Query 026881
Match_columns 231
No_of_seqs 170 out of 1146
Neff 5.1
Searched_HMMs 29240
Date Tue Mar 26 00:31:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026881.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026881hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nu0_A Hypothetical protein YQ 100.0 2.1E-42 7.1E-47 282.6 10.2 132 62-196 2-136 (138)
2 1vhx_A Putative holliday junct 100.0 1.5E-38 5.1E-43 262.4 11.6 135 63-200 3-142 (150)
3 1iv0_A Hypothetical protein; r 100.0 2.1E-30 7.2E-35 200.5 10.0 94 64-161 2-98 (98)
4 4ep4_A Crossover junction endo 98.2 9.6E-06 3.3E-10 67.7 11.3 98 63-167 1-114 (166)
5 3bzc_A TEX; helix-turn-helix, 97.7 0.00023 7.7E-09 71.8 11.6 95 60-163 326-428 (785)
6 1hjr_A Holliday junction resol 97.5 0.00075 2.6E-08 55.6 10.8 97 63-166 1-109 (158)
7 3psf_A Transcription elongatio 96.9 0.0092 3.2E-07 61.8 12.8 87 63-160 519-626 (1030)
8 3psi_A Transcription elongatio 96.7 0.011 3.7E-07 62.3 12.5 87 63-160 516-623 (1219)
9 3vov_A Glucokinase, hexokinase 92.4 0.46 1.6E-05 41.4 8.3 100 64-167 2-118 (302)
10 3epq_A Putative fructokinase; 92.4 0.37 1.3E-05 42.2 7.7 99 63-167 3-117 (302)
11 3vgl_A Glucokinase; ROK family 92.3 0.16 5.6E-06 44.5 5.2 102 63-167 2-116 (321)
12 1saz_A Probable butyrate kinas 89.3 4.3 0.00015 36.6 11.9 92 63-158 2-131 (381)
13 2ch5_A NAGK protein; transfera 88.3 3.1 0.00011 36.1 10.0 94 64-163 7-117 (347)
14 3djc_A Type III pantothenate k 88.2 3.7 0.00013 35.8 10.4 82 63-156 2-91 (266)
15 2qm1_A Glucokinase; alpha-beta 87.2 0.92 3.1E-05 39.1 5.8 100 63-167 6-128 (326)
16 2e2o_A Hexokinase; acetate and 86.7 1.8 6E-05 37.0 7.3 90 64-165 3-104 (299)
17 2hoe_A N-acetylglucosamine kin 85.9 1.8 6.2E-05 38.7 7.2 102 62-167 86-208 (380)
18 4htl_A Beta-glucoside kinase; 85.4 2.3 7.7E-05 36.7 7.3 101 63-167 4-117 (297)
19 3r8e_A Hypothetical sugar kina 85.2 1.6 5.3E-05 38.1 6.3 101 62-167 18-138 (321)
20 2gel_A Putative GRAM negative 85.0 9.7 0.00033 32.2 11.0 85 64-155 2-93 (231)
21 2gup_A ROK family protein; sug 84.4 2.1 7E-05 36.5 6.5 95 64-165 5-112 (292)
22 2ap1_A Putative regulator prot 83.9 4.1 0.00014 35.3 8.3 97 63-165 24-138 (327)
23 3r6m_A YEAZ, resuscitation pro 83.6 10 0.00035 32.0 10.5 91 63-164 2-99 (213)
24 3htv_A D-allose kinase, alloki 82.1 2.5 8.4E-05 36.9 6.2 92 63-159 7-119 (310)
25 1z6r_A MLC protein; transcript 81.7 1.9 6.5E-05 38.7 5.5 101 62-167 84-206 (406)
26 3mcp_A Glucokinase; structural 80.5 5 0.00017 36.4 7.9 101 62-166 8-127 (366)
27 2a6a_A Hypothetical protein TM 80.2 12 0.0004 31.7 9.6 92 63-165 12-110 (218)
28 2aa4_A Mannac kinase, putative 80.2 4 0.00014 34.5 6.7 96 64-165 2-114 (289)
29 2ivn_A O-sialoglycoprotein end 79.3 18 0.00062 31.8 11.0 87 64-157 2-108 (330)
30 4db3_A Glcnac kinase, N-acetyl 77.6 11 0.00037 32.9 8.9 96 64-165 25-138 (327)
31 1z05_A Transcriptional regulat 77.2 2.6 8.8E-05 38.3 4.9 102 62-167 107-228 (429)
32 1woq_A Inorganic polyphosphate 76.9 6.6 0.00023 33.1 7.1 100 63-166 12-133 (267)
33 1sz2_A Glucokinase, glucose ki 73.6 11 0.00037 32.8 7.8 95 62-164 13-119 (332)
34 3lm2_A Putative kinase; struct 73.4 6.4 0.00022 33.4 6.1 58 63-120 6-64 (226)
35 2h3g_X Biosynthetic protein; p 72.6 33 0.0011 29.6 10.7 80 64-155 1-89 (268)
36 3eno_A Putative O-sialoglycopr 71.7 39 0.0013 29.9 11.2 87 62-155 5-111 (334)
37 2q2r_A Glucokinase 1, putative 69.9 10 0.00034 33.6 6.8 77 41-121 11-100 (373)
38 2yhw_A Bifunctional UDP-N-acet 68.3 8.9 0.0003 33.4 6.0 98 63-166 30-150 (343)
39 2bdq_A Copper homeostasis prot 68.0 19 0.00063 31.1 7.8 61 105-174 84-149 (224)
40 3h1q_A Ethanolamine utilizatio 65.3 35 0.0012 28.1 9.0 64 62-125 27-106 (272)
41 1dkg_D Molecular chaperone DNA 65.2 2.5 8.7E-05 37.2 1.9 19 63-81 2-20 (383)
42 1yuw_A Heat shock cognate 71 k 64.2 3.7 0.00013 38.9 2.9 21 61-81 2-22 (554)
43 1twd_A Copper homeostasis prot 63.8 22 0.00074 31.3 7.5 61 105-174 81-144 (256)
44 1zbs_A Hypothetical protein PG 63.3 52 0.0018 27.8 9.9 87 64-160 1-101 (291)
45 3i33_A Heat shock-related 70 k 61.1 4 0.00014 36.2 2.4 20 62-81 22-41 (404)
46 4gni_A Putative heat shock pro 61.0 5 0.00017 35.7 3.1 19 63-81 13-31 (409)
47 3qfu_A 78 kDa glucose-regulate 60.9 4.7 0.00016 35.4 2.8 19 63-81 18-36 (394)
48 3kht_A Response regulator; PSI 60.3 42 0.0014 24.1 7.6 89 100-197 41-133 (144)
49 3qze_A DHDPS, dihydrodipicolin 60.0 28 0.00095 30.7 7.7 97 66-169 9-113 (314)
50 3en9_A Glycoprotease, O-sialog 59.0 71 0.0024 29.8 10.7 87 63-156 6-111 (540)
51 2qxy_A Response regulator; reg 58.6 38 0.0013 24.2 7.1 85 100-197 38-122 (142)
52 2ych_A Competence protein PILM 58.4 39 0.0013 29.4 8.3 58 63-120 13-85 (377)
53 4b9q_A Chaperone protein DNAK; 57.9 6.2 0.00021 37.9 3.3 19 63-81 2-20 (605)
54 3bex_A Type III pantothenate k 57.8 62 0.0021 27.5 9.3 57 63-119 3-65 (249)
55 3lyh_A Cobalamin (vitamin B12) 57.6 45 0.0015 24.8 7.6 56 112-174 7-64 (126)
56 1jmv_A USPA, universal stress 56.4 29 0.00099 25.2 6.2 50 97-156 89-138 (141)
57 4e7p_A Response regulator; DNA 53.7 60 0.0021 23.5 7.6 85 100-196 56-140 (150)
58 2yhx_A Hexokinase B; transfera 52.3 7.1 0.00024 36.7 2.6 20 62-81 60-79 (457)
59 1tq8_A Hypothetical protein RV 50.6 31 0.0011 26.4 5.8 53 97-156 106-158 (163)
60 2kho_A Heat shock protein 70; 50.5 7.4 0.00025 37.3 2.5 19 63-81 2-20 (605)
61 2v7y_A Chaperone protein DNAK; 49.8 9.8 0.00034 35.4 3.1 19 63-81 2-20 (509)
62 1mjh_A Protein (ATP-binding do 48.6 25 0.00085 26.3 4.8 54 97-157 107-160 (162)
63 3b2n_A Uncharacterized protein 48.5 69 0.0024 22.6 8.1 63 101-174 40-102 (133)
64 3gi1_A LBP, laminin-binding pr 48.2 35 0.0012 29.5 6.3 43 126-172 210-252 (286)
65 1zc6_A Probable N-acetylglucos 47.8 35 0.0012 29.0 6.2 18 64-81 12-29 (305)
66 3hdg_A Uncharacterized protein 47.4 72 0.0024 22.5 8.6 85 100-196 41-125 (137)
67 4ehu_A Activator of 2-hydroxyi 45.5 35 0.0012 28.5 5.7 19 63-81 1-19 (276)
68 3eul_A Possible nitrate/nitrit 44.9 85 0.0029 22.7 8.3 85 100-196 51-135 (152)
69 3cz5_A Two-component response 44.8 86 0.0029 22.7 8.9 77 100-187 41-118 (153)
70 3ifr_A Carbohydrate kinase, FG 44.2 1.1E+02 0.0037 28.3 9.4 20 62-81 6-25 (508)
71 2gm3_A Unknown protein; AT3G01 44.1 47 0.0016 25.2 5.8 54 97-157 111-164 (175)
72 2z08_A Universal stress protei 44.0 27 0.00093 25.4 4.3 23 97-119 86-108 (137)
73 2dum_A Hypothetical protein PH 43.3 30 0.001 26.1 4.6 56 97-159 104-159 (170)
74 1zxo_A Conserved hypothetical 43.1 27 0.00093 29.7 4.7 85 65-159 2-98 (291)
75 3f6c_A Positive transcription 42.9 68 0.0023 22.4 6.2 61 103-174 39-99 (134)
76 2o1e_A YCDH; alpha-beta protei 41.8 39 0.0013 29.7 5.6 44 126-173 221-264 (312)
77 3iwp_A Copper homeostasis prot 41.0 87 0.003 27.8 7.7 63 103-174 117-182 (287)
78 3d2f_A Heat shock protein homo 40.2 14 0.00049 36.1 2.7 19 63-81 2-20 (675)
79 3cx3_A Lipoprotein; zinc-bindi 40.1 50 0.0017 28.3 6.0 44 126-173 208-251 (284)
80 1toa_A Tromp-1, protein (perip 39.9 47 0.0016 29.1 5.8 44 126-173 228-276 (313)
81 3hzh_A Chemotaxis response reg 39.2 1.1E+02 0.0038 22.3 8.0 63 101-174 72-136 (157)
82 2jk1_A HUPR, hydrogenase trans 39.0 1E+02 0.0035 21.8 7.1 63 101-173 35-97 (139)
83 3qk7_A Transcriptional regulat 38.6 1.4E+02 0.0049 24.3 8.4 83 100-197 55-152 (294)
84 3hh8_A Metal ABC transporter s 38.2 76 0.0026 27.5 6.9 44 126-173 214-257 (294)
85 3gv0_A Transcriptional regulat 38.2 1.3E+02 0.0045 24.4 8.1 82 100-196 56-152 (288)
86 3fg9_A Protein of universal st 37.9 19 0.00067 26.8 2.6 23 97-119 105-128 (156)
87 3hgm_A Universal stress protei 37.9 27 0.00092 25.4 3.4 23 97-119 97-119 (147)
88 3s3t_A Nucleotide-binding prot 37.9 34 0.0012 24.9 4.0 23 97-119 94-117 (146)
89 1qkk_A DCTD, C4-dicarboxylate 37.8 91 0.0031 22.6 6.4 63 101-174 38-100 (155)
90 2xws_A Sirohydrochlorin cobalt 37.7 68 0.0023 23.7 5.7 51 112-167 5-58 (133)
91 3tnj_A Universal stress protei 37.7 38 0.0013 24.8 4.3 51 97-155 96-146 (150)
92 3tb6_A Arabinose metabolism tr 37.6 1.3E+02 0.0043 24.2 7.8 85 101-196 62-161 (298)
93 2qsj_A DNA-binding response re 37.4 1.1E+02 0.0039 21.9 7.7 85 100-196 39-124 (154)
94 4a2a_A Cell division protein F 37.1 1.2E+02 0.0042 27.4 8.4 59 63-121 8-86 (419)
95 3fdx_A Putative filament prote 37.1 75 0.0026 22.9 5.8 23 97-119 93-115 (143)
96 3eod_A Protein HNR; response r 36.2 1.1E+02 0.0037 21.3 8.5 63 101-174 42-104 (130)
97 3i8b_A Xylulose kinase; strain 36.2 2.2E+02 0.0075 26.4 10.1 55 63-117 5-71 (515)
98 2f9w_A Pantothenate kinase; CO 35.8 1.5E+02 0.005 25.7 8.3 80 63-143 23-133 (271)
99 2zay_A Response regulator rece 35.8 1.2E+02 0.004 21.6 8.4 84 101-196 43-128 (147)
100 2prs_A High-affinity zinc upta 35.8 50 0.0017 28.3 5.2 43 126-172 205-247 (284)
101 3ezx_A MMCP 1, monomethylamine 35.6 1.9E+02 0.0063 23.8 9.2 96 86-194 119-215 (215)
102 2dpn_A Glycerol kinase; thermu 35.5 1E+02 0.0034 28.4 7.6 19 63-81 2-20 (495)
103 2qr3_A Two-component system re 35.5 1.1E+02 0.0039 21.3 6.9 87 100-196 37-126 (140)
104 3mfq_A TROA, high-affinity zin 35.5 1E+02 0.0035 26.4 7.2 43 127-173 195-240 (282)
105 1kcf_A Hypothetical 30.2 KD pr 35.0 23 0.00078 31.0 2.9 62 63-124 40-124 (258)
106 3jte_A Response regulator rece 34.7 1.2E+02 0.0041 21.4 8.3 61 103-174 40-102 (143)
107 3ll3_A Gluconate kinase; xylul 34.7 65 0.0022 29.9 6.2 20 62-81 3-22 (504)
108 1srr_A SPO0F, sporulation resp 34.1 1.1E+02 0.0039 20.9 9.4 61 102-173 39-99 (124)
109 3kki_A CAI-1 autoinducer synth 34.1 79 0.0027 27.3 6.3 54 98-160 174-227 (409)
110 3gl9_A Response regulator; bet 34.0 1.2E+02 0.004 21.1 7.5 64 101-173 37-100 (122)
111 3g25_A Glycerol kinase; IDP007 33.7 94 0.0032 28.6 7.1 19 63-81 6-24 (501)
112 1pq4_A Periplasmic binding pro 33.1 67 0.0023 27.7 5.7 44 126-173 219-262 (291)
113 3cet_A Conserved archaeal prot 32.9 1.8E+02 0.006 26.4 8.5 92 64-165 1-104 (334)
114 2q6t_A DNAB replication FORK h 32.7 93 0.0032 28.1 6.8 59 98-156 298-361 (444)
115 3t6k_A Response regulator rece 32.6 1.3E+02 0.0045 21.3 9.0 64 101-173 39-102 (136)
116 3ujp_A Mn transporter subunit; 32.4 62 0.0021 28.4 5.4 44 126-173 221-264 (307)
117 3cnb_A DNA-binding response re 32.2 1.3E+02 0.0044 21.0 8.3 88 100-197 44-131 (143)
118 2r6a_A DNAB helicase, replicat 31.6 84 0.0029 28.5 6.3 58 99-156 302-362 (454)
119 1xvl_A Mn transporter, MNTC pr 31.5 68 0.0023 28.2 5.5 44 126-173 235-278 (321)
120 3g0t_A Putative aminotransfera 31.3 1.3E+02 0.0046 25.8 7.3 56 98-159 170-225 (437)
121 3grc_A Sensor protein, kinase; 31.3 1.4E+02 0.0047 21.0 7.7 89 100-197 40-128 (140)
122 2ekc_A AQ_1548, tryptophan syn 30.8 95 0.0033 26.3 6.2 55 98-154 32-100 (262)
123 1hux_A Activator of (R)-2-hydr 30.6 1.2E+02 0.0043 25.5 6.9 19 64-82 4-22 (270)
124 1dbw_A Transcriptional regulat 30.2 1.4E+02 0.0046 20.7 7.4 63 101-174 38-100 (126)
125 2d4w_A Glycerol kinase; alpha 30.2 1.1E+02 0.0038 28.2 6.9 19 63-81 2-20 (504)
126 3hv2_A Response regulator/HD d 30.2 1.5E+02 0.0053 21.3 10.8 65 100-174 48-112 (153)
127 3dlo_A Universal stress protei 30.0 33 0.0011 26.0 2.8 24 96-119 103-126 (155)
128 3k4h_A Putative transcriptiona 29.9 1.7E+02 0.006 23.4 7.4 82 100-196 59-156 (292)
129 1q57_A DNA primase/helicase; d 29.7 1.2E+02 0.004 27.8 7.0 59 98-156 342-402 (503)
130 2p3r_A Glycerol kinase; glycer 29.7 1.1E+02 0.0039 28.3 6.9 19 63-81 3-21 (510)
131 1b5f_B Protein (cardosin A); h 29.5 41 0.0014 23.4 3.0 18 63-80 69-86 (87)
132 2zf5_O Glycerol kinase; hypert 29.5 1.2E+02 0.0041 27.9 7.0 19 63-81 3-21 (497)
133 3f9t_A TDC, L-tyrosine decarbo 28.9 1.8E+02 0.0062 24.1 7.6 53 98-159 159-211 (397)
134 1tmy_A CHEY protein, TMY; chem 28.9 1.4E+02 0.0047 20.3 7.6 61 102-173 39-99 (120)
135 3r0j_A Possible two component 28.7 2.2E+02 0.0075 22.6 7.8 77 101-188 58-135 (250)
136 3crn_A Response regulator rece 28.7 1.5E+02 0.0052 20.7 7.9 63 101-174 38-100 (132)
137 3mdq_A Exopolyphosphatase; str 28.5 2.4E+02 0.0081 24.5 8.5 83 63-155 4-110 (315)
138 3o74_A Fructose transport syst 28.4 2.2E+02 0.0074 22.5 8.5 84 101-198 49-147 (272)
139 2itm_A Xylulose kinase, xylulo 28.2 1.6E+02 0.0056 26.8 7.7 17 65-81 2-18 (484)
140 1tjn_A Sirohydrochlorin cobalt 27.7 1.2E+02 0.0039 23.7 5.7 52 111-167 25-79 (156)
141 2xwp_A Sirohydrochlorin cobalt 27.7 1.8E+02 0.0063 24.4 7.4 56 112-174 4-76 (264)
142 3huu_A Transcription regulator 27.6 2.5E+02 0.0085 22.9 8.1 44 100-158 73-116 (305)
