Query 026861
Match_columns 232
No_of_seqs 134 out of 1265
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 00:00:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pg5_A Aspartate carbamoyltran 100.0 3.8E-38 1.3E-42 286.0 12.2 128 102-231 168-299 (299)
2 1ml4_A Aspartate transcarbamoy 100.0 3.6E-38 1.2E-42 287.1 11.6 128 102-231 174-307 (308)
3 3csu_A Protein (aspartate carb 100.0 7.6E-38 2.6E-42 285.3 9.2 127 102-231 173-306 (310)
4 1pvv_A Otcase, ornithine carba 100.0 4.4E-37 1.5E-41 280.7 12.8 130 102-232 172-313 (315)
5 4ekn_B Aspartate carbamoyltran 100.0 6.6E-37 2.3E-41 278.6 11.7 125 102-230 170-301 (306)
6 3gd5_A Otcase, ornithine carba 100.0 6.7E-37 2.3E-41 280.5 8.6 129 102-231 174-314 (323)
7 4ep1_A Otcase, ornithine carba 100.0 9.8E-37 3.3E-41 281.2 9.7 128 102-231 196-335 (340)
8 3tpf_A Otcase, ornithine carba 100.0 5.7E-36 2E-40 272.6 8.8 129 102-231 163-303 (307)
9 2i6u_A Otcase, ornithine carba 100.0 2.9E-35 1E-39 267.9 11.1 144 87-231 148-306 (307)
10 1vlv_A Otcase, ornithine carba 100.0 5.1E-35 1.8E-39 268.2 11.3 127 102-229 185-324 (325)
11 1duv_G Octase-1, ornithine tra 100.0 2E-34 6.8E-39 265.1 13.0 146 85-231 153-333 (333)
12 4f2g_A Otcase 1, ornithine car 100.0 1.7E-35 5.8E-40 269.7 5.4 129 102-231 171-305 (309)
13 1dxh_A Ornithine carbamoyltran 100.0 2.6E-34 9E-39 264.4 12.6 146 85-231 153-334 (335)
14 3grf_A Ornithine carbamoyltran 100.0 1.8E-34 6.2E-39 264.8 11.3 146 85-231 159-324 (328)
15 4h31_A Otcase, ornithine carba 100.0 1E-33 3.4E-38 262.2 12.8 145 85-230 179-357 (358)
16 2ef0_A Ornithine carbamoyltran 100.0 7.2E-34 2.5E-38 258.2 9.8 126 102-230 171-301 (301)
17 1zq6_A Otcase, ornithine carba 100.0 3.3E-33 1.1E-37 259.2 12.9 131 99-231 209-356 (359)
18 4amu_A Ornithine carbamoyltran 100.0 2.4E-33 8.1E-38 260.7 11.8 142 88-230 181-364 (365)
19 2w37_A Ornithine carbamoyltran 100.0 2.2E-33 7.7E-38 260.4 11.5 144 86-231 175-353 (359)
20 3kzn_A Aotcase, N-acetylornith 100.0 5.1E-33 1.7E-37 257.1 13.1 128 102-231 213-356 (359)
21 3r7f_A Aspartate carbamoyltran 100.0 7.5E-34 2.6E-38 258.4 7.3 123 102-230 166-290 (304)
22 4a8t_A Putrescine carbamoyltra 100.0 1E-32 3.5E-37 254.3 12.0 130 100-231 189-333 (339)
23 1oth_A Protein (ornithine tran 100.0 1.1E-32 3.8E-37 252.3 10.8 129 102-231 172-311 (321)
24 4a8p_A Putrescine carbamoyltra 100.0 1.6E-32 5.6E-37 254.2 11.1 130 100-231 167-311 (355)
25 3d6n_B Aspartate carbamoyltran 100.0 3.3E-33 1.1E-37 252.9 6.1 123 102-230 165-291 (291)
26 3sds_A Ornithine carbamoyltran 100.0 5.3E-32 1.8E-36 250.6 12.0 144 86-230 187-347 (353)
27 1js1_X Transcarbamylase; alpha 100.0 5.5E-32 1.9E-36 248.1 8.7 143 83-231 169-316 (324)
28 3q98_A Transcarbamylase; rossm 100.0 7.9E-32 2.7E-36 252.9 7.2 130 99-229 211-379 (399)
29 2yfk_A Aspartate/ornithine car 100.0 1.9E-30 6.4E-35 244.8 7.5 136 93-229 201-376 (418)
30 3h9u_A Adenosylhomocysteinase; 94.5 0.12 4.2E-06 48.9 8.6 101 85-201 170-307 (436)
31 1v8b_A Adenosylhomocysteinase; 86.1 1.5 5E-05 41.9 7.0 94 85-198 255-350 (479)
32 3d64_A Adenosylhomocysteinase; 85.3 2.5 8.5E-05 40.4 8.1 75 103-197 294-369 (494)
33 3tqr_A Phosphoribosylglycinami 74.3 5.8 0.0002 33.7 6.1 88 88-192 8-114 (215)
34 3n0v_A Formyltetrahydrofolate 70.4 11 0.00037 33.3 7.1 88 88-193 93-200 (286)
35 3r7f_A Aspartate carbamoyltran 68.8 2.2 7.4E-05 38.5 2.2 49 86-135 113-179 (304)
36 3o1l_A Formyltetrahydrofolate 68.5 7.3 0.00025 34.8 5.6 88 88-193 108-215 (302)
37 3lou_A Formyltetrahydrofolate 66.0 10 0.00035 33.7 6.0 88 88-193 98-205 (292)
38 3p2y_A Alanine dehydrogenase/p 65.8 12 0.0004 34.6 6.5 96 84-191 181-301 (381)
39 4dio_A NAD(P) transhydrogenase 65.3 11 0.00038 35.1 6.3 45 137-192 268-312 (405)
40 4ds3_A Phosphoribosylglycinami 64.9 20 0.00067 30.3 7.3 88 88-192 10-117 (209)
41 3kcq_A Phosphoribosylglycinami 63.5 14 0.0005 31.2 6.2 88 88-192 11-113 (215)
42 3gg9_A D-3-phosphoglycerate de 62.9 20 0.00069 32.3 7.4 47 103-152 177-223 (352)
43 3n58_A Adenosylhomocysteinase; 61.5 28 0.00096 33.2 8.4 51 137-203 295-345 (464)
44 3grf_A Ornithine carbamoyltran 60.8 2.8 9.7E-05 38.0 1.4 34 87-121 122-170 (328)
45 2b0j_A 5,10-methenyltetrahydro 57.5 25 0.00087 32.2 7.0 63 88-152 70-149 (358)
46 3ond_A Adenosylhomocysteinase; 56.7 48 0.0017 31.6 9.2 97 87-199 226-359 (488)
47 3fef_A Putative glucosidase LP 53.6 14 0.00047 34.8 4.8 24 129-152 60-83 (450)
48 3obi_A Formyltetrahydrofolate 53.3 9.8 0.00034 33.6 3.5 88 88-193 92-200 (288)
49 3p9x_A Phosphoribosylglycinami 51.5 42 0.0014 28.3 7.1 88 88-193 5-113 (211)
50 3u95_A Glycoside hydrolase, fa 51.2 12 0.00041 35.3 3.9 24 128-151 60-83 (477)
51 3q0i_A Methionyl-tRNA formyltr 51.0 44 0.0015 29.7 7.5 56 120-192 54-116 (318)
52 3gvp_A Adenosylhomocysteinase 50.4 1.1E+02 0.0036 28.8 10.3 51 136-202 267-317 (435)
53 3oj0_A Glutr, glutamyl-tRNA re 48.5 19 0.00067 27.0 4.2 59 93-152 27-88 (144)
54 3jtm_A Formate dehydrogenase, 48.2 33 0.0011 30.9 6.3 48 103-153 181-229 (351)
55 3nrb_A Formyltetrahydrofolate 48.2 8.5 0.00029 34.0 2.3 88 88-193 91-199 (287)
56 4hy3_A Phosphoglycerate oxidor 48.1 31 0.0011 31.4 6.1 45 104-152 194-238 (365)
57 1jkx_A GART;, phosphoribosylgl 46.7 71 0.0024 26.6 7.7 89 88-193 3-111 (212)
58 1vlv_A Otcase, ornithine carba 46.0 12 0.0004 34.0 2.9 33 87-121 135-176 (325)
59 2g76_A 3-PGDH, D-3-phosphoglyc 44.0 53 0.0018 29.3 6.9 25 125-152 203-227 (335)
60 1x7d_A Ornithine cyclodeaminas 41.7 51 0.0017 29.5 6.4 65 89-153 131-203 (350)
61 2rir_A Dipicolinate synthase, 41.5 74 0.0025 27.1 7.2 85 90-192 160-246 (300)
62 1meo_A Phosophoribosylglycinam 39.6 92 0.0032 25.9 7.4 88 88-192 3-110 (209)
63 3d4o_A Dipicolinate synthase s 39.0 90 0.0031 26.5 7.4 70 105-192 174-244 (293)
64 1wwk_A Phosphoglycerate dehydr 38.7 52 0.0018 28.7 5.9 44 105-152 161-204 (307)
65 1zq6_A Otcase, ornithine carba 38.5 16 0.00054 33.6 2.5 34 86-121 156-201 (359)
66 3hdj_A Probable ornithine cycl 36.7 26 0.0009 30.9 3.7 63 90-153 124-192 (313)
67 4g2n_A D-isomer specific 2-hyd 35.1 49 0.0017 29.7 5.2 47 134-192 217-263 (345)
68 2bln_A Protein YFBG; transfera 35.0 28 0.00097 30.7 3.6 55 121-192 45-106 (305)
69 1mx3_A CTBP1, C-terminal bindi 34.8 34 0.0012 30.6 4.2 24 127-152 208-231 (347)
70 3ce6_A Adenosylhomocysteinase; 32.0 1.3E+02 0.0046 28.3 7.9 47 102-152 290-337 (494)
71 3pid_A UDP-glucose 6-dehydroge 31.7 40 0.0014 31.4 4.2 21 135-155 386-406 (432)
72 2ekl_A D-3-phosphoglycerate de 31.7 76 0.0026 27.7 5.8 25 125-152 180-204 (313)
73 1gdh_A D-glycerate dehydrogena 31.5 66 0.0023 28.2 5.4 46 104-152 164-210 (320)
74 1pzg_A LDH, lactate dehydrogen 31.3 61 0.0021 28.5 5.1 24 129-152 63-86 (331)
75 4h31_A Otcase, ornithine carba 30.6 22 0.00074 32.4 2.1 49 86-135 146-212 (358)
76 1z7e_A Protein aRNA; rossmann 30.4 49 0.0017 31.4 4.6 55 121-192 45-106 (660)
77 1ygy_A PGDH, D-3-phosphoglycer 30.0 76 0.0026 29.9 5.8 25 125-152 180-204 (529)
78 3da8_A Probable 5'-phosphoribo 29.7 1.4E+02 0.0046 25.1 6.8 87 88-192 15-120 (215)
79 4a8t_A Putrescine carbamoyltra 29.3 32 0.0011 31.3 2.9 33 86-121 139-184 (339)
80 2dbq_A Glyoxylate reductase; D 28.9 97 0.0033 27.2 6.1 43 106-152 170-212 (334)
81 2bw0_A 10-FTHFDH, 10-formyltet 28.8 1.2E+02 0.004 27.0 6.6 58 119-193 62-131 (329)
82 4e5n_A Thermostable phosphite 28.6 51 0.0018 29.2 4.2 45 104-152 163-208 (330)
83 4a8p_A Putrescine carbamoyltra 28.1 34 0.0012 31.3 2.9 35 86-121 117-162 (355)
84 1omo_A Alanine dehydrogenase; 27.7 1.1E+02 0.0038 26.6 6.2 64 88-153 126-196 (322)
85 2nac_A NAD-dependent formate d 26.9 97 0.0033 28.4 5.8 25 126-152 231-255 (393)
86 3sds_A Ornithine carbamoyltran 26.5 39 0.0013 30.8 3.1 34 86-121 142-197 (353)
87 4amu_A Ornithine carbamoyltran 25.5 27 0.00094 32.1 1.8 33 87-121 148-189 (365)
88 1l7d_A Nicotinamide nucleotide 24.2 1.4E+02 0.0047 26.6 6.2 76 102-189 188-291 (384)
89 1x13_A NAD(P) transhydrogenase 23.6 1.5E+02 0.0053 26.7 6.5 95 85-192 170-292 (401)
90 1up7_A 6-phospho-beta-glucosid 23.2 50 0.0017 30.4 3.1 23 130-152 59-81 (417)
91 3pid_A UDP-glucose 6-dehydroge 23.1 92 0.0031 28.9 4.9 23 130-152 95-117 (432)
92 2i99_A MU-crystallin homolog; 23.0 71 0.0024 27.6 3.9 61 93-153 141-205 (312)
93 3l07_A Bifunctional protein fo 22.8 94 0.0032 27.5 4.7 83 70-152 98-212 (285)
94 1s6y_A 6-phospho-beta-glucosid 22.4 69 0.0024 29.8 3.9 24 129-152 68-91 (450)
95 2j6i_A Formate dehydrogenase; 22.4 1.2E+02 0.004 27.2 5.4 27 124-152 203-229 (364)
96 1fy2_A Aspartyl dipeptidase; s 22.0 1.1E+02 0.0039 25.3 4.9 30 123-152 55-87 (229)
97 2d0i_A Dehydrogenase; structur 21.7 1.2E+02 0.0039 26.8 5.1 44 105-152 165-208 (333)
98 3av3_A Phosphoribosylglycinami 21.6 3E+02 0.01 22.6 7.4 88 88-192 6-113 (212)
99 2o4c_A Erythronate-4-phosphate 21.4 84 0.0029 28.7 4.2 48 136-192 159-207 (380)
100 2w2k_A D-mandelate dehydrogena 20.8 1.4E+02 0.0048 26.4 5.5 43 107-152 185-228 (348)
101 3dcm_X AdoMet, uncharacterized 20.8 56 0.0019 27.4 2.7 55 98-152 30-112 (192)
102 3p2o_A Bifunctional protein fo 20.7 1.1E+02 0.0039 27.0 4.8 83 70-152 97-211 (285)
103 1oju_A MDH, malate dehydrogena 20.7 1.2E+02 0.004 26.5 4.9 23 129-152 55-77 (294)
104 1u8x_X Maltose-6'-phosphate gl 20.3 73 0.0025 29.9 3.7 25 128-152 86-110 (472)
No 1
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=100.00 E-value=3.8e-38 Score=285.98 Aligned_cols=128 Identities=34% Similarity=0.554 Sum_probs=116.2
Q ss_pred HHHHhcC-CcccccccchHhH---HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHH
Q 026861 102 VIEAQQF-DRDILNAIFEDDI---KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQN 177 (232)
Q Consensus 102 li~A~~~-~~~~l~v~~p~di---~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~e 177 (232)
+..+..| |++ ++++.|+++ .+.+++.|+++++++|++||+++||||||||||+||+++. +++.+++.+||||.+
T Consensus 168 ~~~~~~~~g~~-v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~-~~~~~~~~~y~v~~~ 245 (299)
T 1pg5_A 168 LRILTRFRPKL-VYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDE-MEYEKIKGSYIVSLD 245 (299)
T ss_dssp HHHGGGSCCSE-EEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCH-HHHHHHGGGGSBCHH
T ss_pred HHHHHhCCCCE-EEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCH-HHHHHhhcCcccCHH
Confidence 5556788 997 999999988 2446788999999999999999999999999999997543 567777889999999
Q ss_pred HHhhcCCCcEEeCCCCCCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 178 VLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 178 lL~~ak~daivMHpLPRg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
+|+.+++|++||||||||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 246 ~l~~a~~~ai~mH~lPrg~EI~~eV~d~p~s~vf~QaeNrl~~r~AlL~~ll~~ 299 (299)
T 1pg5_A 246 LANKMKKDSIILHPLPRVNEIDRKVDKTTKAKYFEQASYGVPVRMSILTKIYGE 299 (299)
T ss_dssp HHHTSCTTCEEECCSCCSSSBCGGGGGSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCCEEECCCCCCCccCHHHhCCcccHHHHHHHhCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999874
No 2
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=3.6e-38 Score=287.12 Aligned_cols=128 Identities=38% Similarity=0.585 Sum_probs=115.8
Q ss_pred HHHHhcCCcccccccchHhH------HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVD 175 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt 175 (232)
+..+..||++ ++++.|+++ .+.+++.|+++++++|++||+++||||||||||+||+++. +++.+++.+||||
T Consensus 174 ~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~-~~~~~~~~~y~v~ 251 (308)
T 1ml4_A 174 AEALTFYDVE-LYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDE-QEYLKVKGSYQVN 251 (308)
T ss_dssp HHHGGGSCEE-EEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSH-HHHHTTTTCCCBC
T ss_pred HHHHHHCCCE-EEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCH-HHHHHHhcCcccC
Confidence 5556789997 999999766 4566788999999999999999999999999999997543 5666777899999
Q ss_pred HHHHhhcCCCcEEeCCCCCCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 176 QNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 176 ~elL~~ak~daivMHpLPRg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
.++|+.+++|++||||||||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 252 ~~ll~~a~~~ai~mH~lPrg~EI~~eV~d~p~s~if~QaeNrl~~r~AlL~~ll~~ 307 (308)
T 1ml4_A 252 LKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLGV 307 (308)
T ss_dssp TTGGGGSCTTCEEECCSCCSSSBCGGGGGSTTBCHHHHHHTHHHHHHHHHHHHHTC
T ss_pred HHHHhhcCCCCEEECCCCCCCeecHHHhCCCchHHHHHHhcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999875
No 3
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=100.00 E-value=7.6e-38 Score=285.32 Aligned_cols=127 Identities=35% Similarity=0.650 Sum_probs=102.4
Q ss_pred HHHHhcC-CcccccccchHhH------HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCcc
Q 026861 102 VIEAQQF-DRDILNAIFEDDI------KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIV 174 (232)
Q Consensus 102 li~A~~~-~~~~l~v~~p~di------~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~V 174 (232)
+..+..| |++ ++++.|+++ .+.+++.|+++++++|++||+++||||||||||.||+ + .+++.+++.+|||
T Consensus 173 ~~~~~~~~g~~-v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~-~-~~~~~~~~~~y~v 249 (310)
T 3csu_A 173 TQALAKFDGNR-FYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERL-D-PSEYANVKAQFVL 249 (310)
T ss_dssp HHHHHTSSSCE-EEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-------------------CCB
T ss_pred HHHHHhCCCCE-EEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcccccc-C-HHHHHHHhhccCC
Confidence 5556788 997 999999766 3667788999999999999999999999999999987 2 3556667789999
Q ss_pred CHHHHhhcCCCcEEeCCCCCCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 175 DQNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 175 t~elL~~ak~daivMHpLPRg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
|.++|+.+++|++||||||||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 250 ~~~ll~~a~~~ai~mH~lPrg~EI~~eV~d~p~s~vf~QaeNrl~~r~AlL~~ll~~ 306 (310)
T 3csu_A 250 RASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR 306 (310)
T ss_dssp CGGGGTTCCTTCEEECCSCCSSSBCHHHHTSTTBCHHHHHHTHHHHHHHHHHHHHSS
T ss_pred CHHHHhhcCCCCEEECCCCCCCeecHHHhCCCccHHHHHHHhCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999974
No 4
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=100.00 E-value=4.4e-37 Score=280.70 Aligned_cols=130 Identities=20% Similarity=0.283 Sum_probs=116.9
Q ss_pred HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGK 171 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~ 171 (232)
+..+..||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||+||+||++.+.+++.+++.+
T Consensus 172 ~~~~~~~g~~-v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~ 250 (315)
T 1pvv_A 172 MIAGTKLGAD-VVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRP 250 (315)
T ss_dssp HHHHHHTTCE-EEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGG
T ss_pred HHHHHHCCCE-EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHh
Confidence 5556788987 999998654 23 334789999999999999999999999999999876556677889999
Q ss_pred CccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcCC
Q 026861 172 YIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVGW 232 (232)
Q Consensus 172 Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~~ 232 (232)
|+||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++++|
T Consensus 251 y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~eV~d~p~s~vf~QaeNrl~~r~AlL~~ll~~~ 313 (315)
T 1pvv_A 251 FQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGGI 313 (315)
T ss_dssp GCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHhhcCCCcEEECCCCCCCCCccCHHHhCCCccHHHHHHhhCHHHHHHHHHHHhccc
Confidence 9999999999999999999999 899999999999999999999999999999999999875
No 5
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=100.00 E-value=6.6e-37 Score=278.62 Aligned_cols=125 Identities=34% Similarity=0.635 Sum_probs=113.9
Q ss_pred HHHHhcC-CcccccccchHhH------HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCcc
Q 026861 102 VIEAQQF-DRDILNAIFEDDI------KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIV 174 (232)
Q Consensus 102 li~A~~~-~~~~l~v~~p~di------~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~V 174 (232)
+..+..| |++ ++++.|+++ .+.+++.|+++++++|++||+++||||||+|||+||+++. ++|.+.+.+|||
T Consensus 170 ~~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~-~e~~~~~~~y~v 247 (306)
T 4ekn_B 170 VYALSLFENVE-MYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDP-NEYEKVKGSYKI 247 (306)
T ss_dssp HHHHHTSSSCE-EEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCCGGGCCSH-HHHHHHHHHHCB
