Your job contains 1 sequence.
>026879
MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGT
LLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE
ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL
NVIDLFDAVVISSEVGCEKPDPRIFKAALGTSEHGFQLSCSVMPSSLFMIK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026879
(231 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012617 - symbol:AT1G14310 species:3702 "Arabi... 743 1.4e-73 1
TAIR|locus:2040272 - symbol:AT2G41250 species:3702 "Arabi... 386 9.2e-36 1
RGD|1585262 - symbol:Hdhd3 "haloacid dehalogenase-like hy... 232 1.9e-19 1
MGI|MGI:1919998 - symbol:Hdhd3 "haloacid dehalogenase-lik... 230 3.1e-19 1
WB|WBGene00010481 - symbol:K01G5.10 species:6239 "Caenorh... 219 4.6e-18 1
UNIPROTKB|E2R983 - symbol:HDHD3 "Uncharacterized protein"... 213 2.0e-17 1
UNIPROTKB|F1NN49 - symbol:HDHD3 "Uncharacterized protein"... 211 3.2e-17 1
UNIPROTKB|Q9BSH5 - symbol:HDHD3 "Haloacid dehalogenase-li... 211 3.2e-17 1
UNIPROTKB|Q5E9D6 - symbol:HDHD3 "Haloacid dehalogenase-li... 198 7.7e-16 1
POMBASE|SPAC7D4.05 - symbol:SPAC7D4.05 "hydrolase (predic... 173 3.4e-13 1
ZFIN|ZDB-GENE-040724-118 - symbol:hdhd3 "haloacid dehalog... 165 9.1e-12 1
FB|FBgn0029712 - symbol:CG15912 species:7227 "Drosophila ... 157 3.0e-10 1
SGD|S000004737 - symbol:YMR130W "Putative protein of unkn... 136 4.6e-07 1
FB|FBgn0016715 - symbol:Reg-2 "Rhythmically expressed gen... 111 1.9e-06 2
DICTYBASE|DDB_G0287017 - symbol:DDB_G0287017 "HAD-like hy... 91 9.6e-05 2
FB|FBgn0029801 - symbol:CG15771 species:7227 "Drosophila ... 114 0.00028 1
TIGR_CMR|DET_0533 - symbol:DET_0533 "HAD-superfamily hydr... 109 0.00044 1
>TAIR|locus:2012617 [details] [associations]
symbol:AT1G14310 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008967 "phosphoglycolate phosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA;ISS]
InterPro:IPR005833 InterPro:IPR006439 PRINTS:PR00413 EMBL:CP002684
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784 Pfam:PF13419
EMBL:AC012188 GO:GO:0008967 TIGRFAMs:TIGR01549 InterPro:IPR011949
TIGRFAMs:TIGR02252 UniGene:At.41977 UniGene:At.69279
IPI:IPI00527643 PIR:C86277 RefSeq:NP_172883.2
ProteinModelPortal:Q9M9T1 SMR:Q9M9T1 PRIDE:Q9M9T1
EnsemblPlants:AT1G14310.1 GeneID:837992 KEGG:ath:AT1G14310
TAIR:At1g14310 HOGENOM:HOG000006300 InParanoid:Q9M9T1 OMA:RYQGDGR
PhylomeDB:Q9M9T1 ProtClustDB:CLSN2683762 Genevestigator:Q9M9T1
Uniprot:Q9M9T1
Length = 254
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 142/209 (67%), Positives = 177/209 (84%)
Query: 1 MEACISKCCHGNSLLKALKMKPLRFNISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGT 60
MEAC+ +C G+ L++A M+PL S+ LR SS S GK +K+AYD +LLDAGGT
Sbjct: 1 MEACL-RCSRGSYLIEA--MRPL----SSSLRPSSSVSFS-TGKPIKRAYDGLLLDAGGT 52
Query: 61 LLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVVSE 120
LLQL++PV ETYAS+ +KYGL A+IK+GF++ F+APWPEKLRY+GDGRPFW+LVVSE
Sbjct: 53 LLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSE 112
Query: 121 ATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVAVVSNFDTRLRKLLKDL 180
ATGC+++DYFE+VY+YYA GEAWHLP GAY+++ LLKDAGVK+AVVSNFDTRLRKLLKDL
Sbjct: 113 ATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDL 172
Query: 181 NVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
NVID+FDAV++S+EVG EKPD RIFK+AL
Sbjct: 173 NVIDMFDAVIVSAEVGYEKPDERIFKSAL 201