143 2pl1_A Transcriptional regulat 27.4 1.5E+02 0.005 20.1 8.5 62 101-173 35-96 (121)
144 3e61_A Putative transcriptiona 27.4 2.3E+02 0.008 22.5 7.8 42 100-158 54-96 (277)
145 3bgw_A DNAB-like replicative h 27.3 1.5E+02 0.005 27.1 7.2 59 98-156 296-358 (444)
146 3gt7_A Sensor protein; structu 27.1 1.8E+02 0.0061 21.1 8.2 89 100-198 41-129 (154)
147 3nkl_A UDP-D-quinovosamine 4-d 27.1 83 0.0029 23.1 4.6 46 100-156 55-100 (141)
148 3nra_A Aspartate aminotransfer 27.0 1.9E+02 0.0065 24.4 7.4 56 98-160 168-223 (407)
149 2xvy_A Chelatase, putative; me 27.0 1.7E+02 0.0057 24.4 7.0 55 112-173 11-80 (269)
150 3cfy_A Putative LUXO repressor 26.9 1.7E+02 0.0058 20.7 7.7 62 101-173 39-100 (137)
151 3dzz_A Putative pyridoxal 5'-p 26.7 95 0.0033 26.1 5.4 56 98-159 148-203 (391)
152 1t6c_A Exopolyphosphatase; alp 26.1 2.7E+02 0.0091 24.2 8.4 93 63-167 12-127 (315)
153 3h6e_A Carbohydrate kinase, FG 25.9 1.5E+02 0.0053 27.4 7.1 56 63-118 6-76 (482)
154 3rqi_A Response regulator prot 25.7 1.6E+02 0.0055 22.3 6.2 61 101-172 42-102 (184)
155 3loq_A Universal stress protei 25.7 1.7E+02 0.0059 23.9 6.8 52 97-156 238-290 (294)
156 2uyt_A Rhamnulokinase; rhamnos 25.5 43 0.0015 30.7 3.1 21 61-81 2-22 (489)
157 3f6p_A Transcriptional regulat 25.5 1.7E+02 0.0057 20.1 6.8 61 101-173 37-97 (120)
158 3i42_A Response regulator rece 25.4 1.3E+02 0.0045 20.7 5.2 53 100-160 37-89 (127)
159 1jce_A ROD shape-determining p 25.4 38 0.0013 29.1 2.6 18 64-81 4-21 (344)
160 2w40_A Glycerol kinase, putati 25.3 1.2E+02 0.0042 27.8 6.3 19 63-81 4-22 (503)
161 3rjt_A Lipolytic protein G-D-S 25.2 1.8E+02 0.0061 21.9 6.4 54 100-155 120-173 (216)
162 3kax_A Aminotransferase, class 25.0 1.9E+02 0.0065 24.1 7.0 55 98-159 145-199 (383)
163 3h5t_A Transcriptional regulat 24.9 2.3E+02 0.0078 23.9 7.6 60 99-173 117-190 (366)
164 1q77_A Hypothetical protein AQ 24.7 64 0.0022 23.2 3.5 22 97-118 96-117 (138)
165 3cu5_A Two component transcrip 24.6 1.1E+02 0.0039 21.8 4.9 49 101-159 40-88 (141)
166 1qop_A Tryptophan synthase alp 24.5 1.2E+02 0.0042 25.6 5.7 53 99-153 33-99 (268)
167 3l8a_A METC, putative aminotra 24.5 1.5E+02 0.0051 25.7 6.4 56 98-159 182-237 (421)
168 3a2b_A Serine palmitoyltransfe 24.5 1.6E+02 0.0055 25.0 6.5 53 99-160 159-214 (398)
169 3tva_A Xylose isomerase domain 24.3 2.9E+02 0.0098 22.5 10.0 71 100-171 105-175 (290)
170 3bh0_A DNAB-like replicative h 24.3 1.6E+02 0.0056 25.2 6.6 60 98-157 167-230 (315)
171 1k68_A Phytochrome response re 24.2 1.8E+02 0.0061 20.0 8.6 78 109-195 54-134 (140)
172 1d2f_A MALY protein; aminotran 24.1 1.1E+02 0.0039 25.9 5.5 56 98-159 150-205 (390)
173 3kcn_A Adenylate cyclase homol 24.0 2E+02 0.0069 20.6 8.6 63 101-173 38-101 (151)
174 2rjn_A Response regulator rece 24.0 2E+02 0.0069 20.6 9.6 65 100-174 41-105 (154)
175 1ivn_A Thioesterase I; hydrola 23.3 2.2E+02 0.0075 21.4 6.5 22 100-121 52-73 (190)
176 3piu_A 1-aminocyclopropane-1-c 23.3 1.8E+02 0.0061 25.3 6.7 56 99-160 175-235 (435)
177 2zyj_A Alpha-aminodipate amino 23.3 1.8E+02 0.006 24.8 6.5 57 98-160 150-207 (397)
178 3cg0_A Response regulator rece 23.1 1.9E+02 0.0066 20.0 7.9 63 101-174 45-107 (140)
179 3hz6_A Xylulokinase; xylulose, 22.9 1.5E+02 0.0051 27.4 6.4 20 62-81 4-23 (511)
180 4e1j_A Glycerol kinase; struct 22.4 1.7E+02 0.0059 27.1 6.7 19 63-81 26-44 (520)
181 3olq_A Universal stress protei 22.4 1.7E+02 0.0058 24.2 6.1 52 97-155 253-304 (319)
182 1eo1_A Hypothetical protein MT 22.3 1.9E+02 0.0065 21.2 5.8 54 101-172 56-109 (124)
183 4dad_A Putative pilus assembly 22.2 1.3E+02 0.0046 21.3 4.8 84 101-196 57-141 (146)
184 3euc_A Histidinol-phosphate am 22.1 2.5E+02 0.0084 23.4 7.2 56 98-159 145-202 (367)
185 3h3n_X Glycerol kinase; ATP-bi 21.8 1.5E+02 0.0053 27.2 6.2 19 63-81 5-23 (506)
186 3vzx_A Heptaprenylglyceryl pho 21.6 1E+02 0.0035 26.2 4.6 38 106-153 27-64 (228)
187 1c7n_A Cystalysin; transferase 21.5 1.4E+02 0.0046 25.4 5.4 55 99-159 153-207 (399)
188 2w8t_A SPT, serine palmitoyltr 21.3 1.2E+02 0.004 26.5 5.1 53 99-160 180-235 (427)
189 1iay_A ACC synthase 2, 1-amino 21.1 1.9E+02 0.0066 24.9 6.4 56 99-160 172-232 (428)
190 3mm4_A Histidine kinase homolo 21.1 2.9E+02 0.01 21.4 8.5 75 109-195 118-195 (206)
191 3hi0_A Putative exopolyphospha 21.0 3.5E+02 0.012 25.2 8.6 92 63-167 15-130 (508)
192 1mvo_A PHOP response regulator 21.0 2.1E+02 0.0073 19.7 6.4 82 102-195 39-120 (136)
193 3hdv_A Response regulator; PSI 20.7 2.2E+02 0.0074 19.8 6.9 84 103-197 44-128 (136)
194 3l0q_A Xylulose kinase; xlylul 20.7 1.9E+02 0.0066 26.9 6.7 20 62-81 4-23 (554)
195 3egc_A Putative ribose operon 20.6 2.7E+02 0.0092 22.3 6.9 82 100-196 54-150 (291)
196 3cq5_A Histidinol-phosphate am 20.6 2.9E+02 0.01 23.2 7.3 53 99-160 153-205 (369)
197 2yvt_A Hypothetical protein AQ 20.4 2.3E+02 0.0079 22.5 6.4 19 99-117 21-39 (260)
198 3jy6_A Transcriptional regulat 20.3 2.6E+02 0.0087 22.3 6.7 43 100-158 53-95 (276)
199 1k66_A Phytochrome response re 20.2 2.3E+02 0.0078 19.7 8.5 79 109-196 61-142 (149)
200 3md9_A Hemin-binding periplasm 20.1 2.5E+02 0.0087 22.5 6.6 49 107-170 56-104 (255)
No 1
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=100.00 E-value=2.1e-42 Score=282.59 Aligned_cols=132 Identities=30% Similarity=0.438 Sum_probs=114.7
Q ss_pred CceEEEEecCCCeEEEEEecC--ceeeeeeeeeccc-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHH
Q 026881 62 GGFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAG 138 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~ 138 (231)
++++||||||+||||||+||. .+|+|+++|.+++ ...+.+|.+++++|+++.||||+|++|||+++++++++++|++
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~ 81 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFAN 81 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEEEcCCCCEEeeEEEEEcCCcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHH
Confidence 358999999999999999995 5899999997643 3468999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCCcHHHHHHHHHHHHcc
Q 026881 139 RLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 139 ~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~vD~lAA~IILq~yLd~ 196 (231)
+|++++ ++||++||||+||.+|++.|++.+.+++++|+.+|++||++|||+||+.
T Consensus 82 ~L~~~~---~lpV~~~DERlTT~~A~~~l~~~~~~~~~~k~~iD~~AA~iILq~yLd~ 136 (138)
T 1nu0_A 82 RIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYMEQ 136 (138)
T ss_dssp HHHHHH---CCCEEEEEEECCCCCC-------CCCCCCCHHHHTTHHHHHHHHHHHHT
T ss_pred HHHHHh---CCCEEEEcCCcCHHHHHHHHHHhcCcccccCcchhHHHHHHHHHHHHhc
Confidence 999875 7999999999999999999999777777778889999999999999986
No 2
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=100.00 E-value=1.5e-38 Score=262.44 Aligned_cols=135 Identities=27% Similarity=0.403 Sum_probs=123.9
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeeccc---hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG---EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVA 137 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~---~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa 137 (231)
+++||||||++|||+|++|. .+++|+.+|...+ ...+..|.+++++|+|+.||||+|++|||+.+.++.+++.|+
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~p~~~I~~~~~r~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~ 82 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFA 82 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHH
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEeeEEEEEcCCcchHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHH
Confidence 47999999999999999994 5799999997543 346789999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCCcHHHHHHHHHHHHcccCCC
Q 026881 138 GRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTDAYAAVILLERYFSMSGQG 200 (231)
Q Consensus 138 ~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~vD~lAA~IILq~yLd~~~~~ 200 (231)
..|..++ ++||++|||||||.+|++.|++.|++++++|+.+|++||++|||+||+...++
T Consensus 83 ~~L~~~~---~lpV~~vDEr~Ts~~Ak~~l~~~g~~r~~~k~~iD~~AA~iILq~~L~~~~~~ 142 (150)
T 1vhx_A 83 KVLETTY---NVPVVLWDERLTTMAAEKMLIAADVSRQKRKKVIDKMAAVMILQGYLDSLNEG 142 (150)
T ss_dssp HHHHHHH---CSCEEEECCSSCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHhh---CCCEEEecCCCCHHHHHHHHHHcCCcccccCccHhHHHHHHHHHHHHhccccc
Confidence 9999874 89999999999999999999999999998899999999999999999987554
No 3
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=99.97 E-value=2.1e-30 Score=200.52 Aligned_cols=94 Identities=30% Similarity=0.333 Sum_probs=86.5
Q ss_pred eEEEEecCCCeEEEEEecC--ceeeeeeeeeccc-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHH
Q 026881 64 FSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRL 140 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L 140 (231)
++||||||+||||||+||. .+|+|+++|.+++ ...+.+|.+++++|+++.||||+|++|||+++++++++++|+++|
T Consensus 2 riLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L 81 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEAL 81 (98)
T ss_dssp CEEEEEESSSEEEEEEECSCCSSCCCEEEEECCCHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHH
T ss_pred cEEEEEeCCCEEEEEEEeCCCCeeeeeEEEEccCcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHH
Confidence 6999999999999999995 5899999997543 457789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCcEEEecCCCcHH
Q 026881 141 AVRAAERGWRVYLLDEHRTSA 161 (231)
Q Consensus 141 ~~~~~~~~lpV~lvDER~TT~ 161 (231)
+++ ++||++||||+||.
T Consensus 82 ~~~----~lpV~~~DERlTT~ 98 (98)
T 1iv0_A 82 RAR----GVEVELWDERFTTK 98 (98)
T ss_dssp HHT----TCEEEEECCSCCCC
T ss_pred hcC----CCCEEEECCCCCCC
Confidence 874 69999999999983
No 4
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=98.24 E-value=9.6e-06 Score=67.71 Aligned_cols=98 Identities=17% Similarity=0.192 Sum_probs=66.6
Q ss_pred ceEEEEecCCCeEEEEEec--Cc---eeeee--eeeeccc--------hhHHHHHHHHHHHcCCCEEEEeecC-CCCCCC
Q 026881 63 GFSLGVDLGLSRTGLALSK--GF---CVRPL--TVLKLRG--------EKLELQLLEIAQREETDEFIIGLPK-SWDGSE 126 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~~---~A~Pl--~~i~~~~--------~~~~~~L~~li~e~~i~~IVVGLPl-~~dGt~ 126 (231)
++|||||+|..++|+++.| +. ..+.+ .+|.... ....+.|.+++++|+++.++|--|+ +.|.+.
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~s 80 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNEL 80 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCCSSCSHH
T ss_pred CEEEEEccccCceEEEEEEecCCccceEEEEEeCeEECCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeehhhccChHH
Confidence 3799999999999999987 32 33333 5665432 2345789999999999999999998 444444
Q ss_pred ChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 127 TPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 127 s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
.-..-+++-.+.....+ .++||+.+ |..+.++..
T Consensus 81 al~lgqarGv~~la~~~---~glpv~ey----tP~~vKkav 114 (166)
T 4ep4_A 81 AYKVGWALGAVLVAAFE---AGVPVYAY----GPMQVKQAL 114 (166)
T ss_dssp HHHHHHHHHHHHHHHHH---HTCCEEEE----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---cCCCEEEE----CHHHHHHHh
Confidence 33344455555444333 48999875 666665554
No 5
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=97.69 E-value=0.00023 Score=71.84 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=67.2
Q ss_pred CCCceEEEEecC-CCeEEEEEecCc--eeeeeeee-ecc--c--hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHH
Q 026881 60 WRGGFSLGVDLG-LSRTGLALSKGF--CVRPLTVL-KLR--G--EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSN 131 (231)
Q Consensus 60 ~~~g~iLglD~G-~kRIGvAvsD~~--~A~Pl~~i-~~~--~--~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~ 131 (231)
+++.++||+|+| +.-|.+|+.|.. .. -..+| +.. + ......|.+++.+++|+.|+|| +||.| +
T Consensus 326 ~~~~~vlg~dpg~r~g~k~a~vd~~G~~l-~~~~iy~~~~~~~~~~~~~~l~~li~~~~~~~IaIG-----ngtas---r 396 (785)
T 3bzc_A 326 AGPRATLGLDPGLRTGVKVAVVDATGKLL-DTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIG-----NGTAS---R 396 (785)
T ss_dssp CCSCCEEEEECCSSSCEEEEEECTTSCEE-EEEEECCSGGGCCHHHHHHHHHHHHHHHTCCEEEEE-----SSTTH---H
T ss_pred CCCCeEEEECCCCcCceEEEEECCCCCEE-EEEEEecCCchhHHHHHHHHHHHHHHHcCCCEEEEC-----CCccC---H
Confidence 445689999999 577889999942 21 11222 111 1 2355789999999999999999 88876 5
Q ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCcHHHH
Q 026881 132 KVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163 (231)
Q Consensus 132 ~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA 163 (231)
..++|...|.+..+...+++++++|..++.-.
