BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026861
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49077|PYRB_ARATH Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis
thaliana GN=PYRB PE=2 SV=2
Length = 390
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/116 (85%), Positives = 109/116 (93%)
Query: 117 FEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQ 176
+DDIKDYLTS GVEWEES+DLMEVASKCDVVYQTRIQRERFGER DLYE ARGKYIVD+
Sbjct: 275 MKDDIKDYLTSSGVEWEESSDLMEVASKCDVVYQTRIQRERFGERLDLYEAARGKYIVDK 334
Query: 177 NVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 232
++L VM+K A+++HPLPRLDEIT DVDADPRAAYFRQAKNGL+IRMALLKLLLVGW
Sbjct: 335 DLLGVMQKKAIIMHPLPRLDEITADVDADPRAAYFRQAKNGLFIRMALLKLLLVGW 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 1 MASSSCSTCMMNKSSFAPRVINCKKELMFSYSSLVDKLPVHRNSFSLSADFSKSRLLLSH 60
+ASS S + S F P+ + C E + S + + SF S D K+ L
Sbjct: 3 IASSLTSATLCGASVF-PKALACSSEFPINLPSPFESSKICLTSFPASRDLKKNATL--- 58
Query: 61 EKSVKWKQTQQLPLRNSIQCWAVETQSTPSFTIGKKFQLDDVIEAQQFDRDILNAIFE 118
T+ + ++C A++ + KKF+L DVIE +QFDR++L+AIF+
Sbjct: 59 ------NLTRNV---GPVRCHAMQAGTREL----KKFELSDVIEGKQFDREMLSAIFD 103
>sp|Q43087|PYRB2_PEA Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum
GN=PYRB2 PE=2 SV=1
Length = 385
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 96/115 (83%), Positives = 111/115 (96%)
Query: 118 EDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQN 177
+DDIKDYLTS+GV+WEES+DL+EVAS+CDVVYQTRIQ+ERFGER DLYE+ARGK+IV+QN
Sbjct: 271 KDDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQN 330
Query: 178 VLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 232
+L M++HAV++HPLPRLDEITVDVDADPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 331 ILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 385
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 21/117 (17%)
Query: 2 ASSSCSTCMMNKSSFAPRVINCKKELMFSYSSLVDKLPVHRNSFSLSADFSKSRLLLSHE 61
ASSS +C M+ P++ K + +S K+ ++ S + SR +
Sbjct: 3 ASSSLFSCSMHMEVLTPKISKWPKNFVSCHS----KISYVETNYLKSTCYPISRFFCIN- 57
Query: 62 KSVKWKQTQQLPLRNSIQCWAVETQSTPSFTIGKKFQLDDVIEAQQFDRDILNAIFE 118
K+T+Q R+ I C F+ G+KFQLDDV+EAQQFDRDILNAIFE
Sbjct: 58 ---NLKKTRQ---RDGIHC----------FSEGQKFQLDDVVEAQQFDRDILNAIFE 98
>sp|Q43064|PYRB3_PEA Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum
GN=PYRB3 PE=2 SV=1
Length = 391
Score = 214 bits (544), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/116 (82%), Positives = 111/116 (95%)
Query: 117 FEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQ 176
+DDIKDYLTS+GV+WEES+DL+EVAS+CDVVYQTRIQ+ERFGER DLYE+ARGK+IV+Q
Sbjct: 276 MKDDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQ 335
Query: 177 NVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 232
N+L M++HAV++HPLPRLDEITVDVDADPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 336 NILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 391
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 2 ASSSCSTCMMNKSSFAPRVINCKKELMFSYSSLVDKLPVHRNSFSLSADFSKSRLLLSHE 61
ASSS +C M+ P++ K+ + +S K+ ++ S + SR L +
Sbjct: 3 ASSSLFSCSMHMEVLTPKISKWPKDFVSCHS----KISYVETNYLKSTCYPISRFLCINN 58
Query: 62 --KSVKWKQTQQLPLRNSIQCWAVETQSTPSFTIGKKFQLDDVIEAQQFDRDILNAIFE 118
K K +T+Q R+ I C F+ G+KFQLDDVIEAQQFDRDILNAIFE
Sbjct: 59 LSKCDKMIKTRQ---RDGIHC----------FSEGQKFQLDDVIEAQQFDRDILNAIFE 104
>sp|Q43086|PYRB1_PEA Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum
GN=PYRB1 PE=2 SV=1
Length = 386
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 110/116 (94%)
