999999999999999999999999999998888777666
Q ss_pred HHHHHHh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 118 FLLPLVF-----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 118 ~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
+...... .++.+.+.+.+++.|++.+...+...+++.|..|+++|+++.++.+....+|..++|.+++.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~ 174 (417)
T PRK10489 95 GFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG 174 (417)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh
Confidence 5554432 34566677778888888777778888899999999999999999999999999999999999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 193 LRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
|++.+.+.++..++..+... ..||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~-~l~~~ 199 (417)
T PRK10489 175 VAWNYGLAAAGTFITLLPLL-RLPAL 199 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 88888776666655554443 34554
No 74
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.77 E-value=2.3e-17 Score=133.39 Aligned_cols=158 Identities=13% Similarity=0.034 Sum_probs=130.2
Q ss_pred HHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh
Q 026854 46 YGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH 125 (232)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 125 (232)
+....+.|.+.++.+ .+..+.++..+...+...++.++.|+++||+|||++++.+..+..++.+...+.
T Consensus 36 ~~~~~~~~~i~~~~g-----------~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 104 (455)
T TIGR00892 36 KAVTVFFKELQQIFQ-----------ATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS 104 (455)
T ss_pred cchhhhHHHHHHHhC-----------cchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh
Confidence 455667788877766 888888999888888889999999999999999999999998888888887777
Q ss_pred hhHHHHHHH-HHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHH
Q 026854 126 QSAVVTTVL-LFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVF 204 (232)
Q Consensus 126 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~ 204 (232)
++.+.+++. +++.|++.+...+.....+.|++| ++|+++.++.+....+|..++|.+.+.+.+..||+..|++.+++.
T Consensus 105 ~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 105 SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLL 183 (455)
T ss_pred hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 777766543 467777777655666777889886 789999999999999999999999999999999999999988877
Q ss_pred HHHHHHHhccc
Q 026854 205 VLAIASSLLFP 215 (232)
Q Consensus 205 ~~~~~~~~~~~ 215 (232)
++..+..++..
T Consensus 184 ~~~~v~~~~~~ 194 (455)
T TIGR00892 184 LHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHhC
Confidence 66555444443
No 75
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.77 E-value=6.1e-17 Score=128.72 Aligned_cols=181 Identities=10% Similarity=0.041 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
+.+...+..+.....++....|.|.+.++.+ .+..+.+...+...++.+++.++.|++.||+|||+.+.
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g-----------~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~ 274 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIEIG-----------ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLM 274 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Confidence 3444444555556677788888999987655 78888889999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccc-cchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 110 LMFVLACIFLLPLVF-HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYP-TSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
.+..+..++...+.. .++.... ..++.+++.+...+.......+..+ ++.|++..|+.+..+.+++.++|.+.|++
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l 352 (393)
T PRK09705 275 LALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL 352 (393)
T ss_pred HHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777666554443 2222222 2334566666666766666667664 67899999999999999999999999999
Q ss_pred hhccc-hhHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 026854 188 VTSCH-LRLAVILFEVVFVLAIASSLLFPFETKGREL 223 (232)
Q Consensus 188 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 223 (232)
.|..| +...+.+..++.++..+....+.||++++..
T Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 353 RSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 99987 4555556666666666666777788876654
No 76
>PRK09952 shikimate transporter; Provisional
Probab=99.77 E-value=1.4e-16 Score=128.28 Aligned_cols=178 Identities=15% Similarity=0.178 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
........++.....|....|.|.+.++.. +.+...........++...++.++.|+++||+|||+.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~----------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~ 321 (438)
T PRK09952 252 FLKIIALRLCELLTMYIVTAFALNYSTQNL----------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYIT 321 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 333334455566677777788888874322 2555544445555667778889999999999999999888
Q ss_pred HHHHHHHHHHHHHh---h-hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhh-hhhchhHHHHH
Q 026854 111 MFVLACIFLLPLVF---H-QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR-VGGMVCPLVAV 185 (232)
Q Consensus 111 ~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~i~~ 185 (232)
+..+..++.+.... . ++........++.+++.+...+..+++.+|.+|++.|+++.++.+..+. +++.++|.+.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g 401 (438)
T PRK09952 322 GALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAA 401 (438)
T ss_pred HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 77666554433322 1 1233333344555666667778888999999999999999999877765 89999999999
Q ss_pred HHhhccc--hhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 186 GLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 186 ~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
++.+..+ |...+.+.+++.+++.+..+ ..+|++
T Consensus 402 ~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~~~ 436 (438)
T PRK09952 402 ALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKDNQ 436 (438)
T ss_pred HHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccccc
Confidence 9988553 55556555556565555544 346644
No 77
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.77 E-value=4.2e-17 Score=128.72 Aligned_cols=173 Identities=16% Similarity=0.058 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH-HHHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL-MFVL 114 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~-~~~~ 114 (232)
.++...+........+|.+.+ +.+ .+..+.++..+...+...+.+++.|+++||+|||+.++. +...
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 73 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVR-----------ARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLL 73 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence 345555555566666776653 444 888999999999999999999999999999998887654 5555
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhh--hHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 115 ACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTG--AGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
..++.......++.+.+++.+++.+.+.+...+....+..|..|++.|+.+ .+......++|..++|.+.+.+.+..+
T Consensus 74 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~ 153 (375)
T TIGR00899 74 AALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG 153 (375)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc
Confidence 555666666677777777777777766666777778888898888777754 577777788999999999999999899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 193 LRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
|+..+++.+.+.++..+..+++.||.++
T Consensus 154 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 154 FTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 9999999888777776666665676543
No 78
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.77 E-value=5e-17 Score=130.80 Aligned_cols=183 Identities=12% Similarity=0.034 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh--ch-H
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI--GR-K 105 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--gr-r 105 (232)
+.++...+..+.....++....|.|.+.++.. +.+..+.+...+...++..++.++.|+++||+ ++ |
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~ 312 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETL----------GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRG 312 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcc
Confidence 34555555555566666777788999984432 37888888888899999999999999999999 33 3
Q ss_pred HHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHH
Q 026854 106 LSMVLMFVLACIFLLPLV--FHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 183 (232)
...........+...... ...+........+..|++..+.........+|.+|++.|+++.|+.+...++|+.++|.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~ 392 (434)
T PRK11663 313 PMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP 392 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence 322222222121111111 122222222333333433333333445567899999999999999999999999999999
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 184 AVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 184 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
.|++.++.|+...+...+++.++..+..+...++++++
T Consensus 393 ~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 393 LAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 99999999999999888888877776666555444433
No 79
>PRK09952 shikimate transporter; Provisional
Probab=99.76 E-value=1.1e-16 Score=128.90 Aligned_cols=181 Identities=12% Similarity=-0.015 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHH-----HHHHhhhhhHHHHHHHHHhh
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDV-----FITSFAELPGLILSAIIVDK 101 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr 101 (232)
++......+.++...+....+....|.+.. +... +.++.. ++.. ....++..+++++.|+++||
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr 90 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFP---------QVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDR 90 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------CCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 344445555556555555555555554332 2210 133332 3222 34456678899999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhh
Q 026854 102 IGRKLSMVLMFVLACIFLLPLVFHQSAV--------VTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVG 173 (232)
Q Consensus 102 ~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 173 (232)
+|||+.+..+..+.+++.++..+.++.. .+.+.+++.|++.++..+....++.|++|+++|+...+......
T Consensus 91 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~ 170 (438)
T PRK09952 91 LGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGY 170 (438)
T ss_pred hccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999988877754 47788999999999999998999999999999999999888888
Q ss_pred hhhhchhHHHHHHHhh--------ccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 174 RVGGMVCPLVAVGLVT--------SCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 174 ~~g~~~~~~i~~~l~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.+|..+++.+...+.. ..||+..|++.++..++. +......||++
T Consensus 171 ~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 171 GVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 8888888777666542 468998888766654443 33334456654
No 80
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.76 E-value=4.2e-17 Score=128.49 Aligned_cols=160 Identities=21% Similarity=0.231 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
.+...........+.+.+.++.+ .+..+.+.......++..++.++.|+++||+|||+.+.++..+..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 214 FFLNAVSGLLLIGLYKPYGQSLG-----------LSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAV 282 (377)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 33333333334444555655544 6667778888889999999999999999999999999988888888
Q ss_pred HHHHHHhhhh--HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhH
Q 026854 118 FLLPLVFHQS--AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRL 195 (232)
Q Consensus 118 ~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~ 195 (232)
+...+...++ ........++.+++.+...+....+.+|.+|+++|+++.|+.+....+|+.++|.+.|.+.+..|++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 362 (377)
T TIGR00890 283 GMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEY 362 (377)
T ss_pred HHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhh
Confidence 7776665443 22233445566666766677778889999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHH
Q 026854 196 AVILFEVVFVLAI 208 (232)
Q Consensus 196 ~~~~~~~~~~~~~ 208 (232)
.+.+.+++.+++.
T Consensus 363 ~f~~~~~~~~~~~ 375 (377)
T TIGR00890 363 TFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHhc
Confidence 8887776666543
No 81
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.76 E-value=1.3e-16 Score=127.34 Aligned_cols=177 Identities=15% Similarity=0.037 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
.++.+...++...+.........|.+.++.+ .+..+.++..+...++..+++++.|++.||+|||+.+.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~-----------~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~ 72 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFT-----------LTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGIL 72 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 3445555666666666666677888877766 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 110 LMFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
.+..+.+++...... .++.+.+.+.+++.|++.+...+....++.+..|++.|++..++.+...++|..++|.+.+.
T Consensus 73 ~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 73 LGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888877544 34677788888999999999999999999999999999999999999999999999999987
Q ss_pred Hhhc--------------------------cchhHHHHHHHHHHHHHHHHHh-ccccc
Q 026854 187 LVTS--------------------------CHLRLAVILFEVVFVLAIASSL-LFPFE 217 (232)
Q Consensus 187 l~~~--------------------------~g~~~~~~~~~~~~~~~~~~~~-~~~~e 217 (232)
+... .+|+.+|.+.+++.++..+... ...||
T Consensus 153 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 153 LILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred HHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7532 3588888877776665544432 22454
No 82
>PRK15075 citrate-proton symporter; Provisional
Probab=99.76 E-value=1.1e-16 Score=128.97 Aligned_cols=150 Identities=15% Similarity=0.189 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHH
Q 026854 35 WVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVL 114 (232)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 114 (232)
....+.....++....|.|.+.++.. +.+..+.++......++.+++.++.|+++||+|||+.++.+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~ 313 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVL 313 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34444455667778888999886532 27777777888888899999999999999999999988776554
Q ss_pred HHHHHHH-HH-h--hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhh-hhchhHHHHHHHhh
Q 026854 115 ACIFLLP-LV-F--HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRV-GGMVCPLVAVGLVT 189 (232)
Q Consensus 115 ~~~~~~~-~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 189 (232)
..+.... .. . .++........++.+++.+...+..+.+.+|.+|++.|+++.++.+..+.. ++.++|.+.+++.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 314 AILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4332221 11 1 122222333334445555566666778889999999999999998777664 58889999999999
Q ss_pred ccchh
Q 026854 190 SCHLR 194 (232)
Q Consensus 190 ~~g~~ 194 (232)
..|+.
T Consensus 394 ~~g~~ 398 (434)
T PRK15075 394 VTGDK 398 (434)
T ss_pred hcCCc
Confidence 88853
No 83
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.75 E-value=2.8e-16 Score=126.42 Aligned_cols=183 Identities=21% Similarity=0.246 Sum_probs=113.3
Q ss_pred chhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHH
Q 026854 18 SFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAI 97 (232)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (232)
++++++++ ++..+......+.....+|....|.|.+.++.. +.+..+.+....+..++..++.++.|+
T Consensus 234 ~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~----------g~s~~~~~~~~~i~~~~~~i~~~~~G~ 301 (432)
T PRK10406 234 SLKGLWRN--RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTA----------GMHANVASGIMTAALFVFMLIQPLIGA 301 (432)
T ss_pred cHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666532 222222222233446677888889999885432 367777777777777888888999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhh
Q 026854 98 IVDKIGRKLSMVLMFVLACIFLLPLVF----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVG 173 (232)
Q Consensus 98 l~dr~grr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 173 (232)
++||+|||+.+.+...+..+....... .++.........+..+..+...+..+.+.+|.+|++.|+++.|+.+..+
T Consensus 302 l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g 381 (432)
T PRK10406 302 LSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVA 381 (432)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHH
Confidence 999999999887766654443332221 1122222222222223333344567788999999999999999999887
Q ss_pred hh-hhchhHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHhc
Q 026854 174 RV-GGMVCPLVAVGLVTSCHLRL-AVILFEVVFVLAIASSLL 213 (232)
Q Consensus 174 ~~-g~~~~~~i~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~~ 213 (232)
++ ++...|.+.+.+ +..|++. .+++.++..+++.+..++
T Consensus 382 ~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 382 NALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 74 355578888855 5556443 344444444555444443
No 84
>PRK10133 L-fucose transporter; Provisional
Probab=99.75 E-value=2.6e-16 Score=126.65 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=131.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
+.+...+....+.++...+.........|.+.++++ .+..+.++..+...++..+++++.|+++||+||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~-----------~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~ 90 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFT-----------LTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSY 90 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 335556666777777777888888888999877766 889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH
Q 026854 105 KLSMVLMFVLACIFLLPL---VFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
|+++..+..+..++.++. ...++.+.+.+.+++.|++.+...+....++.|..|+++|...+++.+....+|..++|
T Consensus 91 r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~ 170 (438)
T PRK10133 91 KAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAV 170 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988765 34678888889999999999999999899888987777777789999999999999999
Q ss_pred HHHHHHh
Q 026854 182 LVAVGLV 188 (232)
Q Consensus 182 ~i~~~l~ 188 (232)
.+++.+.
T Consensus 171 ~~g~~l~ 177 (438)
T PRK10133 171 VFGQSLI 177 (438)
T ss_pred HHHHHHH
Confidence 9887654
No 85
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.75 E-value=2.3e-16 Score=125.63 Aligned_cols=166 Identities=10% Similarity=0.057 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 42 AFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
...+.....+.|.+..+.+ . .+.+.......++.+++.++.|++.||+|||+.+..+..+..++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~ 295 (399)
T PRK05122 229 SIGFGTIATFITLYYAARG-----------W--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLL 295 (399)
T ss_pred HHHHHHHHHHHHHHHHHcc-----------c--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3344455566677665433 3 23345556677888899999999999999999998888888877777
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHH
Q 026854 122 LVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFE 201 (232)
Q Consensus 122 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~ 201 (232)
....++.+...+..++.|++.+...+.......|..|++.|+++.|+.+....+|..++|.+.|++.+..|++..+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 375 (399)
T PRK05122 296 LWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAA 375 (399)
T ss_pred HHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 76666766666777788888877777777778899999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhcccccccCC
Q 026854 202 VVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 202 ~~~~~~~~~~~~~~~e~~~~ 221 (232)
++.+++.+..++. ++++++
T Consensus 376 ~~~~~~~~~~~~~-~~~~~~ 394 (399)
T PRK05122 376 LAALLGLALTWLL-YRRAPR 394 (399)
T ss_pred HHHHHHHHHHHHh-cccccc
Confidence 8777776666554 444333
No 86
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.75 E-value=2.3e-16 Score=125.40 Aligned_cols=163 Identities=10% Similarity=0.105 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 026854 43 FSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPL 122 (232)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 122 (232)
..++....+.|.+.++.. +.+..+.+.......++.+++.++.|+++||+|||+.+..+.....+.....
T Consensus 230 ~~~~~~~~~~p~~l~~~~----------~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK15011 230 GTNSLYIINMPLFIINEL----------HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM 299 (393)
T ss_pred HHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 344445567887774432 3777777777777777888899999999999999998877666555544444
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHH
Q 026854 123 VFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEV 202 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~ 202 (232)
...++.+...+.+++.++..+...+....+..|.+|++ |+++.++.+...++|..++|.+.|.+.+..|++..+.+..+
T Consensus 300 ~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~ 378 (393)
T PRK15011 300 LMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALV 378 (393)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44555555555666666666555566667788999864 89999999999999999999999999998899888877777
Q ss_pred HHHHHHHHHhccccc
Q 026854 203 VFVLAIASSLLFPFE 217 (232)
Q Consensus 203 ~~~~~~~~~~~~~~e 217 (232)
..+++.+..++. ||
T Consensus 379 ~~~~~~~~~~~~-~~ 392 (393)
T PRK15011 379 MIIATLFCLLRI-KD 392 (393)
T ss_pred HHHHHHHHHHhh-cC
Confidence 766666555543 54
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.75 E-value=4.7e-16 Score=122.64 Aligned_cols=155 Identities=14% Similarity=0.115 Sum_probs=131.4
Q ss_pred HHHHHHHHhhcCCCCCCccccccCCCCchh-hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh
Q 026854 47 GAVLLTSKLSSGDSKCGSKVLHADKSKDNS-LYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH 125 (232)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 125 (232)
......|.+.++.+ .+..+ .+........+..++.++.|+++||+|.|+++.++.+...+...+..+.
T Consensus 44 n~s~a~p~L~~elg-----------lT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa 112 (511)
T TIGR00806 44 GESFITPYLLTVLN-----------FTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG 112 (511)
T ss_pred hHHHHHHHHHHHcC-----------CCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 34445676666655 88888 9999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHH---HHH
Q 026854 126 QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVIL---FEV 202 (232)
Q Consensus 126 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~---~~~ 202 (232)
++...+.+.+++.|++.++.. ....++..++|+++|+++.|+.+....+|.++++.+.++ ...+||+....+ ...
T Consensus 113 ~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 113 TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHH
Confidence 999999999999999999988 999999999999999999999999999999999999999 556788754433 233
Q ss_pred HHHHHHHHHhcc
Q 026854 203 VFVLAIASSLLF 214 (232)
Q Consensus 203 ~~~~~~~~~~~~ 214 (232)
...++.++.+++
T Consensus 191 s~~~a~~~a~~L 202 (511)
T TIGR00806 191 FMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHHHhC
Confidence 333444444444
No 88
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.75 E-value=7.9e-17 Score=129.17 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=120.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+..+.+...++..++..++.++.|++.||+|||+.+..+..+..+......+.++.+.+.....+.++..+...+....
T Consensus 259 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 338 (420)
T PRK09528 259 QGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFK 338 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678888888889999999999999999999999888888888777777777777777777777777666677778
Q ss_pred ccccccccchhhhhhHH-HHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccc
Q 026854 152 YAPEIYPTSARTTGAGV-ASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
++.|.+|++.|++..+. .+....+|..++|.+.|++.|..|++..+...+++.++..++.++..++
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 89999999999988766 5667789999999999999999999999998888877766666655444
No 89
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.74 E-value=2e-16 Score=127.92 Aligned_cols=176 Identities=16% Similarity=0.192 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh--chHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI--GRKL 106 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~ 106 (232)
+.++...+..++.....+....|.|.+.++.. +.+..+.+.......++.+++.++.|+++||+ |||+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~----------g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVK----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 44555556666666666778889999997643 37777778888888899999999999999999 5554
Q ss_pred HH-HHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch-hHH
Q 026854 107 SM-VLMFVLACIFLLPLVF--HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV-CPL 182 (232)
Q Consensus 107 ~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~ 182 (232)
.. .....+..++...... ..+.....+..+..+.+..+.......+..|.+|++.||++.|+.+...++|+.+ +|.
T Consensus 323 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~ 402 (452)
T PRK11273 323 ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 402 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhh
Confidence 32 2222222222222222 2233333333444444333333334456779999999999999999998888655 799
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+.|++.|+.|++..|.+.++.++++.+....+
T Consensus 403 v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 403 IVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred hHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989988888777776655544
No 90
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.74 E-value=7.7e-17 Score=109.36 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=119.3
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchh
Q 026854 83 ITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSAR 162 (232)
Q Consensus 83 ~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r 162 (232)
...++..++.++.|++.||+|||+.+..+.....++.+.....++.+...+..++.+++.+...+....+..|.+|+++|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 34567888999999999999999999999888888888777777888888888899988888889999999999999999
Q ss_pred hhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 163 TTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 163 ~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+++.++.+....++..++|.+.+.+.+..+|+..+.+.+....+..+..++..||+
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999988998888888888777777777666654
No 91
>PRK03699 putative transporter; Provisional
Probab=99.74 E-value=1.2e-16 Score=127.07 Aligned_cols=176 Identities=11% Similarity=0.086 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
.+.++...+..++.....+....|.|.+.++.. +.+..+.+...+...++..++.++.|+++||++||+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 273 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKF----------GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI 273 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Confidence 344555555566666667788889999985432 3788888888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 108 MVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
+.....+..+........++.....+..++.|++.+..++...++..|..|.+ +++..+.......+|+.++|.+.|++
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l 352 (394)
T PRK03699 274 LTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPI 352 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 88877776666555555555555556667777777777777777777877644 67778888888999999999999999
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 188 VTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 188 ~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
.+..|++..++..+++..++.+.....
T Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 353 VAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 999999988888777777665544433
No 92
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.74 E-value=2.1e-16 Score=121.49 Aligned_cols=183 Identities=17% Similarity=0.111 Sum_probs=151.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 026854 23 FSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI 102 (232)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 102 (232)
.|+..+|.++...+....+....+......+.+.++.+ .|+.|.++...+..+...+..++.|.+.||+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~-----------LS~~q~~ll~aiPil~GallRl~~g~l~drf 76 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFG-----------LSEGQKGLLVAIPILVGALLRLPYGFLTDRF 76 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC-----------CCHHHHHHHHHHHHHHhHHHHHHHHhhhccc
Confidence 34556676777666666666666667766777766665 9999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch
Q 026854 103 GRKLSMVLMFVLACIFLLPLVFHQS---AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 103 grr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
|.|++..++.++..+-.+...+..+ .+.++++.++.|+. |+.++....++++++|++++|.++|+.. .+|+|..+
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av 154 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV 154 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHH
Confidence 9999999999999988888887433 34677777777654 4667889999999999999999999999 99999999
Q ss_pred hHHHHHHHhhccc---hhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 180 CPLVAVGLVTSCH---LRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 180 ~~~i~~~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
..++.+.+....| |+....++....++..+..++...+.
T Consensus 155 ~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 155 AQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999988 88888888888888777777766443
No 93
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.74 E-value=7e-16 Score=122.22 Aligned_cols=169 Identities=7% Similarity=-0.127 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
|+++...+..+...........+.|.+.++.+ .+....+.......++.+++.++.+++.||+|+|+.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g-----------~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l 273 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAG-----------ISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL 273 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH
Confidence 34444444455555556666667788887765 8888888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHH-hhhhhhchhHHHHHHH
Q 026854 109 VLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASA-VGRVGGMVCPLVAVGL 187 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~~g~~~~~~i~~~l 187 (232)
.++.+...+......+.++.+.++...++.++..+...+....++.+. |+++|+++.++++. ...+|..++|.++|++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l 352 (382)
T TIGR00902 274 LISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFI 352 (382)
T ss_pred HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888888888888899999999999999999999988 99999999999874 4579999999999999
Q ss_pred hhccchhHHHHHHHHHHHHHHHH
Q 026854 188 VTSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 188 ~~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
.|+.|. ..++..+++.+++.++
T Consensus 353 ~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 353 YPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHhccH-HHHHHHHHHHHHHHHH
Confidence 999985 5677777766655443
No 94
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.73 E-value=3e-16 Score=124.35 Aligned_cols=174 Identities=20% Similarity=0.254 Sum_probs=123.5
Q ss_pred chhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHH
Q 026854 18 SFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAI 97 (232)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (232)
+.++.+++ +++.++......+......+....+.|.+.++.. +.+..+.+.......++..++.++.|+
T Consensus 209 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~ 277 (394)
T TIGR00883 209 PIRETLTK-HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTL----------GLSANSALLVLMLSLILFFITIPLSGA 277 (394)
T ss_pred CHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444432 2234555555566666677777788888884322 267777888888888999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHH-HHH-Hh--hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHh-
Q 026854 98 IVDKIGRKLSMVLMFVLACIFL-LPL-VF--HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAV- 172 (232)
Q Consensus 98 l~dr~grr~~~~~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~- 172 (232)
++||+|||+.+.....+..+.. ... .. .++.+......++.+++.+...+...++.+|.+|++.|+++.++.+..
T Consensus 278 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 357 (394)
T TIGR00883 278 LSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLA 357 (394)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhH
Confidence 9999999998775554444333 121 12 234445555566777777778888999999999999999999986554
Q ss_pred hhhhhchhHHHHHHHhhccc-hhHHHHHHHH
Q 026854 173 GRVGGMVCPLVAVGLVTSCH-LRLAVILFEV 202 (232)
Q Consensus 173 ~~~g~~~~~~i~~~l~~~~g-~~~~~~~~~~ 202 (232)
..+|+.++|.+.|++.++.| |+...+....
T Consensus 358 ~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 358 GAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred HHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 46788899999999999988 5544444333
No 95
>PRK03545 putative arabinose transporter; Provisional
Probab=99.73 E-value=7.4e-16 Score=122.44 Aligned_cols=162 Identities=13% Similarity=0.038 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 42 AFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
....+....+.+.+.++.. +.+..+.+.......++.+++.++.|+++||+|||.... +..+..+....
T Consensus 218 ~~~~~~~~~~~~~~l~~~~----------g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~ 286 (390)
T PRK03545 218 VTAHFTAYSYIEPFVQQVA----------GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLL 286 (390)
T ss_pred HHHHHHHHHHHHHHHHHhc----------CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHH
Confidence 3333444445555554432 377778888888889999999999999999999887544 44434443333
Q ss_pred H-HhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHH
Q 026854 122 L-VFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILF 200 (232)
Q Consensus 122 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~ 200 (232)
. ...++.+...+..++.|++.....+.....+.|..| +.|+++.|+.+....+|..+||.+.|++.++.|++..+...
T Consensus 287 l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~ 365 (390)
T PRK03545 287 LLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVG 365 (390)
T ss_pred HHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHH
Confidence 2 334555666666777777766666666777778776 57899999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhccc
Q 026854 201 EVVFVLAIASSLLFP 215 (232)
Q Consensus 201 ~~~~~~~~~~~~~~~ 215 (232)
+.+.+++.+......
T Consensus 366 ~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 366 AALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888777766554
No 96
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.73 E-value=7.9e-16 Score=122.73 Aligned_cols=172 Identities=15% Similarity=0.176 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
|.++...+..++.....+....+.|.+.++.+ .+..+.+.......++..++.++.|+++||+|||+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAELG-----------FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV 290 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 34455555666666777888889999987665 7777778888888899999999999999999988866
Q ss_pred H-HHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHH
Q 026854 109 V-LMFVLACIFLLPLVF-----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 109 ~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
. .+.....+....+.. .++.+...+..++.|++.+...+. .....|..| ++|+++.|+.+....+++.++|.
T Consensus 291 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 291 RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHH
Confidence 4 333333333222221 234444555666677666655443 445567655 58999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHhc
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
+.+.+.+..|+...+++.+++.+++.+...+
T Consensus 369 i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 369 IAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888887777665544
No 97
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.72 E-value=9.4e-16 Score=119.58 Aligned_cols=171 Identities=23% Similarity=0.311 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH-HHHHH
Q 026854 33 LLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL-SMVLM 111 (232)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~ 111 (232)
...+..+...........+.|.+.++.. +.+..+.+.......++..++.++.+++.||+|||+ .+..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
T cd06174 179 LLALAFFLLSFGYYGLLTYLPLYLQEVL----------GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3333444555556666677787776542 377888899999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 112 FVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
..+..++.+.....++.+...+..++.+++.+...+....+..|..|+++|++..++.+...+++..++|.+.+.+.+..
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~ 328 (352)
T cd06174 249 LLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328 (352)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99988888888887777778888888999999999999999999999999999999999999999999999999999988
Q ss_pred chhHHHHHHHHHHHHHHHHHhc
Q 026854 192 HLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 192 g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
+++..+.+.+++.+++.+..++
T Consensus 329 ~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 329 GYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred CcchHHHHHHHHHHHHHHHhee
Confidence 9998899888888877765543
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.72 E-value=1.4e-15 Score=124.55 Aligned_cols=166 Identities=13% Similarity=0.075 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
........|.+..+.|.+.++++ .+..+.++...+.. ......++.|++.||+|||+++.++.++..+
T Consensus 36 ~~~~~g~~y~fsv~s~~L~~~lg-----------ls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~i 103 (591)
T PTZ00207 36 CSICTSFMYAFNLISGAMQARYN-----------LTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCL 103 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-----------cCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 33444556788888888887766 88888887776633 3345677899999999999999999999999
Q ss_pred HHHHHHhh------hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 118 FLLPLVFH------QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 118 ~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
+.+...+. .+.+.+.+.+++.|++.+...+.....+.++|| ++||++.|+......+|+.+.+.+...+.. .
T Consensus 104 G~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~ 181 (591)
T PTZ00207 104 GTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D 181 (591)
T ss_pred HHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 99888875 567788888899998888777888888899997 679999999999999999765444444433 2
Q ss_pred chhHHHHHHHHHHHHHHHHHhccccc
Q 026854 192 HLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
+++..+++.+++..+..++.+.+.++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 56677777777777666665555433
No 99
>TIGR00898 2A0119 cation transport protein.
Probab=99.72 E-value=6.1e-17 Score=132.78 Aligned_cols=142 Identities=19% Similarity=0.161 Sum_probs=124.8
Q ss_pred chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcc
Q 026854 74 DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYA 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 153 (232)
..+.++..++..++.+++.++.|+++||+|||++++++.++..++.+...+.++.+.+.+.+++.|++.+...+...+++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 205 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLN 205 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHh
Confidence 67788999999999999999999999999999999999999999998888889999999999999999999999999999
Q ss_pred ccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 154 PEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 154 ~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.|++|++.|+.+.++......+|.+++|.++..+.+ |+..+++.++..++..+.. ++.||+.
T Consensus 206 ~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 206 TEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESP 267 (505)
T ss_pred heecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCCh
Confidence 999999999999999988888999999888766543 8888888777766665555 4567764
No 100
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.72 E-value=5.3e-16 Score=122.84 Aligned_cols=173 Identities=12% Similarity=0.106 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH--
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL-- 106 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-- 106 (232)
++++...+..+......+....+.|.+.++.. +.+..+.+.......++.+++.++.|+++||+|||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 284 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQER----------GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS 284 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----------cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 44555566666667777777788888875533 367778888888899999999999999999999986
Q ss_pred HHHHHH------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchh
Q 026854 107 SMVLMF------VLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 107 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
...... ....+........++.+.......+ +.+..+..+..+++.+|.+|++.|+++.|+.+...++|+.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~ 363 (399)
T TIGR00893 285 LVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVAL-GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVG 363 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH-HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhh
Confidence 111111 1111111111112233333333333 333333678899999999999999999999999999999999
Q ss_pred HHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHh
Q 026854 181 PLVAVGLVTSCH-LRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 181 ~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 212 (232)
|.+.|++.+..| +...+.+.+++.+++.+..+
T Consensus 364 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 364 PIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999988 88777777777666655544
No 101
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.71 E-value=1.3e-15 Score=120.21 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=112.8
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+..+.+...........++.++.|++.||+|||+.+..+.....+........++.+...+...+.+++.+...+....
T Consensus 232 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 311 (375)
T TIGR00899 232 LPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGML 311 (375)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777777766777888899999999999999988877766655555555566666666677777777777788888
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhc
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
+..|..|++ |+++.++.+...++|..++|.+.|.+.+..|++..+.+.+++.+++.+...+
T Consensus 312 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 312 YFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 889998865 6799999999999999999999999999999998888888777776665543
No 102
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=5.6e-17 Score=123.48 Aligned_cols=154 Identities=16% Similarity=0.120 Sum_probs=141.8
Q ss_pred cCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh
Q 026854 69 ADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITV 148 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (232)
..+.++++.++......+.+++.+++.|.+.||+|+|..+++|..++..+.+++.+..+++..++.+.+.|++.......
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 34466788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccch-hhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCC
Q 026854 149 ATIYAPEIYPTSA-RTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGRE 222 (232)
Q Consensus 149 ~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 222 (232)
..+++++.+|.+. |++++|+.-.+..+|-.++|.++|.+.+..|.+.+|.+.+.++++...+.++.++.++.++
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 9999999999865 7999999999999999999999999999999999999999999999888887776555444
No 103
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.70 E-value=6.1e-17 Score=122.63 Aligned_cols=146 Identities=13% Similarity=0.059 Sum_probs=117.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+..-.+...+.+++.++++++.+|.++||+|||.+++++....++.......+.++..+...+++.|++. +..++..+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k-gnl~v~rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK-GNLSVIRA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CchHHHHH
Confidence 45566788889999999999999999999999999999999999998888888899866666699999887 45688899
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh---ccchhHHHH---HHHHHHHHHHHHHhcccccc
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT---SCHLRLAVI---LFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~---~~g~~~~~~---~~~~~~~~~~~~~~~~~~e~ 218 (232)
+++|+.+++.|+.+++.......+|-++||.++|++.+ ..|....++ +..++..........++|||
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999987 333322222 12222222234445567888
No 104
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=1.8e-17 Score=128.25 Aligned_cols=199 Identities=21% Similarity=0.288 Sum_probs=151.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCc-hhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKD-NSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
+-++++..+..+|...+.+|...++...+.+..+....+... ... ..+-....+...+.++|..+...++|++|||
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~---~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk 378 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY---HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK 378 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH---HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH
Confidence 557788888899999999999999999998766521100000 000 0112233344556667888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhH----HH-HHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchh
Q 026854 106 LSMVLMFVLACIFLLPLVFHQSA----VV-TTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
++.+-++.++.+..+.+....+. .. .....+...++.-+.......+.+|.||++.|+++.|+....+..|++++
T Consensus 379 ~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg 458 (538)
T KOG0252|consen 379 YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVG 458 (538)
T ss_pred HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHH
Confidence 99999999999999988875441 11 22223334445667778889999999999999999999999999999999
Q ss_pred HHHHHHHhh-----ccchhHHHHHHHHHHHHHHHHHhcccccccCCCchhhHHh
Q 026854 181 PLVAVGLVT-----SCHLRLAVILFEVVFVLAIASSLLFPFETKGRELKDAVDA 229 (232)
Q Consensus 181 ~~i~~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 229 (232)
.....++.+ ..|.+..+++++++.+++.+..+++ |||++++++|.+.+
T Consensus 459 ~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e 511 (538)
T KOG0252|consen 459 AFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNE 511 (538)
T ss_pred HHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcCh
Confidence 999999999 7788899999999998888776655 79999998876443
No 105
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.70 E-value=2.7e-15 Score=122.42 Aligned_cols=180 Identities=15% Similarity=0.146 Sum_probs=139.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh---
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI--- 102 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--- 102 (232)
..+|+.+..+.+.+.............|.+.++.+ .+..+.+....+ ... .++.+++|+++||+
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g-----------~~~~~ig~~~~~-~~~-~~~~~l~gpl~Dr~~~~ 75 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTVEN-----------IDLKTIGFFSLV-GQA-YVFKFLWSPLMDRYTPP 75 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CCHHHHHHHHHH-HHH-HHHHHHHHHHHHccccc
Confidence 34455667777777777777777788898887766 777777765322 222 26889999999999
Q ss_pred --chHHH-HHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhh
Q 026854 103 --GRKLS-MVLMFVLACIFLLPLVFH---QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVG 176 (232)
Q Consensus 103 --grr~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 176 (232)
|||+. +..+.+..+++...+.+. .+.+.+.+..++.+++.+...+...++..|++|+++|+++.++......+|
T Consensus 76 ~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG 155 (491)
T PRK11010 76 FLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLA 155 (491)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHH
Confidence 98875 667777776766666553 456667777788888888888889999999999999999999999999999
Q ss_pred hchhHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 177 GMVCPLVAVGLVT-SCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 177 ~~~~~~i~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
..+++.+.+++.+ ..||+..|++.++..++..+..++ .||++
T Consensus 156 ~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 156 MLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred HHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 9999999999988 469999999988777666555444 57764
No 106
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.70 E-value=5.1e-16 Score=123.97 Aligned_cols=138 Identities=12% Similarity=0.149 Sum_probs=116.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcccccc
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIY 157 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 157 (232)
+....+..++..++.+..|+++||+|||+.+..+.....+..+.....++.+...+..++.|++.+...+...+...+..
