Query 026875
Match_columns 231
No_of_seqs 88 out of 90
Neff 3.4
Searched_HMMs 13730
Date Tue Mar 26 00:22:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026875.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026875hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a6qa1 a.159.1.1 (A:297-368) 9.1 40 0.0029 23.0 0.5 6 220-225 49-54 (72)
2 d1mhhe_ d.15.7.1 (E:) Immunogl 8.6 25 0.0018 23.6 -0.8 16 201-216 7-22 (63)
3 d1hz6a_ d.15.7.1 (A:) Immunogl 8.3 26 0.0019 23.7 -0.8 16 201-216 12-27 (67)
4 d1u07a_ d.212.1.2 (A:) TonB {E 6.0 22 0.0016 23.8 -2.2 42 62-103 13-54 (90)
5 d1t6sa1 a.4.5.60 (A:1-85) Segr 5.0 1.4E+02 0.01 19.5 1.7 17 187-203 20-36 (85)
6 d1v37a_ c.60.1.1 (A:) Alpha-ri 4.4 1.1E+02 0.0082 21.9 0.8 8 220-227 103-110 (171)
7 d1fzta_ c.60.1.1 (A:) Phosphog 4.1 1.2E+02 0.009 21.9 0.8 9 219-227 125-133 (211)
8 d1mmsa1 a.4.7.1 (A:71-140) Rib 3.9 1.6E+02 0.011 19.4 1.2 20 157-176 32-51 (70)
9 d1vpka2 d.131.1.1 (A:121-243) 3.9 77 0.0056 22.1 -0.6 30 190-219 9-38 (123)
10 d2gycg1 a.4.7.1 (G:73-140) Rib 3.5 1.8E+02 0.013 19.0 1.1 19 158-176 31-49 (68)
No 1
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine phosphatase 2C, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.09 E-value=40 Score=23.00 Aligned_cols=6 Identities=83% Similarity=1.658 Sum_probs=3.4
Q ss_pred cCCCCC
Q 026875 220 KPPGGE 225 (231)
Q Consensus 220 kPPGGe 225 (231)
=||||+
T Consensus 49 LPPGGG 54 (72)
T d1a6qa1 49 LPPGGE 54 (72)
T ss_dssp CCTTTG
T ss_pred CCCCcc
Confidence 366664
No 2
>d1mhhe_ d.15.7.1 (E:) Immunoglobulin light chain-binding domain of protein L {Peptostreptococcus magnus [TaxId: 1260]}
Probab=8.60 E-value=25 Score=23.59 Aligned_cols=16 Identities=44% Similarity=0.912 Sum_probs=12.0
Q ss_pred CCcCCCCCcCccccCC
Q 026875 201 SNIFADGKVESRDYLG 216 (231)
Q Consensus 201 sdIFaDgk~~~Rd~~g 216 (231)
|-|||||+.+.-.+-|
T Consensus 7 NlifadG~tQtAeFkG 22 (63)
T d1mhhe_ 7 NLIFADGKIQTAEFKG 22 (63)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred EEEEcCCcEEEEEEee
Confidence 5699999988766543
No 3
>d1hz6a_ d.15.7.1 (A:) Immunoglobulin light chain-binding domain of protein L {Peptostreptococcus magnus [TaxId: 1260]}
Probab=8.28 E-value=26 Score=23.71 Aligned_cols=16 Identities=31% Similarity=0.731 Sum_probs=12.1
Q ss_pred CCcCCCCCcCccccCC
Q 026875 201 SNIFADGKVESRDYLG 216 (231)
Q Consensus 201 sdIFaDgk~~~Rd~~g 216 (231)
|-|||||+.+.-.+-|
T Consensus 12 NlifadG~tQtAeFKG 27 (67)
T d1hz6a_ 12 NLIFANGSTQTAEFKG 27 (67)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred EEEEcCCcEEEEEEee
Confidence 5699999988766543
No 4
>d1u07a_ d.212.1.2 (A:) TonB {Escherichia coli [TaxId: 562]}
Probab=6.00 E-value=22 Score=23.77 Aligned_cols=42 Identities=10% Similarity=0.247 Sum_probs=30.1
Q ss_pred ChhhhhhhhhccCCCCCchhHHhhhhhhhhhhhhhcCCCCcC
Q 026875 62 TLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFA 103 (231)
Q Consensus 62 s~~evAKqrELSGn~isd~~~~~~KqlS~AK~KEmSGsdIFA 103 (231)
.-|+.|+++.+.|...=.-.-..+-.+.++++-+=+||.+|.
