Query         026857
Match_columns 232
No_of_seqs    164 out of 220
Neff          5.1 
Searched_HMMs 13730
Date          Mon Mar 25 23:55:24 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026857.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026857hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wgea1 g.41.17.1 (A:8-77) Del  93.9   0.011 7.9E-07   41.2   1.9   46   31-85      7-55  (70)
  2 d1vd4a_ g.41.3.1 (A:) Transcri  93.0   0.019 1.4E-06   39.0   1.9   40   40-86      8-50  (62)
  3 d2drpa2 g.37.1.1 (A:140-165) T  92.2   0.016 1.1E-06   32.4   0.4   20   47-66      2-22  (26)
  4 d1ywsa1 g.41.17.1 (A:1-82) Dip  91.8   0.024 1.7E-06   40.5   1.2   47   30-85      5-54  (82)
  5 d2c2la2 g.44.1.2 (A:225-304) S  91.7   0.055   4E-06   37.1   3.0   39   42-86      3-53  (80)
  6 d1yuja_ g.37.1.1 (A:) GAGA fac  89.8   0.053 3.9E-06   35.1   1.3   23   75-97     24-48  (54)
  7 d1wgma_ g.44.1.2 (A:) Ubiquiti  88.2    0.22 1.6E-05   35.5   4.0   46   41-86     17-68  (98)
  8 d1t1ha_ g.44.1.2 (A:) E3 ubiqu  87.7   0.073 5.3E-06   36.2   0.9   44   42-85      4-53  (78)
  9 d1wira_ g.37.1.5 (A:) Protein   85.5    0.25 1.8E-05   37.2   3.0   35   42-76     11-46  (121)
 10 d1klra_ g.37.1.1 (A:) ZFY {Hum  85.1    0.19 1.4E-05   28.9   1.7   27   46-72      2-29  (30)
 11 d1bora_ g.44.1.1 (A:) Acute pr  84.1    0.26 1.9E-05   31.8   2.2   42   45-86      5-48  (56)
 12 d2ct1a1 g.37.1.1 (A:44-71) Tra  83.5    0.22 1.6E-05   28.2   1.4   22   77-98      4-27  (28)
 13 d2ct1a2 g.37.1.1 (A:8-43) Tran  83.3    0.23 1.6E-05   29.7   1.5   26   46-71      8-34  (36)
 14 d2csha1 g.37.1.1 (A:8-60) Zinc  82.2     0.4 2.9E-05   30.0   2.5   46   46-94      3-51  (53)
 15 d2ghfa2 g.37.1.1 (A:9-44) Zinc  80.2     0.3 2.2E-05   29.1   1.2   25   46-70     10-35  (36)
 16 d1bboa1 g.37.1.1 (A:1-28) Enha  80.1    0.48 3.5E-05   26.9   2.0   21   47-67      2-23  (28)
 17 d2ctda2 g.37.1.1 (A:61-90) Zin  79.8    0.62 4.5E-05   26.6   2.5   26   46-71      2-28  (30)
 18 d2adra1 g.37.1.1 (A:102-130) A  79.6    0.47 3.4E-05   27.0   1.9   20   46-65      2-22  (29)
 19 d2dlqa2 g.37.1.1 (A:35-62) GLI  78.1    0.63 4.6E-05   26.1   2.1   19   47-65      2-21  (28)
 20 d6rxna_ g.41.5.1 (A:) Rubredox  77.8    0.37 2.7E-05   30.4   1.1   14   41-54     24-37  (45)
 21 d1wiia_ g.41.3.4 (A:) Hypothet  77.2     0.4 2.9E-05   34.1   1.4   37   43-84     20-56  (85)
 22 d1ur6b_ g.44.1.1 (B:) Not-4 N-  75.4    0.49 3.6E-05   29.7   1.3   15   73-87     37-51  (52)
 23 d2ct5a1 g.37.1.6 (A:8-67) Zinc  74.4    0.52 3.8E-05   31.4   1.2   30   72-101    19-53  (60)
 24 d2cota2 g.37.1.1 (A:7-44) Zinc  74.0    0.82   6E-05   27.2   2.0   20   46-65     12-32  (38)
 25 d2ct1a1 g.37.1.1 (A:44-71) Tra  73.4    0.83   6E-05   25.7   1.8   26   46-71      2-28  (28)
 26 d1nnqa2 g.41.5.1 (A:135-171) R  71.3       1 7.5E-05   27.1   2.0   28   43-84      2-29  (37)
 27 d2epsa1 g.37.1.1 (A:408-446) P  69.9     1.4  0.0001   26.5   2.4   34   46-80      5-39  (39)
 28 d1x5wa2 g.37.1.1 (A:36-64) Zin  69.2    0.66 4.8E-05   26.5   0.7   25   46-70      2-27  (29)
 29 d1sp1a_ g.37.1.1 (A:) Transcri  64.6     1.5 0.00011   24.7   1.7   21   46-66      2-23  (29)
 30 d1p91a_ c.66.1.33 (A:) rRNA me  61.3     1.3 9.3E-05   35.8   1.3   13   46-58      1-13  (268)
 31 d2akla2 g.41.3.5 (A:3-40) Hypo  60.3     1.8 0.00013   26.3   1.5   23   48-83      5-28  (38)
 32 d1yuza2 g.41.5.1 (A:167-202) N  60.3     2.2 0.00016   25.4   1.9   26   45-84      4-29  (36)
 33 d1p7aa_ g.37.1.1 (A:) Kruppel-  58.3     2.8  0.0002   24.6   2.2   20   46-65     11-31  (37)
 34 d1sp2a_ g.37.1.1 (A:) Transcri  57.4     4.1  0.0003   23.1   2.7   24   47-71      3-29  (31)
 35 d1x6ea1 g.37.1.1 (A:8-40) Zinc  57.0     1.6 0.00012   25.3   0.9   20   46-65      7-27  (33)
 36 d2adra2 g.37.1.1 (A:131-161) A  55.8     2.9 0.00021   24.0   1.8   25   47-71      2-27  (31)
 37 d1iyma_ g.44.1.1 (A:) EL5 RING  55.6       2 0.00015   27.1   1.3   37   47-85      6-53  (55)
 38 d2dsxa1 g.41.5.1 (A:1-52) Rubr  55.6     2.1 0.00015   27.5   1.3   14   41-54     31-44  (52)
 39 d1vqoz1 g.41.8.1 (Z:10-82) Rib  55.2     1.8 0.00013   29.7   1.0   16   42-57     23-39  (73)
 40 d1iroa_ g.41.5.1 (A:) Rubredox  54.9     2.1 0.00016   27.5   1.3   14   41-54     31-44  (53)
 41 d2dlka2 g.37.1.1 (A:38-73) Zin  54.5     2.1 0.00015   25.2   1.1   32   46-79      1-35  (36)
 42 d2glia5 g.37.1.1 (A:229-257) F  53.4     2.8  0.0002   23.9   1.4   23   47-69      3-28  (29)
 43 d1brfa_ g.41.5.1 (A:) Rubredox  53.4     2.3 0.00017   27.3   1.3   14   41-54     30-43  (53)
 44 d1srka_ g.37.1.1 (A:) Zinc fin  53.0     4.1  0.0003   23.8   2.3   25   46-71      7-32  (35)
 45 d1k2fa_ b.8.1.2 (A:) SIAH, sev  52.7     5.2 0.00038   31.0   3.6   53   46-99      3-62  (190)
 46 d1jj2y_ g.41.8.1 (Y:) Ribosoma  52.7     2.2 0.00016   29.3   1.1   15   43-57     24-39  (73)
 47 d1s24a_ g.41.5.1 (A:) Two-iron  52.1     2.4 0.00017   27.6   1.1   14   41-54     32-45  (56)
 48 d2czra1 c.52.4.1 (A:1-218) TBP  51.8     1.4  0.0001   35.3  -0.1   29   42-71    142-170 (218)
 49 d1a1ia2 g.37.1.1 (A:132-159) Z  51.6       3 0.00022   23.3   1.4   19   47-65      4-23  (28)
 50 d1wjpa2 g.37.1.1 (A:43-66) Zin  51.5     2.9 0.00021   22.9   1.3   15   48-62      2-16  (26)
 51 d1x6ha2 g.37.1.1 (A:8-43) Tran  51.3     2.8  0.0002   24.5   1.3   24   46-69      8-32  (36)
 52 d1vyxa_ g.44.1.3 (A:) IE1B pro  50.5     1.4  0.0001   27.9  -0.2   11   74-84     46-56  (60)
 53 d2glia3 g.37.1.1 (A:168-197) F  50.2     4.4 0.00032   22.9   2.0   19   47-65      3-24  (30)
 54 d1fbva4 g.44.1.1 (A:356-434) C  44.6     1.4  0.0001   29.7  -1.0   40   47-86     24-69  (79)
 55 d1ubdc3 g.37.1.1 (C:351-380) Y  41.9     5.4  0.0004   22.4   1.5   20   47-66      3-25  (30)
 56 d1ubdc4 g.37.1.1 (C:381-408) Y  40.9     5.1 0.00037   22.4   1.2   19   47-65      3-24  (28)
 57 d1dx8a_ g.41.5.1 (A:) Rubredox  40.7     4.7 0.00034   27.2   1.3   14   41-54     35-48  (70)
 58 d2f2ab2 d.128.1.5 (B:4-293) As  39.6     4.3 0.00031   34.4   1.1   23   64-86     21-43  (290)
 59 d1zfda_ g.37.1.1 (A:) SWI5 zin  39.3     7.5 0.00055   22.2   1.9   20   46-65      3-25  (32)
 60 d1a1ia1 g.37.1.1 (A:103-131) Z  38.3     6.9  0.0005   21.9   1.5   19   47-65      3-24  (29)
 61 d1njqa_ g.37.1.3 (A:) SUPERMAN  36.8     4.4 0.00032   24.3   0.5   20   46-65      5-25  (37)
 62 d1wira_ g.37.1.5 (A:) Protein   36.6     8.5 0.00062   28.3   2.3   34   70-103    10-45  (121)
 63 d1jm7b_ g.44.1.1 (B:) bard1 RI  36.5     6.2 0.00045   27.0   1.4   40   46-85     22-65  (97)
 64 d1pg5b2 g.41.7.1 (B:105-160) A  36.2     3.5 0.00026   26.6  -0.0   22   44-65     33-54  (56)
 65 d1g25a_ g.44.1.1 (A:) TFIIH Ma  34.4     1.5 0.00011   28.4  -2.1   13   75-87     43-55  (65)
 66 d2dmda1 g.37.1.1 (A:34-61) Zin  34.3       8 0.00058   21.4   1.3   21   46-66      3-24  (28)
 67 d1dl6a_ g.41.3.1 (A:) Transcri  34.3     5.9 0.00043   25.6   0.9   38   43-91      8-46  (58)
 68 d2epqa1 g.37.1.1 (A:380-411) P  34.1     3.5 0.00025   23.6  -0.3   13   47-59      4-16  (32)
 69 d1ibia2 g.39.1.3 (A:145-175) C  32.6     5.2 0.00038   22.8   0.3   15   47-61      1-15  (31)
 70 d1x6ea2 g.37.1.1 (A:41-66) Zin  31.2     9.8 0.00072   20.8   1.4   19   47-65      3-22  (26)
 71 d2baya1 g.44.1.2 (A:1-56) Pre-  30.6     8.3 0.00061   23.9   1.1   33   48-87     15-47  (56)
 72 d2dmda3 g.37.1.1 (A:62-90) Zin  30.5      11  0.0008   21.0   1.5   21   46-66      3-24  (29)
 73 d1pfta_ g.41.3.1 (A:) Transcri  29.9       6 0.00044   24.7   0.3   36   46-91      5-40  (50)
 74 d1eeja1 c.47.1.9 (A:61-216) Di  29.3     3.1 0.00023   30.7  -1.4   16   46-61     35-51  (156)
 75 d2jnya1 b.171.1.1 (A:1-59) Unc  27.8      12  0.0009   24.0   1.7   31   42-83      6-36  (59)
 76 d2ghfa1 g.37.1.1 (A:45-102) Zi  27.8      13 0.00094   24.2   1.7   32   44-75      4-36  (58)
 77 d1t3ba1 c.47.1.9 (A:61-210) Di  27.6     3.5 0.00025   30.3  -1.4   18   45-62     34-52  (150)
 78 d2ct7a1 g.44.1.4 (A:8-80) Ring  27.1      19  0.0014   23.3   2.6   30   44-84     16-45  (73)
 79 d1kf6b2 d.15.4.2 (B:1-105) Fum  25.6     8.6 0.00062   27.4   0.5   40   45-85     24-69  (105)
 80 d1fvka_ c.47.1.13 (A:) Disulfi  25.4     4.1  0.0003   29.9  -1.4    9   46-54     27-35  (188)
 81 d2dmda2 g.37.1.1 (A:8-33) Zinc  24.9      12  0.0009   20.3   1.0   18   48-65      3-21  (26)
 82 d1vzya2 g.81.1.1 (A:234-290) H  24.4      10 0.00073   23.9   0.6   21   43-63     29-51  (57)
 83 d1e7la2 d.4.1.5 (A:1-103) Reco  24.2     7.3 0.00053   28.0  -0.1   42   45-86     19-66  (103)
 84 d2ctda1 g.37.1.1 (A:8-60) Zinc  23.9      17  0.0013   22.9   1.7   22   45-66     26-49  (53)
 85 d1ncsa_ g.37.1.1 (A:) SWI5 zin  23.3     9.8 0.00072   23.3   0.4   21   45-65     17-40  (47)
 86 d2j9ub1 g.41.11.1 (B:115-161)   22.6      11  0.0008   23.5   0.5    9   75-83      3-11  (47)
 87 d1vq0a2 g.81.1.1 (A:231-287) H  22.0      13 0.00096   23.4   0.9   20   44-63     28-49  (57)
 88 d1beda_ c.47.1.13 (A:) Disulfi  21.0     5.5  0.0004   28.7  -1.4   10   45-54     26-35  (181)
 89 d2yrka1 g.37.1.4 (A:8-55) Zinc  20.9      14   0.001   23.1   0.7   18   48-65      8-26  (48)
 90 d2dlqa3 g.37.1.1 (A:63-92) GLI  20.9      23  0.0017   19.7   1.6   22   45-66      3-25  (30)
 91 d1chca_ g.44.1.1 (A:) Immediat  20.8      10 0.00075   24.2   0.1   10   76-85     41-50  (68)