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC
Confidence 44455567788888999999999999999999888877777766666666666777777888888888888888888999
Q ss_pred ccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc
Q 026854 158 PTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 215 (232)
Q Consensus 158 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 215 (232)
|++.|++..++.+....+|..++|.+.|.+.+..|++..|.+.+++.+++.+..+...
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988888887777666544
No 107
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=8.9e-16 Score=118.03 Aligned_cols=177 Identities=18% Similarity=0.186 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
.+++|...+.++.....+-++..++|.|.++.. +.+..+++.......+...+..+++|+++||+|.+|+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f----------g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv 286 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF----------GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV 286 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH
Confidence 477888888999998899999999999996654 5888888888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchh
Q 026854 108 MVLMFVLACIFLLPLVFH-------QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
+......++++....... .+........+..+++.+..+..++.+++..+|.+ -|.+.|+....+++|++.-
T Consensus 287 ~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~l 365 (417)
T COG2223 287 TLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFL 365 (417)
T ss_pred HHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccch
Confidence 999999998888887773 34555556666777788888888999999999774 5888999999999999999
Q ss_pred HHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHhccc
Q 026854 181 PLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFP 215 (232)
Q Consensus 181 ~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 215 (232)
|...+...+.+| +...|+++..+.+++.+..+...
T Consensus 366 p~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 366 PLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred hHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 67778888888887777655543
No 108
>PRK12382 putative transporter; Provisional
Probab=99.70 E-value=1.6e-15 Score=120.51 Aligned_cols=160 Identities=15% Similarity=0.004 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 026854 43 FSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPL 122 (232)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 122 (232)
........+.|.+.++.+ .+ +.+.......++.+++.++.|++.||+|||+.+..+..+..++....
T Consensus 230 ~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~ 296 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKG-----------WA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLL 296 (392)
T ss_pred HHHhHHHHHHHHHHHhcC-----------Cc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHH
Confidence 334445556666665433 33 23445556677788999999999999999999998888888877776
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHH
Q 026854 123 VFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEV 202 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~ 202 (232)
...++.+...+..++.+++.+...+.......|.+|+++|+++.|+.+....+|..++|.+.+++.++.|++..+.+.++
T Consensus 297 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~ 376 (392)
T PRK12382 297 WLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAI 376 (392)
T ss_pred HHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 66666666666777778777777777778889999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhccc
Q 026854 203 VFVLAIASSLLFP 215 (232)
Q Consensus 203 ~~~~~~~~~~~~~ 215 (232)
+.+++.+..++..
T Consensus 377 ~~~~~~~~~~~~~ 389 (392)
T PRK12382 377 SAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHhhc
Confidence 8877776665543
No 109
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.69 E-value=4.8e-15 Score=118.90 Aligned_cols=150 Identities=14% Similarity=0.079 Sum_probs=135.5
Q ss_pred cCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhhh
Q 026854 69 ADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH--QSAVVTTVLLFGVRMCATGTI 146 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 146 (232)
.++.+..+.++..+....+.+++.+..|++.||+|-|+++..+.++.++..++.-.+ .+.+.+.+.+++.|++.+..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 466888999999999999999999999999999999999999999999988877663 344577899999999999999
Q ss_pred hhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 147 TVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 147 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
|....+.+.+.|+++|++..++......+|.+++-.+.|++.+. .||+..|++.+++..+..++.+.+..|+
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999998 9999999999999988877766665544
No 110
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.69 E-value=5e-15 Score=117.83 Aligned_cols=177 Identities=12% Similarity=0.060 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHh-hhhhHHHHHHHHHhhhchHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSF-AELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~grr~~~ 108 (232)
.....+..+.............|.+.. +.+ .+.++.++..+...+ +...+.+.+++ .||+|||+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~-----------~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~ 84 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVH-----------ARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSL 84 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHH
Confidence 334444455555555555566666653 334 788888888765555 55555555666 9999998865
Q ss_pred H-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhh--hhhHHHHHhhhhhhchhHHHHH
Q 026854 109 V-LMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSART--TGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 109 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~--~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+ .+.+...+......+.++.+.+.+...+.+...+...+....+..|..|++.|. ...++.+....+|..++|.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~ 164 (393)
T PRK15011 85 IVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAY 164 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4 555555555555566677766555554445444566677777888877766553 3346778888999999999999
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 186 GLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 186 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
++.++.||+..|+..++..++..+..++..||.+
T Consensus 165 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 165 ALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 9999999999998888777777766666667654
No 111
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.69 E-value=6.1e-16 Score=127.35 Aligned_cols=144 Identities=18% Similarity=0.218 Sum_probs=128.9
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+.....+..++..++..+|+++.|.++||+|||++++.+.++..++.+...++++.+.+.+.+++.|++.++...+.+.
T Consensus 115 ~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~ 194 (521)
T KOG0255|consen 115 DSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFG 194 (521)
T ss_pred CcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHh
Confidence 45556677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.+|+++++.|+.+..+ ......++.+++...+++.. +|++.+++..+...+..+. +++.||++
T Consensus 195 ~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 195 LVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 99999999999999999 88888888899999998887 7998888887777766655 55556764
No 112
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.69 E-value=2.6e-20 Score=150.57 Aligned_cols=199 Identities=25% Similarity=0.418 Sum_probs=142.4
Q ss_pred chhhhcchh-hHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHH
Q 026854 18 SFFTLFSRK-LIRTTVLLWVLFFANAF-SYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILS 95 (232)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (232)
+++++++++ +++++............ ..+....+.|.+.+..+ .+.. ........+...++.+++
T Consensus 240 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~~ 306 (451)
T PF00083_consen 240 SWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG-----------ISNS--FLATLILGLVNFLGTLLA 306 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccccccccccc-----------cccc--cccccccccccccccccc
Confidence 466677543 34555555444444433 33445556666665544 3333 334445567777888888
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHH--h---hhh----HHHHHHHHHHH-HHHHhhhhhhhhhccccccccchhhhh
Q 026854 96 AIIVDKIGRKLSMVLMFVLACIFLLPLV--F---HQS----AVVTTVLLFGV-RMCATGTITVATIYAPEIYPTSARTTG 165 (232)
Q Consensus 96 g~l~dr~grr~~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~~~~~~-g~~~~~~~~~~~~~~~e~~p~~~r~~~ 165 (232)
.++.||+|||++++.+..+++++.+.+. . ..+ .........+. ..+..+..+..+.+.+|.+|++.|+++
T Consensus 307 ~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~ 386 (451)
T PF00083_consen 307 IFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTG 386 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccc
Confidence 8999999999999999988888777664 1 121 11122222222 223335667888999999999999999
Q ss_pred hHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCchhhHHh
Q 026854 166 AGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGRELKDAVDA 229 (232)
Q Consensus 166 ~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 229 (232)
.++.+..+++++.++|.+.+.+.+..+....+.++++++.+..++.++++|||++++++|.+++
T Consensus 387 ~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 387 IGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred cccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 9999999999999999999988888775667888888888888888999999999999998775
No 113
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.69 E-value=2.1e-15 Score=123.78 Aligned_cols=201 Identities=18% Similarity=0.232 Sum_probs=147.5
Q ss_pred chhhhcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHH
Q 026854 18 SFFTLFSRKLIRTTVLLWVLFFANAF-SYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSA 96 (232)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 96 (232)
.+++++++..+++............. +......|.+.+.+..+ .+... .....+.++..+++..++.
T Consensus 283 ~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g-----------~~~~~-~~~~~~~~~v~~~~t~~~~ 350 (513)
T KOG0254|consen 283 SWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG-----------LKSDT-FLASIILGVVNFLGTLVAT 350 (513)
T ss_pred cHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcC-----------CCCch-HHHHHHHHHHHHHHHHHHH
Confidence 35667765566666655555554444 44555677788877666 33222 5667777888889999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHhhhh-------------HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhh
Q 026854 97 IIVDKIGRKLSMVLMFVLACIFLLPLVFHQS-------------AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSART 163 (232)
Q Consensus 97 ~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 163 (232)
++.||+|||+.++.+...+.++.+++..... ........+....+..+..++.+.+.+|.+|.+.|+
T Consensus 351 ~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~ 430 (513)
T KOG0254|consen 351 YLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRS 430 (513)
T ss_pred HHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHh
Confidence 9999999999999999999998887765211 112223333344455566788899999999999999
Q ss_pred hhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHH-HHhcccccccCCCchhhHHhh
Q 026854 164 TGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA-SSLLFPFETKGRELKDAVDAI 230 (232)
Q Consensus 164 ~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~ 230 (232)
++.++.....++...+.......+.+..+....+..+...+.+... ..+++.|||++++.+|.++..
T Consensus 431 ~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 431 KGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 9999999999988887777777766665435567777777777766 788889999999999877643
No 114
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.69 E-value=5.6e-15 Score=117.05 Aligned_cols=152 Identities=15% Similarity=0.092 Sum_probs=116.3
Q ss_pred HHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh
Q 026854 47 GAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ 126 (232)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 126 (232)
....+.|.+.++.+ .+..+.+.......++.+++.++.|++.||+|||+.+..+.....++..... .
T Consensus 218 ~~~~~lp~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~ 284 (381)
T PRK03633 218 SLYGLMPLYLNHQG-----------MSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S 284 (381)
T ss_pred HHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h
Confidence 34456788876655 7777888888888899999999999999999999998888777766554433 1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHH
Q 026854 127 SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 206 (232)
Q Consensus 127 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~ 206 (232)
. ........+.+.+.....|...++..|..|+++++...+..+...++|+.++|.+.|++.|+.|+...|.+.+.+.++
T Consensus 285 ~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 285 Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 1 122233444555555667888888899999988888888888888999999999999999999988888887777765
Q ss_pred HHHHHh
Q 026854 207 AIASSL 212 (232)
Q Consensus 207 ~~~~~~ 212 (232)
..+..+
T Consensus 364 ~~~~~~ 369 (381)
T PRK03633 364 YLLMLL 369 (381)
T ss_pred HHHHHH
Confidence 554443
No 115
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.69 E-value=1.5e-15 Score=124.38 Aligned_cols=147 Identities=17% Similarity=0.278 Sum_probs=111.7
Q ss_pred HHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh
Q 026854 47 GAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH 125 (232)
Q Consensus 47 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 125 (232)
....+.|.+.+ +.+ .+..+.+...+...++.+++.++.|+++||+|||+.+..+..+..+..+.....
T Consensus 293 ~~~~~lp~~l~~~~g-----------~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 361 (496)
T PRK03893 293 PIQALLPTYLKTDLG-----------YDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI 361 (496)
T ss_pred hHHHHHHHHHHhhcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 34567888884 444 788889999999999999999999999999999999888776666554443332
Q ss_pred --hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHH
Q 026854 126 --QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVV 203 (232)
Q Consensus 126 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~ 203 (232)
.+.+......++.+....+..+....+++|.+|++.|++++|+.+....+|+.++|.+.|.+.+..|+...+...+..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 362 GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 222333333333333333445667778899999999999999999999999999999999999999988777655544
Q ss_pred H
Q 026854 204 F 204 (232)
Q Consensus 204 ~ 204 (232)
.
T Consensus 442 ~ 442 (496)
T PRK03893 442 L 442 (496)
T ss_pred H
Confidence 4
No 116
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.68 E-value=7.2e-15 Score=117.25 Aligned_cols=171 Identities=15% Similarity=0.090 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh-----chHH-HH
Q 026854 35 WVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI-----GRKL-SM 108 (232)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~-~~ 108 (232)
..+++.+...+.....-+|.++++.| .+.++.++....... .+..+++|+++||+ |||| .+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g-----------~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l 71 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEG-----------LDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWL 71 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHH
Confidence 34566667777777778899998887 999999988766654 68899999999999 7765 78
Q ss_pred HHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 109 VLMFVLACIFLLPLVFH---QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
.++..+++++...+.+. .+.+.+.+..++.+.+.....+...++++|++|+++|+++.++......+|..+++.+.+
T Consensus 72 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~ 151 (402)
T PRK11902 72 LLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL 151 (402)
T ss_pred HHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence 88888887777776664 334555555556667777777889999999999999999999999988999999999999
Q ss_pred HHhhc-cchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 186 GLVTS-CHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 186 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
++.+. .||+..+++.++..++..+.. +..||++
T Consensus 152 ~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~ 185 (402)
T PRK11902 152 WLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPE 185 (402)
T ss_pred HHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCc
Confidence 98885 499999998887776655543 4456654
No 117
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.68 E-value=6e-15 Score=118.98 Aligned_cols=185 Identities=17% Similarity=0.227 Sum_probs=145.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH-
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK- 105 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr- 105 (232)
+.|.+...++.++...-+...+......|.++.- +++..+......+..+.+++|++++|++.||+|.|
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~l----------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~ 348 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVL----------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT 348 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 3455666666666666666666666666665222 38999999999999999999999999999999988
Q ss_pred -HHHHHHHHHHHHHHHHHHh--------hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhh
Q 026854 106 -LSMVLMFVLACIFLLPLVF--------HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVG 176 (232)
Q Consensus 106 -~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 176 (232)
++++.+..+..+..+...+ .++.+.+++..++.|++.|+.++...++.+|+.|+++.+.-+|++...+...
T Consensus 349 ~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 349 KRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 7877777666444443333 5677788889999999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHhcccccccCCC
Q 026854 177 GMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFPFETKGRE 222 (232)
Q Consensus 177 ~~~~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 222 (232)
+.+||.+.+.+.+.+| .+..+....++.+++.++. ...++.|+++
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 9999999999999987 5666666666666666555 4445554443
No 118
>TIGR00895 2A0115 benzoate transport.
Probab=99.68 E-value=2.6e-15 Score=119.19 Aligned_cols=153 Identities=25% Similarity=0.338 Sum_probs=117.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 026854 23 FSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI 102 (232)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 102 (232)
++++..+..+..+...+......+....+.|.+.++.+ .+..+.+.......++.+++.++.|+++||+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (398)
T TIGR00895 244 FQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELG-----------FSLSLAATGGALFNFGGVIGSIIFGWLADRL 312 (398)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33334445555555555666677777788887776655 7777888888899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH
Q 026854 103 GRKLSMVLMFVLACIFLLPLVF-HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 103 grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
|||+...... +..+....... ..+.+......++.+++.+...+...++.+|.+|++.|+++.|+.+....+|..++|
T Consensus 313 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 391 (398)
T TIGR00895 313 GPRVTALLLL-LGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGP 391 (398)
T ss_pred chHHHHHHHH-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9995544433 33333333333 455566667778888888888899999999999999999999999999999999999
Q ss_pred HHHHHH
Q 026854 182 LVAVGL 187 (232)
Q Consensus 182 ~i~~~l 187 (232)
.+.|++
T Consensus 392 ~~~G~l 397 (398)
T TIGR00895 392 ILAGYL 397 (398)
T ss_pred HhHHhc
Confidence 999875
No 119
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.68 E-value=5.3e-16 Score=129.58 Aligned_cols=159 Identities=10% Similarity=0.003 Sum_probs=130.0
Q ss_pred HHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh
Q 026854 47 GAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ 126 (232)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 126 (232)
.....++.+.++++ .+..+.++..+...++..++.++.+++.||.|||+.+.++.++++++.++..+.+
T Consensus 51 ~~~~~l~~iek~F~-----------lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 51 LVNSSLTTIERRFK-----------LSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred HHHhhchhhhhhhC-----------CCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChH
Confidence 33444566665555 8888999999999999999999999999999999999999999999888876542
Q ss_pred ---------------------------------------------------hHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 026854 127 ---------------------------------------------------SAVVTTVLLFGVRMCATGTITVATIYAPE 155 (232)
Q Consensus 127 ---------------------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e 155 (232)
....+++.+++.|++.+...+...+++.|
T Consensus 120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d 199 (633)
T TIGR00805 120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD 199 (633)
T ss_pred HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence 12346678999999999999999999999
Q ss_pred ccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc----------------------chhHHHHHHHHHHHHHHHHHhc
Q 026854 156 IYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC----------------------HLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 156 ~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
++|++.|+...++.+....+|..+++.+++++.+.+ +|+..|++.+++.++..+..++
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999887643 1566677777766666555444
Q ss_pred cccc
Q 026854 214 FPFE 217 (232)
Q Consensus 214 ~~~e 217 (232)
+ |+
T Consensus 280 ~-p~ 282 (633)
T TIGR00805 280 F-PK 282 (633)
T ss_pred C-cc
Confidence 4 44
No 120
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.67 E-value=1.7e-15 Score=122.19 Aligned_cols=179 Identities=15% Similarity=0.143 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
++...+..++.....+....|.|.+.++.. +.+..+.++......++.+++.+++|+++||+++++....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 322 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVK----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGAT 322 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHcc----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHH
Confidence 444444445555566777788999986542 3777888888888889999999999999999964332222
Q ss_pred HHHHHH---HHHHHHHh--hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhh-chhHHHH
Q 026854 111 MFVLAC---IFLLPLVF--HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGG-MVCPLVA 184 (232)
Q Consensus 111 ~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~i~ 184 (232)
+..... ++...... ..+.+......+..+....+..........|.+|++.|+++.|+.+...++++ .++|.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~ 402 (438)
T TIGR00712 323 GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 402 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH
Confidence 222211 11111111 12233333333333433222222223457799999999999999999988875 6899999
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 185 VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 185 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
|.+.|+.|+...+.+..++.+++.+..++.+||.|
T Consensus 403 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 403 GYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999988888888888888877777777765
No 121
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.67 E-value=7.4e-15 Score=131.23 Aligned_cols=117 Identities=11% Similarity=-0.026 Sum_probs=101.4
Q ss_pred chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 74 DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
....++..++..++..++++++|+++||+|||++++++.++.++..+.... .++.+.+++.+++.|++.+...+...
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHH
Confidence 344677788888999999999999999999999999888766555544333 45678888899999999999999999
Q ss_pred hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 151 IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 151 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
++++|++|+++|++++|+......+|..+++.+++++.+.
T Consensus 126 ~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 126 GIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998876
No 122
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.67 E-value=5.6e-15 Score=119.07 Aligned_cols=153 Identities=13% Similarity=0.073 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
.++...+..+......+....+.+.+.+... .+....+.......++.+++.++.++++||+|||+.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVL-----------GDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFA 291 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeec-----------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 3344444444444444444444555543322 23344556666778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhhhhhhhhccccccc-------cchhhhhhHHHHHhhhhhhchhH
Q 026854 110 LMFVLACIFLLPLVFH-QSAVVTTVLLFGVRMCATGTITVATIYAPEIYP-------TSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
.+..+.+++.+...+. ++.+...+..++.+++.+...+..+++++|..| ++.+|+..|+.+....+|..+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~ 371 (437)
T TIGR00792 292 GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAG 371 (437)
T ss_pred HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 9888877776666553 344555566677778888888888999888865 55679999999999999999999
Q ss_pred HHHHHHhhccch
Q 026854 182 LVAVGLVTSCHL 193 (232)
Q Consensus 182 ~i~~~l~~~~g~ 193 (232)
.+.|++.+..|+
T Consensus 372 ~i~g~ll~~~G~ 383 (437)
T TIGR00792 372 FLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHcCC
Confidence 999999887665
No 123
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.67 E-value=8.6e-15 Score=116.90 Aligned_cols=176 Identities=18% Similarity=0.195 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
.++++...+.+++....+.++..+.|.+.++. .+.........+..+...+..+++|+++||+|+|++
T Consensus 251 ~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~------------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v 318 (462)
T PRK15034 251 RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ------------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV 318 (462)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH------------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH
Confidence 35677788888888888888888999988553 333333334445567788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-h-----hhHHHHHHHHHHHHHHHhhhhhhhhhcccccccc---------------------c
Q 026854 108 MVLMFVLACIFLLPLVF-H-----QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPT---------------------S 160 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~---------------------~ 160 (232)
+.++.+.+.+....... . .+.+...+..+...++.|..+...+.++++.+|+ +
T Consensus 319 l~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
T PRK15034 319 TLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVT 398 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHH
Confidence 99988877776654333 1 2344444444555566666777888888888874 1
Q ss_pred hhhhhhHHHHHhhhhhhchhHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHhccc
Q 026854 161 ARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFP 215 (232)
Q Consensus 161 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 215 (232)
+-|.+.|+....+.+|+++.|.+.+...+.+| +...++.+.+..+++..+.+.+.
T Consensus 399 ~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 399 ETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788999999999999999999999988776 45567778888888777776654
No 124
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.67 E-value=5.1e-15 Score=116.20 Aligned_cols=159 Identities=16% Similarity=0.127 Sum_probs=121.0
Q ss_pred HHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh-----chHHH-HHHHHHHHHHHHHH
Q 026854 48 AVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI-----GRKLS-MVLMFVLACIFLLP 121 (232)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~~-~~~~~~~~~~~~~~ 121 (232)
.....|.+.++.+ .+.++.++.... .+...+ .+++|+++||+ ||||. ++.+..+.++....
T Consensus 7 ~~~~~~~~~~~~g-----------~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 7 VGNTLPYWLRSKN-----------VSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred HHhHHHHHHHHcC-----------CCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 3445677777766 888888888655 444444 89999999998 88886 45666666666656
Q ss_pred HHhh---hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc------
Q 026854 122 LVFH---QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH------ 192 (232)
Q Consensus 122 ~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g------ 192 (232)
+.+. .+.+.+....++.+.+.+...+...++++|++|+++|+.+.++......+|..+++.+.+.+.+..+
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~ 153 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLI 153 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 6553 3444455555566666666778889999999999999999999999999999999999999988888
Q ss_pred --hhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 193 --LRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 193 --~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
|+..+++.++..++..+..++..||++
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999998888877776665555556654
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.67 E-value=9.1e-15 Score=117.32 Aligned_cols=178 Identities=11% Similarity=0.035 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSG-DSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 107 (232)
+.++...+..++....+.....+.|.+.++ .+ .+..+.++..+...++..+++++.|+++||+|||+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-----------~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~ 78 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDING-----------LSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKH 78 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH
Confidence 445555556666666666667777777755 44 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-h-hhHHH--HHHHHHHHHHHHhhhhhhhhhccccccc--cchhhhhhHHHHHhhhhhhchhH
Q 026854 108 MVLMFVLACIFLLPLVF-H-QSAVV--TTVLLFGVRMCATGTITVATIYAPEIYP--TSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
++++..+..+....... . ..... ......+.++..+...+.......++.+ .+.++...|.......+|..++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 158 (420)
T PRK09528 79 LLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCA 158 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHH
Confidence 88766655443322111 1 11100 1111122222222222222222333332 24466778888888999999999
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 182 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 182 ~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
.+.+.+.+. +|+..+++.++..++..+..+...+|.
T Consensus 159 ~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 159 FIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred HHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccc
Confidence 999998774 788888887777766666655554443
No 126
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.67 E-value=1.1e-14 Score=130.02 Aligned_cols=143 Identities=11% Similarity=-0.012 Sum_probs=110.6
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH---HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV---LACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
...++..++..+..++.++++|+++||+|||+++..... ..+.........++.+.+++.+++.|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 345677778889999999999999999999997643222 22222222222478888999999999999999999999
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
++.|++|+++|++++|+.++...+|..++|.++|++.+..+|+..++...+..++. ++..+..|++
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 197 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKT 197 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCC
Confidence 99999999999999999999999999999999999999989987774333333333 3344444554
No 127
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.66 E-value=1.1e-14 Score=114.61 Aligned_cols=174 Identities=14% Similarity=0.131 Sum_probs=119.0
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHH
Q 026854 19 FFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAII 98 (232)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 98 (232)
+++++++ +.++.....+++....++.+..|.|.++++.+ .+.. .+....+..+...+ ..+++
T Consensus 185 ~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g-----------~s~~-~~~~~~l~~~~g~~---g~~~~ 246 (368)
T TIGR00903 185 FGALAGR---KDLWIIGAILGFGVALFDNLAIWLEAALRPAG-----------LEDI-AGDAVALAILAGLI---GVAVI 246 (368)
T ss_pred HHHHHcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CChH-HHHHHHHHHHHHHH---HHHHh
Confidence 4444433 55667777788888889999999999997654 5543 34444444444444 45788
Q ss_pred HhhhchH---HHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhh
Q 026854 99 VDKIGRK---LSMV-LMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR 174 (232)
Q Consensus 99 ~dr~grr---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 174 (232)
+||..|| +... ....+.++.........+.........+.+++.....+..+++.+|.+|++.|+++.|+.+..++
T Consensus 247 ~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~ 326 (368)
T TIGR00903 247 PDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSR 326 (368)
T ss_pred hHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHH
Confidence 8887543 3323 23333333333333333444444455556666666777788999999999999999999999999
Q ss_pred hhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 026854 175 VGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 175 ~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
+++.++|.+.+.+.. +....|.++++..+++.+...
T Consensus 327 ~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 327 AISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988774 666778888777777766654
No 128
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.66 E-value=1.9e-14 Score=117.35 Aligned_cols=145 Identities=14% Similarity=0.147 Sum_probs=122.5
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF-----HQSAVVTTVLLFGVRMCATGTI 146 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~ 146 (232)
.+....++......+..++.++++|.++||++||++++.+..+.++....+.. ..+.+.+++..++.|++.....
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 67788888888889999999999999999999999999999887765554443 3466778888889999998899
Q ss_pred hhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 026854 147 TVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 147 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 216 (232)
|...+.++|+.|+++...+.++.....++...+||.++|.+....|....|.+-++..++.........+
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999889888888877766665544444433
No 129
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=6.6e-15 Score=120.88 Aligned_cols=144 Identities=21% Similarity=0.170 Sum_probs=126.1
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccc
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAP 154 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (232)
.+.++..+...++..+++++.|+++|++|||+.++++.+...++.++...+++...+.+.+++.|++.|....+...+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 155 EIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC--HLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 155 e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
|..|++.||...+..+....+|..++ ++.+...+.. +|+..+.+..+.+++..+. .++.||+++
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 99999999999999998888777777 6666665553 7887777777777776666 667788753
No 130
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=2e-14 Score=111.40 Aligned_cols=187 Identities=13% Similarity=0.111 Sum_probs=139.7
Q ss_pred cchhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHH
Q 026854 17 SSFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSA 96 (232)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 96 (232)
.+.++.++-.++++++......++.....|....|+..++++.. +.+.+...+....++++.++|+.++|
T Consensus 199 ~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~----------g~s~~~vs~~Ll~~Gv~~~~Gn~~gG 268 (394)
T COG2814 199 GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVA----------GFSVSAVSLVLLAFGIAGFIGNLLGG 268 (394)
T ss_pred cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHcc----------CCCHhHHHHHHHHHHHHHHHHHHHHh
Confidence 33333443333355555555566555555555555555554433 48999999999999999999999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhh
Q 026854 97 IIVDKIGRKLSMVLMFVLACIFLLPLVF-HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRV 175 (232)
Q Consensus 97 ~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 175 (232)
++.|| +.|+.+.....+..+..+.+.+ .++.+...+..++.++.............++ .-++.+..+.++.....++
T Consensus 269 rl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nl 346 (394)
T COG2814 269 RLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNL 346 (394)
T ss_pred hhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHH
Confidence 99999 9888888887877777777666 4455555555666666666666666666777 4467789999999999999
Q ss_pred hhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc
Q 026854 176 GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 215 (232)
Q Consensus 176 g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 215 (232)
|...|..++|.+.|+.|+....++.+...+++.+......
T Consensus 347 gia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 347 GIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888887776665543
No 131
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.66 E-value=5.1e-15 Score=118.43 Aligned_cols=166 Identities=13% Similarity=0.150 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH-
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS- 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~- 107 (232)
+.++.....+++....++....|.|.++++.+ .+.+..+.+.......++.+++.++.|+++||++||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---------~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~ 312 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFN---------QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH 312 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH
Confidence 34555666667777778888899999997642 12566777888889999999999999999999997664
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 108 MVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
.........+.........+.........+.+++.....+..+....|.+|+++|+++.|+.+..+++|+.++|.+.|.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i 392 (412)
T TIGR02332 313 TALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGIL 392 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 33333333333322222222222222222222222233344556667889999999999999999999999999999999
Q ss_pred hhccc-hhHHHHHHHHH
Q 026854 188 VTSCH-LRLAVILFEVV 203 (232)
Q Consensus 188 ~~~~g-~~~~~~~~~~~ 203 (232)
.+..| |...+++.+++
T Consensus 393 ~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 393 KDATGSFNSGLWFVAAL 409 (412)
T ss_pred cccCCCCchhHHHHHHH
Confidence 99875 66666655543
No 132
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.65 E-value=7.3e-15 Score=116.99 Aligned_cols=144 Identities=17% Similarity=0.254 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 42 AFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
.........+.|.+..+.. +.+..+.+.......++.+++.++.|++.||+|||+.+..+.....+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~----------g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 320 (405)
T TIGR00891 251 NLYSHPIQDLLPTYLKADL----------GLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIP 320 (405)
T ss_pred HHHHhhhhhhhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHH
Confidence 3334445556676664321 377888888888999999999999999999999999988877665433332
Q ss_pred H-HhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc-hhH
Q 026854 122 L-VFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH-LRL 195 (232)
Q Consensus 122 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g-~~~ 195 (232)
. ...++.+...+..++.+++.++..+....+++|.+|++.|+++.|+.+...++|+.++|.+.|++.++.| +..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~ 396 (405)
T TIGR00891 321 VFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGT 396 (405)
T ss_pred HHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 2 2234444444444556666666677788899999999999999999999999999999999999999988 543
No 133
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.65 E-value=1.3e-14 Score=115.63 Aligned_cols=177 Identities=13% Similarity=0.070 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
|.++......++..........+.|.+.++.. +.+..+.++..+...++..++.++.|+++||+|||+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~ 71 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVN----------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL 71 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 34555666667777777777777888775432 38889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh---hh-----hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchh
Q 026854 109 VLMFVLACIFLLPLVF---HQ-----SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
+.+....++....... .+ ......+..++.+++.+...+....+..|..+ .++...|.....+++|..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g 149 (396)
T TIGR00882 72 LWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALC 149 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHH
Confidence 8776665544332211 11 11223334455566665555666555555432 33456778888889999999
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 181 PLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 181 ~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
|.+++.+.+ .+|+..|++.+++..+..+..+...||+
T Consensus 150 ~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 150 ASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998766 4899888888777776665555544543
No 134
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.65 E-value=3.7e-15 Score=116.97 Aligned_cols=147 Identities=10% Similarity=-0.021 Sum_probs=120.9
Q ss_pred HHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh
Q 026854 47 GAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ 126 (232)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 126 (232)
.....+|.+.++.+ .+..+.++..+...++..++.++.|+++||+|||+.+.++.....++.... ..+
T Consensus 18 ~~~~~lp~l~~~~~-----------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 18 SVGPLLPQIRSALG-----------MSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred cCcccHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 34556777777666 899999999999999999999999999999999999999988877776665 566
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc--hhHHHHHHHHHH
Q 026854 127 SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH--LRLAVILFEVVF 204 (232)
Q Consensus 127 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g--~~~~~~~~~~~~ 204 (232)
+.+.+.+.+++.|++.+...+.......|.+| ++|+++.++.+....+|..+++.+.+.+.+..+ |+..+...++..
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~ 164 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPA 164 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 77777888888898888777777778888886 579999999999999999999999998887653 776666655544
Q ss_pred HH
Q 026854 205 VL 206 (232)
Q Consensus 205 ~~ 206 (232)
++
T Consensus 165 ~~ 166 (355)
T TIGR00896 165 LL 166 (355)
T ss_pred HH
Confidence 33
No 135
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.64 E-value=1.3e-14 Score=118.06 Aligned_cols=174 Identities=11% Similarity=0.029 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH---
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK--- 105 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--- 105 (232)
++++...+.++......+....+.|.+..+.. +.+..+.+...++..++..++.+++|+++||+|||
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~ 321 (476)
T PLN00028 252 YRTWILALTYGYSFGVELTMDNIIAEYFYDRF----------GLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGM 321 (476)
T ss_pred chhHHHHHHHHHHHHHHHHHHhHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCc
Confidence 34444444454445555566677888764432 38888889999999999999999999999999875
Q ss_pred ----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH
Q 026854 106 ----LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 106 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
....+...+.++..+.....++.....+..++.+++.+...+..+++.+|..| +.|+++.|+.+..+++|+.++|
T Consensus 322 ~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~ 400 (476)
T PLN00028 322 RGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQ 400 (476)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHH
Confidence 22223333333333333334444444444555555555566667777787754 6899999998777777777777
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 182 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 182 ~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
.+.+ ..+..++...+.+.+++.+++.++.++.
T Consensus 401 ~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 401 LLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6654 1123357778888777777666555443
No 136
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.64 E-value=2.1e-15 Score=122.08 Aligned_cols=169 Identities=8% Similarity=0.048 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh--hchHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK--IGRKLS 107 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~grr~~ 107 (232)
.++......+.....++....+.|.+.++.+ .+..+.+...++.+++.+++.++.|+++|| +++|+.
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 310 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKDKG-----------VDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQ 310 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHH
Confidence 3444444455555566666677888876655 788888999999999999999999999997 344433
Q ss_pred HHH--HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 108 MVL--MFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 108 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
..+ +....++..+.....++.+.+.+..++.|++.+...+...+++.|.+|+++++++.|+.+....+|+.++|.+.|
T Consensus 311 ~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 311 YLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 333 233333434444445667777777888888888888888999999999999999999999999999999999999
Q ss_pred HHhhccc-hhHHHHHHHHHHHHHHH
Q 026854 186 GLVTSCH-LRLAVILFEVVFVLAIA 209 (232)
Q Consensus 186 ~l~~~~g-~~~~~~~~~~~~~~~~~ 209 (232)
.+.+..+ +...+++.+++.+++.+
T Consensus 391 ~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 391 RLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeehhcCCcchHHHHhhHHHHHHHH
Confidence 9998774 77777776666555444
No 137
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.64 E-value=5.3e-14 Score=111.56 Aligned_cols=175 Identities=10% Similarity=-0.076 Sum_probs=127.4
Q ss_pred chhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHH
Q 026854 18 SFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAI 97 (232)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (232)
++++++++ |.++...+..+...........+.|.+.++.+ .+..+.+.......++.++..++.|+
T Consensus 197 ~~~~i~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~~g~ 262 (382)
T PRK11128 197 AWKALLKE---PTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAG-----------YSASTIGYLWSLGVVAEVLIFAFSNR 262 (382)
T ss_pred hHHHHHcC---hhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCC-----------CCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555543 33333333333333444444555666765554 77778888888888899999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHh-hhhh
Q 026854 98 IVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAV-GRVG 176 (232)
Q Consensus 98 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g 176 (232)
+.||+|+|+.+..+....++..+.....++.+...+..++.|++.+...+....+..+. +++++++..++.+.. ..+|
T Consensus 263 l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 341 (382)
T PRK11128 263 LFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGS 341 (382)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999988888877777778888778888888888877777777877776 555678888887644 4577
Q ss_pred hchhHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 026854 177 GMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 208 (232)
Q Consensus 177 ~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 208 (232)
..++|.++|.+.|..|.. .++..+++.+++.
T Consensus 342 ~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 342 IAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 789999999999998864 5555555554443
No 138
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.64 E-value=3.9e-14 Score=112.14 Aligned_cols=174 Identities=16% Similarity=0.150 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHH
Q 026854 36 VLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLA 115 (232)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~ 115 (232)
+..+...........+.+.+.++.+ +.+....+...++..+++++.-...+++..|+|.|+++.++.+..