>TAIR|locus:2040272 [details] [associations]
symbol:AT2G41250 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008967 "phosphoglycolate
phosphatase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA;ISS] [GO:0046685 "response to
arsenic-containing substance" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR005833
InterPro:IPR006439 PRINTS:PR00413 Pfam:PF00702 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 eggNOG:COG1011 GO:GO:0008967 EMBL:AC005662
TIGRFAMs:TIGR01549 InterPro:IPR011949 TIGRFAMs:TIGR02252
HOGENOM:HOG000006300 ProtClustDB:CLSN2683762 EMBL:AY070081
EMBL:AY133731 EMBL:AK227199 IPI:IPI00527741 PIR:F84839
RefSeq:NP_181658.1 UniGene:At.28403 ProteinModelPortal:Q9ZVB6
SMR:Q9ZVB6 STRING:Q9ZVB6 PaxDb:Q9ZVB6 PRIDE:Q9ZVB6
EnsemblPlants:AT2G41250.1 GeneID:818724 KEGG:ath:AT2G41250
TAIR:At2g41250 InParanoid:Q9ZVB6 OMA:IFAIALE PhylomeDB:Q9ZVB6
ArrayExpress:Q9ZVB6 Genevestigator:Q9ZVB6 Uniprot:Q9ZVB6
Length = 290
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 77/161 (47%), Positives = 105/161 (65%)
Query: 50 YDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWP-EKLRYEG 108
+ A+L+DA GTLL A+P + Y +I KYG+ A+I +R+A+ PW LRY
Sbjct: 77 HKALLVDAVGTLLVPAQPTAQIYKNIGEKYGVEYSEAEILTRYRRAYQKPWGGSHLRYVN 136
Query: 109 DGRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHL-PHGAYQSILLLKDAGVKVAVVS 167
D RPFW+ +V+ +TGC++ YFEE+Y Y+ +AW L A + +K+AGVKVA+VS
Sbjct: 137 DARPFWQYIVTASTGCSDSQYFEELYSYFTTEQAWKLCDPDAGKVFKAIKEAGVKVAIVS 196
Query: 168 NFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAA 208
NFDTRLR LL+ L D FDAV +S+EV EKP+P IF A
Sbjct: 197 NFDTRLRPLLRALRCEDWFDAVAVSAEVEAEKPNPTIFLKA 237
>RGD|1585262 [details] [associations]
symbol:Hdhd3 "haloacid dehalogenase-like hydrolase domain
containing 3" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0008967 "phosphoglycolate
phosphatase activity" evidence=IEA] InterPro:IPR005833
InterPro:IPR006402 InterPro:IPR006439 PRINTS:PR00413 RGD:1585262
GO:GO:0005739 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 eggNOG:COG1011 Pfam:PF13419 TIGRFAMs:TIGR01509
GO:GO:0008967 TIGRFAMs:TIGR01549 CTD:81932
GeneTree:ENSGT00390000015582 HOGENOM:HOG000075006
HOVERGEN:HBG101862 OrthoDB:EOG40K80N InterPro:IPR011949
TIGRFAMs:TIGR02252 OMA:RYQGDGR EMBL:CH473978 EMBL:BC166898
IPI:IPI00203558 RefSeq:NP_001102981.1 UniGene:Rn.17659
Ensembl:ENSRNOT00000020380 GeneID:688746 KEGG:rno:688746
UCSC:RGD:1585262 NextBio:737168 Genevestigator:B2RYT7
Uniprot:B2RYT7
Length = 251
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 66/182 (36%), Positives = 98/182 (53%)
Query: 56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEK-LRYEGDGR 111
D TL+++ PV E YAS AR +G+ V++ +++ FR+AF A +P L R
Sbjct: 13 DVKDTLIKVRRPVGEEYASKARAHGVLVEATAVEQAFRQAFRAQSHSFPNYGLSLGLTSR 72
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
+W VV G + +++YE ++ AW + GA ++ + G+K+A
Sbjct: 73 QWWMDVVLHTFRLAGVPDAQAMAPVADQLYEDFSSPFAWRVLEGAETTLKGCRKRGMKLA 132
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALGTSEHGFQLSCSVMP 224
VVSNFD RL +L L + + FD V+ S VGC KPDPRIF+ AL QL+C V P
Sbjct: 133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREAL-------QLAC-VEP 184
Query: 225 SS 226
S+
Sbjct: 185 SA 186
>MGI|MGI:1919998 [details] [associations]
symbol:Hdhd3 "haloacid dehalogenase-like hydrolase domain