No 1  
>d1wgea1 g.41.17.1 (A:8-77) DelGEF-interacting protein 1, DelGIP1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.95  E-value=0.011  Score=41.25  Aligned_cols=46  Identities=30%  Similarity=0.738  Sum_probs=30.3

Q ss_pred             ccCCCCCCCCCC-CCCcccCCCCCC--CccHHHHhhhhccccCCCCCceecCCcccch
Q 026857           31 RLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV   85 (232)
Q Consensus        31 ~~~~e~~~~ddd-~~~~F~CPfC~e--~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v   85 (232)
                      .+.+||++-|+| ..-+|+|| ||.  .+....|-++        .-.+.||-|+-.+
T Consensus         7 ev~leD~~~dee~~~~~ypCp-CGd~F~it~~dLe~g--------e~V~~C~sCSL~i   55 (70)
T d1wgea1           7 EVEIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLII   55 (70)
T ss_dssp             EEEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEE
T ss_pred             EEEeeeeeEeCCCCEEEeCCC-CCCeEEECHHHHhCC--------CeEEeCCCCceEE
Confidence            345666665443 34689999 999  5555666543        2246699999876


No 2  
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.01  E-value=0.019  Score=39.01  Aligned_cols=40  Identities=25%  Similarity=0.661  Sum_probs=30.3

Q ss_pred             CCCCCCcccCCCCCC---CccHHHHhhhhccccCCCCCceecCCcccchh
Q 026857           40 EDDVRPDFPCPYCYE---DFDIASLCSHLEDEHSCESKVTVCPICSVKVA   86 (232)
Q Consensus        40 ddd~~~~F~CPfC~e---~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v~   86 (232)
                      +.--++.|.||.|+.   .+|+..|.+..       ...-+|-+|...|-
T Consensus         8 d~~~~~~y~Cp~C~~~ys~Lda~~L~d~~-------~~~F~C~~C~~el~   50 (62)
T d1vd4a_           8 DSTNRASFKCPVCSSTFTDLEANQLFDPM-------TGTFRCTFCHTEVE   50 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHHHEETT-------TTEEBCSSSCCBCE
T ss_pred             ccccCCceECCCCCCCcchhhHHHhcCcC-------CCeEEecCCCCEEe
Confidence            334488999999998   77888887643       45678999988763


No 3  
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=92.18  E-value=0.016  Score=32.45  Aligned_cols=20  Identities=30%  Similarity=1.246  Sum_probs=11.6

Q ss_pred             ccCCCCCCCccHH-HHhhhhc
Q 026857           47 FPCPYCYEDFDIA-SLCSHLE   66 (232)
Q Consensus        47 F~CPfC~e~~d~~-~L~~H~~   66 (232)
                      |+||||.++|... .+..|+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            6777777766543 2344443


No 4  
>d1ywsa1 g.41.17.1 (A:1-82) Diphthamide biosynthesis protein 3, DPH3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.80  E-value=0.024  Score=40.54  Aligned_cols=47  Identities=32%  Similarity=0.779  Sum_probs=30.5

Q ss_pred             cccCCCCCCCCCC-CCCcccCCCCCC--CccHHHHhhhhccccCCCCCceecCCcccch
Q 026857           30 DRLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV   85 (232)
Q Consensus        30 ~~~~~e~~~~ddd-~~~~F~CPfC~e--~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v   85 (232)
                      +-+.+||++-|+| ..-+|+|| ||.  .+....|..+        .-.+.||-|+-.+
T Consensus         5 dev~LeDm~~ded~~~~~ypCr-CGd~F~it~~dLe~g--------e~v~~C~sCSL~I   54 (82)
T d1ywsa1           5 DEIEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMI   54 (82)
T ss_dssp             CEEETTTSEEETTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEEETTTTEEE
T ss_pred             cEEEecceEEeCCCCEEEeccc-cCCeEEEcHHHHhCC--------CeEEeCCCCceEE
Confidence            3455677664433 34579999 998  4555555542        1245699999976


No 5  
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.69  E-value=0.055  Score=37.09  Aligned_cols=39  Identities=15%  Similarity=0.262  Sum_probs=24.6

Q ss_pred             CCCCcccCCCCCC------------CccHHHHhhhhccccCCCCCceecCCcccchh
Q 026857           42 DVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKVA   86 (232)
Q Consensus        42 d~~~~F~CPfC~e------------~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v~   86 (232)
                      |++..|.||.|.+            -|+..-|..++..      ....||+|...+.
T Consensus         3 eiP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~------~~~~cP~c~~~l~   53 (80)
T d2c2la2           3 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQR------VGHFNPVTRSPLT   53 (80)
T ss_dssp             CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHH------TCSSCTTTCCCCC
T ss_pred             CCCccccCcCcCchhhhhcccCCcCeecHHHHHHHHhc------CCccCCCcccccc
Confidence            4566899999965            3344444444432      2347999988753


No 6  
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}
Probab=89.78  E-value=0.053  Score=35.09  Aligned_cols=23  Identities=35%  Similarity=0.892  Sum_probs=19.9

Q ss_pred             ceecCCcccch--hhhhhhhhhccc
Q 026857           75 VTVCPICSVKV--ARDMLSHITLQH   97 (232)
Q Consensus        75 ~vvCPVCa~~v--~~d~i~Hl~~qH   97 (232)
                      .+.||||-+.+  ++|+-+|+-+.|
T Consensus        24 patcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            57899998876  889999998887


No 7  
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.18  E-value=0.22  Score=35.49  Aligned_cols=46  Identities=17%  Similarity=0.094  Sum_probs=25.6

Q ss_pred             CCCCCcccCCCCCC-CccHHHH-hhh-hccccCC---CCCceecCCcccchh
Q 026857           41 DDVRPDFPCPYCYE-DFDIASL-CSH-LEDEHSC---ESKVTVCPICSVKVA   86 (232)
Q Consensus        41 dd~~~~F~CPfC~e-~~d~~~L-~~H-~~~eH~~---e~~~vvCPVCa~~v~   86 (232)
                      .|.+..|.||.|++ =.|-+-+ ++| .-+..+.   -.++..||+|...+.
T Consensus        17 ~~~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~   68 (98)
T d1wgma_          17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT   68 (98)
T ss_dssp             CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred             cCCcHHhCCcCchhHHHHHHhcccccchhhHHHHHHHHHhcCCccccccccc
Confidence            46788999999977 3333333 232 1221110   012457999988764


No 8  
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=87.71  E-value=0.073  Score=36.18  Aligned_cols=44  Identities=16%  Similarity=0.308  Sum_probs=24.5

