Query 026863
Match_columns 232
No_of_seqs 160 out of 1343
Neff 5.4
Searched_HMMs 29240
Date Tue Mar 26 00:03:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3w_A Phosphoglucosamine muta 100.0 7E-33 2.4E-37 261.3 13.8 125 72-215 2-134 (443)
2 3pdk_A Phosphoglucosamine muta 100.0 1.3E-32 4.4E-37 261.5 13.7 127 71-216 22-155 (469)
3 2f7l_A 455AA long hypothetical 100.0 1.6E-32 5.3E-37 258.9 13.8 125 72-218 2-133 (455)
4 1wqa_A Phospho-sugar mutase; a 100.0 8.1E-32 2.8E-36 254.0 15.7 128 73-218 3-137 (455)
5 3uw2_A Phosphoglucomutase/phos 100.0 1E-31 3.5E-36 256.4 15.5 129 71-217 24-164 (485)
6 1p5d_X PMM, phosphomannomutase 100.0 1E-31 3.5E-36 253.9 15.1 126 72-217 11-142 (463)
7 1tuo_A Putative phosphomannomu 100.0 9.3E-31 3.2E-35 247.7 13.4 122 73-214 12-141 (464)
8 4hjh_A Phosphomannomutase; str 100.0 2.2E-30 7.4E-35 246.2 12.0 129 69-215 6-140 (481)
9 2z0f_A Putative phosphoglucomu 100.0 3.6E-30 1.2E-34 246.5 12.0 138 58-214 9-162 (524)
10 3na5_A Phosphoglucomutase; iso 100.0 7.2E-30 2.5E-34 247.9 13.3 140 58-215 49-203 (570)
11 1kfi_A Phosphoglucomutase 1; p 99.9 3.8E-28 1.3E-32 235.3 11.2 142 43-215 2-163 (572)
12 3pmg_A Alpha-D-glucose-1,6-bis 99.9 7.6E-28 2.6E-32 233.2 7.4 125 74-215 15-152 (561)
13 2dka_A Phosphoacetylglucosamin 99.3 1.4E-12 4.9E-17 125.6 5.5 71 58-203 9-80 (544)
14 2dka_A Phosphoacetylglucosamin 97.9 9E-06 3.1E-10 78.2 5.8 48 125-172 132-180 (544)
15 1o1x_A Ribose-5-phosphate isom 90.8 0.97 3.3E-05 37.0 8.0 61 126-188 13-80 (155)
16 2vvr_A Ribose-5-phosphate isom 89.7 0.92 3.2E-05 36.9 6.9 60 127-188 3-69 (149)
17 2vvp_A Ribose-5-phosphate isom 87.3 1.1 3.7E-05 36.9 5.9 60 127-188 5-72 (162)
18 3he8_A Ribose-5-phosphate isom 86.8 2 6.8E-05 34.9 7.2 60 127-188 2-68 (149)
19 3ph3_A Ribose-5-phosphate isom 85.4 2.5 8.4E-05 35.1 7.2 61 126-188 21-88 (169)
20 3s5p_A Ribose 5-phosphate isom 85.2 2.2 7.7E-05 35.2 6.8 62 126-189 22-90 (166)
21 4em8_A Ribose 5-phosphate isom 82.4 4.2 0.00014 33.0 7.2 62 126-189 8-75 (148)
22 2ppw_A Conserved domain protei 75.8 5.2 0.00018 34.4 6.1 62 126-188 4-78 (216)
23 3k7p_A Ribose 5-phosphate isom 75.4 5 0.00017 33.5 5.7 61 127-189 24-93 (179)
24 2ehp_A AQ_1627 protein; putati 70.2 14 0.00049 28.5 6.7 55 94-159 19-73 (126)
25 3sgw_A Ribose 5-phosphate isom 68.3 7.8 0.00027 32.5 5.4 61 126-188 30-100 (184)
26 3ono_A Ribose/galactose isomer 63.1 8.4 0.00029 33.0 4.6 61 126-189 4-78 (214)
27 1byr_A Protein (endonuclease); 62.8 30 0.001 26.0 7.5 85 127-222 57-152 (155)
28 4dik_A Flavoprotein; TM0755, e 56.3 56 0.0019 29.8 9.3 52 99-158 247-299 (410)
29 1y80_A Predicted cobalamin bin 56.0 27 0.00091 28.4 6.5 58 125-188 88-149 (210)
30 2yxb_A Coenzyme B12-dependent 53.8 32 0.0011 27.2 6.4 57 125-187 18-78 (161)
31 2i2x_B MTAC, methyltransferase 50.7 31 0.0011 29.3 6.2 57 125-187 123-183 (258)
32 3ezx_A MMCP 1, monomethylamine 50.6 1.1E+02 0.0036 25.3 10.2 54 125-184 92-149 (215)
33 3fni_A Putative diflavin flavo 44.6 51 0.0017 25.6 6.2 37 126-162 5-42 (159)
34 3c5y_A Ribose/galactose isomer 43.2 17 0.00059 31.4 3.4 62 127-188 23-94 (231)
35 2h54_A Caspase-1; allosteric s 41.8 1.4E+02 0.0047 24.2 9.9 90 127-222 46-155 (178)
36 1ccw_A Protein (glutamate muta 41.4 28 0.00096 26.7 4.1 56 126-187 4-63 (137)
37 2j32_A Caspase-3; Pro-caspase3 39.3 1.5E+02 0.0052 25.0 8.8 90 127-222 19-124 (250)
38 2vqe_K 30S ribosomal protein S 38.2 1.3E+02 0.0045 23.4 7.6 60 94-165 55-115 (129)
39 3h11_B Caspase-8; cell death, 33.5 1.8E+02 0.0061 24.9 8.5 83 134-222 43-133 (271)
40 3bul_A Methionine synthase; tr 32.1 76 0.0026 30.7 6.3 57 125-187 98-158 (579)
41 3e4c_A Caspase-1; zymogen, inf 30.2 1.3E+02 0.0045 26.3 7.1 90 127-222 63-172 (302)
42 1pyo_A Caspase-2; apoptosis, c 29.8 1.9E+02 0.0065 23.1 7.5 83 134-222 52-143 (167)
43 5nul_A Flavodoxin; electron tr 27.3 1.5E+02 0.0052 21.5 6.1 53 129-189 2-57 (138)
44 3hly_A Flavodoxin-like domain; 26.8 1E+02 0.0035 23.6 5.3 32 128-159 3-35 (161)
45 3tnj_A Universal stress protei 26.3 89 0.003 22.7 4.6 41 126-166 7-47 (150)
46 1o5k_A DHDPS, dihydrodipicolin 24.9 3.3E+02 0.011 23.4 8.7 100 46-159 14-113 (306)
47 4edg_A DNA primase; catalytic 24.2 1.4E+02 0.0049 26.5 6.3 72 63-159 157-229 (329)
48 3u5c_O RP59A, 40S ribosomal pr 24.2 1E+02 0.0035 24.3 4.8 64 94-165 54-122 (137)
49 1q77_A Hypothetical protein AQ 23.1 89 0.003 22.4 4.0 39 126-164 5-44 (138)
50 3r8n_K 30S ribosomal protein S 22.6 2.2E+02 0.0075 21.7 6.3 60 94-165 45-105 (117)
51 3hgm_A Universal stress protei 22.3 64 0.0022 23.3 3.0 42 126-167 3-44 (147)
52 1jmv_A USPA, universal stress 22.1 1.1E+02 0.0039 21.8 4.5 37 126-162 3-39 (141)
53 1qtn_A Caspase-8; apoptosis, d 22.1 3E+02 0.01 21.8 8.5 82 134-222 49-139 (164)
54 1m72_A Caspase-1; caspase, cys 21.8 3.6E+02 0.012 22.9 8.3 83 134-222 50-139 (272)
55 2xzm_K RPS14E; ribosome, trans 21.3 2.1E+02 0.007 22.9 6.1 63 94-165 68-136 (151)
56 1e5d_A Rubredoxin\:oxygen oxid 20.3 4.1E+02 0.014 22.7 9.3 54 98-160 234-288 (402)
57 1f1j_A Caspase-7 protease; cas 20.2 2.8E+02 0.0096 24.2 7.3 90 127-222 72-177 (305)
No 1
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=7e-33 Score=261.30 Aligned_cols=125 Identities=21% Similarity=0.256 Sum_probs=113.7
Q ss_pred hhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCC-eEEEEecCCCChHHHHHHHHHHHH
Q 026863 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDV-KVSLGKDPRVSGPSLSVAVFAGLA 150 (232)
Q Consensus 72 ~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~-~VvVGrD~R~SS~~La~Ala~gL~ 150 (232)
+++||++||||++++| +|||+++.++|+|||+++.++ + .. +|+||||+|.+|++|++++++||+
T Consensus 2 ~~~FGt~GiRG~~~~g------~lt~~~v~~~g~a~~~~l~~~-----~----~~~~VvVG~D~R~ss~~l~~a~~~gl~ 66 (443)
T 3i3w_A 2 AKYFGTDGIRGEVANS------TITVEFTQKLGNAVGSLINQK-----N----YPKFVIVGQDTRSSGGFLKFALVSGLN 66 (443)
T ss_dssp -CCCCSSSSEEEBSSS------SBSHHHHHHHHHHHHHHHHHT-----T----CCSEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred CcccCCCCeeEEeCCC------CCCHHHHHHHHHHHHHHHHhc-----C----CCCeEEEEeCCCcCHHHHHHHHHHHHH
Confidence 5799999999999854 799999999999999999764 1 24 899999999999999999999999
Q ss_pred HCCCeEEEeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEecc-------chHHHHHHHHhh
Q 026863 151 RAGCLVFDMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFW-------ISLYEIRYCCVT 215 (232)
Q Consensus 151 a~Gv~VidlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~-------~~~~eIe~~~~~ 215 (232)
++|++|+++|++|||+++|++. +++++|||||||||| |++||||||+.. +.+++||+.+..
T Consensus 67 s~G~~V~~~g~~pTP~~~~av~--~~~a~~GImITASHN--P~~~NGiK~~~~~G~~l~~~~~~~Ie~~~~~ 134 (443)
T 3i3w_A 67 AAGIDVLDLGVVPTPVVAFMTV--KHRAAAGFVITASHN--KFTDNGIKLFSSNGFKLDDALEEEVEDMIDG 134 (443)
T ss_dssp HHTCEEEEEEECCHHHHHHHHH--HTTCSEEEEECCTTS--CTTEEEEEEEETTSCBCCHHHHHHHHHHHTS
T ss_pred HCCCeEEEeCCCCHHHHHHHHH--hcCCCeEEEEEECCC--CchhCeEEEEcCCCCcCCHHHHHHHHHHHhc
Confidence 9999999999999999999996 688999999999999 999999999865 357899999865
No 2
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=99.98 E-value=1.3e-32 Score=261.46 Aligned_cols=127 Identities=27% Similarity=0.310 Sum_probs=115.3
Q ss_pred hhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHH
Q 026863 71 IRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLA 150 (232)
Q Consensus 71 ~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~ 150 (232)
++++||++||||++++ +||++++.++|+|||+++.+.. ...+|+||||+|.+|++|++++++||+
T Consensus 22 m~~~FGt~GiRG~~~~-------~lt~~~v~~~g~a~~~~l~~~~--------~~~~VvIG~D~R~ss~~~~~a~a~gl~ 86 (469)
T 3pdk_A 22 MGKYFGTDGVRGVANK-------ELTPELAFKIGRFGGYVLTKDT--------DRPKVIIGRDTRISGHMLEGALVAGLL 86 (469)
T ss_dssp -CCSCBTTBEEEEBTT-------TBCHHHHHHHHHHHHHHHHTTC--------SSCEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred cccccCCCCeeeecCC-------CCCHHHHHHHHHHHHHHHHhhC--------CCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3679999999999986 8999999999999999997631 236899999999999999999999999
Q ss_pred HCCCeEEEeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEecc-------chHHHHHHHHhhc
Q 026863 151 RAGCLVFDMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFW-------ISLYEIRYCCVTD 216 (232)
Q Consensus 151 a~Gv~VidlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~-------~~~~eIe~~~~~e 216 (232)
++|++|+++|++|||+++|++. +++++|||||||||| |++||||||+.. +.+++||+.+++.