T Consensus 397 et~~~v~~l~~~~~~~~i~~v~v~e~gArvy~ 428 (785)
T 3bzc_A 397 ETDKLAGELIKKYPGMKLTKIMVSEAGASVYS 428 (785)
T ss_dssp HHHHHHHHHHHHCGGGCCEEEEECCHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCCEEEEcCCcCCHHH
Confidence 56677777765543236899999998876543
No 6
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=97.53 E-value=0.00075 Score=55.59 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=59.8
Q ss_pred ceEEEEecCCCeEEEEEec--Ccee--eeeeeeeccc-------hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCh-hH
Q 026881 63 GFSLGVDLGLSRTGLALSK--GFCV--RPLTVLKLRG-------EKLELQLLEIAQREETDEFIIGLPKSWDGSETP-QS 130 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~~~A--~Pl~~i~~~~-------~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~-~~ 130 (231)
.+|||||+|..++|+++.+ +... --..+|.... ......|.+++++|+++.++|=-++--.+..+. ..
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~~~~~~~Rl~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~l 80 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKL 80 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHH
T ss_pred CEEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHH
Confidence 3799999999999999997 3211 2234554331 124567899999999999999999854333321 11
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHH
Q 026881 131 NKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDR 166 (231)
Q Consensus 131 ~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~ 166 (231)
-+++-.+-... ...++||..+ |..+.++.
T Consensus 81 gqarGv~~~a~---~~~~ipv~ey----tp~~vKka 109 (158)
T 1hjr_A 81 GQARGVAIVAA---VNQELPVFEY----AARQVKQT 109 (158)
T ss_dssp HHHHHHHHHHH---HTTTCCEEEE----EHHHHHHH
T ss_pred HHHHHHHHHHH---HHcCCCEEEE----CHHHHHHH
Confidence 22222222222 2358999875 55555444
No 7
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.0092 Score=61.83 Aligned_cols=87 Identities=15% Similarity=0.049 Sum_probs=56.0
Q ss_pred ceEEEEecCCCe-----EEEEEecC--ceeeeeeee-----ecc-chhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChh
Q 026881 63 GFSLGVDLGLSR-----TGLALSKG--FCVRPLTVL-----KLR-GEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQ 129 (231)
Q Consensus 63 g~iLglD~G~kR-----IGvAvsD~--~~A~Pl~~i-----~~~-~~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~ 129 (231)
.++||||+|-.. |-+|+.|. -.. -..+| ..+ ..+....|.+++..++|+.|+|| +|+.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l-~~~~i~~~~~~~~~~~~~~~~l~~li~~~~~~~IaIG-----n~s~--- 589 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFI-RDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGIN-----GPNP--- 589 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEE-EEEEECSCTTCSSCCHHHHHHHHHHHHHHCCSEEEEC-----CSST---
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEE-EEEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEEC-----CCCH---
Confidence 489999999753 77788883 221 11222 111 13345789999999999999999 6543
Q ss_pred HHHHHHHHHHHHHHhc--------cCCCcEEEecCCCcH
Q 026881 130 SNKVRSVAGRLAVRAA--------ERGWRVYLLDEHRTS 160 (231)
Q Consensus 130 ~~~v~~Fa~~L~~~~~--------~~~lpV~lvDER~TT 160 (231)
..++|.+.+...+. ..+++|++|||..-|
T Consensus 590 --et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAs 626 (1030)
T 3psf_A 590 --KTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAI 626 (1030)
T ss_dssp --HHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHH
T ss_pred --HHHHHHHHHHHHHHhhccccccCCCccEEEecchHHH
Confidence 33444444433211 125899999999844
No 8
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.011 Score=62.29 Aligned_cols=87 Identities=15% Similarity=0.048 Sum_probs=56.4
Q ss_pred ceEEEEecCCCe-----EEEEEecC--ceeeeeeee-----ecc-chhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChh
Q 026881 63 GFSLGVDLGLSR-----TGLALSKG--FCVRPLTVL-----KLR-GEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQ 129 (231)
Q Consensus 63 g~iLglD~G~kR-----IGvAvsD~--~~A~Pl~~i-----~~~-~~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~ 129 (231)
.++||||+|... |-+|+.|. -.. -..+| ..+ ..+....|.+++..++|+.|+|| +|+
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl-~~~~i~~~~~~~~~~~~a~~~l~~li~~~~~~vIaIG-----n~s---- 585 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFI-RDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGIN-----GPN---- 585 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEE-EEEEECSCTTCSSCSHHHHHHHHHHHHHHCCSEEEEC-----CSS----
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEE-EEEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEEC-----CCC----
Confidence 489999999863 67788883 221 11222 111 13345789999999999999999 654
Q ss_pred HHHHHHHHHHHHHHhc--------cCCCcEEEecCCCcH
Q 026881 130 SNKVRSVAGRLAVRAA--------ERGWRVYLLDEHRTS 160 (231)
Q Consensus 130 ~~~v~~Fa~~L~~~~~--------~~~lpV~lvDER~TT 160 (231)
+..++|.+.|...+. ..+++|++|||..-|
T Consensus 586 -ret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAs 623 (1219)
T 3psi_A 586 -PKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAI 623 (1219)
T ss_dssp -THHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHH
T ss_pred -HHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHH
Confidence 234455444433211 135899999999844
No 9
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=92.43 E-value=0.46 Score=41.38 Aligned_cols=100 Identities=20% Similarity=0.239 Sum_probs=58.0
Q ss_pred eEEEEecCCCeEEEEEecCceeeeeeeeecc---chhHHHHHHHHHH----H--cCCCEEEEeecCCCCCCCChh-----
Q 026881 64 FSLGVDLGLSRTGLALSKGFCVRPLTVLKLR---GEKLELQLLEIAQ----R--EETDEFIIGLPKSWDGSETPQ----- 129 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~~~A~Pl~~i~~~---~~~~~~~L~~li~----e--~~i~~IVVGLPl~~dGt~s~~----- 129 (231)
.++|||+|..+|-+++.|.....-...++.. .+...+.|.++++ + .++.+|.||.|=..|...+..
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~ 81 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKRLLSKVVVPTPKEGGERVAEALAEAAERAEREAGVRGEAIGLGTPGPLDFRRGVIRFAPN 81 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSSBSCCEEEECCSSCHHHHHHHHHHHHHHHHHHHTCCCSSEEEEESSCEETTTTEEC---C
T ss_pred EEEEEEEcCCEEEEEEEeCCCcEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccCCceEEEEEecccEeCCCCEEEcCCC
Confidence 6899999999999999993211011122211 1233344444443 2 579999999995433211100
Q ss_pred ---HHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 130 ---SNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 130 ---~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
... ..+.+.|++++ ++||++.+.-.....|+..+
T Consensus 82 ~~~w~~-~~l~~~l~~~~---~~pv~v~NDa~aaal~E~~~ 118 (302)
T 3vov_A 82 IPGVQD-FPIRRILEEAT---GRPVFLENDANAAALAEHHL 118 (302)
T ss_dssp CTTCTT-CCHHHHHHHHH---SSCEEEEEHHHHHHHHHHHH
T ss_pred CCCcCC-CChHHHHHHhh---CCCEEEEechHHHHHHHHHh
Confidence 010 13456677764 79999988866665555543
No 10
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=92.37 E-value=0.37 Score=42.23 Aligned_cols=99 Identities=12% Similarity=0.013 Sum_probs=62.9
Q ss_pred ceEEEEecCCCeEEEEEecC--c-eeeeeeeeecc-chhHHHHHHHHHHHcCCCEEEEeecCCCC--------CCC--Ch
Q 026881 63 GFSLGVDLGLSRTGLALSKG--F-CVRPLTVLKLR-GEKLELQLLEIAQREETDEFIIGLPKSWD--------GSE--TP 128 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~-~A~Pl~~i~~~-~~~~~~~L~~li~e~~i~~IVVGLPl~~d--------Gt~--s~ 128 (231)
..++|||+|..+|=+|+.|. . +.+ ..++.. .......+.+.+++.++.+|-||.|=..| |.. ++
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~t~~~~~~l~~i~~~~~~~~i~gigi~~pG~vd~~~~~~~~G~i~~~~ 80 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDR--IEFPTXMPDETIEXVIQYFSQFSLQAIGIGSFGPVDNDXTSQTYGTITATP 80 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEE--EEEECCCHHHHHHHHHHHHTTSCCSEEEEEECSSEECCTTSTTTTEECCCS
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEE--EEecCCChHHHHHHHHHHhccCCceEEEEEeceeeccccccccccEEecCC
Confidence 47899999999999999983 2 221 222222 23455677777777889999999974332 211 11
Q ss_pred --hHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 129 --QSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 129 --~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
.... ..+.+.|++++ ++||++.+.--....|+..+
T Consensus 81 ~~~w~~-~~l~~~l~~~~---~~pV~v~NDanaaalaE~~~ 117 (302)
T 3epq_A 81 XAGWRH-YPFLQTVXNEM---XIPVGFSTDVNAAALGEFLF 117 (302)
T ss_dssp STTTBT-CCHHHHHHHHH---CSCEEEEEHHHHHHHHHHHH
T ss_pred CCCccC-CChHHHHHHHh---CCCEEEechhHHHHHHHHHh
Confidence 0011 23456777765 79999988866665565544
No 11
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=92.25 E-value=0.16 Score=44.50 Aligned_cols=102 Identities=14% Similarity=0.186 Sum_probs=58.1
Q ss_pred ceEEEEecCCCeEEEEEecC---ceeeeeeeeeccchhHHHHHH----HHHHHcCCCEEEEeecCCCCCCCChhH--H--
Q 026881 63 GFSLGVDLGLSRTGLALSKG---FCVRPLTVLKLRGEKLELQLL----EIAQREETDEFIIGLPKSWDGSETPQS--N-- 131 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~---~~A~Pl~~i~~~~~~~~~~L~----~li~e~~i~~IVVGLPl~~dGt~s~~~--~-- 131 (231)
+.+||||.|..+|=+++.|. ++.+-....+...+...+.|. ++.++.++.+|.||.|=..|...+... .
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l 81 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFAPNI 81 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEESSEECTTSSCEEECSSS
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHHHHHhhcCceEEEEeccccEeCCCCEEEeCCCC
Confidence 47999999999999999993 222111111112233344444 444455789999999843332111000 0
Q ss_pred --HHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 132 --KVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 132 --~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
.-..+.+.|++++ ++||++.+.--....|+..+
T Consensus 82 ~w~~~~l~~~l~~~~---~~pv~v~NDa~aaal~E~~~ 116 (321)
T 3vgl_A 82 DWRHEPLKDKVEQRV---GLPVVVENDANAAAWGEYRF 116 (321)
T ss_dssp CCEEECHHHHHHHHH---CSCEEEEEHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHhhhh---CCCEEEEehhhhHHHHHHHh
Confidence 0012455677664 79999998866655555443
No 12
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=89.27 E-value=4.3 Score=36.58 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=53.1
Q ss_pred ceEEEEecCCCeEEEEEecCceeeeeeeeeccc----------hhH---HHHHHHHHHHc-----CCCEEEEeecCCC--
Q 026881 63 GFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRG----------EKL---ELQLLEIAQRE-----ETDEFIIGLPKSW-- 122 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~~A~Pl~~i~~~~----------~~~---~~~L~~li~e~-----~i~~IVVGLPl~~-- 122 (231)
..+||||+|..+|=+|+.|.........++... ... ...+.+++.+. ++.+| ||.|=..
T Consensus 2 ~~vlgidiGgt~ik~al~d~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i~~pG~vd~ 80 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDERMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF-VSRGGLLDP 80 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETTEEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE-EEECCSCSC
T ss_pred CeEEEEECCccceeEEEEecchheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE-EecCCCCCC
Confidence 368999999999999999832111111222110 112 34566666544 58889 9988432
Q ss_pred -CCCC-----------------ChhHHHHHHHHHHHHHHhccCCCcEEEecCCC
Q 026881 123 -DGSE-----------------TPQSNKVRSVAGRLAVRAAERGWRVYLLDEHR 158 (231)
Q Consensus 123 -dGt~-----------------s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~ 158 (231)
.|.. ......--.+++.|++++ ++||++.|.-.
T Consensus 81 ~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~---~~Pv~v~NDan 131 (381)
T 1saz_A 81 IPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSET---GVPAYVVDPVV 131 (381)
T ss_dssp BCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHH---CCCEEEESCTT
T ss_pred CCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhc---CCCEEEeCCCc
Confidence 3443 111111124456677664 89999888766
No 13
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=88.31 E-value=3.1 Score=36.07 Aligned_cols=94 Identities=13% Similarity=0.043 Sum_probs=53.6
Q ss_pred eEEEEecCCCeEEEEEec--Cc-eeeeee-eee---ccchhHHHHHH----HHHHHc------CCCEEEEeecCCCCCCC
Q 026881 64 FSLGVDLGLSRTGLALSK--GF-CVRPLT-VLK---LRGEKLELQLL----EIAQRE------ETDEFIIGLPKSWDGSE 126 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD--~~-~A~Pl~-~i~---~~~~~~~~~L~----~li~e~------~i~~IVVGLPl~~dGt~ 126 (231)
.+||||.|..+|=+++.| +. .++-.. ... ...+..+..|. +++++. ++.+|.||.|=..+..
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~- 85 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQED- 85 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHH-
T ss_pred EEEEEEcCccceEEEEEeCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchH-
Confidence 799999999999999998 32 222111 111 01122334444 444332 5788999987443221
Q ss_pred ChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHH
Q 026881 127 TPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163 (231)
Q Consensus 127 s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA 163 (231)
.-..+.+.|+++++..++||++.+.-.....|
T Consensus 86 -----~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 86 -----AGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp -----HHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred -----HHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 12356667777642112899998876555544
No 14
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=88.21 E-value=3.7 Score=35.82 Aligned_cols=82 Identities=13% Similarity=0.081 Sum_probs=49.2
Q ss_pred ceEEEEecCCCeEEEEEecCceeeeeeeee--ccc-hhHHHHHHHHHHHcC-----CCEEEEeecCCCCCCCChhHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKGFCVRPLTVLK--LRG-EKLELQLLEIAQREE-----TDEFIIGLPKSWDGSETPQSNKVR 134 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~~A~Pl~~i~--~~~-~~~~~~L~~li~e~~-----i~~IVVGLPl~~dGt~s~~~~~v~ 134 (231)
.++|+||.|..+|=+|+-|+........+. .++ ++....|..+++.++ +++++|+-|.. ... .
T Consensus 2 ~MlL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~~~~~I~~iiISSVvp------~~~---~ 72 (266)
T 3djc_A 2 SLILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVVP------QVD---Y 72 (266)
T ss_dssp -CEEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEESCH------HHH---H
T ss_pred ceEEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCCChhhceEEEEecchH------hHH---H
Confidence 379999999999999999853211111121 122 234456778887664 88999995532 122 2
Q ss_pred HHHHHHHHHhccCCCcEEEecC
Q 026881 135 SVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 135 ~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
.+.+.+++. +++++++++.
T Consensus 73 ~l~~~~~~~---~~~~~~~v~~ 91 (266)
T 3djc_A 73 SLRSACVKY---FSIDPFLLQA 91 (266)
T ss_dssp HHHHHHHHH---TCCCCEECCS
T ss_pred HHHHHHHHH---cCCCeEEEcC
Confidence 333334443 3677777773
No 15
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=87.24 E-value=0.92 Score=39.08 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=57.0
Q ss_pred ceEEEEecCCCeEEEEEec--Cc-eeeeeeeeec----cchhHHH----HHHHHHHHc-----CCCEEEEeecCCC---C
Q 026881 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL----RGEKLEL----QLLEIAQRE-----ETDEFIIGLPKSW---D 123 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~----~~~~~~~----~L~~li~e~-----~i~~IVVGLPl~~---d 123 (231)
+.+||||.|..+|=+++.| +. +++ ..++. ..+..+. .+.+++++. ++.+|.||.|=.. +
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~--~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~pG~vd~~~ 83 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQK--WSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEK 83 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEE--EEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETTT
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEE--EEEcCCCCCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEecccceeCCC
Confidence 4799999999999999998 22 221 11111 1122333 444555543 4668889988532 2
Q ss_pred CCC--ChhHH-HHH-HHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 124 GSE--TPQSN-KVR-SVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 124 Gt~--s~~~~-~v~-~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
|.. ++... .-. .+.+.|++++ ++||++.+.-.....|+..+
T Consensus 84 g~v~~~~~l~w~~~~~l~~~l~~~~---~~pv~v~ND~~aaa~~e~~~ 128 (326)
T 2qm1_A 84 GTVVGAYNLNWTTVQPVKEQIESAL---GIPFALDNDANVAALGERWK 128 (326)
T ss_dssp TEEECBGGGTBCSCBCHHHHHHHHH---CSCEEEEEHHHHHHHHHHHH
T ss_pred CEEEecCCCCccCCchHHHHHHHHh---CCCEEEecHHHHHHHHHHHh
Confidence 321 11000 001 3456677764 78999988766665555443
No 16
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=86.71 E-value=1.8 Score=37.05 Aligned_cols=90 Identities=16% Similarity=0.084 Sum_probs=53.8
Q ss_pred eEEEEecCCCeEEEEEec--Cc-eeeeeeeeecc-----c-hhHHHHHHHHHHHc---CCCEEEEeecCCCCCCCChhHH
Q 026881 64 FSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR-----G-EKLELQLLEIAQRE---ETDEFIIGLPKSWDGSETPQSN 131 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~~-----~-~~~~~~L~~li~e~---~i~~IVVGLPl~~dGt~s~~~~ 131 (231)
.+||||.|..+|=+++.| +. +.+ ..++.. + +..++.+.+.+++. .+..|.||.|=. +...
