BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026862
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 164/236 (69%), Gaps = 21/236 (8%)
Query: 1 MALSSSSSSLCLHSATVLS-GSQFSTPQLLFPPRVSFSYFPTKLNNNYQNNRNLSSSEYY 59
MAL S CL + ++S + F+ L F+ PTKL + + +R
Sbjct: 1 MALPS-----CLKTGALMSPATGFNFSGSLMKSDSGFAV-PTKLQSTRKGDRE------- 47
Query: 60 HSSASQKWRASVSFFPAFLNKGKDA---KVLKEELLEAIAPLDRGAEATPEDQQRVEQIA 116
+ +A SF PAFL + A K LK+ELLEAI PL+RGA A+P+DQ R++Q+A
Sbjct: 48 ----RLRVQAIFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLA 103
Query: 117 RKLEGVNPTKEPLKSDLLNGKWELIYTTSQSILQTQRPRFLRSVRNYQAINVDTLRAQNM 176
RK+E VNPTKEPLKSDL+NGKWELIYTTS SILQ ++PRFLRS+ NYQ+INVDTL+ QNM
Sbjct: 104 RKVEAVNPTKEPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNM 163
Query: 177 ESGPFFNQVTADLTPLNSRKVAVQFDYFKIGGLIPVKAPNTARGELETTYLDEDLR 232
E+ PF+N VT D+ PLNS+KVAV+ FKI G IP+KAP++ARGELE TY+DE+LR
Sbjct: 164 ETWPFYNSVTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELR 219
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
Query: 70 SVSFFPAFLNKGKDAKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPL 129
+V FP + K LK EL+EAI PL+RGA A+P+DQ ++Q+ARK+E VNPTKEPL
Sbjct: 48 AVFSFPPRNGGAEKRKQLKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPL 107
Query: 130 KSDLLNGKWELIYTTSQSILQTQRPRFLRSVRNYQAINVDTLRAQNMESGPFFNQVTADL 189
KSDL+NGKWELIYTTS +ILQ ++PRFLRS+ NYQ IN+DTL+ Q ME+ PF+N VT DL
Sbjct: 108 KSDLINGKWELIYTTSAAILQAKKPRFLRSLTNYQCINMDTLKVQRMETWPFYNSVTGDL 167
Query: 190 TPLNSRKVAVQFDYFKIGGLIPVKAPN-TARGELETTYLDEDLR 232
TPLNS+ VAV+ FKI G IPVKAP+ TARGELE TY+DE+LR
Sbjct: 168 TPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELR 211
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQ-RVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
+KEEL EA+ ++RG D++ +E + + LE NPT EP D + G W+LIY+T
Sbjct: 86 IKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYST 145
Query: 145 SQSILQTQRPRFLRSVRNYQAINVDTLRAQNMESGPFFNQVTADLTPLN----------- 193
++L ++R + +R++ ++ D L+ ++ G + + D+ LN
Sbjct: 146 I-TVLGSKRTKL--GLRDFVSLG-DLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVAS 201
Query: 194 ---SRKVAVQFDYFKIGGLIPVKAPNTAR-------------GELETTYLDEDLR 232
S K +V+ Y + + P + N R G E +YLDEDL+
Sbjct: 202 FKISSKSSVEITY-ESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDEDLQ 255
>sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic
OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 239
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSDLLNGKWELIYTTS- 145
L LL +A D G +PE + V Q+A +L+ KEP+K+ L+ G WE++Y +
Sbjct: 68 LISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYC-VKEPVKNPLIFGDWEVVYCSRP 126
Query: 146 -------QSILQTQRPRFLRSVRNYQAINV-DTLRAQ-NMESGPFFN---QVTADLTPLN 193
+S++ F ++ QAI+ D +R + ++ + F + +T L L+
Sbjct: 127 TSPGGGYRSVIGRL---FFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALD 183
Query: 194 SRKVAVQFD--YFKIGGLIPVKAPNTARGELETTYLDEDLR 232
S V V F+ K+G L K + +L TY+DE LR
Sbjct: 184 SEWVQVIFEPPEIKVGSL-EFKYGFESEVKLRITYVDEKLR 223
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK +L EA+ +RG A+ E + V ++ +LE NPT P ++ LLNGKW L YT+