T Consensus 87 s~Gi~V~~~g~~pTP~l~fav~--~~~a~~GImITASHN--P~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~~~ 155 (469)
T 3pdk_A 87 STGAEVMRLGVISTPGVAYLTK--ALDAQAGVMISASHN--PVQDNGIKFFGSDGFKLTDEQEAEIEALLDKE 155 (469)
T ss_dssp TTTCEEEEEEECCHHHHHHHHH--HHTCSEEEEECCTTS--CTTEEEEEEEETTSSBCCHHHHHHHHHHHHSS
T ss_pred HCCCEEEEeCCCChHHHHHHHH--hcCCCeEEEEEeCCC--cchhCcEEEecCCCcCCCHHHHHHHHHHHhcc
Confidence 9999999999999999999996 688999999999999 999999999854 3589999999764
No 3
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=99.98 E-value=1.6e-32 Score=258.90 Aligned_cols=125 Identities=26% Similarity=0.343 Sum_probs=115.0
Q ss_pred hhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHH
Q 026863 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (232)
Q Consensus 72 ~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a 151 (232)
+++||++||||+++. +||++++.++|+|||+++.++ .+|+||||+|.+|++|+++++++|++
T Consensus 2 ~~~Fgt~GiRG~~~~-------~lt~~~v~~~~~a~~~~l~~~-----------~~VvIG~D~R~ss~~~~~a~a~gl~~ 63 (455)
T 2f7l_A 2 GKLFGTDGVRGIVNK-------ELTPELVLKLSKAIGTFFGKN-----------SKILVGRDVRAGGDMLVKIVEGGLLS 63 (455)
T ss_dssp CSSCCSSSEEEEBTT-------TBCHHHHHHHHHHHHHHHCTT-----------CEEEEEECSCTTHHHHHHHHHHHHHH
T ss_pred CCcccCCCeeeecCC-------CcCHHHHHHHHHHHHHHHccC-----------CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 468999999999985 899999999999999998642 57999999999999999999999999
Q ss_pred CCCeEEEeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEecc-------chHHHHHHHHhhcCC
Q 026863 152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFW-------ISLYEIRYCCVTDDC 218 (232)
Q Consensus 152 ~Gv~VidlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~-------~~~~eIe~~~~~e~~ 218 (232)
+|++|+++|++|||+++|++. ++++++||||||||| |++|||+||+.. +.+++||+.+++++.
T Consensus 64 ~G~~V~~~g~~pTP~~~~av~--~~~~~~GImITASHN--P~~~NGiK~~~~~G~~~~~~~~~~I~~~~~~~~~ 133 (455)
T 2f7l_A 64 VGVEVYDGGMAPTPALQYAVK--TLGYDGGVVITASHN--PAPYNGIKVVDKDGIEIRREKENEIEDLFFTERF 133 (455)
T ss_dssp TTCEEEEEEECCHHHHHHHHH--HHCCSEEEEECCTTS--CTTEEEEEEECTTSSBCCHHHHHHHHHHHHHTCC
T ss_pred CCCcEEEcCCCCcHHHHHHHH--hcCCCeEEEEEcCCC--ChHHCEEEEECCCCCCCCHHHHHHHHHHHhcCCC
Confidence 999999999999999999996 688999999999999 999999999964 358999999987654
No 4
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=99.97 E-value=8.1e-32 Score=254.01 Aligned_cols=128 Identities=29% Similarity=0.345 Sum_probs=115.6
Q ss_pred hhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHHC
Q 026863 73 RLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARA 152 (232)
Q Consensus 73 ~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a~ 152 (232)
++||++||||++++ +||++++.++|+|||+++.++. ..+.+|+||||+|.+|++|+++++++|+++
T Consensus 3 ~~Fgt~GiRG~~~~-------~lt~~~v~~~~~a~~~~l~~~~-------~~~~~VvIG~D~R~ss~~l~~a~~~gl~~~ 68 (455)
T 1wqa_A 3 KLFGTFGVRGIANE-------KITPEFAMKIGMAFGTLLKREG-------RKKPLVVVGRDTRVSGEMLKEALISGLLSV 68 (455)
T ss_dssp TTCBTTBEEEEBTT-------TBCHHHHHHHHHHHHHHHHHTT-------CSSCEEEEEECSCTTHHHHHHHHHHHHHHT
T ss_pred cccCCCceeeecCC-------CcCHHHHHHHHHHHHHHHHhcC-------CCCCeEEEEeCCCcCHHHHHHHHHHHHHHc
Confidence 58999999999986 8999999999999999997641 013579999999999999999999999999
Q ss_pred CCeEEEeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEecc-------chHHHHHHHHhhcCC
Q 026863 153 GCLVFDMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFW-------ISLYEIRYCCVTDDC 218 (232)
Q Consensus 153 Gv~VidlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~-------~~~~eIe~~~~~e~~ 218 (232)
|++|+++|++|||+++|++. ++++++||||||||| |++|||+||+.. +.+++||+.+.+++.
T Consensus 69 G~~V~~~g~~pTP~l~~~v~--~~~~~~GimITASHN--P~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~ 137 (455)
T 1wqa_A 69 GCDVIDVGIAPTPAVQWATK--HFNADGGAVITASHN--PPEYNGIKLLEPNGMGLKKEREAIVEELFFKEDF 137 (455)
T ss_dssp TCEEEEEEECCHHHHHHHHH--HTTCSEEEEECCTTS--CTTEEEEEEECTTSSBCCHHHHHHHHHHHHHTCC
T ss_pred CCeEEEeCCCChHHHHHHHH--hcCCCEEEEEEeCCC--ChHHCeEEEEcCCCCcCCHHHHHHHHHHHhcCCc
Confidence 99999999999999999996 688999999999999 999999999965 358999999987643
No 5
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=99.97 E-value=1e-31 Score=256.42 Aligned_cols=129 Identities=24% Similarity=0.311 Sum_probs=115.5
Q ss_pred hhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHH
Q 026863 71 IRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLA 150 (232)
Q Consensus 71 ~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~ 150 (232)
.+++|+++||||++++ +||++++.++|+|||+++.++. ..+|+||||+|.+|++|+++++++|+
T Consensus 24 ~~~~Fgt~GiRG~~~~-------~lt~~~~~~ig~A~~~~l~~~~---------~~~VvVG~D~R~ss~~~~~a~a~gl~ 87 (485)
T 3uw2_A 24 SQSIFKAYDIRGVIGK-------TLDADVARSIGRAFGSEVRAQG---------GDAVVVARDGRLSGPELVGALADGLR 87 (485)
T ss_dssp CGGGBCSSSEEEEBTT-------TBCHHHHHHHHHHHHHHHHHTT---------CCEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred cccccccCCEEEEeCC-------CCCHHHHHHHHHHHHHHHHHcC---------CCEEEEEECCCcCHHHHHHHHHHHHH
Confidence 3679999999999985 8999999999999999997641 26899999999999999999999999
Q ss_pred HCCCeEEEeccCChhHHHHhhhcC------CCCCCceEEEccCCCCCCCCCCcEEEecc------chHHHHHHHHhhcC
Q 026863 151 RAGCLVFDMGLATTPACFMSTLLP------PFAYDASIMVGYMYKVNNFNRIAIEFAFW------ISLYEIRYCCVTDD 217 (232)
Q Consensus 151 a~Gv~VidlG~~pTP~l~yav~~~------~~~a~gGImITASHN~~P~~~NGiK~~~~------~~~~eIe~~~~~e~ 217 (232)
++|++|+++|++|||+++|++... ++++++||||||||| |++|||+||+.. +.+++||+.+..++
T Consensus 88 a~Gi~V~~~g~~pTP~l~~av~~~~~~~~~~~~~~~GImITASHN--P~~~NGiK~~~~G~~i~~~~~~~I~~~~~~~~ 164 (485)
T 3uw2_A 88 AAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHN--PPDYNGFKMVLRGAAIYGDQIQGLYKRIVDAR 164 (485)
T ss_dssp HTTCEEEEEEECCHHHHHHHTTSCEEETTEEECCCCEEEECCTTS--CTTEEEEEEEETTEECCTHHHHHHHHHHHTTC
T ss_pred HCCCEEEEeCCCChHHHHHHHhccccccccccCCCeEEEEEeCCC--CcccceEEEecCCCCCCHHHHHHHHHHHhcCC
Confidence 999999999999999999998410 468999999999999 999999999853 35899999988765
No 6
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=99.97 E-value=1e-31 Score=253.85 Aligned_cols=126 Identities=23% Similarity=0.360 Sum_probs=115.2
Q ss_pred hhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHH
Q 026863 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (232)
Q Consensus 72 ~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a 151 (232)
+++||++||||++++ +||++++.++|+|||+++.+. + ..+|+||||+|.+|++|++++++||++
T Consensus 11 ~~~Fgt~GiRG~~~~-------~~t~~~~~~i~~a~~~~l~~~-----~----~~~VvVG~D~R~ss~~l~~a~~~gl~a 74 (463)
T 1p5d_X 11 ASIFRAYDIRGVVGD-------TLTAETAYWIGRAIGSESLAR-----G----EPCVAVGRDGRLSGPELVKQLIQGLVD 74 (463)
T ss_dssp GGGBCSSSEEEEBTT-------TBCHHHHHHHHHHHHHHHHHT-----T----CCEEEEEECSCTTHHHHHHHHHHHHHT
T ss_pred ccccCCCCcceeCCC-------CCCHHHHHHHHHHHHHHHHHc-----C----CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 679999999999985 899999999999999999764 1 258999999999999999999999999
Q ss_pred CCCeEEEeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEecc------chHHHHHHHHhhcC
Q 026863 152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFW------ISLYEIRYCCVTDD 217 (232)
Q Consensus 152 ~Gv~VidlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~------~~~~eIe~~~~~e~ 217 (232)
+|++|+++|++|||+++|++. ++++++||||||||| |++||||||+.. +.+++||+.+.+++
T Consensus 75 ~G~~V~~~g~~pTP~l~~av~--~~~~~~GImITASHN--P~~~NGiK~~~~G~~i~~~~~~~I~~~~~~~~ 142 (463)
T 1p5d_X 75 CGCQVSDVGMVPTPVLYYAAN--VLEGKSGVMLTGSHN--PPDYNGFKIVVAGETLANEQIQALRERIEKND 142 (463)
T ss_dssp BTCEEEEEEECCHHHHHHHHH--HSSCSEEEEECCTTS--CTTEEEEEEEETTEECCTHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCChHHHHHHHH--hcCCCeEEEEccCCC--CcccceEEEECCCccCCHHHHHHHHHHHhcCC
Confidence 999999999999999999996 688999999999999 999999999852 35899999998654
No 7
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=99.97 E-value=9.3e-31 Score=247.71 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=111.5
Q ss_pred hhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHHC
Q 026863 73 RLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARA 152 (232)
Q Consensus 73 ~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a~ 152 (232)
-+||++||||+++. +||++++.++|+|||+++.++. ..+|+||||+|.+|++|+++++++|+++
T Consensus 12 l~FGt~GiRG~~~~-------~lt~~~v~~~~~a~~~~l~~~~---------~~~VvVG~D~R~ss~~~~~a~a~gl~~~ 75 (464)
T 1tuo_A 12 IRFGTEGFRGVIAR-------EFTFATLHRLAEAYGRHLLERG---------GGLVVVGHDTRFLADAFARALSGHLAGM 75 (464)
T ss_dssp CCCCSSSEEEEBTT-------TBCHHHHHHHHHHHHHHHHHTT---------CCEEEEEECSSTTHHHHHHHHHHHHHHH
T ss_pred ccccCCCcceecCC-------CcCHHHHHHHHHHHHHHHHHhC---------CCeEEEeeCCCCCHHHHHHHHHHHHHHC
Confidence 45999999999985 8999999999999999998641 2579999999999999999999999999
Q ss_pred CCeEE-EeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEecc-------chHHHHHHHHh
Q 026863 153 GCLVF-DMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFW-------ISLYEIRYCCV 214 (232)
Q Consensus 153 Gv~Vi-dlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~-------~~~~eIe~~~~ 214 (232)
|++|+ +.|++|||+++|++. ++++++||||||||| |++|||+||+.+ +.+++||+.++
T Consensus 76 G~~V~~~~g~~pTP~~~~av~--~~~~~~GImITASHN--P~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~ 141 (464)
T 1tuo_A 76 GLKVVLLKGPVPTPLLSFAVR--HLKAAGGAMLTASHN--PPQYLGVKFKDATGGPIAQEEAKAIEALVP 141 (464)
T ss_dssp TCEEEEESSSCCHHHHHHHHH--HTTCSEEEEECCTTS--CTTEEEEEEEETTTEECCHHHHHHHHHTCC
T ss_pred CCeEEEcCCCCCHHHHHHHHH--HhCCCceEEEcCCCC--CchHCCEEEEcCCCCcCChHHHHHHHHHhc
Confidence 99996 789999999999996 689999999999999 999999999975 35899998886
No 8
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=99.96 E-value=2.2e-30 Score=246.19 Aligned_cols=129 Identities=21% Similarity=0.158 Sum_probs=110.5
Q ss_pred HHhhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHH
Q 026863 69 DRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAG 148 (232)
Q Consensus 69 ~~~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~g 148 (232)
...+..||++||||++ . +||+++|.++|+|||+|+.+... .....+|+||||+|.+|++|+++++++
T Consensus 6 ~~~~~~FGT~GiRG~~-~-------~lt~~~v~~~~~a~a~~l~~~~~-----~~~~~~VvVG~D~R~ss~~~~~a~~~g 72 (481)
T 4hjh_A 6 SSNSLKFGTSGLRGLA-V-------ELNGLPAYAYTMAFVQMLAAKGQ-----LQKGDKVFVGRDLRPSSPDIAALAMGA 72 (481)
T ss_dssp --CCCEECSSSEEEEH-H-------HHTTHHHHHHHHHHHHHHHHTTS-----CCTTCEEEEEECSSTTHHHHHHHHHHH
T ss_pred ccccCcccCCCcceec-C-------CCCHHHHHHHHHHHHHHHHhhcc-----ccCCCeEEEeecCCcCHHHHHHHHHHH
Confidence 3344579999999999 4 89999999999999999976410 012368999999999999999999999
Q ss_pred HHHCCCeEEEeccCChhHHHHhhhcCCCCCCceEEEccCCCCCCCCCCcEEEeccc------hHHHHHHHHhh
Q 026863 149 LARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFWI------SLYEIRYCCVT 215 (232)
Q Consensus 149 L~a~Gv~VidlG~~pTP~l~yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~~------~~~eIe~~~~~ 215 (232)
|+++|++|+++|++|||+++|++. ++++ +||||||||| |++||||||+..+ .+++|++.+..