T ss_pred HHHHHhcCCCE-EEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcccccCCCH-HHHHHhccCcEE
Confidence 5556789 997 999999766 3566789999999999999999999999999999998654 567778889999
Q ss_pred CHHHHhhcCCCcEEeCCCCCCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhc
Q 026861 175 DQNVLQVMEKHAVVLHPLPRLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230 (232)
Q Consensus 175 t~elL~~ak~daivMHpLPRg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg 230 (232)
|.++|+. +|++||||||||+||++||+++|+|+||+||+||+|+|||||.+++|
T Consensus 248 ~~~~l~~--~~ai~mH~lPRg~EI~~eV~d~p~s~vf~QaeNrl~~r~AlL~~ll~ 301 (306)
T 4ekn_B 248 KREYVEG--KKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIE 301 (306)
T ss_dssp CHHHHTT--CCCEEECCSCCSSSBCGGGTTSTTBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHcC--CCCEEECCCCCCCeecHhHhCCCcccHHHHHhcCHHHHHHHHHHHhc
Confidence 9999987 89999999999999999999999999999999999999999999997
No 6
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=100.00 E-value=6.7e-37 Score=280.52 Aligned_cols=129 Identities=22% Similarity=0.296 Sum_probs=108.5
Q ss_pred HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGK 171 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~ 171 (232)
+..+..||++ ++++.|+++ .+ ++++.|.++++++|++||+++||||||||||+||++++.+++.+++.+
T Consensus 174 ~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~ 252 (323)
T 3gd5_A 174 LLGCAKVGMS-IAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQ 252 (323)
T ss_dssp HHHHHHHTCE-EEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTT
T ss_pred HHHHHHcCCE-EEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhc
Confidence 5556788997 999999754 22 334679999999999999999999999999999986554567789999
Q ss_pred CccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 172 YIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 172 Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
||||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 253 y~vt~ell~~ak~dai~mHclPa~Rg~EI~~eV~d~p~S~if~QaeNrl~~r~AlL~~ll~~ 314 (323)
T 3gd5_A 253 YQINAALLNCAAAEAIVLHCLPAHRGEEITDEVMEGPRSRIWDEAENRLHAQKAVLAALMGG 314 (323)
T ss_dssp CCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCHHHHhhcCCCcEEECCCCCCCCceeCHHHhCCCchhHHHHHhccHHHHHHHHHHHhcc
Confidence 9999999999999999999999 99999999999999999999999999999999999973
No 7
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=100.00 E-value=9.8e-37 Score=281.15 Aligned_cols=128 Identities=18% Similarity=0.200 Sum_probs=109.8
Q ss_pred HHHHhcCCcccccccchHhH------H----HHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------K----DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGK 171 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~----e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~ 171 (232)
+..++.||++ ++++.|+++ . +++++.|+++++++|++||+++||||||+|||+||++++ .++.+++.+
T Consensus 196 ~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~-~~~~~~~~~ 273 (340)
T 4ep1_A 196 LLASAKVGMH-MTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGE-EEKYTLFQP 273 (340)
T ss_dssp HHHHHHHTCE-EEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CH-HHHHHHHGG
T ss_pred HHHHHHcCCE-EEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCch-HHHHHHhcc
Confidence 5556788987 999998654 2 234578999999999999999999999999999998765 567788899
Q ss_pred CccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 172 YIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 172 Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
|+||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 274 y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~eV~d~p~S~if~QaeNrl~~rmAlL~~ll~~ 335 (340)
T 4ep1_A 274 YQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALLVSLFKN 335 (340)
T ss_dssp GCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHhcCCCcEEECCCCCCCCceeCHHHhCCCchhHHHHHhcCHHHHHHHHHHHhcc
Confidence 9999999999999999999999 99999999999999999999999999999999999974
No 8
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=100.00 E-value=5.7e-36 Score=272.63 Aligned_cols=129 Identities=21% Similarity=0.252 Sum_probs=114.2
Q ss_pred HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGK 171 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~ 171 (232)
+..+..||++ ++++.|+++ .+ ++++.|+.+++++|++||+++|||||||+|++++.+.+.+++.+++.+
T Consensus 163 ~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~ 241 (307)
T 3tpf_A 163 LITAAILGFE-ISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEG 241 (307)
T ss_dssp HHHHHHHTCE-EEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGG
T ss_pred HHHHHHcCCE-EEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcc
Confidence 4455778886 899988654 22 334789999999999999999999999999988765445667788999
Q ss_pred CccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 172 YIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 172 Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
||||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 242 y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~eV~d~p~s~if~QaeNrl~~r~AlL~~ll~~ 303 (307)
T 3tpf_A 242 FMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEKHADVIFEEARNRLYVVKALLCFLDNQ 303 (307)
T ss_dssp GCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCHHHHHhcCCCcEEECCCCCCCCceeCHHHhCCCcchHHHHHHcCHHHHHHHHHHHhhh
Confidence 9999999999999999999999 99999999999999999999999999999999999974
No 9
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=100.00 E-value=2.9e-35 Score=267.89 Aligned_cols=144 Identities=21% Similarity=0.195 Sum_probs=121.1
Q ss_pred cccccccCCc--ccHHH-HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccc
Q 026861 87 STPSFTIGKK--FQLDD-VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRI 153 (232)
Q Consensus 87 ~~~~~~~g~~--~~~~~-li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrw 153 (232)
++.+-=.||+ .-+|+ +..+..||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||+|
T Consensus 148 gl~va~vGD~~~rva~Sl~~~~~~~g~~-v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 148 GLRLSYFGDGANNMAHSLLLGGVTAGIH-VTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTW 226 (307)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHTTCE-EEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCS
T ss_pred CeEEEEECCCCcCcHHHHHHHHHHCCCE-EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecce
Confidence 3334444554 33345 5555789997 999999755 23 333789999999999999999999999999
Q ss_pred cccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 154 QRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 154 q~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
++|+++.+.+++.+++.+|+||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 227 ~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~eV~d~p~s~if~QaeN~l~~r~AlL~~ll~~ 306 (307)
T 2i6u_A 227 TSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLER 306 (307)
T ss_dssp SCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCHhHhCCcccHHHHHHhcCHHHHHHHHHHHhcc
Confidence 9998755445566788999999999999999999999999 89999999999999999999999999999999999875
No 10
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=100.00 E-value=5.1e-35 Score=268.21 Aligned_cols=127 Identities=17% Similarity=0.207 Sum_probs=106.7
Q ss_pred HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGK 171 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~ 171 (232)
+..+..||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||+||+||++.+.+++.+++.+
T Consensus 185 ~~~~~~~G~~-v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~ 263 (325)
T 1vlv_A 185 MIACAKMGMN-FVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKP 263 (325)
T ss_dssp HHHHHHTTCE-EEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGG
T ss_pred HHHHHHCCCE-EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhh
Confidence 5556789997 999999765 22 334789999999999999999999999999999875545566788999
Q ss_pred CccCHHHHhhc-CCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHh
Q 026861 172 YIVDQNVLQVM-EKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLL 229 (232)
Q Consensus 172 Y~Vt~elL~~a-k~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lL 229 (232)
|+||.++|+.+ ++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++
T Consensus 264 y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~eV~d~p~S~if~QaeNrl~~rmAlL~~ll 324 (325)
T 1vlv_A 264 YQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKHTIKAVMIATL 324 (325)
T ss_dssp GCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHhccCCCeEEECCCCCCCCcccCHHHhCCCcchHHHHHhccHHHHHHHHHHHh
Confidence 99999999999 99999999999 899999999999999999999999999999999886
No 11
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=100.00 E-value=2e-34 Score=265.05 Aligned_cols=146 Identities=16% Similarity=0.105 Sum_probs=125.0
Q ss_pred eccccccccCCc--ccHHH-HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEc
Q 026861 85 TQSTPSFTIGKK--FQLDD-VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQT 151 (232)
Q Consensus 85 ~~~~~~~~~g~~--~~~~~-li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtd 151 (232)
++++.+-=.||+ .-+|+ +..++.||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||
T Consensus 153 l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~-v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 153 FNEMTLVYAGDARNNMGNSMLEAAALTGLD-LRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp GGGCEEEEESCTTSHHHHHHHHHHHHHCCE-EEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCcEEEEECCCccchHHHHHHHHHHcCCE-EEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 445555557886 44466 4555788997 999999765 22 3348999999999999999999999999
Q ss_pred cccccccCCC-chHHHHhhcCCccCHHHHhhc-CCCcEEeCCCC--------------------CCccccccccCCCCch
Q 026861 152 RIQRERFGER-TDLYEEARGKYIVDQNVLQVM-EKHAVVLHPLP--------------------RLDEITVDVDADPRAA 209 (232)
Q Consensus 152 rwq~Er~~~~-~~~~~~~~~~Y~Vt~elL~~a-k~daivMHpLP--------------------Rg~EIt~eV~d~p~S~ 209 (232)
+|++|+++.+ ..++.+++.+||||.++|+.+ ++|++|||||| ||+||++||+++|+|+
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP~~h~~~t~~~~~~~~~~~~~Rg~EIt~eV~d~p~S~ 311 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASI 311 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCCSSCSHHHHHHHHHTTCCSBSSBBHHHHTSTTBC
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCCCCCccccccchhhhccccCCCCceeCHHHhCCCcch
Confidence 9999987655 456778999999999999999 99999999999 6899999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHhcC
Q 026861 210 YFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 210 if~QAeNrl~vRmALL~~lLg~ 231 (232)
||+||+||+|+|||||.+++++
T Consensus 312 vf~QaeNrl~~r~AlL~~ll~~ 333 (333)
T 1duv_G 312 VFDQAENRMHTIKAVMVATLSK 333 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhccHHHHHHHHHHHhcC
Confidence 9999999999999999999874
No 12
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=100.00 E-value=1.7e-35 Score=269.75 Aligned_cols=129 Identities=22% Similarity=0.301 Sum_probs=106.3
Q ss_pred HHHHhcCCcccccccchHhHH---HH-HHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHH
Q 026861 102 VIEAQQFDRDILNAIFEDDIK---DY-LTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQN 177 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di~---e~-l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~e 177 (232)
+..+..||++ ++++.|+++. +. .++.|.++++++|++||+++||||||++|.+++.+.+.+++.+++.+||||.+
T Consensus 171 ~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~ 249 (309)
T 4f2g_A 171 IQAARILDFK-LQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEE 249 (309)
T ss_dssp HHHHHHHTCE-EEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHH
T ss_pred HHHHHHcCCE-EEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHH
Confidence 5566788987 9999998872 22 23678899999999999999999999999988764434556678899999999
Q ss_pred HHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 178 VLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 178 lL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
+|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 250 ~l~~a~~~ai~mH~lP~~Rg~EI~~eV~d~p~s~if~QaeN~l~~r~AlL~~ll~~ 305 (309)
T 4f2g_A 250 MMSHANSDALFMHCLPAHRGEEVTAGVIDGPQSVVWDEAENRLHVQKALMEFLLLG 305 (309)
T ss_dssp HHTTSCTTCEEEECSSCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCeEEECCCCCCCCceecHHHhCCCcchHHHHHHcCHHHHHHHHHHHHhh
Confidence 9999999999999999 99999999999999999999999999999999999974
No 13
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=100.00 E-value=2.6e-34 Score=264.42 Aligned_cols=146 Identities=17% Similarity=0.133 Sum_probs=125.1
Q ss_pred eccccccccCCc--ccHHH-HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEc
Q 026861 85 TQSTPSFTIGKK--FQLDD-VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQT 151 (232)
Q Consensus 85 ~~~~~~~~~g~~--~~~~~-li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtd 151 (232)
++++.+-=.||+ .-+|+ +..++.||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||
T Consensus 153 l~gl~va~vGD~~~~va~Sl~~~~~~~G~~-v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 153 LHDISYAYLGDARNNMGNSLLLIGAKLGMD-VRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp GGGCEEEEESCCSSHHHHHHHHHHHHTTCE-EEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred cCCeEEEEecCCccchHHHHHHHHHHcCCE-EEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 444555556886 44456 5555789997 999999765 22 3337899999999999999999999999
Q ss_pred cccccccCCC-chHHHHhhcCCccCHHHHhhc-CCCcEEeCCCC---------------------CCccccccccCCCCc
Q 026861 152 RIQRERFGER-TDLYEEARGKYIVDQNVLQVM-EKHAVVLHPLP---------------------RLDEITVDVDADPRA 208 (232)
Q Consensus 152 rwq~Er~~~~-~~~~~~~~~~Y~Vt~elL~~a-k~daivMHpLP---------------------Rg~EIt~eV~d~p~S 208 (232)
+|++|+++.+ ..++.+++.+||||.++|+.+ ++|++|||||| ||+||++||+++|+|
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP~~h~~~t~~~~~~~~~~~~~~Rg~EIt~eV~d~p~S 311 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYN 311 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSCCCCSSSSHHHHHHHHHCGGGGGBSSBBHHHHTSTTB
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCCCCCccccccchhhhhhcccCCCCcEecHHHhCCccc
Confidence 9999987655 466778999999999999999 99999999999 689999999999999
Q ss_pred hHHHHHhhCHHHHHHHHHHHhcC
Q 026861 209 AYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 209 ~if~QAeNrl~vRmALL~~lLg~ 231 (232)
+||+||+||+|+|||||.+++++
T Consensus 312 ~vf~QaeNrl~~r~AlL~~ll~~ 334 (335)
T 1dxh_A 312 IAFEQAENRMHTIKAILVSTLAD 334 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHhhhHHHHHHHHHHHhhc
Confidence 99999999999999999999874
No 14
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00 E-value=1.8e-34 Score=264.78 Aligned_cols=146 Identities=21% Similarity=0.239 Sum_probs=118.3
Q ss_pred eccccccccCCccc--HHH-HHHHhcCCcccccccchHhHH--------H----HHHh--CCCEEEEEcCHHHhhccCCE
Q 026861 85 TQSTPSFTIGKKFQ--LDD-VIEAQQFDRDILNAIFEDDIK--------D----YLTS--QGVEWEESADLMEVASKCDV 147 (232)
Q Consensus 85 ~~~~~~~~~g~~~~--~~~-li~A~~~~~~~l~v~~p~di~--------e----~l~~--~G~~i~~~~dleEAl~~ADV 147 (232)
++++.+-=.||+.+ +|+ +..+..||++ ++++.|+++. + ++++ .|+++++++|++||+++|||
T Consensus 159 l~gl~va~vGD~~~~va~Sl~~~~~~~G~~-v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 159 FKGIKFAYCGDSMNNVTYDLMRGCALLGME-CHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp GGGCCEEEESCCSSHHHHHHHHHHHHHTCE-EEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred cCCcEEEEeCCCCcchHHHHHHHHHHcCCE-EEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 44455555677643 346 5556789997 9999987543 2 2334 79999999999999999999
Q ss_pred EEEccccccc-cCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHH
Q 026861 148 VYQTRIQRER-FGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMAL 224 (232)
Q Consensus 148 VYtdrwq~Er-~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmAL 224 (232)
||||+|.++| +.++.+++.+++.+||||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+||||
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~eV~d~p~S~if~QaeNrl~~r~Al 317 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAV 317 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHH
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHHHhCCCchhHHHHHhhCHHHHHHH
Confidence 9999998887 444445677889999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHhcC
Q 026861 225 LKLLLVG 231 (232)
Q Consensus 225 L~~lLg~ 231 (232)
|.++++.
