BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026881
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1SJC8|RUVX_NOCSJ Putative Holliday junction resolvase OS=Nocardioides sp. (strain
BAA-499 / JS614) GN=Noca_2408 PE=3 SV=1
Length = 156
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 60 WRGGFSLGVDLGLSRTGLALS--KGFCVRPL-TVLKLRGEKLELQLLEIAQREETD---E 113
R G +G+D G +R G+A S GF P+ TV + +G+ + + A+ +E E
Sbjct: 1 MRAGVRIGIDPGDARIGVARSDPSGFLATPVETVRRGKGDLARIGRILAAEEDEGATVLE 60
Query: 114 FIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173
++GLP+S G E P + KVR AGRLA R A V L+DE T+ A + + G +
Sbjct: 61 VVVGLPRSLSGREGPAAAKVREFAGRLAARVAP--VPVRLVDERMTTVSAEAMLRDQGRT 118
Query: 174 KSARQTKTDAYAAVILLERYF 194
R+ D AAV++L+
Sbjct: 119 GGKRRAVVDQAAAVLILQHAL 139
>sp|Q2RHZ7|RUVX_MOOTA Putative Holliday junction resolvase OS=Moorella thermoacetica
(strain ATCC 39073) GN=Moth_1640 PE=3 SV=1
Length = 140
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKSW 122
+G+D+G G+ALS G+ + LT ++ R +L L E+ +R +E ++GLP++
Sbjct: 4 MGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLPRNM 63
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
+GS PQ+ VR+ A L AE G V+ DE T+ A ++ LS+ R+ D
Sbjct: 64 NGSLGPQAEAVRAFARHL---QAEVGLPVHFFDERLTTVAAGRVLLEADLSRRRRRQVID 120
Query: 183 AYAAVILLERYFSMSGQ 199
AA +L+ Y GQ
Sbjct: 121 QVAATYILQGYLDRLGQ 137
>sp|Q2IQC1|RUVX_ANADE Putative Holliday junction resolvase OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=Adeh_1232 PE=3 SV=1
Length = 137
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 65 SLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKS 121
+LGVDLG R GLA++ R +T + RGE +L + E+A+ E ++GLP +
Sbjct: 3 TLGVDLGRVRIGLAVADEILRTARAVTTVVRRGEAEDLAAIAEVARDYEVTRAVVGLPLN 62
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181
DG+E P + R A RL A G V L DE +S EA R+ G+S ++ +
Sbjct: 63 MDGTEGPSARLARGFAPRL---EAALGVPVELFDERLSSFEAESRLRARGVSARDQRGQV 119
Query: 182 DAYAAVILLERYF 194
DA AA ++L+ +
Sbjct: 120 DAEAAAVILQGWL 132
>sp|A7MJR8|RUVX_CROS8 Putative Holliday junction resolvase OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=ESA_00393 PE=3 SV=1
Length = 138
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFCV--RPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPLT +K + + L+E +E + D+ I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRVTATARPLTAIKAQNGNPDWTLIEKLLKEWQPDDVIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R+ A RL R G +V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARTFANRLHGRF---GIKVTLHDERLSTVEARAGLFERGGFRALNKG 119
Query: 180 KTDAYAAVILLERYFSMSG 198
D+ +AV++LE YF G
Sbjct: 120 SVDSASAVVILESYFEQHG 138
>sp|B3EPT4|RUVX_CHLPB Putative Holliday junction resolvase OS=Chlorobium phaeobacteroides
(strain BS1) GN=Cphamn1_2429 PE=3 SV=1
Length = 144
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 66 LGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWDGS 125
L +D G RTGLA + FC V EK+ + Q ++ I+G P + DG+
Sbjct: 10 LAIDYGKKRTGLAKTDPFCSFAQPVGTFPPEKIITIIKSFLQENSVEKIIVGYPLNSDGT 69
Query: 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTK--TDA 183
+ P + + L+ AA V +DEH +S +A +I GLS+ RQ K D+
Sbjct: 70 KNPMTGIIDGFIEELS--AAFPDIPVEPIDEHGSSKQAGKVLIESGLSRKKRQRKGRLDS 127
Query: 184 YAAVILLERYFSMSG 198
AA +LL+ Y +G
Sbjct: 128 AAACLLLQHYLENTG 142
>sp|B4UH04|RUVX_ANASK Putative Holliday junction resolvase OS=Anaeromyxobacter sp.