Query: 117 FEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQ 176
+DDIK+YLTS+GVEWEES+DLMEVASKCDVVYQTRIQ+ERFGE+ +LYEEARGKYIV+Q
Sbjct: 271 MKDDIKEYLTSKGVEWEESSDLMEVASKCDVVYQTRIQKERFGEKLNLYEEARGKYIVNQ 330
Query: 177 NVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 232
+VL+VM+ HAVV+HPLP+LDEI DVD DPRAAYFRQAKNGLYIRMALLK+LL+GW
Sbjct: 331 DVLKVMQNHAVVMHPLPKLDEIEADVDNDPRAAYFRQAKNGLYIRMALLKVLLLGW 386
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 80 CWAVETQSTPSFTIGKKFQLDDVIEAQQFDRDILNAIFE 118
A++ +S P F++G+KFQLDDVIEAQQFDR+ L+AIFE
Sbjct: 61 AGALQVESAPLFSVGQKFQLDDVIEAQQFDRETLSAIFE 99
>sp|A1RZC5|PYRB_THEPD Aspartate carbamoyltransferase OS=Thermofilum pendens (strain Hrk
5) GN=pyrB PE=3 SV=1
Length = 315
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
+D+K+ L +GV +EE EV + DV+Y TRIQRERF + ++ YE+ RG Y+VD +
Sbjct: 204 EDVKEALRERGVGFEEVESPSEVIGELDVLYVTRIQRERFPDPSE-YEKVRGSYVVDSKL 262
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231
L+ ++ +VLHPLPR+DEI+ DVD P A YF QA+ G+ +RMALLKL+L G
Sbjct: 263 LRNAKEGLIVLHPLPRVDEISFDVDGTPHAKYFEQARLGIPLRMALLKLVLKG 315
>sp|P08955|PYR1_MESAU CAD protein OS=Mesocricetus auratus GN=CAD PE=1 SV=4
Length = 2225
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 123 DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVM 182
D++ S+G + EE + E DV+Y TRIQ+ERFG T YE G++I+ +++
Sbjct: 2117 DFVASRGTKQEEFESIEEALPDTDVLYMTRIQKERFGS-TQEYEACFGQFILTPHIMTRA 2175
Query: 183 EKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K VV+HP+PR++EI+V+VD+DPRAAYFRQA+NG+YIRMALL +L
Sbjct: 2176 KKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVL 2222
>sp|P27708|PYR1_HUMAN CAD protein OS=Homo sapiens GN=CAD PE=1 SV=3
Length = 2225
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 121 IKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQ 180
++ ++ S+G + EE + E DV+Y TRIQ+ERFG T YE G++I+ +++
Sbjct: 2115 VRAFVASRGTKQEEFESIEEALPDTDVLYMTRIQKERFGS-TQEYEACFGQFILTPHIMT 2173
Query: 181 VMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K VV+HP+PR++EI+V+VD+DPRAAYFRQA+NG+YIRMALL +L
Sbjct: 2174 RAKKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVL 2222
>sp|Q91437|PYR1_SQUAC CAD protein OS=Squalus acanthias GN=CAD PE=2 SV=1
Length = 2242
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 120 DIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVL 179
+I +L S+G++ EE L E DV+Y TRIQ+ERF + YE G++I+ +++
Sbjct: 2131 NIIRFLASRGIKQEEFDSLEEALPDTDVLYMTRIQKERFASEEE-YEACFGQFILTPHIM 2189
Query: 180 QVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K VV+HPLPR++E++V+VD+DPRAAYFRQA+NG+Y+RMALL +L
Sbjct: 2190 TKGKKKMVVMHPLPRVNEVSVEVDSDPRAAYFRQAENGMYVRMALLATVL 2239
>sp|P05990|PYR1_DROME CAD protein OS=Drosophila melanogaster GN=r PE=1 SV=3
Length = 2224
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D++ ++ +GV+ + DL V DV+Y TRIQRERF D YE+ G ++
Sbjct: 2108 DEVVQFVHQRGVKQLFARDLKNVLPDTDVLYMTRIQRERFDNVED-YEKCCGHLVLTPEH 2166
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231
+ +K ++VLHPLPRL+EI+ ++D+DPRAAYFRQA+ G+YIRMALL +++ G
Sbjct: 2167 MMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFRQAEYGMYIRMALLAMVVGG 2219
>sp|A5N2L8|PYRB_CLOK5 Aspartate carbamoyltransferase OS=Clostridium kluyveri (strain ATCC
8527 / DSM 555 / NCIMB 10680) GN=pyrB PE=3 SV=1
Length = 306
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 121 IKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQ 180
+K L S+ V++EE+ +L + D++Y TR+QRERF D Y + YI+D+ +