T Consensus 73 l~a~Gi~V~~~g~~pTP~l~fav~--~~~~-~GImITASHN--P~~~NGiK~~~~~G~~~~~~e~~I~~~~~~ 140 (481)
T 4hjh_A 73 IEDAGFTPVNCGVLPTPALSYYAM--GAKA-PSIMVTGSHI--PDDRNGLKFYRRDGEIDKDDEAAISAAYRK 140 (481)
T ss_dssp HHHTTCEEEEEEECCHHHHHHHHH--HTTC-CEEEECCTTS--CTTEEEEEEEETTEECCHHHHHHHHHHHHT
T ss_pred HHHCCCEEEEeCCcCcHHHHHHHH--hcCC-ceEEEecCCC--CCCCCCEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 999999999999999999999996 5676 7999999999 9999999998653 47778887753
No 9
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=99.96 E-value=3.6e-30 Score=246.55 Aligned_cols=138 Identities=17% Similarity=0.058 Sum_probs=116.0
Q ss_pred cccccccchhhHHhhhhccccceeeee-ccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCC
Q 026863 58 KYNEVVVDEEMDRIRRLQNGSDVRGVA-LEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRV 136 (232)
Q Consensus 58 ~~~~~~~~~~m~~~~~lFg~sGIRGi~-~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~ 136 (232)
+|+++-++..-...+.+||++||||++ +. +||++++.++|+|||+++.+. + ...+|+||||+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~FGT~GiRG~~~~~-------~lt~~~v~~i~~a~~~~l~~~-----~---~~~~VvIG~D~R~ 73 (524)
T 2z0f_A 9 LYYEATPDPQNPLEGVRFGTSGHRGSSLKA-------TFTEAHVLAIAQAIAELRPSF-----G---ATGPLFLAKDTHA 73 (524)
T ss_dssp HHHHCCCCTTCGGGSCCEETTEEEECGGGT-------SSCHHHHHHHHHHHHHHTTTT-----T---CCSCEEEEECSCT
T ss_pred HHhhcCCCcCCccCcCcccCccccCCcccC-------CCCHHHHHHHHHHHHHHHHHh-----C---CCCeEEEEeCCCc
Confidence 577777776655566789999999975 43 899999999999999998653 1 1246999999999
Q ss_pred ChHHHHHHHHHHHHHCCCeEEEe---ccCChhHHHHhhhcCCCC-----CCceEEEccCCCCCCCCCCcEEEeccc----
Q 026863 137 SGPSLSVAVFAGLARAGCLVFDM---GLATTPACFMSTLLPPFA-----YDASIMVGYMYKVNNFNRIAIEFAFWI---- 204 (232)
Q Consensus 137 SS~~La~Ala~gL~a~Gv~Vidl---G~~pTP~l~yav~~~~~~-----a~gGImITASHN~~P~~~NGiK~~~~~---- 204 (232)
+|++++++++++|+++|++|+++ |++|||+++|++. +++ +++||||||||| |++||||||+..+
T Consensus 74 ~S~~~~~~~~~gl~a~Gi~V~~~~~~G~~pTP~l~~av~--~~~~~~~~a~~GImITASHN--P~~~NGiK~~~~~G~~~ 149 (524)
T 2z0f_A 74 LSEPAWATALSVFAAHGIEVRVEADGDYTPTPLVSLAIL--EHNAHHEAKADGVLLTPSHN--PPEDGGFKYNPPTGGPA 149 (524)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEESSSSCCCHHHHHHHHH--HHHTTCSSCCEEEEECC--C--CTTCEEEEEECTTSSCC
T ss_pred chHHHHHHHHHHHHHCCCEEEEeCCCCccCcHHHHHHHH--HhCCCccccceEEEEcCCCC--CchhCCEEEECCCCCcC
Confidence 99999999999999999999985 8999999999996 567 699999999999 9999999999753
Q ss_pred ---hHHHHHHHHh
Q 026863 205 ---SLYEIRYCCV 214 (232)
Q Consensus 205 ---~~~eIe~~~~ 214 (232)
.+++||+.++
T Consensus 150 ~~~~~~~Ie~~~~ 162 (524)
T 2z0f_A 150 NARITRAIEERAN 162 (524)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4778887653
No 10
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=99.96 E-value=7.2e-30 Score=247.85 Aligned_cols=140 Identities=18% Similarity=0.113 Sum_probs=120.9
Q ss_pred cccccccchhhHHhhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCC
Q 026863 58 KYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVS 137 (232)
Q Consensus 58 ~~~~~~~~~~m~~~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~S 137 (232)
.||...+|.+-...+..||++||||+++. .+||++++.++++|||+|+.++ + ...+|+||||+|.+
T Consensus 49 ~~~~~~~~~~~~~~r~~FGT~GiRG~~~~------~~ln~~~v~~i~~A~a~~l~~~-----~---~~~~VvVG~D~R~~ 114 (570)
T 3na5_A 49 QYYVLKPEAGNAEHAVKFGTSGHRGSAGR------HSFNEPHILAIAQAIAEERAKN-----G---ITGPCYVGKDTHAL 114 (570)
T ss_dssp HHHHCCCCTTCGGGSCCCBTTBEEECGGG------TSSSHHHHHHHHHHHHHHHHHT-----T---CCSCEEEEECSSTT
T ss_pred HHhccCCCcCCccccceecCCCceeecCC------CCCCHHHHHHHHHHHHHHHHHh-----C---CCCeEEEEeCCCcc
Confidence 47777788776777788999999999973 3899999999999999999764 2 12579999999999
Q ss_pred hHHHHHHHHHHHHHCCCeEE---EeccCChhHHHHhhhcCCCC-----CCceEEEccCCCCCCCCCCcEEEeccc-----
Q 026863 138 GPSLSVAVFAGLARAGCLVF---DMGLATTPACFMSTLLPPFA-----YDASIMVGYMYKVNNFNRIAIEFAFWI----- 204 (232)
Q Consensus 138 S~~La~Ala~gL~a~Gv~Vi---dlG~~pTP~l~yav~~~~~~-----a~gGImITASHN~~P~~~NGiK~~~~~----- 204 (232)
|+.++++++++|+++|++|+ |+|++|||+++|++. +++ +++||||||||| |++|||||++.++
T Consensus 115 S~~~~~~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~--~~~~~~~~~~~GImITASHN--P~~~NGiK~~~~~G~~~~ 190 (570)
T 3na5_A 115 SEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAIL--VHNKKGGPLADGIVITPSHN--PPEDGGIKYNPPNGGPAD 190 (570)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHH--HHHHTCSSCCEEEEECCTTC--CTTCEEEEEECTTSSCCC
T ss_pred cHHHHHHHHHHHHHCCCEEEEeCCCCccChHHHHHHHH--HhCCCccccceEEEEEeCCC--ChHHCcEEEecCCCCcCC
Confidence 99999999999999999999 579999999999996 456 899999999999 9999999998653
Q ss_pred --hHHHHHHHHhh
Q 026863 205 --SLYEIRYCCVT 215 (232)
Q Consensus 205 --~~~eIe~~~~~ 215 (232)
.+++||+.+++
T Consensus 191 ~~i~~~Ie~~~~~ 203 (570)
T 3na5_A 191 TNVTKVVEDRANA 203 (570)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 47788887653
No 11
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=99.95 E-value=3.8e-28 Score=235.28 Aligned_cols=142 Identities=14% Similarity=0.070 Sum_probs=117.7
Q ss_pred cccceeeeeeecccccccccccchhhHHhhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCC
Q 026863 43 SHSIKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRP 122 (232)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~ 122 (232)
|.++..+++....+. ....||++||||++++ .+|++.+.+++++++.++.+..