containing 3" species:10090 "Mus musculus" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008967 "phosphoglycolate phosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR005833 InterPro:IPR006402 InterPro:IPR006439
PRINTS:PR00413 MGI:MGI:1919998 GO:GO:0005739 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 eggNOG:COG1011 Pfam:PF13419
TIGRFAMs:TIGR01509 GO:GO:0008967 EMBL:AL732594 TIGRFAMs:TIGR01549
CTD:81932 GeneTree:ENSGT00390000015582 HOGENOM:HOG000075006
HOVERGEN:HBG101862 OMA:AGWPKPD OrthoDB:EOG40K80N InterPro:IPR011949
TIGRFAMs:TIGR02252 EMBL:AK013245 EMBL:BC003491 IPI:IPI00112128
RefSeq:NP_077219.1 UniGene:Mm.41506 ProteinModelPortal:Q9CYW4
SMR:Q9CYW4 PhosphoSite:Q9CYW4 PaxDb:Q9CYW4 PRIDE:Q9CYW4
Ensembl:ENSMUST00000037820 GeneID:72748 KEGG:mmu:72748
UCSC:uc008tey.1 InParanoid:Q9CYW4 NextBio:336856 Bgee:Q9CYW4
Genevestigator:Q9CYW4 Uniprot:Q9CYW4
Length = 251
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 59/165 (35%), Positives = 89/165 (53%)
Query: 56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
D TL++L PV E YAS AR +G+ V+ +++ FR+A+ A +P G R
Sbjct: 13 DVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSR 72
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
+W+ VV G + +++YE ++ W + GA ++ + G+K+A
Sbjct: 73 QWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRKRGLKLA 132
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
VVSNFD RL +L L + + FD V+ S VGC KPDPRIF+ AL
Sbjct: 133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREAL 177
>WB|WBGene00010481 [details] [associations]
symbol:K01G5.10 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008967
"phosphoglycolate phosphatase activity" evidence=IEA] [GO:0008236
"serine-type peptidase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007281
"germ cell development" evidence=IMP] InterPro:IPR006439
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0042127 eggNOG:COG1011
Pfam:PF13419 GO:GO:0007281 GO:GO:0008967 GO:GO:0040020 EMBL:Z92803
TIGRFAMs:TIGR01549 GeneTree:ENSGT00390000015582 InterPro:IPR011949
TIGRFAMs:TIGR02252 RefSeq:NP_499376.1 UniGene:Cel.32899
ProteinModelPortal:Q9BI82 SMR:Q9BI82 EnsemblMetazoa:K01G5.10
GeneID:186851 KEGG:cel:CELE_K01G5.10 UCSC:K01G5.10 CTD:186851
WormBase:K01G5.10 InParanoid:Q9BI82 OMA:RTIGQKY NextBio:933206
Uniprot:Q9BI82
Length = 248
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 66/195 (33%), Positives = 93/195 (47%)
Query: 27 ISNRLRCSSMPLHSGVGKSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSA 86
+SN LR +S L S + LDA TL+ + E Y+ AR+Y L VDS
Sbjct: 2 LSNLLRTTSRNL------STPPVVKVLSLDARDTLITMKESPPIVYSRFARQYDLEVDSD 55
Query: 87 DIKKGF-----RKAFAAPWPEKLRYEGDGRPFWRLVVSEAT--GCTNDDYFEEV------ 133
I F R + A+P + G G W + V +T C D V
Sbjct: 56 QIMGSFLKNYKRMSIASPC---FGFNGIGNKSWWIEVVSSTLLDCAPDSEKGRVEVIAGA 112
Query: 134 -YEYYAKGEAWHLPHG-AYQSILLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVI 191
Y +YA E W L Q++ L+ G+ + V+SNFD+RL+ LL N++DLF V+
Sbjct: 113 LYNHYATPEPWKLVESDTRQTLQKLRLKGIILVVISNFDSRLKSLLSQFNLLDLFSMTVL 172
Query: 192 SSEVGCEKPDPRIFK 206
S E+G EKPD +IF+
Sbjct: 173 SGEIGYEKPDEKIFQ 187
>UNIPROTKB|E2R983 [details] [associations]
symbol:HDHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA]
InterPro:IPR005833 InterPro:IPR006402 InterPro:IPR006439