Sbjct: 95 LKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSF 154
Query: 146 QSIL----QTQRPRFLRSVRNYQAINVDTLRAQNME--SGPFFN---QVTADLTPLNSRK 196
+ P+ ++ Q I+ + QN SGP A + ++
Sbjct: 155 SQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKR 214
Query: 197 VAVQFDYFKIG 207
V ++FD IG
Sbjct: 215 VQIKFDEGIIG 225
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Query: 90 ELLEAIAPL-DRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSDLLNGKWELIYTTSQSI 148
+L++A+ + RG A+P+ VE + LEG+ + P SDL+ G+W L++TT
Sbjct: 77 KLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDSDLIEGRWRLMFTT---- 132
Query: 149 LQTQRPRFLRSV-RNYQAINVDT------LRAQN-------MESGPFFNQ--VTADLTPL 192
RP + R + ++V T L+A N ++ F + V A +
Sbjct: 133 ----RPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGELKVEAVASIK 188
Query: 193 NSRKVAVQFDYFKIG-GLIPVKAP---------NTARGELETTYL 227
+ ++V +FD +P K P + A+G L+TTYL
Sbjct: 189 DGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYL 233
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 82 KDAKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWEL 140
++ +VLK L++++ DRG A+ E + + + +LE NPT P + LLNGKW L
Sbjct: 90 EETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWIL 149
Query: 141 IYTT 144
YT+
Sbjct: 150 AYTS 153
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
LK+ L+++ DRG AT E + + ++ +LE NPT P ++ LLN KW L+YT+
Sbjct: 99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTS 157
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK L++ + + G A E + V + +LE NPT P++ DLLNG W L+YT S
Sbjct: 135 LKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTAS 194
Query: 146 QSIL 149
+L
Sbjct: 195 SELL 198
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 69 ASVSFFPAFLNKGKDAKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEP 128
++VS + ++ + LK L +++ DRG + + + + ++ +LE NPT P
Sbjct: 76 STVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAP 135
Query: 129 LKSD-LLNGKWELIYTTSQSI--LQTQRPRFLRSVRNY-QAINVDTLRAQNME--SGPFF 182
++ LLNGKW L YT+ + L ++R L V Q I+ D+ QN +GPF
Sbjct: 136 NEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFS 195
Query: 183 N---QVTADLTPLNSRKVAVQFDYFKIG 207
A + ++V ++F+ IG
Sbjct: 196 TTSFSTNAKFEIRSPKRVQIKFEQGVIG 223
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK+ L+++ DRG + + + + ++ +LE NPT P ++ LLNGKW L YTT
Sbjct: 99 LKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTF 158
Query: 146 QSI--LQTQRPRFLRSVRNYQAINVDTLRAQNME--SGPF 181
+ L ++ ++ Q I+ + L QN SGP
Sbjct: 159 AGLFPLLSRNLPLVKVEEISQTIDSENLTVQNSVQFSGPL 198
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWELIYTT 144
LK L++++ DRG A+ E + + + +LE NPT P ++ LLNGKW L YT+
Sbjct: 86 LKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTS 144
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 57/204 (27%)
Query: 86 VLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
+LK++L +++ +RG A+ E + + ++ +LE NP P ++ LLNGKW L YT+
Sbjct: 101 LLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS 160
Query: 145 SQS---ILQTQRPRFLRSVRNYQAINVDTLRAQN--MESGPFFN---QVTADLTPLNSRK 196