Sbjct: 196 LKKELNSKNVKYEETKNLEDSIESLDILYMTRVQRERFFNEED-YIRLKDSYILDKGKIS 254
Query: 181 VMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
K +VLHPLPR++EI+ ++D DPRA YF+QAK G+Y+RMAL+ LL
Sbjct: 255 RAAKDMIVLHPLPRVNEISYEIDKDPRAYYFKQAKYGMYVRMALMIKLL 303
>sp|B9E695|PYRB_CLOK1 Aspartate carbamoyltransferase OS=Clostridium kluyveri (strain NBRC
12016) GN=pyrB PE=3 SV=1
Length = 306
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 121 IKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQ 180
+K L S+ V++EE+ +L + D++Y TR+QRERF D Y + YI+D+ +
Sbjct: 196 LKKELNSKNVKYEETKNLEDSIESLDILYMTRVQRERFFNEED-YIRLKDSYILDKGKIS 254
Query: 181 VMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
K +VLHPLPR++EI+ ++D DPRA YF+QAK G+Y+RMAL+ LL
Sbjct: 255 RAAKDMIVLHPLPRVNEISYEIDKDPRAYYFKQAKYGMYVRMALMIKLL 303
>sp|Q97FS3|PYRB_CLOAB Aspartate carbamoyltransferase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=pyrB PE=3 SV=1
Length = 307
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E+ + +V + DV+Y TR+Q+ERF D Y + YI+++N L+
Sbjct: 198 KEILDKNNIEYKEAKRIEDVIEELDVLYMTRVQKERFFNEED-YIRLKDSYILNENKLKT 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K ++LHPLPR++EI+ +VD D RA YF+QAKNG+Y+RMAL+ L+
Sbjct: 257 AKKDMIILHPLPRVNEISYEVDNDERAYYFKQAKNGMYVRMALMAKLM 304
>sp|Q09794|PYR1_SCHPO Protein ura1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ura1 PE=1 SV=1
Length = 2244
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
Query: 119 DDIKDYLTSQGVEWEESADLM-EVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQN 177
DD+KD + + G+ + E +L EV ++ DV+Y TR+Q+ERF D YE+ + +IVD +
Sbjct: 2126 DDVKDDIRANGLNFIEHRELTKEVVAQSDVLYCTRVQKERFAS-VDEYEKLKDSFIVDNS 2184
Query: 178 VLQVMEKHAVVLHPLPRLDEITVDVDADP-RAAYFRQAKNGLYIRMALLKLLL 229
VL + H +V+HPLPR EI+ +VD D RAAYFRQ + GLYIRMALL ++
Sbjct: 2185 VLASAKSHCIVMHPLPRNREISEEVDFDQRRAAYFRQMRYGLYIRMALLACVM 2237
>sp|P20054|PYR1_DICDI Protein PYR1-3 OS=Dictyostelium discoideum GN=pyr1-3 PE=1 SV=3
Length = 2225
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 125 LTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEK 184
L +G+E +E ++ + +V+Y TR+Q+ERF + + YE+ + +I+ + L
Sbjct: 2118 LNEKGIEQKEYTNIESILPTTNVLYVTRVQKERF-QSIEEYEKVKDSFIITPHTLTKASD 2176
Query: 185 HAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+ +V+HPLPR++EI+ +VD+DPRAAYFRQ +NGLY+RM+LL L+
Sbjct: 2177 NMIVMHPLPRINEISPEVDSDPRAAYFRQMENGLYVRMSLLALVF 2221
>sp|B0TPF3|PYRB3_SHEHH Aspartate carbamoyltransferase 3 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=pyrB3 PE=3 SV=1
Length = 310
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D I D L ++G ++ L V D++Y TR+Q+ERF E Y+ + +I++ N+
Sbjct: 195 DYIIDELKAKGCKYTLHDHLDGVLPNLDILYMTRVQKERFDETE--YQHLKSSFILNANM 252
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230
L+ ++++ VLHPLPR+DEIT DVD+ P A YF+QAKNG+Y R ALL L+L
Sbjct: 253 LEGVKENLKVLHPLPRIDEITTDVDSTPYAYYFQQAKNGVYARQALLALVLT 304
>sp|B0TST3|PYRB2_SHEHH Aspartate carbamoyltransferase 2 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=pyrB2 PE=3 SV=1
Length = 310
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 116 IFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVD 175
+ D I D L +G ++ L E+ D++Y TR+Q+ERF E Y+ + +I+
Sbjct: 192 LMPDYIIDELKEKGCKYTLHETLDEIMDSLDILYMTRVQKERFDETE--YQHLKSSFILT 249
Query: 176 QNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230
N+L+ ++ + +LHPLPR+DEIT DVD+ P A YF+QAKNG+Y R ALL L+L
Sbjct: 250 ANMLKGVKDNLKILHPLPRVDEITTDVDSTPYAYYFQQAKNGVYARQALLTLVLT 304