PRINTS:PR00413 GO:GO:0005739 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 Pfam:PF13419 TIGRFAMs:TIGR01509 GO:GO:0008967
TIGRFAMs:TIGR01549 CTD:81932 GeneTree:ENSGT00390000015582
OMA:AGWPKPD InterPro:IPR011949 TIGRFAMs:TIGR02252 EMBL:AAEX03008083
RefSeq:XP_538805.2 ProteinModelPortal:E2R983
Ensembl:ENSCAFT00000005200 GeneID:481683 KEGG:cfa:481683
NextBio:20856432 Uniprot:E2R983
Length = 251
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 58/165 (35%), Positives = 88/165 (53%)
Query: 56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
D TLL+L PV E YA+ AR +GL V++A + + FR+A+ +P +G R
Sbjct: 13 DVKDTLLRLRHPVGEEYAAKARAHGLEVEAATLGQAFRQAYRTQSHSFPNYGLSQGLTSR 72
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
+W VV + G + +++YE ++K W + GA ++ + G+++A
Sbjct: 73 RWWLDVVLQTFYLAGVRDAQAVAPIADQLYEDFSKPCTWQVLEGAAATLRGCRKRGLRLA 132
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
VVSNFD RL +L L + + FD V+ S G KPDPRIF AL
Sbjct: 133 VVSNFDRRLEDILTGLGLREHFDFVLTSEAAGWPKPDPRIFHEAL 177
>UNIPROTKB|F1NN49 [details] [associations]
symbol:HDHD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008967 "phosphoglycolate phosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR005833 InterPro:IPR006402 InterPro:IPR006439
PRINTS:PR00413 GO:GO:0005739 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 Pfam:PF13419 TIGRFAMs:TIGR01509 GO:GO:0008967
TIGRFAMs:TIGR01549 GeneTree:ENSGT00390000015582 OMA:AGWPKPD
InterPro:IPR011949 TIGRFAMs:TIGR02252 EMBL:AADN02026939
IPI:IPI00576174 ProteinModelPortal:F1NN49
Ensembl:ENSGALT00000014401 Uniprot:F1NN49
Length = 239
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 59/165 (35%), Positives = 81/165 (49%)
Query: 56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG-DGR 111
D TLL+L PV YA+ A+ +G+ V + + F+ A+ A +P R EG R
Sbjct: 11 DVKDTLLRLRRPVGLIYAAEAQAHGVQVQPEALSQSFQAAYRAQSRRFPNYGRAEGLSSR 70
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
+W VV E TG D E +Y Y W L A +++ G+++
Sbjct: 71 QWWVDVVKETFRLTGVHEDTVLTLIAENLYRDYCSARNWELLPEASETLSWCHQHGLRMG 130
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
VVSNFD RL +L N+ F V+ S VG KPDP+IFKAAL
Sbjct: 131 VVSNFDNRLESILVQCNLRHHFHFVLTSEAVGVAKPDPKIFKAAL 175
>UNIPROTKB|Q9BSH5 [details] [associations]
symbol:HDHD3 "Haloacid dehalogenase-like hydrolase
domain-containing protein 3" species:9606 "Homo sapiens"
[GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005833 InterPro:IPR006439
PRINTS:PR00413 GO:GO:0005739 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 eggNOG:COG1011 Pfam:PF13419 GO:GO:0008967
EMBL:AL137066 TIGRFAMs:TIGR01549 CTD:81932 HOGENOM:HOG000075006
HOVERGEN:HBG101862 OMA:AGWPKPD OrthoDB:EOG40K80N InterPro:IPR011949
TIGRFAMs:TIGR02252 EMBL:AK315401 EMBL:BC005048 EMBL:BC031878
IPI:IPI00009931 RefSeq:NP_112496.1 UniGene:Hs.7739 PDB:3K1Z
PDBsum:3K1Z ProteinModelPortal:Q9BSH5 SMR:Q9BSH5 IntAct:Q9BSH5
MINT:MINT-1481645 PhosphoSite:Q9BSH5 DMDM:74752302 PaxDb:Q9BSH5
PeptideAtlas:Q9BSH5 PRIDE:Q9BSH5 Ensembl:ENST00000238379
Ensembl:ENST00000374180 GeneID:81932 KEGG:hsa:81932 UCSC:uc004bhi.1
GeneCards:GC09M116135 H-InvDB:HIX0169357 HGNC:HGNC:28171
HPA:HPA020427 HPA:HPA024158 HPA:HPA024585 neXtProt:NX_Q9BSH5
PharmGKB:PA134868152 InParanoid:Q9BSH5 PhylomeDB:Q9BSH5
EvolutionaryTrace:Q9BSH5 GenomeRNAi:81932 NextBio:72279 Bgee:Q9BSH5
CleanEx:HS_HDHD3 Genevestigator:Q9BSH5 Uniprot:Q9BSH5