T Consensus 318 L~~ll~~ 324 (328)
T 3grf_A 318 LDFFLHD 324 (328)
T ss_dssp HHHHHSC
T ss_pred HHHHHhh
Confidence 9999973
No 15
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=100.00 E-value=1e-33 Score=262.25 Aligned_cols=145 Identities=17% Similarity=0.169 Sum_probs=124.0
Q ss_pred eccccccccCCccc--HHH-HHHHhcCCcccccccchHhH----------HHHHHhCCCEEEEEcCHHHhhccCCEEEEc
Q 026861 85 TQSTPSFTIGKKFQ--LDD-VIEAQQFDRDILNAIFEDDI----------KDYLTSQGVEWEESADLMEVASKCDVVYQT 151 (232)
Q Consensus 85 ~~~~~~~~~g~~~~--~~~-li~A~~~~~~~l~v~~p~di----------~e~l~~~G~~i~~~~dleEAl~~ADVVYtd 151 (232)
++++.+-=.||+.+ +++ +..+..||++ ++++.|+++ .+++.+.|.++++++|++||+++||||||+
T Consensus 179 l~gl~ia~vGD~~~~va~S~~~~~~~~g~~-v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~ 257 (358)
T 4h31_A 179 LADIQFAYLGDARNNVGNSLMVGAAKMGMD-IRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTD 257 (358)
T ss_dssp GGGCEEEEESCTTSHHHHHHHHHHHHHTCE-EEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred cCceEEEecCCCCcccchHHHHHHHhcCce-EEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEE
Confidence 44455555677632 455 6666889997 999998755 134567899999999999999999999999
Q ss_pred cccccccCCCc-hHHHHhhcCCccCHHHHhh-cCCCcEEeCCCC-------------------CCccccccccCCCCchH
Q 026861 152 RIQRERFGERT-DLYEEARGKYIVDQNVLQV-MEKHAVVLHPLP-------------------RLDEITVDVDADPRAAY 210 (232)
Q Consensus 152 rwq~Er~~~~~-~~~~~~~~~Y~Vt~elL~~-ak~daivMHpLP-------------------Rg~EIt~eV~d~p~S~i 210 (232)
+||+||++.+. +++.+++.+||||.++|+. ++||++|||||| ||+||++||+++|+|+|
T Consensus 258 ~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~LP~~~n~~~~~~~~~~~~~~~RG~EIt~eV~d~~~S~i 337 (358)
T 4h31_A 258 VWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGMKGLEVTEEVFESEHSIV 337 (358)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECSCCCCSSSSHHHHHHHHHTTCSCSSBCHHHHTSTTBCH
T ss_pred EEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCCCCCCCcccccchhhhhccCCCceEECHHHhCCCccHH
Confidence 99999987653 6677899999999999986 589999999999 57899999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHhc
Q 026861 211 FRQAKNGLYIRMALLKLLLV 230 (232)
Q Consensus 211 f~QAeNrl~vRmALL~~lLg 230 (232)
|+||+||+|+|||||.++||
T Consensus 338 f~QaeNrl~~r~AlL~~lLG 357 (358)
T 4h31_A 338 FDEAENRMHTIKAVMVATLG 357 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhhHHHHHHHHHHHhC
Confidence 99999999999999999998
No 16
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=7.2e-34 Score=258.19 Aligned_cols=126 Identities=21% Similarity=0.163 Sum_probs=102.9
Q ss_pred HHHHhcCCcccccccchHhH---HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHH
Q 026861 102 VIEAQQFDRDILNAIFEDDI---KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNV 178 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di---~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~el 178 (232)
+..+..||++ ++++.|+++ .+.+...+ +++++|++||+++|||||||+||+++.+.+..++.+++.+|+||.++
T Consensus 171 ~~~~~~~g~~-v~~~~P~~~~~~~~~~~~~~--~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~ 247 (301)
T 2ef0_A 171 LEVAPLAGLK-VRVATPKGYEPDPGLLKRAN--AFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGEL 247 (301)
T ss_dssp HHHHHHHTCE-EEEECCTTCCCCHHHHHHHT--CEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHH
T ss_pred HHHHHHcCCE-EEEECCchhcCCHHHHhhce--eEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHH
Confidence 4445678886 888888766 12222223 66899999999999999999999977654445566889999999999
Q ss_pred HhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhc
Q 026861 179 LQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230 (232)
Q Consensus 179 L~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg 230 (232)
|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.++++
T Consensus 248 l~~a~~~ai~mHplP~~Rg~EI~~eV~d~p~s~if~QaeN~l~~rmAlL~~ll~ 301 (301)
T 2ef0_A 248 LKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRVFDQAENRLHTAKAVLLTLLK 301 (301)
T ss_dssp HTTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCcEEECCCCCCCCCccCHHHhCCCcchHHHHHhcCHHHHHHHHHHHhC
Confidence 999999999999999 8999999999999999999999999999999999875
No 17
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=100.00 E-value=3.3e-33 Score=259.25 Aligned_cols=131 Identities=23% Similarity=0.305 Sum_probs=113.4
Q ss_pred HHH-HHHHhcCCcccccccchH-hH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEcccccccc-C--CCch
Q 026861 99 LDD-VIEAQQFDRDILNAIFED-DI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERF-G--ERTD 163 (232)
Q Consensus 99 ~~~-li~A~~~~~~~l~v~~p~-di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~-~--~~~~ 163 (232)
+++ +..+..||++ ++++.|+ ++ .+ ++++.|.++++++|++||+++||||||++||+||+ + ++.+
T Consensus 209 a~Sl~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~ 287 (359)
T 1zq6_A 209 ANSALTIATRMGMD-VTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEK 287 (359)
T ss_dssp HHHHHHHHHHTTCE-EEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHH
T ss_pred HHHHHHHHHHcCCE-EEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhH
Confidence 356 5555789997 9999998 54 22 33478999999999999999999999999999653 3 2346
Q ss_pred HHHHhhcCCccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 164 LYEEARGKYIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 164 ~~~~~~~~Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
++.+++.+|+||.++|+.++ |++|||||| ||+||++||+++|+|+||+||+||+|+|||||.++|++
T Consensus 288 ~~~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~eV~d~p~S~if~QaeNrl~~r~AlL~~ll~~ 356 (359)
T 1zq6_A 288 PIRDQYQHFIVDERKMALTN-NGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALVGQ 356 (359)
T ss_dssp HHHGGGGGGSBCHHHHHTSS-SCEEECCSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhcCCCCCHHHHHhCC-CCEEECCCCCCCCceeCHHHhCCCcchHHHHHhcCHHHHHHHHHHHhcc
Confidence 67889999999999999999 999999999 99999999999999999999999999999999999874
No 18
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=100.00 E-value=2.4e-33 Score=260.69 Aligned_cols=142 Identities=20% Similarity=0.133 Sum_probs=119.7
Q ss_pred ccccccCCccc--HHH-HHHHhcCCcccccccchHhH-H-----------HHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 88 TPSFTIGKKFQ--LDD-VIEAQQFDRDILNAIFEDDI-K-----------DYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 88 ~~~~~~g~~~~--~~~-li~A~~~~~~~l~v~~p~di-~-----------e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
+.+-=.||+.+ +++ +..++.||++ ++++.|+++ + +++++.|.++++++|++||+++|||||||+
T Consensus 181 lkva~vGD~~nnva~Sl~~~~~~lG~~-v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~ 259 (365)
T 4amu_A 181 KKIVFIGDYKNNVGVSTMIGAAFNGMH-VVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDV 259 (365)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHTTCE-EEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECC
T ss_pred CEEEEECCCCcchHHHHHHHHHHcCCE-EEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecc
Confidence 33333455433 345 5566789997 999998654 2 235678999999999999999999999999
Q ss_pred ccccccCCC-chHHHHhhcCCccCHHHHhhcCCCcEEeCCCC--C------------------------CccccccccCC
Q 026861 153 IQRERFGER-TDLYEEARGKYIVDQNVLQVMEKHAVVLHPLP--R------------------------LDEITVDVDAD 205 (232)
Q Consensus 153 wq~Er~~~~-~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLP--R------------------------g~EIt~eV~d~ 205 (232)
|.+++.+.+ ..++.+++.+||||.++|+.+++|++|||||| | |+||++||+++
T Consensus 260 W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP~~R~~~t~~~~~~~~~~~~~~~~~~~~g~EIt~eV~d~ 339 (365)
T 4amu_A 260 WVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLPAFHDDHTSFSKEVATTLGAKYPIVAKGEMEVTDEVFQS 339 (365)
T ss_dssp SCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSCCCCSSCSHHHHHHHHHSSSSCGGGGGSCCSBCHHHHHS
T ss_pred cccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCccccchhhhhhhhcccccccccCCCcEecHHHhCC
Confidence 998876544 35677889999999999999999999999999 6 99999999999
Q ss_pred CCchHHHHHhhCHHHHHHHHHHHhc
Q 026861 206 PRAAYFRQAKNGLYIRMALLKLLLV 230 (232)
Q Consensus 206 p~S~if~QAeNrl~vRmALL~~lLg 230 (232)
|+|+||+|||||+|+|||||.++||
T Consensus 340 p~S~if~QaeNrl~~~kAvL~~llg 364 (365)
T 4amu_A 340 LHNKAFDQAENRMHSIKAIILSTIG 364 (365)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcchhHhHHhcCHHHHHHHHHHHhc
Confidence 9999999999999999999999986
No 19
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=100.00 E-value=2.2e-33 Score=260.36 Aligned_cols=144 Identities=16% Similarity=0.174 Sum_probs=121.3
Q ss_pred ccccccccCCc--ccHHH-HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 86 QSTPSFTIGKK--FQLDD-VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 86 ~~~~~~~~g~~--~~~~~-li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
+++.+-=.||+ .-+++ +..++.||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||+
T Consensus 175 ~gl~va~vGD~~~rva~Sl~~~~~~lG~~-v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 253 (359)
T 2w37_A 175 QGLTLTFMGDGRNNVANSLLVTGAILGVN-IHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDV 253 (359)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHHTCE-EEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCeEEEEECCCccchHHHHHHHHHHcCCE-EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcc
Confidence 33444445664 33345 5555789997 999999765 22 33378999999999999999999999999
Q ss_pred ccccccCCCchHHHHhhcCCccCHHHHhhcC---CCcEEeCCCC-------------------CCccccccccCCCCchH
Q 026861 153 IQRERFGERTDLYEEARGKYIVDQNVLQVME---KHAVVLHPLP-------------------RLDEITVDVDADPRAAY 210 (232)
Q Consensus 153 wq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak---~daivMHpLP-------------------Rg~EIt~eV~d~p~S~i 210 (232)
|++++.+ +.+++.+++.+|+||.++|+.++ +|++|||||| ||+||++||+++|+|+|
T Consensus 254 w~smg~e-e~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP~~h~~~t~~g~~~~~~~~~Rg~EIt~eV~d~p~S~v 332 (359)
T 2w37_A 254 WVSMGES-NWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLPAFHNTDTQYGKEIKEKYGITEMEVTDEVFTSKYARQ 332 (359)
T ss_dssp SCCTTCT-THHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSCCCCSSCSHHHHHHHHHHCCCCCSBCHHHHTSTTBCH
T ss_pred ccccccc-chHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCCCCcccccccchhhhhccCCCCceecHHHhCCCcchH
Confidence 9988765 45667789999999999999999 9999999999 68999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHhcC
Q 026861 211 FRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 211 f~QAeNrl~vRmALL~~lLg~ 231 (232)
|+||+||+|+|||||.+++++
T Consensus 333 f~QaeNrl~~r~AlL~~ll~~ 353 (359)
T 2w37_A 333 FEEAENRMHSIKAMMAATLGN 353 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhhhHHHHHHHHHHHHcc
Confidence 999999999999999999974
No 20
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=100.00 E-value=5.1e-33 Score=257.14 Aligned_cols=128 Identities=21% Similarity=0.250 Sum_probs=109.6
Q ss_pred HHHHhcCCcccccccchH-hH------H----HHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCc---hHHHH
Q 026861 102 VIEAQQFDRDILNAIFED-DI------K----DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERT---DLYEE 167 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~-di------~----e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~---~~~~~ 167 (232)
+..+..||++ +++++|+ ++ . +.+.+.|.++++++|++||+++||||||||||+||+.+.. ....+
T Consensus 213 ~~~~~~~g~~-v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r~q~~r~~~~~~~~~~~~~ 291 (359)
T 3kzn_A 213 LTIATRMGMD-VTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRD 291 (359)
T ss_dssp HHHHHHTTCE-EEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHG
T ss_pred HHHHHhcccc-EEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEEEEEeecccchhhhHHHHH
Confidence 4556788997 9999984 22 2 3456789999999999999999999999999999986442 22457
Q ss_pred hhcCCccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 168 ARGKYIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 168 ~~~~Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
++.+|+||+++|+.+ +|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.++||+
T Consensus 292 ~~~~y~v~~~l~~~~-~~ai~MHplP~~Rg~EI~~eV~d~p~S~if~QaeNgl~vrmAlL~~llG~ 356 (359)
T 3kzn_A 292 QYQHFIVDERKMALT-NNGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALVGQ 356 (359)
T ss_dssp GGGGGSBCHHHHHTS-SSCEEECCSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHhccChHHHHhcCC-CCCEEECCCCCCCCCCcCHHHHCCCcchHHHHHHhhHHHHHHHHHHHhCC
Confidence 888999999999854 6999999999 99999999999999999999999999999999999985
No 21
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=100.00 E-value=7.5e-34 Score=258.45 Aligned_cols=123 Identities=27% Similarity=0.341 Sum_probs=102.5
Q ss_pred HHHHhcCCcccccccchHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhh
Q 026861 102 VIEAQQFDRDILNAIFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ 181 (232)
+..+..||++ ++++.|+++.-...+.| .++|++||+++||||||+|||+||+++.. ++.+++.+||||.++|+.
T Consensus 166 ~~~~~~~G~~-v~~~~P~~~~~~~~~~g----~~~d~~eav~~aDvvyt~~~q~er~~~~~-~~~~~~~~y~v~~~~l~~ 239 (304)
T 3r7f_A 166 AEVLTRLGAR-VLFSGPSEWQDEENTFG----TYVSMDEAVESSDVVMLLRIQNERHQSAV-SQEGYLNKYGLTVERAER 239 (304)
T ss_dssp HHHHHHTTCE-EEEESCGGGSCTTCSSC----EECCHHHHHHHCSEEEECCCCTTTCCSSC-CSTTHHHHHSBCHHHHTT
T ss_pred HHHHHHcCCE-EEEECCCccCcchhhcC----ccCCHHHHhCCCCEEEeccchhhccccch-hHHHHhCCCccCHHHHhh
Confidence 4445667775 77777776621111223 46899999999999999999999985432 344668889999999999
Q ss_pred cCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhc
Q 026861 182 MEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230 (232)
Q Consensus 182 ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg 230 (232)
+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.++++
T Consensus 240 a~~~ai~mHclP~~Rg~EI~~eV~d~p~S~vf~QaeNrl~~r~AlL~~ll~ 290 (304)
T 3r7f_A 240 MKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQRALQ 290 (304)
T ss_dssp SCTTCEEECCSCCCBTTTBCGGGTTSTTBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEECCCCCCCCceeCHHHhCCCchhHHHHHhccHHHHHHHHHHHhc
Confidence 999999999999 9999999999999999999999999999999999996
No 22
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=99.98 E-value=1e-32 Score=254.26 Aligned_cols=130 Identities=17% Similarity=0.147 Sum_probs=113.0
Q ss_pred HH-HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCc-hHHHH
Q 026861 100 DD-VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERT-DLYEE 167 (232)
Q Consensus 100 ~~-li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~-~~~~~ 167 (232)
++ +..++.||++ ++++.|+++ .+ ++++.|.++++++|++ |+++||||||++|.+++..++. +++.+
T Consensus 189 ~Sl~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~ 266 (339)
T 4a8t_A 189 FSLGLITTKMGMN-FVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMK 266 (339)
T ss_dssp HHHHHHHHHTTCE-EEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHH
T ss_pred HHHHHHHHHcCCE-EEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHH
Confidence 45 5556788987 999998654 22 3456899999999999 9999999999999987665544 56667
Q ss_pred hhcC-CccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 168 ARGK-YIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 168 ~~~~-Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
++.+ ||||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++|+
T Consensus 267 ~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~eV~d~p~S~if~QaeNrl~~r~AlL~~ll~~ 333 (339)
T 4a8t_A 267 VFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTSIRGLLVYLMND 333 (339)
T ss_dssp HHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHHHhCCCcchHHHHHhcCHHHHHHHHHHHHHH
Confidence 7777 9999999999999999999999 99999999999999999999999999999999999873
No 23
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=99.98 E-value=1.1e-32 Score=252.32 Aligned_cols=129 Identities=24% Similarity=0.272 Sum_probs=109.3
Q ss_pred HHHHhcCCcccccccchHhH------HH----HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcC
Q 026861 102 VIEAQQFDRDILNAIFEDDI------KD----YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGK 171 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di------~e----~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~ 171 (232)
+..+..||++ ++++.|+++ .+ ++++.|+++++++|++||+++|||||||+|.+++.+.+..++.+++.+
T Consensus 172 ~~~~~~~G~~-v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~ 250 (321)
T 1oth_A 172 MMSAAKFGMH-LQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQG 250 (321)
T ss_dssp HTTTGGGTCE-EEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTT
T ss_pred HHHHHHcCCe-EEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccC
Confidence 4445688986 999998755 22 333689999999999999999999999999887653322333456889
Q ss_pred CccCHHHHhhcCCCcEEeCCCCC-CccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 172 YIVDQNVLQVMEKHAVVLHPLPR-LDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 172 Y~Vt~elL~~ak~daivMHpLPR-g~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
|+||.++|+.+++|++||||||+ .+||++||+++|+|+||+||+||+|+|||||.+++++
T Consensus 251 y~v~~~~l~~a~~dai~mH~lP~~r~EI~~eV~d~p~S~if~QaeNrl~~rmAlL~~ll~~ 311 (321)
T 1oth_A 251 YQVTMKTAKVAASDWTFLHCLPRKPEEVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTD 311 (321)
T ss_dssp CCBCHHHHHTSCTTCEEEECSCCCTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceECHHHHhhcCCCCEEECCCCCCCcccCHHHhCCcccHHHHHHHhcHHHHHHHHHHHHhc
Confidence 99999999999999999999993 4999999999999999999999999999999999974
No 24
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=99.97 E-value=1.6e-32 Score=254.24 Aligned_cols=130 Identities=17% Similarity=0.149 Sum_probs=112.8
Q ss_pred HH-HHHHhcCCcccccccchHhH------H----HHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCc-hHHHH
Q 026861 100 DD-VIEAQQFDRDILNAIFEDDI------K----DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERT-DLYEE 167 (232)
Q Consensus 100 ~~-li~A~~~~~~~l~v~~p~di------~----e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~-~~~~~ 167 (232)
++ +..+..||++ ++++.|+++ . +++++.|.++++++|++ |+++||||||++|.++++.++. .++.+
T Consensus 167 ~Sl~~~~~~~G~~-v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~ 244 (355)
T 4a8p_A 167 FSLGLITTKMGMN-FVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMK 244 (355)
T ss_dssp HHHHHHHHHTTCE-EEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHH
T ss_pred HHHHHHHHHcCCE-EEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHH
Confidence 45 5556788987 999998654 2 23456899999999999 9999999999999987655443 56667
Q ss_pred hhcC-CccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 168 ARGK-YIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 168 ~~~~-Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
++.+ |+||.++|+.+++|++|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++|+
T Consensus 245 ~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~eV~d~p~S~if~QaeNrl~~r~AlL~~ll~~ 311 (355)
T 4a8p_A 245 VFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTSIRGLLVYLMND 311 (355)
T ss_dssp HHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHHHhCCCcchHHHHHhcCHHHHHHHHHHHHhh
Confidence 7777 9999999999999999999999 99999999999999999999999999999999999873
No 25
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=99.97 E-value=3.3e-33 Score=252.86 Aligned_cols=123 Identities=18% Similarity=0.179 Sum_probs=101.4
Q ss_pred HHHHhcCCcccccccchHhH-HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccC-CCchHHHHhhcCCccCHHHH
Q 026861 102 VIEAQQFDRDILNAIFEDDI-KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFG-ERTDLYEEARGKYIVDQNVL 179 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di-~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~-~~~~~~~~~~~~Y~Vt~elL 179 (232)
+..+..||++ ++++.|+++ ++.+.+.| +++++|++||+++||||||+++|.||++ ....++.+++.+|+||.++|
T Consensus 165 ~~~~~~~g~~-v~~~~P~~~~p~~~~~~g--~~~~~d~~eav~~aDvvy~~~~q~er~~~~~~~~~~~~~~~y~v~~~~l 241 (291)
T 3d6n_B 165 APLLNMFGAK-IGVCGPKTLIPRDVEVFK--VDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSESSYFKQFGLTKERF 241 (291)
T ss_dssp HHHHHHTTCE-EEEESCGGGSCTTGGGGC--EEEESSHHHHHHHCSEEEECCCCTHHHHTTSSSCHHHHHHHHSBCHHHH
T ss_pred HHHHHHCCCE-EEEECCchhCCchHHHCC--CEEEcCHHHHhCCCCEEEEeCcccCccccccchhHHHHHhhcCcCHHHH
Confidence 4445677775 777777766 22233556 6679999999999999999777777742 22345667888999999999
Q ss_pred hhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhc
Q 026861 180 QVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLV 230 (232)
Q Consensus 180 ~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg 230 (232)
+.++ +|||||| ||+||++||+++|+|+||+||+||+|+|||||.+++|
T Consensus 242 ~~a~---i~mH~lP~~Rg~EI~~eV~d~p~s~if~QaeN~l~~r~AlL~~~l~ 291 (291)
T 3d6n_B 242 EKVK---LYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAIYKFLWT 291 (291)
T ss_dssp TTCC---CEECSSCCCBTTTBCGGGSSSTTBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred Hhcc---cccCCCCCCCCceECHHHhCCcccHHHHHHHhhHHHHHHHHHHHhC
Confidence 9886 9999999 8999999999999999999999999999999999875
No 26
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=99.97 E-value=5.3e-32 Score=250.64 Aligned_cols=144 Identities=15% Similarity=0.157 Sum_probs=114.4
Q ss_pred ccccccccCCcccH-HH-HHHHhcCCcccccccchHhH------HHHHH------hCCCEEEEEcCHHHhhccCCEEEEc
Q 026861 86 QSTPSFTIGKKFQL-DD-VIEAQQFDRDILNAIFEDDI------KDYLT------SQGVEWEESADLMEVASKCDVVYQT 151 (232)
Q Consensus 86 ~~~~~~~~g~~~~~-~~-li~A~~~~~~~l~v~~p~di------~e~l~------~~G~~i~~~~dleEAl~~ADVVYtd 151 (232)
+++.+-=.||+.+- |+ +..+..||++ ++++.|+++ .+.++ +.|+.+++++|++||+++|||||||
T Consensus 187 ~glkva~vGD~~nva~Sl~~~l~~lG~~-v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd 265 (353)
T 3sds_A 187 EGLKIAWVGDANNVLFDLAIAATKMGVN-VAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTD 265 (353)
T ss_dssp TTCEEEEESCCCHHHHHHHHHHHHTTCE-EEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeC
Confidence 44455556776543 56 5556789997 999999765 23333 4588999999999999999999999
Q ss_pred cccccccCCCchHHHHhhcCCccCHHHHhh--cCCCcEEeCCCCCC-ccccccccCCCCchHHHHHhhCHHHHHHHHHHH
Q 026861 152 RIQRERFGERTDLYEEARGKYIVDQNVLQV--MEKHAVVLHPLPRL-DEITVDVDADPRAAYFRQAKNGLYIRMALLKLL 228 (232)
Q Consensus 152 rwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~--ak~daivMHpLPRg-~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~l 228 (232)
+|.+++.+.+..++.+++.+||||.++|+. +++|++|||||||. +||++||+++|+|+||+||+||+|+|||||.++
T Consensus 266 ~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcLP~~~~EI~~eV~d~p~S~if~QaeNrl~~rmAlL~~~ 345 (353)
T 3sds_A 266 TWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCLPRHPEEVSDEVFYSERSLVFPEAENRLWAAISALEAF 345 (353)
T ss_dssp CC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECSCCCTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCCCCCCCeECHHHhCCCcchHHHHHhhcHHHHHHHHHHH
Confidence 998766544334566778899999999999 89999999999964 899999999999999999999999999999998
Q ss_pred hc
Q 026861 229 LV 230 (232)
Q Consensus 229 Lg 230 (232)
+.
