BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026855
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 130/191 (68%), Gaps = 13/191 (6%)
Query: 14 TSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAG 73
+++ WT E+K FE AL F E TP RWER+A +VPGK+ DV R+Y +L D+ IEAG
Sbjct: 22 STTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAG 81
Query: 74 LVELPGYEDEMDSPGRV-----------AESGASLGNNSNRSRDRETERRKGVPWTAEEH 122
V +PGY SP + +S + G S+ R E ER+KGVPWT EEH
Sbjct: 82 FVPVPGYS--TSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTEEEH 139
Query: 123 RLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSIHDITTV 182
+LFL+GL+KYGKGDWR+ISRN V++RTPTQVASHAQKYF+R S KDK+R+SIHDITTV
Sbjct: 140 KLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTV 199
Query: 183 DAAGSSSQSYD 193
+ + + + S D
Sbjct: 200 NLSDNQTPSPD 210
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 63/72 (87%)
Query: 110 ERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRK 169
ER++GVPWT EEH+LFL+GL+K GKGDWR ISRN V +RTPTQVASHAQKYFLR +++ +
Sbjct: 90 ERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNR 149
Query: 170 DKKRSSIHDITT 181
++RSS+ DITT
Sbjct: 150 RRRRSSLFDITT 161
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 9 SYSASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLR 68
S S S+ S WT ++K+FERAL + ++TP RW +A+ V GK+ +V+R YD LV DL
Sbjct: 3 SNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLI 62
Query: 69 KIEAGLVELPGYE 81
IE G V LP Y+
Sbjct: 63 NIETGRVPLPNYK 75
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAGLVEL 77
WTR+E+KLFERAL T+ ++TP RW +AR V GKS+ +V+R Y+ L+ D+ IE+G
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71
Query: 78 PGY 80
P Y
Sbjct: 72 PNY 74
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAGLVEL 77
WT +++K FERAL + ++TP RW +AR V GK+ + +R+YD LV D+ IE G V
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73
Query: 78 PGYEDEMDSPGRVAESGASLGNNSNRSRDRETERR 112
P Y+ + NSNR R R+ E+R
Sbjct: 74 PDYK--------------TTTGNSNRGRLRDEEKR 94
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 67.8 bits (164), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 9 SYSASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLR 68
+ S +T SSWT+EE++LF A + ++ ++I V K+ + V+ L L
Sbjct: 144 TISGATRSSWTKEEERLFVEAYKLYDKDN----KKIQEHVKTKTILQVRSHAQKFALKLE 199
Query: 69 KIEAGLVELPGYEDEMDSPGRVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLIG 128
K G+ L D +D L N S+ + PW+ EEH LFL
Sbjct: 200 K--NGIKSL----DNIDQ----------LFNQSHAASSSHNLPSHNTPWSNEEHELFLKA 243
Query: 129 LEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSIHDI 179
+EKYG+G+W+ IS + SR Q+ +HA+ YF +++ + +I ++
Sbjct: 244 IEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKKTIIEV 293
Score = 35.0 bits (79), Expect = 0.43, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSI 176
WT EE RLF+ + Y K D + I + V ++T QV SHAQK+ L++ K +I
Sbjct: 153 WTKEEERLFVEAYKLYDK-DNKKIQEH-VKTKTILQVRSHAQKFALKLEK-NGIKSLDNI 209
Query: 177 HDITTVDAAGSSSQSYDPSWVGPLTDQLETHRL 209
+ A SSS + PS P ++ E H L
Sbjct: 210 DQLFNQSHAASSSHNL-PSHNTPWSN--EEHEL 239
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAGLVEL 77
WT +++K FE+AL T+ ++TP RW+ +A+ V GK++ +V+R Y+ LV D+ IE G V
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73
Query: 78 PGY 80
P Y
Sbjct: 74 PNY 76
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 107 RETERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNS 166
++T ++G WT EEH FL G++ +GKG W+ I++ V +RTPTQ+ SHAQKY+LR
Sbjct: 371 KKTSLKQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQ 427
Query: 167 VRKDKKRSSIHDITTVD 183
K+K+ SIHD++ D
Sbjct: 428 ETKNKR--SIHDLSLQD 442
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 12 ASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
A+ S WT EE KL E+AL T+P TP RWE+IA VPG+S D +RY +LV
Sbjct: 547 AADMSPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELV 599
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 15 SSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
S+ WT EE KL E+AL T+P TP RWE+IA VPG++ D RRY +LV
Sbjct: 551 STPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELV 600