Length = 251
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 56/165 (33%), Positives = 90/165 (54%)
Query: 56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEK-LRYEGDGR 111
D TLL+L P+ E YA+ AR +GL V+ + +++GFR+A+ A +P L + R
Sbjct: 13 DVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSR 72
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
+W VV + G + E++Y+ ++ W + GA ++ + G+++A
Sbjct: 73 QWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLA 132
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
V+SNFD RL +L L + + FD V+ S G KPDPRIF+ AL
Sbjct: 133 VISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEAL 177
>UNIPROTKB|Q5E9D6 [details] [associations]
symbol:HDHD3 "Haloacid dehalogenase-like hydrolase
domain-containing protein 3" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008967 "phosphoglycolate
phosphatase activity" evidence=IEA] InterPro:IPR005833
InterPro:IPR006402 InterPro:IPR006439 PRINTS:PR00413 GO:GO:0005739
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
eggNOG:COG1011 Pfam:PF13419 TIGRFAMs:TIGR01509 GO:GO:0008967
TIGRFAMs:TIGR01549 EMBL:BT020984 EMBL:BC102640 IPI:IPI00692399
RefSeq:NP_001014896.1 UniGene:Bt.49719 ProteinModelPortal:Q5E9D6
PRIDE:Q5E9D6 Ensembl:ENSBTAT00000000314 GeneID:510680
KEGG:bta:510680 CTD:81932 GeneTree:ENSGT00390000015582
HOGENOM:HOG000075006 HOVERGEN:HBG101862 InParanoid:Q5E9D6
OMA:AGWPKPD OrthoDB:EOG40K80N NextBio:20869565 InterPro:IPR011949
TIGRFAMs:TIGR02252 Uniprot:Q5E9D6
Length = 251
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 54/165 (32%), Positives = 85/165 (51%)
Query: 56 DAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLRYE-GDG---R 111
D TLL+L PV YA+ AR +GL V++ + + F++A+ A Y G G
Sbjct: 13 DVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSH 72
Query: 112 PFWRLVVSEA---TGCTNDDYF----EEVYEYYAKGEAWHLPHGAYQSILLLKDAGVKVA 164
+W +V + G + E++Y+ ++ W + GA ++ + G+K+A
Sbjct: 73 QWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEGAEATLRGCRKRGLKLA 132
Query: 165 VVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
VVSNFD RL +L+ + + + FD V+ S G KPDPRIF AL
Sbjct: 133 VVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEAL 177
>POMBASE|SPAC7D4.05 [details] [associations]
symbol:SPAC7D4.05 "hydrolase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008967 "phosphoglycolate
phosphatase activity" evidence=IEA] InterPro:IPR006439
PomBase:SPAC7D4.05 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
eggNOG:COG1011 Pfam:PF13419 GO:GO:0008967 TIGRFAMs:TIGR01549
InterPro:IPR011949 TIGRFAMs:TIGR02252 PIR:T39083 RefSeq:NP_593854.2
EnsemblFungi:SPAC7D4.05.1 GeneID:2541452 OrthoDB:EOG4CJZSZ
NextBio:20802554 Uniprot:O14262
Length = 228
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 54/174 (31%), Positives = 87/174 (50%)
Query: 44 KSVKKAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEK 103
K+++K V DA GT+L L++PV Y+ +A+KYG++ +I+ KAF + EK
Sbjct: 5 KNIQKI-KLVTFDAFGTILHLSKPVPIVYSEVAQKYGVHATIDEIEHNSNKAFK-DFSEK 62
Query: 104 LRYEG--DG-RPF-WRLVVSEATGCTN--DDYFEEVYEYYAKGEAWHLPHGAYQSILLLK 157
+ G G P W + V E + T + EE++ Y++K + + H L
Sbjct: 63 HKNHGKKSGLNPHDWWIKVIEHSFPTPVPAEMAEELWSYFSKKTGYTI-HPLLIDFLKRN 121
Query: 158 DAGVK--VAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
K + ++SN D R+R +L+D + L D S +VG EKP IF A+