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~--~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~igi~~~G~-~~~~----- 74 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGE--GSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGMGVAGL-DSKF----- 74 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEE--EEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEEEETTC-CSHH-----
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEE--EeCCCCCcccCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCCC-Cchh-----
Confidence 689999999999999998 22 221 112111 1 23445555555432 278999998754 3211
Q ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 132 KVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 132 ~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
.+..+.+.|++ + ++||++++.-.....|+.
T Consensus 75 ~~~~l~~~l~~-~---~~pv~v~ND~~aaa~~e~ 104 (299)
T 2e2o_A 75 DWENFTPLASL-I---APKVIIQHDGVIALFAET 104 (299)
T ss_dssp HHHHHHHHHTT-S---SSEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHh-C---CCCEEEeCcHHHHHhhcc
Confidence 11345555654 3 689999887665555543
No 17
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=85.86 E-value=1.8 Score=38.73 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=58.0
Q ss_pred CceEEEEecCCCeEEEEEec--Cc-eeeeeeeeecc-c-hhHHHH----HHHHHHH-----cCCCEEEEeecCCCC---C
Q 026881 62 GGFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR-G-EKLELQ----LLEIAQR-----EETDEFIIGLPKSWD---G 124 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~~-~-~~~~~~----L~~li~e-----~~i~~IVVGLPl~~d---G 124 (231)
.+.++|||+|..+|=+++.| +. +++-....... + +..++. +.+++++ .++.+|.||.|=..+ |
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g 165 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERG 165 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTT
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEEEEEEEccCCCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCC
Confidence 46799999999999999998 32 22211111111 1 223333 4444433 368899999985433 3
Q ss_pred CCC--hh--HHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 125 SET--PQ--SNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 125 t~s--~~--~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
... +. ... ..+.+.|++++ ++||++.+.-.....|+..+
T Consensus 166 ~v~~~~~l~w~~-~~l~~~l~~~~---~~pV~v~NDanaaalaE~~~ 208 (380)
T 2hoe_A 166 IIIDPRNFPLSQ-IPLANLLKEKY---GIEVWVENDADMGAVGEKWY 208 (380)
T ss_dssp EECCCSSCTTBT-SCHHHHHHHHH---CSEEEEEEHHHHHHHHHHHH
T ss_pred EEeccCCCCCcC-CChHHHHHHHh---CCCEEEechHHHHHHHHHHh
Confidence 211 00 000 13456677664 79999988866655555443
No 18
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=85.36 E-value=2.3 Score=36.75 Aligned_cols=101 Identities=9% Similarity=0.082 Sum_probs=60.0
Q ss_pred ceEEEEecCCCeEEEEEecC---ceeeeeeeeec-cchhHHHHHHHHHHH-cCCCEEEEeecCCCC---CCC--Chh---
Q 026881 63 GFSLGVDLGLSRTGLALSKG---FCVRPLTVLKL-RGEKLELQLLEIAQR-EETDEFIIGLPKSWD---GSE--TPQ--- 129 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~---~~A~Pl~~i~~-~~~~~~~~L~~li~e-~~i~~IVVGLPl~~d---Gt~--s~~--- 129 (231)
+.++|||.|..+|=+++.|. ++.+-...... ..+.....+.+.+++ .++.+|.||.|=..| |.. ++.
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~ 83 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRR 83 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECSTTCHHHHHHHHHHHHHTCTTCCEEEEEESSEECTTTCEEEECTTCGG
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEEEEEecCCCCCHHHHHHHHHHHHhhcCCeeEEEEecCcceeCCCCEEEeCCCCCC
Confidence 46999999999999999982 22221111111 113345566666654 468999999984333 321 110
Q ss_pred HHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 130 SNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 130 ~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
... ..+.+.|++++ ++||++.+.--....|+..+
T Consensus 84 w~~-~~l~~~l~~~~---~~pV~v~NDa~aaal~E~~~ 117 (297)
T 4htl_A 84 FDN-FNLKEWLEAET---GLPVAIENDANCALLAEKWL 117 (297)
T ss_dssp GTT-EEHHHHHHHHH---CSCEEEEEHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHH---CcCEEEecHHHHHHHHHHHh
Confidence 111 13456677764 79999988766555555443
No 19
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=85.22 E-value=1.6 Score=38.13 Aligned_cols=101 Identities=14% Similarity=0.061 Sum_probs=58.2
Q ss_pred CceEEEEecCCCeEEEEEecC--c-eeeeeeeeecc----chhHHHHHHHHHH-----HcCCCEEEEeecCCCC---CCC
Q 026881 62 GGFSLGVDLGLSRTGLALSKG--F-CVRPLTVLKLR----GEKLELQLLEIAQ-----REETDEFIIGLPKSWD---GSE 126 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~--~-~A~Pl~~i~~~----~~~~~~~L~~li~-----e~~i~~IVVGLPl~~d---Gt~ 126 (231)
.+.+||||+|..+|=+++.|. . +.+ ..++.. .+...+.+.+.++ ..++.+|.||.|=..| |..
T Consensus 18 ~~~~lgidiggt~i~~~l~d~~g~il~~--~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~v 95 (321)
T 3r8e_A 18 QGMILGIDVGGTSVKFGLVTPEGEIQNA--TRFMTADWVNGIGFVESMKLEIGNFLKQYPIVKGVGIGWPGLVSLDRTKV 95 (321)
T ss_dssp -CCEEEEECCSSEEEEEEECTTCCEEEE--EEEEHHHHHTTTCHHHHHHHHHHHHHHHCTTCCEEEEEESSEECTTSCCE
T ss_pred CcEEEEEEECCCEEEEEEEcCCCcEEEE--EEEeCCCCCCHHHHHHHHHHHHHHHHhccCCeeEEEEEecccEECCCCEE
Confidence 468999999999999999983 2 222 122211 1223344444333 3579999999984322 321
Q ss_pred C--hh---HHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 127 T--PQ---SNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 127 s--~~---~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
. +. ... ..+.+.|+++++ ++||++.+.--....|+..+
T Consensus 96 ~~~~~l~~w~~-~~l~~~l~~~~~--~~pV~v~NDa~aaalaE~~~ 138 (321)
T 3r8e_A 96 ILLPNIPSVVN-VPIVEILRSEFP--HIHFKIENDAKCAALGEYYF 138 (321)
T ss_dssp EEBTTBCCCCS-CCHHHHHHHHCT--TSEEEEEEHHHHHHHHHHHH
T ss_pred EeCCCCccccC-CCHHHHHHHHcC--CCCEEEEchHHHHHHHHHHh
Confidence 1 00 000 234556776632 79999998865555555443
No 20
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=84.97 E-value=9.7 Score=32.17 Aligned_cols=85 Identities=19% Similarity=0.110 Sum_probs=54.3
Q ss_pred eEEEEecCCCeEEEEEec-Cc-eeeeeeeeeccchhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHHHH
Q 026881 64 FSLGVDLGLSRTGLALSK-GF-CVRPLTVLKLRGEKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSV 136 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD-~~-~A~Pl~~i~~~~~~~~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~~F 136 (231)
.+||||-=+..+++|+.+ +. .......-....+.+...+.+++++. .++.|+||.= -|+.+. .+-.-.+
T Consensus 2 ~iL~idTs~~~~sval~~~~~~~~~~~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~G---PGsftg-lRig~~~ 77 (231)
T 2gel_A 2 RILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQEILAASGASLNEIDALAFGRG---PGSFTG-VRIGIGI 77 (231)
T ss_dssp EEEEEECSSSEEEEEEEETTEEEEEEEECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECC---SSCHHH-HHHHHHH
T ss_pred eEEEEECCCcCeEEEEEECCEEEEEEhhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC---CChhHh-HHHHHHH
Confidence 699999999999999997 32 22211111112234566777777765 4799999821 134432 3434578
Q ss_pred HHHHHHHhccCCCcEEEec
Q 026881 137 AGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 137 a~~L~~~~~~~~lpV~lvD 155 (231)
++.|... .++|++-|+
T Consensus 78 ak~la~~---~~~Pl~~V~ 93 (231)
T 2gel_A 78 AQGLALG---ANLPMIGVS 93 (231)
T ss_dssp HHHHHHT---TTCCEEEEC
T ss_pred HHHHHHH---cCCCEEEec
Confidence 8888754 489998775
No 21
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=84.39 E-value=2.1 Score=36.47 Aligned_cols=95 Identities=15% Similarity=0.035 Sum_probs=58.6
Q ss_pred eEEEEecCCCeEEEEEec--Cc-eeeeeeeeec--cchhHHHHHHHHHHHcCCCEEEEeecCCCC---CCC--Chh---H
Q 026881 64 FSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL--RGEKLELQLLEIAQREETDEFIIGLPKSWD---GSE--TPQ---S 130 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~--~~~~~~~~L~~li~e~~i~~IVVGLPl~~d---Gt~--s~~---~ 130 (231)
.++|||.|..+|=+++.| +. +.+ ..++. ..+...+.|.+++++.++.+|.||.|=..| |.. ++. .
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~--~~~~~~~~~~~~~~~i~~~i~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~~ 82 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDK--TSISTPENLEDLLAWLDQRLSEQDYSGIAMSVPGAVNQETGVIDGFSAVPYI 82 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEE--EEECCCSSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCBEESCCSSGGG
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEE--EEEeCCCCHHHHHHHHHHHHHhCCCcEEEEEecCcccCCCCEEEecCCCCcc
Confidence 589999999999999998 32 221 11111 123455677787777789999999994322 321 110 1
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 131 NKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 131 ~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
.. ..+.+.| ++ +++||++.+.-.....|+.
T Consensus 83 ~~-~~l~~~l-~~---~~~pv~v~NDa~aaa~~e~ 112 (292)
T 2gup_A 83 HG-FSWYEAL-SS---YQLPVHLENDANCVGLSEL 112 (292)
T ss_dssp SS-SBHHHHT-GG---GCCCEEEEEHHHHHHHHHH
T ss_pred cC-CCHHHHH-HH---cCCCEEEechHHHHHHHHH
Confidence 11 1345566 55 4789998887655554543
No 22
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=83.87 E-value=4.1 Score=35.26 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=56.4
Q ss_pred ceEEEEecCCCeEEEEEec--Cc-eeeeeeeeec--c-chhHHHHHHHHHHH----c-CCCEEEEeecCCCC---CCCC-
Q 026881 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL--R-GEKLELQLLEIAQR----E-ETDEFIIGLPKSWD---GSET- 127 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~--~-~~~~~~~L~~li~e----~-~i~~IVVGLPl~~d---Gt~s- 127 (231)
+.+||||.|..+|=+++.| +. +.+ ..+.. . .+...+.|.+++++ . .+..|.||.|=..| |...
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~~igi~~pG~vd~~~g~v~~ 101 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWE--KRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTLYA 101 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEE--EEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCCBC
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEE--EEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeeeeEECCCCEEEc
Confidence 4699999999999999998 32 221 11111 1 12344455555542 2 47889999995333 3221
Q ss_pred ---hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 128 ---PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 128 ---~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
+.... ..+.+.|++++ ++||++.+.-.....|+.
T Consensus 102 ~~~~~~~~-~~l~~~l~~~~---~~pv~v~NDa~aaalgE~ 138 (327)
T 2ap1_A 102 ANVPAASG-KPLRADLSARL---DRDVRLDNDANCFALSEA 138 (327)
T ss_dssp TTCTTTTT-SCHHHHHHHHH---TSCEEEEEHHHHHHHHHH
T ss_pred cCCCccCC-CChHHHHHHHH---CCCEEEecHHHHHHHHHH
Confidence 11111 13455677664 789998888666555543
No 23
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=83.60 E-value=10 Score=32.04 Aligned_cols=91 Identities=18% Similarity=0.116 Sum_probs=59.5
Q ss_pred ceEEEEecCCCeEEEEEecC-ceeeeeeeeec-cchhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKG-FCVRPLTVLKL-RGEKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRS 135 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~-~~A~Pl~~i~~-~~~~~~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~~ 135 (231)
+++||||--+..+++|+.+. .+..-.....+ ..+.+...+.+++++. .++.|+|+.= -|+.+ --+-.-.
T Consensus 2 M~iLaIdTS~~~~svAl~~~~~~~~~~~~~~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~G---PGsfT-glRig~~ 77 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRG---PGSFT-GVRIGIG 77 (213)
T ss_dssp CCEEEEECSSSEEEEEEESSSCEEEEEEECCSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEE---SSCHH-HHHHHHH
T ss_pred CEEEEEEccCcceEEEEEECCEEEEEEEechHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecC---CCchh-hHHHHHH
Confidence 47999999999999999983 22212222222 2244556777777754 6899999831 24543 2344567
Q ss_pred HHHHHHHHhccCCCcEEEecCCCcHHHHH
Q 026881 136 VAGRLAVRAAERGWRVYLLDEHRTSAEAV 164 (231)
Q Consensus 136 Fa~~L~~~~~~~~lpV~lvDER~TT~eA~ 164 (231)
+++.|... .++|++-+ ||.+|.
T Consensus 78 ~AkgLa~~---~~iPl~gV----stL~a~ 99 (213)
T 3r6m_A 78 IAQGLAFG---AELPMIGV----STLAAM 99 (213)
T ss_dssp HHHHHHHH---TTCCEEEE----EHHHHH
T ss_pred HHHHHHHH---hCCCEEEE----cCHHHH
Confidence 88888865 38999877 456554
No 24
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=82.05 E-value=2.5 Score=36.95 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=53.4
Q ss_pred ceEEEEecCCCeEEEEEecC--c-eeeeeeeeecc---chhHHHHHHHH----HHHc--CCCEEEEeecCCCC---CCC-
Q 026881 63 GFSLGVDLGLSRTGLALSKG--F-CVRPLTVLKLR---GEKLELQLLEI----AQRE--ETDEFIIGLPKSWD---GSE- 126 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~-~A~Pl~~i~~~---~~~~~~~L~~l----i~e~--~i~~IVVGLPl~~d---Gt~- 126 (231)
+.++|||+|..+|=+++.|. . ..+ ..++.. .....+.+.++ +.++ ++.+|-||.|=..| |..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~~~g~v~ 84 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHC--EKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTII 84 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEE--EEEEHHHHHTTCHHHHHHHHHHHHHHHHTEEEEEEEEEESSCBCTTSSCBC
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEE--EEecCccccHHHHHHHHHHHHHHHHHhcCCCeeEEEEeccccEeCCCCEEE
Confidence 58999999999999999983 2 221 112111 12233344444 3333 45789999984333 321
Q ss_pred -Ch---hHH-HHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 127 -TP---QSN-KVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 127 -s~---~~~-~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
++ +.. ....+.+.|++++ ++||++.+.-..
T Consensus 85 ~~~~l~~~~~~~~~l~~~l~~~~---~~pv~v~NDana 119 (310)
T 3htv_A 85 STPNLPLTAADLYDLADKLENTL---NCPVEFSRDVNL 119 (310)
T ss_dssp SCCSSSCCHHHHTTHHHHHHHHH---TSCEEEEEHHHH
T ss_pred eCCCCCCccccCccHHHHHHHHh---CCCEEEeeHHHH
Confidence 11 111 1124667788775 799998877543
No 25
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=81.74 E-value=1.9 Score=38.72 Aligned_cols=101 Identities=20% Similarity=0.141 Sum_probs=57.3
Q ss_pred CceEEEEecCCCeEEEEEec--Cc-eeeeeeeeec-cchhHHH----HHHHHHHH-----cCCCEEEEeecCCCC---CC
Q 026881 62 GGFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL-RGEKLEL----QLLEIAQR-----EETDEFIIGLPKSWD---GS 125 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~-~~~~~~~----~L~~li~e-----~~i~~IVVGLPl~~d---Gt 125 (231)
.+.++|||+|..+|=+++.| +. .++-...... ..+..+. .+.+++++ .++.+|.||.|=..| |.
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 163 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGI 163 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTE
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCE
Confidence 46899999999999999998 32 2211111111 1122333 34444444 246788899885322 21
Q ss_pred CC------hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 126 ET------PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 126 ~s------~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
.. .+. . ..+.+.|++++ ++||++.+.--....|+..+
T Consensus 164 v~~~~~l~~w~-~-~~l~~~l~~~~---~~pv~v~NDa~aaalaE~~~ 206 (406)
T 1z6r_A 164 VHRMPFYEDVK-E-MPLGEALEQHT---GVPVYIQHDISAWTMAEALF 206 (406)
T ss_dssp EEECTTCTTCS-S-BCHHHHHHHHH---SSCEEEEEHHHHHHHHHHHH
T ss_pred EecCCCCCCcc-C-CCHHHHHHHHH---CCCEEEechhHHHHHHHHHh
Confidence 10 111 0 13455677664 79999988766655555443
No 26
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=80.51 E-value=5 Score=36.37 Aligned_cols=101 Identities=18% Similarity=0.128 Sum_probs=60.3
Q ss_pred CceEEEEecCCCeEEEEEecC-c-eeeeeeeeecc--c-hhHHHHHHH---HHHHc---CCCEEEEeecCCCC---CCC-
Q 026881 62 GGFSLGVDLGLSRTGLALSKG-F-CVRPLTVLKLR--G-EKLELQLLE---IAQRE---ETDEFIIGLPKSWD---GSE- 126 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~-~-~A~Pl~~i~~~--~-~~~~~~L~~---li~e~---~i~~IVVGLPl~~d---Gt~- 126 (231)
.+.++|+|+|..++-+++.|. . +.+. ..++.. + +...+.|.+ .+++. ++.+|.||.|=..| |..