+L +R Q I+ ++ QN + +GP A + ++
Sbjct: 161 FSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKR 220
Query: 197 VAVQFDYFKIG---------------------------GLI------------------P 211
V ++F+ IG GLI P
Sbjct: 221 VQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPP 280
Query: 212 VKAP---NTARGELETTYLDEDLR 232
+K P N A+ L TTYLD++LR
Sbjct: 281 IKFPITNNNAQSWLLTTYLDDELR 304
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 57/204 (27%)
Query: 86 VLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
+LK++L +++ +RG A+ E + + ++ +LE NP P ++ LLNGKW L YT+
Sbjct: 101 LLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS 160
Query: 145 SQS---ILQTQRPRFLRSVRNYQAINVDTLRAQN--MESGPFFN---QVTADLTPLNSRK 196
+L +R Q I+ ++ QN + +GP A + ++
Sbjct: 161 FSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKR 220
Query: 197 VAVQFDYFKIG---------------------------GLI------------------P 211
V ++F+ IG GLI P
Sbjct: 221 VQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPP 280
Query: 212 VKAP---NTARGELETTYLDEDLR 232
+K P N A+ L TTYLD++LR
Sbjct: 281 IKFPITNNNAQSWLLTTYLDDELR 304
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLK-SDLLNGKWELIYTTS 145
LK L++ + D G A+ E + V ++ +LE NPT EP++ + LL G W LIYT
Sbjct: 149 LKRCLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAY 208
Query: 146 QSIL 149
+L
Sbjct: 209 SELL 212
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWELIYTT 144
LK L ++ DRG A+ E + + ++ +LE NP P ++ LLNGKW L+YT+
Sbjct: 103 LKRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTS 161
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYT 143
LK L +++ + G +A E + V ++ +LE +NPT PL++ +LL+G W L+YT
Sbjct: 153 LKRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYT 210
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK L + + + G A E + V +I +LE +NPT+ P+++ +LL+G W L+YT
Sbjct: 137 LKRCLADTVYGTELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAF 196
Query: 146 QSIL 149
+L
Sbjct: 197 SELL 200
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 88 KEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKE--PLKSDLLNGKWELIYTTS 145
K +LL A+ RG AT + + +E+ +EG N +E P+K L+G W L YT++
Sbjct: 64 KHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPVK---LDGTWRLQYTSA 120
Query: 146 QSIL 149
++
Sbjct: 121 PDVV 124
>sp|B8G4D0|FMT_CHLAD Methionyl-tRNA formyltransferase OS=Chloroflexus aggregans (strain
MD-66 / DSM 9485) GN=fmt PE=3 SV=1
Length = 309
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 175 NMESGPFFNQVTADLTPLNSRKVAVQFDYFKIGGLIPVKA-PNTARGELE 223
M+SGP Q DL P N+R + + F++G + V+ P ARGE+E
Sbjct: 141 GMDSGPILAQAMVDLPP-NARTGPLTDELFRLGATLLVEVLPRYARGEIE 189
>sp|B9LFJ4|FMT_CHLSY Methionyl-tRNA formyltransferase OS=Chloroflexus aurantiacus
(strain ATCC 29364 / DSM 637 / Y-400-fl) GN=fmt PE=3
SV=1
Length = 310
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 175 NMESGPFFNQVTADLTPLNSRKVAVQFDYFKIGGLIPVKA-PNTARGELE 223
+M+SGP Q DL P +R + + F+IG + V+ P ARGE+E
Sbjct: 141 SMDSGPILAQAVVDLPP-TARAGQLTDELFRIGADLLVQVLPRYARGEIE 189