Sbjct: 122 KEERKYIIGIISNTDERIRTVLEDYGIDHLIDIYAFSYDVGFEKPSREIFDYAM 175
>ZFIN|ZDB-GENE-040724-118 [details] [associations]
symbol:hdhd3 "haloacid dehalogenase-like hydrolase
domain containing 3" species:7955 "Danio rerio" [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008967 "phosphoglycolate phosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005833 InterPro:IPR006439 PRINTS:PR00413
ZFIN:ZDB-GENE-040724-118 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 eggNOG:COG1011 Pfam:PF13419 GO:GO:0008967
TIGRFAMs:TIGR01549 CTD:81932 GeneTree:ENSGT00390000015582
HOGENOM:HOG000075006 HOVERGEN:HBG101862 OMA:AGWPKPD
OrthoDB:EOG40K80N InterPro:IPR011949 TIGRFAMs:TIGR02252
EMBL:AL732598 EMBL:BC095713 EMBL:BC116519 IPI:IPI00483707
RefSeq:NP_001038732.2 UniGene:Dr.91552 ProteinModelPortal:Q7T012
Ensembl:ENSDART00000103776 GeneID:553464 KEGG:dre:553464
InParanoid:Q7T012 NextBio:20880213 Bgee:Q7T012 Uniprot:Q7T012
Length = 242
Score = 165 (63.1 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 50/168 (29%), Positives = 76/168 (45%)
Query: 53 VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAP---WPEKLRYEG- 108
VL D TLL++ V E Y A++ GL + A ++ FR A+ P R +G
Sbjct: 8 VLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSPAQVETAFRLAYKQKSQLLPNYGRAQGM 67
Query: 109 DGRPFWRLVVSEATG-C------TNDDYFEEVYEYYAKGEAWHLPHGAYQSILLLKDAGV 161
D + +W +V + G C D +Y + E W + + ++ G+
Sbjct: 68 DSQVWWTGLVRDTFGQCGVHDPALLDKLANNLYHNFCGPENWEVFSDSNSTLKSCTALGL 127
Query: 162 KVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
K VVSNFD RL +L+ ++ F +V S + KPDP IF AL
Sbjct: 128 KQGVVSNFDRRLEGILRGCGLLTHFSFIVTSEDARVAKPDPAIFSQAL 175
>FB|FBgn0029712 [details] [associations]
symbol:CG15912 species:7227 "Drosophila melanogaster"
[GO:0008967 "phosphoglycolate phosphatase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] InterPro:IPR005833
InterPro:IPR006439 PRINTS:PR00413 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 EMBL:AE014298 Pfam:PF13419
GO:GO:0008967 TIGRFAMs:TIGR01549 GeneTree:ENSGT00390000015582
InterPro:IPR011949 TIGRFAMs:TIGR02252 OrthoDB:EOG40CFZW
RefSeq:NP_572168.1 UniGene:Dm.31034 ProteinModelPortal:Q9W4J7
SMR:Q9W4J7 IntAct:Q9W4J7 MINT:MINT-772884 PRIDE:Q9W4J7
EnsemblMetazoa:FBtr0070677 GeneID:31385 KEGG:dme:Dmel_CG15912
UCSC:CG15912-RA FlyBase:FBgn0029712 InParanoid:Q9W4J7 OMA:KDYAPAR
PhylomeDB:Q9W4J7 GenomeRNAi:31385 NextBio:773378
ArrayExpress:Q9W4J7 Bgee:Q9W4J7 Uniprot:Q9W4J7
Length = 246
Score = 157 (60.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 48 KAYDAVLLDAGGTLLQLAEPVEETYASIARKYGLN-VDSADIKKGFR---KAFAAPWPEK 103
K + V D TLL+L +P+ + Y A ++G+ VD +++ FR KA ++ P
Sbjct: 12 KRFRLVTFDVTDTLLRLEDPLRQ-YHQTAEEFGVTGVDRRRLEQCFRQQFKAMSSEHPNF 70
Query: 104 LRYE-G-DGRPFWRLVVSEATGCTNDDYFEEVYE--------YYAKGEAWHLPHGAYQSI 153
RY G D + +W +V+ C + E E + W +GA + +
Sbjct: 71 GRYSPGLDWQRWWLQLVARTFSCVDHGLAPEKLEKIGQRLISVFRTSACWSHVNGAQELV 130
Query: 154 LLLKDAGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAAL 209
+++AG V ++SNFD+ L ++L + FD ++ S E G KP+ IF+ L
Sbjct: 131 QNVRNAGKCVGIISNFDSSLPQVLDAMGFAGKFDFILTSYEAGVMKPERGIFEIPL 186
>SGD|S000004737 [details] [associations]
symbol:YMR130W "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0008967
"phosphoglycolate phosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008152