Q ss_pred             CCCCcccCCCCCCCccH-HHH-hhhhccccCC----CCCceecCCcccch
Q 026857           42 DVRPDFPCPYCYEDFDI-ASL-CSHLEDEHSC----ESKVTVCPICSVKV   85 (232)
Q Consensus        42 d~~~~F~CPfC~e~~d~-~~L-~~H~~~eH~~----e~~~vvCPVCa~~v   85 (232)
                      |.+..|.||.|.+-|.. ..| |.|.-...+.    ..+...||+|...+
T Consensus         4 eiP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l   53 (78)
T d1t1ha_           4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETL   53 (78)
T ss_dssp             CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBC
T ss_pred             CCCccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHCCCCCCcccccC
Confidence            46778999999773222 111 3332222221    23345799998865


No 9  
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.45  E-value=0.25  Score=37.17  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=28.9

Q ss_pred             CCCCcccCCCCCC-CccHHHHhhhhccccCCCCCce
Q 026857           42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVT   76 (232)
Q Consensus        42 d~~~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~v   76 (232)
                      +..+..+|-||.. --++..+..||.+.|.++-..+
T Consensus        11 ~e~~~~~CLFCd~~f~s~~~~l~H~k~~H~FD~~~~   46 (121)
T d1wira_          11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSM   46 (121)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHHH
T ss_pred             CCcccceecccCCccCCHHHHHHHHHHhhCCCHHHH
Confidence            3466788999999 6689999999999999976543


No 10 
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.12  E-value=0.19  Score=28.89  Aligned_cols=27  Identities=33%  Similarity=0.678  Sum_probs=23.4

Q ss_pred             cccCCCCCC-CccHHHHhhhhccccCCC
Q 026857           46 DFPCPYCYE-DFDIASLCSHLEDEHSCE   72 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~~eH~~e   72 (232)
                      -|.|+||.. .-|.+-|-.|+...|.-+
T Consensus         2 py~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccccccccccccchhhhhhhhcccccC
Confidence            378999988 999999999999988654


No 11 
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.06  E-value=0.26  Score=31.85  Aligned_cols=42  Identities=24%  Similarity=0.452  Sum_probs=28.7

Q ss_pred             CcccCCCCCCCccHHHH--hhhhccccCCCCCceecCCcccchh
Q 026857           45 PDFPCPYCYEDFDIASL--CSHLEDEHSCESKVTVCPICSVKVA   86 (232)
Q Consensus        45 ~~F~CPfC~e~~d~~~L--~~H~~~eH~~e~~~vvCPVCa~~v~   86 (232)
                      +.+.||.|.+.+....+  |.|.-=..+.+.....||+|...+.
T Consensus         5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~~~~CP~Cr~~~~   48 (56)
T d1bora_           5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP   48 (56)
T ss_dssp             CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred             CCCCCcccCcccCCCEEecCCCHHhHHHHHcCCCcCcCCCCccc
Confidence            45789999885544332  5666555555667788999987653


No 12 
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.51  E-value=0.22  Score=28.18  Aligned_cols=22  Identities=32%  Similarity=0.688  Sum_probs=15.5

Q ss_pred             ecCCcccch--hhhhhhhhhcccc
Q 026857           77 VCPICSVKV--ARDMLSHITLQHG   98 (232)
Q Consensus        77 vCPVCa~~v--~~d~i~Hl~~qH~   98 (232)
                      -||-|+..+  ..|+-.||...|.
T Consensus         4 qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           4 HCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             cCCcchhheeehhhhhHHhhhccc
Confidence            477777776  4577777777764


No 13 
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.33  E-value=0.23  Score=29.66  Aligned_cols=26  Identities=19%  Similarity=0.501  Sum_probs=20.0

Q ss_pred             cccCCCCCCCcc-HHHHhhhhccccCC
Q 026857           46 DFPCPYCYEDFD-IASLCSHLEDEHSC   71 (232)
Q Consensus        46 ~F~CPfC~e~~d-~~~L~~H~~~eH~~   71 (232)
                      -|.|++|+..|. ...|..|+...|..
T Consensus         8 P~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           8 PYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CEeCCCCcccccchHHHHHHcccccCC
Confidence            599999999554 56788888777753


No 14 
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.23  E-value=0.4  Score=30.01  Aligned_cols=46  Identities=20%  Similarity=0.427  Sum_probs=36.0

Q ss_pred             cccCCCCCC-CccHHHHhhhhccccCCCCCceecCCcccch--hhhhhhhhh
Q 026857           46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHIT   94 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v--~~d~i~Hl~   94 (232)
                      .|+|. ||. =-....|..|. ..|..+ +.-.|++|...-  ..+|..|+.
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~-~~Ht~e-kpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHM-SMHLGL-RPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHH-HHHSCC-CSEECTTTSCEESSSHHHHHHHT
T ss_pred             CCCCC-CCCeECCHHHhHHHh-hccccc-cCCcCCCcCCEecCHHHHHHHHh
Confidence            58996 999 56678899997 578654 567999998863  567888874


No 15 
>d2ghfa2 g.37.1.1 (A:9-44) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.22  E-value=0.3  Score=29.14  Aligned_cols=25  Identities=28%  Similarity=0.678  Sum_probs=23.3

Q ss_pred             cccCCCCCC-CccHHHHhhhhccccC
Q 026857           46 DFPCPYCYE-DFDIASLCSHLEDEHS   70 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~~eH~   70 (232)
                      -|-|-||.. --++.....|++.+|+
T Consensus        10 GyECKYC~f~Tq~LN~Ft~HVD~~HP   35 (36)
T d2ghfa2          10 GYECKYCTFQTPDLNMFTFHVDSEHP   35 (36)
T ss_dssp             SEECSSCSCEESCHHHHHHHHHHHCS
T ss_pred             CeeeeecCccccchhHHHHhhcccCC
Confidence            689999999 8899999999999997


No 16 
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.06  E-value=0.48  Score=26.92  Aligned_cols=21  Identities=19%  Similarity=0.320  Sum_probs=17.4

Q ss_pred             ccCCCCCC-CccHHHHhhhhcc
Q 026857           47 FPCPYCYE-DFDIASLCSHLED   67 (232)
Q Consensus        47 F~CPfC~e-~~d~~~L~~H~~~   67 (232)
                      |.||||+. =-.-+-|..|+..
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRs   23 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRT   23 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHHHHHHH
Confidence            78999999 7778888889853


No 17 
>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.85  E-value=0.62  Score=26.61  Aligned_cols=26  Identities=23%  Similarity=0.404  Sum_probs=22.2

Q ss_pred             cccCCCCCC-CccHHHHhhhhccccCC
Q 026857           46 DFPCPYCYE-DFDIASLCSHLEDEHSC   71 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~~eH~~   71 (232)
                      .|+|+.||+ --...+..-|+..+|..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            699999999 66788899999888864


No 18 
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=79.62  E-value=0.47  Score=26.95  Aligned_cols=20  Identities=30%  Similarity=0.607  Sum_probs=14.3

Q ss_pred             cccCCCCCCCccH-HHHhhhh
Q 026857           46 DFPCPYCYEDFDI-ASLCSHL   65 (232)
Q Consensus        46 ~F~CPfC~e~~d~-~~L~~H~   65 (232)
                      -|.|++|+..|.. ..|..|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~   22 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHY   22 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHH
T ss_pred             cCCCCCCCCCCCCchHccccc
Confidence            3789999996665 4566665


No 19 
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.08  E-value=0.63  Score=26.14  Aligned_cols=19  Identities=37%  Similarity=0.716  Sum_probs=17.5

Q ss_pred             ccCCCCCC-CccHHHHhhhh
Q 026857           47 FPCPYCYE-DFDIASLCSHL   65 (232)
Q Consensus        47 F~CPfC~e-~~d~~~L~~H~   65 (232)
                      |.|+-||+ .|.-.-|.+|-
T Consensus         2 f~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHH
Confidence            89999999 99999999984


No 20 
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=77.76  E-value=0.37  Score=30.41  Aligned_cols=14  Identities=36%  Similarity=0.823  Sum_probs=11.1

Q ss_pred             CCCCCcccCCCCCC
Q 026857           41 DDVRPDFPCPYCYE   54 (232)
Q Consensus        41 dd~~~~F~CPfC~e   54 (232)
                      +|++..|.||.|+.
T Consensus        24 e~LP~dw~CP~C~a   37 (45)
T d6rxna_          24 DQLPDDWCCPVCGV   37 (45)
T ss_dssp             GGSCTTCBCTTTCC
T ss_pred             HHCCCCCCCcCCCC
Confidence            46778888999886


No 21 
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.16  E-value=0.4  Score=34.09  Aligned_cols=37  Identities=19%  Similarity=0.651  Sum_probs=23.6

Q ss_pred             CCCcccCCCCCCCccHHHHhhhhccccCCCCCceecCCcccc
Q 026857           43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK   84 (232)
Q Consensus        43 ~~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~   84 (232)
                      +...|.||||+-+-.+.     +.-+.......+.|-||-..
T Consensus        20 L~t~F~CPfCnh~~sV~-----vk~dkk~~~g~l~C~vCg~~   56 (85)
T d1wiia_          20 LETQFTCPFCNHEKSCD-----VKMDRARNTGVISCTVCLEE   56 (85)
T ss_dssp             CSSCCCCTTTCCSSCEE-----EEEETTTTEEEEEESSSCCE
T ss_pred             CCceEcCCCCCCCCeEE-----EEEEecCCEEEEEEecCCCe
Confidence            45689999998432332     22333444556789999775


No 22 
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.36  E-value=0.49  Score=29.71  Aligned_cols=15  Identities=20%  Similarity=0.603  Sum_probs=10.2

Q ss_pred             CCceecCCcccchhh
Q 026857           73 SKVTVCPICSVKVAR   87 (232)
Q Consensus        73 ~~~vvCPVCa~~v~~   87 (232)
                      ..+..||+|...+..
T Consensus        37 ~~~~~CP~CR~~~~~   51 (52)
T d1ur6b_          37 DENGLCPACRKPYPE   51 (52)
T ss_dssp             TSCCBCTTTCCBCSC
T ss_pred             hcCCCCCccCCcCCC
Confidence            345679999876543


No 23 
>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.40  E-value=0.52  Score=31.41  Aligned_cols=30  Identities=23%  Similarity=0.504  Sum_probs=24.3