>sp|A9WAR0|FMT_CHLAA Methionyl-tRNA formyltransferase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=fmt PE=3 SV=1
Length = 310
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 175 NMESGPFFNQVTADLTPLNSRKVAVQFDYFKIGGLIPVKA-PNTARGELE 223
+M+SGP Q DL P +R + + F+IG + V+ P ARGE+E
Sbjct: 141 SMDSGPILAQAVVDLPP-TARAGQLTDELFRIGADLLVQVLPRYARGEIE 189
>sp|Q03GG4|SYL_PEDPA Leucine--tRNA ligase OS=Pediococcus pentosaceus (strain ATCC 25745
/ 183-1w) GN=leuS PE=3 SV=1
Length = 805
Score = 32.7 bits (73), Expect = 1.9, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 66 KWRASVSFFPAFLNKGKDAKVLKEELLEAIAPLDR---GAEATPEDQQRVEQIARKLE-- 120
+W S +F +++ D K+ E+LL+ P+D GAE + L
Sbjct: 493 QWAGSSWYFLRYVDPKNDQKIADEDLLKEWLPVDLYVGGAEHAVLHLLYARFWHKVLYDL 552
Query: 121 GVNPTKEPLKSDLLNGKWELIYTTSQSILQTQRPRFLRSVRNYQAINVDTLRAQNMESGP 180
GV PTKEP + + G +I ++ + + + + DTLR M GP
Sbjct: 553 GVVPTKEPFQKLVNQG---MILGSNHEKMSKSKGNVVNPDDIVERFGADTLRLYEMFMGP 609
Query: 181 FFNQVTADLTPLN-SRK 196
V LN SRK
Sbjct: 610 LTESVAWSEDGLNGSRK 626
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 98 LDRGAEATPEDQQRVEQIARKLEGVN-PTKEPLKSDLLNGKWELIYTTSQS 147
L+RG A+ +D +R E A++LE P D L GKW L+Y+++ S
Sbjct: 98 LNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFS 148
>sp|P23445|FLII_BACSU Flagellum-specific ATP synthase OS=Bacillus subtilis (strain 168)
GN=fliI PE=3 SV=2
Length = 438
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 42 KLNNNYQNNRNLSSSEYYHSSASQKWRASVSFFP---AFLNKGKDAKVLKEELLEAIAPL 98
+L + YQN+ +L + Y +S++ ++ F+P FL +G D L EE + A+ L
Sbjct: 374 ELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPALLEESIAALTSL 433
>sp|Q9XW87|LONP2_CAEEL Lon protease homolog 2, peroxisomal OS=Caenorhabditis elegans
GN=Y75B8A.4 PE=3 SV=1
Length = 773
Score = 32.0 bits (71), Expect = 4.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 69 ASVSFFPAFLNKGKDAKVLKEEL---LEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPT 125
A V ++N+ KDA LK ++ LEA P+D P + +VEQ+ KL + +
Sbjct: 185 ARVEMCIKWMNEKKDANTLKLKVPNSLEASFPVDGKKRKIPNVKNQVEQLEEKLNAIEFS 244
Query: 126 KE 127
E
Sbjct: 245 DE 246
>sp|O81304|PAP11_ARATH Probable plastid-lipid-associated protein 11, chloroplastic
OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 84 AKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEP--LKSDLLNGKWELI 141
A+ K +LLE I+ DRG T +D ++ ++I +E + D L+ W L+
Sbjct: 33 AQRAKRKLLELISEEDRGLR-TQKDPKKRDEIVNAIESMTVIGRSSITTDDSLSATWRLL 91
Query: 142 YTT-SQSILQTQRPRFLRSVRN--YQAINVDTLRAQNMES----GPFFNQVTADLTPLNS 194
+TT + + ++ + Q I+V+ N+ + G FF V +D+ +
Sbjct: 92 WTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFF--VRSDIDIASP 149
Query: 195 RKVAVQFDYFKIGGL---IPVKAPNTARGELETTYLDEDLR 232
++V +F+ + G +P+ P +G E Y+D ++R
Sbjct: 150 QRVNFRFNSAVLRGKNWELPL--PPFGKGWFENVYMDGEIR 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,424,469
Number of Sequences: 539616
Number of extensions: 3263995
Number of successful extensions: 9230
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 9188
Number of HSP's gapped (non-prelim): 52
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)