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~G~il~~~-~~~~~~~~~~~~~l~~i~~~~~~i~~~~~~~i~gIGIavPG~Vd~~~G~i~ 86 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQGGKEIADP-VVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIG 86 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEETTEECSCC-EEEECCTTCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEEC
T ss_pred CCEEEEEEECcceEEEEEEECCEEEEEE-EEEECCCCCHHHHHHHHHHHHHHHHHHhhcCCeEEEEEecceEeCCCCEEE
Confidence 468999999999999999982 1 2221 022222 1 234556666 66553 79999999984332 322
Q ss_pred -ChhHHHH---HHHHHHHHHHhccCCCcEEEecCCCcHHHHHHH
Q 026881 127 -TPQSNKV---RSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDR 166 (231)
Q Consensus 127 -s~~~~~v---~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~ 166 (231)
++..... -.+.+.|++++ ++||++.+.--...-|+..
T Consensus 87 ~~~nlp~w~~~~~l~~~L~~~~---g~PV~veNDanaaAlgE~~ 127 (366)
T 3mcp_A 87 DLPNFPSFRGGVALGPFLEDIF---GIPVFINNDGSLFAYGEAL 127 (366)
T ss_dssp CCTTCGGGTTCBCHHHHHHHHH---CSCEEEECHHHHHHHHHHH
T ss_pred eCCCcccccCCCCHHHHHHHHH---CCCEEEechhhHHHHHHHH
Confidence 1111011 13456677764 8999988875554445443
No 27
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=80.21 E-value=12 Score=31.66 Aligned_cols=92 Identities=16% Similarity=0.009 Sum_probs=58.6
Q ss_pred ceEEEEecCCCeEEEEEecCc-eeeeeeeeec-cchhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKGF-CVRPLTVLKL-RGEKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRS 135 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~-~A~Pl~~i~~-~~~~~~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~~ 135 (231)
-+|||||==+..|++|+.+.. +..-.....+ ..+.+...+.+++++. +++.|+||. --|+.+. .+-.-.
T Consensus 12 ~~iLaidTS~~~~sval~~~~~~l~~~~~~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~---GPGsfTG-lRiG~~ 87 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKGEDLFEISYTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGI---GPGGLTG-LRVGIA 87 (218)
T ss_dssp -CEEEEEECSSSEEEEEEETTEEEEEEEESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEEC---CSSCHHH-HHHHHH
T ss_pred ceEEEEEcCCcCeEEEEEECCEEEEEEecchHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc---CCCchHh-HHHHHH
Confidence 479999999999999999742 2211111111 2244556777777653 579999992 1245544 355567
Q ss_pred HHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 136 VAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 136 Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
+|+.|+..+ ++|++-+ ||.+|..
T Consensus 88 ~Ak~La~~~---~iPl~gV----s~l~a~a 110 (218)
T 2a6a_A 88 TVVGLVSPY---DIPVAPL----NSFEMTA 110 (218)
T ss_dssp HHHHHHGGG---TCCEEEE----CHHHHHH
T ss_pred HHHHHHHHc---CCCEEEe----CcHHHHH
Confidence 888888653 8898865 4566643
No 28
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=80.16 E-value=4 Score=34.51 Aligned_cols=96 Identities=16% Similarity=0.057 Sum_probs=57.5
Q ss_pred eEEEEecCCCeEEEEEec--Cc-eeeeeeeeecc----chhHHHHHHHHHHHc--CCCEEEEeecCCCC---CCC--Chh
Q 026881 64 FSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR----GEKLELQLLEIAQRE--ETDEFIIGLPKSWD---GSE--TPQ 129 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~~----~~~~~~~L~~li~e~--~i~~IVVGLPl~~d---Gt~--s~~ 129 (231)
.++|||.|..+|=+++.| +. +.+ ..++.. .+...+.|.+++++. ++..|.||.|=..| |.. ++.
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~--~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~igi~~pG~vd~~~g~v~~~~~ 79 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDR--RELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHN 79 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEE--EEEECCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECSSGGG
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEE--EEecCCCCCCHHHHHHHHHHHHHHHHhhCCEEEEEeccceeCCCCEEEeCCC
Confidence 589999999999999998 32 222 122111 133556677777653 46789999984322 211 111
Q ss_pred ---HHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 130 ---SNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 130 ---~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
... ..+.+.|++++ ++||++.+.-.....|+.
T Consensus 80 ~~~w~~-~~l~~~l~~~~---~~pv~v~NDa~aaa~~e~ 114 (289)
T 2aa4_A 80 LGGLLH-FPLVKTLEQLT---NLPTIAINDAQAAAWAEF 114 (289)
T ss_dssp GGGGTT-CCHHHHHHHHH---CSCEEEEEHHHHHHHHHH
T ss_pred CCcccC-CChHHHHHHHH---CCCEEEechHHHHHHHHH
Confidence 111 13456677765 789999887665555543
No 29
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=79.33 E-value=18 Score=31.81 Aligned_cols=87 Identities=14% Similarity=0.163 Sum_probs=51.4
Q ss_pred eEEEEecCCCeEEEEEec-C-ceeeeeeeeeccc-------------hhHHHHHHHHHHH-----cCCCEEEEeecCCCC
Q 026881 64 FSLGVDLGLSRTGLALSK-G-FCVRPLTVLKLRG-------------EKLELQLLEIAQR-----EETDEFIIGLPKSWD 123 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD-~-~~A~Pl~~i~~~~-------------~~~~~~L~~li~e-----~~i~~IVVGLPl~~d 123 (231)
.+||||-+...+++|+.+ + +.+.-...+.+.. +.+...+.+++++ ..++.|+++.= -
T Consensus 2 ~iLgIdts~~~~~val~~~g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~G---P 78 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSEDKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQG---P 78 (330)
T ss_dssp CEEEEECSSSEEEEEEECSSCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEE---S
T ss_pred EEEEEEccCCCeEEEEEECCEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECC---C
Confidence 599999999999999997 3 3332222111100 1222356666655 36889998510 2
Q ss_pred CCCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 124 GSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 124 Gt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
|..+.. +....|++.|... .++|++.+++-
T Consensus 79 G~~~~l-rvg~~~ak~la~~---~~~pl~~v~h~ 108 (330)
T 2ivn_A 79 GLGPAL-RVVATAARALAVK---YRKPIVGVNHC 108 (330)
T ss_dssp SCHHHH-HHHHHHHHHHHHH---TTCCEEEEEHH
T ss_pred CchHHH-HHHHHHHHHHHHH---cCCCEEeeCcH
Confidence 333221 3334678877765 47899988873
No 30
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=77.62 E-value=11 Score=32.90 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=55.4
Q ss_pred eEEEEecCCCeEEEEEecC--c-eeeeeeeeecc--c-hhHHHHHHHHHH----Hc-CCCEEEEeecCCC---CCCCC--
Q 026881 64 FSLGVDLGLSRTGLALSKG--F-CVRPLTVLKLR--G-EKLELQLLEIAQ----RE-ETDEFIIGLPKSW---DGSET-- 127 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~--~-~A~Pl~~i~~~--~-~~~~~~L~~li~----e~-~i~~IVVGLPl~~---dGt~s-- 127 (231)
.++|||.|..+|=+++.|. . +.+ ..++.. + +...+.|.++++ +. .+.+|.||.|=.. +|...
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~gigi~~pG~vd~~~g~v~~~ 102 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVAT--ERVPTPTDDYPLLLETIAGLVAKYDQEFACEGKIGLGLPGMEDADDATVLTV 102 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEE--EEEECCTTCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESEEECTTTCCEEES
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEE--EEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeeccEeCCCCEEEcC
Confidence 6899999999999999993 2 222 222221 1 233444444443 32 4689999998432 23211
Q ss_pred --hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 128 --PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 128 --~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
+.... ..+.+.|++++ ++||++.+.-.....|+.
T Consensus 103 ~~~~~~~-~~l~~~l~~~~---~~pV~v~NDa~aaalgE~ 138 (327)
T 4db3_A 103 NVPAAKG-KPLRADLEAKI---GRSVKIENDANCFALSEA 138 (327)
T ss_dssp SSGGGTT-SCHHHHHHHHH---SSCCEEEEHHHHHHHHHH
T ss_pred CCccccC-CCHHHHHHHHH---CCCEEEecchhHHHHHHH
Confidence 01010 23456677764 789988887655555544
No 31
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=77.18 E-value=2.6 Score=38.34 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=56.8
Q ss_pred CceEEEEecCCCeEEEEEec--Cc-eeeeeeeeeccc-hhHHHH----HHHHHHHc-----CCCEEEEeecCCCC---CC
Q 026881 62 GGFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLRG-EKLELQ----LLEIAQRE-----ETDEFIIGLPKSWD---GS 125 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~~~-~~~~~~----L~~li~e~-----~i~~IVVGLPl~~d---Gt 125 (231)
.+.++|||+|..+|=+++.| +. +++-.......+ +..++. +.+++.+. ++.+|.||.|=..| |.
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 186 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGI 186 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTE
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCe
Confidence 46899999999999999998 32 222111111111 223333 44444443 35678888884322 31
Q ss_pred CC--hh--HHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 126 ET--PQ--SNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 126 ~s--~~--~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
.. +. ... ..+.+.|++++ ++||++.+.--....|+..+
T Consensus 187 v~~~~~l~w~~-~~l~~~L~~~~---~~pV~v~NDa~aaalaE~~~ 228 (429)
T 1z05_A 187 VLQMPHYNVKN-LALGPEIYKAT---GLPVFVANDTRAWALAEKLF 228 (429)
T ss_dssp EEECSSSBCSS-BCHHHHHHHHH---CSCEEEEEHHHHHHHHHHHH
T ss_pred EeecCCCCCCC-CCHHHHHHHHh---CCCEEEechhHHHHHHHHHh
Confidence 10 00 000 13456677764 79999988866655555443
No 32
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=76.93 E-value=6.6 Score=33.05 Aligned_cols=100 Identities=12% Similarity=0.096 Sum_probs=56.7
Q ss_pred ceEEEEecCCCeEEEEEec-C--ceeeeeeeeecc---c-hhHHHHHHHHHHHc--------CCCEEEEeecCCC-CCCC
Q 026881 63 GFSLGVDLGLSRTGLALSK-G--FCVRPLTVLKLR---G-EKLELQLLEIAQRE--------ETDEFIIGLPKSW-DGSE 126 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD-~--~~A~Pl~~i~~~---~-~~~~~~L~~li~e~--------~i~~IVVGLPl~~-dGt~ 126 (231)
+.++|||+|..+|=+++.| . ....-...++.. + +...+.+.+++++. .+.+|.||.|=.. +|..
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~igi~~pG~v~~g~v 91 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQHGVV 91 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSCEETTEE
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCCccCCHHHHHHHHHHHHHHHHHhccccCccceEEEEccceEcCCEE
Confidence 4689999999999999998 2 222111122211 1 23334455544432 3457999998432 3322
Q ss_pred C--h----hHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHH
Q 026881 127 T--P----QSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDR 166 (231)
Q Consensus 127 s--~----~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~ 166 (231)
. + .... ..+.+.|++++ ++||++.+.--....|+..
T Consensus 92 ~~~~~l~~~w~~-~~l~~~l~~~~---~~pV~v~NDanaaalaE~~ 133 (267)
T 1woq_A 92 HSAANVDKSWLN-TDIDALLTARL---GRPVEVINDADAAGLAEAR 133 (267)
T ss_dssp CCCTTSCGGGTT-CBHHHHHHHHH---TSCEEEEEHHHHHHHHHHH
T ss_pred EeCCCCCCCCCC-CCHHHHHHHHH---CCCEEEeehhHHHHHHHHH
Confidence 1 1 0111 23556677764 7999998886665555544
No 33
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=73.64 E-value=11 Score=32.85 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=55.6
Q ss_pred CceEEEEecCCCeEEEEEec-C--ceeeeeeeeeccc-hhHHHHHHHHHHHc--CCCEEEEeecCCCCCCC-----ChhH
Q 026881 62 GGFSLGVDLGLSRTGLALSK-G--FCVRPLTVLKLRG-EKLELQLLEIAQRE--ETDEFIIGLPKSWDGSE-----TPQS 130 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD-~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~--~i~~IVVGLPl~~dGt~-----s~~~ 130 (231)
++.++|+|+|..+|=+|+.| . .+.. ...++... ..+...+.+++++. .+.+|.||.|=-.|... -.+.
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~ 91 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQ-AKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWA 91 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEE-EEEEEGGGCSCHHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCC
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEE-EEEecCCCcCCHHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCc
Confidence 56899999999999999987 2 2221 12222211 23455677777654 58899999985433211 0111
Q ss_pred HHHHHHHHHHHHHhccCCCc-EEEecCCCcHHHHH
Q 026881 131 NKVRSVAGRLAVRAAERGWR-VYLLDEHRTSAEAV 164 (231)
Q Consensus 131 ~~v~~Fa~~L~~~~~~~~lp-V~lvDER~TT~eA~ 164 (231)
+. .+.|++++ ++| |++.+.--.-.-|+
T Consensus 92 --~~--~~~l~~~~---~~p~V~v~NDanaaalgE 119 (332)
T 1sz2_A 92 --FS--IAEMKKNL---GFSHLEIINDFTAVSMAI 119 (332)
T ss_dssp --EE--HHHHHHHH---TCSEEEEEEHHHHHHHHG
T ss_pred --CC--HHHHHHHh---CCCcEEEEeCHhHHhccc
Confidence 11 24566654 787 88887754444333
No 34
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=73.37 E-value=6.4 Score=33.36 Aligned_cols=58 Identities=21% Similarity=0.205 Sum_probs=37.1
Q ss_pred ceEEEEecCCCeEEEEEecCceeeeeeeeeccc-hhHHHHHHHHHHHcCCCEEEEeecC
Q 026881 63 GFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPK 120 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~~A~Pl~~i~~~~-~~~~~~L~~li~e~~i~~IVVGLPl 120 (231)
+.++|+|+|..+|=++..++....-..+-...+ +...+.+.++++++++.+|-||.|=
T Consensus 6 ~~~lgiDIGGT~i~~~d~~g~~~~~~~t~~~~~~~~~~~~i~~~i~~~~i~gigi~~pG 64 (226)
T 3lm2_A 6 QTVLAIDIGGSHVKIGLSTDGEERKVESGKTMTGPEMVAAVTAMAKDMTYDVIAMGYPG 64 (226)
T ss_dssp CCEEEEEECSSEEEEEETTTCCEEEEECCTTCCHHHHHHHHHHHTTTCCCSEEEEEESS
T ss_pred CEEEEEEECCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEEEEe
Confidence 479999999999886433332211111111111 3456778888888899999999983
No 35
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=72.64 E-value=33 Score=29.63 Aligned_cols=80 Identities=9% Similarity=0.108 Sum_probs=47.6
Q ss_pred eEEEEecCCCeEEEEEecCceeeeeeeeec---cc-hhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHH
Q 026881 64 FSLGVDLGLSRTGLALSKGFCVRPLTVLKL---RG-EKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVR 134 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~~~A~Pl~~i~~---~~-~~~~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~ 134 (231)
++|+||.|..+|=+|+-|+........+.. ++ .++...|..+++.+ .++.++|--+ .+ ....
T Consensus 1 MlL~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~ll~~~~~~~~~i~~iiISSV-------vp--~~~~ 71 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVSSV-------VP--PIMF 71 (268)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEEES-------CH--HHHH
T ss_pred CEEEEEECcCcEEEEEEECCEEEEEEEecCCCcCCHHHHHHHHHHHHHHcCCCcccCcEEEEEcc-------Ch--hHHH
Confidence 589999999999999998532111112211 12 23445677787765 4788988743 12 2223
Q ss_pred HHHHHHHHHhccCCCcEEEec
Q 026881 135 SVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 135 ~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.+.+.+++. +++++++++
T Consensus 72 ~l~~~~~~~---~~~~~~~v~ 89 (268)
T 2h3g_X 72 ALERMCEKY---FKIKPLVVG 89 (268)
T ss_dssp HHHHHHHHH---TCCCCEECS
T ss_pred HHHHHHHHH---hCCCeEEEc
Confidence 344445544 367777774
No 36
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=71.69 E-value=39 Score=29.92 Aligned_cols=87 Identities=9% Similarity=0.095 Sum_probs=52.3
Q ss_pred CceEEEEecCCCeEEEEEecC--ceeeeeeeeec-------------cchhHHHHHHHHHHH-----cCCCEEEEeecCC
Q 026881 62 GGFSLGVDLGLSRTGLALSKG--FCVRPLTVLKL-------------RGEKLELQLLEIAQR-----EETDEFIIGLPKS 121 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~-------------~~~~~~~~L~~li~e-----~~i~~IVVGLPl~ 121 (231)
.+.|||||=-..-+++|+.+. +++.-...+.+ ..+.+...+++++++ ..+|.|+|+.