(strain K) GN=AnaeK_2633 PE=3 SV=1
Length = 137
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 65 SLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKS 121
+LGVDLG R GLA++ R +T + R E +L + E+A+ E ++GLP +
Sbjct: 3 TLGVDLGRVRIGLAVADEILRTARAVTTVVRRTEAEDLSAIAEVARDYEVTRAVVGLPLN 62
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181
DG+E P + R A RL A G V L DE +S EA R+ GLS ++ +
Sbjct: 63 MDGTEGPSARLARGFAPRL---EAALGVPVELFDERLSSFEAESRLRARGLSAREQRGQV 119
Query: 182 DAYAAVILLERYF 194
DA AA ++L+ +
Sbjct: 120 DAEAAAVILQGWL 132
>sp|B7NI12|RUVX_ECO7I Putative Holliday junction resolvase OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GIEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q3YXS2|RUVX_SHISS Putative Holliday junction resolvase OS=Shigella sonnei (strain
Ss046) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q83JS4|RUVX_SHIFL Putative Holliday junction resolvase OS=Shigella flexneri GN=yqgF
PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q0T0U3|RUVX_SHIF8 Putative Holliday junction resolvase OS=Shigella flexneri serotype
5b (strain 8401) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q31WL1|RUVX_SHIBS Putative Holliday junction resolvase OS=Shigella boydii serotype 4
(strain Sb227) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B2U0W9|RUVX_SHIB3 Putative Holliday junction resolvase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7LPR6|RUVX_ESCF3 Putative Holliday junction resolvase OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=yqgF
PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B1LDF8|RUVX_ECOSM Putative Holliday junction resolvase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7N7K2|RUVX_ECOLU Putative Holliday junction resolvase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7LYX9|RUVX_ECO8A Putative Holliday junction resolvase OS=Escherichia coli O8 (strain
IAI1) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7UHZ6|RUVX_ECO27 Putative Holliday junction resolvase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|A7ZR72|RUVX_ECO24 Putative Holliday junction resolvase OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B8JDZ9|RUVX_ANAD2 Putative Holliday junction resolvase OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=A2cp1_2727
PE=3 SV=1
Length = 137
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 65 SLGVDLGLSRTGLALSKGF--CVRPLTVLKLRGEKLELQLL-EIAQREETDEFIIGLPKS 121
+LGVDLG R GLA++ R +T + R E +L + E+A+ E ++GLP +
Sbjct: 3 TLGVDLGRVRIGLAVADEILRTARAVTTVVRRTEAEDLAAIAEVARDYEVTRAVVGLPLN 62
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181
DG+E P + R A RL A G V L DE +S EA R+ GLS ++ +
Sbjct: 63 MDGTEGPSARLARGFAPRL---EAALGVPVELFDERLSSFEAESRLRARGLSAREQRGQV 119
Query: 182 DAYAAVILLERYF 194
DA AA ++L+ +
Sbjct: 120 DAEAAAVILQGWL 132
>sp|A9MQS7|RUVX_SALAR Putative Holliday junction resolvase OS=Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B5YQE7|RUVX_ECO5E Putative Holliday junction resolvase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KIDSASAVIILESYF 134
>sp|Q8XCV0|RUVX_ECO57 Putative Holliday junction resolvase OS=Escherichia coli O157:H7
GN=yqgF PE=3 SV=1
Length = 138
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KIDSASAVIILESYF 134
>sp|Q1R778|RUVX_ECOUT Putative Holliday junction resolvase OS=Escherichia coli (strain
UTI89 / UPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|P0A8I1|RUVX_ECOLI Putative Holliday junction resolvase OS=Escherichia coli (strain
K12) GN=yqgF PE=1 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B1IT58|RUVX_ECOLC Putative Holliday junction resolvase OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|P0A8I2|RUVX_ECOL6 Putative Holliday junction resolvase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q0TDQ2|RUVX_ECOL5 Putative Holliday junction resolvase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|A1AFD5|RUVX_ECOK1 Putative Holliday junction resolvase OS=Escherichia coli O1:K1 /
APEC GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|A8A489|RUVX_ECOHS Putative Holliday junction resolvase OS=Escherichia coli O9:H4
(strain HS) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B1XFA9|RUVX_ECODH Putative Holliday junction resolvase OS=Escherichia coli (strain
K12 / DH10B) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|C5A0L8|RUVX_ECOBW Putative Holliday junction resolvase OS=Escherichia coli (strain
K12 / MC4100 / BW2952) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7MZP8|RUVX_ECO81 Putative Holliday junction resolvase OS=Escherichia coli O81
(strain ED1a) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7LFL2|RUVX_ECO55 Putative Holliday junction resolvase OS=Escherichia coli (strain