>sp|A2BJ24|PYRB_HYPBU Aspartate carbamoyltransferase OS=Hyperthermus butylicus (strain
DSM 5456 / JCM 9403) GN=pyrB PE=3 SV=1
Length = 315
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
Query: 120 DIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVL 179
+++ L +G+ + E L EV + DV+Y TRIQRERF ++ + YE+ RG Y V L
Sbjct: 202 EVRMVLDERGMRYREVESLEEVLGELDVLYVTRIQRERFPDQRE-YEKVRGSYRV---TL 257
Query: 180 QVMEKHAV----VLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLL 228
+++E+HA +LHPLPR+DEI +VD P AAYF QA+NG+ +RMALL L+
Sbjct: 258 ELLEQHARRELRILHPLPRVDEIAPEVDGTPYAAYFEQARNGVPVRMALLALI 310
>sp|B0S198|PYRB_FINM2 Aspartate carbamoyltransferase OS=Finegoldia magna (strain ATCC
29328) GN=pyrB PE=3 SV=1
Length = 306
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D IK +L S+ +E++E + +V + DV+Y TR+Q+ERF D Y + YI+D +
Sbjct: 194 DYIKMFLKSKNIEFKEVEKMEDVIGELDVLYMTRVQKERFFNEAD-YVRLKDSYILDNDK 252
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMAL-LKLLLV 230
+++ + VLHPLPR++EI +VD+DPRA YF+Q + G+ +RMAL LKLL V
Sbjct: 253 MKLATEDLAVLHPLPRVNEIATEVDSDPRAVYFKQVRYGVIVRMALILKLLGV 305
>sp|B7GRV4|PYRB_BIFLS Aspartate carbamoyltransferase OS=Bifidobacterium longum subsp.
infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 /
NCTC 11817 / S12) GN=pyrB PE=3 SV=1
Length = 320
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 132 WEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP 191
+ E DL V DV+Y TR+Q+ERF D Y R YI+D+ LQ+ + VLHP
Sbjct: 207 YVEVRDLASVIGDLDVLYMTRVQKERFFNEDD-YLRLRDTYILDEEKLQLAKPSMAVLHP 265
Query: 192 LPRLDEITVDVDADPRAAYFRQAKNGLYIRMAL 224
LPR++EI VDVD DPRAAYF Q KNG+ +RMAL
Sbjct: 266 LPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMAL 298
>sp|Q8G655|PYRB_BIFLO Aspartate carbamoyltransferase OS=Bifidobacterium longum (strain
NCC 2705) GN=pyrB PE=3 SV=2
Length = 320
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 132 WEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP 191
+ E DL V DV+Y TR+Q+ERF D Y R YI+D+ LQ+ + VLHP
Sbjct: 207 YVEVRDLASVIGDLDVLYMTRVQKERFFNEDD-YLRLRDTYILDEEKLQLAKPSMAVLHP 265
Query: 192 LPRLDEITVDVDADPRAAYFRQAKNGLYIRMAL 224
LPR++EI VDVD DPRAAYF Q KNG+ +RMAL
Sbjct: 266 LPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMAL 298
>sp|B3DS61|PYRB_BIFLD Aspartate carbamoyltransferase OS=Bifidobacterium longum (strain
DJO10A) GN=pyrB PE=3 SV=1
Length = 320
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 132 WEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP 191
+ E DL V DV+Y TR+Q+ERF D Y R YI+D+ LQ+ + VLHP
Sbjct: 207 YVEVRDLASVIGDLDVLYMTRVQKERFFNEDD-YLRLRDTYILDEEKLQLAKPSMAVLHP 265
Query: 192 LPRLDEITVDVDADPRAAYFRQAKNGLYIRMAL 224
LPR++EI VDVD DPRAAYF Q KNG+ +RMAL
Sbjct: 266 LPRVNEIAVDVDDDPRAAYFEQVKNGMLVRMAL 298
>sp|C3KU87|PYRB_CLOB6 Aspartate carbamoyltransferase OS=Clostridium botulinum (strain 657
/ Type Ba4) GN=pyrB PE=3 SV=1
Length = 307
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEVSKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMKY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|B1L1E7|PYRB_CLOBM Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=pyrB PE=3 SV=1
Length = 307
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEVSKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMKY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|A7GII2|PYRB_CLOBL Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=pyrB PE=3 SV=1
Length = 307