T Consensus 214 l~~~l~~~~~~~~~~f~~~yl~~~g----------g~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFFSIYLQELG----------GYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc----------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3334444444445556677777665 245566677777888999999999999999999999999999999
Q ss_pred HHHHHHHHhh-hhHHHHHHH----HHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhh-hhhhchhHHHHHHHhh
Q 026854 116 CIFLLPLVFH-QSAVVTTVL----LFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVG-RVGGMVCPLVAVGLVT 189 (232)
Q Consensus 116 ~~~~~~~~~~-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~i~~~l~~ 189 (232)
++=..+.... ++.+..... ..+.|+..+........++.+..|++.|+++.+++.... .+|..++..++|++.|
T Consensus 284 ~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 284 AVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9988887776 444433333 345888888899999999999999999999999998765 6999999999999999
Q ss_pred ccchhH------HHHHHHHHHHHHHHHHhccccccc
Q 026854 190 SCHLRL------AVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 190 ~~g~~~------~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.|.+. .+.+.+++.++..++..++.+|++
T Consensus 364 ~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 364 AFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 887553 333444444444444444445543
No 139
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.64 E-value=2.4e-14 Score=113.53 Aligned_cols=158 Identities=10% Similarity=0.054 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH
Q 026854 34 LWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV 113 (232)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 113 (232)
+.+.++.....+.....++|.+.++.+ .+..+.++..+...+...+++++.|.++||+|||........
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g-----------~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 77 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIG-----------LGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLA 77 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 444555555555566677889998776 899999999999999999999999999999998543322211
Q ss_pred -HHHHHHH-HHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 114 -LACIFLL-PLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 114 -~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
...+..+ .....++.+.+++.+.+.+.+.+...+...++..|. +++|++..|.....+.+|..++|.+.+++.+..
T Consensus 78 ~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~ 155 (382)
T TIGR00902 78 LASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF 155 (382)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111112 222456777777788777777777778877776553 577899999999999999999999999999999
Q ss_pred chhHHHHHHHHHH
Q 026854 192 HLRLAVILFEVVF 204 (232)
Q Consensus 192 g~~~~~~~~~~~~ 204 (232)
||+..+.+.....
T Consensus 156 g~~~~f~~~~~~~ 168 (382)
T TIGR00902 156 DEQNILAILTAGL 168 (382)
T ss_pred ChhHHHHHHHHHH
Confidence 9998887766553
No 140
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.64 E-value=4.4e-14 Score=113.51 Aligned_cols=180 Identities=11% Similarity=0.056 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHh----hhch
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVD----KIGR 104 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~gr 104 (232)
++++.+....++..+.+.....+.+.|.++.+ .+....+....+..+...+..++.|+++| |+||
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg-----------~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GR 72 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQELG-----------IPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGR 72 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCC
Confidence 45556666677777777777777777887776 88899999999999999999999999999 5999
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhhhH-----------------HHHHHHHHHHHHHHhhhhhhhhhccccccccchh--hh
Q 026854 105 KLSMVLM-FVLACIFLLPLVFHQSA-----------------VVTTVLLFGVRMCATGTITVATIYAPEIYPTSAR--TT 164 (232)
Q Consensus 105 r~~~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r--~~ 164 (232)
|+.++.+ .....++..++.+.++. +...+...+..++.....+...++++|..|+++| +.
T Consensus 73 Rrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~ 152 (477)
T TIGR01301 73 RRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRI 152 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHH
Confidence 9988775 55555555555553332 1222333344456666778889999999999876 57
Q ss_pred hhHHHHHhhhhhhchhHHHHHHH--hhcc-------------chhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 165 GAGVASAVGRVGGMVCPLVAVGL--VTSC-------------HLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 165 ~~~~~~~~~~~g~~~~~~i~~~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.++.....++|+.+++.+++.. .+.. +.+..|.+.+++.++..++..+..+|.+
T Consensus 153 a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 153 ANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 88888999999999999988865 2211 4566788878888888888888888864
No 141
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.64 E-value=1.1e-14 Score=115.35 Aligned_cols=134 Identities=19% Similarity=0.171 Sum_probs=105.3
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhhhhhhhhccccc
Q 026854 85 SFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAV--------VTTVLLFGVRMCATGTITVATIYAPEI 156 (232)
Q Consensus 85 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~e~ 156 (232)
.+...+++++.|+++||+|||+++..+..+..++.+...+.++.. .+.+.+++.|++.+...+....++.|.
T Consensus 45 ~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 124 (394)
T TIGR00883 45 FLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEY 124 (394)
T ss_pred HHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhc
Confidence 344567899999999999999999999999999888887765543 466778888888888888899999999
Q ss_pred cccchhhhhhHHHHHhhhhhhchhHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 157 YPTSARTTGAGVASAVGRVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 157 ~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+|+++|++..++......+|..+++.+.+.+. +..+|+..+.+.+...++.... ....||++
T Consensus 125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~ 194 (394)
T TIGR00883 125 APPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETP 194 (394)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCCh
Confidence 99999999999999999999999988876654 3467888887766655544433 23345543
No 142
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.64 E-value=1.3e-14 Score=113.86 Aligned_cols=147 Identities=12% Similarity=0.015 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHH
Q 026854 36 VLFFANAFSYYGAV-LLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVL 114 (232)
Q Consensus 36 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 114 (232)
...+......+... .+.|.+.++.. +.+..+.+.......++.+++.++.+++.||+|||+.+..+..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 286 (365)
T TIGR00900 217 LLALLFNLVFAPAIVALFPYVQSKYL----------GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFV 286 (365)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHh----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Confidence 33333334443343 56777765421 27778888888899999999999999999999999998888777
Q ss_pred HHHHHHHHHhhhh-HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 115 ACIFLLPLVFHQS-AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
.++........++ .+...+..++.+++.+...+...++..|..|++.|+++.|+.+...++++.++|.+.|++.|..|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 287 IGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7777766666553 66667777888888888888999999999999999999999999999999999999999988654
No 143
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.63 E-value=4.1e-14 Score=115.48 Aligned_cols=143 Identities=12% Similarity=0.068 Sum_probs=107.1
Q ss_pred CCchhhHHHH-HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHHHHHHHHhhhh
Q 026854 72 SKDNSLYVDV-FITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPL---VFH-QSAVVTTVLLFGVRMCATGTI 146 (232)
Q Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~ 146 (232)
.+..+.+... ....++.+++.+++|+++||+|||+.+.++..+..+..... ... ++.+.+....++..++.+...
T Consensus 255 ~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~ 334 (491)
T PRK11010 255 FDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGT 334 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 8888888876 45568999999999999999999888776665544443322 222 233333334444444444455
Q ss_pred hhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 147 TVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 147 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+..+++..+..|++.+++..++.+....+|..+++.+.|++.+..||...|.+.+++.+++.+.....
T Consensus 335 ~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 335 AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 66678888999999999999999999999999999999999999999888888888877776666544
No 144
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.63 E-value=2.8e-14 Score=111.67 Aligned_cols=197 Identities=13% Similarity=0.036 Sum_probs=146.4
Q ss_pred chhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHH
Q 026854 18 SFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAI 97 (232)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (232)
+.+++.+-...|+++...+...+....++......|.|.+... +..+.+....+...++..+..++...+..+
T Consensus 209 ~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f-------~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~ 281 (412)
T PF01306_consen 209 SLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF-------QSAGQGNQMYGYLWSVQVFLEALMMFFSPW 281 (412)
T ss_dssp -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cccccChhHHhHHHHHHHHHHHHHHHHHHH
Confidence 3444443223345555544444444444444333444443322 001144455777888888999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHH-Hhhhhh
Q 026854 98 IVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVAS-AVGRVG 176 (232)
Q Consensus 98 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g 176 (232)
+.+|+|.|+.++++..++.+=.....+.++++.+.....+.++-.+.......-|+++.+|++..++...+.. ....+|
T Consensus 282 li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 282 LINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG 361 (412)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred HHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998888999999999999999999998864 555799
Q ss_pred hchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 177 GMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 177 ~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
..+.+.+.|.+.|+.|.+..+++.+.+.+...++..+.+++.++.
T Consensus 362 ~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 362 IIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999999999999999999999988888888887777655543
No 145
>PRK10504 putative transporter; Provisional
Probab=99.63 E-value=7.1e-14 Score=113.79 Aligned_cols=148 Identities=10% Similarity=0.008 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-CCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH
Q 026854 35 WVLFFANAFSYYGAVLLTSKLSSG-DSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV 113 (232)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 113 (232)
....++..........+.|.+.+. .+ .+..+.++......++..++.++.+++.||+|||+++..+..
T Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~ 335 (471)
T PRK10504 267 LAGSFAGRIGSGMLPFMTPVFLQIGLG-----------FSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTL 335 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 333344444444455567777653 33 777888888888888888888999999999999999998888
Q ss_pred HHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 114 LACIFLLPLVFH---QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 114 ~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
+..+....+... .+.+......++.|++.+...+.......+..|++.|+++.++.+....+|..+++.+.+.+.+.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 336 GLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776655542 22233334455666777777778888888999999999999999999999999999999999887
Q ss_pred cch
Q 026854 191 CHL 193 (232)
Q Consensus 191 ~g~ 193 (232)
.|+
T Consensus 416 ~g~ 418 (471)
T PRK10504 416 FGQ 418 (471)
T ss_pred hhh
Confidence 654
No 146
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.62 E-value=3.9e-14 Score=115.69 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=121.0
Q ss_pred HHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhH
Q 026854 49 VLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSA 128 (232)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 128 (232)
...++....+.| .+ .+..|......++..++.++.|+++|.+|||..++.+.++..++.+....+++.
T Consensus 64 a~~l~~I~~diG-----------~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~ 131 (599)
T PF06609_consen 64 ASILPYINADIG-----------GS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNM 131 (599)
T ss_pred HHHHHHHHHhcC-----------CC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcH
Confidence 344566666665 33 444677778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 026854 129 VVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 208 (232)
Q Consensus 129 ~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 208 (232)
..+.....+.|++.+... .....++|+.|.+.|..+.++.....-.....+|.+...+..+.+||+.+++..+...++.
T Consensus 132 ~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred HHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 999999999998865544 4566689999999999888777665556666788888777767799999999888776665
Q ss_pred HHHh
Q 026854 209 ASSL 212 (232)
Q Consensus 209 ~~~~ 212 (232)
+..+
T Consensus 211 vl~~ 214 (599)
T PF06609_consen 211 VLIF 214 (599)
T ss_pred HHHH
Confidence 4433
No 147
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.62 E-value=4e-14 Score=112.78 Aligned_cols=142 Identities=10% Similarity=0.082 Sum_probs=115.0
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+....+...++..+...++.+..|++.||+|||+.+.++..+.++........++.+...+..++.+++..........
T Consensus 251 ~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 330 (396)
T TIGR00882 251 QGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFK 330 (396)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456677778888888999999999999999999999988888887776666677777777777777776555556666
Q ss_pred ccccccccchhhhhhHH-HHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhc
Q 026854 152 YAPEIYPTSARTTGAGV-ASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
+..+..|++.++++.+. .+....+|+.++|.+.|++.|..|++..+.+.+++..+..+...+
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888887777 567788999999999999999999999999888888777665543
No 148
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.62 E-value=4.1e-14 Score=112.18 Aligned_cols=165 Identities=12% Similarity=0.022 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH----HHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK----LSMVLMFV 113 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr----~~~~~~~~ 113 (232)
+++..........++|.+.++.+ .+..+.++..+...+...+++++.|+++||+||| +.+.+...
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g-----------~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~ 81 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQG-----------YTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTL 81 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcC-----------CCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHH
Confidence 44444555566677888887776 8999999999999999999999999999999984 33322222
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccch
Q 026854 114 LACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~ 193 (232)
.. ........++.+.+.+.+.+.+++.+...+...++..++ .++|+++.+.....+.+|..++|.+++++.++.||
T Consensus 82 ~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~ 157 (382)
T PRK11128 82 LF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGE 157 (382)
T ss_pred HH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 11 112222246677777788888888777778777776665 45688889999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccc
Q 026854 194 RLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+..+++.++...+..+.. +..||+
T Consensus 158 ~~~f~~~~~~~~~~~~~~-~~~~~~ 181 (382)
T PRK11128 158 QAILWILTAGVASMLLGQ-LLRPTI 181 (382)
T ss_pred hHHHHHHHHHHHHHHHHH-HccCCC
Confidence 998887766554444333 334554
No 149
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.61 E-value=8.6e-15 Score=115.09 Aligned_cols=183 Identities=16% Similarity=0.095 Sum_probs=151.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh-hchH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK-IGRK 105 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr 105 (232)
+.|.++.++...+.--+++|++...+..|+...- .++.+++++++.-....+..-.-...+++||++|| +|+|
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~------~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~ 92 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQL------GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR 92 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhc------cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 4577888889999999999999877777764332 11145778887777777766667888999999999 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhhhhhhhhccccccccc--hhhhhhHHHHHhhhhhhchhH
Q 026854 106 LSMVLMFVLACIFLLPLVFHQ--SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTS--ARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~ 181 (232)
+++..+.+++.++.+.+.... +...+++...+..++.|..-+...+++.|.+|++ .|-.+.++.+...++|+.++|
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 999999999999999998863 5667777777777899999999999999999764 377888899999999999999
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc
Q 026854 182 LVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 215 (232)
Q Consensus 182 ~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 215 (232)
.+.+++.+..||+..|...++-..++.+..+...
T Consensus 173 ~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 173 IITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999998888888777666553
No 150
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.61 E-value=9.3e-14 Score=110.44 Aligned_cols=157 Identities=13% Similarity=-0.063 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHh-hhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 43 FSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSF-AELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
........+.+.+.++.+ .+.++.+........ ..+++.++.|++.||+|+|+.+..+..+..+....
T Consensus 222 ~~~~~~~~~~~~~l~~~G-----------~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~ 290 (390)
T TIGR02718 222 MTAVSGFGLSKLYLVDAG-----------WPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALL 290 (390)
T ss_pred HHHHHHHHHhhHHHHhcC-----------CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 333334445677776665 888888888777654 56677899999999999999988777655333222
Q ss_pred HHh------hhhHHHHHHHHHHHHHHHhhhhhhhhhcccccccc-chhhhhhHHHHHhhhhhhchhHHHHHHHhhccchh
Q 026854 122 LVF------HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPT-SARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLR 194 (232)
Q Consensus 122 ~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~ 194 (232)
... .++.........+.++..+...+.......+..++ +.+++.+++.+...++|..++|.+.|.+.|..|+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~ 370 (390)
T TIGR02718 291 WFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYA 370 (390)
T ss_pred HHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 221 11222223333444445556666666666666665 88999999999999999999999999999998988
Q ss_pred HHHHHHHHHHHHHHHH
Q 026854 195 LAVILFEVVFVLAIAS 210 (232)
Q Consensus 195 ~~~~~~~~~~~~~~~~ 210 (232)
..+...+++.+++.+.
T Consensus 371 ~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 371 GGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7887776666655443
No 151
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.60 E-value=4e-14 Score=109.16 Aligned_cols=181 Identities=17% Similarity=0.163 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
+..-.+..+...-+..+...+...+.. +.+ .+..+..+......+.+++|+++.|++.||+|.|+++.
T Consensus 254 i~~FLiA~~~~~DGv~til~~~~~fg~~~~g-----------ls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 254 LVLFLIARFFYIDGVNTILAMGGVFGAADLG-----------LSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC-----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh
Confidence 333333444433344444445555554 443 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh
Q 026854 110 LMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 189 (232)
++.++..+..+...+......+.++.++.|.+.|+.++...++.+++.|+++-++.+|+++..++.++.++|...+.+.+
T Consensus 323 ~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~ 402 (438)
T COG2270 323 IGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQ 402 (438)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHH
Confidence 99988888777777766666777778889999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcccccccCCC
Q 026854 190 SCHLRLAVILFEVVFVLAIASSLLFPFETKGRE 222 (232)
Q Consensus 190 ~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 222 (232)
.+|....-....++.+...+..+...|+.++++
T Consensus 403 iTg~~r~g~~~i~vll~iGl~~L~~v~~~~~~~ 435 (438)
T COG2270 403 ITGSSRAGVLSIIVLLLIGLLLLLRVKVPGRRE 435 (438)
T ss_pred HhcchhhHHHHHHHHHHhhHhhEEeecCCCCcc
Confidence 887644433333333334444455556554443
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.60 E-value=9.2e-14 Score=113.32 Aligned_cols=155 Identities=14% Similarity=0.046 Sum_probs=132.3
Q ss_pred HHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh
Q 026854 48 AVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQS 127 (232)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~ 127 (232)
....+|.+.++.. +.+....++..+..+++.++|+++.+++.+|+++++.+..+.+..+++.+.+.+.++
T Consensus 237 ~~aLlPl~a~~~l----------~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~ 306 (524)
T PF05977_consen 237 VWALLPLFARDVL----------GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPS 306 (524)
T ss_pred HHHhhhHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchH
Confidence 3344677764332 377788899999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHH
Q 026854 128 AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 207 (232)
Q Consensus 128 ~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~ 207 (232)
.+...+..++.|++.........+...+..|++.||++++++.+....+..+|..+.|.+.+..|....+.+.++..+++
T Consensus 307 ~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 307 FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 88888888888988888888888999999999999999999999999999999999999999999988887776665555
Q ss_pred HHHHh
Q 026854 208 IASSL 212 (232)
Q Consensus 208 ~~~~~ 212 (232)
.++..
T Consensus 387 ~~~~~ 391 (524)
T PF05977_consen 387 ALIAL 391 (524)
T ss_pred HHHHH
Confidence 55443
No 153
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.59 E-value=1.1e-13 Score=112.46 Aligned_cols=175 Identities=13% Similarity=0.157 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH-
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLS- 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~- 107 (232)
+.++...+..++.....+....|.|.+.++.. +.+..+.++...+..++..++.++.|+++||+++|+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~ 330 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVL----------RVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTL 330 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45666677777888888888889999985532 3788888898889999999999999999999875421
Q ss_pred -------HHHHHHHH--HHHHHHHHh-hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhh
Q 026854 108 -------MVLMFVLA--CIFLLPLVF-HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGG 177 (232)
Q Consensus 108 -------~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 177 (232)
+..+.... .+..+.... ..+.....+...+.+.+.+...+.......|..|+ .+|.+.++.+..+.+++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~ 409 (465)
T TIGR00894 331 SLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGG 409 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHH
Confidence 11111111 111111111 22333333334444444444445555566677765 89999999999999999
Q ss_pred chhHHHHHHHhhcc---chhHHHHHHHHHHHHHHHHHhcc
Q 026854 178 MVCPLVAVGLVTSC---HLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 178 ~~~~~i~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
.++|.+.|++.+.. +|...+.+.++..+++.++....
T Consensus 410 ~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 410 LIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 99999999887753 36667777777777766555443
No 154
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.59 E-value=9.7e-14 Score=108.95 Aligned_cols=150 Identities=12% Similarity=0.085 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh-chHHHHHH
Q 026854 32 VLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI-GRKLSMVL 110 (232)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~ 110 (232)
+...+...+....++....|.|.+.++.+ .+..+.+...+...++.++++++.|++.||+ +||+.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~g-----------~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~ 268 (355)
T TIGR00896 200 WQVTVFFGLQSGLYYSLIGWLPAILISHG-----------ASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAV 268 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Confidence 33334444555666777788898887655 7888888999999999999999999999999 56777777
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcccccc-ccchhhhhhHHHHHhhhhhhchhHHHHHHHhh
Q 026854 111 MFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIY-PTSARTTGAGVASAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 189 (232)
+..+..++...+.+..+.... ....+.|++.+...+...+...+.. +++.++...++.+..+.++..++|.+.|++.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 269 LAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred HHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777766655554332222 2345677788777777766665544 46777899999999999999999999999999
Q ss_pred ccch
Q 026854 190 SCHL 193 (232)
Q Consensus 190 ~~g~ 193 (232)
+.|.
T Consensus 348 ~~g~ 351 (355)
T TIGR00896 348 ISGN 351 (355)
T ss_pred Hhcc
Confidence 8764
No 155
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.59 E-value=3.8e-13 Score=103.50 Aligned_cols=164 Identities=15% Similarity=0.111 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+..+...+..++....-.+...|.+.|.++.. ..+.+..+.+...+....+..+|.++.+++.||+|+|+.+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~--------~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l 211 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPH--------ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL 211 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 44555555566655566677888999985421 1137888889999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 109 VLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
.++..+..+..++....++... .....+.|++.+..+|...+...+.+|++ .+++.++. ..+.+|+.+.|.+.|.+.
T Consensus 212 ~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 212 AFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 8887777776655544333322 33455778888899999999998988765 45666664 567799999999999999
Q ss_pred hccchhHHHHHHHHH
Q 026854 189 TSCHLRLAVILFEVV 203 (232)
Q Consensus 189 ~~~g~~~~~~~~~~~ 203 (232)
|..|.+.++++...+
T Consensus 289 d~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 289 DCLGIQLAFALPVPC 303 (310)
T ss_pred HhccchHHHHHHHHH
Confidence 988887777644333
No 156
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.57 E-value=9.3e-14 Score=110.82 Aligned_cols=143 Identities=18% Similarity=0.155 Sum_probs=113.7
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhhhhcc
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTITVATIYA 153 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 153 (232)
.....++..++.++|++..++++||+|||..+.++.++..++...+.. .++...+.+.+++.|+..+........++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 345667788999999999999999999999999999888888877776 57788899999999999999999999999
Q ss_pred ccccccchhhhhhHHHHHhhhhhhchhHHHH-HHHhh-ccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 154 PEIYPTSARTTGAGVASAVGRVGGMVCPLVA-VGLVT-SCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 154 ~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~-~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.|..|.+.||....+......+|..++..++ ..+.. ...|+..+....+..++..+ ...+.||+++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk 209 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPK 209 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcc
Confidence 9999999999988888888888888885554 33332 33466555555555555544 4455588854
No 157
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.57 E-value=4.3e-13 Score=107.20 Aligned_cols=173 Identities=8% Similarity=-0.155 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
++...+.........+....+.|.+..+.. +.+..+.+.......++..++.++.|+++||+|+|+.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~ 286 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGE----------QLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRM 286 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 333333333333334444455676653321 2666777777777777888999999999999999999888
Q ss_pred HHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 111 MFVLACIFLLPLVFH-----QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 111 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+..+..++....... .+.++..+..++.+++.+...+......... ++++|++..+..+....++..+++.+.+
T Consensus 287 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 287 GLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776666655442 2344455566667777766655555544333 4488999999999999999999999999
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 186 GLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 186 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
++.+..++....+...+...+.......+
T Consensus 366 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 366 HAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred hcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99888776654444444444443444333
No 158
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.56 E-value=7.2e-14 Score=110.17 Aligned_cols=158 Identities=16% Similarity=0.174 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc-hHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIG-RKLS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~ 107 (232)
+.++...+..+......+....+.|.+.++.. +.+..+.+.......++.+++.++.|++.||.+ ||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 285 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEK----------GFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG 285 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch
Confidence 33444555555556666667778888875432 377788888888999999999999999999864 3332
Q ss_pred HH-HHH-HHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHH
Q 026854 108 MV-LMF-VLACIFLLPLVF--HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 108 ~~-~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 183 (232)
.. ... ....++...... ..+.....+..++.|.+..+..+....+..|.+|++.|+++.|+.+....+|+.++|.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 365 (379)
T TIGR00881 286 PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLP 365 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhh
Confidence 22 222 112222222222 23334444555556655555566667788999999999999999999999999999999
Q ss_pred HHHHhhccchhHH
Q 026854 184 AVGLVTSCHLRLA 196 (232)
Q Consensus 184 ~~~l~~~~g~~~~ 196 (232)
.|.+.+..||+..
T Consensus 366 ~g~l~~~~g~~~~ 378 (379)
T TIGR00881 366 LGYLADGFGWAGA 378 (379)
T ss_pred HHHHHHhhccccc
Confidence 9999999887643
No 159
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.55 E-value=1.4e-12 Score=103.89 Aligned_cols=161 Identities=11% Similarity=0.045 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHH-HHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLT-SKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLAC 116 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 116 (232)
.++.....+....+. |.+.++.+ .+..+.+......+++.+++.++.+++.||.+|+...........
T Consensus 225 ~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~ 293 (394)
T PRK10213 225 IFMSFAGQFAFFTYIRPVYMNLAG-----------FGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-----------CChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 333333444444444 66665554 777788888888899999999999999999654443433333333
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHH
Q 026854 117 IFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLA 196 (232)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~ 196 (232)
....+....++.+......++.|++.+...+...+++.+..| +++++..++.....++|..+||.++|++.|..|....
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~ 372 (394)
T PRK10213 294 SALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSP 372 (394)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhH
Confidence 333433445566666667777888887777878878888887 4466777777788889999999999999999888777
Q ss_pred HHHHHHHHHHHHHH
Q 026854 197 VILFEVVFVLAIAS 210 (232)
Q Consensus 197 ~~~~~~~~~~~~~~ 210 (232)
+...+.+..+..+.
T Consensus 373 ~~~~~~~~~~~~~~ 386 (394)
T PRK10213 373 LMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666555444433
No 160
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.55 E-value=2e-13 Score=109.98 Aligned_cols=149 Identities=17% Similarity=0.107 Sum_probs=133.5
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
....+.+...+++.++.+++.++++.+.||++-.+.+....+...+..++....+|.+.+.+.+++.|++.++.+|....
T Consensus 78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~ 157 (495)
T KOG2533|consen 78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVA 157 (495)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHH
Confidence 66778889999999999999999999999999777777777777776666666889999999999999999999999999
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh------hccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV------TSCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
+++.++.+++|+..+|+.+....+|+++|+.+...+. ...||++.|++-+++.++.+++.++++|+.+.
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999999999999998763 34589999999999999999999999887654
No 161
>PRK10054 putative transporter; Provisional
Probab=99.54 E-value=4e-13 Score=107.00 Aligned_cols=142 Identities=13% Similarity=0.041 Sum_probs=109.8
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH-QSAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
.+....+.......+.........|++.||.++|+.+..+..+..+........ ++.+...+...+.+++.+...|...
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~ 320 (395)
T PRK10054 241 FAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY 320 (395)
T ss_pred hHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 455556666777767777778899999999999999988887777777666553 4555555666777777777777888
Q ss_pred hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 151 IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 151 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
..+.+..|++.|++..+..+ ..++|..++|.++|.+.|+.|....+++.+....+..+....-
T Consensus 321 ~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (395)
T PRK10054 321 MLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKG 383 (395)
T ss_pred HHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999988654 6679999999999999999988878877766666666555533
No 162
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.54 E-value=1.8e-13 Score=107.53 Aligned_cols=145 Identities=12% Similarity=0.132 Sum_probs=106.8
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHH-hhhhhHHHHHHH
Q 026854 19 FFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITS-FAELPGLILSAI 97 (232)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~ 97 (232)
++++++++..+..+...+..+.....++....+.|.+.++.+ .+..+.+......+ ++.+++.+++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------~~~~~~g~~~~~~~~~~~~~g~~~~g~ 267 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMG-----------FSKEEIALVAKINGLLGAILGGLIGGI 267 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344443333233555555555566666777778888886654 77788777776555 678899999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhh
Q 026854 98 IVDKIGRKLSMVLMFVLACIFLLPLVFH-----------QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGA 166 (232)
Q Consensus 98 l~dr~grr~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~ 166 (232)
+.||+|||+.+..+.++..+......+. ++.+......++.+++.+...+...++..|.+|+++||+.+
T Consensus 268 l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 347 (356)
T TIGR00901 268 IMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQM 347 (356)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHH
Confidence 9999999999888888777765544432 23455556667778888889999999999999999999999
Q ss_pred HHHHHhhh
Q 026854 167 GVASAVGR 174 (232)
Q Consensus 167 ~~~~~~~~ 174 (232)
|+.+...+
T Consensus 348 g~~~~~~~ 355 (356)
T TIGR00901 348 ALLSSLSA 355 (356)
T ss_pred HHHHHHHh
Confidence 99887664
No 163
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.53 E-value=6.3e-13 Score=106.00 Aligned_cols=152 Identities=9% Similarity=0.062 Sum_probs=107.3
Q ss_pred HHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHHHHhhh
Q 026854 48 AVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVD-KIGRKLSMVLMFVLACIFLLPLVFHQ 126 (232)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~~~ 126 (232)
...+.|.+.++.+ .++.+.+...+...+....+....+++.| |++.++.+..+..+.+++...+...+
T Consensus 227 ~~~~~p~~~~~~~-----------~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 295 (400)
T PRK11646 227 VMLMLPIMVNDIA-----------GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS 295 (400)
T ss_pred HHHhhhhhHHhhc-----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh
Confidence 4456788876655 45566677766666666655555566665 56766666777777777766666666
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc----hhHHHHHHHH
Q 026854 127 SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH----LRLAVILFEV 202 (232)
Q Consensus 127 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g----~~~~~~~~~~ 202 (232)
+.+...+...+.+.+.+...+...+++.|..|+++|+++.|+.+....+|..++|.+.|++.|+.+ ....+.....
T Consensus 296 ~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~ 375 (400)
T PRK11646 296 NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGI 375 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHH
Confidence 665555555666666666778888999999999999999999999999999999999999998753 2333444444
Q ss_pred HHHHHHHH
Q 026854 203 VFVLAIAS 210 (232)
Q Consensus 203 ~~~~~~~~ 210 (232)
..++..+.
T Consensus 376 ~~~~~~~~ 383 (400)
T PRK11646 376 IGLITLLA 383 (400)
T ss_pred HHHHHHHH
Confidence 44444433
No 164
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.53 E-value=1.2e-12 Score=104.51 Aligned_cols=139 Identities=13% Similarity=0.096 Sum_probs=96.5
Q ss_pred CCchhhHHHHHHHH-hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH----HHHHHHH
Q 026854 72 SKDNSLYVDVFITS-FAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPL---VFH-QSAVVTTVLL----FGVRMCA 142 (232)
Q Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~----~~~g~~~ 142 (232)
.+..+.++.....+ ++.+++.+++|++.||+|||+.+..+..+..+..+.. ... ++.+...... +..++..
T Consensus 242 ~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 321 (402)
T PRK11902 242 FSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGT 321 (402)
T ss_pred CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 77777777765544 5688999999999999999998877776655544333 222 3334443333 2344555
Q ss_pred hhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 143 TGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 143 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+...+....++.+.+|.+++ ++......++...++.++|.+.|..|+...|.+.+.+.+++.++.+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 322 AAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777888888886654 444555566776667789999999999988888888877776655444
No 165
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.53 E-value=1.2e-12 Score=104.16 Aligned_cols=125 Identities=14% Similarity=0.035 Sum_probs=83.1
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+..+.+.......++.+++.++.+++.||+|||+.+..+..+..++...+...++.........+.+.+.+...+. .
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~ 313 (392)
T PRK10473 236 FSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV--A 313 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--H
Confidence 67777788888889999999999999999999999999988888777777666544443333333333333222222 2
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHH
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFE 201 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~ 201 (232)
...+..|.++|+ +.......++..+++.+.+++.+..|+.......+
T Consensus 314 ~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~ 360 (392)
T PRK10473 314 MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIG 360 (392)
T ss_pred HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 334455555443 44445556777788888888888777654343333
No 166
>PRK11043 putative transporter; Provisional
Probab=99.53 E-value=2.3e-12 Score=102.86 Aligned_cols=141 Identities=12% Similarity=0.115 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 42 AFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
...++....+.|.+.++.+ .+..+.++......++..++.++.+++.||+|+|+..........++...
T Consensus 216 ~~~~~~~~~~~p~~~~~~g-----------~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~ 284 (401)
T PRK11043 216 SAAFFAWLTGSPFILEQMG-----------YSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIA 284 (401)
T ss_pred HHHHHHHHHHhHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 3444555566787776554 77778887777778888999999999999999988765555444443332
Q ss_pred HHh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchh
Q 026854 122 LVF-----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLR 194 (232)
Q Consensus 122 ~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~ 194 (232)
+.. .++.+...+...+.+++.+...+.......|..| ++|+++.|+.+.....++..++.+.+.+.+.....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 285 IWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhH
Confidence 221 2333344444556677777777877777777776 57999999999998888889999999887754333
No 167
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.53 E-value=1.1e-16 Score=129.58 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=121.0
Q ss_pred chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 74 DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ---SAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
.....+..+...++..+|+++.|+++||+|||+.++++..+..++.++..+++ +.+.+.+.+++.|++.|...+...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34567888899999999999999999999999999999999999999999988 889999999999999999999999
Q ss_pred hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc---chhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 151 IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC---HLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 151 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.++.|..|++.|+...++.+....+|..++..+.....+.. +|+..+.+..+..++..+ ...+.||++
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP 195 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESP 195 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 99999999999999999999888888888877765443333 377666665555554443 445668873
No 168
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.52 E-value=3.9e-13 Score=108.38 Aligned_cols=169 Identities=11% Similarity=0.054 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh----hchH-HHHHHHHH
Q 026854 40 ANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK----IGRK-LSMVLMFV 113 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr-~~~~~~~~ 113 (232)
...........+++.+.. +.+ .+....+...++..+...+..++.|+++|| +||| +.++.+..
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g-----------~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~ 78 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLG-----------LSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAI 78 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-----------CCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHH
Confidence 334444445555555554 334 899999999999999999999999999998 6774 45667777
Q ss_pred HHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhhhhhhhhcccccc-ccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 114 LACIFLLPLVFHQS------AVVTTVLLFGVRMCATGTITVATIYAPEIY-PTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 114 ~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
..+++.+.+...++ .....+..++.+.+.+.......++.+|+. ++++|++..++.+....+|+.+++.+.+.
T Consensus 79 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~ 158 (437)
T TIGR00792 79 PFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLP 158 (437)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766655332 234444555666666666667788889987 57889999999888888888777776655
Q ss_pred Hhh-------ccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 187 LVT-------SCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 187 l~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.. ..+|+..+.+.+++..+..+..++..||++
T Consensus 159 l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 159 LVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 543 347888888888887777776666667764
No 169
>PRK09848 glucuronide transporter; Provisional
Probab=99.52 E-value=5.6e-13 Score=107.91 Aligned_cols=154 Identities=12% Similarity=0.006 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
.+....+..++............|.+.++.. +.+.....+......++.+++.++.+++.||+|+|+.+.
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~ 298 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVL----------NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFL 298 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeec----------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 3344444444444555555555666665432 244444344344445677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccc-------hhhhhhHHHHHhhhhhhchh
Q 026854 110 LMFVLACIFLLPLVFH--QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTS-------ARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~~~~g~~~~ 180 (232)
++..+..++.+.+.+. .+.+...+..++.+++.+...+..+++.+|..|.+ .+|...|+.+....+|..++
T Consensus 299 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 299 IGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 9988887777666553 34455555566778888888888899988888754 45888999999999999999
Q ss_pred HHHHHHHhhccch
Q 026854 181 PLVAVGLVTSCHL 193 (232)
Q Consensus 181 ~~i~~~l~~~~g~ 193 (232)
+.+.+.+.+..|+
T Consensus 379 ~~i~g~~l~~~G~ 391 (448)
T PRK09848 379 GSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHcCC
Confidence 9999988876554
No 170
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.51 E-value=1.8e-12 Score=102.88 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=97.1
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF-HQSAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
.+..+.+.......++.+++.++.|++.||+|+|+.+..+..+..++.+.... .++.+...+..++.+.+..+..+...