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 17 SWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV---LDLRKIEAG 73
+W+ ++ +L +A+ FP T RWE IA + SS V+R D++ L+K++
Sbjct: 453 NWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVISKAKSLQKLD-- 510
Query: 74 LVELPGYEDEMDSPG----RVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLIGL 129
P +D+++ + AS +++ S E PWT EE +L L
Sbjct: 511 ----PHQKDDINKKAFDKFKKEHGVASQADSAAPSERFEGPCIDSTPWTTEEQKLLEQAL 566
Query: 130 EKY 132
+ Y
Sbjct: 567 KTY 569
>sp|Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1
Length = 100
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 21 EEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAGLVELPGY 80
+++K+FERAL + ++TP RW+ +A+ V KS+ +V+R YD LV DL IE LV LP Y
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74
Query: 81 E 81
+
Sbjct: 75 K 75
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1
SV=1
Length = 93
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 12 ASTSSS---WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLR 68
AST S W+ +E+K FERAL + ++TP RW +AR V G++ +V++ Y+ LV D++
Sbjct: 2 ASTRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIK 61
Query: 69 KIEAGLVELPGY 80
IE+G V P Y
Sbjct: 62 YIESGKVPFPNY 73
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 111 RRKGVPWTAEEHRLFLIGLEKYGKGD---WRSISRNAVVSRTPTQVASHAQ 158
R G PW+A+E++ F L Y K W +++R AV RTP +V H +
Sbjct: 5 RGSGRPWSAKENKAFERALAVYDKDTPDRWANVAR-AVEGRTPEEVKKHYE 54
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
WT EE KL E+AL T+P TP RWE+IA VPG++ D RRY +LV
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELV 600
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 17 SWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV---LDLRKIEAG 73
+W+ ++ +L +A+ FP T RWE IA + SS V+R D++ L+K++
Sbjct: 453 NWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLD-- 510
Query: 74 LVELPGYEDEMDSPG---RVAESGASLGNNSNRSRDR-ETERRKGVPWTAEEHRLFLIGL 129
P +D+++ E G + +S +R E +PWT EE +L L
Sbjct: 511 ----PHQKDDINKKAFDKFKKEHGVAPQADSAAPSERFEGPCIDSIPWTTEEQKLLEQAL 566
Query: 130 EKY 132
+ Y
Sbjct: 567 KTY 569
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 1 MIHNKIDYSYSASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRY 60
M + D + S +++WT EE KL E+AL T+P T RWERI+ VPG+S D +RY
Sbjct: 536 MPSERFDAVGADSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRY 595
Query: 61 DDLV 64
+LV
Sbjct: 596 KELV 599
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 38/136 (27%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV---LDLRKIEAGL 74
W+ E+ +L +A+ FP T RWE IA + SS V+R D++ L+K++
Sbjct: 450 WSEEDLQLLIKAVNLFPAGTNARWEVIANYMNQHSSSGVRRTAKDVINKAKTLQKLD--- 506
Query: 75 VELPGYEDEMDS-------------PGRV-----AESGASLGNNSNRSRDRETERRKGVP 116
P +DE++ P V +E ++G +SN
Sbjct: 507 ---PHQKDEINRKAFEKFKKEHSAVPPTVDNAMPSERFDAVGADSN-----------AAA 552
Query: 117 WTAEEHRLFLIGLEKY 132
WT EE +L L+ Y
Sbjct: 553 WTTEEQKLLEQALKTY 568
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
WT EE KL E+AL T+P TP RWE+IA VPG++ D +RY +LV
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELV 600
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 15 SSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV---LDLRKIE 71
S +W+ ++ +L +A+ FP T RWE IA + SS V+R D++ L+K++
Sbjct: 451 SKNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 72 AGLVELPGYEDEMDSPG----RVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLI 127
P +D+++ + +N+ S E PWT EE +L
Sbjct: 511 ------PHQKDDINKKAFDKFKKEHGVVPQADNAAPSERFEGPYTDFTPWTTEEQKLLEQ 564
Query: 128 GLEKY 132
L+ Y
Sbjct: 565 ALKTY 569
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
WT EE KL E+AL T+P TP RWE+IA VPG++ D +RY +LV
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELV 600
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 15 SSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV---LDLRKIE 71
S W+ ++ +L +A+ FP T RWE IA + SS V+R D++ L+K++
Sbjct: 451 SKHWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 72 AGLVELPGYEDEMDSPG----RVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLI 127
P +D+++ + +N+ S E PWT EE +L