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEVSKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMKY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|Q18CS8|PYRB_CLOD6 Aspartate carbamoyltransferase OS=Clostridium difficile (strain
630) GN=pyrB PE=3 SV=1
Length = 306
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 121 IKDYLTS--QGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
+ DY+ +G + E+ +L +V DV+Y TR+Q+ERF ++++ YE + YI+++
Sbjct: 192 MPDYIKEAIKGHAYYETNNLDDVIGSLDVLYMTRVQQERFEDKSE-YERLKNYYILNKAK 250
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
L+ K +V+HPLPR++EI +DVD+D RA YF+QAK G+Y+RMAL+ LL
Sbjct: 251 LEKASKDMLVMHPLPRVNEIDIDVDSDDRAVYFKQAKYGMYVRMALIIKLL 301
>sp|C1FLB6|PYRB_CLOBJ Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=pyrB PE=3 SV=1
Length = 307
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEISKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMKY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|A5I6X1|PYRB_CLOBH Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pyrB PE=3
SV=1
Length = 307
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEISKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMKY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|A7FYJ2|PYRB_CLOB1 Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEISKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMKY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|B1INE7|PYRB_CLOBK Aspartate carbamoyltransferase OS=Clostridium botulinum (strain
Okra / Type B1) GN=pyrB PE=3 SV=1
Length = 307
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
K+ L +E++E + + + ++ D++Y TR+QRERF D Y + YI+D ++
Sbjct: 198 KEILEKNNIEYKEVSKMEDAMAELDILYMTRVQRERFFNEDD-YVRLKDSYILDGEKMRY 256
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+K +VLHPLPR++EI ++D DPR YF+QAK G+Y+RMAL+ LL
Sbjct: 257 AKKDMMVLHPLPRVNEIAYEIDQDPRGCYFKQAKYGMYVRMALIAKLL 304
>sp|B0TSQ4|PYRB1_SHEHH Aspartate carbamoyltransferase 1 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=pyrB1 PE=3 SV=1
Length = 310
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 121 IKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQ 180
I D L +G + + L V SK D++Y TR+Q+ERF E Y+ + +I+ + +
Sbjct: 197 IIDELKEKGCTFTQYDSLDGVLSKLDILYMTRVQKERFDETE--YQHMKSSFILTAQMFE 254
Query: 181 VMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230
++ + VLHPLPR+DEIT DVD+ P A YF+QAKNG+Y R ALL L+L
Sbjct: 255 GVKDNLKVLHPLPRVDEITTDVDSTPYAYYFQQAKNGVYARQALLALVLT 304
>sp|A0Q2N5|PYRB_CLONN Aspartate carbamoyltransferase OS=Clostridium novyi (strain NT)
GN=pyrB PE=3 SV=1
Length = 306
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D IK++L + +E++E L +V + D++Y TR+Q+ERF ++ + Y + Y++D+
Sbjct: 194 DYIKEFLNERNIEFKEVDKLEDVIGELDILYMTRVQKERFEDKEE-YIRLKDTYVLDKEK 252
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+ V ++ +VLHPLPR++EI+ +VD D RA YF+QA+ G+++RMAL+ +L
Sbjct: 253 MNVAKEDMMVLHPLPRVNEISTNVDDDKRACYFKQARFGMFVRMALIAKVL 303
>sp|B1L385|PYRB_KORCO Aspartate carbamoyltransferase OS=Korarchaeum cryptofilum (strain
OPF8) GN=pyrB PE=3 SV=1
Length = 296
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Query: 122 KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181
++ L S + WE S DL + + DV+Y TR+Q+ERF + ++ YE +G Y VD ++L+
Sbjct: 190 QELLDSLKMPWEFS-DLKDALPELDVLYVTRVQKERFPDPSE-YERVKGSYKVDSSILKD 247
Query: 182 MEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALL 225
++ ++LHPLPR+DEI++DVD+ P A YF+QA NG+ +RMALL
Sbjct: 248 AKEGLMILHPLPRVDEISLDVDSTPYAYYFKQAANGVPVRMALL 291
>sp|A8MIU1|PYRB_ALKOO Aspartate carbamoyltransferase OS=Alkaliphilus oremlandii (strain