T Consensus 2 ~~~~~~~~~~~~~~~-------------~~~~FGT~GiRG~~~~-------~~t~~~~~~~~~a~~~~l~~~~------- 54 (572)
T 1kfi_A 2 QQVIPAPRVQVTQPY-------------AGQKPGTSGLRKKVSE-------ATQPNYLENFVQSIFNTLRKDE------- 54 (572)
T ss_dssp -CCBCCCEEEECCCC-------------TTCCCBTTBEEEEHHH-------HTSTTHHHHHHHHHHHHSCGGG-------
T ss_pred CccccCcccccCCcC-------------ccCCccCCccceEecc-------eecHHHHHHHHHHHHHHHhhhc-------
Confidence 445555665555442 2456999999999985 7999999999999999986421
Q ss_pred CCCC-eEEEEecCCCChHHHHHHHHHHHHHCCCeEEEe---ccCChhHHHHhhhcCCC-----CCCceEEEccCCCCCC-
Q 026863 123 VEDV-KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM---GLATTPACFMSTLLPPF-----AYDASIMVGYMYKVNN- 192 (232)
Q Consensus 123 ~~~~-~VvVGrD~R~SS~~La~Ala~gL~a~Gv~Vidl---G~~pTP~l~yav~~~~~-----~a~gGImITASHN~~P- 192 (232)
.... +|+||||+|.+|++|+++++++|+++|++|+++ |++|||+++|++. ++ +++|||||||||| |
T Consensus 55 ~~~~~~VvIG~D~R~sS~~~a~~~a~~l~a~Gi~V~~~~~~G~~pTP~l~fav~--~~n~~~~~a~~GImITASHN--P~ 130 (572)
T 1kfi_A 55 LKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIR--KVNEEVGNCIGGIILTASHN--PG 130 (572)
T ss_dssp SSSSCEEEEEECCCTTHHHHHHHHHHHHHHTTCSEEEEEGGGCBCHHHHHHHHH--HHHHHSCCEEEEEEECCTTS--CC
T ss_pred cCCCCEEEEEecCCCCHHHHHHHHHHHHHHCCCEEEEecCCCCCChHHHHHHHH--HhccccCCcceEEEEeCCCC--CC
Confidence 0124 799999999999999999999999999999999 9999999999996 67 8999999999999 8
Q ss_pred -CC--CCcEEEeccc-------hHHHHHHHHhh
Q 026863 193 -FN--RIAIEFAFWI-------SLYEIRYCCVT 215 (232)
Q Consensus 193 -~~--~NGiK~~~~~-------~~~eIe~~~~~ 215 (232)
++ ||||||+..+ .+++||+.+++
T Consensus 131 ~~~~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~ 163 (572)
T 1kfi_A 131 GKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTK 163 (572)
T ss_dssp STTTCEEEEEEECTTSSBCCHHHHHHHHHHHTT
T ss_pred CcCcccCcEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 44 9999999653 47889988865
No 12
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=99.94 E-value=7.6e-28 Score=233.19 Aligned_cols=125 Identities=14% Similarity=0.037 Sum_probs=107.8
Q ss_pred hccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHHCC
Q 026863 74 LQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAG 153 (232)
Q Consensus 74 lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a~G 153 (232)
-||++||||++++...+ .+|||+++.+|+.|++.++.. + .+|+||||+|.+|++++++++++|+++|
T Consensus 15 ~fGTsGiRG~v~~~~~~--~~~t~~f~~~l~~A~g~~~~~------g-----~~VvVG~D~R~~s~~~~~~~a~~l~a~G 81 (561)
T 3pmg_A 15 KPGTSGLRKRVKVFQSS--TNYAENFIQSIISTVEPAQRQ------E-----ATLVVGGDGRFYMKEAIQLIVRIAAANG 81 (561)
T ss_dssp CCBTTBEEEEHHHHHHS--TTHHHHHHHHHHHTSCGGGTT------T-----CEEEEEECCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCcCeeeCCCCCC--cCccHHHHHHHHHHHHhhhcC------C-----CEEEEEeCCCccHHHHHHHHHHHHHHCC
Confidence 48999999998630011 279999999999999876532 2 5899999999999999999999999999
Q ss_pred CeEEEe---ccCChhHHHHhhhcCCCCCCceEEEccCCCCCC---CCCCcEEEeccc-------hHHHHHHHHhh
Q 026863 154 CLVFDM---GLATTPACFMSTLLPPFAYDASIMVGYMYKVNN---FNRIAIEFAFWI-------SLYEIRYCCVT 215 (232)
Q Consensus 154 v~Vidl---G~~pTP~l~yav~~~~~~a~gGImITASHN~~P---~~~NGiK~~~~~-------~~~eIe~~~~~ 215 (232)
++|+++ |++|||+++|++. ++++++||||||||| | ++||||||+..+ .+++||++++.
T Consensus 82 v~V~~~~~~g~~pTP~vs~av~--~~~a~gGImITASHN--P~~~~~~nGiK~~~~~G~~~~~~~~~~Ie~~~~~ 152 (561)
T 3pmg_A 82 IGRLVIGQNGILSTPAVSCIIR--KIKAIGGIILTASHN--PGGPNGDFGIKFNISNGGPAPEAITDKIFQISKT 152 (561)
T ss_dssp CCEEEEEEEEECCHHHHHHHHH--HHTCSEEEEECCTTS--CCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCCccCHHHHHHHHH--HhcCCeEEEEEeCCC--CCCCCCcceEEEEeCCCCcCCHHHHHHHHHHHHh
Confidence 999998 8999999999996 678999999999999 8 569999998653 57889998876
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=99.30 E-value=1.4e-12 Score=125.59 Aligned_cols=71 Identities=7% Similarity=-0.077 Sum_probs=57.4
Q ss_pred cccccccchhhHHhhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCC
Q 026863 58 KYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVS 137 (232)
Q Consensus 58 ~~~~~~~~~~m~~~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~S 137 (232)
+|++..++.. ..+.+||++|+||.. +|||+++.++|.|+|. +
T Consensus 9 ~~~~~~~~~~--~~~~~fGt~G~RG~~---------~~~~~~~~~~g~a~~~-----------------r---------- 50 (544)
T 2dka_A 9 QYLPSHPKPQ--GVTFTYGTAGFRMKA---------DKLDYVTFTVGIIASL-----------------R---------- 50 (544)
T ss_dssp TTGGGCCCCS--SCCCCCBTTBEEEEG---------GGCHHHHHHHHHHHHH-----------------H----------
T ss_pred HHHHhCCCCc--CCeeEeCCCCccccc---------ccCHHHHHHHHHHHHH-----------------H----------
Confidence 3566666664 577899999999976 6999999999999965 0
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhhcCCCC-CCceEEEccCCCCCCCCCCcEEEecc
Q 026863 138 GPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFA-YDASIMVGYMYKVNNFNRIAIEFAFW 203 (232)
Q Consensus 138 S~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~~~~~~-a~gGImITASHN~~P~~~NGiK~~~~ 203 (232)
+. +++ +++||||||||| |++||||||+.+
T Consensus 51 ---------------------------------~~--~~~~~~~GImITASHN--P~~dNGiK~~~~ 80 (544)
T 2dka_A 51 ---------------------------------SK--YLQGKTVGVMITASHN--PPEDNGVKVVDP 80 (544)
T ss_dssp ---------------------------------HH--HTTTCEEEEEECCC-C--CTTEEEEEEECT
T ss_pred ---------------------------------HH--hcCCcCceEEEeCCCC--CcccCceeeecC
Confidence 22 356 889999999999 999999999976
No 14
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=97.93 E-value=9e-06 Score=78.24 Aligned_cols=48 Identities=33% Similarity=0.458 Sum_probs=45.7
Q ss_pred CCeEEEEecCCCChHHHHHHHHHHHHHC-CCeEEEeccCChhHHHHhhh
Q 026863 125 DVKVSLGKDPRVSGPSLSVAVFAGLARA-GCLVFDMGLATTPACFMSTL 172 (232)
Q Consensus 125 ~~~VvVGrD~R~SS~~La~Ala~gL~a~-Gv~VidlG~~pTP~l~yav~ 172 (232)
..+|+||||+|.+++.|.+++.+||.+. |++|.++|.++||+++|++.
T Consensus 132 ~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~G~~ttP~l~~~v~ 180 (544)
T 2dka_A 132 PANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTR 180 (544)
T ss_dssp CEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHH
T ss_pred CceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEecccccchheeeee
Confidence 3689999999999999999999999999 99999999999999999885
No 15
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=90.81 E-value=0.97 Score=37.03 Aligned_cols=61 Identities=21% Similarity=0.131 Sum_probs=45.1
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCC-----hhHHHHhhh--cCCCCCCceEEEccCC
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLAT-----TPACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~p-----TP~l~yav~--~~~~~a~gGImITASH 188 (232)
.+|+||.| ..+-.|++.+.+-|.+.|++|+|+|.-. =|.+...+. .....++-||.|-++-
T Consensus 13 ~~i~igsD--haG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 80 (155)
T 1o1x_A 13 VKIAIASD--HAAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGTG 80 (155)
T ss_dssp CEEEEEEC--STTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred eeEEEeeC--chHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCc
Confidence 57999999 5789999999999999999999999633 343333222 1134567789888764
No 16
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=89.66 E-value=0.92 Score=36.87 Aligned_cols=60 Identities=23% Similarity=0.222 Sum_probs=43.9
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCC-----hhHHHHhhh--cCCCCCCceEEEccCC
Q 026863 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLAT-----TPACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 127 ~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~p-----TP~l~yav~--~~~~~a~gGImITASH 188 (232)
+|.||.| +.+..|++.+.+-|.+.|++|+|+|.-+ =|.+...+. .....++-||.|-++-
T Consensus 3 kIaigsD--haG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 69 (149)
T 2vvr_A 3 KIAFGCD--HVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGTG 69 (149)
T ss_dssp EEEEEEC--TTGGGGHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred EEEEEeC--chhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 5899998 4788999999999999999999999633 343333222 1134567789888765
No 17
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=87.26 E-value=1.1 Score=36.93 Aligned_cols=60 Identities=23% Similarity=0.251 Sum_probs=43.4
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccC------ChhHHHHhhhc--CCCCCCceEEEccCC
Q 026863 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLA------TTPACFMSTLL--PPFAYDASIMVGYMY 188 (232)
Q Consensus 127 ~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~------pTP~l~yav~~--~~~~a~gGImITASH 188 (232)
+|.||.| +.+..|++.+.+-|.+.|++|+|+|.- .=|.+...+.. ....++-||.|-++-
T Consensus 5 kIaigsD--haG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 72 (162)
T 2vvp_A 5 RVYLGAD--HAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSG 72 (162)
T ss_dssp EEEEEEC--HHHHHHHHHHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred EEEEEeC--chhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 6999998 578999999999999999999999942 23433333220 123467788887754
No 18
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=86.77 E-value=2 Score=34.89 Aligned_cols=60 Identities=22% Similarity=0.263 Sum_probs=44.8
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCCh-----hHHHHhhh--cCCCCCCceEEEccCC
Q 026863 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 127 ~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pT-----P~l~yav~--~~~~~a~gGImITASH 188 (232)
+|.||.|. .+-.|++.+.+-|.+.|++|+|+|.-.. |.+...+. .....++-||.|-++-
T Consensus 2 kI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 68 (149)
T 3he8_A 2 KIGIGSDH--GGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 68 (149)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred EEEEEECc--hhHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 58899884 6899999999999999999999986443 54444332 1134567789988865
No 19
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=85.44 E-value=2.5 Score=35.10 Aligned_cols=61 Identities=21% Similarity=0.268 Sum_probs=45.7
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCCh-----hHHHHhhh--cCCCCCCceEEEccCC
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pT-----P~l~yav~--~~~~~a~gGImITASH 188 (232)