Sbjct: 511 ------PHQKDDINKKAFDKFKKEHGVVPQADNATPSERFEGPCTDFTPWTTEEQKLLEQ 564
Query: 128 GLEKY 132
L+ Y
Sbjct: 565 ALKTY 569
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
WT EE KL E+AL T+P TP RWE+IA VPG++ D +RY +LV
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELV 600
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 15 SSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV---LDLRKIE 71
S +W+ ++ +L +A+ FP T RWE IA + SS V+R D++ L+K++
Sbjct: 451 SKNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 72 AGLVELPGYEDEMDSPG----RVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLI 127
P +D+++ + +N+ S E PWT EE +L
Sbjct: 511 ------PHQKDDINKKAFDKFKKEHGVVPQADNATPSERFEGPYTDFTPWTTEEQKLLEQ 564
Query: 128 GLEKY 132
L+ Y
Sbjct: 565 ALKTY 569
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 105 RDRETERRKGV-PWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR 163
+++++E++K WT EEH F+ L KYG D +SIS+ V +R PTQV +HAQKYFLR
Sbjct: 162 QEKQSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLR 220
Query: 164 MNSVRKDKKRS 174
++ R K S
Sbjct: 221 IDRERGRKLES 231
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 22 EDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAGLVELPGY 80
EDK FE AL F ++TP RW++IAR V GKS+ +V+R Y+ L+ D+ IE+G P Y
Sbjct: 15 EDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRY 73
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 13 STSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
S WT+ + KL E AL +P + RW++IAR VP KS D RY LV
Sbjct: 492 SAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLV 543
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDL 63
WT E+ R++V FP TPGRWE+IA ++ G+S DV + L
Sbjct: 330 WTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQL 374
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 100 NSNRSRDRETERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQK 159
NS +SR T ++ WT EEH+ FL L + + DW+ I + V S+T Q+ SHAQK
Sbjct: 27 NSLKSRKPYTISKQRENWTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQK 84
Query: 160 YFLRM 164
YF+++
Sbjct: 85 YFIKV 89
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 13 STSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLV 64
+ +WT+ + KL E AL +P+ RW++IA+ VP KS D RY LV
Sbjct: 490 AAEEAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLV 541
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDL 63
WT E+ R++V FP TPGRW++IA ++ G+S DV + +L
Sbjct: 328 WTEEDLSQLTRSMVKFPGGTPGRWDKIAHEL-GRSVTDVTTKAKEL 372
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRM 164
WT EEH F+ L YG+ W+ I + V ++T Q+ SHAQK+F ++
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSKV 72
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRM 164
WT +EH FL L + + DW+ I + V S+T Q+ SHAQKYFL++
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKV 109
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMN 165
WT+ E +L L +E++G G+W ++ + SRTPT+V H ++ N
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYIHGN 118
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRM 164
WT +EH FL L YG+ W+ I + + ++T Q+ SHAQK+F ++
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72
>sp|P34454|YMA9_CAEEL Uncharacterized protein F54F2.9 OS=Caenorhabditis elegans
GN=F54F2.9 PE=4 SV=3
Length = 414
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 18 WTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRK 69
W++ E K FE AL +P+ T RWERI+ ++ K+ V R+ L +RK
Sbjct: 357 WSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQLAEMIRK 408
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 115 VPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYF 161
V WT EE LF GL K+G+ W IS+ + SRT QV S+A++YF
Sbjct: 119 VKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 1 MIHNKIDYSYSASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQ 57
M+H+ + AS S WT EE +LFE+ L F RW +I++ + ++ + V+
Sbjct: 107 MVHSP---TKPASYSVKWTIEEKELFEQGLAKFGR----RWTKISKLIGSRTVLQVK 156
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSI 176
WT+ E +L L +E++G G+W ++ + SRTP +V H ++ N ++ I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNL-----GKACI 124