T Consensus 5 ~M~iLgIdts~~~~svAl~~~~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~--- 81 (334)
T 3eno_A 5 PMIVLGLEGTAHTISCGIIDESRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSM--- 81 (334)
T ss_dssp CCEEEEEECSSSEEEEEEEESSCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC---
T ss_pred CceEEEEECCCcCeEEEEEECCEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc---
Confidence 468999999999999999973 33321121110 012233455566655 3689999982
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 122 ~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
--|..+. -+.-..+++.|...+ ++|++.++
T Consensus 82 gPG~~t~-lrvg~~~ak~La~~~---~~Pl~~v~ 111 (334)
T 3eno_A 82 GPGLAPS-LRVTATAARTISVLT---GKPIIGVN 111 (334)
T ss_dssp SSSCHHH-HHHHHHHHHHHHHHH---TCCCEEEC
T ss_pred CCCCcch-HHHHHHHHHHHhhcc---CCCeEEec
Confidence 1122222 233456777777553 78999885
No 37
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=69.90 E-value=10 Score=33.64 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=45.0
Q ss_pred ccchhhhcccccccccCCCCCCceEEEEecCCCeEEEEEecC----ce-eeeeee-eec-cchhHHHHHHHHHHHc----
Q 026881 41 LSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKG----FC-VRPLTV-LKL-RGEKLELQLLEIAQRE---- 109 (231)
Q Consensus 41 ~~~~~~~~~~~~r~~~~~~~~~g~iLglD~G~kRIGvAvsD~----~~-A~Pl~~-i~~-~~~~~~~~L~~li~e~---- 109 (231)
-|+.+++.-+.. ...|.++.+||+|.|..+|=+++.|. .. ...... ... ..+...+.|.+++++.
T Consensus 11 ~l~~~~~~~e~~----~~~~~~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~~~~~~~~~~~~~i~~~i~~~~~~~ 86 (373)
T 2q2r_A 11 ELSLHELCEELK----TPAWNAPLTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIELMPASV 86 (373)
T ss_dssp ECCHHHHHHHTT----SGGGCSCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEECTTCBGGGHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHhc----CcCCCCCeEEEEEEccccEEEEEEecccCCCccEEEEeeecCCCCHHHHHHHHHHHHHHHhhcc
Confidence 345555554432 11244678999999999999999874 21 100111 111 1234556666666542
Q ss_pred --CCCEEEEeecCC
Q 026881 110 --ETDEFIIGLPKS 121 (231)
Q Consensus 110 --~i~~IVVGLPl~ 121 (231)
.+.+|.||.|=.
T Consensus 87 ~~~i~gigi~~pG~ 100 (373)
T 2q2r_A 87 MKRVKAGVINVPGP 100 (373)
T ss_dssp HTTEEEEEEEESSC
T ss_pred cccccEEEEEeecc
Confidence 467899999843
No 38
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=68.29 E-value=8.9 Score=33.38 Aligned_cols=98 Identities=18% Similarity=0.060 Sum_probs=54.5
Q ss_pred ceEEEEecCCCeEEEEEec--Cc-eeeeeeeeecc-c-hhHHHHHH----HHHHH-----cCCCEEEEeecCCCC---CC
Q 026881 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR-G-EKLELQLL----EIAQR-----EETDEFIIGLPKSWD---GS 125 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~~-~A~Pl~~i~~~-~-~~~~~~L~----~li~e-----~~i~~IVVGLPl~~d---Gt 125 (231)
..+||||.|..+|=+++.| +. +.+ ..++.. + ...+..+. +++.+ .++.+|.||.|=..| |.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 107 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKK--YTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGI 107 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEE--EEEECCSSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETTTTE
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEE--EEEcCCCCHHHHHHHHHHHHHHHHHhcccccCceEEEEEecccCEeCCCCE
Confidence 4799999999999999998 32 221 111111 1 22233333 33332 247788999884322 31
Q ss_pred CC--h----hHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHH
Q 026881 126 ET--P----QSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDR 166 (231)
Q Consensus 126 ~s--~----~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~ 166 (231)
.. + .... ..+.+.|++++ ++||++.+.-.....|+..
T Consensus 108 v~~~~~~~~~w~~-~~l~~~l~~~~---~~pv~v~NDa~aaal~E~~ 150 (343)
T 2yhw_A 108 VLHSTKLIQEWNS-VDLRTPLSDTL---HLPVWVDNDGNCAALAERK 150 (343)
T ss_dssp EEECCTTSSSCSS-EECHHHHHHHH---CSCEEEEEHHHHHHHHHHH
T ss_pred EEeCCcCCCCCcC-CCHHHHHHHHH---CCCEEEechhHHHHHHHHH
Confidence 10 0 0000 12355677664 7899998876665555543
No 39
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=67.98 E-value=19 Score=31.08 Aligned_cols=61 Identities=13% Similarity=0.334 Sum_probs=43.5
Q ss_pred HHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEE---ecCC--CcHHHHHHHHHHcCCCc
Q 026881 105 IAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYL---LDEH--RTSAEAVDRMINMGLSK 174 (231)
Q Consensus 105 li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~l---vDER--~TT~eA~~~l~e~G~~r 174 (231)
.+++.++++||+| -++.||+... ..++++. ... .+++|+| +|+- ---.+|-+.|.+.|+.|
T Consensus 84 ~~~~~GadGvV~G-~Lt~dg~iD~--~~~~~Li----~~a--~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~r 149 (224)
T 2bdq_A 84 RAVELESDALVLG-ILTSNNHIDT--EAIEQLL----PAT--QGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTR 149 (224)
T ss_dssp HHHHTTCSEEEEC-CBCTTSSBCH--HHHHHHH----HHH--TTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCE
T ss_pred HHHHcCCCEEEEe-eECCCCCcCH--HHHHHHH----HHh--CCCeEEEECchhccCCcCHHHHHHHHHHcCCCE
Confidence 4567899999999 5788998873 2333333 222 2789988 4776 55688889999988755
No 40
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=65.29 E-value=35 Score=28.08 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=35.1
Q ss_pred CceEEEEecCCCeEEEEEecCc---eee---eeeeeeccc----h---hHHHHHHHHHHH---cCCCEEEEeecCCCCCC
Q 026881 62 GGFSLGVDLGLSRTGLALSKGF---CVR---PLTVLKLRG----E---KLELQLLEIAQR---EETDEFIIGLPKSWDGS 125 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~~---~A~---Pl~~i~~~~----~---~~~~~L~~li~e---~~i~~IVVGLPl~~dGt 125 (231)
...++|||.|+-.|=+++.|.. +.. +-..+.... + ..+.++.+.+.. ..+..+|+..|......
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~ 106 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGR 106 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---
T ss_pred CCEEEEEEcccceEEEEEECCCCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHH
Confidence 4579999999999999987742 211 111121110 1 122333333332 35678999999865443
No 41
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=65.25 E-value=2.5 Score=37.19 Aligned_cols=19 Identities=32% Similarity=0.622 Sum_probs=16.6
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.++|||+|+..+++|+.+
T Consensus 2 ~~~vGIDlGTt~s~va~~~ 20 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMD 20 (383)
T ss_dssp -CCCEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCCEEEEEEE
Confidence 3589999999999999986
No 42
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=64.17 E-value=3.7 Score=38.95 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=18.6
Q ss_pred CCceEEEEecCCCeEEEEEec
Q 026881 61 RGGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 61 ~~g~iLglD~G~kRIGvAvsD 81 (231)
.++.++|||+|+..++||+.+
T Consensus 2 ~m~~~iGIDlGTt~s~va~~~ 22 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQ 22 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEEC
T ss_pred CCCCEEEEEeCcccEEEEEEE
Confidence 456799999999999999987
No 43
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=63.77 E-value=22 Score=31.28 Aligned_cols=61 Identities=11% Similarity=0.212 Sum_probs=44.2
Q ss_pred HHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEE---ecCCCcHHHHHHHHHHcCCCc
Q 026881 105 IAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYL---LDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 105 li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~l---vDER~TT~eA~~~l~e~G~~r 174 (231)
.+++.++++||+| -++.||+... ..++++. ... .+++++| +|+----.+|.+.|.+.|+.|
T Consensus 81 ~~~~~GadGvV~G-~Lt~dg~iD~--~~~~~Li----~~a--~~~~vTFHRAfD~~~d~~~ale~L~~lG~~r 144 (256)
T 1twd_A 81 TVRELGFPGLVTG-VLDVDGNVDM--PRMEKIM----AAA--GPLAVTFHRAFDMCANPLYTLNNLAELGIAR 144 (256)
T ss_dssp HHHHTTCSEEEEC-CBCTTSSBCH--HHHHHHH----HHH--TTSEEEECGGGGGCSCHHHHHHHHHHHTCCE
T ss_pred HHHHcCCCEEEEe-eECCCCCcCH--HHHHHHH----HHh--CCCcEEEECchhccCCHHHHHHHHHHcCCCE
Confidence 4567899999999 5788998873 2333333 222 2789998 477777788999999988754
No 44
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=63.26 E-value=52 Score=27.81 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=48.9
Q ss_pred eEEEEecCCCeEEEEEec-Cc-eeeeee-eeec-c-c-hhHHHHHHHHHHH------cCCCEEEEeecCCCCCCCChhHH
Q 026881 64 FSLGVDLGLSRTGLALSK-GF-CVRPLT-VLKL-R-G-EKLELQLLEIAQR------EETDEFIIGLPKSWDGSETPQSN 131 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD-~~-~A~Pl~-~i~~-~-~-~~~~~~L~~li~e------~~i~~IVVGLPl~~dGt~s~~~~ 131 (231)
+++|||.|..+|=+++.| +. +.+-.. +-.. . + +...+.|.+.+++ ..+..|.||.|=-. ...
T Consensus 1 ~~lgiDiGGT~~~~~l~d~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~~igig~pG~~--~~~---- 74 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAKEGKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAIGQKASSIRAVYFYGAGCT--PAK---- 74 (291)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHHTTSTTTCCEEEEEETTCC--TTT----
T ss_pred CEEEEEeCccceEEEEEeCCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHhCCCcccccEEEEECCCCC--hHH----
Confidence 379999999999999987 21 222111 1101 1 1 2233444444432 35888999988431 111
Q ss_pred HHHHHHHHHHHHhccCC--CcEEEecCCCcH
Q 026881 132 KVRSVAGRLAVRAAERG--WRVYLLDEHRTS 160 (231)
Q Consensus 132 ~v~~Fa~~L~~~~~~~~--lpV~lvDER~TT 160 (231)
...+.+.|++++ + .||++.+--...
T Consensus 75 -~~~l~~~l~~~~---~~~~pv~v~NDa~~a 101 (291)
T 1zbs_A 75 -APMLNEALDSML---PHCDRIEVAGDMLGA 101 (291)
T ss_dssp -HHHHHHHHHHHS---TTCSEEEEECHHHHH
T ss_pred -HHHHHHHHHHhc---CCCCcEEEeCcHHHH
Confidence 125666677664 5 588877654443
No 45
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=61.13 E-value=4 Score=36.19 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=17.4
Q ss_pred CceEEEEecCCCeEEEEEec
Q 026881 62 GGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD 81 (231)
.+.++|||+|+..+++|+.+
T Consensus 22 ~~~viGID~GTt~s~va~~~ 41 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQ 41 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEE
T ss_pred cCCEEEEEcCCccEEEEEEE
Confidence 35799999999999999876
No 46
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=61.01 E-value=5 Score=35.73 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=17.1
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..++|||+|+.++++|+..
T Consensus 13 ~~vvGIDlGTt~s~va~~~ 31 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTV 31 (409)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEcCCCeEEEEEEe
Confidence 5799999999999999864
No 47
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=60.91 E-value=4.7 Score=35.37 Aligned_cols=19 Identities=37% Similarity=0.648 Sum_probs=17.4
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.++|||+|+..+++|+.+
T Consensus 18 ~~viGID~GTt~s~va~~~ 36 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK 36 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC
T ss_pred CCEEEEEeCcCcEEEEEEE
Confidence 5789999999999999876
No 48
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=60.31 E-value=42 Score=24.10 Aligned_cols=89 Identities=13% Similarity=0.184 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ- 178 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK- 178 (231)
.+..+.+.+..++.||+.+-+ .+..+ .++++.|++.....++||+++-...+...+.+.+ +.|...-..|
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l--~~~~g------~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~-~~ga~~~l~Kp 111 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGL--PIANG------FEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCM-AAGASSVVDKS 111 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTC--GGGCH------HHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHH-HTTCSEEEECC
T ss_pred HHHHHHhhcCCCCEEEEeCCC--CCCCH------HHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECC
Confidence 345556677899999998543 22222 4566777752111378999888777766655544 5565443333
Q ss_pred C-CCcHHHHHH--HHHHHHccc
Q 026881 179 T-KTDAYAAVI--LLERYFSMS 197 (231)
Q Consensus 179 ~-~vD~lAA~I--ILq~yLd~~ 197 (231)
- ..+.+.+++ ++++|....
T Consensus 112 ~~~~~~l~~~i~~~l~~~~~~~ 133 (144)
T 3kht_A 112 SNNVTDFYGRIYAIFSYWLTVN 133 (144)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTS
T ss_pred CCcHHHHHHHHHHHHHHHHhcc
Confidence 2 455665555 566776554
No 49
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=59.97 E-value=28 Score=30.73 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=42.8
Q ss_pred EEEecCCCeEEEEEec-Cceeeeeeeeeccch---hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChh----HHHHHHHH
Q 026881 66 LGVDLGLSRTGLALSK-GFCVRPLTVLKLRGE---KLELQLLEIAQREETDEFIIGLPKSWDGSETPQ----SNKVRSVA 137 (231)
Q Consensus 66 LglD~G~kRIGvAvsD-~~~A~Pl~~i~~~~~---~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~----~~~v~~Fa 137 (231)
-|+|.|+...+...-= |+.+-.++.+..++. +...++.+.+.+.++++||+. |+.++. ..+-++++
T Consensus 9 ~~~~~~~~~~~~~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~------GtTGE~~~Ls~~Er~~v~ 82 (314)
T 3qze_A 9 SGVDLGTENLYFQSMIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAV------GTTGESATLDVEEHIQVI 82 (314)
T ss_dssp --------------CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEES------SGGGTGGGCCHHHHHHHH
T ss_pred cccccccccccccccCCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC------ccccChhhCCHHHHHHHH
Confidence 4789998887777432 333322233322221 233455555556799999996 555541 11222333
Q ss_pred HHHHHHhccCCCcEEEecCCCcHHHHHHHHHH
Q 026881 138 GRLAVRAAERGWRVYLLDEHRTSAEAVDRMIN 169 (231)
Q Consensus 138 ~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e 169 (231)
+...+... -.+||+.-==..||.+|-+..+.
T Consensus 83 ~~~v~~~~-grvpViaGvg~~st~eai~la~~ 113 (314)
T 3qze_A 83 RRVVDQVK-GRIPVIAGTGANSTREAVALTEA 113 (314)
T ss_dssp HHHHHHHT-TSSCEEEECCCSSHHHHHHHHHH
T ss_pred HHHHHHhC-CCCcEEEeCCCcCHHHHHHHHHH
Confidence 33333221 25888876666788888777553
No 50
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=59.03 E-value=71 Score=29.79 Aligned_cols=87 Identities=15% Similarity=0.129 Sum_probs=50.8
Q ss_pred ceEEEEecCCCeEEEEEecC--c-eeeeeeeeec-------------cchhHHHHHHHHHHH---cCCCEEEEeecCCCC
Q 026881 63 GFSLGVDLGLSRTGLALSKG--F-CVRPLTVLKL-------------RGEKLELQLLEIAQR---EETDEFIIGLPKSWD 123 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~-~A~Pl~~i~~-------------~~~~~~~~L~~li~e---~~i~~IVVGLPl~~d 123 (231)
+.+||||--...+++|+.+. . .+.-...... ..+.+...+.+++++ ..++.|+++.= -
T Consensus 6 m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~~~~~~id~ia~~~g---P 82 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQG---P 82 (540)
T ss_dssp CEEEEEECSSSEEEEEEEETTSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEE---S
T ss_pred ceEEEEEcCccceEEEEEECCCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCHhHCcEEEEecC---C
Confidence 68999999999999999873 2 3322222210 011222334444444 47999998831 1
Q ss_pred CCCChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 124 GSETPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 124 Gt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
|..+. .+.--.+|+.|+... ++|++-|+.