T Consensus 232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 78888889999999999999999999999999999988888777776655543 33444444444444444333333223
Q ss_pred -hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHhcc
Q 026854 151 -IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 151 -~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
....+..|++.++.+ ..+....+|..++|.+.|++.|. .++...+.+.++...+.......+
T Consensus 312 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 312 ILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 334455555555544 34667789999999999999996 467777777666655554444443
No 171
>PRK09669 putative symporter YagG; Provisional
Probab=99.51 E-value=1.7e-12 Score=105.01 Aligned_cols=116 Identities=12% Similarity=0.012 Sum_probs=88.5
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF--HQSAVVTTVLLFGVRMCATGTITVATIYAPE 155 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e 155 (232)
........+..+++.+++++++||+|+|+.+..+..+..+....... .++.+...+..++.+++.+...+..+++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445556778888999999999999999998887666544433332 3455556666778888888888999999999
Q ss_pred cccc-------chhhhhhHHHHHhhhhhhchhHHHHHHHhhccch
Q 026854 156 IYPT-------SARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 156 ~~p~-------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~ 193 (232)
..+. +..|...|.......+|..+++.+.|.+.+..|+
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8862 3345667888888899999999999999887665
No 172
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.51 E-value=2.8e-12 Score=98.51 Aligned_cols=180 Identities=19% Similarity=0.121 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
-....+...++...+.........|.+.+.+. .+..++++.......+..+.++..|++.+|+|+|+-+
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~-----------ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi 81 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFD-----------LTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI 81 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhC-----------ccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH
Confidence 44455555666666666666777888886665 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 109 VLMFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+.+..+++++..+..- ..++..+++..++.+.+.+...+....+++.+.|++..+.-+.+...+..+|+.++|.+++
T Consensus 82 ~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 82 VLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 9999999999998864 4566677777888888999999999999999999988888899999999999999999999
Q ss_pred HHhhc-------------------cchhHHHHHHHHHHHHHHHHHhc-cccccc
Q 026854 186 GLVTS-------------------CHLRLAVILFEVVFVLAIASSLL-FPFETK 219 (232)
Q Consensus 186 ~l~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~-~~~e~~ 219 (232)
++..+ ..++.++...+....+..+.... -.|+.+
T Consensus 162 ~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~ 215 (422)
T COG0738 162 SLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQ 215 (422)
T ss_pred HHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCC
Confidence 88873 12455666666655554444333 234443
No 173
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.50 E-value=3.4e-13 Score=104.91 Aligned_cols=193 Identities=15% Similarity=0.083 Sum_probs=131.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
+++.+.+.+.....+.-....+.+..-.|.+.....+..... -+.+....+.......++.++|+++.|++.||+||
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~---g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESG---GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCC---CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 334444444444555555666666666665543332111111 23566677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---h----hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhh
Q 026854 105 KLSMVLMFVLACIFLLPLVFH---Q----SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGG 177 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 177 (232)
|+++-..++++.++.+..... + -.+++...+++.|++.|+-+|+..+..+|....+.||.-.+........|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999998866651 1 135677889999999999999999999999999999998888776666555
Q ss_pred chhHHHHHHHh---hc-cc-----------hhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 178 MVCPLVAVGLV---TS-CH-----------LRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 178 ~~~~~i~~~l~---~~-~g-----------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
..|..+.-.+. ++ .+ |+ .-+..+.+..+..+.....+|||++-
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWR-l~~glg~vpa~~~ly~Rl~M~Et~~Y 251 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWR-IIFGLGAVPALLVLYFRLKMPETARY 251 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHH-HHHHHHHHHHHHHHHhhhcCCcchhH
Confidence 54444433322 21 11 33 33344445555555556667888653
No 174
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.50 E-value=1.7e-13 Score=111.26 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc--hHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIG--RKL 106 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~ 106 (232)
+.++...+...+..+.++....++|.+.++.+ .+..+.....++.++..+++.++.|+++|+.. ++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g-----------~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~ 366 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLG-----------LSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV 366 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----------CChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH
Confidence 55666667777788888889999999998776 89999999999999999999999999999987 556
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 107 SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
...++.+..+++...+.+.++++.+.....+.|++.+...+.....+.|+.+.+.-..+.|+...+..++..++|.+.|+
T Consensus 367 ~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~ 446 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccccee
Confidence 67777788888887777788888899999999999999988888999999999999999999999999999999999999
Q ss_pred Hhhccc-hhHHHHHHHHHHHHHHHHHhcc
Q 026854 187 LVTSCH-LRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 187 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+.|.+| +...|...+...+++....++.
T Consensus 447 ~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 447 LYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred eeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 999888 6666666666666666554443
No 175
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.50 E-value=6.6e-12 Score=103.57 Aligned_cols=196 Identities=28% Similarity=0.435 Sum_probs=143.0
Q ss_pred cchhhhcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHH
Q 026854 17 SSFFTLFSRK-LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILS 95 (232)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (232)
..+.++++.+ .++.++...+.++.....+|+.......+. .+........+.....+....
T Consensus 309 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg------------------~~~~~~~~~~~~~~~p~~~~~ 370 (521)
T KOG0255|consen 309 ISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLG------------------GNIYLNFTLSGLVELPAYFRN 370 (521)
T ss_pred CchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcC------------------chHHHHHHHHHHHHhhHHHHH
Confidence 3456666543 566777777777777777777765554332 333555555566888888888
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHh
Q 026854 96 AIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAV---VTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAV 172 (232)
Q Consensus 96 g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 172 (232)
+...|++|||.....+..+..++.+...+..+.. ...+...+..++.+..+...+.+.+|++|+..|..+.+.....
T Consensus 371 ~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~ 450 (521)
T KOG0255|consen 371 GLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAA 450 (521)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 9999999999999999999999988888743322 3455555566666666777799999999999999999999999
Q ss_pred hhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCchhhHHhhh
Q 026854 173 GRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGRELKDAVDAIE 231 (232)
Q Consensus 173 ~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 231 (232)
..++++++|.+...... ......+.+++....+.+++...++|||+++++.+..++.|
T Consensus 451 ~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 451 ARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 99999999998865544 22222333356666777777767889999988876655544
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.50 E-value=4e-12 Score=101.11 Aligned_cols=177 Identities=16% Similarity=0.051 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHH--HHHHhhhhhHHHHH-HHHHhhhchHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDV--FITSFAELPGLILS-AIIVDKIGRKLS 107 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~grr~~ 107 (232)
...+...++.+...+.......|.+.++.+ .+.++.+... ....+..++.+++. ++..||+|||+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g-----------~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~ 71 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDG-----------APLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRS 71 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchh
Confidence 445666778888887888889999998887 8889988863 55677777777777 457899998888
Q ss_pred HHHHHHHH-HHHHHHHH-h--hhh-HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHH
Q 026854 108 MVLMFVLA-CIFLLPLV-F--HQS-AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 108 ~~~~~~~~-~~~~~~~~-~--~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
.++...+. ......+. . ..+ ..+.........++.....+....+..|..+++.++...+.......+|..+++.
T Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~ 151 (390)
T TIGR02718 72 WVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGA 151 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 65555332 22222222 1 222 2233333444445555666777788888888888888888887777899999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
..+++.+..||+..|++.+++..+..+..++..|++
T Consensus 152 ~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 152 GTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999888777666655554443
No 177
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.49 E-value=1.7e-12 Score=105.98 Aligned_cols=151 Identities=12% Similarity=0.086 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
+....+..+.....++....+.|.+.++.. +.+..+.++......++.+++.++.|++.||+|||+.+.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~ 326 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVL----------GYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTI 326 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHH
Confidence 333444555556666677778888886532 3788888999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 111 MFVLACIFLLPLVF----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 111 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
+..+..++...+.+ ..+.+......++.|++.+...+.......+..|+++|+++.++.+....+|+.+++.+.+.
T Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 327 GLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776662 22344455556777887777776666777788899999999999999999999999999998
Q ss_pred Hhhcc
Q 026854 187 LVTSC 191 (232)
Q Consensus 187 l~~~~ 191 (232)
+.++.
T Consensus 407 ~~~~~ 411 (485)
T TIGR00711 407 ILTNR 411 (485)
T ss_pred HHHHH
Confidence 88753
No 178
>PRK10133 L-fucose transporter; Provisional
Probab=99.49 E-value=6.5e-12 Score=101.28 Aligned_cols=160 Identities=9% Similarity=-0.015 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHhh-cCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLS-SGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLAC 116 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 116 (232)
.++.....+....|.+.+. ++.. +.+..+.+.......++.++++++.+++.||+|||+++..+..+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~~~~----------g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~ 336 (438)
T PRK10133 267 QFCYVGAQTACWSYLIRYAVEEIP----------GMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAM 336 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 3444444444555666664 3221 3888999999999999999999999999999999999888877766
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc-hhH
Q 026854 117 IFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH-LRL 195 (232)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g-~~~ 195 (232)
+......+.++. .......+.+++.+..+|..++...|.+|++ .+++.++... ..+|+.++|.+.|.+.|..| .+.
T Consensus 337 ~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~ 413 (438)
T PRK10133 337 ALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPT 413 (438)
T ss_pred HHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHH
Confidence 655555444433 2344566788899999999999999998764 5677777753 45788899999999999887 666
Q ss_pred HHHHHHHHHHHHHHH
Q 026854 196 AVILFEVVFVLAIAS 210 (232)
Q Consensus 196 ~~~~~~~~~~~~~~~ 210 (232)
.+++.....+.....
T Consensus 414 ~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 414 AELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHHHHHH
Confidence 776655555444443
No 179
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.49 E-value=9.9e-13 Score=117.74 Aligned_cols=157 Identities=11% Similarity=-0.070 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCch-hhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 026854 40 ANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDN-SLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIF 118 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 118 (232)
+.....+....+.|.+..+.. +.+.. ..++..+...++.+++.++.|+++||+++|+.+.++.++.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 243 YFWFISQLAQANFPAYAKEVL----------GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHhhHHHHHHHh----------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHH
Confidence 333344444555666664322 36667 7888888899999999999999999999998888888888877
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc-cchhHHH
Q 026854 119 LLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS-CHLRLAV 197 (232)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-~g~~~~~ 197 (232)
.+.+....+.+...+..++.|++.+...+...+++.+..|++.||+++|+.+.+..+|..+++.+++.+... .++...+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~ 392 (1146)
T PRK08633 313 LFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLF 392 (1146)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 777777667777777778888888888888899999999999999999999999999998888777765442 2333344
Q ss_pred HHHHHHHHH
Q 026854 198 ILFEVVFVL 206 (232)
Q Consensus 198 ~~~~~~~~~ 206 (232)
.+.+.+.++
T Consensus 393 ~~~~~~~~~ 401 (1146)
T PRK08633 393 YLIALVTLI 401 (1146)
T ss_pred HHHHHHHHH
Confidence 444444333
No 180
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.48 E-value=4.2e-12 Score=100.61 Aligned_cols=143 Identities=13% Similarity=0.076 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLAC 116 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 116 (232)
.........+....+.|.+.++.. +.+..+.+.......++.+++.++.|++.||+|||+.+..+..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 283 (385)
T TIGR00710 214 IYGASFGGFFAFFSGAPFVYIDIM----------GVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFA 283 (385)
T ss_pred HHHHHHHHHHHHHHcChHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 333344444555566676664221 3777888888888899999999999999999999999888877776
Q ss_pred HHHHHHHhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 117 IFLLPLVFH-----QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 117 ~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
++...+... .+.........+.+++.+...+.......|..| +.|+++.++.+.....++.+.+.+.+.+.+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 284 VSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 666555442 122333444566677777777888888888887 5689999999888876555555555544443
No 181
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.48 E-value=1.1e-12 Score=106.68 Aligned_cols=167 Identities=16% Similarity=0.049 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
........+.+..+.+.+.++++ .+..+..+..++......+..++.+.+.||+|.|.+.+.+.++..+
T Consensus 55 ~~~~~g~~~~~Gv~~~~~~~~f~-----------~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 55 NLSTDGLINSFGLLFEELMDYFG-----------SSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred HHhhhcchheehhhHHHHHHHhC-----------CCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 33334444555566777776665 6677789999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHH-HHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHH
Q 026854 118 FLLPLVFHQSAVVTTVLL-FGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLA 196 (232)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~ 196 (232)
+.++..++++.+.+++.. ++.|++.+..+....+.+...| ++.|+.+.|+......+|.++-|.+..++.+..||+..
T Consensus 124 g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~ 202 (509)
T KOG2504|consen 124 GLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGA 202 (509)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHH
Confidence 999999999987766554 6677788777777777788777 56699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccc
Q 026854 197 VILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~ 216 (232)
+++.+.+.+-..+......|
T Consensus 203 ~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 203 LLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999988777777776666
No 182
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.48 E-value=2.1e-12 Score=94.90 Aligned_cols=154 Identities=11% Similarity=-0.023 Sum_probs=112.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
+.+.++.+.+..++.....+.+...-|.+.++.. +.+..+++-..+.....+.+.+++.|.++||+|++.
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rf----------GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRF----------GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL 331 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh----------CCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee
Confidence 4455666666666666665555555666664433 488888888888888888999999999999999998
Q ss_pred HHHHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 107 SMVLMFVLACI-FLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
..+.+..+..+ +-..+.+ +.+.-+....+.|..........|..++.+.|.++-|++.|+.+.+.++|-.+.|.+.|
T Consensus 332 ~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred hhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 77766554433 3333333 12222334555666555555557778888899999999999999999999999999999
Q ss_pred HHhhccc
Q 026854 186 GLVTSCH 192 (232)
Q Consensus 186 ~l~~~~g 192 (232)
.+.|+-|
T Consensus 410 ~i~d~~g 416 (459)
T KOG4686|consen 410 FIADGDG 416 (459)
T ss_pred eeecCCC
Confidence 9998766
No 183
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.48 E-value=3.6e-12 Score=102.61 Aligned_cols=119 Identities=14% Similarity=0.117 Sum_probs=102.6
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhhhhhhhhc
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ--SAVVTTVLLFGVRMCATGTITVATIY 152 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~ 152 (232)
...+.......++.+++.+++++++||+|+|+.+..+..+.+++.+.+.+.+ +.+..++...+.|++.+..++..+++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 4456667778889999999999999999999999999999999888887764 88888889999999999999999999
Q ss_pred ccccccc-------chhhhhhHHHHHhhhhhhchhHHHHHHHhhccch
Q 026854 153 APEIYPT-------SARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 153 ~~e~~p~-------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~ 193 (232)
.+|..+. +..|...|+......++..+++.+.+.+.+..|+
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 9999873 3457888888888899999999999988876553
No 184
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.48 E-value=3.4e-12 Score=104.00 Aligned_cols=154 Identities=10% Similarity=-0.000 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
|.+.......+......+....+.+.+.+... .+....+.......++.+++.++.++++||+|+|+.+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~-----------~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~ 299 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVI-----------GDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW 299 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEEC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 44444445555555555555555555554332 2334445566666788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccc-------cchhhhhhHHHHHhhhhh
Q 026854 109 VLMFVLACIFLLPLVF-----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYP-------TSARTTGAGVASAVGRVG 176 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g 176 (232)
.++..+..++.+.... ..+.+...+..++.+++.+...+..+++++|..| .+..|...|.......++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~ 379 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGG 379 (473)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHH
Confidence 8888766655444332 2344555566677778888888889999999965 233455777888888999
Q ss_pred hchhHHHHHHHhhccch
Q 026854 177 GMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 177 ~~~~~~i~~~l~~~~g~ 193 (232)
..+++.+.|++.+..|+
T Consensus 380 ~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 380 SAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999876654
No 185
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.47 E-value=7.2e-12 Score=99.10 Aligned_cols=113 Identities=13% Similarity=0.118 Sum_probs=76.9
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF----HQSAVVTTVLLFGVRMCATGTIT 147 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~ 147 (232)
.+..+.+.......++.+++.++.|++.||+|||+.+..+.....+..+.... ..+.+...+...+.+.+.+...+
T Consensus 227 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T PRK11102 227 VSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISS 306 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 77888899999999999999999999999999999988887665444333222 12233333333333333334444
Q ss_pred hhhhccccccccchhhhhhHHHHHhh-hhhhchhHHHHH
Q 026854 148 VATIYAPEIYPTSARTTGAGVASAVG-RVGGMVCPLVAV 185 (232)
Q Consensus 148 ~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~i~~ 185 (232)
.......|..| +.|+++.++.+... .+|..+++.+.+
T Consensus 307 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 307 NAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55556677776 78899999887765 466666666554
No 186
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.46 E-value=6.5e-12 Score=95.28 Aligned_cols=180 Identities=13% Similarity=0.109 Sum_probs=136.5
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHH
Q 026854 20 FTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIV 99 (232)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 99 (232)
..++++ +..+.+.+.+-.+...+|....|+|.+..|.| .|..+.+...+...+.+++.++....+.
T Consensus 202 ~~vw~~---~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G-----------~sa~~aG~llsl~~l~~~~~~ll~P~la 267 (395)
T COG2807 202 RKVWRS---PLAWQVTLFMGLQSLLYYIVIGWLPAILIDRG-----------LSAAEAGSLLSLMQLAQLPTALLIPLLA 267 (395)
T ss_pred cccccC---chhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----------CCHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 345543 33445555566678899999999999999988 9999999999999999999999999999
Q ss_pred hhh-chHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccc-cchhhhhhHHHHHhhhhhh
Q 026854 100 DKI-GRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYP-TSARTTGAGVASAVGRVGG 177 (232)
Q Consensus 100 dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~ 177 (232)
+|. ++|+..+....++.++...+.+.+....... .++.|++.++.++.....+.+-.+ +++-++-.++.+.++++-+
T Consensus 268 ~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllA 346 (395)
T COG2807 268 RRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLA 346 (395)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHH
Confidence 976 4777777777778777777766443322222 478888989999999888877764 4556778889999999999
Q ss_pred chhHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHhcc
Q 026854 178 MVCPLVAVGLVTSCHLRLA-VILFEVVFVLAIASSLLF 214 (232)
Q Consensus 178 ~~~~~i~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 214 (232)
.++|.+.|++-|.+|.+.. ........++..+..+..
T Consensus 347 a~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 347 AFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred hhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999875544 444444444444444433
No 187
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.46 E-value=2.6e-12 Score=94.59 Aligned_cols=155 Identities=12% Similarity=0.078 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
........|.+..|.|.+.+..+ .++++.........++..+ .++.|.+.||+|.+.++.++.....+
T Consensus 11 v~~~~Gt~Y~Fs~yS~~Lk~~l~-----------~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 11 VQLCSGTTYTFSAYSPQLKSRLG-----------YSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred HHHhcCcccchhhhhHHHHHHhC-----------CCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 33455577899999999987776 9999999999999999876 48899999999999999999999999
Q ss_pred HHHHHHhh-------hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 118 FLLPLVFH-------QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 118 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
+...+... .+.|.+.+..++.+.+.+...........+.||. +||++.|+.-....+++.+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 98887761 2344555555555555544555556666788985 799999999999999888888877766655
Q ss_pred cchhHHHHHHHHHHHH
Q 026854 191 CHLRLAVILFEVVFVL 206 (232)
Q Consensus 191 ~g~~~~~~~~~~~~~~ 206 (232)
+....+.+.+....+
T Consensus 158 -~~~~fll~la~~~~~ 172 (250)
T PF06813_consen 158 -DPSSFLLFLAVLPAV 172 (250)
T ss_pred -ChHHHHHHHHHHHHH
Confidence 333333344443333
No 188
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.46 E-value=3.6e-12 Score=104.40 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
+....+..+......+....+.|.+.+... +.+..+.+.......++..++.++.|++.||+|||+.+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~----------g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 330 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVH----------GLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATG 330 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 334444455555566667778888876543 4888999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 111 MFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 111 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
+..+..++...+.. .++.+......++.|++.+...+.......+..|+++++.+.++.+...++|+.+|+.+.+.+
T Consensus 331 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 331 GMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877776655543 234445556677788888888888888888999999999999999999999999999999988
Q ss_pred hhc
Q 026854 188 VTS 190 (232)
Q Consensus 188 ~~~ 190 (232)
.+.
T Consensus 411 ~~~ 413 (495)
T PRK14995 411 LSR 413 (495)
T ss_pred HHH
Confidence 653
No 189
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.44 E-value=2.5e-11 Score=97.07 Aligned_cols=162 Identities=9% Similarity=-0.019 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH
Q 026854 34 LWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV 113 (232)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 113 (232)
..+..++..........+++.+.++.+. +.+.............+..+|.++++++.||+++|+.+.++..
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~---------~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~ 307 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIP---------GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAI 307 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 3333444444444555677777754320 1233333344555557788999999999999999999888888
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc--
Q 026854 114 LACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC-- 191 (232)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-- 191 (232)
+..+..++....++... .....+.+++.+..+|..++...+..+++.+..+.++.... +|+.+.|.+.|++.|..
T Consensus 308 ~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~ 384 (410)
T TIGR00885 308 IGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEI 384 (410)
T ss_pred HHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcc
Confidence 88887777776555333 45556677788888899999999999888765556665554 99999999999999954
Q ss_pred ----chhHHHHHHHHHHHHH
Q 026854 192 ----HLRLAVILFEVVFVLA 207 (232)
Q Consensus 192 ----g~~~~~~~~~~~~~~~ 207 (232)
+....|.+...+.+..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 385 AAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred cccCccchHHHHHHHHHHHH
Confidence 3555566544444433
No 190
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.42 E-value=2e-11 Score=97.16 Aligned_cols=142 Identities=10% Similarity=-0.022 Sum_probs=106.4
Q ss_pred CCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 71 KSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
+.+..+.+.......++.++++++.+++.||.++|+.+..+.. .++....+...++.+...+..++.|++.+...+...
T Consensus 237 g~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 237 GITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 3778889999999999999999999999999998887777653 334443444455555555666677777777677777
Q ss_pred hccccccccch-hhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 151 IYAPEIYPTSA-RTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 151 ~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+...|..|++. +|++.++.+...+++..++..+.+.+ +..|.+..+.+.+...++...+.+.+
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77888766655 79999999999999999999998855 56687777776665555555444444
No 191
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.42 E-value=2.6e-12 Score=100.43 Aligned_cols=138 Identities=20% Similarity=0.288 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCC-chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHH
Q 026854 34 LWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSK-DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMF 112 (232)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~ 112 (232)
.....+......+....+.|.+.++.. +.+ ..+.+.......+...++.++.|++.||+|+|+......
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 280 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVL----------GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAI 280 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHH----------HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 333444444556667788888743222 366 577788888899999999999999999999887777777
Q ss_pred HHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH
Q 026854 113 VLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 113 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
....+....... .++........++.|++.+...+....+..|..|+++|+++.|+.+...++++.++|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 281 LLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 776666666554 234456666777788888888999999999999999999999999999999999887
No 192
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.42 E-value=4.8e-12 Score=101.77 Aligned_cols=185 Identities=15% Similarity=0.168 Sum_probs=134.8
Q ss_pred ccchhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHH
Q 026854 16 FSSFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILS 95 (232)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (232)
+.++++++++ +.++.+++..++.....+.+..|.|.|.++.. +++..+.++..++..+...+..+++
T Consensus 248 ~vP~~~i~ts---~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL----------~f~v~~~G~~salP~l~~~~~k~~~ 314 (466)
T KOG2532|consen 248 PVPYKAILTS---PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL----------GFDVRETGFLSALPFLAMAIVKFVA 314 (466)
T ss_pred CCCHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh----------CCChhhhhHHHHHHHHHHHHHHHHH
Confidence 4567777765 67888888999999999999999999997655 5899999999999999999999999
Q ss_pred HHHHhhhch---------HHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhh
Q 026854 96 AIIVDKIGR---------KLSMVLMFVLACIFLLPLVFHQ--SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTT 164 (232)
Q Consensus 96 g~l~dr~gr---------r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~ 164 (232)
|.++||.-+ |..-.++....++..+.+.+.+ +.+...++..+.....|...+-.+.-..+.. ++.-+.
T Consensus 315 g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~ 393 (466)
T KOG2532|consen 315 GQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGF 393 (466)
T ss_pred HHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHH
Confidence 999998744 3344455566666666666543 2222222222222223333333333334434 555699
Q ss_pred hhHHHHHhhhhhhchhHHHHHHHhh---ccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 165 GAGVASAVGRVGGMVCPLVAVGLVT---SCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 165 ~~~~~~~~~~~g~~~~~~i~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
.+|+.+....+.++++|.+.+.+.. ...|+..|.+.+++.+++.++..++
T Consensus 394 l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 394 VMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9999999999999999999999984 2368889999888888887655554
No 193
>PRK11462 putative transporter; Provisional
Probab=99.41 E-value=3.4e-11 Score=97.68 Aligned_cols=117 Identities=13% Similarity=0.081 Sum_probs=78.4
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhhhhhhhhccc
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFH--QSAVVTTVLLFGVRMCATGTITVATIYAP 154 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (232)
.........++.+++.+++++++||+|+|+.+..+..+..+..+.+.+. .+.....+..++.+++.+...+..+++.+
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667778889999999999999999988775555444433333332 22223344445566666666677788888
Q ss_pred cccc-----cchhhhhh--HHHHHhhhhhhchhHHHHHHHhhccch
Q 026854 155 EIYP-----TSARTTGA--GVASAVGRVGGMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 155 e~~p-----~~~r~~~~--~~~~~~~~~g~~~~~~i~~~l~~~~g~ 193 (232)
|..+ +..|..+. +.......+|..+++.+.|.+.+..|+
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7765 23444444 555577889999999999988876543
No 194
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.40 E-value=2.2e-11 Score=97.68 Aligned_cols=140 Identities=13% Similarity=0.010 Sum_probs=93.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGR-KLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
.+..+.++..+...++.++++++.|+++||+|| |+++.++.....+......+.++.+.+.+.+++.++..+...+...
T Consensus 35 ~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 114 (418)
T TIGR00889 35 FSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTN 114 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHH
Confidence 899999999999999999999999999999964 7788877777777766666667777777777777766554444433
Q ss_pred hc----cc----cccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 151 IY----AP----EIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 151 ~~----~~----e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
++ .. |......|.+..| .+|..++|.+.+.+.. .+.+.++++.++..++..+.. +..||++
T Consensus 115 ~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~-~~~~~~f~~~~~~~~~~~~~~-~~~~e~~ 183 (418)
T TIGR00889 115 SISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI-ELSNIQLYITAGSSALLGVFA-LTLPDIP 183 (418)
T ss_pred HHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHH-hcCCCCC
Confidence 32 22 2222223333333 4678888888887732 222335666666555555443 4557753
No 195
>PRK09669 putative symporter YagG; Provisional
Probab=99.38 E-value=9.9e-12 Score=100.54 Aligned_cols=172 Identities=12% Similarity=0.076 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh----hchH-HHHHHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK----IGRK-LSMVLM 111 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr-~~~~~~ 111 (232)
..+.....+.....+++.+.++.. +.+....+....+..+...+..++.|+++|| +||| +.++.+
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~----------gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~ 86 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVF----------GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWF 86 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHH
Confidence 334444444555555555554332 4899999999999999999999999999998 7764 556667
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhhhhhhhhcccccc-ccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 112 FVLACIFLLPLVFHQS------AVVTTVLLFGVRMCATGTITVATIYAPEIY-PTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 112 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
.+..+++..+....++ ..+..+..++.+.+.........++.+|+. ++++|.+..++......+|+.+++.+.
T Consensus 87 ~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~ 166 (444)
T PRK09669 87 AIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIA 166 (444)
T ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6776666655444321 234444444555555566666778899987 568899988888888888888877665
Q ss_pred HHHhhc-------cchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 185 VGLVTS-------CHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 185 ~~l~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
..+... .+|...+.+.+++..+..+..++..+|.
T Consensus 167 ~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 167 LPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 444432 2455566666666666655555555554
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.38 E-value=1.4e-11 Score=110.37 Aligned_cols=167 Identities=11% Similarity=-0.000 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
.++...+..+...+.......+.|.+.++.. +.+....++..+...++.+++.++.|+++||.++++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~ 295 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKETL----------GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP 295 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHc----------CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh
Confidence 3444444444455555566667888875532 377888899999999999999999999999887766555
Q ss_pred HHHHHHHHHHHHHHhh--------------------hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHH
Q 026854 110 LMFVLACIFLLPLVFH--------------------QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVA 169 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 169 (232)
.+.++.++..+.+.+. .+.+.+.+..++.|++.+...+...+++.+..|++.||+++|+.
T Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~ 375 (1140)
T PRK06814 296 IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAAN 375 (1140)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHH
Confidence 5555444444333221 45566667777788888888888999999999999999999999
Q ss_pred HHhhhhhhchhHHHHHHHhhc-cchhHHHHHHHHHHHH
Q 026854 170 SAVGRVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVL 206 (232)
Q Consensus 170 ~~~~~~g~~~~~~i~~~l~~~-~g~~~~~~~~~~~~~~ 206 (232)
+....++..+++.+.+.+.+. .+....+.+.+.+.++
T Consensus 376 ~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 376 NVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999999999999988753 3445444444443333
No 197
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.36 E-value=8.5e-11 Score=93.38 Aligned_cols=153 Identities=14% Similarity=0.083 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV 109 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 109 (232)
++...++..++..............|.+..- +.++............+.+++.++..++++|+|+|+++.
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l----------g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL----------GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEc----------CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 3333444444444444444444555543322 355566666777777778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhhhhhhhhccccccc-------cchhhhhhHHHHHhhhhhhchh
Q 026854 110 LMFVLACIFLLPLVFHQ--SAVVTTVLLFGVRMCATGTITVATIYAPEIYP-------TSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
++.++..++...+.+.+ +.+..++..++.+++.+...+..|++++|..+ .+.-|...+....+..+|..++
T Consensus 307 ~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala 386 (467)
T COG2211 307 IGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALA 386 (467)
T ss_pred HHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 99999999999888854 55666667788889999999999999999864 2333566677778888999999
Q ss_pred HHHHHHHhhccc
Q 026854 181 PLVAVGLVTSCH 192 (232)
Q Consensus 181 ~~i~~~l~~~~g 192 (232)
..+.|++.+..|
T Consensus 387 ~~~~g~~L~~~G 398 (467)
T COG2211 387 GFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHcC
Confidence 999999987665
No 198
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.34 E-value=2.4e-11 Score=92.51 Aligned_cols=178 Identities=16% Similarity=0.145 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
.........+....+-........|......+ .+..+..+.......+..+++..+|.++|++|||+..
T Consensus 78 yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~-----------~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f 146 (528)
T KOG0253|consen 78 YLFFVAGMGWMADAMEMMLLSLILPALDEVWG-----------PSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF 146 (528)
T ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhc-----------hhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh
Confidence 33334444444444444444555565554433 6667777888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 109 VLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
.+.....++..++-..++++.++.+++.+.+++.|+ .|...++-.|..|...|..-+-+. ..+.+|.++...+.-...
T Consensus 147 ~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm 224 (528)
T KOG0253|consen 147 NLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM 224 (528)
T ss_pred hhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999988899999999999999999988 888999999999999999866666 777899999999988888
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 189 TSCHLRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.++||++..........+.+ ...++.||..+
T Consensus 225 ~~~gwr~~l~~~~~pl~~~a-~f~~w~~ESpR 255 (528)
T KOG0253|consen 225 SNFGWRYLLFTSSTPLMFAA-RFLVWVYESPR 255 (528)
T ss_pred HhhhHHHHHHHHHhHHHHHH-HHHhhcccCcc
Confidence 99999977666664444444 44556688754
No 199
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.34 E-value=5.9e-11 Score=96.45 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc----
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSS-GDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIG---- 103 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g---- 103 (232)
....++...++..... +......+.+++ +++ .+..+.+...+...+...+-.+ +|.++||++
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg-----------~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~ 92 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLG-----------LDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGY 92 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcC-----------CCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCc
Confidence 3444555567777777 555444454554 455 8889988888888888777555 999999997
Q ss_pred -hHHHHHHHHHHHH-HHHHHHHhhhhH-HHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhh---hHHHHHhhhhhh
Q 026854 104 -RKLSMVLMFVLAC-IFLLPLVFHQSA-VVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTG---AGVASAVGRVGG 177 (232)
Q Consensus 104 -rr~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~---~~~~~~~~~~g~ 177 (232)
||+.++++.++.. +....+...++. ....+..++.+++.+.......++..|..+ +.+..+ .++.+...++|.
T Consensus 93 rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~ 171 (468)
T TIGR00788 93 TKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGG 171 (468)
T ss_pred cchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHH
Confidence 7777777776653 333333323332 233335667777777777889999999998 544443 344444556899
Q ss_pred chhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 178 MVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 178 ~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
.+++.++|.+.+..+|+..+++.+++.++..+ ...+.+|++
T Consensus 172 ~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~ 212 (468)
T TIGR00788 172 LISSLLGGPLLDKTLTRILFLITAALLLLQLF-VSNLSKERR 212 (468)
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-HHHhccccc
Confidence 99999999999999999999888888777743 344557754
No 200
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.34 E-value=5.9e-11 Score=96.76 Aligned_cols=174 Identities=11% Similarity=0.029 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHh----hhch-HHHHH
Q 026854 35 WVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVD----KIGR-KLSMV 109 (232)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~gr-r~~~~ 109 (232)
.+..+...+.......|++.|.++.. +.+....+....+.-+...+..++.|+++| |+|| |+.++
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~----------Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il 81 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVV----------GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL 81 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh
Confidence 34445555666666666666665442 388999999999999999999999999999 5697 56666
Q ss_pred HHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhhhhhhhhcccccc-ccchhhhhhHHHHHhhhhhhchhHH
Q 026854 110 LMFVLACIFLLPLVFHQS------AVVTTVLLFGVRMCATGTITVATIYAPEIY-PTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
.+...++++..++...++ ..+..+..++...+.........++.+|+. ++++|.+..++.....++|+.+.+.
T Consensus 82 ~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 82 IGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred hhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777666554221 223334444555666667777888999998 5899999998877777777666665
Q ss_pred HHHHHhhcc-------chhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 183 VAVGLVTSC-------HLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 183 i~~~l~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
+...+.+.. ++.....+.+++..+..+..++..||.
T Consensus 162 ~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 162 FTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 554433222 334444455555555555555555664
No 201
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.7e-10 Score=88.97 Aligned_cols=174 Identities=12% Similarity=0.105 Sum_probs=128.3
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHH
Q 026854 19 FFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAII 98 (232)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 98 (232)
..+++++++.+. ..+..++....-.....|++.+..+.. +.+..+.....+....+.++|.+++.++
T Consensus 229 ~~~l~~~~~~~~---gvl~~FlYVG~Eva~gsfl~~y~~~~~----------g~~~~~aa~~~s~~~~~~~vGRFig~~l 295 (422)
T COG0738 229 LSSLFQNKHLRL---GVLAIFLYVGAEVAIGSFLVSYLEELL----------GLNEQQAAYYLSFFWVGFMVGRFIGSAL 295 (422)
T ss_pred HHHHHhChHHHH---HHHHHHHHHhHHHHHHHHHHHHHHhcC----------CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455665544444 344444444444456667788886633 3888999999999999999999999999
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhc
Q 026854 99 VDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGM 178 (232)
Q Consensus 99 ~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 178 (232)
..|+...|.+.+..++..+.++...+.++.. .....++.|.+.+..+|..++...+..|.+ .+..|.......+|+.
T Consensus 296 m~~~~~~k~Laf~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGGA 372 (422)
T COG0738 296 MSRIKPEKYLAFYALIAILLLLAVALIGGVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGGA 372 (422)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecch
Confidence 9999999999888888777777777766643 344456778889999999999999999943 3334444455568999
Q ss_pred hhHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 026854 179 VCPLVAVGLVTSCHLRLAVILFEVVFVLAI 208 (232)
Q Consensus 179 ~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 208 (232)
+.|.+.|++.|+.|....+......|.+..
T Consensus 373 iiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 373 IIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999999999988777664444444443
No 202
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.29 E-value=5.1e-11 Score=96.30 Aligned_cols=161 Identities=10% Similarity=0.031 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh----h
Q 026854 27 LIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK----I 102 (232)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~ 102 (232)
..+.++...+.+++.....|++..|+|.++++.. +.+..++....+...++.+++.+++|+++|| .