Query: 177 HDIT---TVDAAGSSSQSYDPSWVGPL 200
D D S PS PL
Sbjct: 125 PDTIPNRVTDHTCPSGGPLSPSLTTPL 151
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSI 176
WT+ E +L L +E++G G+W ++ + SRTP +V H ++ N ++ I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNL-----GKACI 124
Query: 177 HDIT---TVDAAGSSSQSYDPSWVGPL 200
D D S PS PL
Sbjct: 125 PDTIPNRVTDHTCPSGGPLSPSLTTPL 151
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 115 VPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYF 161
+ WT+EE LF GL KYG+ W I++ + SRT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGR-RWTKIAK-LIGSRTVLQVKSYARQYF 164
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 13 STSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQ 57
S S WT EE +LFE+ LV + RW +IA+ + ++ + V+
Sbjct: 117 SYSLKWTSEEKELFEQGLVKYGR----RWTKIAKLIGSRTVLQVK 157
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSI 176
WT+ E + L +E+YG G+W ++ + SRTP +V H ++ N + S
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYIHGNLGKACIPDSIP 129
Query: 177 HDITTVDAAGSSSQSYDPSWVGPL 200
+ +T D S PS PL
Sbjct: 130 NRVT--DHTCPSGGPLSPSLTTPL 151
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 115 VPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRS 174
V WT EE LF GL K+G+ W I+ + SRT QV S+A++YF N V+ D ++
Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF--KNKVKWDVEKE 171
Query: 175 S 175
+
Sbjct: 172 T 172
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 12 ASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQ 57
AS S WT EE +LFE+ L F RW +IA + ++ + V+
Sbjct: 112 ASHSVKWTVEEKELFEQGLAKFGR----RWTKIATLLKSRTVLQVK 153
>sp|Q0JIC2|GAM1_ORYSJ Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1
PE=2 SV=1
Length = 553
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 80 YEDEMDSPGRVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLIGLEKYGKGDWRS 139
++++MDSP VA+ G+S G+ R +KG PWT+ E + + ++K+G+G+W +
Sbjct: 14 HQEQMDSP--VADDGSSGGS---PHRGGGPPLKKG-PWTSAEDAILVDYVKKHGEGNWNA 67
Query: 140 ISRNAVVSRT 149
+ +N + R
Sbjct: 68 VQKNTGLFRC 77
>sp|A2WW87|GAM1_ORYSI Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1
PE=2 SV=1
Length = 553
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 80 YEDEMDSPGRVAESGASLGNNSNRSRDRETERRKGVPWTAEEHRLFLIGLEKYGKGDWRS 139
++++MDSP VA+ G+S G+ R +KG PWT+ E + + ++K+G+G+W +
Sbjct: 14 HQEQMDSP--VADDGSSGGS---PHRGGGPPLKKG-PWTSAEDAILVDYVKKHGEGNWNA 67
Query: 140 ISRNAVVSRT 149
+ +N + R
Sbjct: 68 VQKNTGLFRC 77
>sp|P81391|MYB05_ANTMA Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1
Length = 205
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 107 RETERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MN 165
++ E RKG PWT EE + + + +G+G W S++R+A + RT + LR +N
Sbjct: 9 QDVEVRKG-PWTMEEDLILINYIANHGEGVWNSLARSAGLKRT-------GKSCRLRWLN 60
Query: 166 SVRKDKKRSSI 176
+R D +R +I
Sbjct: 61 YLRPDVRRGNI 71
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 66 DLRKIEAGLVELPGYEDEMDSPGRVAESGASLGNNSNRSRDRETE-----RRKGVPWTAE 120
D++ I E ++ + AE GA N+S + D T R KG WTA
Sbjct: 19 DIQGIRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGTSILSVFRGKGA-WTAR 77
Query: 121 EHRLFLIGLEKYGKGDWRSISRN 143
E L +E+YG G+W IS++
Sbjct: 78 EEIRLLDAIEQYGFGNWEDISKH 100
>sp|P81396|MYB40_ANTMA Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1
Length = 198
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Query: 108 ETERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MNS 166
+ E RKG PWT EE + + + +G+G W +I+R+A + RT + LR +N
Sbjct: 10 DVEVRKG-PWTMEEDLILINFISNHGEGVWNTIARSAGLKRT-------GKSCRLRWLNY 61
Query: 167 VRKDKKRSSI 176
+R D +R +I
Sbjct: 62 LRPDVRRGNI 71
>sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2 SV=1
Length = 399
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MNSVRKDKKRSS 175
WTAEE +L + ++G+G WRS+ +NA + R + LR +N +R D KR +
Sbjct: 17 WTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRC-------GKSCRLRWINYLRADVKRGN 69
Query: 176 I 176
I
Sbjct: 70 I 70
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 37.4 bits (85), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 115 VPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYF 161