OhILAs) GN=pyrB PE=3 SV=1
Length = 331
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Query: 116 IFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVD 175
I ED + + V+ E+ L + ++ D++Y TRIQ+ERF + D YE+ + YI+
Sbjct: 193 IPEDLKTEVIEKYNVKITETDSLEKHMAEIDILYMTRIQKERFLNQED-YEKLKDSYILT 251
Query: 176 QNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
++L+ ++ ++LHPLPR++EI +VD DPRA YF QAK G+Y+RMAL+ LLL
Sbjct: 252 NSLLENAKQDLIILHPLPRVNEIHTEVDRDPRAKYFEQAKMGVYVRMALMALLL 305
>sp|Q97B29|PYRB_THEVO Aspartate carbamoyltransferase OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=pyrB PE=3 SV=1
Length = 305
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 133 EESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192
+E DL EV + DV+Y TRIQ+ERF ++ + Y+ G Y ++ ++ M+K +V++HPL
Sbjct: 208 KEYNDLEEVIGETDVLYVTRIQKERFSDQNE-YQSVIGSYSINSETVEKMKKKSVIMHPL 266
Query: 193 PRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
PR+DEI+ DVD P+AAYFRQA G+ +RMAL+ +L
Sbjct: 267 PRVDEISPDVDNMPQAAYFRQAYYGVPVRMALIYKIL 303
>sp|Q7P145|PYRB_CHRVO Aspartate carbamoyltransferase OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=pyrB PE=3 SV=1
Length = 302
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D I + L +G+ + + L V + DV+Y TR+QRERF E + + +G+Y + ++
Sbjct: 190 DYICEELDEKGISYTVADSLEAVIPEVDVLYMTRVQRERFDEAE--FRKIQGQYALRADM 247
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
L+ VLHPLPR+DEI VDVDA P A YF QAKNG+Y R ALL L+L
Sbjct: 248 LKHARPGMKVLHPLPRVDEIAVDVDATPHAYYFEQAKNGVYARQALLSLVL 298
>sp|Q0STN4|PYRB_CLOPS Aspartate carbamoyltransferase OS=Clostridium perfringens (strain
SM101 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Query: 112 ILNAIFEDDIKDYLTSQ-----GVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYE 166
IL + E I +Y+ Q +E++E L E + D++Y TRIQRERF ++++ YE
Sbjct: 183 ILISPIELRIPNYIREQILEKNNIEYKEITSLEEGIKEADILYMTRIQRERFVDQSE-YE 241
Query: 167 EARGKYIVDQNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLK 226
+ Y++D+ ++ ++ +VLHPLPR++EI +VD D RA YF+QAK G+Y+RMAL+
Sbjct: 242 RLKDVYVLDEAKMKGAKEDMMVLHPLPRVNEIAYEVDEDSRAFYFKQAKCGMYVRMALMA 301
Query: 227 LLL 229
LL
Sbjct: 302 KLL 304
>sp|Q0TRA8|PYRB_CLOP1 Aspartate carbamoyltransferase OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Query: 112 ILNAIFEDDIKDYLTSQ-----GVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYE 166
IL + E I +Y+ Q +E++E L E + D++Y TRIQRERF ++++ YE
Sbjct: 183 ILISPIELRIPNYIREQILEKNNIEYKEITSLEEGIKEADILYMTRIQRERFVDQSE-YE 241
Query: 167 EARGKYIVDQNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLK 226
+ Y++D+ ++ ++ +VLHPLPR++EI +VD D RA YF+QAK G+Y+RMAL+
Sbjct: 242 RLKDVYVLDEAKMKGAKEDMMVLHPLPRVNEIAYEVDEDSRAFYFKQAKCGMYVRMALMA 301
Query: 227 LLL 229
LL
Sbjct: 302 KLL 304
>sp|Q8ZYH7|PYRB_PYRAE Aspartate carbamoyltransferase OS=Pyrobaculum aerophilum (strain
ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=pyrB PE=3 SV=1
Length = 305
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 123 DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVM 182
DY+ S+G+++ L EV + DVVY RIQ+ERF + + YE+ +G Y + +VL+
Sbjct: 197 DYIQSRGMKYSFHNGLEEVIHELDVVYVVRIQKERFLDPLE-YEKVKGSYKITLDVLKNA 255
Query: 183 EKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231
+ + ++LHPLPR+DEI VDA P A YF+QA G+ +RMAL+ L+L G
Sbjct: 256 KTNLIILHPLPRVDEIDHKVDATPYAKYFKQAALGVPLRMALIYLILAG 304
>sp|A1A1F7|PYRB_BIFAA Aspartate carbamoyltransferase OS=Bifidobacterium adolescentis
(strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)