T Consensus 271 ~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~----------~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~ 340 (495)
T KOG2533|consen 271 KDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG----------GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF 340 (495)
T ss_pred hchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC----------CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH
Confidence 4467888888999999999999999999997732 4888899999999999999999999999999 6
Q ss_pred chHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhh-hhHHHHHhhhhhhchh
Q 026854 103 GRKLSMVLMFVLACIFL-LPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTT-GAGVASAVGRVGGMVC 180 (232)
Q Consensus 103 grr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~-~~~~~~~~~~~g~~~~ 180 (232)
.+|........+..+.. ..+....+........+....+.....+....+.++....+.|.. ..+......+.++.++
T Consensus 341 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~ 420 (495)
T KOG2533|consen 341 ARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAIS 420 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhh
Confidence 67766666655555444 444334334444444444444555666778888888776655554 4444444445555555
Q ss_pred HHHH-HHHhhccchhHHH
Q 026854 181 PLVA-VGLVTSCHLRLAV 197 (232)
Q Consensus 181 ~~i~-~~l~~~~g~~~~~ 197 (232)
|.+. +.....++|...+
T Consensus 421 ~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 421 GQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred hhhcccccCcchhhhhHH
Confidence 5544 3333445666666
No 203
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.28 E-value=4.1e-11 Score=94.37 Aligned_cols=136 Identities=17% Similarity=0.198 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
.+...+..++.....+....+.|.+.++.. +.+..+.+.......+..+++.+++|+++||+|||+.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 296 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQF----------GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLM 296 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHH
Confidence 444444455555555666777787775432 3777888888888888999999999999999999887777
Q ss_pred HHHHHHHHHHHHHh--hh--hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhh
Q 026854 111 MFVLACIFLLPLVF--HQ--SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGG 177 (232)
Q Consensus 111 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 177 (232)
+......+...+.. .. +.+.......+..+..+...+..+...+|..| ++||++.|+.+..+++|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 297 SFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 76666555554443 22 44444444555556666667778888889887 589999999999888764
No 204
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.28 E-value=3.1e-10 Score=91.56 Aligned_cols=200 Identities=13% Similarity=0.026 Sum_probs=140.4
Q ss_pred hhhhcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCccccccCCCCch--hhHHHHHHHHhhhhhHHH
Q 026854 19 FFTLFS--RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSG-DSKCGSKVLHADKSKDN--SLYVDVFITSFAELPGLI 93 (232)
Q Consensus 19 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 93 (232)
++++++ ++..+.+..+++.+++..+.++.+..|.+.+..+ ..+.++...+ .+++. ...+......+...+.++
T Consensus 246 ~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~--~y~~gvr~G~~~l~~~s~~~~i~s~ 323 (477)
T TIGR01301 246 FGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA--KYDDGVRAGAFGLMLNSVVLGITSI 323 (477)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchh--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445554 3345677778888888888888888777776542 2111110000 01100 123445556666677888
Q ss_pred HHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHhhhh---------------------HHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 94 LSAIIVDKIG-RKLSMVLMFVLACIFLLPLVFHQS---------------------AVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 94 ~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
+..++.+|+| ||+...++.++.++++....+.++ .+..++...+.|+.......+.++
T Consensus 324 ~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfa 403 (477)
T TIGR01301 324 GMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFA 403 (477)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHH
Confidence 8899999999 467778887777777776665322 255667778889999999999999
Q ss_pred ccccccccc--hhhhhhHHHHHhhhhhhchhHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 152 YAPEIYPTS--ARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 152 ~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
++++..|++ ..|..+|+.|.+..+.+.+.....|.+.+..| ....+.+.++..+++++..++.+|+++.
T Consensus 404 l~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 404 LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999954 44899999999999999999988888766665 3445666777778888888888887764
No 205
>PRK11462 putative transporter; Provisional
Probab=99.28 E-value=4e-10 Score=91.52 Aligned_cols=173 Identities=10% Similarity=0.003 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh----hchH-HHHHHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK----IGRK-LSMVLM 111 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr-~~~~~~ 111 (232)
..+.....+.....|+..+..+.- +.+...++....+.-+...+.-++.|+++|| +||| +.++++
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~----------Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g 86 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIF----------GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFG 86 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhh----------CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHH
Confidence 333444444455555555554332 4889999999999999999999999999996 6865 455567
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhhhhhhhhccccccc-cchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 112 FVLACIFLLPLVFHQS------AVVTTVLLFGVRMCATGTITVATIYAPEIYP-TSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 112 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
.+.++++..++...++ ..+..+..++...+.........++.+|+.+ +++|++..++....+.+|+.+++.+.
T Consensus 87 ~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 87 ALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777766654321 2334445555666777777788889999986 78999999999999998888887776
Q ss_pred HHHhhcc-------chhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 185 VGLVTSC-------HLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 185 ~~l~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
..+.+.. +|.....+++++..++..+.+...+|..
T Consensus 167 ~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~ 208 (460)
T PRK11462 167 MPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERV 208 (460)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceecc
Confidence 5555443 3444555555555555555555555543
No 206
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.24 E-value=1e-10 Score=93.01 Aligned_cols=141 Identities=16% Similarity=0.130 Sum_probs=126.4
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
..+...+........+.++.-++.+++.+|+|+-+++..+..+..+=.+...+.+|+|..+..-++.|+..+..+...-+
T Consensus 403 ~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~s 482 (618)
T KOG3762|consen 403 GIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIIS 482 (618)
T ss_pred CcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHH
Confidence 45555567777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhhhhHHHHHhh-hhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 026854 152 YAPEIYPTSARTTGAGVASAVG-RVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
|++...|++.|+++.++..... .+|-.+|++++|.+.+.+|.+..|.++++.+++..+...
T Consensus 483 Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 483 YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776 799999999999999999999999988888776655443
No 207
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.23 E-value=4.1e-11 Score=96.49 Aligned_cols=146 Identities=15% Similarity=0.138 Sum_probs=111.3
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHh----hhchHHH-HHHHHHHHHHHHHHHHhh-h-------hHHHHHHHHHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVD----KIGRKLS-MVLMFVLACIFLLPLVFH-Q-------SAVVTTVLLFGV 138 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr~~-~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~ 138 (232)
.+....+....+.-+...+..++.|.++| |+|||+. ++++....+++..++... + ...+..+..++.
T Consensus 34 l~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~ 113 (428)
T PF13347_consen 34 LSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILF 113 (428)
T ss_pred CCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHH
Confidence 88889999999999999999999999999 7996654 556778888877777654 3 122334455555
Q ss_pred HHHHhhhhhhhhhccccccc-cchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc-------chhHHHHHHHHHHHHHHHH
Q 026854 139 RMCATGTITVATIYAPEIYP-TSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC-------HLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 139 g~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-------g~~~~~~~~~~~~~~~~~~ 210 (232)
.++.........++.+|+.+ +++|.+..+.......+|..+...+.+.+.+.. ++.....+.+++..+..++
T Consensus 114 ~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i 193 (428)
T PF13347_consen 114 DIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLI 193 (428)
T ss_pred HHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhh
Confidence 67777777888899999997 578999999998888888877777777666443 3666677777777777777
Q ss_pred Hhccccc
Q 026854 211 SLLFPFE 217 (232)
Q Consensus 211 ~~~~~~e 217 (232)
..+..+|
T Consensus 194 ~~~~~ke 200 (428)
T PF13347_consen 194 TFFFVKE 200 (428)
T ss_pred hhheeee
Confidence 7777777
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.22 E-value=1.7e-09 Score=85.96 Aligned_cols=134 Identities=18% Similarity=0.212 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc-hHHHHHHHHHHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIG-RKLSMVLMFVLA 115 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~~~~~~~~~ 115 (232)
.++.....+-....+.|.++++.| .+..+++...++..+..+++.+++|+++||.+ +|+.+.+..++.
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G-----------~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~ 78 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRG-----------FSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLS 78 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 344444444455567888888776 99999999999999999999999999999986 677777777777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHH
Q 026854 116 CIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 183 (232)
++........++++.+....++..++..+..|...++..+... +++.-.|-....+.+|-+++...
T Consensus 79 ~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 79 ALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 7776666667777777777777777777777777777777665 34555666777777776666544
No 209
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.21 E-value=4e-09 Score=80.72 Aligned_cols=149 Identities=13% Similarity=-0.001 Sum_probs=110.2
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
++..++............+...+.|.++||+|||+.-+..+++..++.+... .++...+++.+++.|+.....++..-+
T Consensus 66 ~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS~FEs 144 (354)
T PF05631_consen 66 FSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFSAFES 144 (354)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999998888888888886544 467888999999999998888777766
Q ss_pred cc-ccc----cccchhhhhhHHHHHh-hhhhhchhHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 152 YA-PEI----YPTSARTTGAGVASAV-GRVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 152 ~~-~e~----~p~~~r~~~~~~~~~~-~~~g~~~~~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
+. .|. +|++..+...+..... +.+-++.+..++-++.+..+ ...+|.....+..++.+++....+|+.+.
T Consensus 145 W~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 145 WMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 54 443 4555445444444422 23344445555556666554 46788888888888888777777887654
No 210
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.19 E-value=3e-09 Score=84.75 Aligned_cols=118 Identities=13% Similarity=0.055 Sum_probs=83.4
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHH-HHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFV-LACIFLLPLVF--HQSAVVTTVLLFGVRMCATGTITV 148 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 148 (232)
.+..+.++......++.++++++.+++.||.+++........ ...+....... ..+.+.......+.+++.+...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 319 (394)
T PRK11652 240 LSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPL 319 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 677777877777788888888999999999884433322222 22122111111 223445555667777777777888
Q ss_pred hhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 149 ATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 149 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
...+..|.+| +.++++.++.+....+|+.+++.+.+.+.+.
T Consensus 320 ~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 320 ATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 8888889887 5689999999999999999999999887655
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.19 E-value=1.9e-10 Score=90.37 Aligned_cols=172 Identities=12% Similarity=0.093 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 32 VLLWVLFFANAFSYYGAVLLTSKLSSG-DSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
+.....++...+.+-....+.|.++++ . |.+.++.+...++..+..++.+++.|.++||+|.||-++.
T Consensus 10 ~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~-----------GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~ 78 (412)
T PF01306_consen 10 WWLSLFYFFYFFIWGIFLPFFPIWLTQVA-----------GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLW 78 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccc-----------CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHH
Confidence 333334444444433444445555543 3 3999999999999999999999999999999995554443
Q ss_pred HHHHHH--HHHHHHHh-----hhhHHH-HHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHH
Q 026854 111 MFVLAC--IFLLPLVF-----HQSAVV-TTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 111 ~~~~~~--~~~~~~~~-----~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
...... .+.+.... ..|.+. .++..+..++...+..|+.-+++.+. .+..+.-.|=....+.+|.++++.
T Consensus 79 ~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~ai~s~ 156 (412)
T PF01306_consen 79 FIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFAIASL 156 (412)
T ss_dssp HHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHHHHHH
Confidence 332222 22222211 112211 11111222222333334444433333 233455577788899999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHhccccc
Q 026854 183 VAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 183 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
++|.+.+. +.+..+++......+..++.....|+
T Consensus 157 ~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 157 LAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred Hhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999875 55667777666555555555555443
No 212
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.15 E-value=2.9e-10 Score=90.65 Aligned_cols=186 Identities=14% Similarity=0.111 Sum_probs=134.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
+.+||..++..+..+.....++....-.-.|.++.. .+.+.+-.|+..+...++..++++..|+...|.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD---------~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~ 100 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLD---------PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGS 100 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcC---------CCCCcchhhHHHHHHHHHHHhcchhhcccccccCC
Confidence 456777777777777666655444322333443311 12667778999999999999999999999999986
Q ss_pred -HHHHHHHHHHHHHHHHHHH-h---hh-hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhc
Q 026854 105 -KLSMVLMFVLACIFLLPLV-F---HQ-SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGM 178 (232)
Q Consensus 105 -r~~~~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 178 (232)
|+.++.+.+++.++.++.. . .+ ..+.+++.+++.|++. +.....-.|+++..-.++|.++++.......+|..
T Consensus 101 ~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~i 179 (488)
T KOG2325|consen 101 VKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGII 179 (488)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHH
Confidence 7888888888888877763 3 33 5677888899988776 44578889999988888999999988887778888
Q ss_pred hhHHHHHHHhhcc--c-----------hhHHHHHHHHHHHHHHHHHhcccccccC
Q 026854 179 VCPLVAVGLVTSC--H-----------LRLAVILFEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 179 ~~~~i~~~l~~~~--g-----------~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 220 (232)
+||.+...+.... | +..+-|+.++..++..++..++.+|..+
T Consensus 180 lGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 180 LGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 8877765543210 1 2345667777777777777777776543
No 213
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.15 E-value=5.4e-09 Score=83.91 Aligned_cols=170 Identities=9% Similarity=-0.114 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
|.++...+.........+....+.|.+.++.. +.+..+.++.......+.++++.+.+.+.+|.++++..
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~----------g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 287 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAG----------GMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFI 287 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH
Confidence 44444444455555566666677888876553 37888888877777778888888888776544443333
Q ss_pred HHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHH
Q 026854 109 VLMFVLACIFLLPLV-----FHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 109 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 183 (232)
.....+..++...+. ..++.+..++..++.+++.+...+......-+ -....+|++.++.+.....+...++..
T Consensus 288 ~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~ 366 (413)
T PRK15403 288 WRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEI 366 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222221 12222223455556666666666665532211 112236899999999888888899999
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHH
Q 026854 184 AVGLVTSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 184 ~~~l~~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
.+++.+. +....+....++..+....
T Consensus 367 ~g~~~~~-~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 367 GRWLWFN-GGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHc-CCchHHHHHHHHHHHHHHH
Confidence 9988776 5555666555554444333
No 214
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.15 E-value=1.7e-10 Score=93.85 Aligned_cols=122 Identities=10% Similarity=0.026 Sum_probs=102.9
Q ss_pred CCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHH
Q 026854 71 KSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF----------HQSAVVTTVLLFGVRM 140 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~ 140 (232)
+.++...+......+++.+++..+.+++.+|++.|+++.++.++..++...... .++.+......++.++
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~ 363 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEV 363 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHH
Confidence 589999999999999999999999999999999999999999888887654321 1223334445566777
Q ss_pred HHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 141 CATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 141 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
..+........++++..|++.+|+..++.++..++|..+++.+++.+.+..|
T Consensus 364 ~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 364 LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7777777889999999999999999999999999999999999999998877
No 215
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.14 E-value=3e-09 Score=85.53 Aligned_cols=138 Identities=20% Similarity=0.194 Sum_probs=113.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchh
Q 026854 83 ITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSAR 162 (232)
Q Consensus 83 ~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r 162 (232)
..++..++.++..|.++||+|||..+........+..+...+.. ++.++..-+. .+.....+...++++|....+.|
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~l~-g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFLLLGLS-GGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhhhcccc-cchhhhhhhhhhheeeccchhHH
Confidence 34677888999999999999999999999988888877777654 3333322222 23345668889999999999999
Q ss_pred hhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 026854 163 TTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGREL 223 (232)
Q Consensus 163 ~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 223 (232)
....|+.+.....+..++|.+++.+.+..|....+.+..+...+..+....++||+..++.
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 9999999999999999999999999999999999999999999999999999999865443
No 216
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.12 E-value=1.2e-08 Score=77.96 Aligned_cols=158 Identities=12% Similarity=-0.003 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 026854 44 SYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLV 123 (232)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 123 (232)
........++.+.++.+ .+.+.+++..++..++....+++..++.+|+|.++.+..+.++..++..+=.
T Consensus 27 ~itsvgPLL~~Ir~~~g-----------ls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~ 95 (395)
T COG2807 27 AITSVGPLLDEIRQDLG-----------LSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRS 95 (395)
T ss_pred hhhhhhhhHHHHHHHhc-----------ccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence 34455566777776666 9999999999999999999999999999999999999999988888777665
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc-chhHHHHHHHH
Q 026854 124 FHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC-HLRLAVILFEV 202 (232)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-g~~~~~~~~~~ 202 (232)
.. +...++....+.|.+.+..+...+..+-+.||++. +..+|++.....+++.+++.+...+.++. ||+....+.+.
T Consensus 96 ~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 96 LG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred cc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 55 55667777888899999999999999999998875 88899999999999999999998888887 79999888888
Q ss_pred HHHHHHHHHhcc
Q 026854 203 VFVLAIASSLLF 214 (232)
Q Consensus 203 ~~~~~~~~~~~~ 214 (232)
.+++..+..+..
T Consensus 174 ~allAl~~WlPq 185 (395)
T COG2807 174 LALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHhhh
Confidence 888777665543
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.5e-08 Score=80.73 Aligned_cols=177 Identities=14% Similarity=0.068 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh----hch-HHH
Q 026854 33 LLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK----IGR-KLS 107 (232)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~gr-r~~ 107 (232)
.-...-+.....+.....|+..+.++.. |.+...++....+.=+...+.-++.|.++|| +|| |+.
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~----------Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~ 85 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVF----------GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPW 85 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhccc----------CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHH
Confidence 3344455566666666777777776654 5899999999999899999999999999996 675 456
Q ss_pred HHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHHHHHHhhhhhhhhhccccccc-cchhhhhhHHHHHhhhhhhchh
Q 026854 108 MVLMFVLACIFLLPLVFHQ------SAVVTTVLLFGVRMCATGTITVATIYAPEIYP-TSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
++.+.+..++...++...+ +....++...+.+.+....+....++.+|+.+ +++|.+..+.-.....+|..+.
T Consensus 86 lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~ 165 (467)
T COG2211 86 LLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLV 165 (467)
T ss_pred HHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677788888777777644 23455666677788888888888999999974 6889999999999999998888
Q ss_pred HHHHHHHhhcc-------chhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 181 PLVAVGLVTSC-------HLRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 181 ~~i~~~l~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
..+.+.+.+.. |++....+++++..+..+.+++-.+|..
T Consensus 166 ~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 166 AVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred HHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 88887776543 4555555666666666666666656654
No 218
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.04 E-value=2.1e-08 Score=81.86 Aligned_cols=140 Identities=12% Similarity=0.032 Sum_probs=105.4
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhch-----HHHH--HHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHHH
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGR-----KLSM--VLMFVLACIFLLPLVF---------HQSAVVTTVLLFGVRM 140 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~gr-----r~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~ 140 (232)
..+..++..+.-++..++..++-.|.+| +... .++.++.+++...+.+ ..+.+++....++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 4566666666666666665544444443 2333 6677777777666553 3577888888899999
Q ss_pred HHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccc
Q 026854 141 CATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 141 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 216 (232)
+.....|...++..|..|++.||+.+|+......+|..+++.+.....+..++...+...++..++..++.++..|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887777667777777777777766666655444
No 219
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.03 E-value=1.7e-08 Score=84.64 Aligned_cols=142 Identities=12% Similarity=0.131 Sum_probs=109.3
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhhh--------HHHHHHHHHHHHHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDK-IGRKLSMVLMFVLACIFLLPLVFHQS--------AVVTTVLLFGVRMCA 142 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~ 142 (232)
.+...+...........-+..+++|+++|+ +||++.+.++.++..++..++.+... ....++...+..++.
T Consensus 20 ~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~ 99 (654)
T TIGR00926 20 FSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGT 99 (654)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhc
Confidence 667777777777777777888999999997 69999999999998888877766211 122445556667778
Q ss_pred hhhhhhhhhccccccccc---hhhhhhHHHHHhhhhhhchhHHHHHHHhhcc-------chhHHHHHHHHHHHHHHHHHh
Q 026854 143 TGTITVATIYAPEIYPTS---ARTTGAGVASAVGRVGGMVCPLVAVGLVTSC-------HLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 143 ~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-------g~~~~~~~~~~~~~~~~~~~~ 212 (232)
|+.-+...+...|.++++ .|-+...+.+...++|+.+++.+.+++.+.. +|+..|.+.+++.+++.++..
T Consensus 100 GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 100 GGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 888899999999988754 4678888999999999999999999987543 588888887777777665544
Q ss_pred c
Q 026854 213 L 213 (232)
Q Consensus 213 ~ 213 (232)
.
T Consensus 180 ~ 180 (654)
T TIGR00926 180 A 180 (654)
T ss_pred H
Confidence 3
No 220
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=2.8e-08 Score=80.64 Aligned_cols=139 Identities=11% Similarity=0.111 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh----chHHHH-HHH
Q 026854 37 LFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI----GRKLSM-VLM 111 (232)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----grr~~~-~~~ 111 (232)
..+.....+.....+++.|.++.. +.+..+.+.......+...+..++.|+++||. |||+.. ..+
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~----------gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~ 85 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVA----------GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFG 85 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHH
Confidence 344444444444444555554432 38889999999999999999999999999996 766644 555
Q ss_pred HHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHhhhhhhhhhccccccc-cchhhhhhHHHHHhhh-----hhhc
Q 026854 112 FVLACIFLLPLVFHQ-------SAVVTTVLLFGVRMCATGTITVATIYAPEIYP-TSARTTGAGVASAVGR-----VGGM 178 (232)
Q Consensus 112 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~-----~g~~ 178 (232)
.+...+....+...+ ...+......+.+.+.+...+...++..|+.+ +++|.+..++-....+ ++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~ 165 (448)
T PRK09848 86 TAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFL 165 (448)
T ss_pred HHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554544444432211 12223334445566666666666677777664 4678876665543333 3444
Q ss_pred hhHHHHH
Q 026854 179 VCPLVAV 185 (232)
Q Consensus 179 ~~~~i~~ 185 (232)
++|.+.+
T Consensus 166 ~~p~i~~ 172 (448)
T PRK09848 166 IGPSIKN 172 (448)
T ss_pred HHHHHHH
Confidence 4555444
No 221
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=9.3e-08 Score=75.07 Aligned_cols=119 Identities=17% Similarity=0.057 Sum_probs=91.0
Q ss_pred CchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh------hHH--HHHHHHHHHHHHHhh
Q 026854 73 KDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ------SAV--VTTVLLFGVRMCATG 144 (232)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~g~~~~~ 144 (232)
+....-+...++.+.+++..+.+.|+.||+|-|...+++..+.+++..+-..+. ..+ .......+.+...-.
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF 156 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence 556667889999999999999999999999999999999999999888766622 222 333444444444433
Q ss_pred hhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 145 TITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 145 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
......-...-+||+++|+++..+..+...+|..++..+.+.+..+.
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 34444555667899999999999999998888888888877776654
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.89 E-value=6.7e-08 Score=79.43 Aligned_cols=137 Identities=9% Similarity=-0.055 Sum_probs=92.0
Q ss_pred hHHHHHHHHhhhhhHHHHH----HHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHh
Q 026854 77 LYVDVFITSFAELPGLILS----AIIVDKIGRKLSMVLMFVLACIFLLPLVFHQS---------AVVTTVLLFGVRMCAT 143 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~----g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~ 143 (232)
..+..++..+..++..++. +++.||.+.++.+.++..+.+++.+.+....+ .++.....++.+++..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 3445555555555555555 55555555667788888888888887766443 4567778888999999
Q ss_pred hhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh----------ccchhHHHHHHHHHHHHHHHHHhc
Q 026854 144 GTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT----------SCHLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 144 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
...|...+++.+..|++.||+.+|+......+|..++..+...... ..+....|...++..++.+++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998776666666665555432210 112445566666555544433333
No 223
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.87 E-value=2.3e-08 Score=78.43 Aligned_cols=184 Identities=16% Similarity=0.111 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch-HHH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR-KLS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~ 107 (232)
+++.+..+.+......+++....+...+...+ ++....+.......+++++++.+.|.+.||.+. |.+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sg-----------Y~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~ 334 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALCPSG-----------YEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT 334 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcccccc-----------CCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 56667777777777777777666664444444 566788888999999999999999999999874 455
Q ss_pred HHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHH
Q 026854 108 MVLMFVLACIFLLPLVF----HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLV 183 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 183 (232)
+++......++...+.. ....+.+.....+.|++..+..|+..-+..|..-|..-++..|+.+..+.+.+++-..+
T Consensus 335 ~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~ 414 (480)
T KOG2563|consen 335 TLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFI 414 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHH
Confidence 55555554444322222 22334556666777888888889999999998655556778999999999999999999
Q ss_pred HHHHhhccc----hhHHHHHHHHHHHHHHHHHhcccccccCCCc
Q 026854 184 AVGLVTSCH----LRLAVILFEVVFVLAIASSLLFPFETKGREL 223 (232)
Q Consensus 184 ~~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 223 (232)
.+...+..+ ++..-+.......+..++..++.|+-++.+.
T Consensus 415 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~ 458 (480)
T KOG2563|consen 415 MGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRA 458 (480)
T ss_pred HHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence 888887766 4444455555566666666666555544433
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.76 E-value=3.2e-07 Score=75.20 Aligned_cols=139 Identities=12% Similarity=-0.049 Sum_probs=97.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchHH-------HHHHHHHHHHHHHHHHH-----h-----hhhHHHHHHHHHHHHH
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRKL-------SMVLMFVLACIFLLPLV-----F-----HQSAVVTTVLLFGVRM 140 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~-------~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~g~ 140 (232)
.+...+..+..++.+++.+++.||+++|+ -+.++.++.+++.+.+. . ..+.++.....++.++
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 34444555667778888999999999886 36666666666554321 1 1245667777888899
Q ss_pred HHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh----------ccchhHHHHHHHHHHHHHHHH
Q 026854 141 CATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT----------SCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 141 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~----------~~g~~~~~~~~~~~~~~~~~~ 210 (232)
+.+...+...+.+.+..|++.++.++|+.+....+|+.++..+...... .......|...++...+..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888877754421 001234455555555555555
Q ss_pred Hhcccc
Q 026854 211 SLLFPF 216 (232)
Q Consensus 211 ~~~~~~ 216 (232)
.+...|
T Consensus 472 ~~~~~~ 477 (489)
T PRK10207 472 MALMVP 477 (489)
T ss_pred HHHHHH
Confidence 444333
No 225
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.73 E-value=1.5e-06 Score=70.85 Aligned_cols=144 Identities=19% Similarity=0.245 Sum_probs=103.8
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH-HHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhhhhhhhhcc
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRKLSMV-LMFVLACIFLLPLVFH--QSAVVTTVLLFGVRMCATGTITVATIYA 153 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 153 (232)
.....++..+...+..++.|-++|+-|+||.++ +...+..++...+.+. ++.+...++.++..++.........+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677788888899999999999998665554 4445555556655552 3334444555555667777788899999
Q ss_pred ccccccchh--------------------------hhhhHHHHHhhhhhhchhHHHHHHHhhcc--------chhHHHHH
Q 026854 154 PEIYPTSAR--------------------------TTGAGVASAVGRVGGMVCPLVAVGLVTSC--------HLRLAVIL 199 (232)
Q Consensus 154 ~e~~p~~~r--------------------------~~~~~~~~~~~~~g~~~~~~i~~~l~~~~--------g~~~~~~~ 199 (232)
+|+.+++.+ ++..+.....+++|+.+.-.+.-.+.... ..+..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999998888 99999999999999988776655443222 23566777
Q ss_pred HHHHHHHHHHHHhcccccccC
Q 026854 200 FEVVFVLAIASSLLFPFETKG 220 (232)
Q Consensus 200 ~~~~~~~~~~~~~~~~~e~~~ 220 (232)
.++..++..+..+++.||.++
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 777777777777888787755
No 226
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.70 E-value=1.9e-06 Score=65.56 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=95.9
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhhhhhhhhhc
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQS--AVVTTVLLFGVRMCATGTITVATIY 152 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~ 152 (232)
...++......+...++.++.|.+.||+|||+.+..+.....++.+...+..+ .+...+.+...|++.+...+...++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 35677888888888888899999999999998887777654444444444433 6667777777888888888999999
Q ss_pred ccccccc-chhhhhhHHHHH-hhhhhhchhHHHHHHHhhc--cchhHHHHHHHHH
Q 026854 153 APEIYPT-SARTTGAGVASA-VGRVGGMVCPLVAVGLVTS--CHLRLAVILFEVV 203 (232)
Q Consensus 153 ~~e~~p~-~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~~--~g~~~~~~~~~~~ 203 (232)
..|..|. +.|+...+.... ...++..++|.+.+.+... .+|+..+......
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 9999998 678888888887 5677888888777766554 4566544444333
No 227
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.70 E-value=1.9e-06 Score=59.09 Aligned_cols=116 Identities=16% Similarity=0.064 Sum_probs=93.1
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.++........+......+++++.+.+.+++|.|+.++++.+...+-.... +.++.+.++....+.|++.+..++....
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 344444556666777788888999999999999999999998887655443 3556677888888999999999999999
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
++.+..+++.|++-.++.......+.++|..+.-.+.
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888888877776655443
No 228
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.64 E-value=1.3e-06 Score=70.54 Aligned_cols=146 Identities=21% Similarity=0.192 Sum_probs=105.4
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhh---c--hHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKI---G--RKLSMVLMFVLACIFLLPLVF----HQSAVVTTVLLFGVRMCA 142 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---g--rr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 142 (232)
.++.+.........+. ....++.|.++|-+ | ||+-++++.++..++...+.. ..+.....+..++..++.
T Consensus 22 ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~ 100 (433)
T PF03092_consen 22 LSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGY 100 (433)
T ss_pred CCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHH
Confidence 7777766666555544 34578899999986 3 555566676666555554444 233444555556666677
Q ss_pred hhhhhhhhhccccccc--cchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccc
Q 026854 143 TGTITVATIYAPEIYP--TSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 218 (232)
Q Consensus 143 ~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 218 (232)
.....+.-+...|... ++.|+.-.+..+....+|++++..+.|.+.+..+.+..+.+.+.+..+..+...+..+|.
T Consensus 101 a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 101 AFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEER 178 (433)
T ss_pred HHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhc
Confidence 7777888888888862 233888888999999999999999999999999988888888888877777777776663
No 229
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.64 E-value=5.8e-07 Score=53.92 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHH
Q 026854 36 VLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVL 114 (232)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 114 (232)
..++...........+.|.+.++.| .+..+.+...++..+..+++.+++|+++||++|++..+.....
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~G-----------l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLG-----------LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3455555566667778888888776 9999999999999999999999999999999988877766544
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.63 E-value=4.1e-06 Score=65.54 Aligned_cols=120 Identities=11% Similarity=0.040 Sum_probs=103.6
Q ss_pred CCCchhhHHHHHHHHhhhhhHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhh
Q 026854 71 KSKDNSLYVDVFITSFAELPGLILSAIIVD-KIGRKLSMVLMFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTI 146 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~ 146 (232)
+.+..+..........+..++....|++.. |.++++...+++....++...+.. ..+.+.+....++.|++.|.+.
T Consensus 240 gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~ 319 (403)
T PF03209_consen 240 GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFT 319 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHH
Confidence 489999999999999999999999998887 678888888888888877766555 4567778888899999999988
Q ss_pred hhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 147 TVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 147 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
....+...++.+++..|..+|.....+.++..++..++|.+.|.
T Consensus 320 vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 320 VGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999988774
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.56 E-value=6e-06 Score=68.48 Aligned_cols=153 Identities=14% Similarity=0.180 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH-HH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK-LS 107 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-~~ 107 (232)
|.+...++..+.....+|....+.|.........+ ..+....++......++..++.++.|.+..+++|- +.
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d-------~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~ 382 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSD-------PISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ 382 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------CcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH
Confidence 44555556666677777887777777654332000 01112456677777888889999999999998864 45
Q ss_pred HHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 108 MVLMFVLACIFLLPLVF--HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 108 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
++++..++.++.-++.. .++....+...++.+++.+..........+-..|++.-+++.|+..++..+|+.++..+..
T Consensus 383 li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 383 LIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 55666565554344433 3444455667778888888877777888888889999999999999999999999988876
Q ss_pred HHh
Q 026854 186 GLV 188 (232)
Q Consensus 186 ~l~ 188 (232)
.+.
T Consensus 463 ~I~ 465 (599)
T PF06609_consen 463 AIF 465 (599)
T ss_pred HHH
Confidence 544
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.52 E-value=2.6e-06 Score=66.58 Aligned_cols=132 Identities=12% Similarity=0.021 Sum_probs=91.7
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc-----hHHHHHH-HHHHHHHHHHHHHh-----hh-------hHH----
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIG-----RKLSMVL-MFVLACIFLLPLVF-----HQ-------SAV---- 129 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----rr~~~~~-~~~~~~~~~~~~~~-----~~-------~~~---- 129 (232)
.+..-.+....+..+.+ +..+..|+.+|+.+ ||..+++ +......+.....+ .. +.+
T Consensus 12 vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~ 90 (403)
T PF03209_consen 12 VPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLA 90 (403)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHH
Confidence 44455555555555444 46899999999988 7766554 44444443333322 12 121
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHH
Q 026854 130 VTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVF 204 (232)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~ 204 (232)
...+...+.|.+.+...+...++++|..|+++|+++.++.+...-+|.+++..+.+.+.+.+......-+.....
T Consensus 91 ~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 91 LAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 233445667777777888899999999999999999999999999999999999999998876555444444333
No 233
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.47 E-value=8.5e-05 Score=60.30 Aligned_cols=153 Identities=8% Similarity=0.007 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhH-HHHHHHHHhhhch
Q 026854 26 KLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPG-LILSAIIVDKIGR 104 (232)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~gr 104 (232)
..+++++...+..++..+.++..-..-..+.... .+.......+.-+...+...+. .++.+++++|++|
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~----------~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~ 73 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYTILRDTKDTLVVTA----------KGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSK 73 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecc----------cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 3456667777777777777666543333322110 0122244455555554544444 8889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-----h--------------------------hHHHHHHHHHHHHHHHhhhhh-hhhhc
Q 026854 105 KLSMVLMFVLACIFLLPLVFH-----Q--------------------------SAVVTTVLLFGVRMCATGTIT-VATIY 152 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~-----~--------------------------~~~~~~~~~~~~g~~~~~~~~-~~~~~ 152 (232)
++++-+..........+..+. + +.|...+..+...+......+ +.|.+
T Consensus 74 ~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f 153 (472)
T TIGR00769 74 EALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF 153 (472)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998777665555544443331 0 122222333334444444555 88999
Q ss_pred cccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh
Q 026854 153 APEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 153 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
++|.+..++-.+-.++....+++|..+++.+..++.
T Consensus 154 andi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 154 ANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988876
No 234
>PTZ00207 hypothetical protein; Provisional
Probab=98.44 E-value=1.8e-06 Score=71.69 Aligned_cols=180 Identities=8% Similarity=0.025 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCccccccCCC-Cchh-hHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 28 IRTTVLLWVLFFANAFSYYGAVLLTSKLSSGD-SKCGSKVLHADKS-KDNS-LYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
...+|++++.+++..........-+.++.+.. + . .+.+ .....++.++++.+|.+..|.++...-|
T Consensus 352 ~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g-----------~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~ 420 (591)
T PTZ00207 352 TARLWCLLWSIFCCVGAHFVIIFNARFIYTALAG-----------EAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQK 420 (591)
T ss_pred chhHHHHHHHHHHhhCchheeeecHHHHHHHhcC-----------CCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHh
Confidence 45677888888877666666655566666555 3 2 2221 1226778889999999999988833322
Q ss_pred HH--------HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhh
Q 026854 105 KL--------SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVG 176 (232)
Q Consensus 105 r~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 176 (232)
|+ ..+....++.+..+++........+++..++.|++.|..+++.....+|+|. ++-|+-..+......+|
T Consensus 421 ~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pig 499 (591)
T PTZ00207 421 RRAEDRVPITIALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLS 499 (591)
T ss_pred hccccccchhHHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHH
Confidence 22 2222223355555555554333578888899999999999999999999998 77666666655555566
Q ss_pred hchh-HHHHHHHhhcc----------c---hhHHHHHHHHHHHHHHHHHhccccccc
Q 026854 177 GMVC-PLVAVGLVTSC----------H---LRLAVILFEVVFVLAIASSLLFPFETK 219 (232)
Q Consensus 177 ~~~~-~~i~~~l~~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~~e~~ 219 (232)
+.+- -.++|.+.|+- | .+.++.+.++++..+.+....+.-+++
T Consensus 500 s~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 500 AIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 5554 44556666532 1 457888888888888777665544443
No 235
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.44 E-value=8.7e-07 Score=68.75 Aligned_cols=138 Identities=14% Similarity=0.031 Sum_probs=96.1
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhc
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIG--RKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIY 152 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 152 (232)
-+.++...-..+...++..+.|.++||++ |-.....+.+..+.+....-+.++...+++-.+..+++.+...+.....
T Consensus 306 w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 306 WEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred cceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 36677777788899999999999999999 4333334444555555555556666666665555555554443333333
Q ss_pred cccccc---cc---hhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 026854 153 APEIYP---TS---ARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 153 ~~e~~p---~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
..++.. .+ .-|...++......+|..+||.++|.+.+..|..|...+.++...+-.-+..