-+|+||.|. .+-.|++.+.+-|.+.|++|+|+|.-.. |.+...+. .....++-||.|-++-
T Consensus 21 MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 88 (169)
T 3ph3_A 21 MKIGIGSDH--GGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 88 (169)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred CEEEEEeCc--hHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 479999995 6788999999999999999999986443 54444332 1134567789988865
No 20
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=85.18 E-value=2.2 Score=35.24 Aligned_cols=62 Identities=21% Similarity=0.216 Sum_probs=44.4
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCCh-----hHHHHhhh--cCCCCCCceEEEccCCC
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTL--LPPFAYDASIMVGYMYK 189 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pT-----P~l~yav~--~~~~~a~gGImITASHN 189 (232)
-+|+||.|. .+-.|++.+.+-|.+.|++|+|+|.-.. |.+...+. .....++-||.|-++-+
T Consensus 22 MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTGi 90 (166)
T 3s5p_A 22 MKVAFASDH--GGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTGI 90 (166)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSSH
T ss_pred eEEEEEECc--hHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCcH
Confidence 579999995 6899999999999999999999986443 33322221 11345778999888653
No 21
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=82.41 E-value=4.2 Score=32.96 Aligned_cols=62 Identities=23% Similarity=0.250 Sum_probs=45.6
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCCh------hHHHHhhhcCCCCCCceEEEccCCC
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT------PACFMSTLLPPFAYDASIMVGYMYK 189 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pT------P~l~yav~~~~~~a~gGImITASHN 189 (232)
.+|+||.|. .+-.|++.+.+-|.+.|++|+|+|.-.+ |.+...+...-..++-||.|-++-+
T Consensus 8 mkI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~~d~GIliCGTGi 75 (148)
T 4em8_A 8 KRVFLSSDH--AGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVSDTSFGVLICGTGI 75 (148)
T ss_dssp SEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCBTTBEEEEEESSSH
T ss_pred eEEEEEECc--hhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCeEEEEccCcH
Confidence 479999994 6899999999999999999999986322 4444443311115677899888763
No 22
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=75.77 E-value=5.2 Score=34.36 Aligned_cols=62 Identities=13% Similarity=0.073 Sum_probs=42.8
Q ss_pred CeEEEEecCCCChH---HHHHHHHHHHHHCCCeEEEeccCC--------hhHHHHhhh--cCCCCCCceEEEccCC
Q 026863 126 VKVSLGKDPRVSGP---SLSVAVFAGLARAGCLVFDMGLAT--------TPACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 126 ~~VvVGrD~R~SS~---~La~Ala~gL~a~Gv~VidlG~~p--------TP~l~yav~--~~~~~a~gGImITASH 188 (232)
-+|.||.|.- ... .+++.+.+-|.+.|++|+|+|.-. =|.+...+. .....++-||.|-++-
T Consensus 4 MkIaIgsDha-~~lKn~ilk~~i~~~L~~~G~eV~D~G~~s~~d~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTG 78 (216)
T 2ppw_A 4 MKIALINENS-QASKNHIIYDSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTG 78 (216)
T ss_dssp CEEEECCCTT-TGGGHHHHHHHHHHHHHHHTCEEEECSCCSCTTCCCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred cEEEEEcCCh-HhhhhhhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCc
Confidence 4799999988 432 366999999999999999999653 233322221 1134567788888765
No 23
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=75.37 E-value=5 Score=33.52 Aligned_cols=61 Identities=10% Similarity=0.064 Sum_probs=45.4
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHH--CCCeEEEeccCC-----hhHHHHhhh--cCCCCCCceEEEccCCC
Q 026863 127 KVSLGKDPRVSGPSLSVAVFAGLAR--AGCLVFDMGLAT-----TPACFMSTL--LPPFAYDASIMVGYMYK 189 (232)
Q Consensus 127 ~VvVGrD~R~SS~~La~Ala~gL~a--~Gv~VidlG~~p-----TP~l~yav~--~~~~~a~gGImITASHN 189 (232)
+|+||.|. .+-.|++.+.+-|.+ .|++|+|+|.-. =|.+...+. .....++-||.|-++-+
T Consensus 24 kIaIgsDh--aG~~lK~~i~~~L~~~~~G~eV~D~G~~s~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTGi 93 (179)
T 3k7p_A 24 RVAIGTDH--PAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLAAGSGI 93 (179)
T ss_dssp EEEEEECT--GGGGGHHHHHHHHHHTCTTEEEEECSCSSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSSH
T ss_pred EEEEEECc--hHHHHHHHHHHHHHhcCCCCeEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEccCcH
Confidence 69999995 678999999999999 999999998643 355444332 11345778999888653
No 24
>2ehp_A AQ_1627 protein; putative protein, NPPSFA, national project protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eiu_A
Probab=70.20 E-value=14 Score=28.52 Aligned_cols=55 Identities=18% Similarity=0.055 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEe
Q 026863 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM 159 (232)
Q Consensus 94 ~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~Vidl 159 (232)
.||.++..|+|.|++..+.-..+ ....+++--|.. -+..|+.-|++-.|-+|+..
T Consensus 19 PLTaENL~R~GLALCtLl~iek~-------~eeP~l~i~elN----FltmalsVGFM~gGG~V~vg 73 (126)
T 2ehp_A 19 PLTAENLFRIGLALCTLWILDKE-------IEEPTLSIPETN----FVTLALSVGFMNAGGSVNVG 73 (126)
T ss_dssp TSSHHHHHHHHHHHHHHHHHTTC-------CSSCEEEESSCS----HHHHHHHHHHHHTTCEEEES
T ss_pred cccHHHHHHHHHHHHHHHHHHhh-------hcCCeeeecccc----eeeeeeeeeEeccCcceEee
Confidence 79999999999999998875421 124466656654 46677788999999999854
No 25
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=68.30 E-value=7.8 Score=32.48 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=45.5
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCC--CeEEEeccC------ChhHHHHhhh--cCCCCCCceEEEccCC
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAG--CLVFDMGLA------TTPACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~G--v~VidlG~~------pTP~l~yav~--~~~~~a~gGImITASH 188 (232)
-+|+||.|. .+-.|++.+.+-|.+.| ++|+|+|.- .=|.+...+. .....++-||.|-++-
T Consensus 30 MkIaIgsDH--aG~~LK~~i~~~L~~~G~g~eV~D~G~~s~~e~~DYPd~a~~vA~~V~~ge~d~GIliCGTG 100 (184)
T 3sgw_A 30 LRLAIACDD--AGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMICGTG 100 (184)
T ss_dssp EEEEEEECG--GGHHHHHHHHHHHTTCTTEEEEEECSCCSTTCCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred cEEEEEECc--hhHHHHHHHHHHHHhCCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 469999994 68999999999999999 799999975 2344443322 1134577899988865
No 26
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=63.11 E-value=8.4 Score=33.00 Aligned_cols=61 Identities=16% Similarity=0.051 Sum_probs=42.9
Q ss_pred CeEEEEecCCCChHHHHH-----HHHHHHHHCCCeEEEecc--C-----ChhHHHHhhh--cCCCCCCceEEEccCCC
Q 026863 126 VKVSLGKDPRVSGPSLSV-----AVFAGLARAGCLVFDMGL--A-----TTPACFMSTL--LPPFAYDASIMVGYMYK 189 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~-----Ala~gL~a~Gv~VidlG~--~-----pTP~l~yav~--~~~~~a~gGImITASHN 189 (232)
-+|+||.|.- ..++. .+.+-|.+.|++|+|+|. - .=|.+...+. .....++-||.|-++-+
T Consensus 4 MkIaigsDha---~~lK~~~i~~~l~~~L~~~G~eV~D~G~~~~~~~~~dYpd~a~~vA~~V~~g~~d~GIliCGTGi 78 (214)
T 3ono_A 4 MKIALMMENS---QAAKNAMVAGELNSVAGGLGHDVFNVGMTDENDHHLTYIHLGIMASILLNSKAVDFVVTGCGTGQ 78 (214)
T ss_dssp CEEEECCCGG---GGGGHHHHHHHHHHHHHHTTCEEEECSCSSTTSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSH
T ss_pred cEEEEECCCc---HHHHChhHHHHHHHHHHHCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCcH
Confidence 4799999986 56666 999999999999999994 2 2234333221 11345677899888763
No 27
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=62.77 E-value=30 Score=25.98 Aligned_cols=85 Identities=11% Similarity=-0.037 Sum_probs=51.4
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhhcCCCC---CCceEEEccCCCCC-----CCCCCcE
Q 026863 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFA---YDASIMVGYMYKVN-----NFNRIAI 198 (232)
Q Consensus 127 ~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~~~~~~---a~gGImITASHN~~-----P~~~NGi 198 (232)
+|++.. ..............|...|++|+.... .+ .. |.+ .|+-+.+++|.|-. .-..+++
T Consensus 57 ril~~~--~~~~~~~~~~~~~~L~~~gv~v~~~~~--~~-----~~--H~K~~iiD~~~~~iGS~N~~~~~~~~n~E~~~ 125 (155)
T 1byr_A 57 KIVIDE--RGNTGRASIAAMNYIANSGIPLRTDSN--FP-----IQ--HDKVIIVDNVTVETGSFNFTKAAETKNSENAV 125 (155)
T ss_dssp EEEEES--TTCCSHHHHHHHHHHHHTTCCEEEECS--SS-----CC--CCCEEEETTTEEEEESCCBSHHHHHTSCEEEE
T ss_pred EEEEeC--ccccccccHHHHHHHHHCCCeEEEcCC--cc-----cc--cceEEEECCCEEEEECCCCCccccccCcccEE
Confidence 445544 333223345567778899999987632 11 11 333 36668889998833 1244778
Q ss_pred EEecc-chHHHHHHHHhh--cCCCccc
Q 026863 199 EFAFW-ISLYEIRYCCVT--DDCFSLT 222 (232)
Q Consensus 199 K~~~~-~~~~eIe~~~~~--e~~~~~~ 222 (232)
.+... +..+++++.|+. +++.+++
T Consensus 126 ~i~~~~~l~~~~~~~f~~~w~~~~~~~ 152 (155)
T 1byr_A 126 VIWNMPKLAESFLEHWQDRWNQGRDYR 152 (155)
T ss_dssp EEESCHHHHHHHHHHHHHHHHTCEECC
T ss_pred EEcCcHHHHHHHHHHHHHHHHhCCCCC
Confidence 88763 677888888877 4455554
No 28
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=56.32 E-value=56 Score=29.79 Aligned_cols=52 Identities=10% Similarity=-0.015 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCC-ChHHHHHHHHHHHHHCCCeEEE
Q 026863 99 AVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRV-SGPSLSVAVFAGLARAGCLVFD 158 (232)
Q Consensus 99 ~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~-SS~~La~Ala~gL~a~Gv~Vid 158 (232)
...++-..+-+|-.... .+.+|+|-|++.. +.++++++++++|.+.|+++..
T Consensus 247 ~~~~ii~~Y~~w~~~~~--------~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 247 DPQRLLNHYVSVAKGDP--------KKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp CHHHHHHHHHHHHHTCC--------CTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhhcccc--------cccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 35666667777654321 2458999999986 5678999999999999999874
No 29
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=56.03 E-value=27 Score=28.40 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=38.8
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHCCCeEEEecc-CChhHHHHhhhcCCCCCCceEEEccCC
Q 026863 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMSTLLPPFAYDASIMVGYMY 188 (232)
Q Consensus 125 ~~~VvVGr---D~R~SS~~La~Ala~gL~a~Gv~VidlG~-~pTP~l~yav~~~~~~a~gGImITASH 188 (232)
+++|+++. |.+.-| +..++..|...|++|+++|. +|...+.-++. ..+.+ .|.++++.