GN=pyrB PE=3 SV=2
Length = 320
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 127 SQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHA 186
++ + E DL+ V DV+Y TR+Q+ERF D Y R YI+D+ + +K
Sbjct: 202 TESCSYTEVKDLVSVIGDLDVLYMTRVQKERFFNEDD-YLRLRDTYILDEAKMAYAKKDM 260
Query: 187 VVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMAL 224
VLHPLPR++EI V+VD DPRAAYF Q KNG+ +RMAL
Sbjct: 261 AVLHPLPRVNEIAVEVDDDPRAAYFEQVKNGMLMRMAL 298
>sp|A7MSE0|PYRB_VIBHB Aspartate carbamoyltransferase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=pyrB PE=3 SV=2
Length = 309
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Query: 121 IKDYLTSQ----GVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQ 176
+ DYL + G+++ D+ V + D++Y TR+Q+ERF E Y + YI+
Sbjct: 195 MPDYLCEELDEAGIQYSLHTDMESVIPELDILYMTRVQKERFDESE--YAHIKSAYILTA 252
Query: 177 NVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+L+ ++ VLHPLPR+DEIT DVD P A YF+QA+NG+Y R ALL L+L
Sbjct: 253 ALLEGARENLKVLHPLPRVDEITTDVDVTPHAYYFQQAENGVYARQALLALVL 305
>sp|Q8XL59|PYRB_CLOPE Aspartate carbamoyltransferase OS=Clostridium perfringens (strain
13 / Type A) GN=pyrB PE=3 SV=1
Length = 307
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 81/123 (65%), Gaps = 6/123 (4%)
Query: 112 ILNAIFEDDIKDYLTSQ-----GVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYE 166
IL + E I +Y+ Q +E++E L E + +++Y TRIQRERF ++++ YE
Sbjct: 183 ILISPIELRIPNYIREQILEKNNIEYKEITSLEEGIKEANILYMTRIQRERFVDQSE-YE 241
Query: 167 EARGKYIVDQNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLK 226
+ Y++D+ ++ ++ +VLHPLPR++EI+ +VD D RA YF+QAK G+Y+RMAL+
Sbjct: 242 RLKDVYVLDEAKMKGAKEDMMVLHPLPRVNEISYEVDEDSRAFYFKQAKCGMYVRMALMA 301
Query: 227 LLL 229
LL
Sbjct: 302 KLL 304
>sp|A1KRE1|PYRB_NEIMF Aspartate carbamoyltransferase OS=Neisseria meningitidis serogroup
C / serotype 2a (strain ATCC 700532 / FAM18) GN=pyrB
PE=3 SV=1
Length = 306
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
Query: 121 IKDYLTSQ----GVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQ 176
+ DY+T + G + L E A D++Y TR+QRERF E+ + + +GK+ +D
Sbjct: 192 MPDYITEELDEAGCRYRILGSLEEAAEWADILYMTRVQRERFDEQE--FAKIQGKFNLDA 249
Query: 177 NVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
++L + + VLHPLPR+DEI DVDA P A YF QA NG+Y RMA+L L+L
Sbjct: 250 SMLARAKPNLRVLHPLPRVDEIHPDVDATPHAYYFEQATNGVYARMAILSLVL 302
>sp|B1Y9R0|PYRB_PYRNV Aspartate carbamoyltransferase OS=Pyrobaculum neutrophilum (strain
DSM 2338 / JCM 9278 / V24Sta) GN=pyrB PE=3 SV=1
Length = 304
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Query: 123 DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVM 182
DY+ S+G++ ++ EV + DV+Y RIQ+ERF + + YE+ +G Y + ++L+
Sbjct: 197 DYVQSRGLKLSFHTNVEEVIHELDVLYVVRIQKERFIDPLE-YEKVKGSYRITVDMLKNA 255
Query: 183 EKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+H ++LHPLPR+DEI VDA P A YFRQA G+ +RMALL L+L
Sbjct: 256 RRHLIILHPLPRVDEIDHRVDATPHARYFRQAALGVPLRMALLYLIL 302
>sp|Q8TVB2|PYRB_METKA Aspartate carbamoyltransferase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pyrB PE=3
SV=1
Length = 309
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 8/116 (6%)
Query: 121 IKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQ 180
I + L G E EE DL E+ DV+Y TRIQRE F + + +E +G Y V + +
Sbjct: 198 ILEELEQIGAEVEEHRDLEEILPDLDVLYVTRIQREMFPDPEE-FERVKGSYKVTR---E 253
Query: 181 VMEKHA----VVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 232
++E+HA V+LHPLPR+DEI DVD P+A YF Q +NG+ +RMALL L+L G