T Consensus 346 l~ 347 (353)
T 3sds_A 346 VV 347 (353)
T ss_dssp TT
T ss_pred HH
Confidence 73
No 27
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=99.97 E-value=5.5e-32 Score=248.14 Aligned_cols=143 Identities=17% Similarity=0.117 Sum_probs=113.3
Q ss_pred eeeccccccccCCcccHHH-HHHHhcCCcccccccchHhH--HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccC
Q 026861 83 VETQSTPSFTIGKKFQLDD-VIEAQQFDRDILNAIFEDDI--KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFG 159 (232)
Q Consensus 83 ~~~~~~~~~~~g~~~~~~~-li~A~~~~~~~l~v~~p~di--~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~ 159 (232)
+.|-=++....||..-+++ +..+..||++ ++++.|+++ .+... .++++++|++||+++||||||++||+++.+
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~-v~~~~P~~~~~~~~~~---~~~~~~~d~~eav~~aDvvy~~~w~s~g~~ 244 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYE-FVITHPEGYELDPKFV---GNARVEYDQMKAFEGADFIYAKNWAAYTGD 244 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSE-EEEECCTTCCCCHHHH---TTCEEESCHHHHHTTCSEEEECCCCCCSTT
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCE-EEEeCCcccCCChhhc---cceEEECCHHHHhCCCCEEEecCcccCCCc
Confidence 3343334445788777777 4444688886 999999877 12222 256689999999999999999999997653
Q ss_pred CCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCC--CCccccccccCCCCchHHHHHhhCHHHHHHHHHHHhcC
Q 026861 160 ERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLP--RLDEITVDVDADPRAAYFRQAKNGLYIRMALLKLLLVG 231 (232)
Q Consensus 160 ~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLP--Rg~EIt~eV~d~p~S~if~QAeNrl~vRmALL~~lLg~ 231 (232)
...+.+.+ ..+|+||.++|+.++ |++|||||| ||+||+++|+++|+|+||+||+||+|+|||||.+++++
T Consensus 245 ~~~~~~~r-~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~eV~d~p~S~vf~QaeNrl~~r~AlL~~ll~~ 316 (324)
T 1js1_X 245 NYGQILST-DRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLEN 316 (324)
T ss_dssp CTTCCCCC-CTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHH-hcCcccCHHHHHhcC-CcEEECCCCCCCCcccCHHHhCCCcchHHHHHhhCHHHHHHHHHHHHhc
Confidence 20011112 378999999999999 999999999 89999999999999999999999999999999999974
No 28
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=99.97 E-value=7.9e-32 Score=252.88 Aligned_cols=130 Identities=17% Similarity=0.234 Sum_probs=109.7
Q ss_pred HHHHH-HHhcCCcccccccchHhH------H----HHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCC------
Q 026861 99 LDDVI-EAQQFDRDILNAIFEDDI------K----DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGER------ 161 (232)
Q Consensus 99 ~~~li-~A~~~~~~~l~v~~p~di------~----e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~------ 161 (232)
+|+++ .+..||++ ++++.|+++ . +++++.|+++++++|++||+++|||||||+|.+||...+
T Consensus 211 a~Sli~~~~~lG~~-v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~aDvVytd~W~Smg~~~er~~~~~ 289 (399)
T 3q98_A 211 PQGIIGLMTRFGMD-VTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLR 289 (399)
T ss_dssp HHHHHHHHGGGTCE-EEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCE-EEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEecCccccchhhhhhhhcc
Confidence 47744 56789997 999999754 2 334578999999999999999999999999988763111
Q ss_pred -------------chHHHHhhcCCccCHHHHhhcC-CCcEEeCCCC--------CCccccccccCCCCchHHHHHhhCHH
Q 026861 162 -------------TDLYEEARGKYIVDQNVLQVME-KHAVVLHPLP--------RLDEITVDVDADPRAAYFRQAKNGLY 219 (232)
Q Consensus 162 -------------~~~~~~~~~~Y~Vt~elL~~ak-~daivMHpLP--------Rg~EIt~eV~d~p~S~if~QAeNrl~ 219 (232)
..++.+++.+||||.++|+.++ +|++|||||| ||.||++||+++|+|+||+|||||+|
T Consensus 290 ~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHcLPa~~~~~~~rg~EVt~eV~d~p~S~vf~QAeNrl~ 369 (399)
T 3q98_A 290 ANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPY 369 (399)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCCSSCCEETTTBSSCSEEHHHHHHHHHHHHHHHHTHHH
T ss_pred ccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECCCCCCCcccCCCCCEeChhhhCCccccHHHHHhccHH
Confidence 0123468899999999999997 5999999999 38999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 026861 220 IRMALLKLLL 229 (232)
Q Consensus 220 vRmALL~~lL 229 (232)
+|||||..+.
T Consensus 370 vrmAll~~~~ 379 (399)
T 3q98_A 370 IIAAMILSRK 379 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998775
No 29
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=99.96 E-value=1.9e-30 Score=244.82 Aligned_cols=136 Identities=15% Similarity=0.225 Sum_probs=111.5
Q ss_pred cCCcc-cHHHH-HHHhcCCcccccccchHhH------H----HHHHhCCCEEEEEcCHHHhhccCCEEEEcccccccc--
Q 026861 93 IGKKF-QLDDV-IEAQQFDRDILNAIFEDDI------K----DYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERF-- 158 (232)
Q Consensus 93 ~g~~~-~~~~l-i~A~~~~~~~l~v~~p~di------~----e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~-- 158 (232)
.|++- -++++ ..+..||++ |+++.|+++ . +++++.|+++++++|++||+++|||||||+|.+||.
T Consensus 201 ~Gd~nnVa~Sli~~l~~lG~~-v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~ADVVytd~W~sm~~Q~ 279 (418)
T 2yfk_A 201 YGKPLSVPQGIVGLMTRLGMD-VVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDADVVYPKSWAPFAAME 279 (418)
T ss_dssp SCCCSHHHHHHHHHHGGGTCE-EEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCSEEEECCCCCHHHHH
T ss_pred cCccchHHHHHHHHHHHcCCE-EEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEEccccchhHHH
Confidence 45552 44674 455789997 999999855 2 234568999999999999999999999999976543
Q ss_pred --------CCCc---------hHHHHhhcCCccCHHHHhhcCC-CcEEeCCCCC--------CccccccccCCCCchHHH
Q 026861 159 --------GERT---------DLYEEARGKYIVDQNVLQVMEK-HAVVLHPLPR--------LDEITVDVDADPRAAYFR 212 (232)
Q Consensus 159 --------~~~~---------~~~~~~~~~Y~Vt~elL~~ak~-daivMHpLPR--------g~EIt~eV~d~p~S~if~ 212 (232)
++.. .+..+++.+|+||.++|+.+++ |++||||||+ |.||++||+++|+|+||+
T Consensus 280 ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcLPa~r~~~~~rg~EIt~eV~d~p~S~vf~ 359 (418)
T 2yfk_A 280 KRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCLPADITGVSCEEGEVEASVFDRYRVELYK 359 (418)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCSCCCEETTTBSSCSEEHHHHHHHHHHHHH
T ss_pred HHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCCCCCCccCCCCCCEEChHHhCCCcchHHh
Confidence 1100 1224688999999999999986 9999999994 889999999999999999
Q ss_pred HHhhCHHHHHHHHHHHh
Q 026861 213 QAKNGLYIRMALLKLLL 229 (232)
Q Consensus 213 QAeNrl~vRmALL~~lL 229 (232)
||+||+|+|||||.++.
T Consensus 360 QAeNrl~~r~AlL~~~~ 376 (418)
T 2yfk_A 360 EASYKPYVIAAMIFLSK 376 (418)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHhh
Confidence 99999999999998875
No 30
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=94.46 E-value=0.12 Score=48.91 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=63.6
Q ss_pred eccccccccCCcccHH--------------HHHHHhcCCcccccccchH--hH----HHHHHhCCCEEEEE---------
Q 026861 85 TQSTPSFTIGKKFQLD--------------DVIEAQQFDRDILNAIFED--DI----KDYLTSQGVEWEES--------- 135 (232)
Q Consensus 85 ~~~~~~~~~g~~~~~~--------------~li~A~~~~~~~l~v~~p~--di----~e~l~~~G~~i~~~--------- 135 (232)
.-.+|+||++|...-+ -++.+......+.+|.+-+ .+ -..++..|.++.++
T Consensus 170 ~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~ 249 (436)
T 3h9u_A 170 KLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQ 249 (436)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCceEeechhhhhhhhhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHH
Confidence 3458899998874433 1444443334445555532 22 24445566655443
Q ss_pred --------cCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCCCCcccccc
Q 026861 136 --------ADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLPRLDEITVD 201 (232)
Q Consensus 136 --------~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLPRg~EIt~e 201 (232)
.+++|+++++|||+++. .....++.+.++.+|+++++....+-+.||+.+
T Consensus 250 A~~~G~~~~sL~eal~~ADVVilt~----------------gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~ 307 (436)
T 3h9u_A 250 AAMEGYQVLLVEDVVEEAHIFVTTT----------------GNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVA 307 (436)
T ss_dssp HHHTTCEECCHHHHTTTCSEEEECS----------------SCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHH
T ss_pred HHHhCCeecCHHHHHhhCCEEEECC----------------CCcCccCHHHHhhcCCCcEEEEeCCCCCccCHH
Confidence 36788999999999632 122447778888899999999998655566644
No 31
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=86.07 E-value=1.5 Score=41.85 Aligned_cols=94 Identities=18% Similarity=0.068 Sum_probs=57.5
Q ss_pred eccccccccCCcccHHH-HHHHhcCCcccccccchHhHHH-HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCc
Q 026861 85 TQSTPSFTIGKKFQLDD-VIEAQQFDRDILNAIFEDDIKD-YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERT 162 (232)
Q Consensus 85 ~~~~~~~~~g~~~~~~~-li~A~~~~~~~l~v~~p~di~e-~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~ 162 (232)
+.+..+.=.|-|.==.. ...++.||+. +.+.=+..... .+...|..+ .+++|+++++|+|++.. .
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~G~~-Viv~d~~~~~~~~a~~~g~~~---~~l~ell~~aDiVi~~~------~--- 321 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGLGAR-VYITEIDPICAIQAVMEGFNV---VTLDEIVDKGDFFITCT------G--- 321 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHHTCE-EEEECSCHHHHHHHHTTTCEE---CCHHHHTTTCSEEEECC------S---
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCcCE-EEEEeCChhhHHHHHHcCCEe---cCHHHHHhcCCEEEECC------C---
Confidence 33333333454433333 3334566764 55544443321 234567653 58999999999999984 1
Q ss_pred hHHHHhhcCCccCHHHHhhcCCCcEEeCCCCCCccc
Q 026861 163 DLYEEARGKYIVDQNVLQVMEKHAVVLHPLPRLDEI 198 (232)
Q Consensus 163 ~~~~~~~~~Y~Vt~elL~~ak~daivMHpLPRg~EI 198 (232)
....++.+.++.+|+++++.++...+.||
T Consensus 322 -------t~~lI~~~~l~~MK~gailiNvgrg~~EI 350 (479)
T 1v8b_A 322 -------NVDVIKLEHLLKMKNNAVVGNIGHFDDEI 350 (479)
T ss_dssp -------SSSSBCHHHHTTCCTTCEEEECSSTTTSB
T ss_pred -------hhhhcCHHHHhhcCCCcEEEEeCCCCccc
Confidence 12447888888899999999988755553
No 32
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=85.29 E-value=2.5 Score=40.44 Aligned_cols=75 Identities=15% Similarity=0.132 Sum_probs=49.9
Q ss_pred HHHhcCCcccccccchHhHHH-HHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhh
Q 026861 103 IEAQQFDRDILNAIFEDDIKD-YLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQV 181 (232)
Q Consensus 103 i~A~~~~~~~l~v~~p~di~e-~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ 181 (232)
..++.||+. +.+.=+..... .+...|..+ .+++|+++++|+|++.. + ....|+.+.++.
T Consensus 294 ~~l~~~G~~-V~v~d~~~~~~~~a~~~G~~~---~~l~ell~~aDiVi~~~------~----------t~~lI~~~~l~~ 353 (494)
T 3d64_A 294 QSLRGLGAT-VWVTEIDPICALQAAMEGYRV---VTMEYAADKADIFVTAT------G----------NYHVINHDHMKA 353 (494)
T ss_dssp HHHHTTTCE-EEEECSCHHHHHHHHTTTCEE---CCHHHHTTTCSEEEECS------S----------SSCSBCHHHHHH
T ss_pred HHHHHCCCE-EEEEeCChHhHHHHHHcCCEe---CCHHHHHhcCCEEEECC------C----------cccccCHHHHhh
Confidence 344567764 55544433221 223456653 47999999999999985 1 124478888899
Q ss_pred cCCCcEEeCCCCCCcc
Q 026861 182 MEKHAVVLHPLPRLDE 197 (232)
Q Consensus 182 ak~daivMHpLPRg~E 197 (232)
+|+++++..+..-+.|
T Consensus 354 MK~gAilINvgrg~ve 369 (494)
T 3d64_A 354 MRHNAIVCNIGHFDSE 369 (494)
T ss_dssp CCTTEEEEECSSSSCS
T ss_pred CCCCcEEEEcCCCcch
Confidence 9999999988775554
No 33
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=74.32 E-value=5.8 Score=33.72 Aligned_cols=88 Identities=13% Similarity=0.124 Sum_probs=55.8
Q ss_pred ccccccCCcccHHHHHHHhc--CCcccccccc-hHhH--HHHHHhCCCEEEEEc-----C-------HHHhhc--cCCEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQ--FDRDILNAIF-EDDI--KDYLTSQGVEWEESA-----D-------LMEVAS--KCDVV 148 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~--~~~~~l~v~~-p~di--~e~l~~~G~~i~~~~-----d-------leEAl~--~ADVV 148 (232)
+.+|=-|.|--+..|+.|.+ ++.+-+-|+. +++. ++.+++.|+.+...+ + +.+.++ ++|+|
T Consensus 8 iavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dli 87 (215)
T 3tqr_A 8 IVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKLI 87 (215)
T ss_dssp EEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEE
T ss_pred EEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhcCCCEE
Confidence 44566689988888888865 3455333333 2333 578889999875531 1 123333 37888
Q ss_pred EEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 149 YQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 149 Ytdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
..-.|- ..+.+++++..+..++-+||-
T Consensus 88 v~agy~-----------------~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 88 VLAGFM-----------------RKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp EESSCC-----------------SCCCHHHHHHTTTSEEEEESS
T ss_pred EEccch-----------------hhCCHHHHhhccCCeEEeCcc
Confidence 776652 346777777777778888884
No 34
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=70.39 E-value=11 Score=33.33 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=57.3
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc--hHhHHHHHHhCCCEEEEEcC-----------HHHhhc--cCCEEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF--EDDIKDYLTSQGVEWEESAD-----------LMEVAS--KCDVVY 149 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~--p~di~e~l~~~G~~i~~~~d-----------leEAl~--~ADVVY 149 (232)
+-+|=-|.|--+.+|+.+.+-| .+ +..++ .++..+.+++.|+.+..... +.+.++ ++|+|.