Q ss_pred             CCCceecCCcccch-----hhhhhhhhhcccccch
Q 026857           72 ESKVTVCPICSVKV-----ARDMLSHITLQHGHLF  101 (232)
Q Consensus        72 e~~~vvCPVCa~~v-----~~d~i~Hl~~qH~~~~  101 (232)
                      +-..+||-+|...+     +.||..||..+|-..+
T Consensus        19 ~~~~i~C~lC~k~i~~~GNTtNl~~HL~~rHp~ef   53 (60)
T d2ct5a1          19 QWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEF   53 (60)
T ss_dssp             GSSCCEETTTTEECCCCSSTHHHHHHHHHSCHHHH
T ss_pred             eccchHHHHHHHHhcccCCcchHHHHHHhcCHHHH
Confidence            34578999999887     6799999998886554


No 24 
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.01  E-value=0.82  Score=27.19  Aligned_cols=20  Identities=25%  Similarity=0.614  Sum_probs=15.5

Q ss_pred             cccCCCCCCCcc-HHHHhhhh
Q 026857           46 DFPCPYCYEDFD-IASLCSHL   65 (232)
Q Consensus        46 ~F~CPfC~e~~d-~~~L~~H~   65 (232)
                      -|.|+.||+.|. ...|..|.
T Consensus        12 py~C~~CgK~F~~~s~L~~H~   32 (38)
T d2cota2          12 RYKCDECGKSFSHSSDLSKHR   32 (38)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHH
T ss_pred             CEecCCCCceeeCHHHHHHhC
Confidence            699999999665 45677775


No 25 
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.44  E-value=0.83  Score=25.67  Aligned_cols=26  Identities=35%  Similarity=0.594  Sum_probs=21.8

Q ss_pred             cccCCCCCC-CccHHHHhhhhccccCC
Q 026857           46 DFPCPYCYE-DFDIASLCSHLEDEHSC   71 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~~eH~~   71 (232)
                      .|.||.|+. =-.-+.|.-|+..-|.+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhsy   28 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHSY   28 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CccCCcchhheeehhhhhHHhhhcccC
Confidence            588999999 66778899999888864


No 26 
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=71.35  E-value=1  Score=27.09  Aligned_cols=28  Identities=25%  Similarity=0.706  Sum_probs=17.6

Q ss_pred             CCCcccCCCCCCCccHHHHhhhhccccCCCCCceecCCcccc
Q 026857           43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK   84 (232)
Q Consensus        43 ~~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~   84 (232)
                      ....+.||.||.-+          +.   + -.-+||||-+.
T Consensus         2 ~~~~~~C~vCG~i~----------~g---~-~P~~CPvCg~~   29 (37)
T d1nnqa2           2 IKKVYICPICGYTA----------VD---E-APEYCPVCGAP   29 (37)
T ss_dssp             CSCEEECTTTCCEE----------ES---C-CCSBCTTTCCB
T ss_pred             CCcEEECCCCCCEe----------cC---C-CCCcCCCCCCc
Confidence            34578999998621          21   1 12479999764


No 27 
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.91  E-value=1.4  Score=26.54  Aligned_cols=34  Identities=24%  Similarity=0.594  Sum_probs=24.4

Q ss_pred             cccCCCCCCCcc-HHHHhhhhccccCCCCCceecCC
Q 026857           46 DFPCPYCYEDFD-IASLCSHLEDEHSCESKVTVCPI   80 (232)
Q Consensus        46 ~F~CPfC~e~~d-~~~L~~H~~~eH~~e~~~vvCPV   80 (232)
                      -|.|.+||..|. ...|..|++.-|..+ +.-.|.|
T Consensus         5 py~C~~Cgk~F~~~~~L~~H~r~~Ht~e-kpy~C~i   39 (39)
T d2epsa1           5 PYICQSCGKGFSRPDHLNGHIKQVHTSE-RPHKCQV   39 (39)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTSCCC-CCCCSSS
T ss_pred             CccCCCCCCCcCChHHhhccCcCccCCC-cCcCCcC
Confidence            589999999665 456888988888664 4446654


No 28 
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.23  E-value=0.66  Score=26.45  Aligned_cols=25  Identities=32%  Similarity=0.650  Sum_probs=19.4

Q ss_pred             cccCCCCCCC-ccHHHHhhhhccccC
Q 026857           46 DFPCPYCYED-FDIASLCSHLEDEHS   70 (232)
Q Consensus        46 ~F~CPfC~e~-~d~~~L~~H~~~eH~   70 (232)
                      -|.|-||.++ --.+.|-.|+..-|.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            4899999994 455678899887764


No 29 
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.62  E-value=1.5  Score=24.72  Aligned_cols=21  Identities=33%  Similarity=0.774  Sum_probs=14.7

Q ss_pred             cccCCCCCCCccH-HHHhhhhc
Q 026857           46 DFPCPYCYEDFDI-ASLCSHLE   66 (232)
Q Consensus        46 ~F~CPfC~e~~d~-~~L~~H~~   66 (232)
                      -|.|++|+..|.. ..|..|..
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r   23 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIK   23 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHH
T ss_pred             CEECCcCCCeecchHHhhhhcC
Confidence            3889999996654 45667763


No 30 
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=61.35  E-value=1.3  Score=35.83  Aligned_cols=13  Identities=31%  Similarity=0.958  Sum_probs=10.1

Q ss_pred             cccCCCCCCCccH
Q 026857           46 DFPCPYCYEDFDI   58 (232)
Q Consensus        46 ~F~CPfC~e~~d~   58 (232)
                      +|.||.|+..+..
T Consensus         1 sf~CP~C~~~L~~   13 (268)
T d1p91a_           1 SFSCPLCHQPLSR   13 (268)
T ss_dssp             CBBCTTTCCBCEE
T ss_pred             CccCCCCChhhhc
Confidence            5999999986543


No 31 
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=60.33  E-value=1.8  Score=26.28  Aligned_cols=23  Identities=35%  Similarity=1.125  Sum_probs=15.4

Q ss_pred             cCCCCCCCccHHHHhhhhccccCC-CCCceecCCccc
Q 026857           48 PCPYCYEDFDIASLCSHLEDEHSC-ESKVTVCPICSV   83 (232)
Q Consensus        48 ~CPfC~e~~d~~~L~~H~~~eH~~-e~~~vvCPVCa~   83 (232)
                      +||-|+-++             .+ +....|||-|+-
T Consensus         5 ~CP~C~sey-------------tYedg~l~vCPeC~h   28 (38)
T d2akla2           5 PCPQCNSEY-------------TYEDGALLVCPECAH   28 (38)
T ss_dssp             CCTTTCCCC-------------CEECSSSEEETTTTE
T ss_pred             cCCCCCCcc-------------eEcCCCEEECCcccC
Confidence            578776544             33 456689999975


No 32 
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=60.28  E-value=2.2  Score=25.42  Aligned_cols=26  Identities=31%  Similarity=0.644  Sum_probs=16.4

Q ss_pred             CcccCCCCCCCccHHHHhhhhccccCCCCCceecCCcccc
Q 026857           45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK   84 (232)
Q Consensus        45 ~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~   84 (232)
                      ..+.||.||-          +.+.   + -.-+||||-+.
T Consensus         4 ~~~vC~vCGy----------i~~g---~-~Pe~CPvCg~~   29 (36)
T d1yuza2           4 KFHLCPICGY----------IHKG---E-DFEKCPICFRP   29 (36)
T ss_dssp             CEEECSSSCC----------EEES---S-CCSBCTTTCCB
T ss_pred             CEEECCCCCC----------EeeC---C-CCCcCCCCCCc
Confidence            4789999985          2121   1 23479999764


No 33 
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.26  E-value=2.8  Score=24.56  Aligned_cols=20  Identities=35%  Similarity=0.723  Sum_probs=15.4

Q ss_pred             cccCCCCCCCcc-HHHHhhhh
Q 026857           46 DFPCPYCYEDFD-IASLCSHL   65 (232)
Q Consensus        46 ~F~CPfC~e~~d-~~~L~~H~   65 (232)
                      -|.|++|+..|. ...|..|.
T Consensus        11 Py~C~~C~k~F~~~~~L~~H~   31 (37)
T d1p7aa_          11 PFQCPDCDRSFSRSDHLALHR   31 (37)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHH
T ss_pred             CeEeCCCCCEecCHHHHHHHH
Confidence            699999999665 45677775


No 34 
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.42  E-value=4.1  Score=23.10  Aligned_cols=24  Identities=29%  Similarity=0.620  Sum_probs=16.1

Q ss_pred             ccCCC--CCCCc-cHHHHhhhhccccCC
Q 026857           47 FPCPY--CYEDF-DIASLCSHLEDEHSC   71 (232)
Q Consensus        47 F~CPf--C~e~~-d~~~L~~H~~~eH~~   71 (232)
                      |.|||  |+.-| ....|..|.. .|..
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r-~Htg   29 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKR-THTG   29 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHT-TTSC
T ss_pred             CCCcCCCCCcCcCChhHhhhhcC-cccc
Confidence            78865  99955 4556788874 3544


No 35 
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.95  E-value=1.6  Score=25.31  Aligned_cols=20  Identities=25%  Similarity=0.531  Sum_probs=15.2

Q ss_pred             cccCCCCCCCcc-HHHHhhhh
Q 026857           46 DFPCPYCYEDFD-IASLCSHL   65 (232)
Q Consensus        46 ~F~CPfC~e~~d-~~~L~~H~   65 (232)
                      -|.|+.||+.|. ...|..|.
T Consensus         7 py~C~~Cgk~F~~~~~L~~H~   27 (33)
T d1x6ea1           7 PYGCVECGKAFSRSSILVQHQ   27 (33)
T ss_dssp             CEECSSSCCEESSHHHHHHHH
T ss_pred             CeeCCCCCCEeCchHHhHhhc
Confidence            699999999554 56677775


No 36 
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=55.84  E-value=2.9  Score=24.05  Aligned_cols=25  Identities=32%  Similarity=0.639  Sum_probs=19.1

Q ss_pred             ccCCCCCCCccHH-HHhhhhccccCC
Q 026857           47 FPCPYCYEDFDIA-SLCSHLEDEHSC   71 (232)
Q Consensus        47 F~CPfC~e~~d~~-~L~~H~~~eH~~   71 (232)
                      |.|++|+.-|... -|..|.+.-|..
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cccccccchhhHHHHHHHHHHHHhcC
Confidence            7899999966554 457898888864


No 37 
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=55.65  E-value=2  Score=27.05  Aligned_cols=37  Identities=27%  Similarity=0.689  Sum_probs=21.1