"metabolic process" evidence=IEA] InterPro:IPR006439 SGD:S000004737
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
EMBL:BK006946 eggNOG:COG1011 Pfam:PF13419 GO:GO:0008967 EMBL:Z48622
TIGRFAMs:TIGR01549 KO:K07025 GeneTree:ENSGT00390000015582
InterPro:IPR011949 TIGRFAMs:TIGR02252 OMA:FGARCDN OrthoDB:EOG4CJZSZ
EMBL:AY557987 PIR:S53060 RefSeq:NP_013849.1
ProteinModelPortal:Q04223 SMR:Q04223 PaxDb:Q04223
PeptideAtlas:Q04223 EnsemblFungi:YMR130W GeneID:855160
KEGG:sce:YMR130W CYGD:YMR130w HOGENOM:HOG000141737 NextBio:978581
Genevestigator:Q04223 GermOnline:YMR130W Uniprot:Q04223
Length = 302
Score = 136 (52.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 53 VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAA---PWPEKLRYEGD 109
+ DA TL PV E Y + RKYG+ + + + F F +P+ +Y G
Sbjct: 24 ITFDAYNTLYATKLPVMEQYCIVGRKYGIKANPSTLTNNFPHVFKKLKEDYPQYGKYSGI 83
Query: 110 GRPFWRLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSIL-LLKDA-----GVKV 163
W ++ N+ E + E + E + + Y ++ LKD V +
Sbjct: 84 KPEQWWSILIRNVFAPNEIPDEMINEILMRFEGFD-SYFVYPDLIKFLKDLKSRHPDVIL 142
Query: 164 AVVSNFDTRLRKLLKDLNVIDLFDA-VVISSEVGCEKPDPRIFKAAL 209
+VSN D KLLK++ + + F + +S E+ KPD IF+ AL
Sbjct: 143 GIVSNTDPIFYKLLKNIGLFETFSGHIYLSYELNLAKPDRAIFQYAL 189
>FB|FBgn0016715 [details] [associations]
symbol:Reg-2 "Rhythmically expressed gene 2" species:7227
"Drosophila melanogaster" [GO:0008967 "phosphoglycolate phosphatase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] InterPro:IPR006439 Pfam:PF00702 EMBL:AE014296
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
eggNOG:COG1011 GO:GO:0008967 TIGRFAMs:TIGR01549
GeneTree:ENSGT00390000015582 InterPro:IPR011949 TIGRFAMs:TIGR02252
EMBL:U65492 RefSeq:NP_612043.1 UniGene:Dm.2447
ProteinModelPortal:Q94915 SMR:Q94915 PaxDb:Q94915
EnsemblMetazoa:FBtr0072561 GeneID:38075 KEGG:dme:Dmel_CG3200
CTD:38075 FlyBase:FBgn0016715 InParanoid:Q94915 OMA:FGARCDN
OrthoDB:EOG40CFZW PhylomeDB:Q94915 GenomeRNAi:38075 NextBio:806865
Bgee:Q94915 GermOnline:CG3200 Uniprot:Q94915
Length = 260
Score = 111 (44.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 128 DYFEEVYEYYAKGEAWHLPHGAYQSILLL----KDAGVKVAVVSNFDTRLRKLLKDLNVI 183
++ + E Y W +G+ + + L K K+ V++NFD RL LL++ +
Sbjct: 99 NFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPEKCKLGVIANFDPRLPTLLQNTKLD 158
Query: 184 DLFDAVVISSEVGCEKPDPRIFKAALGTS 212
D + S EV EKPDP+IF+ A+ S
Sbjct: 159 QYLDFAINSYEVQAEKPDPQIFQKAMEKS 187
Score = 55 (24.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 53 VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFAAPWPEKLR-YEGDGR 111
+ D TLLQ + Y I +G D+ ++ K F+ A W + R Y GR
Sbjct: 10 ITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFK----ANWYKMNRDYPNFGR 65
>DICTYBASE|DDB_G0287017 [details] [associations]
symbol:DDB_G0287017 "HAD-like hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0008967
"phosphoglycolate phosphatase activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR006439 dictyBase:DDB_G0287017
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
eggNOG:COG1011 Pfam:PF13419 GO:GO:0008967 EMBL:AAFI02000095
TIGRFAMs:TIGR01549 OMA:FGARCDN RefSeq:XP_637443.1
ProteinModelPortal:Q54KY9 EnsemblProtists:DDB0187238 GeneID:8625911
KEGG:ddi:DDB_G0287017 InParanoid:Q54KY9 Uniprot:Q54KY9
Length = 285