T Consensus 93 i~vl~Sg~g~~l~~ll~~~~~g~l~~~-i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv 171 (286)
T 3n0v_A 93 VVIMVSKADHCLNDLLYRQRIGQLGMD-VVAVVSNHPDLEPLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVI 171 (286)
T ss_dssp EEEEESSCCHHHHHHHHHHHTTSSCCE-EEEEEESSSTTHHHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHCCCCCcE-EEEEEeCcHHHHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5667778888888888875544 44 33333 35667788899998765321 122333 478887
Q ss_pred EccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCC--CC
Q 026861 150 QTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP--LP 193 (232)
Q Consensus 150 tdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHp--LP 193 (232)
.-+|- ..+.+++++..+..++=.|| ||
T Consensus 172 la~y~-----------------~il~~~~l~~~~~~~iNiHpSlLP 200 (286)
T 3n0v_A 172 LARYM-----------------QVLSPELCRRLDGWAINIHHSLLP 200 (286)
T ss_dssp ESSCC-----------------SCCCHHHHHHTTTSEEEEEECSST
T ss_pred ecccc-----------------cccCHHHHhhhcCCeEEecccccc
Confidence 76642 34677778777777888888 56
No 35
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=68.78 E-value=2.2 Score=38.46 Aligned_cols=49 Identities=24% Similarity=0.229 Sum_probs=33.5
Q ss_pred ccccccccCCcccHH------H---HHHHhcCCcccccccchHhHH---------HHHHhCCCEEEEE
Q 026861 86 QSTPSFTIGKKFQLD------D---VIEAQQFDRDILNAIFEDDIK---------DYLTSQGVEWEES 135 (232)
Q Consensus 86 ~~~~~~~~g~~~~~~------~---li~A~~~~~~~l~v~~p~di~---------e~l~~~G~~i~~~ 135 (232)
-++||||+|||-+.| | |.+... ++++++|++.+|.. ..+...|.++.+.
T Consensus 113 ~~vPVINagdg~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~ 179 (304)
T 3r7f_A 113 VNIPILNAGDGCGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFS 179 (304)
T ss_dssp CSSCEEESCCTTSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEeCCCCCCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEE
Confidence 358999999876665 4 455433 47889999998862 3344677776554
No 36
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=68.55 E-value=7.3 Score=34.84 Aligned_cols=88 Identities=16% Similarity=0.305 Sum_probs=56.3
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc--hHhHHHHHHhCCCEEEEEc----C-------HHHhhc--cCCEEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF--EDDIKDYLTSQGVEWEESA----D-------LMEVAS--KCDVVY 149 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~--p~di~e~l~~~G~~i~~~~----d-------leEAl~--~ADVVY 149 (232)
+-+|=-|.|--|.+|+.+.+-| .+ +..++ .++..+.+++.|+.+.... + +.+.++ ++|+|.
T Consensus 108 i~vl~Sg~g~nl~~ll~~~~~g~l~~~-I~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~DliV 186 (302)
T 3o1l_A 108 VVLMASRESHCLADLLHRWHSDELDCD-IACVISNHQDLRSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVVV 186 (302)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTCSCSE-EEEEEESSSTTHHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEEEEeCCchhHHHHHHHHHCCCCCcE-EEEEEECcHHHHHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 5566678887788888875433 44 33333 2566778889999876541 1 123333 478887
Q ss_pred EccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCC--CC
Q 026861 150 QTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP--LP 193 (232)
Q Consensus 150 tdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHp--LP 193 (232)
.-+|- ..+.+++++..+..++=.|| ||
T Consensus 187 lagym-----------------~IL~~~~l~~~~~~~INiHpSlLP 215 (302)
T 3o1l_A 187 LARYM-----------------QILPPQLCREYAHQVINIHHSFLP 215 (302)
T ss_dssp ESSCC-----------------SCCCTTHHHHTTTCEEEEESSCTT
T ss_pred HhHhh-----------------hhcCHHHHhhhhCCeEEeCccccc
Confidence 76652 23666677777777888888 56
No 37
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=66.03 E-value=10 Score=33.66 Aligned_cols=88 Identities=15% Similarity=0.248 Sum_probs=56.5
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc--hHhHHHHHHhCCCEEEEEc----C-------HHHhhc--cCCEEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF--EDDIKDYLTSQGVEWEESA----D-------LMEVAS--KCDVVY 149 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~--p~di~e~l~~~G~~i~~~~----d-------leEAl~--~ADVVY 149 (232)
+-+|--|.|--+.+|+.+.+-| .+ +..++ .++....+++.|+.+.... + +.+.++ ++|+|.
T Consensus 98 i~vl~Sg~g~~l~~ll~~~~~g~l~~~-i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv 176 (292)
T 3lou_A 98 VLIMVSKLEHCLADLLFRWKMGELKMD-IVGIVSNHPDFAPLAAQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVI 176 (292)
T ss_dssp EEEEECSCCHHHHHHHHHHHHTSSCCE-EEEEEESSSTTHHHHHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTCSEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHcCCCCcE-EEEEEeCcHHHHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 5667778887888888875433 44 33333 2456677889999876532 1 112333 478887
Q ss_pred EccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCC--CC
Q 026861 150 QTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP--LP 193 (232)
Q Consensus 150 tdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHp--LP 193 (232)
.-+|- ..+.+++++..+..++-.|| ||
T Consensus 177 la~y~-----------------~il~~~~l~~~~~~~iNiHpSlLP 205 (292)
T 3lou_A 177 LARYM-----------------QVLSPEASARLANRAINIHHSFLP 205 (292)
T ss_dssp ESSCC-----------------SCCCHHHHHHTTTSEEEEEEECSS
T ss_pred ecCch-----------------hhCCHHHHhhhcCCeEEeCCCcCc
Confidence 76642 34677777777777888888 56
No 38
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=65.81 E-value=12 Score=34.63 Aligned_cols=96 Identities=16% Similarity=0.249 Sum_probs=59.7
Q ss_pred eeccccccccCCcccHHH-HHHHhcCCcccccccchH-hHHHHHHhCCCEEEE-----------------------EcCH
Q 026861 84 ETQSTPSFTIGKKFQLDD-VIEAQQFDRDILNAIFED-DIKDYLTSQGVEWEE-----------------------SADL 138 (232)
Q Consensus 84 ~~~~~~~~~~g~~~~~~~-li~A~~~~~~~l~v~~p~-di~e~l~~~G~~i~~-----------------------~~dl 138 (232)
++.+..++=.|-|.--.. ...|..+|.+ +.+.=.. +-.+.+.+.|.++.. ..++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAK-TTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCE-EEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 445555555566644333 5556777875 5544332 224556677877532 1356
Q ss_pred HHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCC
Q 026861 139 MEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP 191 (232)
Q Consensus 139 eEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHp 191 (232)
+++++++|||++..-...+ ..+.-|++++++..++++++.-.
T Consensus 260 ~e~l~~aDIVI~tv~iPg~-----------~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGR-----------PAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHTTCSEEEECCCCTTS-----------CCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHhcCCEEEECCCCCCc-----------ccceeecHHHHhcCCCCcEEEEE
Confidence 7999999999987522111 13466899999999988877544
No 39
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=65.32 E-value=11 Score=35.10 Aligned_cols=45 Identities=24% Similarity=0.279 Sum_probs=32.7
Q ss_pred CHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 137 DLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 137 dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
+++++++++|||++......+ ..+.-|++++++..++++++.=.-
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~-----------~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGR-----------PAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSS-----------CCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHHHhcCCCEEEECCcCCCC-----------CCCEEecHHHHhcCCCCCEEEEEe
Confidence 568899999999987533211 134568999999999888876544
No 40
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=64.93 E-value=20 Score=30.29 Aligned_cols=88 Identities=14% Similarity=0.196 Sum_probs=55.8
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc-hHh--HHHHHHhCCCEEEEEc-----C-------HHHhhc--cCCE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF-EDD--IKDYLTSQGVEWEESA-----D-------LMEVAS--KCDV 147 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~-p~d--i~e~l~~~G~~i~~~~-----d-------leEAl~--~ADV 147 (232)
+.+|=-|.|--+..+++|.+-+ .+-+-|+. .++ ..+.+++.|+.+...+ + +.+.++ ++|+
T Consensus 10 i~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dl 89 (209)
T 4ds3_A 10 VVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALDVLKPDI 89 (209)
T ss_dssp EEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHHCCSE
T ss_pred EEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHhcCCCE
Confidence 4566678898888888886543 44233333 222 2578889999875532 1 112233 4788
Q ss_pred EEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 148 VYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 148 VYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
+..-.|- ..+.+++++..+..++-+||-
T Consensus 90 iv~agy~-----------------~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 90 ICLAGYM-----------------RLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp EEESSCC-----------------SCCCHHHHGGGTTCEEEEESS
T ss_pred EEEeccc-----------------cCcCHHHHhhccCCeEEECCc
Confidence 8776652 346777787777788889984
No 41
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=63.51 E-value=14 Score=31.24 Aligned_cols=88 Identities=15% Similarity=0.115 Sum_probs=56.2
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc-hHh--HHHHHHhCCCEEEEEc-------CHHHhhc--cCCEEEEcc
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF-EDD--IKDYLTSQGVEWEESA-------DLMEVAS--KCDVVYQTR 152 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~-p~d--i~e~l~~~G~~i~~~~-------dleEAl~--~ADVVYtdr 152 (232)
+.+|=-|.|--+..++.|.+-+ .+-+-|+. .++ ..+.+++.|+.+...+ .+.+.++ ++|+|..-.
T Consensus 11 i~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivlag 90 (215)
T 3kcq_A 11 VGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVCLAG 90 (215)
T ss_dssp EEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEEESS
T ss_pred EEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEEEeC
Confidence 4566678898888888886543 44233333 222 3578889999876532 1223333 478887776
Q ss_pred ccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 153 IQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 153 wq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
|- ..+.+++++..+..++-+||-
T Consensus 91 y~-----------------~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 91 FM-----------------SILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp CC-----------------SCCCHHHHHHTTTSEEEEESS
T ss_pred Cc-----------------eEeCHHHHhhccCCeEEECcc
Confidence 52 346777777777778888884
No 42
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=62.92 E-value=20 Score=32.31 Aligned_cols=47 Identities=11% Similarity=0.065 Sum_probs=32.1
Q ss_pred HHHhcCCcccccccchHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 103 IEAQQFDRDILNAIFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 103 i~A~~~~~~~l~v~~p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
..++.||++ +.+.-+..-.+.+...|+. ..++++|+++++|+|....
T Consensus 177 ~~l~~~G~~-V~~~d~~~~~~~~~~~g~~--~~~~l~ell~~aDiV~l~~ 223 (352)
T 3gg9_A 177 GYGRAFGMN-VLVWGRENSKERARADGFA--VAESKDALFEQSDVLSVHL 223 (352)
T ss_dssp HHHHHTTCE-EEEECSHHHHHHHHHTTCE--ECSSHHHHHHHCSEEEECC
T ss_pred HHHHhCCCE-EEEECCCCCHHHHHhcCce--EeCCHHHHHhhCCEEEEec
Confidence 344678875 5555454333445567875 5579999999999998765
No 43
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=61.53 E-value=28 Score=33.16 Aligned_cols=51 Identities=24% Similarity=0.201 Sum_probs=36.3
Q ss_pred CHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCCCCcccccccc
Q 026861 137 DLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLPRLDEITVDVD 203 (232)
Q Consensus 137 dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLPRg~EIt~eV~ 203 (232)
+++|+++++|||.+.. + ....++.+.++..|+++++.-..--+.||+.+-.
T Consensus 295 ~LeElL~~ADIVv~at----g------------t~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL 345 (464)
T 3n58_A 295 TLDDAASTADIVVTTT----G------------NKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAAL 345 (464)
T ss_dssp CHHHHGGGCSEEEECC----S------------SSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGG
T ss_pred cHHHHHhhCCEEEECC----C------------CccccCHHHHhcCCCCeEEEEcCCCCcccCHHHH
Confidence 5788899999998742 1 1245899999999999998766533345665444
No 44
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=60.84 E-value=2.8 Score=38.03 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=25.1
Q ss_pred cccccccCCcccHH------H---HHHHhcC------CcccccccchHhH
Q 026861 87 STPSFTIGKKFQLD------D---VIEAQQF------DRDILNAIFEDDI 121 (232)
Q Consensus 87 ~~~~~~~g~~~~~~------~---li~A~~~------~~~~l~v~~p~di 121 (232)
++||||+|++ +.| | |.+.... .+++++|++.+|.
T Consensus 122 ~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 122 SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 5899999999 777 4 4443221 3788999998886
No 45
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=57.53 E-value=25 Score=32.22 Aligned_cols=63 Identities=17% Similarity=0.261 Sum_probs=38.8
Q ss_pred ccccccCCcccHHHHHHHhcC-CcccccccchHhHHHHH----------------HhCCCEEEEEcCHHHhhccCCEEEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQF-DRDILNAIFEDDIKDYL----------------TSQGVEWEESADLMEVASKCDVVYQ 150 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~-~~~~l~v~~p~di~e~l----------------~~~G~~i~~~~dleEAl~~ADVVYt 150 (232)
=|+|..=|.|.+.++|+|..- +++.+-=.+-+.+.+.+ +..|++ +++|-.||+++||++++
T Consensus 70 ~~~~~v~d~fd~~~v~~ah~~g~pe~~mp~ir~~v~~~a~~~pkppk~~ih~~~vEdaGVk--VtsDD~EAvk~AEi~Il 147 (358)
T 2b0j_A 70 EPGLVVIDEFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKPPKACIHLVHPEDVGLK--VTSDDREAVEGADIVIT 147 (358)
T ss_dssp SSEEEECCCSCHHHHHHHHHTTCGGGTHHHHHHHHHHHHHTSCCTTTEEEESSCGGGGTCE--EESCHHHHHTTCSEEEE
T ss_pred CCCceeecccCHHHHHHHHhcCChHHhhHHHHHHHHHHHhhCCCCCccceeeccHHHcCcE--eecchHHHhcCCCEEEE
Confidence 345556678888899999875 34321111111222222 245766 67888899999999987
Q ss_pred cc
Q 026861 151 TR 152 (232)
Q Consensus 151 dr 152 (232)
=.
T Consensus 148 ft 149 (358)
T 2b0j_A 148 WL 149 (358)
T ss_dssp CC
T ss_pred ec
Confidence 44
No 46
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=56.74 E-value=48 Score=31.57 Aligned_cols=97 Identities=19% Similarity=0.193 Sum_probs=54.5
Q ss_pred cccccccCCcccHH----------H----HHHHhcCCcccccccch--HhH----HHHHHhCCCEEEEEc----------
Q 026861 87 STPSFTIGKKFQLD----------D----VIEAQQFDRDILNAIFE--DDI----KDYLTSQGVEWEESA---------- 136 (232)
Q Consensus 87 ~~~~~~~g~~~~~~----------~----li~A~~~~~~~l~v~~p--~di----~e~l~~~G~~i~~~~---------- 136 (232)
.+|+||++|...=+ + +..+..+.+.+-++++- +.+ -..++..|+++.+++
T Consensus 226 ~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa 305 (488)
T 3ond_A 226 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQAT 305 (488)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCceecccchhhhhHhhhhccccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 38999999943321 1 33333333444444443 222 345567788776553
Q ss_pred -------CHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCCCCcccc
Q 026861 137 -------DLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLPRLDEIT 199 (232)
Q Consensus 137 -------dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLPRg~EIt 199 (232)
++++++..+|+++... .....++.+.++.+++++++........|++
T Consensus 306 ~~g~dv~~lee~~~~aDvVi~at----------------G~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~ 359 (488)
T 3ond_A 306 MEGLQVLTLEDVVSEADIFVTTT----------------GNKDIIMLDHMKKMKNNAIVCNIGHFDNEID 359 (488)
T ss_dssp HTTCEECCGGGTTTTCSEEEECS----------------SCSCSBCHHHHTTSCTTEEEEESSSTTTTBT
T ss_pred HhCCccCCHHHHHHhcCEEEeCC----------------CChhhhhHHHHHhcCCCeEEEEcCCCCcccc
Confidence 2334445566555321 1234577888888899999987765333443
No 47
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=53.59 E-value=14 Score=34.76 Aligned_cols=24 Identities=21% Similarity=0.242 Sum_probs=20.8
Q ss_pred CCEEEEEcCHHHhhccCCEEEEcc
Q 026861 129 GVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 129 G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
..+++.+.|++||+++||+|+..-
T Consensus 60 ~~~I~~TtD~~eAl~dADfVI~ai 83 (450)
T 3fef_A 60 RWRYEAVSTLKKALSAADIVIISI 83 (450)
T ss_dssp CEEEEEESSHHHHHTTCSEEEECC
T ss_pred CCeEEEECCHHHHhcCCCEEEecc
Confidence 457889999999999999998765
No 48
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=53.28 E-value=9.8 Score=33.64 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=56.8
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc---hHhHHHHHHhCCCEEEEEc----C-------HHHhhc--cCCEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF---EDDIKDYLTSQGVEWEESA----D-------LMEVAS--KCDVV 148 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~---p~di~e~l~~~G~~i~~~~----d-------leEAl~--~ADVV 148 (232)
+-+|=-|.|--+.+|+.+.+-| .+ +.+++ |++..+.+++.|+.+.... + +.+.++ ++|+|
T Consensus 92 i~vl~Sg~g~nl~~ll~~~~~g~l~~~-i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dli 170 (288)
T 3obi_A 92 VMLLVSQSDHCLADILYRWRVGDLHMI-PTAIVSNHPRETFSGFDFGDIPFYHFPVNKDTRRQQEAAITALIAQTHTDLV 170 (288)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTSSCEE-EEEEEESSCGGGSCCTTTTTCCEEECCCCTTTHHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEEcCCCCCHHHHHHHHHCCCCCeE-EEEEEcCCChhHHHHHHHcCCCEEEeCCCcccHHHHHHHHHHHHHhcCCCEE
Confidence 6677778888888888886544 34 33333 3567677788998876532 1 112233 47887
Q ss_pred EEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCC--CC
Q 026861 149 YQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP--LP 193 (232)
Q Consensus 149 Ytdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHp--LP 193 (232)
..-+|- ..+.+++++..+..++=.|| ||
T Consensus 171 vlagy~-----------------~il~~~~l~~~~~~~iNiHpSlLP 200 (288)
T 3obi_A 171 VLARYM-----------------QILSDEMSARLAGRCINIHHSFLP 200 (288)
T ss_dssp EESSCC-----------------SCCCHHHHHHTTTSEEEEEEECSS
T ss_pred Ehhhhh-----------------hhCCHHHHhhhcCCeEEeCccccc
Confidence 776642 34677777777777888888 56
No 49
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=51.50 E-value=42 Score=28.34 Aligned_cols=88 Identities=14% Similarity=0.209 Sum_probs=55.1
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc---h-HhHHHHHHhCCCEEEEEcC------------HHHhhc--cCC
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF---E-DDIKDYLTSQGVEWEESAD------------LMEVAS--KCD 146 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~---p-~di~e~l~~~G~~i~~~~d------------leEAl~--~AD 146 (232)
+.+|--|.|--+..|+.|.+-| .+ +..++ | ..+++.+++.|+.+.+.+. +.+.++ +.|
T Consensus 5 iavl~Sg~Gsnl~ali~~~~~~~l~~e-I~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~D 83 (211)
T 3p9x_A 5 VAIFASGSGTNAEAIIQSQKAGQLPCE-VALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQID 83 (211)
T ss_dssp EEEECCTTCHHHHHHHHHHHTTCCSSE-EEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCC
T ss_pred EEEEEeCCchHHHHHHHHHHcCCCCcE-EEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhcCCC
Confidence 4456668888888888886544 33 33333 2 2346888999998754321 112232 478
Q ss_pred EEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCC
Q 026861 147 VVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLP 193 (232)
Q Consensus 147 VVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLP 193 (232)
+|..-.|- ..|.+++++..+..++-+||-.