Q ss_pred             ccCCCCCCCccHH----HH--hhhhccccCC-----CCCceecCCcccch
Q 026857           47 FPCPYCYEDFDIA----SL--CSHLEDEHSC-----ESKVTVCPICSVKV   85 (232)
Q Consensus        47 F~CPfC~e~~d~~----~L--~~H~~~eH~~-----e~~~vvCPVCa~~v   85 (232)
                      ..||.|.++|+..    .|  |.|.  .|..     =.++..||+|...+
T Consensus         6 ~~C~ICl~~~~~~~~~~~l~~C~H~--Fh~~Ci~~Wl~~~~~CP~CR~~i   53 (55)
T d1iyma_           6 VECAVCLAELEDGEEARFLPRCGHG--FHAECVDMWLGSHSTCPLCRLTV   53 (55)
T ss_dssp             CCCTTTCCCCCTTSCCEECSSSCCE--ECTTHHHHTTTTCCSCSSSCCCS
T ss_pred             CCCeEECccccCCCEEEEeCCCCCc--ccHHHHHHHHHhCCcCCCCCCEe
Confidence            4599998876542    12  4443  2322     12355799998753


No 38 
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=55.61  E-value=2.1  Score=27.51  Aligned_cols=14  Identities=36%  Similarity=0.992  Sum_probs=11.9

Q ss_pred             CCCCCcccCCCCCC
Q 026857           41 DDVRPDFPCPYCYE   54 (232)
Q Consensus        41 dd~~~~F~CPfC~e   54 (232)
                      +|++.+|.||.|+.
T Consensus        31 ~~LP~~w~CP~C~a   44 (52)
T d2dsxa1          31 EDLPDDWACPVCGA   44 (52)
T ss_dssp             GGSCTTCBCTTTCC
T ss_pred             HHCCCCCCCcCCCC
Confidence            45788999999987


No 39 
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=55.21  E-value=1.8  Score=29.72  Aligned_cols=16  Identities=38%  Similarity=0.881  Sum_probs=12.3

Q ss_pred             CCCCcccCCCCCC-Ccc
Q 026857           42 DVRPDFPCPYCYE-DFD   57 (232)
Q Consensus        42 d~~~~F~CPfC~e-~~d   57 (232)
                      .....|+||||+. .+.
T Consensus        23 ~q~~ky~Cp~Cgk~~vk   39 (73)
T d1vqoz1          23 EMNEDHACPNCGEDRVD   39 (73)
T ss_dssp             HHHSCBCCSSSSCSCEE
T ss_pred             HHhCCccCCCCCCceeE
Confidence            3477899999998 443


No 40 
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=54.95  E-value=2.1  Score=27.51  Aligned_cols=14  Identities=36%  Similarity=0.902  Sum_probs=11.9

Q ss_pred             CCCCCcccCCCCCC
Q 026857           41 DDVRPDFPCPYCYE   54 (232)
Q Consensus        41 dd~~~~F~CPfC~e   54 (232)
                      +|++..|.||.|+.
T Consensus        31 ~~LP~dw~CP~C~a   44 (53)
T d1iroa_          31 KDIPDDWVCPLCGV   44 (53)
T ss_dssp             GGSCTTCBCTTTCC
T ss_pred             HHCCCCCCCcCCCC
Confidence            46788999999987


No 41 
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.54  E-value=2.1  Score=25.20  Aligned_cols=32  Identities=28%  Similarity=0.460  Sum_probs=20.9

Q ss_pred             cccCCC--CCC-CccHHHHhhhhccccCCCCCceecC
Q 026857           46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP   79 (232)
Q Consensus        46 ~F~CPf--C~e-~~d~~~L~~H~~~eH~~e~~~vvCP   79 (232)
                      +|.||+  |+. =.....|..|+.. |.. .+.-.|+
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~-Htg-ekpy~C~   35 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICE   35 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCe-eCC-CCCEeCC
Confidence            488988  999 5556678888754 654 3333443


No 42 
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.40  E-value=2.8  Score=23.89  Aligned_cols=23  Identities=30%  Similarity=0.586  Sum_probs=19.0

Q ss_pred             ccCCC--CCC-CccHHHHhhhhcccc
Q 026857           47 FPCPY--CYE-DFDIASLCSHLEDEH   69 (232)
Q Consensus        47 F~CPf--C~e-~~d~~~L~~H~~~eH   69 (232)
                      |.|.+  |++ --|-++|..|+...|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhC
Confidence            56766  888 889999999998776


No 43 
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=53.40  E-value=2.3  Score=27.33  Aligned_cols=14  Identities=29%  Similarity=0.904  Sum_probs=12.0

Q ss_pred             CCCCCcccCCCCCC
Q 026857           41 DDVRPDFPCPYCYE   54 (232)
Q Consensus        41 dd~~~~F~CPfC~e   54 (232)
                      +|++..|.||.|+.
T Consensus        30 ~dLP~dw~CP~C~a   43 (53)
T d1brfa_          30 EELPDDWVCPICGA   43 (53)
T ss_dssp             GGSCTTCBCTTTCC
T ss_pred             HHCCCCCCCcCCCC
Confidence            46788999999987


No 44 
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.03  E-value=4.1  Score=23.78  Aligned_cols=25  Identities=32%  Similarity=0.610  Sum_probs=17.7

Q ss_pred             cccCCCCCCCcc-HHHHhhhhccccCC
Q 026857           46 DFPCPYCYEDFD-IASLCSHLEDEHSC   71 (232)
Q Consensus        46 ~F~CPfC~e~~d-~~~L~~H~~~eH~~   71 (232)
                      -|.|++|++.|. ...|..|+ ..|..
T Consensus         7 Py~C~~C~k~F~~~~~L~~H~-r~Ht~   32 (35)
T d1srka_           7 PFVCRICLSAFTTKANCARHL-KVHTD   32 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-GGGTS
T ss_pred             cccCCCCCCcccChHHHHHHc-cccCC
Confidence            589999999665 45677786 35654


No 45 
>d1k2fa_ b.8.1.2 (A:) SIAH, seven in absentia homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.72  E-value=5.2  Score=31.03  Aligned_cols=53  Identities=23%  Similarity=0.449  Sum_probs=34.4

Q ss_pred             cccCCC----CCCCccHHHHhhhhccccCCCCCceecCC--cccc-hhhhhhhhhhccccc
Q 026857           46 DFPCPY----CYEDFDIASLCSHLEDEHSCESKVTVCPI--CSVK-VARDMLSHITLQHGH   99 (232)
Q Consensus        46 ~F~CPf----C~e~~d~~~L~~H~~~eH~~e~~~vvCPV--Ca~~-v~~d~i~Hl~~qH~~   99 (232)
                      .|||+|    |.+-+....+..|- +.-.+.+..=.||.  |.-. ...++..|+...|..
T Consensus         3 ~~pC~~~~~GC~~~~~~~~~~~HE-~~C~~~p~~C~~~~~~C~~~G~~~~l~~Hl~~~H~~   62 (190)
T d1k2fa_           3 LFPCKYASSGCEITLPHTEKAEHE-ELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS   62 (190)
T ss_dssp             CCCCTTGGGTCCCCCCGGGHHHHH-HTCTTSCEECCSSSTTCCCEECHHHHHHHHHHSSCC
T ss_pred             eEecCCCCCCCCEeccccchhhHH-hcCCCcccCCCCCCCCCccCCCHhHHHHHHHhcCCc
Confidence            578885    88888888888884 44444333333344  6433 356789999888863


No 46 
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=52.67  E-value=2.2  Score=29.32  Aligned_cols=15  Identities=20%  Similarity=0.545  Sum_probs=11.6

Q ss_pred             CCCcccCCCCCC-Ccc
Q 026857           43 VRPDFPCPYCYE-DFD   57 (232)
Q Consensus        43 ~~~~F~CPfC~e-~~d   57 (232)
                      ....|+||||+. .+.
T Consensus        24 q~~ky~Cp~Cgk~~vk   39 (73)
T d1jj2y_          24 HKKKHKCPVCGFKKLK   39 (73)
T ss_dssp             HHSCBCCSSSCCSCEE
T ss_pred             hcCCccCCCCCCCceE
Confidence            467899999997 443


No 47 
>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}
Probab=52.10  E-value=2.4  Score=27.62  Aligned_cols=14  Identities=36%  Similarity=0.902  Sum_probs=12.0

Q ss_pred             CCCCCcccCCCCCC
Q 026857           41 DDVRPDFPCPYCYE   54 (232)
Q Consensus        41 dd~~~~F~CPfC~e   54 (232)
                      +|++..|.||.|+.
T Consensus        32 ~~LP~dw~CP~C~a   45 (56)
T d1s24a_          32 EDIPDDWCCPDCGA   45 (56)
T ss_dssp             GGCCTTCCCSSSCC
T ss_pred             hhCCCCCCCcCCCC
Confidence            46788999999987


No 48 
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=51.77  E-value=1.4  Score=35.35  Aligned_cols=29  Identities=31%  Similarity=0.458  Sum_probs=24.3

Q ss_pred             CCCCcccCCCCCCCccHHHHhhhhccccCC
Q 026857           42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSC   71 (232)
Q Consensus        42 d~~~~F~CPfC~e~~d~~~L~~H~~~eH~~   71 (232)
                      -+++-|+|-.||+-+|+..|..|+. +|-.
T Consensus       142 vFWQFYKCe~CgKYvDie~~~~H~k-~HG~  170 (218)
T d2czra1         142 IFWQFYKCEECGKYVDIENLEAHLR-EHGI  170 (218)
T ss_dssp             EEEEEEECTTTCCEEEGGGHHHHHH-TTTC
T ss_pred             EEEEEeehhhcCceecHHHHHHHHH-HcCc
Confidence            3588899999999999999999984 4543


No 49 
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.60  E-value=3  Score=23.26  Aligned_cols=19  Identities=32%  Similarity=0.884  Sum_probs=12.7

Q ss_pred             ccCCCCCCCccHH-HHhhhh
Q 026857           47 FPCPYCYEDFDIA-SLCSHL   65 (232)
Q Consensus        47 F~CPfC~e~~d~~-~L~~H~   65 (232)
                      |.|+.|+..|... .|..|+
T Consensus         4 y~C~~C~k~F~~~~~L~~H~   23 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHI   23 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCcCEecccccccccC
Confidence            7888888866543 455554


No 50 
>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.54  E-value=2.9  Score=22.91  Aligned_cols=15  Identities=40%  Similarity=0.755  Sum_probs=10.8