55989 / EAEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B7MMD7|RUVX_ECO45 Putative Holliday junction resolvase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q8ZM50|RUVX_SALTY Putative Holliday junction resolvase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B4T5K4|RUVX_SALNS Putative Holliday junction resolvase OS=Salmonella newport (strain
SL254) GN=yqgF PE=3 SV=1
Length = 138
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + L+E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B5RE57|RUVX_SALG2 Putative Holliday junction resolvase OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPK 120
G S+GV +G TG A RPL +K + + L+E +E + DE I+GLP
Sbjct: 11 GTKSIGVAIGQRITGTA-------RPLPAIKAQDGTPDWMLIERLLKEWQPDEIIVGLPL 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTK 180
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K
Sbjct: 64 NMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGK 120
Query: 181 TDAYAAVILLERYF 194
D+ +AVI+LE YF
Sbjct: 121 VDSASAVIILESYF 134
>sp|B5QY73|RUVX_SALEP Putative Holliday junction resolvase OS=Salmonella enteritidis PT4
(strain P125109) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPK 120
G S+GV +G TG A RPL +K + + L+E +E + DE I+GLP
Sbjct: 11 GTKSIGVAIGQRITGTA-------RPLPAIKAQDGTPDWMLIERLLKEWQPDEIIVGLPL 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTK 180
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K
Sbjct: 64 NMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGK 120
Query: 181 TDAYAAVILLERYF 194
D+ +AVI+LE YF
Sbjct: 121 VDSASAVIILESYF 134
>sp|B5FUW0|RUVX_SALDC Putative Holliday junction resolvase OS=Salmonella dublin (strain
CT_02021853) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPK 120
G S+GV +G TG A RPL +K + + L+E +E + DE I+GLP
Sbjct: 11 GTKSIGVAIGQRITGTA-------RPLPAIKAQDGTPDWMLIERLLKEWQPDEIIVGLPL 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTK 180
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K
Sbjct: 64 NMDGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGK 120
Query: 181 TDAYAAVILLERYF 194
D+ +AVI+LE YF
Sbjct: 121 VDSASAVIILESYF 134
>sp|Q32C18|RUVX_SHIDS Putative Holliday junction resolvase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVDVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|B6I787|RUVX_ECOSE Putative Holliday junction resolvase OS=Escherichia coli (strain
SE11) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVDVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVILLERYF 194
K D+ +AVI+LE YF
Sbjct: 120 KVDSASAVIILESYF 134
>sp|Q8Z3V1|RUVX_SALTI Putative Holliday junction resolvase OS=Salmonella typhi GN=yqgF
PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|B4TV66|RUVX_SALSV Putative Holliday junction resolvase OS=Salmonella schwarzengrund
(strain CVM19633) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|B5BFQ4|RUVX_SALPK Putative Holliday junction resolvase OS=Salmonella paratyphi A
(strain AKU_12601) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|C0PY74|RUVX_SALPC Putative Holliday junction resolvase OS=Salmonella paratyphi C
(strain RKS4594) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|A9N4P3|RUVX_SALPB Putative Holliday junction resolvase OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|Q5PJJ7|RUVX_SALPA Putative Holliday junction resolvase OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|B4THI2|RUVX_SALHS Putative Holliday junction resolvase OS=Salmonella heidelberg
(strain SL476) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|Q57K19|RUVX_SALCH Putative Holliday junction resolvase OS=Salmonella choleraesuis
(strain SC-B67) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
>sp|B5F5M2|RUVX_SALA4 Putative Holliday junction resolvase OS=Salmonella agona (strain
SL483) GN=yqgF PE=3 SV=1
Length = 138
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
L D G G+A+ + RPL +K + + L+E +E + DE I+GLP +
Sbjct: 6 LAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNM 65
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E P + + R A R+ R G V L DE ++ EA + G ++ + K D
Sbjct: 66 DGTEQPLTARARKFANRIHGRF---GVTVTLHDERLSTVEARSGLFERGGYRALNKGKVD 122
Query: 183 AYAAVILLERYF 194
+ +AVI+LE YF
Sbjct: 123 SASAVIILESYF 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,848,707
Number of Sequences: 539616
Number of extensions: 3267598
Number of successful extensions: 7892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 402
Number of HSP's that attempted gapping in prelim test: 7421
Number of HSP's gapped (non-prelim): 542
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)