T Consensus 84 liv~agy~-----------------~Il~~~~l~~~~~~~iNiHpSL 113 (211)
T 3p9x_A 84 FVVLAGYM-----------------RLVGPTLLGAYEGRIVNIHPSL 113 (211)
T ss_dssp EEEESSCC-----------------SCCCHHHHHHHTTSEEEEESSC
T ss_pred EEEEeCch-----------------hhcCHHHHhhccCCeEEECCcc
Confidence 88776642 3467777777777788888843
No 50
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=51.19 E-value=12 Score=35.25 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=21.0
Q ss_pred CCCEEEEEcCHHHhhccCCEEEEc
Q 026861 128 QGVEWEESADLMEVASKCDVVYQT 151 (232)
Q Consensus 128 ~G~~i~~~~dleEAl~~ADVVYtd 151 (232)
...+++.+.|.+||++|||+|+++
T Consensus 60 ~~~~i~~t~d~~eAl~gAD~Vi~~ 83 (477)
T 3u95_A 60 SPVKVVKTESLDEAIEGADFIINT 83 (477)
T ss_dssp CCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCeEEEEeCCHHHHhCCCCEEEEC
Confidence 346788899999999999999987
No 51
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=50.96 E-value=44 Score=29.75 Aligned_cols=56 Identities=11% Similarity=0.147 Sum_probs=36.1
Q ss_pred hHHHHHHhCCCEEEEEcCH-----HHhhc--cCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 120 DIKDYLTSQGVEWEESADL-----MEVAS--KCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 120 di~e~l~~~G~~i~~~~dl-----eEAl~--~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
.+++++.+.|+.+....++ .+.++ ++|+++.-.|- +.|.+++++..+-.++-+||-
T Consensus 54 ~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~y~-----------------~ilp~~~l~~~~~g~iNiHpS 116 (318)
T 3q0i_A 54 PVKTLALEHNVPVYQPENFKSDESKQQLAALNADLMVVVAYG-----------------LLLPKVVLDTPKLGCINVHGS 116 (318)
T ss_dssp HHHHHHHHTTCCEECCSCSCSHHHHHHHHTTCCSEEEESSCC-----------------SCCCHHHHTSSTTCEEEEESS
T ss_pred HHHHHHHHcCCCEEccCcCCCHHHHHHHHhcCCCEEEEeCcc-----------------ccCCHHHHhhCcCCEEEeCCc
Confidence 4568888999987443332 22332 47887766542 446777777766678888883
No 52
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=50.44 E-value=1.1e+02 Score=28.85 Aligned_cols=51 Identities=25% Similarity=0.277 Sum_probs=34.7
Q ss_pred cCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCCCCccccccc
Q 026861 136 ADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLPRLDEITVDV 202 (232)
Q Consensus 136 ~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLPRg~EIt~eV 202 (232)
.+++|+++++|||++. . + ..-.++.+.++..++++++.-..=-+.||+.+.
T Consensus 267 ~~Leeal~~ADIVi~a---t-g------------t~~lI~~e~l~~MK~gailINvgrg~~EId~~~ 317 (435)
T 3gvp_A 267 VKLNEVIRQVDIVITC---T-G------------NKNVVTREHLDRMKNSCIVCNMGHSNTEIDVAS 317 (435)
T ss_dssp CCHHHHTTTCSEEEEC---S-S------------CSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGG
T ss_pred ccHHHHHhcCCEEEEC---C-C------------CcccCCHHHHHhcCCCcEEEEecCCCccCCHHH
Confidence 3578899999999984 1 1 123478888888899988876643334555443
No 53
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=48.48 E-value=19 Score=27.02 Aligned_cols=59 Identities=10% Similarity=0.152 Sum_probs=37.8
Q ss_pred cCCcccHHHHHHH-hcCCcccccccc--hHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 93 IGKKFQLDDVIEA-QQFDRDILNAIF--EDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 93 ~g~~~~~~~li~A-~~~~~~~l~v~~--p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.|-|.--..+..+ ...|.+ +.+.- ++...+++++.|..+...++++++++++|+|+..+
T Consensus 27 iG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 27 VGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp ECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECS
T ss_pred ECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeC
Confidence 3555444432222 234655 55543 33344556677888778889999999999999876
No 54
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=48.23 E-value=33 Score=30.89 Aligned_cols=48 Identities=21% Similarity=0.189 Sum_probs=30.1
Q ss_pred HHHhcCCcccccccchHh-HHHHHHhCCCEEEEEcCHHHhhccCCEEEEccc
Q 026861 103 IEAQQFDRDILNAIFEDD-IKDYLTSQGVEWEESADLMEVASKCDVVYQTRI 153 (232)
Q Consensus 103 i~A~~~~~~~l~v~~p~d-i~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrw 153 (232)
..++.||+. +.+.-+.. -.+.+...|+. ..++++|.++++|||....-
T Consensus 181 ~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~--~~~~l~ell~~aDvV~l~~P 229 (351)
T 3jtm_A 181 QRLKPFGCN-LLYHDRLQMAPELEKETGAK--FVEDLNEMLPKCDVIVINMP 229 (351)
T ss_dssp HHHGGGCCE-EEEECSSCCCHHHHHHHCCE--ECSCHHHHGGGCSEEEECSC
T ss_pred HHHHHCCCE-EEEeCCCccCHHHHHhCCCe--EcCCHHHHHhcCCEEEECCC
Confidence 445677775 44433321 12334455765 45789999999999987653
No 55
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=48.16 E-value=8.5 Score=34.05 Aligned_cols=88 Identities=10% Similarity=0.204 Sum_probs=54.5
Q ss_pred ccccccCCcccHHHHHHHhcCC---cccccccc--hHh-HHHHHHhCCCEEEEEc-C----------HHHhhc--cCCEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQFD---RDILNAIF--EDD-IKDYLTSQGVEWEESA-D----------LMEVAS--KCDVV 148 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~~---~~~l~v~~--p~d-i~e~l~~~G~~i~~~~-d----------leEAl~--~ADVV 148 (232)
+-+|=-|.|--+.+|+.+.+-| .+ +..++ .++ +.+.+++.|+.+.... . +.+.++ ++|+|
T Consensus 91 i~vl~Sg~g~nl~~ll~~~~~g~l~~~-i~~Visn~~~a~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dli 169 (287)
T 3nrb_A 91 VVIMVSKFDHCLGDLLYRHRLGELDME-VVGIISNHPREALSVSLVGDIPFHYLPVTPATKAAQESQIKNIVTQSQADLI 169 (287)
T ss_dssp EEEEECSCCHHHHHHHHHHHHTSSCCE-EEEEEESSCGGGCCCCCCTTSCEEECCCCGGGHHHHHHHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCcCHHHHHHHHHCCCCCeE-EEEEEeCChHHHHHHHHHcCCCEEEEeccCcchhhHHHHHHHHHHHhCCCEE
Confidence 5667778888888888875433 33 33333 244 5566778888865532 1 112232 37777
Q ss_pred EEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCC--CC
Q 026861 149 YQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHP--LP 193 (232)
Q Consensus 149 Ytdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHp--LP 193 (232)
..-+|- ..+++++++..+..++=.|| ||
T Consensus 170 vlagym-----------------~il~~~~l~~~~~~~iNiHpSlLP 199 (287)
T 3nrb_A 170 VLARYM-----------------QILSDDLSAFLSGRCINIHHSFLP 199 (287)
T ss_dssp EESSCC-----------------SCCCHHHHHHHTTSEEEEESSCTT
T ss_pred Ehhhhh-----------------hhcCHHHHhhccCCeEEECccccc
Confidence 766542 34777778777777888888 56
No 56
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=48.14 E-value=31 Score=31.38 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=27.3
Q ss_pred HHhcCCcccccccchHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 104 EAQQFDRDILNAIFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 104 ~A~~~~~~~l~v~~p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.++.||+. +.+.=|..-.+.+...|+. ..+++|.++++|||..-.
T Consensus 194 ~l~~fG~~-V~~~d~~~~~~~~~~~g~~---~~~l~ell~~aDvV~l~~ 238 (365)
T 4hy3_A 194 VLSGFRAR-IRVFDPWLPRSMLEENGVE---PASLEDVLTKSDFIFVVA 238 (365)
T ss_dssp HHTTSCCE-EEEECSSSCHHHHHHTTCE---ECCHHHHHHSCSEEEECS
T ss_pred hhhhCCCE-EEEECCCCCHHHHhhcCee---eCCHHHHHhcCCEEEEcC
Confidence 34566664 4443332112334456765 358999999999998754
No 57
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=46.65 E-value=71 Score=26.64 Aligned_cols=89 Identities=13% Similarity=0.108 Sum_probs=54.6
Q ss_pred ccccccCCcccHHHHHHHhcC---Ccccccccch-H--hHHHHHHhCCCEEEEEc--C----------HHHhhc--cCCE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQF---DRDILNAIFE-D--DIKDYLTSQGVEWEESA--D----------LMEVAS--KCDV 147 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~---~~~~l~v~~p-~--di~e~l~~~G~~i~~~~--d----------leEAl~--~ADV 147 (232)
+-+|-.|.|-.+..|+.|.+- +.+-+-|+.. + ..++++++.|+.+...+ + +.+.++ +.|+
T Consensus 3 i~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dl 82 (212)
T 1jkx_A 3 IVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDV 82 (212)
T ss_dssp EEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCCSE
T ss_pred EEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHhcCCCE
Confidence 345667888777778887443 3442333333 2 23688899999976532 1 112333 4788
Q ss_pred EEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCCC
Q 026861 148 VYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPLP 193 (232)
Q Consensus 148 VYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpLP 193 (232)
|..-.|- ..+.+++++..+..++-+||-.
T Consensus 83 iv~agy~-----------------~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 83 VVLAGFM-----------------RILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp EEESSCC-----------------SCCCHHHHHHTTTSEEEEESSC
T ss_pred EEEeChh-----------------hhCCHHHHhhccCCEEEEccCc
Confidence 7766542 3467777777777788888744
No 58
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=46.04 E-value=12 Score=33.96 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=24.6
Q ss_pred cccccccCCcccHH------H---HHHHhcCCcccccccchHhH
Q 026861 87 STPSFTIGKKFQLD------D---VIEAQQFDRDILNAIFEDDI 121 (232)
Q Consensus 87 ~~~~~~~g~~~~~~------~---li~A~~~~~~~l~v~~p~di 121 (232)
++||||+|++ +.| | |.+... .+++++|++.+|.
T Consensus 135 ~vPVINa~~~-~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~ 176 (325)
T 1vlv_A 135 GVPVYNGLTD-EFHPTQALADLMTIEENFG-RLKGVKVVFMGDT 176 (325)
T ss_dssp CSCEEESCCS-SCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCT
T ss_pred CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC
Confidence 5999999998 766 4 455332 3578999999884
No 59
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=43.98 E-value=53 Score=29.26 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=18.6
Q ss_pred HHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 125 LTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 125 l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
+...|+.. .+++|+++++|+|..-.
T Consensus 203 ~~~~g~~~---~~l~ell~~aDvV~l~~ 227 (335)
T 2g76_A 203 SASFGVQQ---LPLEEIWPLCDFITVHT 227 (335)
T ss_dssp HHHTTCEE---CCHHHHGGGCSEEEECC
T ss_pred hhhcCcee---CCHHHHHhcCCEEEEec
Confidence 44566642 47899999999998765
No 60
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=41.69 E-value=51 Score=29.46 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=40.7
Q ss_pred cccccCCcccHHHHHHHh--cCCcccccccch--HhHHHHHHhC----CCEEEEEcCHHHhhccCCEEEEccc
Q 026861 89 PSFTIGKKFQLDDVIEAQ--QFDRDILNAIFE--DDIKDYLTSQ----GVEWEESADLMEVASKCDVVYQTRI 153 (232)
Q Consensus 89 ~~~~~g~~~~~~~li~A~--~~~~~~l~v~~p--~di~e~l~~~----G~~i~~~~dleEAl~~ADVVYtdrw 153 (232)
.+.=.|-|.+...++.+. ..+...+.|.-. +...++++.. |..+...++++++++++|||++.+-
T Consensus 131 ~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTp 203 (350)
T 1x7d_A 131 KMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA 203 (350)
T ss_dssp EEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred eEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEecc
Confidence 344457777776544432 234444555443 3333344332 7777788999999999999998764
No 61
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=41.52 E-value=74 Score=27.14 Aligned_cols=85 Identities=15% Similarity=0.108 Sum_probs=49.3
Q ss_pred ccccCCcccHHH-HHHHhcCCcccccccchHhH-HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHH
Q 026861 90 SFTIGKKFQLDD-VIEAQQFDRDILNAIFEDDI-KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEE 167 (232)
Q Consensus 90 ~~~~g~~~~~~~-li~A~~~~~~~l~v~~p~di-~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~ 167 (232)
+.=.|-|.--.. ...+..||.+ +.+.-+..- .+.+.+.|..+....++++.++++|+|+...=.
T Consensus 160 v~IiG~G~iG~~~a~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~------------- 225 (300)
T 2rir_A 160 VAVLGLGRTGMTIARTFAALGAN-VKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS------------- 225 (300)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-------------
T ss_pred EEEEcccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-------------
Confidence 333344443333 3344567764 555444222 223445677643346788999999999887521
Q ss_pred hhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 168 ARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 168 ~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
..++.+.++..++++++.-..
T Consensus 226 ----~~i~~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 226 ----MILNQTVLSSMTPKTLILDLA 246 (300)
T ss_dssp ----CCBCHHHHTTSCTTCEEEECS
T ss_pred ----hhhCHHHHHhCCCCCEEEEEe
Confidence 224566677778888776654
No 62
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=39.58 E-value=92 Score=25.89 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=53.9
Q ss_pred ccccccCCcccHHHHHHHhcC---Ccccccccc-hHh--HHHHHHhCCCEEEEEc-----C-------HHHhhc--cCCE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQF---DRDILNAIF-EDD--IKDYLTSQGVEWEESA-----D-------LMEVAS--KCDV 147 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~~---~~~~l~v~~-p~d--i~e~l~~~G~~i~~~~-----d-------leEAl~--~ADV 147 (232)
+.+|--|.|-.|..|+.+.+- +.+-+-|+. |++ .++.+++.|+.+...+ + +.+.++ +.|+
T Consensus 3 iaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dl 82 (209)
T 1meo_A 3 VAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDI 82 (209)
T ss_dssp EEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCCCE
Confidence 446667999888888887432 344222222 222 3577889999875322 1 122333 4788
Q ss_pred EEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 148 VYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 148 VYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
|..-.|- ..+.+++++..+..++-+||-
T Consensus 83 iv~a~y~-----------------~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 83 VCLAGFM-----------------RILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp EEEESCC-----------------SCCCHHHHHHTTTSEEEEESS
T ss_pred EEEcchh-----------------hhCCHHHHhhhcCCEEEEccC
Confidence 8776542 346777777777678888884
No 63
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=39.03 E-value=90 Score=26.53 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=41.4
Q ss_pred HhcCCcccccccchHhH-HHHHHhCCCEEEEEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcC
Q 026861 105 AQQFDRDILNAIFEDDI-KDYLTSQGVEWEESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVME 183 (232)
Q Consensus 105 A~~~~~~~l~v~~p~di-~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak 183 (232)
++.||++ +.+.-+..- .+.+.+.|..+....++++.++++|+|+...=. ..++.+.++..+
T Consensus 174 l~~~G~~-V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----------------~~i~~~~l~~mk 235 (293)
T 3d4o_A 174 FAALGAK-VKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----------------LVVTANVLAEMP 235 (293)
T ss_dssp HHHTTCE-EEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----------------CCBCHHHHHHSC
T ss_pred HHhCCCE-EEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----------------HHhCHHHHHhcC
Confidence 3455653 444333221 233445676643335778888999999876510 234666777778
Q ss_pred CCcEEeCCC
Q 026861 184 KHAVVLHPL 192 (232)
Q Consensus 184 ~daivMHpL 192 (232)
+++++....
T Consensus 236 ~~~~lin~a 244 (293)
T 3d4o_A 236 SHTFVIDLA 244 (293)
T ss_dssp TTCEEEECS
T ss_pred CCCEEEEec
Confidence 888877664
No 64
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=38.71 E-value=52 Score=28.70 Aligned_cols=44 Identities=14% Similarity=0.061 Sum_probs=27.2
Q ss_pred HhcCCcccccccchHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 105 AQQFDRDILNAIFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 105 A~~~~~~~l~v~~p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
++.||+. +.+.-+..-.+.+.+.|+.. .+++|+++++|+|..-.
T Consensus 161 l~~~G~~-V~~~d~~~~~~~~~~~g~~~---~~l~ell~~aDvV~l~~ 204 (307)
T 1wwk_A 161 ANALGMN-ILLYDPYPNEERAKEVNGKF---VDLETLLKESDVVTIHV 204 (307)
T ss_dssp HHHTTCE-EEEECSSCCHHHHHHTTCEE---CCHHHHHHHCSEEEECC
T ss_pred HHHCCCE-EEEECCCCChhhHhhcCccc---cCHHHHHhhCCEEEEec
Confidence 3456664 44433321123445667653 37899999999998765
No 65
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=38.46 E-value=16 Score=33.63 Aligned_cols=34 Identities=9% Similarity=0.007 Sum_probs=23.7
Q ss_pred ccccccccCCcccHH----H---HHHHhcCC---ccccc--ccchHhH
Q 026861 86 QSTPSFTIGKKFQLD----D---VIEAQQFD---RDILN--AIFEDDI 121 (232)
Q Consensus 86 ~~~~~~~~g~~~~~~----~---li~A~~~~---~~~l~--v~~p~di 121 (232)
-++||||+|++.|-- | |.+. || +++++ |++.+|+
T Consensus 156 ~~vPVINag~g~HPtQaLaDl~TI~E~--~g~~~l~glkvvva~vGDl 201 (359)
T 1zq6_A 156 SPVPVINMETITHPCQELAHALALQEH--FGTPDLRGKKYVLTWTYHP 201 (359)
T ss_dssp CSSCEEESSSSCCHHHHHHHHHHHHHH--HTSSCCTTCEEEEEECCCS
T ss_pred CCCCEEeCCCCCCcHHHHHHHHHHHHH--hCCCcccCCeeEEEEEecc
Confidence 358999999999321 4 4443 44 57888 8888874
No 66
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=36.69 E-value=26 Score=30.86 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=39.7
Q ss_pred ccccCCcccHHHHHHHh--cCCcccccccchH---hHHHHHH-hCCCEEEEEcCHHHhhccCCEEEEccc
Q 026861 90 SFTIGKKFQLDDVIEAQ--QFDRDILNAIFED---DIKDYLT-SQGVEWEESADLMEVASKCDVVYQTRI 153 (232)
Q Consensus 90 ~~~~g~~~~~~~li~A~--~~~~~~l~v~~p~---di~e~l~-~~G~~i~~~~dleEAl~~ADVVYtdrw 153 (232)
+.=.|-|.+...++.|. .++...+.+.-.. .+.+.+. ..|..++.. |++|++++||||++-+-
T Consensus 124 v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~ 192 (313)
T 3hdj_A 124 LGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMA-APADIAAQADIVVTATR 192 (313)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCC
T ss_pred EEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccC
Confidence 34457787777644442 2344445554442 3322222 358887777 99999999999998874
No 67
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=35.14 E-value=49 Score=29.72 Aligned_cols=47 Identities=17% Similarity=0.148 Sum_probs=29.3
Q ss_pred EEcCHHHhhccCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 134 ESADLMEVASKCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 134 ~~~dleEAl~~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
..++++|.++++|||..-.--... ....++.+.++.+|+++++.-..