Q ss_pred             cCCCCCCCccHHHHh
Q 026857           48 PCPYCYEDFDIASLC   62 (232)
Q Consensus        48 ~CPfC~e~~d~~~L~   62 (232)
                      .||||.--|--.+|.
T Consensus         2 vcpycslrf~sp~lk   16 (26)
T d1wjpa2           2 VCPYCSLRFFSPELK   16 (26)
T ss_dssp             CCTTTCCCBSSHHHH
T ss_pred             CCCcceeeeCCHHHh
Confidence            599998866666653


No 51 
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.30  E-value=2.8  Score=24.47  Aligned_cols=24  Identities=25%  Similarity=0.548  Sum_probs=17.4

Q ss_pred             cccCCCCCCCc-cHHHHhhhhcccc
Q 026857           46 DFPCPYCYEDF-DIASLCSHLEDEH   69 (232)
Q Consensus        46 ~F~CPfC~e~~-d~~~L~~H~~~eH   69 (232)
                      -|.|++|++.| ....|..|+...|
T Consensus         8 Py~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           8 PYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CEECCCCCCCcCCHhHHHHhCcccC
Confidence            69999999955 4566888875433


No 52 
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=50.53  E-value=1.4  Score=27.91  Aligned_cols=11  Identities=45%  Similarity=0.969  Sum_probs=7.7

Q ss_pred             CceecCCcccc
Q 026857           74 KVTVCPICSVK   84 (232)
Q Consensus        74 ~~vvCPVCa~~   84 (232)
                      ++..||+|.+.
T Consensus        46 ~~~~CP~Cr~~   56 (60)
T d1vyxa_          46 RNTACQICGVV   56 (60)
T ss_dssp             TCSBCTTTCCB
T ss_pred             CCCCCcccCCe
Confidence            44579998764


No 53 
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.16  E-value=4.4  Score=22.86  Aligned_cols=19  Identities=26%  Similarity=0.852  Sum_probs=14.4

Q ss_pred             ccCCC--CCCCc-cHHHHhhhh
Q 026857           47 FPCPY--CYEDF-DIASLCSHL   65 (232)
Q Consensus        47 F~CPf--C~e~~-d~~~L~~H~   65 (232)
                      |.|++  |+.-| ....|..|+
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~   24 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHL   24 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHH
T ss_pred             eeCCCCCCCceECChhHhhhhc
Confidence            88999  99955 456677776


No 54 
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.63  E-value=1.4  Score=29.73  Aligned_cols=40  Identities=28%  Similarity=0.544  Sum_probs=21.5

Q ss_pred             ccCCCCCCCcc-HHHH-hhhhccccCC----CCCceecCCcccchh
Q 026857           47 FPCPYCYEDFD-IASL-CSHLEDEHSC----ESKVTVCPICSVKVA   86 (232)
Q Consensus        47 F~CPfC~e~~d-~~~L-~~H~~~eH~~----e~~~vvCPVCa~~v~   86 (232)
                      ..||.|.+.+. ..-| |.|.--..+.    ..+.-.||+|...+.
T Consensus        24 ~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~   69 (79)
T d1fbva4          24 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIK   69 (79)
T ss_dssp             TBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCC
T ss_pred             CCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCcc
Confidence            35999988443 2222 4443211111    223346999988764


No 55 
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.89  E-value=5.4  Score=22.40  Aligned_cols=20  Identities=25%  Similarity=0.454  Sum_probs=14.6

Q ss_pred             ccCCC--CCC-CccHHHHhhhhc
Q 026857           47 FPCPY--CYE-DFDIASLCSHLE   66 (232)
Q Consensus        47 F~CPf--C~e-~~d~~~L~~H~~   66 (232)
                      |.|+|  |+. =-....|..|+.
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHH
T ss_pred             ccCCCCCCCceECcHHHcCcccc
Confidence            78988  999 445566777864


No 56 
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.93  E-value=5.1  Score=22.36  Aligned_cols=19  Identities=37%  Similarity=1.015  Sum_probs=13.3

Q ss_pred             ccCCC--CCCCcc-HHHHhhhh
Q 026857           47 FPCPY--CYEDFD-IASLCSHL   65 (232)
Q Consensus        47 F~CPf--C~e~~d-~~~L~~H~   65 (232)
                      |.||+  |++-|. ...|..|.
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~   24 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHI   24 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHH
T ss_pred             cCCCCCCcCCcCCCHHHHHHHH
Confidence            78988  999554 45566665


No 57 
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=40.65  E-value=4.7  Score=27.22  Aligned_cols=14  Identities=36%  Similarity=0.823  Sum_probs=11.7

Q ss_pred             CCCCCcccCCCCCC
Q 026857           41 DDVRPDFPCPYCYE   54 (232)
Q Consensus        41 dd~~~~F~CPfC~e   54 (232)
                      +|++..+.||.|+.
T Consensus        35 ~dLP~dW~CP~Cga   48 (70)
T d1dx8a_          35 VDLSDSFMCPACRS   48 (70)
T ss_dssp             GGSCTTCBCTTTCC
T ss_pred             HHCCCCCCCcCCCC
Confidence            45678999999987


No 58 
>d2f2ab2 d.128.1.5 (B:4-293) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=39.62  E-value=4.3  Score=34.37  Aligned_cols=23  Identities=9%  Similarity=-0.094  Sum_probs=16.6

Q ss_pred             hhccccCCCCCceecCCcccchh
Q 026857           64 HLEDEHSCESKVTVCPICSVKVA   86 (232)
Q Consensus        64 H~~~eH~~e~~~vvCPVCa~~v~   86 (232)
                      .|..+...+++.-+||||.+.||
T Consensus        21 ~c~~~~~~~pNt~vc~v~lg~PG   43 (290)
T d2f2ab2          21 PSPAHFGAEPNSNTNVIDLAYPG   43 (290)
T ss_dssp             SSBSSCCSSTTCSCCTTTTTCTT
T ss_pred             CCCCcCCCCcccccCccccCCCC
Confidence            34445555788889999999864


No 59 
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.30  E-value=7.5  Score=22.15  Aligned_cols=20  Identities=25%  Similarity=0.511  Sum_probs=14.6

Q ss_pred             cccCCC--CCCCcc-HHHHhhhh
Q 026857           46 DFPCPY--CYEDFD-IASLCSHL   65 (232)
Q Consensus        46 ~F~CPf--C~e~~d-~~~L~~H~   65 (232)
                      -|.|+|  |+.-|. ...|..|.
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~   25 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHK   25 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHH
T ss_pred             CeECcCCCCCCeeCCHHHHHHHh
Confidence            389988  999554 45677775


No 60 
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.25  E-value=6.9  Score=21.85  Aligned_cols=19  Identities=32%  Similarity=0.669  Sum_probs=13.6

Q ss_pred             ccCCC--CCC-CccHHHHhhhh
Q 026857           47 FPCPY--CYE-DFDIASLCSHL   65 (232)
Q Consensus        47 F~CPf--C~e-~~d~~~L~~H~   65 (232)
                      |.|+|  |++ =.....|..|.
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~   24 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHI   24 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHT
T ss_pred             eECCCCCCCcEECchhHhhhhc
Confidence            78988  998 44556677775


No 61 
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=36.77  E-value=4.4  Score=24.26  Aligned_cols=20  Identities=25%  Similarity=0.899  Sum_probs=12.7

Q ss_pred             cccCCCCCCCc-cHHHHhhhh
Q 026857           46 DFPCPYCYEDF-DIASLCSHL   65 (232)
Q Consensus        46 ~F~CPfC~e~~-d~~~L~~H~   65 (232)
                      .|.|.+|+..| +-+.|=-|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~   25 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHM   25 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             ccCCCCCCCccCCcccccchH
Confidence            57777777743 455666664


No 62 
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.62  E-value=8.5  Score=28.31  Aligned_cols=34  Identities=24%  Similarity=0.377  Sum_probs=27.4

Q ss_pred             CCCCCceecCCcccch--hhhhhhhhhcccccchhh
Q 026857           70 SCESKVTVCPICSVKV--ARDMLSHITLQHGHLFKL  103 (232)
Q Consensus        70 ~~e~~~vvCPVCa~~v--~~d~i~Hl~~qH~~~~k~  103 (232)
                      ..+...++|-.|...-  ...++.|+..+|+|-+..
T Consensus        10 ~~e~~~~~CLFCd~~f~s~~~~l~H~k~~H~FD~~~   45 (121)
T d1wira_          10 AHGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS   45 (121)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred             CCCcccceecccCCccCCHHHHHHHHHHhhCCCHHH
Confidence            3467789999998763  468999999999997654


No 63 
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.54  E-value=6.2  Score=26.96  Aligned_cols=40  Identities=23%  Similarity=0.484  Sum_probs=23.0

Q ss_pred             cccCCCCCCCccHH-HH--hhhhccccCCCC-CceecCCcccch
Q 026857           46 DFPCPYCYEDFDIA-SL--CSHLEDEHSCES-KVTVCPICSVKV   85 (232)
Q Consensus        46 ~F~CPfC~e~~d~~-~L--~~H~~~eH~~e~-~~vvCPVCa~~v   85 (232)
                      .+.||.|.+-|... .|  |.|.--..+... -..-||+|...+
T Consensus        22 ~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~   65 (97)
T d1jm7b_          22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPA   65 (97)
T ss_dssp             TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBC
T ss_pred             cCCCccCCchhhcCceeCCCCCchhHHHHHHHHhccccccCCcC
Confidence            67899998865543 23  455443333211 123499997654


No 64 
>d1pg5b2 g.41.7.1 (B:105-160) Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=36.25  E-value=3.5  Score=26.63  Aligned_cols=22  Identities=23%  Similarity=0.496  Sum_probs=19.8

Q ss_pred             CCcccCCCCCCCccHHHHhhhh
Q 026857           44 RPDFPCPYCYEDFDIASLCSHL   65 (232)
Q Consensus        44 ~~~F~CPfC~e~~d~~~L~~H~   65 (232)
                      +-.+.|-||+.-++..++.+++
T Consensus        33 ~~~lrC~YCe~~~~~~~I~~~l   54 (56)
T d1pg5b2          33 PLKMRCEYCETIIDENEIMSQI   54 (56)
T ss_dssp             TTEEEETTTCCEEEHHHHHHHH
T ss_pred             CCEEEeeCCCCEecHHHHHHHh
Confidence            6789999999999999998876