Sbjct: 254 LIEEHARSDLVILHPLPRVDEIEPDVDELPQARYFDQVRNGVIVRMALLDLILGGG 309
>sp|O27464|PYRB_METTH Aspartate carbamoyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pyrB PE=3 SV=1
Length = 312
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D+I L GVE +E+ L +V + DV+Y TRIQ+ERF + + Y RG Y +D +
Sbjct: 193 DNIIHDLRRAGVEVKETERLDDVIDEVDVLYVTRIQKERFPDPEE-YSRIRGAYHIDGST 251
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
V ++ +V+HPLPR+DEI+ +VD+ P+A YFRQA G+ +RMALL+LL+
Sbjct: 252 --VADRDLIVMHPLPRIDEISPEVDSLPQAMYFRQAFYGVPVRMALLRLLI 300
>sp|Q87LF8|PYRB_VIBPA Aspartate carbamoyltransferase OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=pyrB PE=3 SV=1
Length = 309
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 125 LTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEK 184
L G+E+ ++ V + D++Y TR+Q+ERF E Y + YI+ +L+ +
Sbjct: 203 LDEAGIEYSLHTEMEAVIPELDILYMTRVQKERFDESE--YAHIKSAYILTAALLKGARE 260
Query: 185 HAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
+ VLHPLPR+DEIT DVD P A YF+QA+NG+Y R ALL L+L
Sbjct: 261 NLKVLHPLPRVDEITTDVDKTPHAYYFQQAQNGVYARQALLALVL 305
>sp|Q6LUX0|PYRB_PHOPR Aspartate carbamoyltransferase OS=Photobacterium profundum GN=pyrB
PE=3 SV=1
Length = 309
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D I + L G+ + A + EV + DV+Y TR+Q+ERF E Y + YI+ ++
Sbjct: 197 DYICEELDEAGINYSLHASMEEVIPELDVLYMTRVQKERFDESE--YAHMKAAYILTADM 254
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
L + +LHPLPR+DEITVDVD A YF+QA+NG+Y R ALL L+L
Sbjct: 255 LAEARDNMKILHPLPRIDEITVDVDKTKHAYYFQQAENGVYAREALLALVL 305
>sp|Q7MHF1|PYRB_VIBVY Aspartate carbamoyltransferase OS=Vibrio vulnificus (strain YJ016)
GN=pyrB PE=3 SV=1
Length = 309
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D I + L G+ + D+ V + D++Y TR+Q+ERF E Y + YI+ +
Sbjct: 197 DYILEDLDEAGISYSLHTDMETVIPELDILYMTRVQKERFDESE--YAHIKSAYILTAAL 254
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
L+ ++ VLHPLPR+DEIT DVD P A YF+QA NG+Y R ALL L+L
Sbjct: 255 LEGARENLKVLHPLPRVDEITTDVDKTPHAYYFQQAGNGVYAREALLALVL 305
>sp|Q8DCF6|PYRB_VIBVU Aspartate carbamoyltransferase OS=Vibrio vulnificus (strain CMCP6)
GN=pyrB PE=3 SV=1
Length = 309
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 119 DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178
D I + L G+ + D+ V + D++Y TR+Q+ERF E Y + YI+ +
Sbjct: 197 DYILEDLDEAGISYSLHTDMETVIPELDILYMTRVQKERFDESE--YAHIKSAYILTAAL 254
Query: 179 LQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
L+ ++ VLHPLPR+DEIT DVD P A YF+QA NG+Y R ALL L+L
Sbjct: 255 LEGARENLKVLHPLPRVDEITTDVDKTPHAYYFQQAGNGVYAREALLALVL 305
>sp|A0RXJ5|PYRB_CENSY Aspartate carbamoyltransferase OS=Cenarchaeum symbiosum (strain A)
GN=pyrB PE=3 SV=1
Length = 309
Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 116 IFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVD 175
I D I D T +++ ES L E + DVVY TRIQ+ERF + + Y + +G Y++
Sbjct: 194 IRTDSIYDIRTK--LDFAESESLDEYVDELDVVYVTRIQKERFPDEEE-YLKVKGSYVIG 250
Query: 176 QNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229
++L+ M+ A++LHPLPRLDEI+ +VD +A YF QA+ G+Y R ALL L+L
Sbjct: 251 LDMLRKMKDGAIILHPLPRLDEISGEVDGTDKAKYFVQAEYGVYTRAALLGLVL 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,618,021
Number of Sequences: 539616
Number of extensions: 3037898
Number of successful extensions: 9806
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 409
Number of HSP's that attempted gapping in prelim test: 8990
Number of HSP's gapped (non-prelim): 785
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)