T Consensus 88 ~~~vll~~~~gd~H~iG---~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~--~~~~d-~v~lS~~~ 149 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIG---KNLVAMMLESGGFTVYNLGVDIEPGKFVEAVK--KYQPD-IVGMSALL 149 (210)
T ss_dssp CCEEEEEEBTTCCCCHH---HHHHHHHHHHTTCEEEECCSSBCHHHHHHHHH--HHCCS-EEEEECCS
T ss_pred CCEEEEEeCCCcccHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH--HcCCC-EEEEeccc
Confidence 35788886 444444 44567788899999999995 66666655553 34444 47777753
No 30
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.83 E-value=32 Score=27.21 Aligned_cols=57 Identities=30% Similarity=0.294 Sum_probs=37.1
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHCCCeEEEecc-CChhHHHHhhhcCCCCCCceEEEccC
Q 026863 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMSTLLPPFAYDASIMVGYM 187 (232)
Q Consensus 125 ~~~VvVGr---D~R~SS~~La~Ala~gL~a~Gv~VidlG~-~pTP~l~yav~~~~~~a~gGImITAS 187 (232)
+++|+++. |.+.-+..+ ++..|...|++|+++|. +|...+.-++. ..+++ -|.++++
T Consensus 18 ~~~vlla~~~gd~HdiG~~~---va~~l~~~G~eVi~lG~~~p~e~lv~aa~--~~~~d-iV~lS~~ 78 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKV---VARALRDAGFEVVYTGLRQTPEQVAMAAV--QEDVD-VIGVSIL 78 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHH---HHHHHHHTTCEEECCCSBCCHHHHHHHHH--HTTCS-EEEEEES
T ss_pred CCEEEEEeCCCCccHHHHHH---HHHHHHHCCCEEEECCCCCCHHHHHHHHH--hcCCC-EEEEEee
Confidence 46787775 777766555 45678899999999986 55555554443 34544 3555554
No 31
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=50.69 E-value=31 Score=29.33 Aligned_cols=57 Identities=18% Similarity=0.026 Sum_probs=37.3
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHCCCeEEEecc-CChhHHHHhhhcCCCCCCceEEEccC
Q 026863 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMSTLLPPFAYDASIMVGYM 187 (232)
Q Consensus 125 ~~~VvVGr---D~R~SS~~La~Ala~gL~a~Gv~VidlG~-~pTP~l~yav~~~~~~a~gGImITAS 187 (232)
.++|+++. |.+.-| +..++..|...|++|+++|. +|...+.-++. ..+.+ .|.++++
T Consensus 123 ~~~vlla~~~gd~HdiG---~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~--~~~~d-~V~lS~l 183 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIG---KNIVTALLRANGYNVVDLGRDVPAEEVLAAVQ--KEKPI-MLTGTAL 183 (258)
T ss_dssp SCEEEEEECTTCCCCHH---HHHHHHHHHHTTCEEEEEEEECCSHHHHHHHH--HHCCS-EEEEECC
T ss_pred CCeEEEEeCCCCccHHH---HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH--HcCCC-EEEEEee
Confidence 46788886 444444 44566778999999999984 66666655553 33443 4666664
No 32
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=50.57 E-value=1.1e+02 Score=25.33 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=37.6
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHCCCeEEEecc-CChhHHHHhhhcCCCCCCceEEE
Q 026863 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMSTLLPPFAYDASIMV 184 (232)
Q Consensus 125 ~~~VvVGr---D~R~SS~~La~Ala~gL~a~Gv~VidlG~-~pTP~l~yav~~~~~~a~gGImI 184 (232)
.++|+++. |.+.-|..+ +...|...|++|+|+|. +|...+--++. ..+.+ -|.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~i---v~~~l~~~G~~Vi~LG~~vp~e~iv~~~~--~~~~d-~v~l 149 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRL---VTTMLGANGFQIVDLGVDVLNENVVEEAA--KHKGE-KVLL 149 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHH---HHHHHHHTSCEEEECCSSCCHHHHHHHHH--HTTTS-CEEE
T ss_pred CCeEEEEeCCCChhHHHHHH---HHHHHHHCCCeEEEcCCCCCHHHHHHHHH--HcCCC-EEEE
Confidence 46898886 766666655 56678999999999996 56666644443 34444 3777
No 33
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=44.56 E-value=51 Score=25.59 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=30.5
Q ss_pred CeEEEEecCCC-ChHHHHHHHHHHHHHCCCeEEEeccC
Q 026863 126 VKVSLGKDPRV-SGPSLSVAVFAGLARAGCLVFDMGLA 162 (232)
Q Consensus 126 ~~VvVGrD~R~-SS~~La~Ala~gL~a~Gv~VidlG~~ 162 (232)
.+|+|-|++.. +.+.++++++++|...|++|..+.+.
T Consensus 5 ~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 57889999884 78999999999999999887655443
No 34
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=43.20 E-value=17 Score=31.40 Aligned_cols=62 Identities=15% Similarity=-0.014 Sum_probs=42.8
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCC--------hhHHHHhhh--cCCCCCCceEEEccCC
Q 026863 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLAT--------TPACFMSTL--LPPFAYDASIMVGYMY 188 (232)
Q Consensus 127 ~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~p--------TP~l~yav~--~~~~~a~gGImITASH 188 (232)
.|+++.|.-.....|++.+.+-|.+.|++|+|+|.-. =|.+...+. .....++-||.|-++-
T Consensus 23 ali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGTG 94 (231)
T 3c5y_A 23 ALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTG 94 (231)
T ss_dssp EECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSS
T ss_pred EEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCc
Confidence 4556666555566999999999999999999999643 244433322 0123567788888765
No 35
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=41.80 E-value=1.4e+02 Score=24.16 Aligned_cols=90 Identities=14% Similarity=-0.056 Sum_probs=62.7
Q ss_pred eEEEEec------CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhhc-----CCCCCCceEEEccCCCCCCCCC
Q 026863 127 KVSLGKD------PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLL-----PPFAYDASIMVGYMYKVNNFNR 195 (232)
Q Consensus 127 ~VvVGrD------~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~~-----~~~~a~gGImITASHN~~P~~~ 195 (232)
-++|+.. .|..+..=++++...|...|++|....-.+.-.+.-++.. .+..+++.+++=+||- -.
T Consensus 46 ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~~~~d~~~~d~~v~~~lsHG--~~-- 121 (178)
T 2h54_A 46 ALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHG--IR-- 121 (178)
T ss_dssp EEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTCGGGGGCSCEEEEEESCB--CS--
T ss_pred EEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhhhhcCCCCEEEEEEecCC--CC--
Confidence 4678876 6788899999999999999999997755555555543320 1235678888889996 32
Q ss_pred CcEEEeccc---------hHHHHHHHHhhcCCCccc
Q 026863 196 IAIEFAFWI---------SLYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 196 NGiK~~~~~---------~~~eIe~~~~~e~~~~~~ 222 (232)
++ ++..+ ...+|-+.|....|.+|-
T Consensus 122 g~--i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~ 155 (178)
T 2h54_A 122 EG--ICGKKHSEQVPDILQLNAIFNMLNTKNCPSLK 155 (178)
T ss_dssp SC--EECTTCCSSSCCEECHHHHHHHHSTTTCGGGT
T ss_pred Ce--EEeecCCcccCcEEEHHHHHHHHhhcCChhhc
Confidence 11 22221 357888888888888764
No 36
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=41.44 E-value=28 Score=26.69 Aligned_cols=56 Identities=21% Similarity=0.320 Sum_probs=34.6
Q ss_pred CeEEEEe---cCCCChHHHHHHHHHHHHHCCCeEEEecc-CChhHHHHhhhcCCCCCCceEEEccC
Q 026863 126 VKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMSTLLPPFAYDASIMVGYM 187 (232)
Q Consensus 126 ~~VvVGr---D~R~SS~~La~Ala~gL~a~Gv~VidlG~-~pTP~l~yav~~~~~~a~gGImITAS 187 (232)
++|+++. |.+.-+.. .+...|...|++|+++|. +|...+.-++. ..+++. |.++++
T Consensus 4 ~~vvla~~~~d~HdiG~~---~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~--~~~~d~-v~lS~~ 63 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGNK---ILDHAFTNAGFNVVNIGVLSPQELFIKAAI--ETKADA-ILVSSL 63 (137)
T ss_dssp CEEEEEEETTCCCCHHHH---HHHHHHHHTTCEEEEEEEEECHHHHHHHHH--HHTCSE-EEEEEC
T ss_pred CEEEEEeCCCchhHHHHH---HHHHHHHHCCCEEEECCCCCCHHHHHHHHH--hcCCCE-EEEEec
Confidence 4666654 65555544 456788999999999985 55555554543 334443 444443
No 37
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=39.33 E-value=1.5e+02 Score=24.95 Aligned_cols=90 Identities=13% Similarity=-0.057 Sum_probs=61.0
Q ss_pred eEEEEe---------cCCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhh---cC-CCCCCceEEEccCCCCCCC
Q 026863 127 KVSLGK---------DPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTL---LP-PFAYDASIMVGYMYKVNNF 193 (232)
Q Consensus 127 ~VvVGr---------D~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~---~~-~~~a~gGImITASHN~~P~ 193 (232)
-++|+. ..|..+..=++++...|...|++|....-.+.-.+.-++. .+ +..+++.|++=+||- -
T Consensus 19 aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~~~~~d~~v~~~lsHG--~- 95 (250)
T 2j32_A 19 CIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHG--E- 95 (250)
T ss_dssp EEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCE--E-
T ss_pred EEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhhccCCCEEEEEECCCC--C-
Confidence 367775 3677888889999999999999999765455555433321 11 245788999999996 3
Q ss_pred CCCcEEEeccc---hHHHHHHHHhhcCCCccc
Q 026863 194 NRIAIEFAFWI---SLYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 194 ~~NGiK~~~~~---~~~eIe~~~~~e~~~~~~ 222 (232)
+|. ++..+ ..++|-+.|..+.|.+|-
T Consensus 96 --~g~-i~~~D~~v~l~~i~~~f~~~~cp~L~ 124 (250)
T 2j32_A 96 --EGI-IFGTNGPVDLKKITNFFRGDRCRSLT 124 (250)
T ss_dssp --TTE-EEETTEEEEHHHHHHTTSTTTCGGGT
T ss_pred --CCe-EEecCCcEEHHHHHHHhccccChhHc
Confidence 342 22333 256777777777788764
No 38
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=38.24 E-value=1.3e+02 Score=23.36 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEe-ccCChh
Q 026863 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (232)
Q Consensus 94 ~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~Vidl-G~~pTP 165 (232)
.-||..+...++.+++...+. |. ..-.|.| +..- .+ .++++.+|...|++|..+ ..+|.|
T Consensus 55 k~tp~AA~~aa~~~~~~~~~~-----Gi--~~v~V~v-kG~G-~G---re~airaL~~~Gl~I~~I~DvTpiP 115 (129)
T 2vqe_K 55 KGTPYAAQLAALDAAKKAMAY-----GM--QSVDVIV-RGTG-AG---REQAIRALQASGLQVKSIVDDTPVP 115 (129)
T ss_dssp GGSHHHHHHHHHHHHHHHHTT-----TC--CEEEEEE-ESCC-TT---HHHHHHHHHTSSSEEEECEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHh-----CC--eEEEEEE-ECCC-CC---HHHHHHHHHHCCCEEEEEEEcCCCC
Confidence 678999999999999987764 31 1122333 3332 23 347789999999999876 566655
No 39
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=33.52 E-value=1.8e+02 Score=24.91 Aligned_cols=83 Identities=13% Similarity=-0.072 Sum_probs=54.8
Q ss_pred CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhh----cCCCCCCceEEEccCCCCCCCCCCcEEEeccc----h
Q 026863 134 PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTL----LPPFAYDASIMVGYMYKVNNFNRIAIEFAFWI----S 205 (232)
Q Consensus 134 ~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~----~~~~~a~gGImITASHN~~P~~~NGiK~~~~~----~ 205 (232)
.|..+..=++++...|...|++|....-.+.-.+.-.+. ..+..+++.|++=.||- -. |+| +..+ .