V WT EE LF GL +G+ W SI+R + SR+ QV ++A+ YF
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYF 154
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 11 SASTSSSWTREEDKLFERALVTFPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKI 70
++S+ WT+EE LFE+ L TF RW IAR + +S + V+ + K+
Sbjct: 105 ASSSPVKWTKEEKNLFEQGLATFGR----RWTSIARLIGSRSVLQVKNYARHYFKNKCKL 160
Query: 71 EA--------GLVELPGYEDEMDSP 87
E G +++P +D + P
Sbjct: 161 EGFVKEEAKIGSLQIPNLQDYENEP 185
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 106 DRETERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRN-AVVSRTPTQV 153
D T K WT EE G++KYG+G+W +IS+N V+RT +
Sbjct: 439 DSTTNITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMI 487
>sp|Q9LK95|MYB21_ARATH Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1
SV=1
Length = 226
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 108 ETERRKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MNS 166
E E RKG PWT EE + + + +G G W S++++A + RT + LR +N
Sbjct: 17 EAEVRKG-PWTMEEDLILINYIANHGDGVWNSLAKSAGLKRT-------GKSCRLRWLNY 68
Query: 167 VRKDKKRSSI 176
+R D +R +I
Sbjct: 69 LRPDVRRGNI 78
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 36.6 bits (83), Expect = 0.15, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 16/84 (19%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNSVRKDKKRSSI 176
WT+EEH FL ++++G D+ +I++ V +R QV +H Y K++K++
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYL-------KNQKKA-- 706
Query: 177 HDITTVDAAGSSSQSYDPSWVGPL 200
+AA SS+Q P P+
Sbjct: 707 ------EAATSSTQVSTPQQQLPI 724
>sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4
PE=2 SV=2
Length = 257
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 112 RKGVPWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MNSVRKD 170
+KG PWT EE ++ + ++++G G+WR++ + A + R + LR +N +R D
Sbjct: 13 KKG-PWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRC-------GKSCRLRWINYLRPD 64
Query: 171 KKRSSI 176
KR +
Sbjct: 65 IKRGNF 70
>sp|O22264|MYB12_ARATH Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2
SV=1
Length = 371
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MNSVRKDKKRSS 175
WTAEE ++ ++ G+G WRS+ +NA + R + LR +N +R D KR +
Sbjct: 17 WTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRC-------GKSCRLRWINYLRSDLKRGN 69
Query: 176 I 176
I
Sbjct: 70 I 70
>sp|Q96X45|EF2_NEUCR Elongation factor 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cot-3
PE=3 SV=3
Length = 844
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 33 FPEETPGRWERIARQVPGKSSVDVQRRYDDLVLDLRKIEAGLVELPGYEDEMD 85
FP+ WER+ PG S +D + +V ++RK + VE+PGYE+ D
Sbjct: 794 FPQSVFDHWERL----PGGSPLDSTSKVGQIVQEMRKRKGLKVEVPGYENYYD 842
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 95 ASLGNNSNRSRDRETERRKGVPWTAEEHRLFLIGLEKYGKGDW---RSISRNAVVSRTPT 151
+S + +NR + E +R+ V WT E HR F+ +E+ G R + V T
Sbjct: 136 SSASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRH 195
Query: 152 QVASHAQKY 160
VASH QKY
Sbjct: 196 NVASHLQKY 204
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRN 143
WTAEE L G+ K+G G W++I R+
Sbjct: 8 WTAEEEEALLAGIRKHGPGKWKNILRD 34
>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica
GN=ADA2 PE=2 SV=2
Length = 567
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRMNS 166
W A+E L L G+E YG G+W ++ + V ++T Q H + MNS
Sbjct: 111 WNADEEILLLEGIEMYGLGNWAEVAEH-VGTKTKAQCIDHYTTAY--MNS 157
>sp|Q9S9K9|MYB3_ARATH Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1
Length = 257
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 117 WTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKYFLR-MNSVRKDKKRSS 175
WT EE +L + + K+G+G WRS+ R A + R + LR MN +R D KR +
Sbjct: 17 WTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRC-------GKSCRLRWMNYLRPDLKRGN 69
Query: 176 I 176
Sbjct: 70 F 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,082,492
Number of Sequences: 539616
Number of extensions: 3636249
Number of successful extensions: 7472
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 7340
Number of HSP's gapped (non-prelim): 209
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)