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 333332 22 5578888999999999999999999999999999888888887776654443
No 236
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.30 E-value=1.5e-07 Score=69.90 Aligned_cols=120 Identities=13% Similarity=0.117 Sum_probs=98.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDK-IGRKLSMVLMFVLACIFLLPLVF---HQSAVVTTVLLFGVRMCATGTIT 147 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~ 147 (232)
.+.++..+..++++..+++-.+++|++.|| +|-|...++-+....++-+.... .+..|.+...+++.|++.-....
T Consensus 76 i~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAV 155 (459)
T KOG4686|consen 76 IEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAV 155 (459)
T ss_pred cceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhh
Confidence 556667788888999999999999999997 67776666655555566555543 68889999999999998877778
Q ss_pred hhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 148 VATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 148 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
.-..++.-+|..++-+.++|+..+..++|+.+--.+.+++.+..
T Consensus 156 aQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 156 AQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred hhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 88899999999999999999999999999988777777776643
No 237
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.26 E-value=2.7e-05 Score=66.01 Aligned_cols=152 Identities=11% Similarity=0.110 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHh-hhhhHHHHHHHHHhhhc--hH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSF-AELPGLILSAIIVDKIG--RK 105 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g--rr 105 (232)
+.++...+..++.....+.+..|.|.+.++.. +.+..++++......+ +.+++.+++|+++||++ .|
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~----------g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~ 399 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQY----------GISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVK 399 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHH
Confidence 45556666677777788888899999997543 4888888888777665 56899999999999998 55
Q ss_pred HHHHHHHHHHHHHHHHHH------------------------------h-------hh----------------------
Q 026854 106 LSMVLMFVLACIFLLPLV------------------------------F-------HQ---------------------- 126 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~------------------------------~-------~~---------------------- 126 (232)
+.+..+.....++.+... - ..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC 479 (633)
T TIGR00805 400 KAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGC 479 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCC
Confidence 666666666555533311 0 00
Q ss_pred ------------------------------------h-HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHH
Q 026854 127 ------------------------------------S-AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVA 169 (232)
Q Consensus 127 ------------------------------------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 169 (232)
+ ...+++..++..+............+-...|+++|+.+.|+.
T Consensus 480 ~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~ 559 (633)
T TIGR00805 480 SMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQ 559 (633)
T ss_pred CCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHH
Confidence 0 011112222222222233344455566778999999999999
Q ss_pred HHhhh-hhhchhHHHHHHHhhc
Q 026854 170 SAVGR-VGGMVCPLVAVGLVTS 190 (232)
Q Consensus 170 ~~~~~-~g~~~~~~i~~~l~~~ 190 (232)
....+ +|.+-+|.+.|+++|.
T Consensus 560 ~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 560 WLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHHHHHhcCCChhHHHhhhhhc
Confidence 98886 7889999999999985
No 238
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.24 E-value=8.8e-06 Score=62.86 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=74.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc--------------
Q 026854 125 HQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS-------------- 190 (232)
Q Consensus 125 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-------------- 190 (232)
..++..+++..++.+.+.+...+....+++++.|++.+++.+++...+..+|..++|.+.+.+...
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 456778888889999999999999999999999999999999999999999999999999988742
Q ss_pred --cchhHHHHHHHHHHHHHH-HHHhccccccc
Q 026854 191 --CHLRLAVILFEVVFVLAI-ASSLLFPFETK 219 (232)
Q Consensus 191 --~g~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 219 (232)
..|+.++++.+.+..+.. ++.+.-.||.+
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~ 118 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAIIFAFLPLPELQ 118 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 246677775655544443 33344445543
No 239
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.17 E-value=4.3e-05 Score=46.35 Aligned_cols=78 Identities=8% Similarity=0.013 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 42 AFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
.+..+.+...+|...++.+ .+..+.++..+...++..+|.+...++.++.++++.+..+.+...+..+.
T Consensus 5 GigRFayTplLP~M~~~~~-----------ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGG-----------LSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHhcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 4556777788999988776 99999999999999999999999999999988899999999999999998
Q ss_pred HHhhhhHHH
Q 026854 122 LVFHQSAVV 130 (232)
Q Consensus 122 ~~~~~~~~~ 130 (232)
+.+.++.+.
T Consensus 74 ma~~~~~~~ 82 (85)
T PF06779_consen 74 MALTHSFWL 82 (85)
T ss_pred HHHHhchHH
Confidence 888776554
No 240
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.13 E-value=2.3e-05 Score=60.78 Aligned_cols=121 Identities=17% Similarity=0.087 Sum_probs=101.3
Q ss_pred CCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 026854 70 DKSKDNSLYVDVFITSFAELPGLILSAIIVDKIG--RKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTIT 147 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 147 (232)
.+++..+.+...+..++...+......+..||.. -+..+.....++.-..+..........++....+..+......+
T Consensus 292 fg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 292 FGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVT 371 (451)
T ss_pred cCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhH
Confidence 4588889898888888888888888888888877 66677777777777777777777777777777777777777778
Q ss_pred hhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 148 VATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 148 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
....+.....|+++||+..|+..+.+.++-.+||.+.|.+..+
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 8888899999999999999999999999999999999887654
No 241
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.09 E-value=0.00068 Score=53.87 Aligned_cols=142 Identities=15% Similarity=0.108 Sum_probs=101.8
Q ss_pred CCchhhH-HHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q 026854 72 SKDNSLY-VDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 72 ~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
.+..+.. -+.-+..-..++..++...+.|.+|.|++++++.+...+...++.+.++...+-+..++.|...+. ....+
T Consensus 37 ~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~ 115 (412)
T PF01770_consen 37 FTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYY 115 (412)
T ss_pred CCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHH
Confidence 5555543 222233445666778889999999999999999999999999998999998888888888887744 56677
Q ss_pred hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc--cchhHHHHHHHHHHHHHHHHHhcc
Q 026854 151 IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS--CHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 151 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+++=-..|+++--++.+......-+|..++..++-.+... ........+......++.+..+++
T Consensus 116 sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 116 SYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7777777887777888888888777777777777666552 234444444444445555555544
No 242
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.07 E-value=0.00032 Score=57.48 Aligned_cols=111 Identities=14% Similarity=0.012 Sum_probs=78.6
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhch--HH-----HHHHHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHH
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGR--KL-----SMVLMFVLACIFLLPLVFH---------QSAVVTTVLLFGVRM 140 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~gr--r~-----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~ 140 (232)
..+..++..+..++.+++.+++=.|.+| |. =+.++.++.+++.+.+... .+.+++....++..+
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 4566677777777778777777666633 21 1566777777776655431 255667777788888
Q ss_pred HHhhhhhhhhhccccccccchhhhhhHHHHHhh-hhhhchhHHHHHHH
Q 026854 141 CATGTITVATIYAPEIYPTSARTTGAGVASAVG-RVGGMVCPLVAVGL 187 (232)
Q Consensus 141 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~i~~~l 187 (232)
+.-...|+..+.++++.|++.||+.+|...... .+|..++..+.+..
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888889999999999999999999999986643 45555555555443
No 243
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.05 E-value=1.3e-05 Score=63.55 Aligned_cols=120 Identities=21% Similarity=0.207 Sum_probs=73.5
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH-------HHHHHHHHHHHH----HHHHHHh-hhhHHHHHHHHHHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRK-------LSMVLMFVLACI----FLLPLVF-HQSAVVTTVLLFGVR 139 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-------~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~g 139 (232)
.+.....+...+...++.+|.+++|.++||+-|+ +.--+...+.+. ...+... ..+.....+..++.|
T Consensus 280 ~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g 359 (493)
T KOG1330|consen 280 FDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVG 359 (493)
T ss_pred CccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3444556677778889999999999999995332 111111111111 1111111 222333333444444
Q ss_pred HHHhh-hhhhhhhccccccccchhhhhhHHHHHhhh-hhhchhHHHHHHHhhcc
Q 026854 140 MCATG-TITVATIYAPEIYPTSARTTGAGVASAVGR-VGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 140 ~~~~~-~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~i~~~l~~~~ 191 (232)
..... .++...-+..|+.|++.|.++.++...... .|..-+|++.|.+.|+.
T Consensus 360 ~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 360 ETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 44333 345566678899999999999999988775 56666677999998864
No 244
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.03 E-value=0.0003 Score=56.70 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=81.8
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhh---hchHHHHHHHHHHHHHHHHHHHh------------------hhhHHHHHHHH
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDK---IGRKLSMVLMFVLACIFLLPLVF------------------HQSAVVTTVLL 135 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr---~grr~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 135 (232)
........+++.+++....+.+.+| +||++.+.++..+..+..++... .++.....+..
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 3455556678888888888888876 68888888888887777766654 11344566777
Q ss_pred HHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH
Q 026854 136 FGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG 186 (232)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 186 (232)
++.|++-.......+.++++.. ++.|.++.++.-.-..+++.++-+..+.
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 8888888888899999999999 6678888888888777777666555553
No 245
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.02 E-value=6.5e-07 Score=73.94 Aligned_cols=144 Identities=12% Similarity=0.053 Sum_probs=2.5
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-------------------------
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ------------------------- 126 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------------------------- 126 (232)
.+.++.++..+...++..+..++..++.+|-.|-+.+-++.++++++.++..+.+
T Consensus 35 l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c 114 (539)
T PF03137_consen 35 LSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLC 114 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccc
Confidence 8999999999999999999999999999998777888888888888877665400
Q ss_pred -------------------------hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhH
Q 026854 127 -------------------------SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCP 181 (232)
Q Consensus 127 -------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 181 (232)
....+++..++.|++....+++..+|+=|..+++.-+.-.|+.+....+|-.+|=
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf 194 (539)
T PF03137_consen 115 DSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGF 194 (539)
T ss_dssp -------------------------------------SSS----------------------------------------
T ss_pred cccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHH
Confidence 0123445667788888888999999999999999988889998888888877776
Q ss_pred HHHHHHhhc---------------------cc-hhHHHHHHHHHHHHHHHHHhccc
Q 026854 182 LVAVGLVTS---------------------CH-LRLAVILFEVVFVLAIASSLLFP 215 (232)
Q Consensus 182 ~i~~~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~ 215 (232)
.+++...+. .| ||..|++.+.+.++..+..+.+.
T Consensus 195 ~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FP 250 (539)
T PF03137_consen 195 LLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFP 250 (539)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666655431 12 66667777777777777666664
No 246
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.99 E-value=0.00015 Score=57.08 Aligned_cols=145 Identities=12% Similarity=0.072 Sum_probs=102.6
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchH-HHHHHHHHHHHHHHHHHHhhhh--H-HHHHHHHHHHHHHHhhhhhhhh
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRK-LSMVLMFVLACIFLLPLVFHQS--A-VVTTVLLFGVRMCATGTITVAT 150 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~g~~~~~~~~~~~ 150 (232)
+-.+...++..+...+-+++.|.++|+.|+| +.+-....+..++...+.+.++ + +...++..+..++.........
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 3445666777788888889999999999955 5555555666666666666433 3 3444555666677777788899
Q ss_pred hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH--h----------------hccchhHHHHHHHHHHHHHHHHHh
Q 026854 151 IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL--V----------------TSCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 151 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l--~----------------~~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
+++.+..+++.-++..++.+..+++|+.+.-.+.-.. . +....+.++.+.++..++..+-.+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 9999999999889999999999998887665443111 1 122346677788888888877777
Q ss_pred ccccccc
Q 026854 213 LFPFETK 219 (232)
Q Consensus 213 ~~~~e~~ 219 (232)
+..++..
T Consensus 218 ~~v~~~~ 224 (438)
T COG2270 218 LNVHDAE 224 (438)
T ss_pred hcccccc
Confidence 7776654
No 247
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.96 E-value=7.4e-05 Score=59.33 Aligned_cols=109 Identities=11% Similarity=0.016 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh--h-------hHHHHHHHHHHHHHHHhhhhhhhhhccccccccc---hhhhhhHHHHHhh
Q 026854 106 LSMVLMFVLACIFLLPLVFH--Q-------SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTS---ARTTGAGVASAVG 173 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~ 173 (232)
++++++.++..++.+++..+ + +...+++...+.+++.|+.-|...++.+|.++++ .|.+...+.+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46677777777777774442 1 2245677777888999999999999999999765 4677888889999
Q ss_pred hhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 174 RVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 174 ~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
++|+.+++.+.+++.++.||...|.+.++..+++.+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888888777665544
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.87 E-value=3.2e-05 Score=61.32 Aligned_cols=154 Identities=11% Similarity=0.055 Sum_probs=99.8
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHh
Q 026854 21 TLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVD 100 (232)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 100 (232)
+..++++.+.++.+....+...+++-.-..+.|.|.+..| .+....+..-...-+..++.+++.|..+|
T Consensus 24 ~~~~ps~~~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lG-----------vphk~~S~iw~~gPi~G~~vQP~vG~~SD 92 (498)
T KOG0637|consen 24 DLSRPSRLRKLISVASIAAGVQFGWALELSYLTPYLQSLG-----------VPHKWSSIIWLCGPLSGLLVQPLVGSASD 92 (498)
T ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHHhccccHHHHHcC-----------CCcccccccccccccccceeccccccccc
Confidence 3333333366666666777777777777778888888777 44344344444455667788899999999
Q ss_pred h----hchHHHHH-HHHHHHHHHHHHHHhhhhH-----------------HHHHHHHHHHHHHHhhhhhhhhhccccccc
Q 026854 101 K----IGRKLSMV-LMFVLACIFLLPLVFHQSA-----------------VVTTVLLFGVRMCATGTITVATIYAPEIYP 158 (232)
Q Consensus 101 r----~grr~~~~-~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p 158 (232)
| +||||..+ .+.....++.+++.+..+. ...++...+.-+........+-+++.|+..
T Consensus 93 rc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~ 172 (498)
T KOG0637|consen 93 RCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLAR 172 (498)
T ss_pred ccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhcc
Confidence 6 78777655 4455556666666552221 112222233334455667888999999997
Q ss_pred cchhhh-hhHHHHHhhhhhhchhHHHHH
Q 026854 159 TSARTT-GAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 159 ~~~r~~-~~~~~~~~~~~g~~~~~~i~~ 185 (232)
.+++.+ +.+.......+|+.+|-..++
T Consensus 173 ~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 173 GDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred ChhhhhccchhHHHHHHhcceeeeeccc
Confidence 777777 888888888888877755554
No 249
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.87 E-value=0.00015 Score=61.19 Aligned_cols=146 Identities=12% Similarity=0.075 Sum_probs=114.5
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-------------------------
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQ------------------------- 126 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~------------------------- 126 (232)
++..+.+++...+-++..+...+..+..-|.-|-+.+-++.++++++.++..+.+
T Consensus 129 i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s 208 (735)
T KOG3626|consen 129 ISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLS 208 (735)
T ss_pred CCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccc
Confidence 7777888888888999999999999999998888888899999988888776510
Q ss_pred -----------------h---------HH-HHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhch
Q 026854 127 -----------------S---------AV-VTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 127 -----------------~---------~~-~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
. .+ .+++..++.|++....++...+|+=|...++.-..-.|+.+....+|-++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPai 288 (735)
T KOG3626|consen 209 FCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAI 288 (735)
T ss_pred hhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHH
Confidence 0 12 34456678888888889999999999998888888899988888888777
Q ss_pred hHHHHHHHhhcc-------------------chhHHHHHHHHHHHHHHHHHhccccc
Q 026854 180 CPLVAVGLVTSC-------------------HLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 180 ~~~i~~~l~~~~-------------------g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
|=.+++.+...+ .||..|++.+.+.++..+..+++.++
T Consensus 289 GfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 289 GFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred HHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 777777665321 16677888888888888877777443
No 250
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.87 E-value=0.0011 Score=53.47 Aligned_cols=125 Identities=14% Similarity=-0.003 Sum_probs=87.7
Q ss_pred HHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---
Q 026854 47 GAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLV--- 123 (232)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~--- 123 (232)
++...+..|++..| .+....+..-....+.++.+.++..++.+|+|..+.-+++......+..+..
T Consensus 276 sf~~lmt~yl~~~G-----------~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~ 344 (432)
T PF06963_consen 276 SFGGLMTAYLKSQG-----------YSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSF 344 (432)
T ss_pred cCcHHHHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHH
Confidence 34445566666656 8899999999999999999999999999999987776666654443333222
Q ss_pred -hhh------hHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHH
Q 026854 124 -FHQ------SAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 124 -~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
... +...+.....+.-++.=++--...-++.|..|+++||+..|.-+...++...+.-.
T Consensus 345 ~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 345 WAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred hcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 111 12223333344444444555677788999999999999999999998887755533
No 251
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.85 E-value=0.00011 Score=59.43 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=87.5
Q ss_pred CCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHH
Q 026854 70 DKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF----------HQSAVVTTVLLFGVR 139 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g 139 (232)
.+++....+....+..++.++|..+.....-+..-|+++..+.++..+..+.-.. .++.+....-.++..
T Consensus 250 p~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~ 329 (433)
T PF03092_consen 250 PHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEE 329 (433)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHH
Confidence 3477777777777788888888888887777778788877777666555443221 112222222233344
Q ss_pred HHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc
Q 026854 140 MCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH 192 (232)
Q Consensus 140 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g 192 (232)
+.....+-....+++|+.|+..-|+..++..+..++|..++..++..+.+..+
T Consensus 330 ~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444455566779999999999999999999999999999999998887665
No 252
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.83 E-value=0.00043 Score=56.26 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=101.4
Q ss_pred CCCCchhhHHHHHHHHhhhhhHHHHHH-HHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh
Q 026854 70 DKSKDNSLYVDVFITSFAELPGLILSA-IIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITV 148 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (232)
++.+..+.+...+.......++..+.. .+...+|-|+....|.....+......+.++.|..+....+.. ......+.
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~-~~~~~~pa 350 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVA-LAGIVFPA 350 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHH-hhcchhHH
Confidence 358888888888888888888888777 7788899888999999999999999999888888776665554 44567788
Q ss_pred hhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 149 ATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 149 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
..+..+-+.+++++|++.++...+..+.++++|.+.+.+...
T Consensus 351 ~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 351 IRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 899999999999999999999999999999999999877543
No 253
>PRK03612 spermidine synthase; Provisional
Probab=97.79 E-value=0.0099 Score=49.42 Aligned_cols=136 Identities=17% Similarity=0.088 Sum_probs=74.9
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHH-HHH-HHHHHHHHHhhh-----hHHHHHHHHHHHHHHHhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLM-FVL-ACIFLLPLVFHQ-----SAVVTTVLLFGVRMCATG 144 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~-~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~ 144 (232)
.+....+...+++..+..+|+.+++++.++.-|+...+-. ..+ ..++..++.... .....+...++.++..|.
T Consensus 47 ~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~ 126 (521)
T PRK03612 47 DSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGM 126 (521)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666667777788888888888888776443333221111 111 111111111111 111222333445566666
Q ss_pred hhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHh-hccchhHHHHHHHHHHHHHH
Q 026854 145 TITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLV-TSCHLRLAVILFEVVFVLAI 208 (232)
Q Consensus 145 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~-~~~g~~~~~~~~~~~~~~~~ 208 (232)
..|....+..+... +.-+...|-.+....+|+++|+++.+++. ...|.....++.+.+.++.+
T Consensus 127 ~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 127 EIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 66665555443322 12356688889999999999999988665 46676655555555444333
No 254
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.72 E-value=0.0019 Score=54.89 Aligned_cols=152 Identities=13% Similarity=0.137 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHh-hhhhHHHHHHHHHhhhc--hH
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSF-AELPGLILSAIIVDKIG--RK 105 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g--rr 105 (232)
+.+....+...+....+.++..|+|.|++.+. +.+...+........+ +..+|.+++|++..|+. .|
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qf----------g~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r 461 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQF----------GISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSAR 461 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHc----------CCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHH
Confidence 34555566666777788888999999997654 5777787777755544 45688889999999874 45
Q ss_pred HHHHHHHHHHHHHHHH---HHh----------------------h-h---------------------------------
Q 026854 106 LSMVLMFVLACIFLLP---LVF----------------------H-Q--------------------------------- 126 (232)
Q Consensus 106 ~~~~~~~~~~~~~~~~---~~~----------------------~-~--------------------------------- 126 (232)
....+.++...+..+. ..+ . .
T Consensus 462 ~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpCh 541 (735)
T KOG3626|consen 462 GAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCH 541 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhh
Confidence 5544444444443332 221 0 0
Q ss_pred ---------h----------------------------------HHHHHHHHHHHHHHHhhhhhhhhhccccccccchhh
Q 026854 127 ---------S----------------------------------AVVTTVLLFGVRMCATGTITVATIYAPEIYPTSART 163 (232)
Q Consensus 127 ---------~----------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~ 163 (232)
+ ...+++..++..+..+...+....++-...|+++|.
T Consensus 542 AGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks 621 (735)
T KOG3626|consen 542 AGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKS 621 (735)
T ss_pred hCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhch
Confidence 0 011222222223333333455666677889999999
Q ss_pred hhhHHHHHhhh-hhhchhHHHHHHHhhc
Q 026854 164 TGAGVASAVGR-VGGMVCPLVAVGLVTS 190 (232)
Q Consensus 164 ~~~~~~~~~~~-~g~~~~~~i~~~l~~~ 190 (232)
.++|+..++.+ +|.+-+|.+.|+++|.
T Consensus 622 ~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 622 FALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred hhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 99999988886 7888899999999985
No 255
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.72 E-value=0.009 Score=49.08 Aligned_cols=153 Identities=12% Similarity=0.092 Sum_probs=91.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHH-HHhhhhhHHHHHHHHHhhhc
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFI-TSFAELPGLILSAIIVDKIG 103 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~g 103 (232)
+..+++++.+.+..++..+.+...-..-..+.. .. .........=.. ..-+.++...+..+++||++
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvv----------t~--~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s 87 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLVV----------TA--QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLS 87 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEE----------ec--CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 455677777777777666654443222211110 00 122222222222 22245566778899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHh---------hh----------------------hHHHHHHHHHHHHHHHhhhhh-hhhh
Q 026854 104 RKLSMVLMFVLACIFLLPLVF---------HQ----------------------SAVVTTVLLFGVRMCATGTIT-VATI 151 (232)
Q Consensus 104 rr~~~~~~~~~~~~~~~~~~~---------~~----------------------~~~~~~~~~~~~g~~~~~~~~-~~~~ 151 (232)
|.+++-+..........+.++ .+ +.|...+..+..-.......+ ..|.
T Consensus 88 ~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~ 167 (491)
T PF03219_consen 88 REKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWG 167 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877666555544433332 00 112222222222233223333 5799
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 189 (232)
++.|.++.++-.+-.++....+++|.+++..+..++.+
T Consensus 168 fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 168 FANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888877
No 256
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.67 E-value=0.0023 Score=51.72 Aligned_cols=113 Identities=13% Similarity=0.041 Sum_probs=92.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
.+.........+......+++++.+.+.|++|.|+.+.++............+ .|.+..+....+.|++.+..+...-.
T Consensus 47 i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ 125 (461)
T KOG3098|consen 47 ISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGG 125 (461)
T ss_pred cCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccce
Confidence 34444455577788888999999999999999999999999887776666554 45667788888999999888899999
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
+++|..+++.+.+-.++.......+.++|..+..
T Consensus 126 ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 126 YLTSNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred ehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 9999999999999999999888877777755543
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.56 E-value=0.0063 Score=48.46 Aligned_cols=133 Identities=14% Similarity=0.124 Sum_probs=84.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcccccc
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIY 157 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 157 (232)
+.....-.+..++..+++.++.+|+.-+.=...+..++.++++...++++.+.-++...+.++..+..-.....+ +..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 445555566777888889999999874433445556777778888888888877777888887776665555554 4455
Q ss_pred ccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHhcccc
Q 026854 158 PTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPF 216 (232)
Q Consensus 158 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~ 216 (232)
|+. ..+-..+..+.++.+|+.....+.+ .| .+..+.....+..+..+..++.+|
T Consensus 141 ~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 141 GKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred Ccc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 542 2333344445667777777665555 44 455666666666555544444444
No 258
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.53 E-value=0.008 Score=50.38 Aligned_cols=177 Identities=14% Similarity=0.083 Sum_probs=114.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh-h
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLS-SGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK-I 102 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~ 102 (232)
...|+..........+....+++...-+-.|+ ...+ .+...+.-......-......+++++++|- +
T Consensus 33 ~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~-----------~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~ 101 (571)
T KOG1237|consen 33 TGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELH-----------ASGGGAANNVNAFGGTQFLLPLLGAFLADSFL 101 (571)
T ss_pred echhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhc-----------cchHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 34455444444445555566655532222222 2222 444555555555556667778899999997 5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhh----------------------h---HHHHHHHHHHHHHHHhhhhhhhhhcccccc
Q 026854 103 GRKLSMVLMFVLACIFLLPLVFHQ----------------------S---AVVTTVLLFGVRMCATGTITVATIYAPEIY 157 (232)
Q Consensus 103 grr~~~~~~~~~~~~~~~~~~~~~----------------------~---~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 157 (232)
||-+++.++..+..++..++.... + ...++....+..++.++.-+...++-+|-+
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf 181 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF 181 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence 899999998888887766554410 0 012333344445567777888899999998
Q ss_pred c---c-chhh--hhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 026854 158 P---T-SART--TGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 158 p---~-~~r~--~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
+ + +.+. .-+.+.+...+.|..++..+.-++.+..+|...|.+..+...++.++.+
T Consensus 182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 8 2 2222 5566777777899999988888888888998888887777766655443
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.37 E-value=0.006 Score=48.57 Aligned_cols=111 Identities=18% Similarity=0.199 Sum_probs=72.2
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLV---FHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
....+....+.++-+++.--...+ |+.|-+.+.+...+..+..+.-. +.++.|...+..+..|+..|..+...+.
T Consensus 281 ~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 281 DQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344455666666655554322111 33333332222222222222222 2567788888888899999999999999
Q ss_pred ccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 152 YAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 152 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
.+.|-.|+++|-.++|.....-.+|..++..++-++
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999988888888777776544
No 260
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.36 E-value=0.055 Score=43.84 Aligned_cols=138 Identities=11% Similarity=0.049 Sum_probs=76.9
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH----HHHHHH--h--hh----hHHHHHHH---HHHHHH
Q 026854 76 SLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI----FLLPLV--F--HQ----SAVVTTVL---LFGVRM 140 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~----~~~~~~--~--~~----~~~~~~~~---~~~~g~ 140 (232)
-.......-.+..++.++..|...||..|.+....+.+..=+ +...+. + .. +.+....+ ..+.+
T Consensus 39 ~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~- 117 (432)
T PF06963_consen 39 PVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLG- 117 (432)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHH-
Confidence 344555556677888889999999999998876555433222 222211 1 11 11221111 11111
Q ss_pred HHhhhhhhhh--hcccccc------ccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHHHh
Q 026854 141 CATGTITVAT--IYAPEIY------PTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 212 (232)
Q Consensus 141 ~~~~~~~~~~--~~~~e~~------p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 212 (232)
+..-..+... +.=-|+. +++...+..+...-+--+...++|.+.|.+.+..+......+.++..++...+=+
T Consensus 118 ~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 118 AIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 1111112222 2222332 2333444455555555588999999999999988888888777777777665544
Q ss_pred cc
Q 026854 213 LF 214 (232)
Q Consensus 213 ~~ 214 (232)
++
T Consensus 198 ~~ 199 (432)
T PF06963_consen 198 FL 199 (432)
T ss_pred HH
Confidence 33
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.36 E-value=0.0029 Score=49.56 Aligned_cols=146 Identities=18% Similarity=0.131 Sum_probs=76.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHh----
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVD---- 100 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---- 100 (232)
+.-++.++.+.+++..+....-... .+|.+++.-+ .+-++.+....... -.---+++..+.|
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~-----------vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~ 92 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKG-----------VSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYS 92 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCC-----------cchhhhhhhhhhhh--HHHHHHHHHhhhHHHHH
Confidence 3455677777788887776644444 7898886443 55555443332221 1122468888999
Q ss_pred -hhchHHHHH-HHHHHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhH
Q 026854 101 -KIGRKLSMV-LMFVLACIFLLPLVFH-----------QSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAG 167 (232)
Q Consensus 101 -r~grr~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 167 (232)
|+||||.-+ -+..+.+..+..+... ++........++.-+....--...-.+.-.+..+++-|.+..
T Consensus 93 k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST 172 (510)
T KOG3574|consen 93 KRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAST 172 (510)
T ss_pred HhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhH
Confidence 999887543 3444445555544441 122222222223322222222344555555666666665554
Q ss_pred HHHHhhhhhhchhHHHH
Q 026854 168 VASAVGRVGGMVCPLVA 184 (232)
Q Consensus 168 ~~~~~~~~g~~~~~~i~ 184 (232)
-.....+.|.+++-.+.
T Consensus 173 ~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 173 CQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHhhhHHhhccee
Confidence 44444455555554443
No 262
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.32 E-value=5.1e-05 Score=62.93 Aligned_cols=152 Identities=17% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHh-hhhhHHHHHHHHHhhhc--hHH
Q 026854 30 TTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSF-AELPGLILSAIIVDKIG--RKL 106 (232)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g--rr~ 106 (232)
.++...+..........++..+.|.|++.+. +.+.+++.+......+ +..+|.+++|++..|+. .|.
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF----------~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~ 375 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQF----------GLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARG 375 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHH
Confidence 3444444555566667788889999997654 4677776666655444 67789999999999974 455
Q ss_pred HHHHHHHHHHHHHHH---HHh-------------hh----------------------------------h----HHHHH
Q 026854 107 SMVLMFVLACIFLLP---LVF-------------HQ----------------------------------S----AVVTT 132 (232)
Q Consensus 107 ~~~~~~~~~~~~~~~---~~~-------------~~----------------------------------~----~~~~~ 132 (232)
.+....+...+..+. ..+ .. + ...+.
T Consensus 376 ~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl 455 (539)
T PF03137_consen 376 AAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFL 455 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHH
Confidence 544444444433332 111 00 0 01111
Q ss_pred HHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhh-hhhchhHHHHHHHhhcc
Q 026854 133 VLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGR-VGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 133 ~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~i~~~l~~~~ 191 (232)
+..++..+..+..........-...|+++|+.|.|+.....+ +|.+-+|.+.|.++|..
T Consensus 456 ~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 456 ILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 222222223333334444555677899999999999998886 78889999999999864
No 263
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.24 E-value=0.015 Score=47.20 Aligned_cols=141 Identities=15% Similarity=-0.018 Sum_probs=93.7
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchH-------HHHHHHHHHHHHHHHHHHh-----h-----hhHHHHHHHHHHHH
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRK-------LSMVLMFVLACIFLLPLVF-----H-----QSAVVTTVLLFGVR 139 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr-------~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~g 139 (232)
..+..++..+.-++.+++..++..|.++| .-+-++..+++.+.+.+.. . .+.++++...++..
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35666777777778888888888775544 1233444444444444433 1 24567777788888
Q ss_pred HHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHH------HhhccchhHHHHHHHHHHHHHHHHHhc
Q 026854 140 MCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVG------LVTSCHLRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 140 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~------l~~~~g~~~~~~~~~~~~~~~~~~~~~ 213 (232)
++.-...|+..+++....|++..+..+++.......++.++..+.+. ..+.......|+..+....+..+....
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999998877777776666666552 223334445666666666665555544
Q ss_pred cccc
Q 026854 214 FPFE 217 (232)
Q Consensus 214 ~~~e 217 (232)
..|+
T Consensus 486 ~~~~ 489 (498)
T COG3104 486 LSPK 489 (498)
T ss_pred hhHH
Confidence 4343
No 264
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.0014 Score=48.97 Aligned_cols=152 Identities=12% Similarity=-0.045 Sum_probs=86.0
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATI 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 151 (232)
+...+++.......-..++...+.|.++||-|||+.-+.-++-..++++.- .++++-.+.+.+.+.|+.....++..-+
T Consensus 69 FgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK-hSpqYkVLmVGR~LGGiaTsLLFSaFEs 147 (454)
T KOG4332|consen 69 FGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK-HSPQYKVLMVGRVLGGIATSLLFSAFES 147 (454)
T ss_pred ccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh-cCCceEEEeehhhhhhHHHHHHHHHHHH
Confidence 556666666655555667777888999999999986544443333333221 2455566778888888877666665554
Q ss_pred c-cccccc-----cchhhhhhHHHHHhh-hhhhchhHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHhcccccccCCC
Q 026854 152 Y-APEIYP-----TSARTTGAGVASAVG-RVGGMVCPLVAVGLVTSC--HLRLAVILFEVVFVLAIASSLLFPFETKGRE 222 (232)
Q Consensus 152 ~-~~e~~p-----~~~r~~~~~~~~~~~-~~g~~~~~~i~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 222 (232)
+ +.|.-. .+--....+=...++ .+-++++...+-.+.+.+ |...+|-..+.+..++..+..--..|.-+++
T Consensus 148 WliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdp 227 (454)
T KOG4332|consen 148 WLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDP 227 (454)
T ss_pred HHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCCh
Confidence 3 455532 221112222222222 244444444445555544 5556666666666666655555556666554
Q ss_pred ch
Q 026854 223 LK 224 (232)
Q Consensus 223 ~~ 224 (232)
.+
T Consensus 228 s~ 229 (454)
T KOG4332|consen 228 SE 229 (454)
T ss_pred hh
Confidence 43
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.85 E-value=0.2 Score=40.97 Aligned_cols=154 Identities=13% Similarity=0.101 Sum_probs=96.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHh-hhhhHHHHHHHHHhhhc
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSF-AELPGLILSAIIVDKIG 103 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g 103 (232)
+..++.++...+..++..+.++.+-..-..+... ...+......=...-+ ++++..++..++.++..
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~------------~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt 90 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRSLKDSLVVT------------RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILT 90 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEee------------cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcC
Confidence 4456777777777777776655553333322211 1223333444444444 56778888899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHh---------hhh-----------------------HHHHHHHHHHHHHHHhhhhh-hhh
Q 026854 104 RKLSMVLMFVLACIFLLPLVF---------HQS-----------------------AVVTTVLLFGVRMCATGTIT-VAT 150 (232)
Q Consensus 104 rr~~~~~~~~~~~~~~~~~~~---------~~~-----------------------~~~~~~~~~~~g~~~~~~~~-~~~ 150 (232)
|.+++-+.........++.++ .++ .|...+.....-.......+ ..|
T Consensus 91 ~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw 170 (509)
T COG3202 91 REKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHH
Confidence 988876665555544444433 011 12222333333333333333 678
Q ss_pred hccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 151 IYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 151 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
....|.+..++-.+-.++.+...+++..++..+..++.++
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8899999999999999999999999999999888888764
No 266
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.71 E-value=0.00096 Score=54.36 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHH-H
Q 026854 38 FFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLA-C 116 (232)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~-~ 116 (232)
++......-.+...++.|.+.+| .+..+.+..+..--+..+++.+++|+++||+.+|+.++++..+. .