T Consensus 43 ~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~~h~~~d~~v~~ilSHG--~~--g~i--~g~D~~~v~ 116 (271)
T 3h11_B 43 DRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLMDHSNMDCFICCILSHG--DK--GII--YGTDGQEAP 116 (271)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSCCTTCSCEEEEEESCE--ET--TEE--ECTTSCEEE
T ss_pred CCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEcCC--cC--CEE--EecCCCeec
Confidence 577788888899999999999998664444444332221 12345788898899995 32 222 2222 2
Q ss_pred HHHHHHHHhhcCCCccc
Q 026863 206 LYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 206 ~~eIe~~~~~e~~~~~~ 222 (232)
.++|-+.|....|++|-
T Consensus 117 l~~I~~~f~~~~CpsL~ 133 (271)
T 3h11_B 117 IYELTSQFTGLKCPSLA 133 (271)
T ss_dssp HHHHHGGGSTTTCGGGT
T ss_pred HHHHHHHhhhccChhhc
Confidence 57888888888898763
No 40
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=32.09 E-value=76 Score=30.70 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=37.3
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHHCCCeEEEecc-CChhHHHHhhhcCCCCCCceEEEccC
Q 026863 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMSTLLPPFAYDASIMVGYM 187 (232)
Q Consensus 125 ~~~VvVGr---D~R~SS~~La~Ala~gL~a~Gv~VidlG~-~pTP~l~yav~~~~~~a~gGImITAS 187 (232)
.++|+++. |.+.-|. ..++..|..+|++|+++|. +|...+--++. ..+.+ .|.++++
T Consensus 98 ~~kVLlatv~GD~HdiG~---~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~--~~~~d-iVgLS~l 158 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGK---NIVGVVLQCNNYEIVDLGVMVPAEKILRTAK--EVNAD-LIGLSGL 158 (579)
T ss_dssp SCEEEEEEBTTCCCCHHH---HHHHHHHHTTTCEEEECCSSBCHHHHHHHHH--HHTCS-EEEEECC
T ss_pred CCeEEEEECCCCCchHHH---HHHHHHHHHCCCEEEECCCCCCHHHHHHHHH--HcCCC-EEEEEec
Confidence 46888886 6655554 4456688999999999995 56556555543 23333 3555554
No 41
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=30.21 E-value=1.3e+02 Score=26.30 Aligned_cols=90 Identities=14% Similarity=-0.060 Sum_probs=62.6
Q ss_pred eEEEEec------CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhh-----cCCCCCCceEEEccCCCCCCCCC
Q 026863 127 KVSLGKD------PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTL-----LPPFAYDASIMVGYMYKVNNFNR 195 (232)
Q Consensus 127 ~VvVGrD------~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~-----~~~~~a~gGImITASHN~~P~~~ 195 (232)
-+||+.. .|..+..=++++...|...|++|....-.+.-.+.-++. ..+.++++.|++=+||- -.
T Consensus 63 aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~~~dh~~~d~~vv~~lsHG--~~-- 138 (302)
T 3e4c_A 63 ALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHG--IR-- 138 (302)
T ss_dssp EEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTCGGGGGCSCEEEEEEEEE--ET--
T ss_pred EEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHhhhccCCCCEEEEEEeccC--cC--
Confidence 4788877 678888889999999999999999775555555543332 01234788899999995 22
Q ss_pred CcEEEeccc---------hHHHHHHHHhhcCCCccc
Q 026863 196 IAIEFAFWI---------SLYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 196 NGiK~~~~~---------~~~eIe~~~~~e~~~~~~ 222 (232)
++ ++..+ ..++|-+.|..+.|.+|-
T Consensus 139 ~~--i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~ 172 (302)
T 3e4c_A 139 EG--ICGKKHSEQVPDILQLNAIFNMLNTKNCPSLK 172 (302)
T ss_dssp TE--EECTTCCSSSCCEECHHHHHHHTSTTTCGGGT
T ss_pred Ce--EEeecccccCCcEEEHHHHHHHHhhhcchhhc
Confidence 22 22221 268888888888898764
No 42
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=29.76 E-value=1.9e+02 Score=23.10 Aligned_cols=83 Identities=16% Similarity=-0.027 Sum_probs=56.8
Q ss_pred CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHH-----HhhhcCCCCCCceEEEccCCCCCCCCCCcEEEeccc----
Q 026863 134 PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACF-----MSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFWI---- 204 (232)
Q Consensus 134 ~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~-----yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~~---- 204 (232)
.|..+..=++.+...|...|++|....-.+.-.+. ++-...+..+++.|++-.||- .. |. ++..+
T Consensus 52 ~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~dc~vv~ilSHG--~~---g~-i~g~D~~~v 125 (167)
T 1pyo_A 52 FRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCIVALLSHG--VE---GA-IYGVDGKLL 125 (167)
T ss_dssp CCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHTCGGGGTSSEEEEEEESCE--ET---TE-EECTTSCEE
T ss_pred cCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhhhhhccCCCEEEEEeCCCC--CC---Ce-EEEeCCCEE
Confidence 47788888999999999999999876544444443 222112345788899999996 32 32 22222
Q ss_pred hHHHHHHHHhhcCCCccc
Q 026863 205 SLYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 205 ~~~eIe~~~~~e~~~~~~ 222 (232)
..++|-..|..+.|++|-
T Consensus 126 ~l~~i~~~F~~~~CpsL~ 143 (167)
T 1pyo_A 126 QLQEVFQLFDNANCPSLQ 143 (167)
T ss_dssp EHHHHHHHTSTTTCGGGT
T ss_pred cHHHHHHHhcccCChhHc
Confidence 357888888888898764
No 43
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=27.30 E-value=1.5e+02 Score=21.50 Aligned_cols=53 Identities=9% Similarity=-0.017 Sum_probs=31.3
Q ss_pred EEEecCC-CChHHHHHHHHHHHHHCCCeEE--EeccCChhHHHHhhhcCCCCCCceEEEccCCC
Q 026863 129 SLGKDPR-VSGPSLSVAVFAGLARAGCLVF--DMGLATTPACFMSTLLPPFAYDASIMVGYMYK 189 (232)
Q Consensus 129 vVGrD~R-~SS~~La~Ala~gL~a~Gv~Vi--dlG~~pTP~l~yav~~~~~~a~gGImITASHN 189 (232)
+|-+.+. -+.+.++++++++|.+.|++|- ++.-.....+ ..++.=|+.+..++
T Consensus 2 ~I~Y~S~tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~~~~l--------~~~d~iiig~pty~ 57 (138)
T 5nul_A 2 KIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDEL--------LNEDILILGCSAMT 57 (138)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHHTTCCCEEEEGGGCCHHHH--------TTCSEEEEEECCBT
T ss_pred EEEEECCCchHHHHHHHHHHHHHHCCCeEEEEEhhhCCHHHH--------hhCCEEEEEcCccC
Confidence 4445554 3678889999999998886654 4433322211 23555555666555
No 44
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=26.80 E-value=1e+02 Score=23.65 Aligned_cols=32 Identities=28% Similarity=0.219 Sum_probs=24.2
Q ss_pred EEEEecCC-CChHHHHHHHHHHHHHCCCeEEEe
Q 026863 128 VSLGKDPR-VSGPSLSVAVFAGLARAGCLVFDM 159 (232)
Q Consensus 128 VvVGrD~R-~SS~~La~Ala~gL~a~Gv~Vidl 159 (232)
|+|-+.+. -+.+.++++++++|.+.|++|..+
T Consensus 3 v~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~ 35 (161)
T 3hly_A 3 VLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMV 35 (161)
T ss_dssp EEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCChHHHHHHHHHHHHHHhCCCeEEEE
Confidence 66666666 478889999999998888776443
No 45
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=26.31 E-value=89 Score=22.72 Aligned_cols=41 Identities=10% Similarity=-0.015 Sum_probs=31.7
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCChhH
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPA 166 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~ 166 (232)
++|+|+-|....+....+.++.-....|.++..+.+.+.+.
T Consensus 7 ~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~ 47 (150)
T 3tnj_A 7 HHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIP 47 (150)
T ss_dssp SEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC---
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEcCcc
Confidence 68999999999998888887777777799888776655443
No 46
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=24.92 E-value=3.3e+02 Score=23.43 Aligned_cols=100 Identities=15% Similarity=0.126 Sum_probs=59.1
Q ss_pred ceeeeeeecccccccccccchhhHHhhhhccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 026863 46 IKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVED 125 (232)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~m~~~~~lFg~sGIRGi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~ 125 (232)
.+-.-+-.-.|.+ +.-+..+.+.++-+..=..|+.|++--|..|+...||.+.-.++.+...+.... +
T Consensus 14 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-----------r 81 (306)
T 1o5k_A 14 FRGVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-----------K 81 (306)
T ss_dssp CSEEEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-----------S
T ss_pred cCCeeeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-----------C
Confidence 3334444455555 443444434443333345688888776766666789999888887777665431 2
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEe
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM 159 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~Vidl 159 (232)
..|++|-=.-...+ +..+++-..+.|++.+.+
T Consensus 82 vpViaGvg~~st~~--ai~la~~A~~~Gadavlv 113 (306)
T 1o5k_A 82 IPVIVGAGTNSTEK--TLKLVKQAEKLGANGVLV 113 (306)
T ss_dssp SCEEEECCCSCHHH--HHHHHHHHHHHTCSEEEE
T ss_pred CeEEEcCCCccHHH--HHHHHHHHHhcCCCEEEE
Confidence 45777754333333 233456667788887754
No 47
>4edg_A DNA primase; catalytic domain, nucleoside triphosphate, nucleoside polyph protein-ligand complex, transferase; HET: DNA ATP; 2.00A {Staphylococcus aureus} PDB: 4e2k_A* 4edk_A* 4edr_A* 4edt_A* 4edv_A* 4ee1_A*
Probab=24.17 E-value=1.4e+02 Score=26.50 Aligned_cols=72 Identities=21% Similarity=0.250 Sum_probs=49.8
Q ss_pred ccchhhHHhhhhcccccee-eeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHH
Q 026863 63 VVDEEMDRIRRLQNGSDVR-GVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSL 141 (232)
Q Consensus 63 ~~~~~m~~~~~lFg~sGIR-Gi~~~g~~~~~~~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~L 141 (232)
+.+-.||.+.-.. .|+. .+..-| ..+|++.+..|-. . . ..|++.+|.-..|...
T Consensus 157 vvEG~~Dvial~q--~Gi~naVA~lG-----Talt~~~~~~L~r--------~-----~-----~~Vil~~D~D~AG~~A 211 (329)
T 4edg_A 157 LLEGFMDVIKSDT--AGLKNVVATMG-----TQLSDEHITFIRK--------L-----T-----SNITLMFDGDFAGSEA 211 (329)
T ss_dssp EESCHHHHHHHHH--HTCCSEEECSS-----SCCCHHHHHHHHH--------H-----C-----SEEEECCCSSHHHHHH
T ss_pred EEecHHHHHHHHH--cCCCeEEECCc-----cCCCHHHHHHHHh--------c-----C-----CeEEEEeCCCHHHHHH
Confidence 3555667664322 4666 333222 3789887765432 1 1 4699999999999999
Q ss_pred HHHHHHHHHHCCCeEEEe
Q 026863 142 SVAVFAGLARAGCLVFDM 159 (232)
Q Consensus 142 a~Ala~gL~a~Gv~Vidl 159 (232)
+.-++..|...|++|..+
T Consensus 212 a~r~~~~l~~~g~~v~v~ 229 (329)
T 4edg_A 212 TLKTGQHLLQQGLNVFVI 229 (329)
T ss_dssp HHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHhcCCeEEEE
Confidence 999999999999988754
No 48
>3u5c_O RP59A, 40S ribosomal protein S14-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_K 3o30_H 3o2z_H 3u5g_O 1s1h_K 3jyv_K*
Probab=24.17 E-value=1e+02 Score=24.32 Aligned_cols=64 Identities=22% Similarity=0.313 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEE----ecCCCChHHHHHHHHHHHHHCCCeEEEe-ccCChh
Q 026863 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLG----KDPRVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (232)
Q Consensus 94 ~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVG----rD~R~SS~~La~Ala~gL~a~Gv~Vidl-G~~pTP 165 (232)
.-||..+...++.+++...+. |. ..-.|.|- .-+.--++ =.++++.+|...|++|..+ ..+|.|
T Consensus 54 ksTpyAAq~aa~~~a~~a~e~-----Gi--~~v~V~vra~gg~~~kgpG~-Gr~sairaL~~~Gl~I~~I~DvTpiP 122 (137)
T 3u5c_O 54 ESSPYAAMLAAQDVAAKCKEV-----GI--TAVHVKIRATGGTRTKTPGP-GGQAALRALARSGLRIGRIEDVTPVP 122 (137)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH-----TC--CEEECEEECSCTTSCCSCCG-GGHHHHHHHHTTTCEECCCEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHc-----CC--eEEEEEEeccCCCcccCCCc-chHHHHHHHHhCCCEEEEEEEcCCCC
Confidence 578999999999999887665 31 12334441 11111222 2566788999999999866 566666
No 49
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=23.06 E-value=89 Score=22.42 Aligned_cols=39 Identities=5% Similarity=-0.128 Sum_probs=30.9
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccC-Ch
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLA-TT 164 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~-pT 164 (232)
.+|+|+-|....+....+..+.-....|.++..+.+. +.