T Consensus 83 G~~~~-l~vg~~~ak~la~~~---~~p~~~v~h 111 (540)
T 3en9_A 83 GLGPS-LRVTATVARTLSLTL---KKPIIGVNH 111 (540)
T ss_dssp SCHHH-HHHHHHHHHHHHHHH---TCCEEEEEH
T ss_pred Cchhh-HHHHHHHHHHHHHHh---CCCeeEecc
Confidence 22222 233456677777653 789998853
No 51
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=58.58 E-value=38 Score=24.21 Aligned_cols=85 Identities=11% Similarity=0.117 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
....+.+.+..++.||+.+ + .+. ....+++.|++..+ ++||+++-...+...+.+.+ +.|...-..|
T Consensus 38 ~~a~~~l~~~~~dlvi~d~-~--~~~------~g~~~~~~l~~~~~--~~pii~ls~~~~~~~~~~~~-~~g~~~~l~k- 104 (142)
T 2qxy_A 38 QEAFTFLRREKIDLVFVDV-F--EGE------ESLNLIRRIREEFP--DTKVAVLSAYVDKDLIINSV-KAGAVDYILK- 104 (142)
T ss_dssp HHHHHHHTTSCCSEEEEEC-T--TTH------HHHHHHHHHHHHCT--TCEEEEEESCCCHHHHHHHH-HHTCSCEEES-
T ss_pred HHHHHHHhccCCCEEEEeC-C--CCC------cHHHHHHHHHHHCC--CCCEEEEECCCCHHHHHHHH-HCCcceeEeC-
Confidence 3445566678999999997 3 221 12456677776543 78998887666655544444 4454433333
Q ss_pred CCcHHHHHHHHHHHHccc
Q 026881 180 KTDAYAAVILLERYFSMS 197 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~~ 197 (231)
.++.-.-.-.++..+...
T Consensus 105 P~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 105 PFRLDYLLERVKKIISST 122 (142)
T ss_dssp SCCHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHhhc
Confidence 344333333455566543
No 52
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=58.35 E-value=39 Score=29.37 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=36.8
Q ss_pred ceEEEEecCCCeEEEEEec-C-ceeeeee-------eeec----cchhHHHHHHHHHHHc--CCCEEEEeecC
Q 026881 63 GFSLGVDLGLSRTGLALSK-G-FCVRPLT-------VLKL----RGEKLELQLLEIAQRE--ETDEFIIGLPK 120 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD-~-~~A~Pl~-------~i~~----~~~~~~~~L~~li~e~--~i~~IVVGLPl 120 (231)
..++|||.|+..|-+++.. + .....+. .+.. +.+.....|++++.+. ++..+++++|-
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~~~~~~~v~~~i~~ 85 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVVTALSN 85 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHHHTCCCCEEEEEECG
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHHcCCCcceEEEEecC
Confidence 3589999999999999875 2 2111111 1211 1123456788888765 56789999874
No 53
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=57.89 E-value=6.2 Score=37.85 Aligned_cols=19 Identities=32% Similarity=0.622 Sum_probs=17.3
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.++|||+|+..++||+.+
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 5799999999999999965
No 54
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=57.85 E-value=62 Score=27.45 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=35.2
Q ss_pred ceEEEEecCCCeEEEEEecCc--ee-eeeeeeeccc-hhHHHHHHHHHH--HcCCCEEEEeec
Q 026881 63 GFSLGVDLGLSRTGLALSKGF--CV-RPLTVLKLRG-EKLELQLLEIAQ--REETDEFIIGLP 119 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~--~A-~Pl~~i~~~~-~~~~~~L~~li~--e~~i~~IVVGLP 119 (231)
.++|+||.|..+|=+|+-|+. .. .-+.+-..++ .++...+..+++ .+.+++++|.-+
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~l~~~~~~~i~~i~IsSV 65 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGKTFRRWRLSTGVFQTEDELFSHLHPLLGDAMREIKGIGVASV 65 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSSSCEEEEEECCTTCCHHHHHHHHHHHHGGGGGGEEEEEEEES
T ss_pred ceEEEEEECCCeEEEEEEECCEEEEEEEecCCCCCCHHHHHHHHHHHHhhccccCCEEEEEcC
Confidence 479999999999999999842 22 1111211112 234456666664 346788888844
No 55
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=57.59 E-value=45 Score=24.77 Aligned_cols=56 Identities=11% Similarity=0.206 Sum_probs=42.8
Q ss_pred CEEEEeecCCCCCCCChh-HHHHHHHHHHHHHHhccCCCcEEEec-CCCcHHHHHHHHHHcCCCc
Q 026881 112 DEFIIGLPKSWDGSETPQ-SNKVRSVAGRLAVRAAERGWRVYLLD-EHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 112 ~~IVVGLPl~~dGt~s~~-~~~v~~Fa~~L~~~~~~~~lpV~lvD-ER~TT~eA~~~l~e~G~~r 174 (231)
..|+|| .||..+. ...+..|++.|+++. ..+.+-+++ ..-|-.+|-+.+.+.|.++
T Consensus 7 alllv~-----HGS~~~~~~~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~ 64 (126)
T 3lyh_A 7 QIILLA-----HGSSDARWCETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQ 64 (126)
T ss_dssp EEEEEE-----CCCSCHHHHHHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCE
T ss_pred EEEEEe-----CCCCCHHHHHHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCE
Confidence 468899 8998874 456889999998875 356677887 6678888888888877643
No 56
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=56.40 E-value=29 Score=25.20 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
.....|.+.++++++|.||+|-. . + ...+ .-..++++-.. ..+||..+-+
T Consensus 89 ~~~~~I~~~a~~~~~dliV~G~~-~-~----~~~~-lgs~~~~vl~~---~~~pVlvv~~ 138 (141)
T 1jmv_A 89 DLGQVLSDAIEQYDVDLLVTGHH-Q-D----FWSK-LMSSTRQVMNT---IKIDMLVVPL 138 (141)
T ss_dssp CHHHHHHHHHHHTTCCEEEEEEC-C-C----CHHH-HHHHHHHHHTT---CCSEEEEEEC
T ss_pred CHHHHHHHHHHhcCCCEEEEeCC-C-c----hhhh-hcchHHHHHhc---CCCCEEEeeC
Confidence 35578899999999999999954 2 2 1212 23455555543 4789988753
No 57
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=53.67 E-value=60 Score=23.53 Aligned_cols=85 Identities=8% Similarity=0.068 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
.+..+.+.+..++.||+.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...-..|
T Consensus 56 ~~al~~l~~~~~dlii~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~K- 123 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEM--PVKTG------LEVLEWIRSEK--LETKVVVVTTFKRAGYFERAV-KAGVDAYVLK- 123 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSC--SSSCH------HHHHHHHHHTT--CSCEEEEEESCCCHHHHHHHH-HTTCSEEEET-
T ss_pred HHHHHHhhccCCCEEEEeCCC--CCCcH------HHHHHHHHHhC--CCCeEEEEeCCCCHHHHHHHH-HCCCcEEEec-
Confidence 345566677899999999644 23222 45666777654 378999888777766655544 4565433333
Q ss_pred CCcHHHHHHHHHHHHcc
Q 026881 180 KTDAYAAVILLERYFSM 196 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~ 196 (231)
.+|.-.-.-.+++.+..
T Consensus 124 p~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 124 ERSIADLMQTLHTVLEG 140 (150)
T ss_dssp TSCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 33333333335555543
No 58
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=52.33 E-value=7.1 Score=36.66 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=18.4
Q ss_pred CceEEEEecCCCeEEEEEec
Q 026881 62 GGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD 81 (231)
.|.+||||+|.-.+=+++.+
T Consensus 60 ~G~~laiDlGGTnirv~lV~ 79 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILIS 79 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEE
Confidence 47899999999999999987
No 59
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=50.64 E-value=31 Score=26.38 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
.....|.++++++++|.||||- .|...-.....-..++++-.. ..+||..+-.
T Consensus 106 ~~~~~I~~~a~~~~~DLIV~G~----~g~~~~~~~~lGSva~~vl~~---a~~PVlvV~~ 158 (163)
T 1tq8_A 106 APVDALVNLADEEKADLLVVGN----VGLSTIAGRLLGSVPANVSRR---AKVDVLIVHT 158 (163)
T ss_dssp SHHHHHHHHHHHTTCSEEEEEC----CCCCSHHHHHTBBHHHHHHHH---TTCEEEEECC
T ss_pred CHHHHHHHHHHhcCCCEEEECC----CCCCcccceeeccHHHHHHHh---CCCCEEEEeC
Confidence 4567899999999999999993 233221111112234555544 3689988853
No 60
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=50.51 E-value=7.4 Score=37.33 Aligned_cols=19 Identities=32% Similarity=0.622 Sum_probs=16.1
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.++|||+|+..++||+.+
T Consensus 2 ~~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp --CEEEECCSSEEEEEEEE
T ss_pred CCEEEEEcCCcCEEEEEEE
Confidence 4689999999999999986
No 61
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=49.76 E-value=9.8 Score=35.43 Aligned_cols=19 Identities=26% Similarity=0.496 Sum_probs=17.1
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.++|||+|+..+++|+.+
T Consensus 2 ~~~iGIDlGTt~s~va~~~ 20 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLE 20 (509)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEcCCceEEEEEEE
Confidence 4689999999999999876
No 62
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=48.57 E-value=25 Score=26.32 Aligned_cols=54 Identities=17% Similarity=0.190 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
.....|.++++++++|.||+|-.-. .+-.. ...-..++++-.. ..+||..+-..
T Consensus 107 ~~~~~I~~~a~~~~~dlIV~G~~g~-~~~~~---~~~GSv~~~vl~~---~~~pVlvv~~~ 160 (162)
T 1mjh_A 107 IPHEEIVKIAEDEGVDIIIMGSHGK-TNLKE---ILLGSVTENVIKK---SNKPVLVVKRK 160 (162)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCS-SCCTT---CSSCHHHHHHHHH---CCSCEEEECCC
T ss_pred CHHHHHHHHHHHcCCCEEEEcCCCC-CCccc---eEecchHHHHHHh---CCCCEEEEeCC
Confidence 4567899999999999999995321 11100 0011223344443 37899888643
No 63
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=48.46 E-value=69 Score=22.64 Aligned_cols=63 Identities=6% Similarity=0.125 Sum_probs=38.9
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
+..+.+.+..++.|++.+- |.|..+ .++++.|++.. ..+||+++-..-+...+.+.+ +.|...
T Consensus 40 ~al~~~~~~~~dlvilD~~--lp~~~g------~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~-~~ga~~ 102 (133)
T 3b2n_A 40 DAMKLIEEYNPNVVILDIE--MPGMTG------LEVLAEIRKKH--LNIKVIIVTTFKRPGYFEKAV-VNDVDA 102 (133)
T ss_dssp HHHHHHHHHCCSEEEECSS--CSSSCH------HHHHHHHHHTT--CSCEEEEEESCCCHHHHHHHH-HTTCSE
T ss_pred HHHHHHhhcCCCEEEEecC--CCCCCH------HHHHHHHHHHC--CCCcEEEEecCCCHHHHHHHH-HcCCcE
Confidence 3445556678999999853 333332 34566676653 378999887766666555554 455443
No 64
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=48.17 E-value=35 Score=29.49 Aligned_cols=43 Identities=7% Similarity=0.137 Sum_probs=34.1
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
..+..+.+.++++.+++. +++++|+++..++..|+.+-.+.|.
T Consensus 210 ~eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~la~~~g~ 252 (286)
T 3gi1_A 210 QEPSPRQLKEIQDFVKEY----NVKTIFAEDNVNPKIAHAIAKSTGA 252 (286)
T ss_dssp --CCHHHHHHHHHHHHHT----TCCEEEECTTSCTHHHHHHHHTTTC
T ss_pred CCCCHHHHHHHHHHHHHc----CCCEEEEeCCCChHHHHHHHHHhCC
Confidence 345678888888888764 8999999999999999877777665
No 65
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=47.83 E-value=35 Score=29.03 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=17.1
Q ss_pred eEEEEecCCCeEEEEEec
Q 026881 64 FSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD 81 (231)
.+||||.|..+|=+++.|
T Consensus 12 ~~lGiDiGgT~i~~~l~d 29 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHA 29 (305)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCccceEEEEEc
Confidence 699999999999999998
No 66
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=47.41 E-value=72 Score=22.48 Aligned_cols=85 Identities=8% Similarity=0.027 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
.+..+.+++..++.||+.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...-..|
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~k- 108 (137)
T 3hdg_A 41 EEGERLFGLHAPDVIITDIRM--PKLGG------LEMLDRIKAGG--AKPYVIVISAFSEMKYFIKAI-ELGVHLFLPK- 108 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSSC--SSSCH------HHHHHHHHHTT--CCCEEEECCCCCCHHHHHHHH-HHCCSEECCS-
T ss_pred HHHHHHHhccCCCEEEEeCCC--CCCCH------HHHHHHHHhcC--CCCcEEEEecCcChHHHHHHH-hCCcceeEcC-
Confidence 345556677899999999643 23222 45667777654 378999988777665555444 4555433333
Q ss_pred CCcHHHHHHHHHHHHcc
Q 026881 180 KTDAYAAVILLERYFSM 196 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~ 196 (231)
.+|.-.=.-.++++++.
T Consensus 109 P~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 109 PIEPGRLMETLEDFRHI 125 (137)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 34443333344555543
No 67
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=45.53 E-value=35 Score=28.48 Aligned_cols=19 Identities=21% Similarity=0.478 Sum_probs=17.0
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.+||||.|+..|=+|+.|
T Consensus 1 M~~lGID~GsT~tk~av~d 19 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILK 19 (276)
T ss_dssp CEEEEEEECSSCEEEEEEE
T ss_pred CeEEEEEcCccEEEEEEEE
Confidence 3689999999999999988
No 68
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=44.95 E-value=85 Score=22.66 Aligned_cols=85 Identities=15% Similarity=0.108 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
.+..+.+.+..++.||+.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...-..|
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~K- 118 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRM--PGMDG------AQVAAAVRSYE--LPTRVLLISAHDEPAIVYQAL-QQGAAGFLLK- 118 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTC--SSSCH------HHHHHHHHHTT--CSCEEEEEESCCCHHHHHHHH-HTTCSEEEET-
T ss_pred HHHHHHHHhcCCCEEEEeCCC--CCCCH------HHHHHHHHhcC--CCCeEEEEEccCCHHHHHHHH-HcCCCEEEec-
Confidence 345556667899999999643 33322 45667777654 378999887777666555444 5565443333
Q ss_pred CCcHHHHHHHHHHHHcc
Q 026881 180 KTDAYAAVILLERYFSM 196 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~ 196 (231)
..+.-.-.-.+++.+..
T Consensus 119 p~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 119 DSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 33333333334555543
No 69
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=44.81 E-value=86 Score=22.66 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ- 178 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK- 178 (231)
....+.+.+..++.||+.+-+ .+..+ ..+++.|++..+ .+||+++-...+...+.+. .+.|...-..|
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l--~~~~g------~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~-~~~g~~~~l~kp 109 (153)
T 3cz5_A 41 GEAYRLYRETTPDIVVMDLTL--PGPGG------IEATRHIRQWDG--AARILIFTMHQGSAFALKA-FEAGASGYVTKS 109 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSCC--SSSCH------HHHHHHHHHHCT--TCCEEEEESCCSHHHHHHH-HHTTCSEEEETT
T ss_pred HHHHHHHhcCCCCEEEEecCC--CCCCH------HHHHHHHHHhCC--CCeEEEEECCCCHHHHHHH-HHCCCcEEEecC
Confidence 344556667889999999644 23222 346667776543 7899888776665555444 45565433223
Q ss_pred CCCcHHHHH
Q 026881 179 TKTDAYAAV 187 (231)
Q Consensus 179 ~~vD~lAA~ 187 (231)
-..+.+.++
T Consensus 110 ~~~~~L~~~ 118 (153)
T 3cz5_A 110 SDPAELVQA 118 (153)
T ss_dssp SCTTHHHHH
T ss_pred CCHHHHHHH
Confidence 234444443
No 70
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=44.21 E-value=1.1e+02 Score=28.33 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=17.6
Q ss_pred CceEEEEecCCCeEEEEEec
Q 026881 62 GGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD 81 (231)
+..+||||+|+..|=+++.|
T Consensus 6 ~~~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCcceEEEEEC
Confidence 45899999999999999988
No 71
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=44.09 E-value=47 Score=25.21 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
.....|.++++++++|.||||-. |..+-.....-..++++-.. ..+||..+-..
T Consensus 111 ~~~~~I~~~a~~~~~DLIVmG~~----g~~~~~~~~~Gsva~~vl~~---a~~pVlvv~~~ 164 (175)
T 2gm3_A 111 DPKDVICQEVKRVRPDFLVVGSR----GLGRFQKVFVGTVSAFCVKH---AECPVMTIKRN 164 (175)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEEC----CCC--------CHHHHHHHH---CSSCEEEEECC
T ss_pred CHHHHHHHHHHHhCCCEEEEeCC----CCChhhhhhcCchHHHHHhC---CCCCEEEEcCC
Confidence 35678999999999999999953 22111111122334455444 36899888643
No 72
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=43.98 E-value=27 Score=25.35 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeec
Q 026881 97 KLELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLP 119 (231)
.....|.+.++++++|.||+|-.