No 65 
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.42  E-value=1.5  Score=28.37  Aligned_cols=13  Identities=23%  Similarity=0.728  Sum_probs=9.5

Q ss_pred             ceecCCcccchhh
Q 026857           75 VTVCPICSVKVAR   87 (232)
Q Consensus        75 ~vvCPVCa~~v~~   87 (232)
                      ...||+|...+..
T Consensus        43 ~~~CP~CR~~i~~   55 (65)
T d1g25a_          43 AGNCPECGTPLRK   55 (65)
T ss_dssp             SSSCTTTCCCCSS
T ss_pred             cCCCCCCCcCccc
Confidence            3469999887643


No 66 
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.34  E-value=8  Score=21.42  Aligned_cols=21  Identities=33%  Similarity=0.558  Sum_probs=18.3

Q ss_pred             cccCCCCCC-CccHHHHhhhhc
Q 026857           46 DFPCPYCYE-DFDIASLCSHLE   66 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~   66 (232)
                      -|+|-+|+- -.|-++|-.|+.
T Consensus         3 p~kck~cdyaaadsssl~kh~r   24 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLR   24 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CcccccccchhcchhhHhhhhh
Confidence            378999988 999999999974


No 67 
>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.33  E-value=5.9  Score=25.58  Aligned_cols=38  Identities=18%  Similarity=0.520  Sum_probs=25.7

Q ss_pred             CCCcccCCCCCC-CccHHHHhhhhccccCCCCCceecCCcccchhhhhhh
Q 026857           43 VRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS   91 (232)
Q Consensus        43 ~~~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v~~d~i~   91 (232)
                      +....+||.|+. ++         ..+  ......||--|-.-+..+++.
T Consensus         8 ~~~~~~Cp~Cgs~~i---------i~D--~~~Ge~vC~~CG~Vlee~~ID   46 (58)
T d1dl6a_           8 ALPRVTCPNHPDAIL---------VED--YRAGDMICPECGLVVGDRVID   46 (58)
T ss_dssp             CCSCCSBTTBSSSCC---------EEC--SSSCCEECTTTCCEECCSCCC
T ss_pred             cccccCCCCCCCCCE---------EEE--CCCCcEecccCCCEecccccc
Confidence            345789999987 42         122  234568999998877666654


No 68 
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.14  E-value=3.5  Score=23.63  Aligned_cols=13  Identities=31%  Similarity=0.835  Sum_probs=6.9

Q ss_pred             ccCCCCCCCccHH
Q 026857           47 FPCPYCYEDFDIA   59 (232)
Q Consensus        47 F~CPfC~e~~d~~   59 (232)
                      |.||.|+.-|...
T Consensus         4 ~~cpic~qrfkrk   16 (32)
T d2epqa1           4 YSCPVCGLRFKRK   16 (32)
T ss_dssp             SEETTTTEECSCH
T ss_pred             cccchHHHHhhcc
Confidence            5566665544443


No 69 
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=32.58  E-value=5.2  Score=22.76  Aligned_cols=15  Identities=27%  Similarity=0.755  Sum_probs=11.6

Q ss_pred             ccCCCCCCCccHHHH
Q 026857           47 FPCPYCYEDFDIASL   61 (232)
Q Consensus        47 F~CPfC~e~~d~~~L   61 (232)
                      |.|..||++++-..|
T Consensus         1 frca~cgk~lestt~   15 (31)
T d1ibia2           1 FRCAKCGKSLESTTL   15 (31)
T ss_dssp             EECSSSCCEECSSCS
T ss_pred             CccccccCcccccee
Confidence            789999998765444


No 70 
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.24  E-value=9.8  Score=20.80  Aligned_cols=19  Identities=26%  Similarity=0.609  Sum_probs=13.8

Q ss_pred             ccCCCCCCCccH-HHHhhhh
Q 026857           47 FPCPYCYEDFDI-ASLCSHL   65 (232)
Q Consensus        47 F~CPfC~e~~d~-~~L~~H~   65 (232)
                      |.|+.||+.|.. ..|..|.
T Consensus         3 y~C~eCgK~F~~~s~L~~Hq   22 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQ   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCc
Confidence            789999996654 4566664


No 71 
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.56  E-value=8.3  Score=23.86  Aligned_cols=33  Identities=18%  Similarity=0.147  Sum_probs=24.1

Q ss_pred             cCCCCCCCccHHHHhhhhccccCCCCCceecCCcccchhh
Q 026857           48 PCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVAR   87 (232)
Q Consensus        48 ~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v~~   87 (232)
                      .-|-||--|+..-+..++...       ..||+|...+..
T Consensus        15 ~~~~cGh~fc~~cI~~~l~~~-------~~CP~c~~~l~~   47 (56)
T d2baya1          15 LSPKSRTIFEKSLLEQYVKDT-------GNDPITNEPLSI   47 (56)
T ss_dssp             EETTTTEEEEHHHHHHHHHHH-------SBCTTTCCBCCG
T ss_pred             ccCCCCCcccHHHHHHHHhhc-------cCCCccCCcCCH
Confidence            346778888888888888642       369999887643


No 72 
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.52  E-value=11  Score=20.98  Aligned_cols=21  Identities=29%  Similarity=0.539  Sum_probs=16.2

Q ss_pred             cccCCCCCC-CccHHHHhhhhc
Q 026857           46 DFPCPYCYE-DFDIASLCSHLE   66 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L~~H~~   66 (232)
                      -|+|-+|.. .-+-+.|.-|+.
T Consensus         3 pfkcqlcsy~srnssqltvhlr   24 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLR   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHT
T ss_pred             cceeeecccccCCchheEEeee
Confidence            478888877 778888888874


No 73 
>d1pfta_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=29.93  E-value=6  Score=24.72  Aligned_cols=36  Identities=22%  Similarity=0.516  Sum_probs=24.4

Q ss_pred             cccCCCCCCCccHHHHhhhhccccCCCCCceecCCcccchhhhhhh
Q 026857           46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS   91 (232)
Q Consensus        46 ~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~v~~d~i~   91 (232)
                      .-.||.|+.. +       +...  .+....||--|-.-+..+++.
T Consensus         5 ~~~Cp~Cgs~-~-------iv~D--~~~Ge~vC~~CG~Viee~~iD   40 (50)
T d1pfta_           5 QKVCPACESA-E-------LIYD--PERGEIVCAKCGYVIEENIID   40 (50)
T ss_dssp             CCSCTTTSCC-C-------EEEE--TTTTEEEESSSCCBCCCCCCC
T ss_pred             cccCcCCCCC-c-------EEEE--CCCCeEecccCCcEecccccc
Confidence            4589999862 1       2222  235589999999888777764


No 74 
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.31  E-value=3.1  Score=30.68  Aligned_cols=16  Identities=31%  Similarity=0.766  Sum_probs=10.8

Q ss_pred             cccCCCCCC-CccHHHH
Q 026857           46 DFPCPYCYE-DFDIASL   61 (232)
Q Consensus        46 ~F~CPfC~e-~~d~~~L   61 (232)
                      .|.||||.. .=.+..|
T Consensus        35 D~~CpyC~~~~~~l~~~   51 (156)
T d1eeja1          35 DITCGYCHKLHEQMADY   51 (156)
T ss_dssp             CTTCHHHHHHHTTHHHH
T ss_pred             CCCCHHHHHHHHHHHHh
Confidence            589999977 4344444


No 75 
>d2jnya1 b.171.1.1 (A:1-59) Uncharacterized protein Cgl1405/cg1592 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=27.83  E-value=12  Score=23.99  Aligned_cols=31  Identities=10%  Similarity=0.130  Sum_probs=19.6

Q ss_pred             CCCCcccCCCCCCCccHHHHhhhhccccCCCCCceecCCccc
Q 026857           42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV   83 (232)
Q Consensus        42 d~~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~   83 (232)
                      ++-....||.|+..+...+           +....||+-|..
T Consensus         6 ~LL~iL~CP~ck~~L~~~~-----------~~~~Lvc~~~~~   36 (59)
T d2jnya1           6 QLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNL   36 (59)
T ss_dssp             GGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred             HHHHHhcCCCCCCEeEEeC-----------CCCEEEcCccCc
Confidence            4556788999987554321           234578887753


No 76 
>d2ghfa1 g.37.1.1 (A:45-102) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.76  E-value=13  Score=24.16  Aligned_cols=32  Identities=19%  Similarity=0.268  Sum_probs=28.0

Q ss_pred             CCcccCCCCCC-CccHHHHhhhhccccCCCCCc
Q 026857           44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKV   75 (232)
Q Consensus        44 ~~~F~CPfC~e-~~d~~~L~~H~~~eH~~e~~~   75 (232)
                      -+.|-|--|++ --+-.+|-.|-...|+.+.+.
T Consensus         4 dPsfvC~~C~f~~k~~e~Ls~HNak~Hpge~nf   36 (58)
T d2ghfa1           4 NSSYVCVECNFLTKRYDALSEHNLKYHPGEENF   36 (58)
T ss_dssp             SCCEEETTTTEEESSTHHHHTHHHHTSTTCCCE
T ss_pred             cCeEEEEEccccccChhHHHhhhcccCCCcceE
Confidence            47899999999 888899999999999987764


No 77 
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=27.63  E-value=3.5  Score=30.33  Aligned_cols=18  Identities=22%  Similarity=0.512  Sum_probs=11.6

Q ss_pred             CcccCCCCCC-CccHHHHh
Q 026857           45 PDFPCPYCYE-DFDIASLC   62 (232)
Q Consensus        45 ~~F~CPfC~e-~~d~~~L~   62 (232)
                      ..|.||||.. .=.+..|.
T Consensus        34 sD~~CPyC~~~~~~l~~l~   52 (150)
T d1t3ba1          34 MDITCHYCHLLHQQLKEYN   52 (150)
T ss_dssp             ECTTCHHHHHHHTTHHHHH
T ss_pred             ECCCCHHHHHHhHHHHHHh
Confidence            3699999977 33344443


No 78 
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.07  E-value=19  Score=23.32  Aligned_cols=30  Identities=23%  Similarity=0.389  Sum_probs=19.7

Q ss_pred             CCcccCCCCCCCccHHHHhhhhccccCCCCCceecCCcccc
Q 026857           44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK   84 (232)
Q Consensus        44 ~~~F~CPfC~e~~d~~~L~~H~~~eH~~e~~~vvCPVCa~~   84 (232)
                      +..-.||.|+..+..           ......++||.|-..
T Consensus        16 ~~~k~CP~C~~~~~~-----------~~~~~~~~C~~C~~~   45 (73)
T d2ct7a1          16 PKFLWCAQCSFGFIY-----------EREQLEATCPQCHQT   45 (73)
T ss_dssp             CCEECCSSSCCCEEC-----------CCSCSCEECTTTCCE
T ss_pred             CCCCCCCCCCCEeEE-----------CCCCCEEEcCCCCCe
Confidence            457789999886532           223456788888654