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQLG-----------l~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQLG-----------LNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred eeeeeecccccchHHHHHHHHcC-----------CCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 33333344455667788887777 99999999999999999999999999999998766666555544 4
Q ss_pred HHHHHHHh
Q 026854 117 IFLLPLVF 124 (232)
Q Consensus 117 ~~~~~~~~ 124 (232)
.+.+++.+
T Consensus 89 ~a~fll~f 96 (618)
T KOG3762|consen 89 TATFLLVF 96 (618)
T ss_pred HHHHheee
Confidence 44444444
No 267
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.67 E-value=0.022 Score=46.50 Aligned_cols=102 Identities=9% Similarity=-0.032 Sum_probs=73.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchH--HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcccc
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRK--LSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPE 155 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e 155 (232)
+..-++..+.+.++++..|++-.++.+- ..+-+..++.+...+++...++.|..++..++.+.......++...-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666777888899987777542 33334445555556666778899999999888888888888888888888
Q ss_pred ccccchhhhhhHHHHHhhhhhhch
Q 026854 156 IYPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 156 ~~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
....+.-|...|+.++..-+-+.+
T Consensus 381 ~L~~~~~aLvFGiNtfvAl~LQti 404 (511)
T TIGR00806 381 SLSKELCALVFGINTFVATALKTI 404 (511)
T ss_pred HhcccceEEEEecHHHHHHHHHHh
Confidence 887777788888877766544433
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.42 E-value=0.028 Score=45.70 Aligned_cols=108 Identities=9% Similarity=0.098 Sum_probs=69.3
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchH-HHHHHHHHHHHHHHHHHHh------------hhhHHHHHHHHHHHHHHHh
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRK-LSMVLMFVLACIFLLPLVF------------HQSAVVTTVLLFGVRMCAT 143 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr-~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~ 143 (232)
.-....+++++..+|..+..+.. .-++| +.+.+..+.=.+..-+..+ .++.+...+..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34566677888888887665431 11222 1222222222222222111 1355667777889999999
Q ss_pred hhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHH
Q 026854 144 GTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAV 185 (232)
Q Consensus 144 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 185 (232)
...+....+.++..++++|-.+..+......+|-.+|..+.-
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 989999999999999999988888887777777777766543
No 269
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.39 E-value=0.0024 Score=51.91 Aligned_cols=64 Identities=19% Similarity=0.228 Sum_probs=50.0
Q ss_pred hhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 026854 145 TITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 208 (232)
Q Consensus 145 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 208 (232)
......+..+|...++.+++..++.......+..++|.+........|.+....+.....++..
T Consensus 405 ~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 405 ISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVA 468 (488)
T ss_pred ccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHH
Confidence 3455677788999999999999999999999999999999988888887755555444444333
No 270
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.15 E-value=0.24 Score=39.83 Aligned_cols=126 Identities=12% Similarity=0.034 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH--HHHHHHHH
Q 026854 40 ANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMV--LMFVLACI 117 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~--~~~~~~~~ 117 (232)
....+++....|...+-++... .+....--|..-....+.+.++++..|++..++.+-.-+. ....+.+.
T Consensus 258 ~atcgy~qv~nYvQ~LW~~v~~--------~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~ 329 (412)
T PF01770_consen 258 FATCGYYQVINYVQSLWDTVPP--------SDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAG 329 (412)
T ss_pred HHHhHHHHHHHHHHHHHHhcCC--------CCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHH
Confidence 3444555555565555544310 0122333356666677778888899999977777644333 34445556
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhh
Q 026854 118 FLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVG 173 (232)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 173 (232)
..+.+...++.+..++..++.+.......++...-++.....+.-|..+|+.....
T Consensus 330 ~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 330 LLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHH
Confidence 66667778888888888887777776666776666666666666566666655544
No 271
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.70 E-value=0.45 Score=36.98 Aligned_cols=115 Identities=12% Similarity=0.166 Sum_probs=69.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 026854 25 RKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
+...|.++.+..........+.+..........+.+ + .......+.-+.++++.+.+.+++|-
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg---------------~--~sl~~~y~~l~~s~m~~~~~Ir~~g~ 87 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLGLQNLQTSVNYDLG---------------T--VSLGALYLSLIDSSMFMPLLIRFLGT 87 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc---------------c--chhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 345566666666666666666666555444443333 1 11222344555667777799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhcccccc
Q 026854 105 KLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIY 157 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~ 157 (232)
|+++.++..........- .-+.+..++......|++.+..++.--++++++-
T Consensus 88 K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 88 KWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 999888776654432221 2334445556667777777777766666666664
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.60 E-value=0.21 Score=37.33 Aligned_cols=97 Identities=13% Similarity=0.037 Sum_probs=45.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHhh-hchHHHHH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHHHhhhhhhh
Q 026854 80 DVFITSFAELPGLILSAIIVDK-IGRKLSMV----LMFVLACIFLLPLVF-H----QSAVVTTVLLFGVRMCATGTITVA 149 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~----~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~~~~~~~~~~ 149 (232)
...+...+..+|.+..|..... +.||+.+. .+.+...++.+.... . .+...+.++.++.|.+.=+..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3344444555666666766654 45555433 222222333222211 1 123445566666666665555555
Q ss_pred hhccccc--cccchhhhhhHHHHHhhhhh
Q 026854 150 TIYAPEI--YPTSARTTGAGVASAVGRVG 176 (232)
Q Consensus 150 ~~~~~e~--~p~~~r~~~~~~~~~~~~~g 176 (232)
.-..-|. ..|+.-|.-.|+...++.+.
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 5444443 23344455555554444443
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.27 E-value=0.071 Score=43.05 Aligned_cols=167 Identities=9% Similarity=-0.065 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C--CCCCccc----cccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhh
Q 026854 29 RTTVLLWVLFFANAFSYYGAVLLTSKLSSG-D--SKCGSKV----LHADKSKDNSLYVDVFITSFAELPGLILSAIIVDK 101 (232)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 101 (232)
|....+++...++.+..+.+..|...+.-+ . |+++-++ .+.++-....-.+-..+..+...+.+...-++.||
T Consensus 279 r~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~ 358 (498)
T KOG0637|consen 279 RPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRK 358 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555566666666666666555555422 1 2222111 00111112223355667777888889999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH---------------------hhhhhhhhhccccccccc
Q 026854 102 IGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCA---------------------TGTITVATIYAPEIYPTS 160 (232)
Q Consensus 102 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------------------~~~~~~~~~~~~e~~p~~ 160 (232)
+|-|+.++.+.....++.-......+.+.....+...|+-. ...+.+.++..+......
T Consensus 359 ~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~s 438 (498)
T KOG0637|consen 359 FGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNS 438 (498)
T ss_pred cCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCc
Confidence 99554444444323333333332222222222222222111 112223344433333232
Q ss_pred hh--hhhhHHHHHhhhhhhchhHHHHHHHhhccchhH
Q 026854 161 AR--TTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRL 195 (232)
Q Consensus 161 ~r--~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~ 195 (232)
.| |...|+.+....+.+++.....|.+.+..|...
T Consensus 439 g~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~ 475 (498)
T KOG0637|consen 439 GLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGN 475 (498)
T ss_pred cCCCCceeeeeeeeeeehhheeeccccchhhhcCCcc
Confidence 33 444555566666777777777777777765443
No 274
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.62 E-value=0.29 Score=38.91 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=47.5
Q ss_pred HHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccch
Q 026854 136 FGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHL 193 (232)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~ 193 (232)
.+.+.+....+....+..+++.|+..-|+-+.+.+...++|+-.-..+..++.|..++
T Consensus 377 ~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 377 AFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 4444555555666777889999999999999999999999999999999999886543
No 275
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.85 E-value=0.018 Score=44.58 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=3.7
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhh-chHHHHHHHHHHHHHH---HHHHH----------hhhhHHHHHHHHHHHHHHHhhh
Q 026854 80 DVFITSFAELPGLILSAIIVDKI-GRKLSMVLMFVLACIF---LLPLV----------FHQSAVVTTVLLFGVRMCATGT 145 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~g~~~~~~ 145 (232)
....++++..+|..+.++..=+- .+|++. +..+.=.+. .+... ..++.+...+..++.++..|..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 45568899999999888743221 244333 322222211 11111 1234456667788889999988
Q ss_pred hhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 146 ITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 146 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
.+....+.++..++++|..+-.+......+|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999888877777777777776666554
No 276
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.73 E-value=0.55 Score=35.66 Aligned_cols=133 Identities=12% Similarity=0.009 Sum_probs=73.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchH--HHHHHHHHHHHHHHHHHHh----h---hhHHHHHHHHHHHHHHHhhhhhh
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRK--LSMVLMFVLACIFLLPLVF----H---QSAVVTTVLLFGVRMCATGTITV 148 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~g~~~~~~~~~ 148 (232)
+...+.+.++.++|+-+..++..|-..| ..+.+...+......+... + .++..-.+..++.-.+.|.++|.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPS 364 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPS 364 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchH
Confidence 4556666777777777777776664433 3444444444443333222 1 12223345555666778888999
Q ss_pred hhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 026854 149 ATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 149 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
..-+-++..|.+.|++.+.+...--++..-++-+..-.-....+-+..|-+...+..++.+.
T Consensus 365 imkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 365 IMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 99999999999999987766544433322222111000001123445566666665555443
No 277
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.39 E-value=0.14 Score=39.40 Aligned_cols=180 Identities=13% Similarity=0.174 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCccc---cccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhh--ch
Q 026854 31 TVLLWVLFFANAFSYYGAVLLTSKLSSG-DSKCGSKV---LHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKI--GR 104 (232)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--gr 104 (232)
....++...|++..|..+..-...+..+ .++.++.. ....+-...+.+.+...-.+...+..+......||+ |.
T Consensus 14 ~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~ 93 (409)
T KOG3880|consen 14 AVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGF 93 (409)
T ss_pred chHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccch
Confidence 3444555666776655443333333322 22222221 122222333345555555667778888889999986 55
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 105 KLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 105 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
|.. +...+.+.+.++.+++++.+.-+....+..++.|.. -+.+.-.+..+|+..- .++ ......++.+|..-.
T Consensus 94 Ri~--~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlG-EiTFL~lss~Y~~~~i---~~W-SSGTGgAGliGa~SY 166 (409)
T KOG3880|consen 94 RIA--LVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLG-EITFLALSSRYPSIVI---AGW-SSGTGGAGLIGASSY 166 (409)
T ss_pred HHH--HHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcc-eeehhhhhccCCCcee---ccc-cCCCCcchhhhhhHH
Confidence 533 344556666667777777777666666666655433 3333334444443321 111 222223444555544
Q ss_pred HHHhh--ccchhHHHHHHHHHHHHHHHHHhccccc
Q 026854 185 VGLVT--SCHLRLAVILFEVVFVLAIASSLLFPFE 217 (232)
Q Consensus 185 ~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~e 217 (232)
..+.+ ....+.+.++...+.++.+...++.+++
T Consensus 167 a~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 167 AFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred HHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 44444 3356778888887777776666666543
No 278
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.27 E-value=0.53 Score=38.77 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=21.1
Q ss_pred hhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 148 VATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 148 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
..-.+.-.+..++.++.|..-.....+.|-+++-.++-.+
T Consensus 138 AVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 138 AVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred eeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 3444555556677777654443333456666555444433
No 279
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.18 E-value=3.6 Score=34.21 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=45.3
Q ss_pred HHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 136 FGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
++..+.....+....+.-+.+.+|..-|+-+.+.|+..|+|+-.-..+.-++.|.+
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 34444555556677778889999999999999999999999999988888887753
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.89 E-value=0.33 Score=38.84 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=63.6
Q ss_pred HHHHHH-HHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---------hhhhHHHHHHHHHHHHHHHhhhhh
Q 026854 78 YVDVFI-TSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLV---------FHQSAVVTTVLLFGVRMCATGTIT 147 (232)
Q Consensus 78 ~~~~~~-~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~ 147 (232)
...... .++...+|.+...++-++= ||...+. ..+=.+..-++. ...+.++......+.|+..|-..+
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~-v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIP-VLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCCC-CceehHH-HHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 344444 6788888877666665553 3333222 222222111111 134567778888899999999999
Q ss_pred hhhhccccccccchhhhhhHHHHHhhhhhhchhHH
Q 026854 148 VATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPL 182 (232)
Q Consensus 148 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 182 (232)
+...+.++-.|++++-.+-.+....-..|-..|..
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999888766555555554555544443
No 281
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=92.73 E-value=0.71 Score=36.32 Aligned_cols=162 Identities=14% Similarity=0.051 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccccCCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH--HHHHHHHHHHH
Q 026854 40 ANAFSYYGAVLLTSKLSSGDSKCGSKVLHADKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKL--SMVLMFVLACI 117 (232)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~--~~~~~~~~~~~ 117 (232)
....++|....|...+-++.. ++ ....--+..=.+..+.+.++.+..|.+.-++.|.. ++.++....+.
T Consensus 245 l~scg~~QV~nY~Q~LW~~~~-~~--------~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~ag 315 (433)
T KOG3810|consen 245 LASCGYYQVTNYTQILWKEVA-PN--------PANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAG 315 (433)
T ss_pred HhhchhHHHHHHHHHHHHhhC-CC--------chhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhh
Confidence 344455556556555554332 11 11111233334455667788888898887777653 34444455555
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccc-----
Q 026854 118 FLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCH----- 192 (232)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g----- 192 (232)
..+.+...++.|..++..++.........++...-+++....+.-|..+|+..++.-+-..+...+ ..|..|
T Consensus 316 llf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~i 392 (433)
T KOG3810|consen 316 LLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDI 392 (433)
T ss_pred hhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCc
Confidence 555666677888888888777777767777777777777777777777777666553333222221 223211
Q ss_pred ------hhHHHHHHHHHHHHHHHHHhc
Q 026854 193 ------LRLAVILFEVVFVLAIASSLL 213 (232)
Q Consensus 193 ------~~~~~~~~~~~~~~~~~~~~~ 213 (232)
+...|.+.+++.++.....+.
T Consensus 393 r~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 393 RTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred ceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 223466666666666554443
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.35 E-value=8.4 Score=31.15 Aligned_cols=28 Identities=4% Similarity=-0.024 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 026854 32 VLLWVLFFANAFSYYGAVLLTSKLSSGD 59 (232)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (232)
+..++...+....+..+..-.+.+.++.
T Consensus 21 ~i~~llGiG~LlpWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 21 LIFLLLGIGTLLPWNMFITASDYYYYRF 48 (406)
T ss_pred HHHHHHhcccccchHhhhccHHHHHhhc
Confidence 3444444555556666666666666544
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.81 E-value=12 Score=30.78 Aligned_cols=32 Identities=13% Similarity=0.006 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccccc
Q 026854 128 AVVTTVLLFGVRMCATGTITVATIYAPEIYPTS 160 (232)
Q Consensus 128 ~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~ 160 (232)
.+...+..++.|++.+...+....+.+ .+|++
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 344445556667777666677777666 55554
No 284
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=88.30 E-value=1.2 Score=35.15 Aligned_cols=99 Identities=22% Similarity=0.146 Sum_probs=74.5
Q ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHH
Q 026854 90 PGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVA 169 (232)
Q Consensus 90 ~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 169 (232)
+.-++.=.+.|...-|++++.-.+.......++.+.++.+.+-+.-++.|... +.....++++=+..+++++-++.|.+
T Consensus 57 v~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~t-AaEIAYysYIYs~Vd~~~Yqrvt~y~ 135 (433)
T KOG3810|consen 57 VGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPAT-AAEIAYYSYIYSKVDPEMYKRVTGYC 135 (433)
T ss_pred HHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHH-HHHHhhhheeeeecCHHHHHHHHHHh
Confidence 44445557889988898888877777777777777888887777777776654 34566788888888999999999998
Q ss_pred HHhhhhhhchhHHHHHHHhh
Q 026854 170 SAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 170 ~~~~~~g~~~~~~i~~~l~~ 189 (232)
....-.|-..+...+-.+.+
T Consensus 136 RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 136 RAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred HHHHHHHhHHHhHHHHHHhh
Confidence 88877777777666665554
No 285
>PRK10263 DNA translocase FtsK; Provisional
Probab=87.62 E-value=25 Score=33.11 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=13.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchH
Q 026854 83 ITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 83 ~~~~~~~~~~~~~g~l~dr~grr 105 (232)
+.+.++.+|..+...+..-+|--
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHH
Confidence 34566666666666666666643
No 286
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.26 E-value=9.4 Score=24.34 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=20.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhh-chHHHHHHHH
Q 026854 81 VFITSFAELPGLILSAIIVDKI-GRKLSMVLMF 112 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~ 112 (232)
.+.-.++.++.....||+.||+ |-++..++.+
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3344566666677789999996 4555444433
No 287
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=82.07 E-value=7 Score=26.80 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=26.0
Q ss_pred hhhhhhhhccccccccchhhhhhHHHHHhhhhhhc
Q 026854 144 GTITVATIYAPEIYPTSARTTGAGVASAVGRVGGM 178 (232)
Q Consensus 144 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 178 (232)
+..++.|..++-...++..|+..|+-..-.+++-+
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 44567777788778888789999988777666543
No 288
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=80.69 E-value=19 Score=30.39 Aligned_cols=24 Identities=13% Similarity=0.232 Sum_probs=12.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhch
Q 026854 81 VFITSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~g~l~dr~gr 104 (232)
.....+.+.+++..++++-..+|.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCC
Confidence 334444555555555555555553
No 289
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=80.45 E-value=13 Score=23.99 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=26.5
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 77 LYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
.+.......++..++..+.+.+.|..|.+..+.+......+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 34555566677777778888888877766655554444333
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.71 E-value=10 Score=24.18 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=26.6
Q ss_pred ccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 158 PTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 158 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
.++.++.+.++-...-.+++++.....||+.+++
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456777788877777788888888889999876
No 291
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=78.33 E-value=29 Score=26.85 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=12.8
Q ss_pred hchHHHHHHHHHHHHHHHHHHH
Q 026854 102 IGRKLSMVLMFVLACIFLLPLV 123 (232)
Q Consensus 102 ~grr~~~~~~~~~~~~~~~~~~ 123 (232)
||.||.=+++....++..+...
T Consensus 84 fGy~R~eiLaa~~nav~Li~~s 105 (296)
T COG1230 84 FGYKRLEILAAFLNALLLIVVS 105 (296)
T ss_pred ccHhHHHHHHHHHHHHHHHHHH
Confidence 6767766666665555544433
No 292
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=76.95 E-value=43 Score=28.00 Aligned_cols=71 Identities=13% Similarity=0.071 Sum_probs=48.8
Q ss_pred HHHHHHHhhhhhhhhhcccccccc-chhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHH
Q 026854 136 FGVRMCATGTITVATIYAPEIYPT-SARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 206 (232)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~ 206 (232)
++.++.........-..+.|.+|. ++|+.-+|-.....++...+...+.+.+.+..||.....+...+.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 334444444555555667777764 56788888887777777766667779999999998776666555544
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=76.41 E-value=11 Score=29.48 Aligned_cols=63 Identities=13% Similarity=0.069 Sum_probs=48.5
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 122 LVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 122 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
..+.++.+...+..+.-|...|+.+..++--+.+-.++++|-.+++.....-.+|..++..++
T Consensus 336 ~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 336 YWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 344778888888888888888888888877788878889999998888777777766665554
No 294
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=75.13 E-value=60 Score=28.79 Aligned_cols=27 Identities=19% Similarity=0.444 Sum_probs=20.4
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 026854 76 SLYVDVFITSFAELPGLILSAIIVDKI 102 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~l~dr~ 102 (232)
+..+...+..+.+++++++.-.+.||+
T Consensus 158 ~v~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 158 EVLLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344555666777888888999999996
No 295
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=73.22 E-value=49 Score=26.94 Aligned_cols=129 Identities=15% Similarity=0.111 Sum_probs=64.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHH------HHHHh-hh-----hHHHHHHHHHHH-HHHHh-
Q 026854 78 YVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFL------LPLVF-HQ-----SAVVTTVLLFGV-RMCAT- 143 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~------~~~~~-~~-----~~~~~~~~~~~~-g~~~~- 143 (232)
.....+-+....+...+.|...|+..|+|++.....+.=++. +...+ .+ +..++..+.++. .++.-
T Consensus 66 Avyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~ 145 (503)
T KOG2601|consen 66 AVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIA 145 (503)
T ss_pred HHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHH
Confidence 333444445556667778889999999987765544322111 11111 11 222222222221 11111
Q ss_pred hhhhhhhhcc--ccc----cccchhhhhh---HHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHH
Q 026854 144 GTITVATIYA--PEI----YPTSARTTGA---GVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVL 206 (232)
Q Consensus 144 ~~~~~~~~~~--~e~----~p~~~r~~~~---~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~ 206 (232)
-......... -|+ ...+.++... +.....-.....+.|.+.|.+....+.+..-..+++...+
T Consensus 146 ~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 146 VLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred HHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 1112222221 122 1223333333 4444445567789999999998887777655555555554
No 296
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=72.31 E-value=7.8 Score=24.66 Aligned_cols=50 Identities=8% Similarity=-0.080 Sum_probs=37.8
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 124 (232)
...+-....++-..++.++++++..|+..+-+.=.++..++.++...+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 45567778888888999999999999988766666777666666555443
No 297
>PF12832 MFS_1_like: MFS_1 like family
Probab=72.00 E-value=18 Score=21.47 Aligned_cols=58 Identities=14% Similarity=0.138 Sum_probs=37.5
Q ss_pred HhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHH
Q 026854 142 ATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEV 202 (232)
Q Consensus 142 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~ 202 (232)
.+...|-...+..+. .....-.|+......+...+++.+.|.+.|..+.+........
T Consensus 16 ~g~~~Pfl~~~~~~~---Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 16 LGCLYPFLPLYLKQL---GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHhhhhHhhhhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 334444444444432 2233447777778888889999999999999887665554433
No 298
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=71.37 E-value=24 Score=22.59 Aligned_cols=19 Identities=5% Similarity=0.419 Sum_probs=11.4
Q ss_pred hhhchHHHHHHHHHHHHHH
Q 026854 100 DKIGRKLSMVLMFVLACIF 118 (232)
Q Consensus 100 dr~grr~~~~~~~~~~~~~ 118 (232)
+|+.+|+.........++.
T Consensus 84 er~~~~~~~a~~l~~~Gv~ 102 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGVI 102 (113)
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 6788887765544444443
No 299
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=66.11 E-value=69 Score=25.85 Aligned_cols=114 Identities=13% Similarity=0.020 Sum_probs=56.0
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhc-hHHHH---HHHHHHH---HHHHHHHHh--hhhHHHHHHHHHHHHHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIG-RKLSM---VLMFVLA---CIFLLPLVF--HQSAVVTTVLLFGVRMCA 142 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~~---~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~g~~~ 142 (232)
....+.+.+...+-...-+|+.+.-++.|.-- -|.+. +.+.+.- .+..+.+.. .++.+.+++.....|...
T Consensus 40 ~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV 119 (508)
T COG4262 40 GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV 119 (508)
T ss_pred CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 33445555565555555666666655555321 22111 1121111 111111222 346677777888888888
Q ss_pred hhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 143 TGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 143 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
|.-.|....+...-. .+. ....+.....-.+|+..+....+++
T Consensus 120 G~EiPL~mrml~~r~-a~~-k~~~s~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 120 GAEIPLLMRMLQRRQ-AKA-KDLGSRVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred hcchHHHHHHHHHHH-HHH-HhhhhhhhhhHhhhhhhHHHHHHHH
Confidence 888888777765511 111 1112222233456666666555544
No 300
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=66.06 E-value=80 Score=26.60 Aligned_cols=71 Identities=11% Similarity=0.160 Sum_probs=45.0
Q ss_pred HHHHHHhhhhhhhhhcccccccc-chhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHHHH
Q 026854 137 GVRMCATGTITVATIYAPEIYPT-SARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 207 (232)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~ 207 (232)
..++.........-..+.|.+|. +.+..-+|-.....++-..+...+++.+.+..||.....+..++.++.
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 33444444445555566677765 455666666666666666666678888999999987766655554443
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=64.62 E-value=6.7 Score=29.85 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=26.5
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHH---------HHHhhhchHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSA---------IIVDKIGRKLS 107 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g---------~l~dr~grr~~ 107 (232)
.++.+....+....+...+..++.| +-.||+|||+.
T Consensus 49 lsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 49 LSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred CCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 6666667777777777777777664 56789998864
No 302
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=64.20 E-value=7.8 Score=32.46 Aligned_cols=31 Identities=3% Similarity=-0.167 Sum_probs=19.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKI 102 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 102 (232)
.+++.-+...+...+..++..+++|+.+-|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4444445555566666667777777777764
No 303
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=63.19 E-value=49 Score=23.62 Aligned_cols=21 Identities=14% Similarity=0.226 Sum_probs=17.4
Q ss_pred HHhhhhhHHHHHHHHHhhhch
Q 026854 84 TSFAELPGLILSAIIVDKIGR 104 (232)
Q Consensus 84 ~~~~~~~~~~~~g~l~dr~gr 104 (232)
+-++..+++.+.|++.||..+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 446677889999999999875
No 304
>COG2119 Predicted membrane protein [Function unknown]
Probab=60.82 E-value=49 Score=23.58 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=29.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 026854 83 ITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLP 121 (232)
Q Consensus 83 ~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 121 (232)
...+++.++.+.+.++++|+..|.+-.++.++..+....
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 345677788888899999999998888777766655443
No 305
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=60.29 E-value=86 Score=25.64 Aligned_cols=17 Identities=12% Similarity=0.075 Sum_probs=8.5
Q ss_pred hhHHHHHHHHHhhhchH
Q 026854 89 LPGLILSAIIVDKIGRK 105 (232)
Q Consensus 89 ~~~~~~~g~l~dr~grr 105 (232)
..++.+...+.|++-+|
T Consensus 236 ~a~g~l~~~~~~~~~~g 252 (403)
T TIGR00836 236 AAAGGLTWLLIDWLKHG 252 (403)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 34444445666665433
No 306
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=60.05 E-value=74 Score=24.13 Aligned_cols=60 Identities=12% Similarity=-0.009 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 131 TTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
.+....+.-...+.-+....+.+.+-+|+++|-++.=+--...-+--.+.-....++.+.
T Consensus 19 ~l~tl~~lE~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l 78 (254)
T COG0861 19 ALLTLILLEIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL 78 (254)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444555566677888889999999998877755433322223333333444556554
No 307
>PRK02237 hypothetical protein; Provisional
Probab=59.62 E-value=44 Score=21.43 Aligned_cols=50 Identities=8% Similarity=-0.035 Sum_probs=37.5
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 124 (232)
.+.+-....++-..++.++++++..|+...-+.=.++..++.++...+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 34677788888888999999999999987666666677666666655433
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=56.24 E-value=52 Score=28.27 Aligned_cols=63 Identities=10% Similarity=-0.051 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhcc
Q 026854 129 VVTTVLLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSC 191 (232)
Q Consensus 129 ~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 191 (232)
++.+--.++.|++-........-+.-+-.|++.|+.+.++......+|..+...+........
T Consensus 459 ~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 459 LWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344444566666665555555555566679999999999999999999999998886665444
No 309
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=54.63 E-value=18 Score=23.05 Aligned_cols=35 Identities=9% Similarity=-0.203 Sum_probs=23.6
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 187 LVTSCHLRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 187 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
-.+.-+|...+++...++++.+.+.+.+.|++.-+
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~ 87 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQ 87 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 34555788888776666666666666677888653
No 310
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=50.32 E-value=1.5e+02 Score=24.75 Aligned_cols=26 Identities=12% Similarity=0.261 Sum_probs=14.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhc-hH
Q 026854 80 DVFITSFAELPGLILSAIIVDKIG-RK 105 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~l~dr~g-rr 105 (232)
...+..+.+.+..-.+|.+-.|.| ||
T Consensus 332 aI~vYAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 332 AIVVYALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred HHHHHHhcccccccccceeeehhccHH
Confidence 344445555555555565666776 44
No 311
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=47.72 E-value=54 Score=18.91 Aligned_cols=33 Identities=12% Similarity=-0.038 Sum_probs=17.3
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhcccccccCC
Q 026854 189 TSCHLRLAVILFEVVFVLAIASSLLFPFETKGR 221 (232)
Q Consensus 189 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 221 (232)
...||...+++...+.+++.-.+-..+||..+.
T Consensus 26 kGag~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 26 KGAGYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 333455555555555555544455566876544
No 312
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=46.81 E-value=2.1e+02 Score=25.50 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=27.2
Q ss_pred HHHHHhh----hchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHH
Q 026854 95 SAIIVDK----IGRKLSMVLMFVLACIFLLPLVF-HQSAVVTTVLLFGVRMCA 142 (232)
Q Consensus 95 ~g~l~dr----~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ 142 (232)
.+-++|. -||.+-++++.++..++.+...+ .+.++.+.....+..++.
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 3555664 35666666777777766666554 455555555544444433
No 313
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=45.31 E-value=2.3e+02 Score=25.35 Aligned_cols=48 Identities=15% Similarity=0.096 Sum_probs=27.8
Q ss_pred HHHHHhh----hchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHH
Q 026854 95 SAIIVDK----IGRKLSMVLMFVLACIFLLPLVF-HQSAVVTTVLLFGVRMCA 142 (232)
Q Consensus 95 ~g~l~dr----~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ 142 (232)
++-+.|. -||.+-++++..++.++.+...+ .+.++.+.....+.+++.
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3445553 35667777777777777766665 445555554444444433
No 314
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=43.87 E-value=60 Score=23.17 Aligned_cols=28 Identities=21% Similarity=0.269 Sum_probs=18.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 026854 79 VDVFITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
+......+..++++++++++..|.-||.
T Consensus 156 ~~~~~~~~~~~v~a~lG~~lG~kllkKH 183 (186)
T PF09605_consen 156 WMLIIIIIITFVGALLGALLGKKLLKKH 183 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555667777788888887776663
No 315
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=43.74 E-value=26 Score=23.62 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=17.1
Q ss_pred cccccccchhhhhhHHHHHhhh
Q 026854 153 APEIYPTSARTTGAGVASAVGR 174 (232)
Q Consensus 153 ~~e~~p~~~r~~~~~~~~~~~~ 174 (232)
+.|++|+..|....+......+
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 5799999999987777665543
No 316
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=43.43 E-value=55 Score=17.78 Aligned_cols=30 Identities=20% Similarity=0.115 Sum_probs=16.7
Q ss_pred HhhhhhHHHHHHHHHhh-hchHHHHHHHHHH
Q 026854 85 SFAELPGLILSAIIVDK-IGRKLSMVLMFVL 114 (232)
Q Consensus 85 ~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~ 114 (232)
.+..++.....|+..|+ ++.++...+...+
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 34455556667777775 5664544443333
No 317
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=42.19 E-value=1.3e+02 Score=21.73 Aligned_cols=34 Identities=9% Similarity=0.030 Sum_probs=16.9
Q ss_pred HHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHH
Q 026854 169 ASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVV 203 (232)
Q Consensus 169 ~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~ 203 (232)
.+....++-.+|..+++.+.+..+.+ ..++.+..
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 33444455555566666666665643 33333333
No 318
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=38.87 E-value=64 Score=17.17 Aligned_cols=13 Identities=15% Similarity=-0.013 Sum_probs=5.8
Q ss_pred hhHHHHHHHhhcc
Q 026854 179 VCPLVAVGLVTSC 191 (232)
Q Consensus 179 ~~~~i~~~l~~~~ 191 (232)
+++++++++.+..
T Consensus 6 iGa~vGg~l~~~l 18 (48)
T PF04226_consen 6 IGAFVGGWLFGLL 18 (48)
T ss_pred HHHHHHHHHHHHh
Confidence 4444444444433
No 319
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=38.62 E-value=45 Score=20.85 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=14.7
Q ss_pred HHhhhhhHHHHHHHHHhhhchH
Q 026854 84 TSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 84 ~~~~~~~~~~~~g~l~dr~grr 105 (232)
......+.+.+.|.+.||..||
T Consensus 84 ~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 84 TFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3445567788899999999876
No 320
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=37.77 E-value=1.3e+02 Score=20.56 Aligned_cols=23 Identities=4% Similarity=0.132 Sum_probs=17.6
Q ss_pred HHhhhhhHHHHHHHHHhhhchHH
Q 026854 84 TSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 84 ~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
+-++..+.+.+.|++.+|..+++
T Consensus 62 yl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 62 YLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 44666788888999999987753
No 321
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=37.66 E-value=1.1e+02 Score=24.82 Aligned_cols=19 Identities=11% Similarity=0.249 Sum_probs=12.6
Q ss_pred HhhhchHHHHHHHHHHHHH
Q 026854 99 VDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 99 ~dr~grr~~~~~~~~~~~~ 117 (232)
.||+.-.|++....-+.++
T Consensus 208 ~e~ft~sKllav~~si~GV 226 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSIAGV 226 (416)
T ss_pred cchhhHHHHHHHHHhhccE
Confidence 8999888876655444433
No 322
>COG1972 NupC Nucleoside permease [Nucleotide transport and metabolism]
Probab=37.29 E-value=1.4e+02 Score=24.20 Aligned_cols=66 Identities=8% Similarity=-0.049 Sum_probs=35.5
Q ss_pred cccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhHHHHHHHHHHH--HHHHHHhcccccccCCC
Q 026854 153 APEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRLAVILFEVVFV--LAIASSLLFPFETKGRE 222 (232)
Q Consensus 153 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~e~~~~~ 222 (232)
+.+..++-.|.+-..+. ....+++-++.+++|.. .|...-+.+.+.+.. -+.++.-...|+|.+.+
T Consensus 154 vk~~l~~mt~selftv~--~~gmasVsgsilg~Y~~--mgvp~~yllaAs~m~~p~gli~Akii~P~t~~~~ 221 (404)
T COG1972 154 VKPYLGKMSRSELFTVM--ASGMASVSGSILGGYAS--MGVPPEYLLAASFMNAPGGLLFAKLINPYTEDEQ 221 (404)
T ss_pred hHHhhhhccHhHHHHHH--HhhHHHHHHHHHHHHHH--cCCCHHHHHHHHHHhcchHHHHHHhcCCCCCCcc
Confidence 34444444455544443 33456667777777653 344444555444432 34455556678876654
No 323
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.24 E-value=1.4e+02 Score=22.76 Aligned_cols=23 Identities=13% Similarity=0.098 Sum_probs=13.6
Q ss_pred ccchhhhhhHHHHHhhhhhhchh
Q 026854 158 PTSARTTGAGVASAVGRVGGMVC 180 (232)
Q Consensus 158 p~~~r~~~~~~~~~~~~~g~~~~ 180 (232)
-+-.|..++|+....++....+.
T Consensus 73 vpii~~iGLglg~liW~s~n~l~ 95 (254)
T PF07857_consen 73 VPIIKTIGLGLGMLIWGSVNCLT 95 (254)
T ss_pred hhHhhhhhhHHHHHHHHHHHHHH
Confidence 34556667777766666544433
No 324
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=36.46 E-value=1.5e+02 Score=20.88 Aligned_cols=37 Identities=8% Similarity=0.084 Sum_probs=16.4
Q ss_pred HHhhhhhHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHH
Q 026854 84 TSFAELPGLILSAIIVDKIG-RKLSMVLMFVLACIFLL 120 (232)
Q Consensus 84 ~~~~~~~~~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~ 120 (232)
..+.+++++++--.+-.|+. .=.=++.|.+..++..+
T Consensus 77 ~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~ 114 (173)
T PF11085_consen 77 IGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFF 114 (173)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 34445555555555555542 22233444444443333
No 325
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=35.73 E-value=98 Score=18.41 Aligned_cols=6 Identities=17% Similarity=0.268 Sum_probs=2.4
Q ss_pred cccccc
Q 026854 154 PEIYPT 159 (232)
Q Consensus 154 ~e~~p~ 159 (232)
.++.|+
T Consensus 64 ~~W~~~ 69 (76)
T PF06645_consen 64 LKWLPP 69 (76)
T ss_pred ccCCCC
Confidence 344443
No 326
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=35.47 E-value=2.1e+02 Score=22.21 Aligned_cols=28 Identities=7% Similarity=0.241 Sum_probs=18.4
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 026854 97 IIVDKIGRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 97 ~l~dr~grr~~~~~~~~~~~~~~~~~~~ 124 (232)
++-||+.|-....++....++.......
T Consensus 119 flkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 119 FLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 6778888877777666666655444433
No 327
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=35.08 E-value=1.7e+02 Score=20.92 Aligned_cols=48 Identities=10% Similarity=-0.063 Sum_probs=26.4
Q ss_pred hhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhc
Q 026854 143 TGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTS 190 (232)
Q Consensus 143 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 190 (232)
+.-+....+.+.+..|+++|.++.-+-....-+--.+.-..+.++.+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~ 58 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI 58 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666778887777655443333333333444455555554
No 328
>TIGR03732 lanti_perm_MutE lantibiotic protection ABC transporter permease subunit, MutE/EpiE family. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene, modeled separately.