T Consensus 217 ~~~~l~ell~~sDvV~l~~Plt~~------------T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 217 YHDTLDSLLGASDIFLIAAPGRPE------------LKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp ECSSHHHHHHTCSEEEECSCCCGG------------GTTCBCHHHHHHSCTTEEEEECS
T ss_pred EeCCHHHHHhhCCEEEEecCCCHH------------HHHHhCHHHHhhCCCCcEEEECC
Confidence 346899999999999876532211 11235666666666666665553
No 68
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=35.04 E-value=28 Score=30.67 Aligned_cols=55 Identities=16% Similarity=0.271 Sum_probs=36.9
Q ss_pred HHHHHHhCCCEEEEEcCH-----HHhhc--cCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 121 IKDYLTSQGVEWEESADL-----MEVAS--KCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 121 i~e~l~~~G~~i~~~~dl-----eEAl~--~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
+++.+.+.|+.+...++. .+.++ ++|+++.-.| ...+.+++++..+-.++-+||-
T Consensus 45 v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~y-----------------~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 45 VARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYY-----------------RHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEEEEESC-----------------CSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHcCCCEECCCcCCcHHHHHHHHhcCCCEEEEecc-----------------ccccCHHHHhcCcCCEEEecCC
Confidence 678888999987655443 12332 4788776553 2347778887777778888984
No 69
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=34.84 E-value=34 Score=30.65 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=17.4
Q ss_pred hCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 127 SQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 127 ~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
..|+. ...+++|.++++|||..-.
T Consensus 208 ~~g~~--~~~~l~ell~~aDvV~l~~ 231 (347)
T 1mx3_A 208 ALGLQ--RVSTLQDLLFHSDCVTLHC 231 (347)
T ss_dssp HHTCE--ECSSHHHHHHHCSEEEECC
T ss_pred hcCCe--ecCCHHHHHhcCCEEEEcC
Confidence 34543 3457899999999998754
No 70
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=31.96 E-value=1.3e+02 Score=28.35 Aligned_cols=47 Identities=13% Similarity=0.091 Sum_probs=31.8
Q ss_pred HHHHhcCCcccccccchHhHH-HHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 102 VIEAQQFDRDILNAIFEDDIK-DYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di~-e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
...++.+|.. +.++-+...+ +.+.+.|..+ .+++++++++|+|+...
T Consensus 290 A~~lka~Ga~-Viv~d~~~~~~~~A~~~Ga~~---~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 290 AEAMKGQGAR-VSVTEIDPINALQAMMEGFDV---VTVEEAIGDADIVVTAT 337 (494)
T ss_dssp HHHHHHTTCE-EEEECSCHHHHHHHHHTTCEE---CCHHHHGGGCSEEEECS
T ss_pred HHHHHHCCCE-EEEEeCCHHHHHHHHHcCCEE---ecHHHHHhCCCEEEECC
Confidence 4555677874 5555444332 4566788763 57889999999999874
No 71
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=31.72 E-value=40 Score=31.37 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=18.1
Q ss_pred EcCHHHhhccCCEEEEccccc
Q 026861 135 SADLMEVASKCDVVYQTRIQR 155 (232)
Q Consensus 135 ~~dleEAl~~ADVVYtdrwq~ 155 (232)
.+|++|++++||+|+..|+..
T Consensus 386 ~~~~~~~~~~aD~iv~~~~~~ 406 (432)
T 3pid_A 386 VRDLNAFKQEADVIISNRMAE 406 (432)
T ss_dssp CCCHHHHHHHCSEEECSSCCG
T ss_pred ECCHHHHHhcCCEEEECCCCh
Confidence 578999999999999999754
No 72
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=31.69 E-value=76 Score=27.69 Aligned_cols=25 Identities=16% Similarity=0.112 Sum_probs=18.8
Q ss_pred HHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 125 LTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 125 l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
+.+.|..+ .+++|.++++|+|....
T Consensus 180 ~~~~g~~~---~~l~ell~~aDvVvl~~ 204 (313)
T 2ekl_A 180 AEKINAKA---VSLEELLKNSDVISLHV 204 (313)
T ss_dssp HHHTTCEE---CCHHHHHHHCSEEEECC
T ss_pred HHhcCcee---cCHHHHHhhCCEEEEec
Confidence 44566653 47899999999998765
No 73
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=31.52 E-value=66 Score=28.19 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=28.8
Q ss_pred HHhcCCcccccccch-HhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 104 EAQQFDRDILNAIFE-DDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 104 ~A~~~~~~~l~v~~p-~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.+..||+. +.+.=+ ..-.+.+.+.|+. ..++++|+++++|+|..-.
T Consensus 164 ~l~~~G~~-V~~~d~~~~~~~~~~~~g~~--~~~~l~ell~~aDvVil~~ 210 (320)
T 1gdh_A 164 RAQGFDMD-IDYFDTHRASSSDEASYQAT--FHDSLDSLLSVSQFFSLNA 210 (320)
T ss_dssp HHHTTTCE-EEEECSSCCCHHHHHHHTCE--ECSSHHHHHHHCSEEEECC
T ss_pred HHHHCCCE-EEEECCCCcChhhhhhcCcE--EcCCHHHHHhhCCEEEEec
Confidence 34567775 554434 2112234456775 3458999999999998765
No 74
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=31.27 E-value=61 Score=28.50 Aligned_cols=24 Identities=17% Similarity=0.084 Sum_probs=20.7
Q ss_pred CCEEEEEcCHHHhhccCCEEEEcc
Q 026861 129 GVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 129 G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
..+++.+.|+++++++||+|+...
T Consensus 63 ~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 63 NVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEeCCHHHHhCCCCEEEEcc
Confidence 457778899999999999999876
No 75
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=30.62 E-value=22 Score=32.44 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=31.7
Q ss_pred ccccccccCCcccHH------H---HHHHhcC-CcccccccchHhHH--------HHHHhCCCEEEEE
Q 026861 86 QSTPSFTIGKKFQLD------D---VIEAQQF-DRDILNAIFEDDIK--------DYLTSQGVEWEES 135 (232)
Q Consensus 86 ~~~~~~~~g~~~~~~------~---li~A~~~-~~~~l~v~~p~di~--------e~l~~~G~~i~~~ 135 (232)
-++|||| |++-+.| | |.+-... .+++++|++.+|++ ..+...|.++.+.
T Consensus 146 s~vPVIN-G~g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~ 212 (358)
T 4h31_A 146 AGVPVWN-GLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLV 212 (358)
T ss_dssp SSSCEEE-SCCSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCceEC-CCCcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEe
Confidence 4589999 9998887 5 3342222 37789999998862 2334556665443
No 76
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=30.35 E-value=49 Score=31.44 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=37.1
Q ss_pred HHHHHHhCCCEEEEEcCHH-----Hhhc--cCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 121 IKDYLTSQGVEWEESADLM-----EVAS--KCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 121 i~e~l~~~G~~i~~~~dle-----EAl~--~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
+++.+++.|+.+...++.. +.++ ++|+|+.-.|- ..|.+++++..+-.++-+||-
T Consensus 45 ~~~~a~~~~ip~~~~~~~~~~~~~~~l~~~~~d~iv~~~~~-----------------~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 45 VARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYR-----------------HLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHHTCCEECCSCTTSHHHHHHHHHHCCSEEEEESCC-----------------SCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHcCCCEeccCCCCcHHHHHHHHhcCCCEEEEcCcc-----------------cccCHHHHhcCCCCeEEecCC
Confidence 6788888998876554432 2333 47888766542 347777887777778889984
No 77
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=29.99 E-value=76 Score=29.88 Aligned_cols=25 Identities=16% Similarity=0.275 Sum_probs=18.5
Q ss_pred HHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 125 LTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 125 l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
+.+.|+.. .+++|+++++|+|..-.
T Consensus 180 a~~~g~~~---~~l~e~~~~aDvV~l~~ 204 (529)
T 1ygy_A 180 AAQLGIEL---LSLDDLLARADFISVHL 204 (529)
T ss_dssp HHHHTCEE---CCHHHHHHHCSEEEECC
T ss_pred HHhcCcEE---cCHHHHHhcCCEEEECC
Confidence 44556653 27889999999998765
No 78
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=29.70 E-value=1.4e+02 Score=25.12 Aligned_cols=87 Identities=13% Similarity=0.158 Sum_probs=54.3
Q ss_pred ccccccCCcccHHHHHHHhc--CCcccccccc-hH-hHHHHHHhCCCEEEEEcCH-------------HHhhc--cCCEE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQ--FDRDILNAIF-ED-DIKDYLTSQGVEWEESADL-------------MEVAS--KCDVV 148 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~--~~~~~l~v~~-p~-di~e~l~~~G~~i~~~~dl-------------eEAl~--~ADVV 148 (232)
+-+|=-|.|-.+..|+.|.. ++.+-+-|+. |+ ..++.+++.|+.+... +. .+.++ ++|++
T Consensus 15 i~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~-~~~~~~~r~~~d~~~~~~l~~~~~Dli 93 (215)
T 3da8_A 15 LVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTV-RLADHPSRDAWDVAITAATAAHEPDLV 93 (215)
T ss_dssp EEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCCEEEC-CGGGSSSHHHHHHHHHHHHHTTCCSEE
T ss_pred EEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHcCCCEEEe-CcccccchhhhhHHHHHHHHhhCCCEE
Confidence 44555588888888888764 3344233333 22 3467888999987655 32 12232 47887
Q ss_pred EEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 149 YQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 149 Ytdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
..-.|- ..+.+++++..+..++-+||-
T Consensus 94 vlagy~-----------------~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 94 VSAGFM-----------------RILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp EEEECC-----------------SCCCHHHHHHHTTTEEEEESS
T ss_pred EEcCch-----------------hhCCHHHHhhccCCeEEeCcc
Confidence 776542 346777777777778888884
No 79
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=29.28 E-value=32 Score=31.27 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=24.2
Q ss_pred ccccccccCCcccHH------H---HHHHhcC--C--cccccccchHhH
Q 026861 86 QSTPSFTIGKKFQLD------D---VIEAQQF--D--RDILNAIFEDDI 121 (232)
Q Consensus 86 ~~~~~~~~g~~~~~~------~---li~A~~~--~--~~~l~v~~p~di 121 (232)
-++||||+|+ -+.| | |.+ .| | +++++|++.+|.
T Consensus 139 ~~vPVINag~-~~~HPtQaLaDl~Ti~e--~~~~G~~l~glkva~vGD~ 184 (339)
T 4a8t_A 139 ATIPVINGMS-DYNHPTQELGDLCTMVE--HLPEGKKLEDCKVVFVGDA 184 (339)
T ss_dssp CSSCEEECCC-SSCCHHHHHHHHHHHHH--TCCTTCCGGGCEEEEESSC
T ss_pred CCCCEEECCC-CCcCcHHHHHHHHHHHH--HhhcCCCCCCCEEEEECCC
Confidence 3589999997 3555 4 344 45 4 889999998875
No 80
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=28.94 E-value=97 Score=27.16 Aligned_cols=43 Identities=12% Similarity=0.121 Sum_probs=26.3
Q ss_pred hcCCcccccccchHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 106 QQFDRDILNAIFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 106 ~~~~~~~l~v~~p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
+.||++ +.+.-+..-.+.+...|..+ .+++++++++|+|..-.
T Consensus 170 ~~~G~~-V~~~d~~~~~~~~~~~g~~~---~~l~~~l~~aDvVil~v 212 (334)
T 2dbq_A 170 KGFNMR-ILYYSRTRKEEVERELNAEF---KPLEDLLRESDFVVLAV 212 (334)
T ss_dssp HHTTCE-EEEECSSCCHHHHHHHCCEE---CCHHHHHHHCSEEEECC
T ss_pred HhCCCE-EEEECCCcchhhHhhcCccc---CCHHHHHhhCCEEEECC
Confidence 456764 44433321113344557653 58999999999998765
No 81
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=28.81 E-value=1.2e+02 Score=26.98 Aligned_cols=58 Identities=9% Similarity=0.091 Sum_probs=36.8
Q ss_pred HhHHHHHHhCCCEEEEEcCH----------HHhhc--cCCEEEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCc
Q 026861 119 DDIKDYLTSQGVEWEESADL----------MEVAS--KCDVVYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHA 186 (232)
Q Consensus 119 ~di~e~l~~~G~~i~~~~dl----------eEAl~--~ADVVYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~da 186 (232)
..+.+++.+.|+.+...++. .+.++ ++|+++.-.| ...|.+++++..+-.+
T Consensus 62 ~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~l~~~~~Dliv~a~y-----------------~~ilp~~il~~~~~g~ 124 (329)
T 2bw0_A 62 DPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALGAELNVLPFC-----------------SQFIPMEIISAPRHGS 124 (329)
T ss_dssp CHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHHTTCCSEEEESSC-----------------SSCCCHHHHTCSTTCE
T ss_pred CHHHHHHHHcCCCEEecCcccccccccHHHHHHHHhcCCCEEEEeeh-----------------hhhCCHHHHhhCcCCE
Confidence 45678888999987554332 12222 3677766543 1347777777777778
Q ss_pred EEeCCCC
Q 026861 187 VVLHPLP 193 (232)
Q Consensus 187 ivMHpLP 193 (232)
+-+||-.
T Consensus 125 iNiHpSL 131 (329)
T 2bw0_A 125 IIYHPSL 131 (329)
T ss_dssp EEEESSC
T ss_pred EEEcCCc
Confidence 8888754
No 82
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=28.61 E-value=51 Score=29.19 Aligned_cols=45 Identities=11% Similarity=0.049 Sum_probs=26.7
Q ss_pred HHhcCCcccccccchHh-HHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 104 EAQQFDRDILNAIFEDD-IKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 104 ~A~~~~~~~l~v~~p~d-i~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.++.||++ +.+.=+.. -.+.+...|.. ..+++|+++++|||....
T Consensus 163 ~l~~~G~~-V~~~d~~~~~~~~~~~~g~~---~~~l~ell~~aDvV~l~~ 208 (330)
T 4e5n_A 163 RLQGWGAT-LQYHEAKALDTQTEQRLGLR---QVACSELFASSDFILLAL 208 (330)
T ss_dssp HTTTSCCE-EEEECSSCCCHHHHHHHTEE---ECCHHHHHHHCSEEEECC
T ss_pred HHHHCCCE-EEEECCCCCcHhHHHhcCce---eCCHHHHHhhCCEEEEcC
Confidence 34566765 44433321 12233345654 248999999999998765
No 83
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=28.09 E-value=34 Score=31.35 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=24.0
Q ss_pred ccccccccCCcccHH------HHHHH-hcC--C--cccccccchHhH
Q 026861 86 QSTPSFTIGKKFQLD------DVIEA-QQF--D--RDILNAIFEDDI 121 (232)
Q Consensus 86 ~~~~~~~~g~~~~~~------~li~A-~~~--~--~~~l~v~~p~di 121 (232)
-++||||+|+ -+.| |+..- ..| | +++++|++.+|.
T Consensus 117 ~~vPVINag~-~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~ 162 (355)
T 4a8p_A 117 ATIPVINGMS-DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA 162 (355)
T ss_dssp CSSCEEECCC-SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCC
T ss_pred CCCCEEeCCC-CCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC
Confidence 3589999997 3545 42221 245 4 789999999875
No 84
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=27.66 E-value=1.1e+02 Score=26.61 Aligned_cols=64 Identities=25% Similarity=0.236 Sum_probs=38.0
Q ss_pred ccccccCCcccHHHHHHHh--cCCcccccccc--hHhHHHHHH---hCCCEEEEEcCHHHhhccCCEEEEccc
Q 026861 88 TPSFTIGKKFQLDDVIEAQ--QFDRDILNAIF--EDDIKDYLT---SQGVEWEESADLMEVASKCDVVYQTRI 153 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~--~~~~~~l~v~~--p~di~e~l~---~~G~~i~~~~dleEAl~~ADVVYtdrw 153 (232)
..+.=.|-|.+...+..+. ..+...+.|.- ++...++++ ..|..+. .+|+++++ ++|||++.+-
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp 196 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTP 196 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeC
Confidence 3444457787776544432 23444455443 233333333 2335566 88999999 9999998875
No 85
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=26.89 E-value=97 Score=28.35 Aligned_cols=25 Identities=20% Similarity=0.177 Sum_probs=18.3
Q ss_pred HhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 126 TSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 126 ~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
...|+. ...+++|.++++|||..-.
T Consensus 231 ~~~G~~--~~~~l~ell~~aDvV~l~~ 255 (393)
T 2nac_A 231 KELNLT--WHATREDMYPVCDVVTLNC 255 (393)
T ss_dssp HHHTCE--ECSSHHHHGGGCSEEEECS
T ss_pred hhcCce--ecCCHHHHHhcCCEEEEec
Confidence 345654 3467899999999998765
No 86
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=26.50 E-value=39 Score=30.82 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=22.5
Q ss_pred ccccccccCC-cccHH----H---HHHHhcCCc--------------ccccccchHhH
Q 026861 86 QSTPSFTIGK-KFQLD----D---VIEAQQFDR--------------DILNAIFEDDI 121 (232)
Q Consensus 86 ~~~~~~~~g~-~~~~~----~---li~A~~~~~--------------~~l~v~~p~di 121 (232)
-++||||+|+ +.|-- | |.+ .||. ++++|++.+|+
T Consensus 142 s~vPVINag~d~~HPtQaLaDl~TI~E--~~G~~~~~~~~~~~~~~l~glkva~vGD~ 197 (353)
T 3sds_A 142 SSVPVINALCDTFHPLQAIADFLTIHE--SFASQSATHGTHPSSLGLEGLKIAWVGDA 197 (353)
T ss_dssp CSSCEEEEECSSCCHHHHHHHHHHHHH--HTC--------CTTCCSCTTCEEEEESCC
T ss_pred CCCCEEECCCCCCCcHHHHHHHHHHHH--HhCCCcccccccccccccCCCEEEEECCC
Confidence 3589999984 44431 4 444 3453 78999998886
No 87
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=25.46 E-value=27 Score=32.07 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=22.9
Q ss_pred cccccccCCcccHH------H---HHHHhcCCcccccccchHhH
Q 026861 87 STPSFTIGKKFQLD------D---VIEAQQFDRDILNAIFEDDI 121 (232)
Q Consensus 87 ~~~~~~~g~~~~~~------~---li~A~~~~~~~l~v~~p~di 121 (232)
++||||+| +-+.| | |.+... .+++++|++.+|.