T Consensus 5 ~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~ 44 (138)
T 1q77_A 5 KVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVLEDV 44 (138)
T ss_dssp EEEEEEESTTCCCHHHHHHHHHHHTTTCCEEEEEEECHHH
T ss_pred cEEEEEccCCHhHHHHHHHHHHHHHHcCCeEEEEEEeccc
Confidence 5799999999888877776666666679999888776 54
No 50
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=22.62 E-value=2.2e+02 Score=21.65 Aligned_cols=60 Identities=23% Similarity=0.339 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEe-ccCChh
Q 026863 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (232)
Q Consensus 94 ~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~Vidl-G~~pTP 165 (232)
.-||..++..++.+++...+. |. ..-.|.| +..-+. .++++.+|...|++|..+ ..+|.|
T Consensus 45 k~tp~AA~~aa~~~~~~~~~~-----Gi--~~v~v~v-kG~G~G----r~~airaL~~~Gl~I~~I~DvTpip 105 (117)
T 3r8n_K 45 KSTPFAAQVAAERCADAVKEY-----GI--KNLEVMV-KGPGPG----RESTIRALNAAGFRITNITDVTPIP 105 (117)
T ss_dssp GSSHHHHHHHHHHHHHHHTTS-----CC--CEEEEEE-ECSSSS----TTHHHHHHHHTTCEEEEEEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHh-----CC--cEEEEEE-eCCCcc----HHHHHHHHHhCCCEEEEEEEeCCCC
Confidence 578999999888888876653 31 1223444 333222 345677888999999876 566665
No 51
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=22.26 E-value=64 Score=23.32 Aligned_cols=42 Identities=5% Similarity=-0.069 Sum_probs=33.9
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccCChhHH
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPAC 167 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l 167 (232)
++|+|+-|....+....+..+.-....|.++..+.+.+.|..
T Consensus 3 ~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~ 44 (147)
T 3hgm_A 3 NRIMVPVDGSKGAVKALEKGVGLQQLTGAELYILCVFKHHSL 44 (147)
T ss_dssp SEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHH
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCccc
Confidence 479999999988887777777766678999998887777663
No 52
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=22.14 E-value=1.1e+02 Score=21.81 Aligned_cols=37 Identities=11% Similarity=0.019 Sum_probs=28.9
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHHCCCeEEEeccC
Q 026863 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLA 162 (232)
Q Consensus 126 ~~VvVGrD~R~SS~~La~Ala~gL~a~Gv~VidlG~~ 162 (232)
.+|+|+-|....+....+.++.-....|.++..+-+.
T Consensus 3 ~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~ 39 (141)
T 1jmv_A 3 KHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVD 39 (141)
T ss_dssp SEEEEEECCSTTHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred ceEEEEecCchhhHHHHHHHHHHHHhcCCEEEEEEEe
Confidence 4799999999998887777666666678888876555
No 53
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=22.07 E-value=3e+02 Score=21.80 Aligned_cols=82 Identities=13% Similarity=-0.002 Sum_probs=56.8
Q ss_pred CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHH-----HhhhcCCCCCCceEEEccCCCCCCCCCCcEEEeccc----
Q 026863 134 PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACF-----MSTLLPPFAYDASIMVGYMYKVNNFNRIAIEFAFWI---- 204 (232)
Q Consensus 134 ~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~-----yav~~~~~~a~gGImITASHN~~P~~~NGiK~~~~~---- 204 (232)
.|..+..=+..+...|...|++|....-.+.-.+. ++- ..+..+++.|++-.||- . .|.-+ ..+
T Consensus 49 ~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~-~dh~~~dc~vv~ilSHG--~---~g~i~-g~D~~~v 121 (164)
T 1qtn_A 49 DRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQL-MDHSNMDCFICCILSHG--D---KGIIY-GTDGQEA 121 (164)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-SCCTTCSCEEEEEESCE--E---TTEEE-CTTSCEE
T ss_pred CCCCcHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHH-hhccCCCEEEEEeCCCC--C---CCEEE-eeCCCEe
Confidence 78888899999999999999999866444443332 222 12356889999999996 3 23222 333
Q ss_pred hHHHHHHHHhhcCCCccc
Q 026863 205 SLYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 205 ~~~eIe~~~~~e~~~~~~ 222 (232)
..++|.+.|....|++|-
T Consensus 122 ~i~~i~~~F~~~~CpsL~ 139 (164)
T 1qtn_A 122 PIYELTSQFTGLKCPSLA 139 (164)
T ss_dssp EHHHHHGGGSTTTCGGGT
T ss_pred eHHHHHHHhccccChhhc
Confidence 257888888888898874
No 54
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=21.83 E-value=3.6e+02 Score=22.95 Aligned_cols=83 Identities=12% Similarity=-0.019 Sum_probs=56.1
Q ss_pred CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhh---cC-CCCCCceEEEccCCCCCCCCCCcEEEeccc---hH
Q 026863 134 PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTL---LP-PFAYDASIMVGYMYKVNNFNRIAIEFAFWI---SL 206 (232)
Q Consensus 134 ~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~---~~-~~~a~gGImITASHN~~P~~~NGiK~~~~~---~~ 206 (232)
.|..+..=++++...|...|++|....-.+.-.+.-++. .+ +..+++.|++=+||- - +|.-+ ..+ ..
T Consensus 50 ~R~g~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~dh~~~d~~v~~~lsHG--~---~~~i~-~~D~~v~l 123 (272)
T 1m72_A 50 SRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTAEMDHSDADCLLVAVLTHG--E---LGMLY-AKDTHYKP 123 (272)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCE--E---TTEEE-CSSSEECT
T ss_pred cCCCCHHHHHHHHHHHHHCCCEEEEecCcCHHHHHHHHHHHHHhhcCCCCEEEEEEcCCC--C---CCEEE-ecCCcEEH
Confidence 577888999999999999999999775455544432221 12 346788999999996 3 23222 222 24
Q ss_pred HHHHHHHhhcCCCccc
Q 026863 207 YEIRYCCVTDDCFSLT 222 (232)
Q Consensus 207 ~eIe~~~~~e~~~~~~ 222 (232)
++|-+.|....|.+|-
T Consensus 124 ~~i~~~f~~~~cpsL~ 139 (272)
T 1m72_A 124 DNLWYYFTADKCPTLA 139 (272)
T ss_dssp THHHHTTSTTTCGGGT
T ss_pred HHHHHHhccccChhhc
Confidence 6777777777787664
No 55
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=21.30 E-value=2.1e+02 Score=22.95 Aligned_cols=63 Identities=17% Similarity=0.243 Sum_probs=41.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecC---C--CChHHHHHHHHHHHHHCCCeEEEe-ccCChh
Q 026863 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDP---R--VSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (232)
Q Consensus 94 ~LTp~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~---R--~SS~~La~Ala~gL~a~Gv~Vidl-G~~pTP 165 (232)
.-||..+...++.+++...+. |. ..-.|.| +.. + --++ =.++++.+|...|++|..+ ..+|.|
T Consensus 68 ksTpyAAq~aa~~~a~~a~e~-----Gi--~~v~V~v-kG~gg~~~kgpG~-GresairaL~~~GlkI~~I~DvTpiP 136 (151)
T 2xzm_K 68 ESSPYAAMQAAIDVVNRCKEL-----KI--NALHIKL-RAKGGVETKQPGP-GAQSALRALARSGMKIGRIEDVTPIP 136 (151)
T ss_dssp GSCHHHHHHHHHHHHHHHHHH-----TC--CEEEEEE-ECCCTTSCCSCCS-HHHHHHHHHHHTSCEEEEEEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHc-----CC--eEEEEEE-EcCCCCCccCCCc-cHHHHHHHHHHCCCEEEEEEEeCCCC
Confidence 678999999999999887764 31 1223333 222 1 1122 2467789999999999877 577766
No 56
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=20.34 E-value=4.1e+02 Score=22.75 Aligned_cols=54 Identities=17% Similarity=0.148 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCC-ChHHHHHHHHHHHHHCCCeEEEec
Q 026863 98 SAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRV-SGPSLSVAVFAGLARAGCLVFDMG 160 (232)
Q Consensus 98 ~~v~~lg~A~g~~l~~~~~~~~g~~~~~~~VvVGrD~R~-SS~~La~Ala~gL~a~Gv~VidlG 160 (232)
+.+..+...+-+|+... ...+|+|.+.+.. +.+.++++++++|...|++|-...
T Consensus 234 ~~~~~~~~~~~~~~~~~---------~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~ 288 (402)
T 1e5d_A 234 DQCTFAVQKYVEYAEQK---------PTNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMW 288 (402)
T ss_dssp HHHHHHHHHHHHHHHCC---------CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHhcCC---------CCCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEE
Confidence 45556666666666542 1256777777764 578899999999999997665443
No 57
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=20.24 E-value=2.8e+02 Score=24.22 Aligned_cols=90 Identities=8% Similarity=-0.140 Sum_probs=58.9
Q ss_pred eEEEEec---------CCCChHHHHHHHHHHHHHCCCeEEEeccCChhHHHHhhh---cC-CCCCCceEEEccCCCCCCC
Q 026863 127 KVSLGKD---------PRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTL---LP-PFAYDASIMVGYMYKVNNF 193 (232)
Q Consensus 127 ~VvVGrD---------~R~SS~~La~Ala~gL~a~Gv~VidlG~~pTP~l~yav~---~~-~~~a~gGImITASHN~~P~ 193 (232)
-+||+.. .|..+..=++++...|...|++|....-.+.-.+.-++. .+ +.++++.|++=+||- -.
T Consensus 72 aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~~h~~~d~~vv~ilsHG--~~ 149 (305)
T 1f1j_A 72 CIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACILLSHG--EE 149 (305)
T ss_dssp EEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEEEEEEESCCHHHHHHHHHHHHHSCGGGEEEEEEEEESCE--ET
T ss_pred EEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCEEEEecCcCHHHHHHHHHHHHHhhcCCCCEEEEEEecCC--CC
Confidence 3677764 466688889999999999999998765445444433321 11 235688899999996 32
Q ss_pred CCCcEEEeccc---hHHHHHHHHhhcCCCccc
Q 026863 194 NRIAIEFAFWI---SLYEIRYCCVTDDCFSLT 222 (232)
Q Consensus 194 ~~NGiK~~~~~---~~~eIe~~~~~e~~~~~~ 222 (232)
| .++..+ ..++|-+.|....|.+|-
T Consensus 150 ---~-~i~g~D~~v~l~~I~~~f~~~~CpsL~ 177 (305)
T 1f1j_A 150 ---N-VIYGKDGVTPIKDLTAHFRGDRSKTLL 177 (305)
T ss_dssp ---T-EEECSSSEEEHHHHHHTTSTTTCGGGT
T ss_pred ---C-eEEecCCeEEHHHHHHHhhhccChhhc
Confidence 2 233333 246777777777787664
Done!