T Consensus 13 ~YP~~A~~~g~eG~V~v~f~I~~~G~v~~~~v~~ssg~~~ld 54 (90)
T d1u07a_ 13 QYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFE 54 (90)
T ss_dssp CCCHHHHHHTCCEEEEEEEEECTTSCEEEEEEEEEESSSSSH
T ss_pred CCCHHHHHCCCeEEEEEEEEEeCCCCEeEEEEEECCCchHHH
Confidence 467889999999988722122244567788888888998874
No 5
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=5.03 E-value=1.4e+02 Score=19.53 Aligned_cols=17 Identities=18% Similarity=0.557 Sum_probs=13.8
Q ss_pred CCcchhhhhhhhcCCCc
Q 026875 187 EKPLSVAKLREMSGSNI 203 (231)
Q Consensus 187 eK~lS~AKlrEmsGsdI 203 (231)
++|||..+|.++.|.+|
T Consensus 20 ~~Pls~~~L~~~l~~~~ 36 (85)
T d1t6sa1 20 EEPVNLQTLSQITAHKF 36 (85)
T ss_dssp SSCBCHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHHccCC
Confidence 67899999999887654
No 6
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]}
Probab=4.45 E-value=1.1e+02 Score=21.93 Aligned_cols=8 Identities=75% Similarity=1.360 Sum_probs=6.6
Q ss_pred cCCCCCCC
Q 026875 220 KPPGGESS 227 (231)
Q Consensus 220 kPPGGeSS 227 (231)
.||||||-
T Consensus 103 ~~p~gEs~ 110 (171)
T d1v37a_ 103 HPPGGESL 110 (171)
T ss_dssp CCTTSCCH
T ss_pred CCCCccch
Confidence 58999984
No 7
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=4.13 E-value=1.2e+02 Score=21.86 Aligned_cols=9 Identities=56% Similarity=0.855 Sum_probs=6.5
Q ss_pred ccCCCCCCC
Q 026875 219 RKPPGGESS 227 (231)
Q Consensus 219 rkPPGGeSS 227 (231)
-+||||||-
T Consensus 125 ~~~p~gEs~ 133 (211)
T d1fzta_ 125 IAPPNGESL 133 (211)
T ss_dssp CCSTTCCCH
T ss_pred CCCcCCcCH
Confidence 367888873
No 8
>d1mmsa1 a.4.7.1 (A:71-140) Ribosomal protein L11, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=3.89 E-value=1.6e+02 Score=19.44 Aligned_cols=20 Identities=25% Similarity=0.416 Sum_probs=15.4
Q ss_pred hhhhhhhhhhhhhcccCCCc
Q 026875 157 MKTSKKIYDKKFSELSGNDI 176 (231)
Q Consensus 157 ~kt~kki~~~K~~eltGN~I 176 (231)
.+....|-.+|..||+.+|+
T Consensus 32 ~~qv~eIAk~K~~dl~~~~l 51 (70)
T d1mmsa1 32 RKQIEEIAKTKMPDLNANSL 51 (70)
T ss_dssp HHHHHHHHHHHGGGCCCSSH
T ss_pred HHHHHHHHHHHhcccCCCCH
Confidence 35566777889999998864
No 9
>d1vpka2 d.131.1.1 (A:121-243) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
Probab=3.87 E-value=77 Score=22.05 Aligned_cols=30 Identities=37% Similarity=0.359 Sum_probs=26.1
Q ss_pred chhhhhhhhcCCCcCCCCCcCccccCCCcc
Q 026875 190 LSVAKLREMSGSNIFADGKVESRDYLGGVR 219 (231)
Q Consensus 190 lS~AKlrEmsGsdIFaDgk~~~Rd~~ggvr 219 (231)
++...|++|--.=+||=.+.++|-+|.||.
T Consensus 9 i~~~~L~~~I~~v~fA~s~d~~r~~L~Gv~ 38 (123)
T d1vpka2 9 VDTSLLEEMVEKVIFAAAKDEFMRNLNGVF 38 (123)
T ss_dssp EEHHHHHHHHHHHGGGSCCCTTCTTTSEEE
T ss_pred ECHHHHHHHHhheeEEeccCCccceEEeEE
Confidence 567899999999999988889999998864
No 10
>d2gycg1 a.4.7.1 (G:73-140) Ribosomal protein L11, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=3.45 E-value=1.8e+02 Score=19.04 Aligned_cols=19 Identities=26% Similarity=0.475 Sum_probs=14.4
Q ss_pred hhhhhhhhhhhhcccCCCc
Q 026875 158 KTSKKIYDKKFSELSGNDI 176 (231)
Q Consensus 158 kt~kki~~~K~~eltGN~I 176 (231)
+....|-..|..||+++++
T Consensus 31 ~qv~eIAk~K~~dl~~~~l 49 (68)
T d2gycg1 31 AQLQEIAQTKAADMTGADI 49 (68)
T ss_dssp HHHHSTTTTTTTTCCCSSS
T ss_pred HHHHHHHHHHhcccCCCCH
Confidence 4456667788999998876
Done!