T Consensus 148 ~vPVINa~-~~~~HPtQaLaDl~Ti~E~~G-~l~glkva~vGD~ 189 (365)
T 4amu_A 148 GVPVWNGL-TDDEHPTQIIADFMTMKEKFG-NLKNKKIVFIGDY 189 (365)
T ss_dssp CSCEEEEE-CSSCCHHHHHHHHHHHHHHHS-SCTTCEEEEESST
T ss_pred CCCEEeCC-CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC
Confidence 58999996 34444 3 455333 3688999999887
No 88
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=24.21 E-value=1.4e+02 Score=26.58 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=0.0
Q ss_pred HHHHhcCCcccccccchHhH-HHHHHhCCCEEEEEcC---------------------------HHHhhccCCEEEEccc
Q 026861 102 VIEAQQFDRDILNAIFEDDI-KDYLTSQGVEWEESAD---------------------------LMEVASKCDVVYQTRI 153 (232)
Q Consensus 102 li~A~~~~~~~l~v~~p~di-~e~l~~~G~~i~~~~d---------------------------leEAl~~ADVVYtdrw 153 (232)
+..|+.+|.. +.+.=.... .+.+++.|.++...+. +++.++++|||+...-
T Consensus 188 a~~a~~~Ga~-V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~ 266 (384)
T 1l7d_A 188 IATAKRLGAV-VMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTAL 266 (384)
T ss_dssp HHHHHHTTCE-EEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCc
Q ss_pred cccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEe
Q 026861 154 QRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVL 189 (232)
Q Consensus 154 q~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivM 189 (232)
......... ++.+.++.++++.++.
T Consensus 267 ~pg~~~~~l-----------i~~~~l~~mk~g~viv 291 (384)
T 1l7d_A 267 IPGKPAPVL-----------ITEEMVTKMKPGSVII 291 (384)
T ss_dssp CTTSCCCCC-----------SCHHHHTTSCTTCEEE
T ss_pred cCCCCCCee-----------eCHHHHhcCCCCCEEE
No 89
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=23.60 E-value=1.5e+02 Score=26.69 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=53.4
Q ss_pred eccccccccCCcccHHH-HHHHhcCCcccccccchH-hHHHHHHhCCCEEEEEc-------------------------C
Q 026861 85 TQSTPSFTIGKKFQLDD-VIEAQQFDRDILNAIFED-DIKDYLTSQGVEWEESA-------------------------D 137 (232)
Q Consensus 85 ~~~~~~~~~g~~~~~~~-li~A~~~~~~~l~v~~p~-di~e~l~~~G~~i~~~~-------------------------d 137 (232)
+.+..++=.|-|---.. +..|..+|.. +.+.=+. +..+.+++.|.++...+ +
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAI-VRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 33444444455443332 4556677874 5444332 22345667788753211 3
Q ss_pred HHHhhccCCEEEEcc-ccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 138 LMEVASKCDVVYQTR-IQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 138 leEAl~~ADVVYtdr-wq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
+++.++++|||+... |.. . ..+.-++.+.++.++++.++.-..
T Consensus 249 l~e~~~~aDvVI~~~~~pg-~-----------~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPG-K-----------PAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHCSEEEECCCCTT-S-----------CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHhCCCCEEEECCccCC-C-----------CCCeeeCHHHHhcCCCCcEEEEEc
Confidence 678888999999875 321 1 022446778888888777665443
No 90
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=23.22 E-value=50 Score=30.41 Aligned_cols=23 Identities=9% Similarity=-0.130 Sum_probs=20.0
Q ss_pred CEEEEEcCHHHhhccCCEEEEcc
Q 026861 130 VEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 130 ~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.+++.+.|.+++++|||+|+.+-
T Consensus 59 ~~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 59 FKVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp SEEEECSSHHHHHTTCSEEEECC
T ss_pred eEEEEeCCHHHHhCCCCEEEEcC
Confidence 77777789999999999998775
No 91
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=23.09 E-value=92 Score=28.93 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=19.8
Q ss_pred CEEEEEcCHHHhhccCCEEEEcc
Q 026861 130 VEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 130 ~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.+++.++|+++++++||+|+.-.
T Consensus 95 ~~l~~ttd~~ea~~~aDvViiaV 117 (432)
T 3pid_A 95 LNFRATTDKHDAYRNADYVIIAT 117 (432)
T ss_dssp CCEEEESCHHHHHTTCSEEEECC
T ss_pred CCeEEEcCHHHHHhCCCEEEEeC
Confidence 46778999999999999998765
No 92
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=22.95 E-value=71 Score=27.62 Aligned_cols=61 Identities=15% Similarity=0.200 Sum_probs=37.1
Q ss_pred cCCcccHHHHHHH--hcCCcccccccc--hHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEccc
Q 026861 93 IGKKFQLDDVIEA--QQFDRDILNAIF--EDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTRI 153 (232)
Q Consensus 93 ~g~~~~~~~li~A--~~~~~~~l~v~~--p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdrw 153 (232)
.|-|.....+..+ ..+|++.+.+.- ++...++++..|.+++..++++|+++++|+|++..-
T Consensus 141 IG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp 205 (312)
T 2i99_A 141 LGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTL 205 (312)
T ss_dssp ECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCC
T ss_pred ECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeC
Confidence 4767666544332 223554455543 333344555556334467899999999999998764
No 93
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=22.80 E-value=94 Score=27.53 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=50.3
Q ss_pred cccccccccccc--------ceeeccccccccCCccc-----H--------HHHHHHhcCCcccccccchH--hH-----
Q 026861 70 QQLPLRNSIQCW--------AVETQSTPSFTIGKKFQ-----L--------DDVIEAQQFDRDILNAIFED--DI----- 121 (232)
Q Consensus 70 ~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~-----~--------~~li~A~~~~~~~l~v~~p~--di----- 121 (232)
-+|||-.-+... .-.+|.++.+|.|.=+. + -.+++....+..+-++++-+ .+
T Consensus 98 vqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~ 177 (285)
T 3l07_A 98 VQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPV 177 (285)
T ss_dssp ECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHH
T ss_pred EcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHH
Confidence 567775333222 34677778777663111 0 12444333344454555432 22
Q ss_pred HHHHHhCCCEEEEEc----CHHHhhccCCEEEEcc
Q 026861 122 KDYLTSQGVEWEESA----DLMEVASKCDVVYQTR 152 (232)
Q Consensus 122 ~e~l~~~G~~i~~~~----dleEAl~~ADVVYtdr 152 (232)
-..+...|+++++++ ++++++++||+|++..
T Consensus 178 A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Av 212 (285)
T 3l07_A 178 SQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAV 212 (285)
T ss_dssp HHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECC
T ss_pred HHHHHHCCCeEEEEeCCchhHHHhcccCCEEEECC
Confidence 245667899998876 7899999999999887
No 94
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=22.44 E-value=69 Score=29.79 Aligned_cols=24 Identities=17% Similarity=0.062 Sum_probs=20.2
Q ss_pred CCEEEEEcCHHHhhccCCEEEEcc
Q 026861 129 GVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 129 G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
..+++.+.|.++|++|||+|+...
T Consensus 68 ~~~i~~t~D~~eal~gAD~VVita 91 (450)
T 1s6y_A 68 PIEIHLTLDRRRALDGADFVTTQF 91 (450)
T ss_dssp CCEEEEESCHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCHHHHhCCCCEEEEcC
Confidence 457777899999999999998765
No 95
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=22.43 E-value=1.2e+02 Score=27.23 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=19.9
Q ss_pred HHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 124 YLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 124 ~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.+.+.|+. ...+++|.++++|||....
T Consensus 203 ~~~~~g~~--~~~~l~ell~~aDvV~l~~ 229 (364)
T 2j6i_A 203 AEEKVGAR--RVENIEELVAQADIVTVNA 229 (364)
T ss_dssp HHHHTTEE--ECSSHHHHHHTCSEEEECC
T ss_pred HHHhcCcE--ecCCHHHHHhcCCEEEECC
Confidence 34456654 4468999999999998765
No 96
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=21.96 E-value=1.1e+02 Score=25.31 Aligned_cols=30 Identities=20% Similarity=0.291 Sum_probs=23.4
Q ss_pred HHHHhCCCEEEEE---cCHHHhhccCCEEEEcc
Q 026861 123 DYLTSQGVEWEES---ADLMEVASKCDVVYQTR 152 (232)
Q Consensus 123 e~l~~~G~~i~~~---~dleEAl~~ADVVYtdr 152 (232)
+.+++.|.++... +|+.+.+.+||.||...
T Consensus 55 ~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpG 87 (229)
T 1fy2_A 55 EVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGG 87 (229)
T ss_dssp HHHGGGTCEEEETTSSSCHHHHHHHCSEEEECC
T ss_pred HHHHHCCCEEEEEeccccHHHHHhcCCEEEECC
Confidence 4456778887776 66778999999999986
No 97
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=21.66 E-value=1.2e+02 Score=26.77 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=26.1
Q ss_pred HhcCCcccccccchHhHHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 105 AQQFDRDILNAIFEDDIKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 105 A~~~~~~~l~v~~p~di~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
++.||++ +.+.-+..-.+.+...|.. . .+++++++++|+|..-.
T Consensus 165 l~~~G~~-V~~~d~~~~~~~~~~~g~~--~-~~l~e~l~~aDiVil~v 208 (333)
T 2d0i_A 165 LIPFGVK-LYYWSRHRKVNVEKELKAR--Y-MDIDELLEKSDIVILAL 208 (333)
T ss_dssp HGGGTCE-EEEECSSCCHHHHHHHTEE--E-CCHHHHHHHCSEEEECC
T ss_pred HHHCCCE-EEEECCCcchhhhhhcCce--e-cCHHHHHhhCCEEEEcC
Confidence 4566764 4433322112334455654 2 48999999999998765
No 98
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=21.57 E-value=3e+02 Score=22.60 Aligned_cols=88 Identities=11% Similarity=0.196 Sum_probs=51.8
Q ss_pred ccccccCCcccHHHHHHHhc---CCcccccccch-H--hHHHHHHhCCCEEEEEcC------------HHHhhc--cCCE
Q 026861 88 TPSFTIGKKFQLDDVIEAQQ---FDRDILNAIFE-D--DIKDYLTSQGVEWEESAD------------LMEVAS--KCDV 147 (232)
Q Consensus 88 ~~~~~~g~~~~~~~li~A~~---~~~~~l~v~~p-~--di~e~l~~~G~~i~~~~d------------leEAl~--~ADV 147 (232)
+.+|=.|.|--+..++.+.. ++.+-+-|+.. + ..++.+++.|+.+...+. +.+.++ +.|+
T Consensus 6 i~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl 85 (212)
T 3av3_A 6 LAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQIDW 85 (212)
T ss_dssp EEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCCE
Confidence 44555677766666666533 23442233332 2 346788999999754221 112232 4677
Q ss_pred EEEccccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 148 VYQTRIQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 148 VYtdrwq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
+..-.|- ..+.+++++..+..++-.||-
T Consensus 86 iv~a~y~-----------------~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 86 IALAGYM-----------------RLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp EEESSCC-----------------SCCCHHHHHHTTTCEEEEESS
T ss_pred EEEchhh-----------------hhCCHHHHhhhcCCEEEEecC
Confidence 7766542 347777888777778888984
No 99
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=21.38 E-value=84 Score=28.68 Aligned_cols=48 Identities=15% Similarity=0.272 Sum_probs=30.5
Q ss_pred cCHHHhhccCCEEEEcc-ccccccCCCchHHHHhhcCCccCHHHHhhcCCCcEEeCCC
Q 026861 136 ADLMEVASKCDVVYQTR-IQRERFGERTDLYEEARGKYIVDQNVLQVMEKHAVVLHPL 192 (232)
Q Consensus 136 ~dleEAl~~ADVVYtdr-wq~Er~~~~~~~~~~~~~~Y~Vt~elL~~ak~daivMHpL 192 (232)
.+++|.++++|||..-. ...++ ++.....++.+.++.+++++++..+.
T Consensus 159 ~~l~ell~~aDvV~l~~Plt~~g---------~~~T~~li~~~~l~~mk~gailIN~s 207 (380)
T 2o4c_A 159 VSLERLLAEADVISLHTPLNRDG---------EHPTRHLLDEPRLAALRPGTWLVNAS 207 (380)
T ss_dssp CCHHHHHHHCSEEEECCCCCSSS---------SSCCTTSBCHHHHHTSCTTEEEEECS
T ss_pred CCHHHHHHhCCEEEEeccCcccc---------ccchhhhcCHHHHhhCCCCcEEEECC
Confidence 46788899999998764 32221 11223446677777777777777664
No 100
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=20.82 E-value=1.4e+02 Score=26.39 Aligned_cols=43 Identities=19% Similarity=0.090 Sum_probs=26.9
Q ss_pred cCCcccccccchHh-HHHHHHhCCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 107 QFDRDILNAIFEDD-IKDYLTSQGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 107 ~~~~~~l~v~~p~d-i~e~l~~~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
.||++ +.+.=+.. -.+.+.+.|.. ..++++++++++|+|..-.
T Consensus 185 ~~G~~-V~~~d~~~~~~~~~~~~g~~--~~~~l~ell~~aDvVil~v 228 (348)
T 2w2k_A 185 GLGMK-LVYYDVAPADAETEKALGAE--RVDSLEELARRSDCVSVSV 228 (348)
T ss_dssp TTCCE-EEEECSSCCCHHHHHHHTCE--ECSSHHHHHHHCSEEEECC
T ss_pred hcCCE-EEEECCCCcchhhHhhcCcE--EeCCHHHHhccCCEEEEeC
Confidence 67775 44433321 12233455766 3468999999999998765
No 101
>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima}
Probab=20.78 E-value=56 Score=27.40 Aligned_cols=55 Identities=13% Similarity=0.189 Sum_probs=38.3
Q ss_pred cHHHH-HHHhcCCcccccccchHhHH-HHHH--------hCCC-----------EEEEEcCHHHhhccCC-------EEE
Q 026861 98 QLDDV-IEAQQFDRDILNAIFEDDIK-DYLT--------SQGV-----------EWEESADLMEVASKCD-------VVY 149 (232)
Q Consensus 98 ~~~~l-i~A~~~~~~~l~v~~p~di~-e~l~--------~~G~-----------~i~~~~dleEAl~~AD-------VVY 149 (232)
-+||+ ..++-||+..|.++-|.... +.+. ..|. .+.+.++++||+++++ .|+
T Consensus 30 dihdiARamkt~Gl~~l~LV~P~~~~~~~a~~~~~~w~~~~Ga~~np~r~d~L~~a~vv~sL~eAl~~~~~~~g~~p~vv 109 (192)
T 3dcm_X 30 DVHDIARTARTYNLKGYYIVTNLRAQQDMVSKMLKFWREGFGSRYNPSRAESLKLVKLKSYLEDVLEDIESVEGERPLIF 109 (192)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCHHHHHHHHHHHHHHHTSGGGGTCSSSHHHHTTEEEESSHHHHHHHHHHHHSSCCEEE
T ss_pred cHHHHHHHHHhcCCceEEEECCccccHHHHHHHHHhhhcccCcccCcCHHHHhccCeEECCHHHHHHHHHhhcCCccEEE
Confidence 45664 55588999999999996542 1121 1232 4578999999999999 666
Q ss_pred Ecc
Q 026861 150 QTR 152 (232)
Q Consensus 150 tdr 152 (232)
.++
T Consensus 110 aTs 112 (192)
T 3dcm_X 110 FTS 112 (192)
T ss_dssp ECC
T ss_pred EeC
Confidence 664
No 102
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=20.68 E-value=1.1e+02 Score=27.01 Aligned_cols=83 Identities=18% Similarity=0.209 Sum_probs=50.6
Q ss_pred cccccccccccc--------ceeeccccccccCCccc-----H--------HHHHHHhcCCcccccccchH--hH-----
Q 026861 70 QQLPLRNSIQCW--------AVETQSTPSFTIGKKFQ-----L--------DDVIEAQQFDRDILNAIFED--DI----- 121 (232)
Q Consensus 70 ~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~-----~--------~~li~A~~~~~~~l~v~~p~--di----- 121 (232)
-+|||-.-+..+ .-.+|.++.+|.|.=+. + -.+++....+..+-++++-+ .+
T Consensus 97 vqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g~~~g~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~ 176 (285)
T 3p2o_A 97 VQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPM 176 (285)
T ss_dssp ECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHH
T ss_pred ecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHH
Confidence 567775433221 34677788777663111 1 13444444445555555543 22
Q ss_pred HHHHHhCCCEEEEEc----CHHHhhccCCEEEEcc
Q 026861 122 KDYLTSQGVEWEESA----DLMEVASKCDVVYQTR 152 (232)
Q Consensus 122 ~e~l~~~G~~i~~~~----dleEAl~~ADVVYtdr 152 (232)
-..+...|+++++++ ++++.+++||+|++..
T Consensus 177 A~lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Av 211 (285)
T 3p2o_A 177 ATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAA 211 (285)
T ss_dssp HHHHHHTTCEEEEECTTCSCHHHHHTTCSEEEECS
T ss_pred HHHHHHCCCeEEEEeCCchhHHHHhhcCCEEEECC
Confidence 245667899998874 7899999999999887
No 103
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=20.67 E-value=1.2e+02 Score=26.46 Aligned_cols=23 Identities=13% Similarity=0.094 Sum_probs=18.7
Q ss_pred CCEEEEEcCHHHhhccCCEEEEcc
Q 026861 129 GVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 129 G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
..+++.++| .+++++||+|+...
T Consensus 55 ~~~i~~t~d-~~a~~~aDiVViaa 77 (294)
T 1oju_A 55 YPKIVGGAD-YSLLKGSEIIVVTA 77 (294)
T ss_dssp CCEEEEESC-GGGGTTCSEEEECC
T ss_pred CCEEEEeCC-HHHhCCCCEEEECC
Confidence 457777778 89999999988764
No 104
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=20.28 E-value=73 Score=29.88 Aligned_cols=25 Identities=20% Similarity=0.284 Sum_probs=20.9
Q ss_pred CCCEEEEEcCHHHhhccCCEEEEcc
Q 026861 128 QGVEWEESADLMEVASKCDVVYQTR 152 (232)
Q Consensus 128 ~G~~i~~~~dleEAl~~ADVVYtdr 152 (232)
...++..+.|+++|+++||+|+...
T Consensus 86 ~~~~I~~t~D~~eal~~AD~VViaa 110 (472)
T 1u8x_X 86 PDIEFAATTDPEEAFTDVDFVMAHI 110 (472)
T ss_dssp TTSEEEEESCHHHHHSSCSEEEECC
T ss_pred CCCEEEEECCHHHHHcCCCEEEEcC
Confidence 3567888899999999999998765
Done!