Probab=34.61 E-value=1.9e+02 Score=21.53 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=23.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 026854 80 DVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACI 117 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 117 (232)
......++.+.-.++.-+++.|+|.-..+.++.....+
T Consensus 128 ~~l~~~i~sl~~i~l~l~ls~~~g~~~si~ig~~~~li 165 (241)
T TIGR03732 128 ASLLIWLTSLWQIPLCLFLARKFGMFVSILVNLVLGLI 165 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555556667888888766666666654443
No 329
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=34.60 E-value=1.8e+02 Score=21.14 Aligned_cols=56 Identities=11% Similarity=0.022 Sum_probs=26.0
Q ss_pred cccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchh-HHHHHHHHHHHHHH
Q 026854 153 APEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLR-LAVILFEVVFVLAI 208 (232)
Q Consensus 153 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~-~~~~~~~~~~~~~~ 208 (232)
..+-.++++|-+..--......+-..+....+.++.+.+|.. ..+-+.+++.+...
T Consensus 27 lt~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~i 83 (203)
T PF01914_consen 27 LTKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLI 83 (203)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 344455555544333333333333344445555666666643 24555555544333
No 330
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=34.27 E-value=62 Score=15.71 Aligned_cols=19 Identities=5% Similarity=0.137 Sum_probs=11.5
Q ss_pred HHHhhhhhHHHHHHHHHhh
Q 026854 83 ITSFAELPGLILSAIIVDK 101 (232)
Q Consensus 83 ~~~~~~~~~~~~~g~l~dr 101 (232)
...+++++.+++.+|+-+|
T Consensus 16 AP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 3455666666666666554
No 331
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=33.72 E-value=2.5e+02 Score=22.50 Aligned_cols=17 Identities=12% Similarity=0.213 Sum_probs=10.1
Q ss_pred hhhhhHHHHHHHHHhhh
Q 026854 86 FAELPGLILSAIIVDKI 102 (232)
Q Consensus 86 ~~~~~~~~~~g~l~dr~ 102 (232)
+..++..+..|++..|.
T Consensus 6 i~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34455556667777765
No 332
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=33.30 E-value=49 Score=25.17 Aligned_cols=54 Identities=9% Similarity=0.260 Sum_probs=27.4
Q ss_pred hhhhhhHHHHHhhhhhhchh--HHHHH-HHhh--ccchhHHHHHHHHHHHHHHHHHhcc
Q 026854 161 ARTTGAGVASAVGRVGGMVC--PLVAV-GLVT--SCHLRLAVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 161 ~r~~~~~~~~~~~~~g~~~~--~~i~~-~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
+|+.-..+.....++|+++. |++.+ -..+ ...|...+.+.+++.++-+++...+
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444444446666655 33333 1111 2247766777776666666555554
No 333
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=32.95 E-value=14 Score=28.08 Aligned_cols=12 Identities=8% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHhccccccc
Q 026854 208 IASSLLFPFETK 219 (232)
Q Consensus 208 ~~~~~~~~~e~~ 219 (232)
++++|+++.+++
T Consensus 178 aiLIWlY~H~~~ 189 (381)
T PF05297_consen 178 AILIWLYVHDQR 189 (381)
T ss_dssp ------------
T ss_pred HHHHHHHhcCCC
Confidence 344555555554
No 334
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=32.35 E-value=23 Score=26.18 Aligned_cols=50 Identities=12% Similarity=0.098 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhhhhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHH
Q 026854 134 LLFGVRMCATGTITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVA 184 (232)
Q Consensus 134 ~~~~~g~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 184 (232)
+..-.|.+++...+....-+.+.+| +...+..++....+-+.+..|-++.
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566777777777777788886 4445555555555545554444443
No 335
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=32.33 E-value=2.1e+02 Score=23.00 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=37.1
Q ss_pred chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 026854 74 DNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLL 120 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 120 (232)
....+..+..+++...+.+.+.|.++.++||-.....+.+.-.....
T Consensus 309 v~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~ 355 (390)
T KOG3097|consen 309 VSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLIT 355 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHH
Confidence 35567778888889889999999999999999888877766544333
No 336
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=31.94 E-value=1.9e+02 Score=20.64 Aligned_cols=43 Identities=16% Similarity=0.333 Sum_probs=33.8
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 026854 81 VFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLV 123 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 123 (232)
.....+..+++.++.-.+..|.+||....+...+.++..+.+.
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 4455677788888999999999999998888877777665544
No 337
>PRK10666 ammonium transporter; Provisional
Probab=31.87 E-value=3e+02 Score=22.86 Aligned_cols=16 Identities=19% Similarity=0.011 Sum_probs=7.7
Q ss_pred HHHHHHHHHhhhchHH
Q 026854 91 GLILSAIIVDKIGRKL 106 (232)
Q Consensus 91 ~~~~~g~l~dr~grr~ 106 (232)
+..+...+.|++.+|+
T Consensus 262 ~g~l~~~~~~~~~~gk 277 (428)
T PRK10666 262 AAILGWVFGEWALRGK 277 (428)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 3333444566654444
No 338
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=30.95 E-value=1.3e+02 Score=18.49 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=24.8
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 026854 19 FFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLSSG 58 (232)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (232)
++++. +++++..+.+....+...+++.....+.|.....
T Consensus 7 f~~L~-r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~ 45 (91)
T PF04341_consen 7 FQELV-RRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMAT 45 (91)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcC
Confidence 44454 3444555566666666777777777888888743
No 339
>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins. Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].
Probab=30.93 E-value=1.4e+02 Score=18.76 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=23.6
Q ss_pred HhhhhhHHHHHHHHHhh-hchHHHHHHHHHHHHHHHH
Q 026854 85 SFAELPGLILSAIIVDK-IGRKLSMVLMFVLACIFLL 120 (232)
Q Consensus 85 ~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~ 120 (232)
.+...+.-+..|+..+| +|.|..+....+...+..+
T Consensus 24 ~l~~~~~l~~~g~~lE~~WGs~E~lkFi~vv~~~tnl 60 (99)
T PF08551_consen 24 LLFSLLTLFYGGRYLEPIWGSREFLKFILVVNVITNL 60 (99)
T ss_pred HHHHHHHHHHhhHHHHHhcChHHHHHHHHHHHHHhHH
Confidence 34555666677888887 7988877766655554443
No 340
>PRK04949 putative sulfate transport protein CysZ; Validated
Probab=30.85 E-value=2.4e+02 Score=21.39 Aligned_cols=21 Identities=14% Similarity=0.485 Sum_probs=16.5
Q ss_pred HHHHhhhhhHHHHHHHHHhhh
Q 026854 82 FITSFAELPGLILSAIIVDKI 102 (232)
Q Consensus 82 ~~~~~~~~~~~~~~g~l~dr~ 102 (232)
....+..++++++.+.++||.
T Consensus 89 lf~~v~~~IaaPF~~~lAE~V 109 (251)
T PRK04949 89 FFSTLANFIAAPFNGLLAEKV 109 (251)
T ss_pred HHHHHHHHHHHHHhHHHHHHH
Confidence 344577888889999999987
No 341
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=30.20 E-value=57 Score=17.29 Aligned_cols=11 Identities=0% Similarity=-0.260 Sum_probs=4.8
Q ss_pred HHHHhcccccc
Q 026854 208 IASSLLFPFET 218 (232)
Q Consensus 208 ~~~~~~~~~e~ 218 (232)
+++.+.+.|+.
T Consensus 24 gi~~w~~~~~~ 34 (49)
T PF05545_consen 24 GIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHcccc
Confidence 33444444443
No 342
>PRK10692 hypothetical protein; Provisional
Probab=30.15 E-value=1.4e+02 Score=18.36 Aligned_cols=20 Identities=35% Similarity=0.273 Sum_probs=12.4
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 026854 104 RKLSMVLMFVLACIFLLPLV 123 (232)
Q Consensus 104 rr~~~~~~~~~~~~~~~~~~ 123 (232)
||...+++-.+++++++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv 22 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVMV 22 (92)
T ss_pred chhhHHHhhHHHHHHHHHHH
Confidence 56666666666666655543
No 343
>COG4708 Predicted membrane protein [Function unknown]
Probab=30.08 E-value=91 Score=21.24 Aligned_cols=24 Identities=33% Similarity=0.715 Sum_probs=19.5
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHH
Q 026854 83 ITSFAELPGLILSAIIVDKIGRKL 106 (232)
Q Consensus 83 ~~~~~~~~~~~~~g~l~dr~grr~ 106 (232)
..+++..++..+++.+.|+.|+|.
T Consensus 142 tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 142 TTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhh
Confidence 346778888888999999999884
No 344
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=30.05 E-value=2.1e+02 Score=20.51 Aligned_cols=31 Identities=13% Similarity=0.073 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 105 (232)
...+...+..++.....++.+++-.-|+|||
T Consensus 55 ~~~gl~~a~~gl~~l~~si~~~fry~Rlar~ 85 (183)
T PF12263_consen 55 LGIGLFLAICGLVALFFSIFWSFRYTRLARR 85 (183)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777888888888888777777665
No 345
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=29.91 E-value=1.6e+02 Score=19.11 Aligned_cols=8 Identities=25% Similarity=0.335 Sum_probs=3.6
Q ss_pred hhhchHHH
Q 026854 100 DKIGRKLS 107 (232)
Q Consensus 100 dr~grr~~ 107 (232)
.|++|-|.
T Consensus 6 ~KiN~~R~ 13 (114)
T PF11023_consen 6 SKINKIRT 13 (114)
T ss_pred hHHHHHHH
Confidence 34554443
No 346
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=29.07 E-value=1.9e+02 Score=19.78 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=30.2
Q ss_pred CCCCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 70 DKSKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
.+....+......+.++.-.++.+++.+++|+.++-..+.+
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~ 107 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVI 107 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 34566666666777788888888999999999887655443
No 347
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=29.02 E-value=3.3e+02 Score=22.42 Aligned_cols=14 Identities=21% Similarity=0.482 Sum_probs=6.6
Q ss_pred hhHHHHHHHHHhhh
Q 026854 89 LPGLILSAIIVDKI 102 (232)
Q Consensus 89 ~~~~~~~g~l~dr~ 102 (232)
..+..+...+.|+.
T Consensus 250 ~a~g~l~~~~~~~~ 263 (404)
T TIGR03644 250 AAGGAIAALLLTKL 263 (404)
T ss_pred HHHHHHHHHHHHHH
Confidence 33444445555554
No 348
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=28.80 E-value=2.5e+02 Score=20.97 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=24.4
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 026854 86 FAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCA 142 (232)
Q Consensus 86 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 142 (232)
++..+|..+..++.||+.+......+.....++.-...-.++. ...+..+..|...
T Consensus 13 ~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~-~~vi~slvlG~ii 68 (226)
T PF04474_consen 13 LGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNP-LLVILSLVLGTII 68 (226)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCcc-HHHHHHHHHHHHH
Confidence 3444455555555555544444444444444433333323333 3334444444433
No 349
>PF06898 YqfD: Putative stage IV sporulation protein YqfD; InterPro: IPR010690 This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis (P54469 from SWISSPROT) is known to be essential for efficient sporulation although its exact function is unknown [].
Probab=28.67 E-value=93 Score=25.25 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=23.0
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 026854 96 AIIVDKIGRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 96 g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 124 (232)
.++..|+.||+.+++|++++++..+.++.
T Consensus 78 pF~~~r~~~R~~~~~G~~~f~~~l~~lS~ 106 (385)
T PF06898_consen 78 PFFLKRLRRRKGFVAGIVLFLALLYILSS 106 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46778999999999999888777666654
No 350
>PF15192 TMEM213: TMEM213 family
Probab=28.52 E-value=76 Score=18.63 Aligned_cols=16 Identities=6% Similarity=-0.105 Sum_probs=9.4
Q ss_pred HHHHhhccchhHHHHH
Q 026854 184 AVGLVTSCHLRLAVIL 199 (232)
Q Consensus 184 ~~~l~~~~g~~~~~~~ 199 (232)
.||+....||...|+-
T Consensus 45 yGWIAAAVGWSLwFLT 60 (82)
T PF15192_consen 45 YGWIAAAVGWSLWFLT 60 (82)
T ss_pred hhHHHHHHhHHHHHHH
Confidence 4666666677644443
No 351
>PRK10995 inner membrane protein; Provisional
Probab=28.00 E-value=2.5e+02 Score=20.71 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=16.8
Q ss_pred hhHHHHHHHhhccchhH-HHHHHHHHHHHHHHHH
Q 026854 179 VCPLVAVGLVTSCHLRL-AVILFEVVFVLAIASS 211 (232)
Q Consensus 179 ~~~~i~~~l~~~~g~~~-~~~~~~~~~~~~~~~~ 211 (232)
+..+.+..+.+.+|... .+-+.+++.+...-+-
T Consensus 57 ~f~~~G~~il~~fgIs~~a~rIaGGilL~~igi~ 90 (221)
T PRK10995 57 VAFYAGQLVMSTFGISIPGLRIAGGLIVAFIGFR 90 (221)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 44455556666666443 4555555554443333
No 352
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=27.43 E-value=2.2e+02 Score=19.96 Aligned_cols=23 Identities=17% Similarity=0.362 Sum_probs=12.6
Q ss_pred hhhhhHHHHHHHHHhhhchHHHH
Q 026854 86 FAELPGLILSAIIVDKIGRKLSM 108 (232)
Q Consensus 86 ~~~~~~~~~~g~l~dr~grr~~~ 108 (232)
+...+.-.+.|++.-|++.++..
T Consensus 124 ~~~~~~L~ilG~~~a~~s~~~~~ 146 (169)
T TIGR00267 124 LLTLIALLVLGVYLGRISRENIL 146 (169)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHH
Confidence 34445555566666666554443
No 353
>PF13491 DUF4117: Domain of unknown function (DUF4117)
Probab=26.63 E-value=2.2e+02 Score=19.64 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=23.9
Q ss_pred hhhhchhHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 026854 174 RVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIAS 210 (232)
Q Consensus 174 ~~g~~~~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 210 (232)
..|+.+|..+...+.+..|......+.....++..+.
T Consensus 121 ~~GG~iG~~l~~~l~~~lG~~Ga~iil~~~~~~~l~l 157 (171)
T PF13491_consen 121 GGGGIIGYLLASLLVKLLGKVGALIILLVLLLIGLLL 157 (171)
T ss_pred CCCCHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3567777777777777777766666655555554443
No 354
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=26.33 E-value=2.6e+02 Score=20.46 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=9.7
Q ss_pred HhhhhhHHHHHHHHHhhhchH
Q 026854 85 SFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 85 ~~~~~~~~~~~g~l~dr~grr 105 (232)
..+.++|..++.++.+|+.+|
T Consensus 203 ~~~~~~G~~lG~~~~~~i~~~ 223 (240)
T PF01925_consen 203 LPGAFLGAFLGAKLARKIPQK 223 (240)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 334444444444555554443
No 355
>PHA03231 glycoprotein BALF4; Provisional
Probab=26.22 E-value=1.2e+02 Score=27.35 Aligned_cols=23 Identities=26% Similarity=0.319 Sum_probs=13.7
Q ss_pred hHHHHHhhhhhhchhHHHHHHHh
Q 026854 166 AGVASAVGRVGGMVCPLVAVGLV 188 (232)
Q Consensus 166 ~~~~~~~~~~g~~~~~~i~~~l~ 188 (232)
-++.+.++.+++++++.+.|.+.
T Consensus 676 k~vg~vv~~v~ga~~SiVsG~~s 698 (829)
T PHA03231 676 KAVGNVVSGVAGAVGSIVSGVIS 698 (829)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHH
Confidence 34455556666667776666543
No 356
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=26.11 E-value=58 Score=20.74 Aligned_cols=44 Identities=5% Similarity=-0.192 Sum_probs=29.6
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q 026854 76 SLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFL 119 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~ 119 (232)
..+-....++-..++.++.+++..|+...-+-=.++..++.++.
T Consensus 56 a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~ 99 (109)
T COG1742 56 AFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGV 99 (109)
T ss_pred hhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhce
Confidence 34556666777778889999999998765555455555554443
No 357
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=26.00 E-value=2.1e+02 Score=21.59 Aligned_cols=23 Identities=13% Similarity=0.002 Sum_probs=9.5
Q ss_pred HHHHHHhhccchhHHHHHHHHHH
Q 026854 182 LVAVGLVTSCHLRLAVILFEVVF 204 (232)
Q Consensus 182 ~i~~~l~~~~g~~~~~~~~~~~~ 204 (232)
...|.+.|+.|.+....+-++..
T Consensus 54 ~~~G~l~d~~gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVLLIGAVLG 76 (250)
T ss_pred HHHHHHHHhcchHHHHHHHHHHH
Confidence 33344444444443333333333
No 358
>PRK03818 putative transporter; Validated
Probab=25.99 E-value=4.3e+02 Score=22.81 Aligned_cols=35 Identities=11% Similarity=0.021 Sum_probs=17.6
Q ss_pred hhhhhhhccccc-cccchhhhhhHHHHHhhhhhhch
Q 026854 145 TITVATIYAPEI-YPTSARTTGAGVASAVGRVGGMV 179 (232)
Q Consensus 145 ~~~~~~~~~~e~-~p~~~r~~~~~~~~~~~~~g~~~ 179 (232)
..+....++.|. .+.+.-..+.+..|-.+-++-++
T Consensus 505 t~tp~l~~a~~~~~~~~~~~~gYa~~Yp~~~~~~i~ 540 (552)
T PRK03818 505 TDPPALAFANNLHPTSGAAALSYATVYPLVMFLRII 540 (552)
T ss_pred CCcHHHHHHhcccCCCCCcccchHHHHHHHHHHHHH
Confidence 345555666774 44443344455555554444433
No 359
>TIGR02876 spore_yqfD sporulation protein YqfD. YqfD is part of the sigma-E regulon in the sporulation program of endospore-forming Gram-positive bacteria. Mutation results in a sporulation defect in Bacillus subtilis. Members are found in all currently known endospore-forming bacteria, including the genera Bacillus, Symbiobacterium, Carboxydothermus, Clostridium, and Thermoanaerobacter.
Probab=25.89 E-value=1e+02 Score=24.94 Aligned_cols=29 Identities=7% Similarity=0.202 Sum_probs=22.4
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 026854 96 AIIVDKIGRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 96 g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 124 (232)
.++..|+-||+.+++|++++++..+.++.
T Consensus 75 pF~~~r~~kRk~~~~G~~~f~~ll~~lS~ 103 (382)
T TIGR02876 75 PFLFKRLRKRPGILIGILLFLAIVYFLSN 103 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 46778999999999999887776665543
No 360
>PF14012 DUF4229: Protein of unknown function (DUF4229)
Probab=25.42 E-value=1.2e+02 Score=17.60 Aligned_cols=15 Identities=13% Similarity=0.230 Sum_probs=7.4
Q ss_pred HHHHHHHhccccccc
Q 026854 205 VLAIASSLLFPFETK 219 (232)
Q Consensus 205 ~~~~~~~~~~~~e~~ 219 (232)
+++..+.+++.+..+
T Consensus 41 vis~~lS~~ll~~~R 55 (69)
T PF14012_consen 41 VISMPLSYVLLRRLR 55 (69)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555554433
No 361
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=25.19 E-value=1.6e+02 Score=17.67 Aligned_cols=13 Identities=31% Similarity=0.299 Sum_probs=6.3
Q ss_pred HHHHhhhchHHHH
Q 026854 96 AIIVDKIGRKLSM 108 (232)
Q Consensus 96 g~l~dr~grr~~~ 108 (232)
-.+..|.|+|++-
T Consensus 21 D~iG~kvGKkrls 33 (79)
T PF11283_consen 21 DRIGSKVGKKRLS 33 (79)
T ss_pred HHHHHHHhHHHhh
Confidence 3444445666543
No 362
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=25.09 E-value=1.7e+02 Score=17.83 Aligned_cols=19 Identities=26% Similarity=0.259 Sum_probs=11.6
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 026854 104 RKLSMVLMFVLACIFLLPL 122 (232)
Q Consensus 104 rr~~~~~~~~~~~~~~~~~ 122 (232)
||...+++-.+++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVVM 21 (89)
T ss_pred chhhHHHhhHHHHHhHHHH
Confidence 5666666666666655544
No 363
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.90 E-value=1.9e+02 Score=18.35 Aligned_cols=24 Identities=17% Similarity=0.122 Sum_probs=12.0
Q ss_pred hHHHHHHHHHhh-hchHHHHHHHHH
Q 026854 90 PGLILSAIIVDK-IGRKLSMVLMFV 113 (232)
Q Consensus 90 ~~~~~~g~l~dr-~grr~~~~~~~~ 113 (232)
+.....|...|+ ++-++.+.+.++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 444455666665 665444333333
No 364
>PTZ00370 STEVOR; Provisional
Probab=24.63 E-value=3.4e+02 Score=21.11 Aligned_cols=13 Identities=0% Similarity=0.171 Sum_probs=5.1
Q ss_pred HHHhcccccccCC
Q 026854 209 ASSLLFPFETKGR 221 (232)
Q Consensus 209 ~~~~~~~~e~~~~ 221 (232)
++.++|+.+++++
T Consensus 272 iilYiwlyrrRK~ 284 (296)
T PTZ00370 272 IILYIWLYRRRKN 284 (296)
T ss_pred HHHHHHHHHhhcc
Confidence 3334444343333
No 365
>TIGR03716 R_switched_YkoY integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.
Probab=23.36 E-value=3.1e+02 Score=20.25 Aligned_cols=44 Identities=11% Similarity=-0.008 Sum_probs=23.7
Q ss_pred hhhhhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhh
Q 026854 146 ITVATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVT 189 (232)
Q Consensus 146 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 189 (232)
+....+.+.+-.|+++|.++.-+-....-+--.+....+.++.+
T Consensus 11 N~~via~~~~~LP~~~r~~al~~Gi~gAivlR~i~i~~~~~Ll~ 54 (215)
T TIGR03716 11 NALVLAVMVKHLPEKQRKKALFYGLIGAYVFRFIALFLASFLIK 54 (215)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555566788877766544433333334444455556655
No 366
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=23.13 E-value=2.9e+02 Score=19.81 Aligned_cols=42 Identities=12% Similarity=0.247 Sum_probs=31.7
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 026854 81 VFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPL 122 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 122 (232)
.....+..+++.++.-.+..|.+|+..+.+...+.++..+..
T Consensus 36 ~~~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~ 77 (189)
T TIGR02185 36 LFSPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLLFFLM 77 (189)
T ss_pred HHHHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHHHHHH
Confidence 344567777888888899999999988887777766655433
No 367
>PRK02935 hypothetical protein; Provisional
Probab=22.98 E-value=2.2e+02 Score=18.28 Aligned_cols=10 Identities=20% Similarity=0.345 Sum_probs=5.2
Q ss_pred HhhhchHHHH
Q 026854 99 VDKIGRKLSM 108 (232)
Q Consensus 99 ~dr~grr~~~ 108 (232)
+.|++|-|..
T Consensus 6 ssKINkiRt~ 15 (110)
T PRK02935 6 SNKINKIRTF 15 (110)
T ss_pred hhHHHHHHHH
Confidence 4566655443
No 368
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=22.52 E-value=3.2e+02 Score=20.00 Aligned_cols=66 Identities=20% Similarity=0.169 Sum_probs=32.9
Q ss_pred hhhccccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHhcc
Q 026854 149 ATIYAPEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRL-AVILFEVVFVLAIASSLLF 214 (232)
Q Consensus 149 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 214 (232)
...-+.+-+|+++|-+..=-........-.+.-..+.++.+.+|... .+-+.+++.+....+-..+
T Consensus 26 vf~slt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~fgIsi~a~rIAGGilLf~ia~~ml~ 92 (203)
T COG2095 26 VFISLTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFFGISIDAFRIAGGILLFLIALRMLF 92 (203)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHhhhHHHHHHHHHHhc
Confidence 34445666777777764444344333444444455556666555432 3444444444333333333
No 369
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.34 E-value=4.4e+02 Score=21.54 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=21.6
Q ss_pred CCchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH
Q 026854 72 SKDNSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVL 110 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~ 110 (232)
.+..+.........++..+++++-.+-.-++|.|..+..
T Consensus 25 l~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~ 63 (406)
T TIGR03173 25 LSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQ 63 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceee
Confidence 666665666666666666666665432224565544443
No 370
>KOG4473 consensus Uncharacterized membrane protein [Function unknown]
Probab=22.31 E-value=3e+02 Score=20.38 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=20.3
Q ss_pred ccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchh
Q 026854 158 PTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLR 194 (232)
Q Consensus 158 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~ 194 (232)
|.+.|..-.++.......-+.+.|++...++.....+
T Consensus 158 p~~~~p~qaA~asa~afslGg~vPLl~~~fi~~~~~~ 194 (247)
T KOG4473|consen 158 PAENRPLQAAAASALAFSLGGIVPLLPAAFVKDYKVR 194 (247)
T ss_pred CCCCchHHHHHHHHHHHHhccHHhhhHHHhhhhhhhh
Confidence 4455555555555555444456666666565555444
No 371
>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms]
Probab=22.24 E-value=4.6e+02 Score=21.82 Aligned_cols=22 Identities=14% Similarity=0.098 Sum_probs=12.4
Q ss_pred HHhhhhhHHHHHHHHHhhhchH
Q 026854 84 TSFAELPGLILSAIIVDKIGRK 105 (232)
Q Consensus 84 ~~~~~~~~~~~~g~l~dr~grr 105 (232)
..+...++.-.....+.++|+|
T Consensus 66 ~~~~~gl~~g~~~liaq~~Ga~ 87 (455)
T COG0534 66 IAIFIGLGTGTTVLVAQAIGAG 87 (455)
T ss_pred HHHHHHHHHhHHHHHHHHHcCC
Confidence 3344444455556777777753
No 372
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=22.06 E-value=4e+02 Score=20.98 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=54.9
Q ss_pred hhhhhHHHHHHHHHhhhchHH-----HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhccccccccc
Q 026854 86 FAELPGLILSAIIVDKIGRKL-----SMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATGTITVATIYAPEIYPTS 160 (232)
Q Consensus 86 ~~~~~~~~~~g~l~dr~grr~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~e~~p~~ 160 (232)
..-++..-+++.++||-|.-. +++.+....... .....++|.-+... ...+...+...++.+.....+
T Consensus 18 atPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~---~~~t~spw~gl~~a----~l~g~l~~ll~a~~ti~l~~n 90 (304)
T COG1079 18 ATPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALF---AYGTGSPWLGLLAA----ALVGALFGLLHAFLTIKLRAN 90 (304)
T ss_pred HHHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHH---HHccccHHHHHHHH----HHHHHHHHHHHHHHHHhhccc
Confidence 334455567889999977654 445444443333 11134455443333 334445566666677777677
Q ss_pred hhhhhhHHHHHhhhhhhchhHHHHHHH
Q 026854 161 ARTTGAGVASAVGRVGGMVCPLVAVGL 187 (232)
Q Consensus 161 ~r~~~~~~~~~~~~~g~~~~~~i~~~l 187 (232)
+--++.++......+...++..+.+.-
T Consensus 91 qiisG~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 91 QIISGLALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhccC
Confidence 777777777766666666665555533
No 373
>PF08080 zf-RNPHF: RNPHF zinc finger; InterPro: IPR012996 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc-binding domain (CHHC motif) in RNP H and F. The domain is often associated with IPR000504 from INTERPRO. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1WEZ_A 2KG1_A.
Probab=21.84 E-value=30 Score=16.95 Aligned_cols=9 Identities=56% Similarity=0.940 Sum_probs=0.0
Q ss_pred HhhhchHHH
Q 026854 99 VDKIGRKLS 107 (232)
Q Consensus 99 ~dr~grr~~ 107 (232)
+||+||-..
T Consensus 3 sd~FGRd~~ 11 (36)
T PF08080_consen 3 SDRFGRDLS 11 (36)
T ss_dssp ---------
T ss_pred cchhcchhh
Confidence 577777543
No 374
>PRK10255 PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Probab=21.76 E-value=5.5e+02 Score=22.82 Aligned_cols=39 Identities=5% Similarity=0.138 Sum_probs=27.7
Q ss_pred hhhhhHHHHHHHHHhhh-------------chHHHHHHHHHHHHHHHHHHHh
Q 026854 86 FAELPGLILSAIIVDKI-------------GRKLSMVLMFVLACIFLLPLVF 124 (232)
Q Consensus 86 ~~~~~~~~~~g~l~dr~-------------grr~~~~~~~~~~~~~~~~~~~ 124 (232)
++.++..++.+++-+|+ |+|.+.++....+.+..+.+.+
T Consensus 99 fgGIi~G~i~a~l~nkf~~~klP~~l~fF~G~rfVpii~~~~~~~~g~i~~~ 150 (648)
T PRK10255 99 LAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGY 150 (648)
T ss_pred hhhhHHHHHHHHHHHHhccccCCceeeecCCcchhHhHHHHHHHHHHHHHHH
Confidence 55667777788888887 7787777777666665555544
No 375
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=21.42 E-value=5.4e+02 Score=22.30 Aligned_cols=98 Identities=21% Similarity=0.140 Sum_probs=42.2
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhh-hhhhhhhccc
Q 026854 76 SLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATG-TITVATIYAP 154 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~ 154 (232)
+.++...+..++.-.|.-+..-+.+ .|-+.. +.+.++..+..+..........-+=.....|...|+ ..+.......
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLF-LLGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 3555566666665555545544432 444433 344444443333222211111101011223333333 3455556666
Q ss_pred cccccchhhhhhHHHHHhhhh
Q 026854 155 EIYPTSARTTGAGVASAVGRV 175 (232)
Q Consensus 155 e~~p~~~r~~~~~~~~~~~~~ 175 (232)
|..+.+.-..+.+..|-.+++
T Consensus 529 ~~~~~~~~~~gYa~~Yp~~~i 549 (562)
T TIGR03802 529 ERAGSSVPALGYTITYALGNV 549 (562)
T ss_pred HhcCCCCcccchHhHHHHHHH
Confidence 666544434455555554443
No 376
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=21.17 E-value=4.6e+02 Score=21.42 Aligned_cols=29 Identities=24% Similarity=0.155 Sum_probs=11.0
Q ss_pred HHHHHHhhhc-hHHHHHHHHHHHHHHHHHH
Q 026854 94 LSAIIVDKIG-RKLSMVLMFVLACIFLLPL 122 (232)
Q Consensus 94 ~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~ 122 (232)
+...+.|++- +|..+....-....+.+.+
T Consensus 236 l~~~~~~~~~~gk~~~~~~~nG~laGlVai 265 (399)
T PF00909_consen 236 LTWLLISYLLSGKWSMVGICNGALAGLVAI 265 (399)
T ss_dssp HHHHHHHHHHCSS--HHHHHHHHHHHHHHH
T ss_pred HHHHHhhhccccccchhhhhhhhhhhhhhe
Confidence 3444555543 4444333333333333333
No 377
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=21.15 E-value=1.3e+02 Score=16.08 Aligned_cols=14 Identities=14% Similarity=-0.128 Sum_probs=6.5
Q ss_pred HHHHhcccccccCC
Q 026854 208 IASSLLFPFETKGR 221 (232)
Q Consensus 208 ~~~~~~~~~e~~~~ 221 (232)
+++.+.+.|..+++
T Consensus 25 giv~wa~~p~~k~~ 38 (48)
T cd01324 25 GVVVWAFRPGRKKA 38 (48)
T ss_pred HHHHHHhCCCcchh
Confidence 33445554554433
No 378
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=20.97 E-value=3.1e+02 Score=19.31 Aligned_cols=102 Identities=19% Similarity=0.164 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhh-hhhhhhhcc
Q 026854 75 NSLYVDVFITSFAELPGLILSAIIVDKIGRKLSMVLMFVLACIFLLPLVFHQSAVVTTVLLFGVRMCATG-TITVATIYA 153 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 153 (232)
.+.++...+..++.-.|.-+..-+.+. |-|. +..+.....+..+..........-.=.....|...|+ ..+......
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHHH
Confidence 455666666666666666555555444 4443 3344444444333332211111101112233333333 345556666
Q ss_pred ccc-cccchhh--hhhHHHHHhhhhhhc
Q 026854 154 PEI-YPTSART--TGAGVASAVGRVGGM 178 (232)
Q Consensus 154 ~e~-~p~~~r~--~~~~~~~~~~~~g~~ 178 (232)
.|. .+.+.-. .+.+..+-.+.++.+
T Consensus 134 ~~~~~~~~~~~~~vgYa~~Yp~g~i~~i 161 (169)
T PF06826_consen 134 QEAISDSGIPAIAVGYAVTYPFGVIGVI 161 (169)
T ss_pred HHhhhcCCCchhhhhHHHHHHHHHHHHH
Confidence 676 3333323 355555555444433
No 379
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=20.94 E-value=3.2e+02 Score=19.41 Aligned_cols=9 Identities=11% Similarity=0.235 Sum_probs=6.2
Q ss_pred ccchhhhcc
Q 026854 16 FSSFFTLFS 24 (232)
Q Consensus 16 ~~~~~~~~~ 24 (232)
..+|.+.|+
T Consensus 24 ~L~W~~ffk 32 (173)
T PF08566_consen 24 QLTWNEFFK 32 (173)
T ss_pred CCCHHHHHH
Confidence 467777775
No 380
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.86 E-value=2e+02 Score=19.64 Aligned_cols=22 Identities=18% Similarity=0.058 Sum_probs=16.6
Q ss_pred cccccccchhhhhhHHHHHhhh
Q 026854 153 APEIYPTSARTTGAGVASAVGR 174 (232)
Q Consensus 153 ~~e~~p~~~r~~~~~~~~~~~~ 174 (232)
+.|++|+..|....+.......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 5799999999987766655543
No 381
>TIGR00427 membrane protein, MarC family. MarC is a protein that spans the plasma membrane multiple times and once was thought to be a multiple antibiotic resistance protein. The function for this family is unknown.
Probab=20.57 E-value=3.4e+02 Score=19.69 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=23.7
Q ss_pred cccccccchhhhhhHHHHHhhhhhhchhHHHHHHHhhccchhH-HHHHHHHHHHHH
Q 026854 153 APEIYPTSARTTGAGVASAVGRVGGMVCPLVAVGLVTSCHLRL-AVILFEVVFVLA 207 (232)
Q Consensus 153 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~g~~~-~~~~~~~~~~~~ 207 (232)
..+-.++++|-+..--......+--.+..+.+.++.+.+|... .+-+.+++.+..
T Consensus 30 lt~~~~~~~r~~ia~~~~l~a~~ill~f~~~G~~iL~~fgIsl~afrIaGGiiL~~ 85 (201)
T TIGR00427 30 LTEYYTAAERNKIAKKANISSFIILLIFLVFGDTILKLFGISIDAFRIAGGILLFT 85 (201)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 3444455554432222222222222334445556666666443 344555444433
No 382
>COG3162 Predicted membrane protein [Function unknown]
Probab=20.42 E-value=2.4e+02 Score=17.86 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=25.5
Q ss_pred ccchhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026854 16 FSSFFTLFSRKLIRTTVLLWVLFFANAFSYYGAVLLTSKLS 56 (232)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (232)
...++++. +++++-.+.+.+.++...+.+-....|.|.++
T Consensus 12 ~p~f~eLv-~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l 51 (102)
T COG3162 12 NPRFRELV-RKRRRFAVPLTLIFLVVYFGFILLIAFAPGWL 51 (102)
T ss_pred CHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHh
Confidence 34466666 44455556666667777777777777777665
No 383
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=20.18 E-value=4.6e+02 Score=20.96 Aligned_cols=13 Identities=23% Similarity=0.261 Sum_probs=5.0
Q ss_pred HHHHHHHHHhhhc
Q 026854 91 GLILSAIIVDKIG 103 (232)
Q Consensus 91 ~~~~~g~l~dr~g 103 (232)
...+-=++.++..
T Consensus 183 ~nV~~E~~v~~~~ 195 (334)
T PF06027_consen 183 SNVLEEKLVKKAP 195 (334)
T ss_pred HHHHHHHhcccCC
Confidence 3333334444433
Done!