No 79 
>d1kf6b2 d.15.4.2 (B:1-105) Fumarate reductase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.62  E-value=8.6  Score=27.45  Aligned_cols=40  Identities=15%  Similarity=0.395  Sum_probs=31.9

Q ss_pred             CcccCCCCCCCccHHHHhhhhcccc------CCCCCceecCCcccch
Q 026857           45 PDFPCPYCYEDFDIASLCSHLEDEH------SCESKVTVCPICSVKV   85 (232)
Q Consensus        45 ~~F~CPfC~e~~d~~~L~~H~~~eH------~~e~~~vvCPVCa~~v   85 (232)
                      ++|.+|+ .++..+-.+..++++++      .+..+.++|.-|+.++
T Consensus        24 ~~y~v~~-~~~~tvLd~L~~Ik~~~d~sLsfr~sCr~giCGsCam~I   69 (105)
T d1kf6b2          24 AFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV   69 (105)
T ss_dssp             EEEEEEE-CTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEE
T ss_pred             EEEEEec-CCCCcHHHHHHHHHHhcCCcceEEeccCCCCCCCCeEEE
Confidence            5799998 35788888888887765      3356789999999987


No 80 
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}
Probab=25.38  E-value=4.1  Score=29.91  Aligned_cols=9  Identities=56%  Similarity=1.538  Sum_probs=7.8

Q ss_pred             cccCCCCCC
Q 026857           46 DFPCPYCYE   54 (232)
Q Consensus        46 ~F~CPfC~e   54 (232)
                      .|.||||..
T Consensus        27 dy~Cp~C~~   35 (188)
T d1fvka_          27 SFFCPHCYQ   35 (188)
T ss_dssp             CTTCHHHHH
T ss_pred             CCCChhhHH
Confidence            699999975


No 81 
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.89  E-value=12  Score=20.27  Aligned_cols=18  Identities=28%  Similarity=0.576  Sum_probs=10.7

Q ss_pred             cCCCCCCCccHH-HHhhhh
Q 026857           48 PCPYCYEDFDIA-SLCSHL   65 (232)
Q Consensus        48 ~CPfC~e~~d~~-~L~~H~   65 (232)
                      .|++|++-|... .|--|+
T Consensus         3 kc~~c~kcfsrkdklk~hm   21 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHM   21 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHG
T ss_pred             ccchhhhHhcchhHHHHHh
Confidence            588888766543 344444


No 82 
>d1vzya2 g.81.1.1 (A:234-290) HSP33, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=24.39  E-value=10  Score=23.95  Aligned_cols=21  Identities=24%  Similarity=0.458  Sum_probs=16.1

Q ss_pred             CCCcccCCCCCC--CccHHHHhh
Q 026857           43 VRPDFPCPYCYE--DFDIASLCS   63 (232)
Q Consensus        43 ~~~~F~CPfC~e--~~d~~~L~~   63 (232)
                      ..-+..|.||+.  -|+..+|-.
T Consensus        29 g~iev~C~fC~~~Y~f~~~dl~~   51 (57)
T d1vzya2          29 GQAEAVCHFCNEKYLFTKEELEG   51 (57)
T ss_dssp             SEEEEECTTTCCEEEEEHHHHHH
T ss_pred             CCEEEEeeCCCCEEEECHHHHHH
Confidence            356899999999  777776643


No 83 
>d1e7la2 d.4.1.5 (A:1-103) Recombination endonuclease VII, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=24.17  E-value=7.3  Score=27.97  Aligned_cols=42  Identities=12%  Similarity=0.332  Sum_probs=22.7

Q ss_pred             CcccCCCCCCCccHH--H-HhhhhccccCC---CCCceecCCcccchh
Q 026857           45 PDFPCPYCYEDFDIA--S-LCSHLEDEHSC---ESKVTVCPICSVKVA   86 (232)
Q Consensus        45 ~~F~CPfC~e~~d~~--~-L~~H~~~eH~~---e~~~vvCPVCa~~v~   86 (232)
                      +...||.|+..++..  . -++|+-+.+..   .-+-+.|.-|-.-+|
T Consensus        19 Q~g~C~IC~~~~~~~~~~~~vDHdH~~~~~~TG~VRGlLC~~CN~~lG   66 (103)
T d1e7la2          19 QNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCDAAEG   66 (103)
T ss_dssp             TTTBCTTTCCBCCSSGGGSEEEECCCCSSTTTTBEEEEECHHHHHHHH
T ss_pred             hCCcCCCCCCCcccccccceeeccccccCCCCCceeeecchHHhHhhc
Confidence            467899999855322  2 23444332221   123466888865443


No 84 
>d2ctda1 g.37.1.1 (A:8-60) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.95  E-value=17  Score=22.95  Aligned_cols=22  Identities=32%  Similarity=0.620  Sum_probs=18.3

Q ss_pred             CcccCCCCCC--CccHHHHhhhhc
Q 026857           45 PDFPCPYCYE--DFDIASLCSHLE   66 (232)
Q Consensus        45 ~~F~CPfC~e--~~d~~~L~~H~~   66 (232)
                      -...||-|..  -=++.+|-.|++
T Consensus        26 G~v~CPtC~~V~RKTv~GLKKHMe   49 (53)
T d2ctda1          26 GSVSCPTCQAVGRKTIEGLKKHME   49 (53)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHH
T ss_pred             CcccCCccchhHHHHHHHHHHHHH
Confidence            3678999988  778999999975


No 85 
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.29  E-value=9.8  Score=23.27  Aligned_cols=21  Identities=29%  Similarity=0.736  Sum_probs=15.4

Q ss_pred             CcccCCC--CCCCcc-HHHHhhhh
Q 026857           45 PDFPCPY--CYEDFD-IASLCSHL   65 (232)
Q Consensus        45 ~~F~CPf--C~e~~d-~~~L~~H~   65 (232)
                      --|.|+|  |++-|. ...|..|+
T Consensus        17 kpy~C~~~~C~k~F~~~~~L~~H~   40 (47)
T d1ncsa_          17 KTFECLFPGCTKTFKRRYNIRSHI   40 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHH
T ss_pred             CCeECCcCCCCccccCchHHHhhc
Confidence            3799999  999554 45577775


No 86 
>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=22.64  E-value=11  Score=23.48  Aligned_cols=9  Identities=67%  Similarity=1.350  Sum_probs=6.6

Q ss_pred             ceecCCccc
Q 026857           75 VTVCPICSV   83 (232)
Q Consensus        75 ~vvCPVCa~   83 (232)
                      .-+||||-+
T Consensus         3 ~W~CPICm~   11 (47)
T d2j9ub1           3 TWVCPICMV   11 (47)
T ss_dssp             EEECTTTCC
T ss_pred             ceecceeee
Confidence            358999965


No 87 
>d1vq0a2 g.81.1.1 (A:231-287) HSP33, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=21.97  E-value=13  Score=23.41  Aligned_cols=20  Identities=20%  Similarity=0.507  Sum_probs=15.4

Q ss_pred             CCcccCCCCCC--CccHHHHhh
Q 026857           44 RPDFPCPYCYE--DFDIASLCS   63 (232)
Q Consensus        44 ~~~F~CPfC~e--~~d~~~L~~   63 (232)
                      ..+..|.||+.  .|+..+|-.
T Consensus        28 ~iev~C~FC~~~Y~f~~~el~~   49 (57)
T d1vq0a2          28 KGEVVCKWCNTRYVFSEEELEE   49 (57)
T ss_dssp             CEEEECTTTCCEEEECHHHHHH
T ss_pred             CeEEEeECCCCEEEECHHHHHH
Confidence            35899999999  777666643


No 88 
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Vibrio cholerae [TaxId: 666]}
Probab=21.01  E-value=5.5  Score=28.68  Aligned_cols=10  Identities=40%  Similarity=0.916  Sum_probs=8.3

Q ss_pred             CcccCCCCCC
Q 026857           45 PDFPCPYCYE   54 (232)
Q Consensus        45 ~~F~CPfC~e   54 (232)
                      ..|.||||..
T Consensus        26 ~d~~Cp~C~~   35 (181)
T d1beda_          26 FSFYCPHCNT   35 (181)
T ss_dssp             ECTTCHHHHH
T ss_pred             ECCCCccchh
Confidence            3699999976


No 89 
>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.95  E-value=14  Score=23.14  Aligned_cols=18  Identities=22%  Similarity=0.565  Sum_probs=11.3

Q ss_pred             cCCCCCCCc-cHHHHhhhh
Q 026857           48 PCPYCYEDF-DIASLCSHL   65 (232)
Q Consensus        48 ~CPfC~e~~-d~~~L~~H~   65 (232)
                      -|+||+.-+ --.++.+|+
T Consensus         8 eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           8 ECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             CCTTTTCCCCSSSCHHHHH
T ss_pred             cCcccceeeeeecchHhhh
Confidence            488998833 334556665


No 90 
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.86  E-value=23  Score=19.68  Aligned_cols=22  Identities=32%  Similarity=0.585  Sum_probs=16.1

Q ss_pred             CcccCCCCCCCc-cHHHHhhhhc
Q 026857           45 PDFPCPYCYEDF-DIASLCSHLE   66 (232)
Q Consensus        45 ~~F~CPfC~e~~-d~~~L~~H~~   66 (232)
                      +.|+|..|.+-| ..-+|.-|..
T Consensus         3 qvftcs~cqe~f~rrmelr~hmv   25 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMV   25 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHH
T ss_pred             ceEEeHHHHHHHHHHHhheeeee
Confidence            579999999944 4567777763


No 91 
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=20.81  E-value=10  Score=24.18  Aligned_cols=10  Identities=50%  Similarity=1.325  Sum_probs=7.5

Q ss_pred             eecCCcccch
Q 026857           76 TVCPICSVKV   85 (232)
Q Consensus        76 vvCPVCa~~v   85 (232)
                      .-||+|...+
T Consensus        41 ~~CP~CR~~i   50 (68)
T d1chca_          41 PTCPLCKVPV   50 (68)
T ss_dssp             CSTTTTCCCC
T ss_pred             CcCCCCCcch
Confidence            4699997754


Done!