Score = 91 (37.1 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 157 KDAGVKVAVVSNFDTRLRKLLKDLNVIDLF-DAVVISSEVGCEKPDPRIFK 206
+D G + V+SNFD RL +LK L++ + F + V S + G +KP +IF+
Sbjct: 152 EDNGCYLGVISNFDERLTPILKQLDIENYFQNNVTTSIDCGYQKPHEKIFQ 202
Score = 64 (27.6 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 52 AVLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKAFA 97
A++ DA GTL ++ + Y + ++G+ + DI F K F+
Sbjct: 4 AIIFDATGTLFKVRGTISGNYNKVLNQHGIKLKQ-DIDNNFLKQFS 48
>FB|FBgn0029801 [details] [associations]
symbol:CG15771 species:7227 "Drosophila melanogaster"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008967
"phosphoglycolate phosphatase activity" evidence=IEA]
InterPro:IPR005833 InterPro:IPR006439 InterPro:IPR011950
PRINTS:PR00413 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 EMBL:AE014298 Pfam:PF13419 GO:GO:0008967
TIGRFAMs:TIGR01549 TIGRFAMs:TIGR02253 GeneTree:ENSGT00390000003094
UniGene:Dm.22690 GeneID:31500 KEGG:dme:Dmel_CG15771
FlyBase:FBgn0029801 GenomeRNAi:31500 NextBio:773930 EMBL:BT031127
RefSeq:NP_572257.2 SMR:Q9W481 IntAct:Q9W481 MINT:MINT-315520
EnsemblMetazoa:FBtr0070809 UCSC:CG15771-RA InParanoid:Q9W481
OMA:DENAFRC Uniprot:Q9W481
Length = 355
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 84 DSADIKKGFRKAFAAPWPEKLRYEGDGRPFWRLVV-SEATGCTNDDYFEEVYEYYAKGEA 142
D+ + F KAF P+ + D WR + E+ + E++Y + K
Sbjct: 65 DATQATQNFLKAFRR-CPDNSQTSLDS---WRTHLWRESLPARHKHLAEQIYPKWLKLRY 120
Query: 143 WHL--PHGAYQSILLLKDAGVKVAVVSNFDTRLR-KLLKDLNVIDLFDAVVISSEVGCEK 199
+L P Q +L ++ AG +A+++N + + + + +LNV FD V++SS++ EK
Sbjct: 121 RYLAVPADYVQLLLRMRQAGYALALITNGPSNAQWEKVAELNVRGYFDCVLVSSDLPWEK 180
Query: 200 PDPRIFKAA 208
P P IF AA
Sbjct: 181 PHPEIFYAA 189
>TIGR_CMR|DET_0533 [details] [associations]
symbol:DET_0533 "HAD-superfamily hydrolase, subfamily IA"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR005833 InterPro:IPR006402
InterPro:IPR006439 PRINTS:PR00413 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 eggNOG:COG1011 Pfam:PF13419
TIGRFAMs:TIGR01509 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0008967 TIGRFAMs:TIGR01549 RefSeq:YP_181277.1
ProteinModelPortal:Q3Z922 STRING:Q3Z922 GeneID:3230149
KEGG:det:DET0533 PATRIC:21608133 HOGENOM:HOG000275415 OMA:ELEYCID
ProtClustDB:CLSK837432 BioCyc:DETH243164:GJNF-533-MONOMER
Uniprot:Q3Z922
Length = 234
Score = 109 (43.4 bits), Expect = 0.00044, P = 0.00044
Identities = 44/174 (25%), Positives = 71/174 (40%)
Query: 53 VLLDAGGTLLQLAEPVEETYASIARKYGLNVDSADIKKGFRKA---FA---APWPEKLRY 106
V D TL+ EE + + G ++ D+ KA F A P LR
Sbjct: 5 VFFDLYNTLIGYQPSREEMTVKLLAELGYTINEDDLYLPVNKADEYFYQQNAQKPISLRE 64
Query: 107 EGDGRPFW----RLVVSEATGCTNDDYFEEVYEYYAKGEAWHLPHGAYQSILL----LKD 158
+ W R+++ E + + + K W + YQ ++ LK
Sbjct: 65 RAEQMAVWSHYYRIILEEIGIEPKPELINNLISRW-KNLKWEMT--LYQDVIPCLENLKK 121
Query: 159 AGVKVAVVSNFDTRLRKLLKDLNVIDLFDAVVISSEVGCEKPDPRIFKAALGTS 212
+K+ ++SN + + +L + + VVIS EVG KP+P IF+AAL S
Sbjct: 122 RNLKIGLISNAEKDMSELFNKTGLNKYLETVVISQEVGVTKPNPLIFQAALKKS 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 231 231 0.00084 113 3 11 22 0.39 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 598 (64 KB)
Total size of DFA: 184 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.48u 0.24s 19.72t Elapsed: 00:00:01
Total cpu time: 19.48u 0.24s 19.72t Elapsed: 00:00:01
Start: Sat May 11 09:25:01 2013 End: Sat May 11 09:25:02 2013