T Consensus 86 ~~~~~I~~~a~~~~~dliV~G~~ 108 (137)
T 2z08_A 86 VPAEAILQAARAEKADLIVMGTR 108 (137)
T ss_dssp SHHHHHHHHHHHTTCSEEEEESS
T ss_pred CHHHHHHHHHHHcCCCEEEECCC
Confidence 45678999999999999999954
No 73
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=43.31 E-value=30 Score=26.12 Aligned_cols=56 Identities=13% Similarity=0.057 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
.....|.++++++++|.||+|-.-. ++-.. ...-..++++-.. ..+||..+-..-+
T Consensus 104 ~~~~~I~~~a~~~~~DlIV~G~~g~-~~~~~---~~~Gsv~~~vl~~---~~~PVlvv~~~~~ 159 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRGK-LSLSH---EFLGSTVMRVLRK---TKKPVLIIKEVDE 159 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCC-CC--T---TCCCHHHHHHHHH---CSSCEEEECCCCC
T ss_pred ChHHHHHHHHHHcCCCEEEECCCCC-Ccccc---ceechHHHHHHHh---CCCCEEEEccCCc
Confidence 4567899999999999999995421 11100 0011234444444 3789998865443
No 74
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=43.08 E-value=27 Score=29.65 Aligned_cols=85 Identities=13% Similarity=0.015 Sum_probs=38.8
Q ss_pred EEEEecCCCeEEEEEec-C-ceeeee-ee--eec-cchhHHH----HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHH
Q 026881 65 SLGVDLGLSRTGLALSK-G-FCVRPL-TV--LKL-RGEKLEL----QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVR 134 (231)
Q Consensus 65 iLglD~G~kRIGvAvsD-~-~~A~Pl-~~--i~~-~~~~~~~----~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~ 134 (231)
++|||.|.-+|=+++.| + ++.+-. .+ ... ..+...+ .+.+++....+..|.||.|=- . .... .
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~igig~pG~-~-~~~~-----~ 74 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLPEGKFNAVYFYGAGC-T-PEKA-----P 74 (291)
T ss_dssp --CEECCTTCEEEEEECSSSEEEEEEECCCCTTTSCSTTTTTTTTC-------------CEEECTTC-C-TTTT-----H
T ss_pred EEEEEeccccEEEEEEcCCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcCcccccEEEEEcCCC-C-HHHH-----H
Confidence 78999999999999987 2 222111 11 100 1112222 233333345688899998842 1 1111 2
Q ss_pred HHHHHHHHHhccCC--CcEEEecCCCc
Q 026881 135 SVAGRLAVRAAERG--WRVYLLDEHRT 159 (231)
Q Consensus 135 ~Fa~~L~~~~~~~~--lpV~lvDER~T 159 (231)
.+.+.|++++ + .||++.+--..
T Consensus 75 ~l~~~l~~~~---~~~~pv~v~NDa~~ 98 (291)
T 1zxo_A 75 VLRRAIADSL---PVIGNIKANSDMLA 98 (291)
T ss_dssp HHHHHHHHHS---CCCSCCEEECSHHH
T ss_pred HHHHHHHHhc---CCCceEEEECcHHH
Confidence 4566677664 5 58888776444
No 75
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=42.87 E-value=68 Score=22.45 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=35.9
Q ss_pred HHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 103 LEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 103 ~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
.+.+.+..++.|++.+-+ .+..+ ..+++.|++..+ ++||+++-...+...+.+.+ +.|...
T Consensus 39 ~~~~~~~~~dlii~d~~l--~~~~g------~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~-~~g~~~ 99 (134)
T 3f6c_A 39 VQRVETLKPDIVIIDVDI--PGVNG------IQVLETLRKRQY--SGIIIIVSAKNDHFYGKHCA-DAGANG 99 (134)
T ss_dssp HHHHHHHCCSEEEEETTC--SSSCH------HHHHHHHHHTTC--CSEEEEEECC---CTHHHHH-HTTCSE
T ss_pred HHHHHhcCCCEEEEecCC--CCCCh------HHHHHHHHhcCC--CCeEEEEeCCCChHHHHHHH-HhCCCE
Confidence 344556789999999654 23222 456777776643 78998887666554444443 456543
No 76
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=41.75 E-value=39 Score=29.67 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=34.6
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+..+.+.++++.+++ .+++++|+++..++..|+.+-.+.|.+
T Consensus 221 ~eps~~~l~~l~~~ik~----~~v~~If~e~~~~~~~~~~ia~e~g~~ 264 (312)
T 2o1e_A 221 QEPSAASLAKLKTYAKE----HNVKVIYFEEIASSKVADTLASEIGAK 264 (312)
T ss_dssp SCCCHHHHHHHHHHTTS----SCCCEEECSSCCCHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHH----cCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 34566777777777764 489999999999999998888777754
No 77
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=41.04 E-value=87 Score=27.81 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=43.0
Q ss_pred HHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe---cCCCcHHHHHHHHHHcCCCc
Q 026881 103 LEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL---DEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 103 ~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv---DER~TT~eA~~~l~e~G~~r 174 (231)
.+.+.+.++++||+|. |+.||+... ..++++.+ .. .+++++|. |+-.+..+|.+.+.+.|+.+
T Consensus 117 I~~~~~~GAdGvVfG~-L~~dg~iD~--~~~~~Li~----~a--~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdr 182 (287)
T 3iwp_A 117 IRLAKLYGADGLVFGA-LTEDGHIDK--ELCMSLMA----IC--RPLPVTFHRAFDMVHDPMAALETLLTLGFER 182 (287)
T ss_dssp HHHHHHTTCSEEEECC-BCTTSCBCH--HHHHHHHH----HH--TTSCEEECGGGGGCSCHHHHHHHHHHHTCSE
T ss_pred HHHHHHcCCCEEEEee-eCCCCCcCH--HHHHHHHH----Hc--CCCcEEEECchhccCCHHHHHHHHHHcCCCE
Confidence 3445578999999994 666887763 23333322 22 26888874 88778899999999877643
No 78
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=40.25 E-value=14 Score=36.06 Aligned_cols=19 Identities=32% Similarity=0.574 Sum_probs=16.8
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
+.++|||+|+..+.||+.+
T Consensus 2 m~~iGIDlGTtns~va~~~ 20 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVAR 20 (675)
T ss_dssp CCCEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 3589999999999999975
No 79
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=40.12 E-value=50 Score=28.32 Aligned_cols=44 Identities=9% Similarity=0.174 Sum_probs=34.8
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+..+.+.++++.+++. +++++|+++..++..|+.+-.+.|.+
T Consensus 208 ~eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~ia~~~g~~ 251 (284)
T 3cx3_A 208 QEPSPRQLTEIQEFVKTY----KVKTIFTESNASSKVAETLVKSTGVG 251 (284)
T ss_dssp CCCCSHHHHHHHHHHHHT----TCCCEEECSSSCCHHHHHHHSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHc----CCCEEEEeCCCCcHHHHHHHHHcCCe
Confidence 345668888888888764 89999999999999988876666643
No 80
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=39.87 E-value=47 Score=29.15 Aligned_cols=44 Identities=7% Similarity=0.064 Sum_probs=35.3
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH-----HHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM-----INMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l-----~e~G~~ 173 (231)
..+..+.+.++++.+++. +++++|+++..++..|+.+- .+.|++
T Consensus 228 ~eps~~~l~~l~~~ik~~----~v~~If~e~~~~~~~~~~la~~~~A~e~gv~ 276 (313)
T 1toa_A 228 SEASAHDMQELAAFIAQR----KLPAIFIESSIPHKNVEALRDAVQARGHVVQ 276 (313)
T ss_dssp SCCCHHHHHHHHHHHHHT----TCSEEEEETTSCTHHHHHHHHHHHTTTCCCE
T ss_pred CCCCHHHHHHHHHHHHHc----CCCEEEEeCCCChHHHHHHHccchhhhcCCc
Confidence 445678888888888764 89999999999999988887 666653
No 81
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=39.21 E-value=1.1e+02 Score=22.34 Aligned_cols=63 Identities=8% Similarity=0.050 Sum_probs=39.2
Q ss_pred HHHHHHHHc--CCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQRE--ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~--~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
+..+.+.+. .++.||+.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+. .+.|...
T Consensus 72 ~al~~l~~~~~~~dliilD~~l--~~~~g------~~~~~~lr~~~--~~~~ii~ls~~~~~~~~~~~-~~~g~~~ 136 (157)
T 3hzh_A 72 EAVIKYKNHYPNIDIVTLXITM--PKMDG------ITCLSNIMEFD--KNARVIMISALGKEQLVKDC-LIKGAKT 136 (157)
T ss_dssp HHHHHHHHHGGGCCEEEECSSC--SSSCH------HHHHHHHHHHC--TTCCEEEEESCCCHHHHHHH-HHTTCSE
T ss_pred HHHHHHHhcCCCCCEEEEeccC--CCccH------HHHHHHHHhhC--CCCcEEEEeccCcHHHHHHH-HHcCCCE
Confidence 344555556 78999998543 33222 45667777654 37899988877666655544 4556543
No 82
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=39.00 E-value=1e+02 Score=21.84 Aligned_cols=63 Identities=13% Similarity=0.083 Sum_probs=38.3
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
...+.+....++.||+.+-+ .|..+ ..+++.|++..+ ..||+++-...+...+.+.+...|..
T Consensus 35 ~a~~~~~~~~~dlvl~D~~l--p~~~g------~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~~ga~ 97 (139)
T 2jk1_A 35 AAIAILEEEWVQVIICDQRM--PGRTG------VDFLTEVRERWP--ETVRIIITGYTDSASMMAAINDAGIH 97 (139)
T ss_dssp HHHHHHHHSCEEEEEEESCC--SSSCH------HHHHHHHHHHCT--TSEEEEEESCTTCHHHHHHHHHTTCC
T ss_pred HHHHHHhcCCCCEEEEeCCC--CCCcH------HHHHHHHHHhCC--CCcEEEEeCCCChHHHHHHHHhhchh
Confidence 34455566789999998543 33332 245666766533 67888876655555566666655543
No 83
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=38.60 E-value=1.4e+02 Score=24.29 Aligned_cols=83 Identities=16% Similarity=0.193 Sum_probs=42.6
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCC--------------cHHHHHH
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHR--------------TSAEAVD 165 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~--------------TT~eA~~ 165 (231)
..+.+.+...++++||+- |... +. ...+.+.+ .++||+++|... ....|-+
T Consensus 55 ~~~~~~l~~~~vdGiIi~-~~~~----~~------~~~~~l~~----~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~ 119 (294)
T 3qk7_A 55 QSLIHLVETRRVDALIVA-HTQP----ED------FRLQYLQK----QNFPFLALGRSHLPKPYAWFDFDNHAGASLAVK 119 (294)
T ss_dssp HHHHHHHHHTCCSEEEEC-SCCS----SC------HHHHHHHH----TTCCEEEESCCCCSSCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEe-CCCC----Ch------HHHHHHHh----CCCCEEEECCCCCCCCCCEEEcChHHHHHHHHH
Confidence 456677777899999985 2221 11 12333443 267887777532 2345556
Q ss_pred HHHHcCCCccc-cCCCCcHHHHHHHHHHHHccc
Q 026881 166 RMINMGLSKSA-RQTKTDAYAAVILLERYFSMS 197 (231)
Q Consensus 166 ~l~e~G~~rkk-rK~~vD~lAA~IILq~yLd~~ 197 (231)
.|.+.|.++-- -....+...+..-++.|.+..
T Consensus 120 ~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al 152 (294)
T 3qk7_A 120 RLLELGHQRIAFVSTDARISYVDQRLQGYVQTM 152 (294)
T ss_dssp HHHHTTCCCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHCCCceEEEEeCCcccchHHHHHHHHHHHH
Confidence 66666543210 011223334444455555543
No 84
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=38.22 E-value=76 Score=27.51 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=35.2
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+..+.+.++.+.+++. +++++|++...++..|+..-.+.|.+
T Consensus 214 ~eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~ia~~~g~~ 257 (294)
T 3hh8_A 214 EEGTPDQISSLIEKLKVI----KPSALFVESSVDRRPMETVSKDSGIP 257 (294)
T ss_dssp CCCCHHHHHHHHHHHHHS----CCSCEEEETTSCSHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHHHHc----CCCEEEEeCCCCcHHHHHHHHHhCCc
Confidence 345678888888888764 89999999999999888777777764
No 85
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=38.22 E-value=1.3e+02 Score=24.35 Aligned_cols=82 Identities=13% Similarity=0.032 Sum_probs=43.3
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCC--------------cHHHHHH
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHR--------------TSAEAVD 165 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~--------------TT~eA~~ 165 (231)
..+.+++...++++||+- |... .. ...+.+.+ .++||+++|... ....|-+
T Consensus 56 ~~~~~~l~~~~vdgiIi~-~~~~---~~-------~~~~~l~~----~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~ 120 (288)
T 3gv0_A 56 VPIRYILETGSADGVIIS-KIEP---ND-------PRVRFMTE----RNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVE 120 (288)
T ss_dssp HHHHHHHHHTCCSEEEEE-SCCT---TC-------HHHHHHHH----TTCCEEEESCCCSSCCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHcCCccEEEEe-cCCC---Cc-------HHHHHHhh----CCCCEEEECCcCCCCCCcEEEeCcHHHHHHHHH
Confidence 466677778899999985 3221 11 12334443 278888877543 2345556
Q ss_pred HHHHcCCCccc-cCCCCcHHHHHHHHHHHHcc
Q 026881 166 RMINMGLSKSA-RQTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 166 ~l~e~G~~rkk-rK~~vD~lAA~IILq~yLd~ 196 (231)
.|.+.|.++-. --...+...+..-++.|.+.
T Consensus 121 ~L~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~ 152 (288)
T 3gv0_A 121 RLAQCGRKRIAVIVPPSRFSFHDHARKGFNRG 152 (288)
T ss_dssp HHHHTTCCEEEEECCCTTSHHHHHHHHHHHHH
T ss_pred HHHHCCCCeEEEEcCCcccchHHHHHHHHHHH
Confidence 66666643210 01223333444455555554
No 86
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=37.94 E-value=19 Score=26.82 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=18.6
Q ss_pred hHHHHHHHH-HHHcCCCEEEEeec
Q 026881 97 KLELQLLEI-AQREETDEFIIGLP 119 (231)
Q Consensus 97 ~~~~~L~~l-i~e~~i~~IVVGLP 119 (231)
.....|.+. ++++++|.||+|-.
T Consensus 105 ~~~~~I~~~~a~~~~~DlIV~G~~ 128 (156)
T 3fg9_A 105 DVDDVILEQVIPEFKPDLLVTGAD 128 (156)
T ss_dssp CHHHHHHHTHHHHHCCSEEEEETT
T ss_pred CHHHHHHHHHHHhcCCCEEEECCC
Confidence 455788888 88999999999943
No 87
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=37.92 E-value=27 Score=25.43 Aligned_cols=23 Identities=22% Similarity=0.419 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeec
Q 026881 97 KLELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLP 119 (231)
.....|.+.++++++|.||+|-.
T Consensus 97 ~~~~~I~~~a~~~~~dliV~G~~ 119 (147)
T 3hgm_A 97 RPSRTIVRFARKRECDLVVIGAQ 119 (147)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSS
T ss_pred CHHHHHHHHHHHhCCCEEEEeCC
Confidence 35578999999999999999954
No 88
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=37.92 E-value=34 Score=24.90 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=18.8
Q ss_pred hHHHHHHH-HHHHcCCCEEEEeec
Q 026881 97 KLELQLLE-IAQREETDEFIIGLP 119 (231)
Q Consensus 97 ~~~~~L~~-li~e~~i~~IVVGLP 119 (231)
.....|.+ .++++++|.||+|-.
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~ 117 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGAT 117 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESC
T ss_pred ChHHHHHHHHHhhcCCCEEEECCC
Confidence 35567888 899999999999943
No 89
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=37.84 E-value=91 Score=22.57 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
...+.+.+..++.||+.+-+ .+..+ ..+++.|+... ..+||+++-...+...+.+.+ +.|...
T Consensus 38 ~a~~~l~~~~~dliild~~l--~~~~g------~~~~~~l~~~~--~~~pii~ls~~~~~~~~~~~~-~~g~~~ 100 (155)
T 1qkk_A 38 EALAGLSADFAGIVISDIRM--PGMDG------LALFRKILALD--PDLPMILVTGHGDIPMAVQAI-QDGAYD 100 (155)
T ss_dssp HHHHTCCTTCCSEEEEESCC--SSSCH------HHHHHHHHHHC--TTSCEEEEECGGGHHHHHHHH-HTTCCE
T ss_pred HHHHHHHhCCCCEEEEeCCC--CCCCH------HHHHHHHHhhC--CCCCEEEEECCCChHHHHHHH-hcCCCe
Confidence 34455556789999999644 23222 34566676654 378998887666655554444 456543
No 90
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=37.74 E-value=68 Score=23.68 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=31.2
Q ss_pred CEEEEeecCCCCCCCChhH-HHHHHHHHHHHHHhccCCCcEEEec--CCCcHHHHHHHH
Q 026881 112 DEFIIGLPKSWDGSETPQS-NKVRSVAGRLAVRAAERGWRVYLLD--EHRTSAEAVDRM 167 (231)
Q Consensus 112 ~~IVVGLPl~~dGt~s~~~-~~v~~Fa~~L~~~~~~~~lpV~lvD--ER~TT~eA~~~l 167 (231)
..|+|| .||..+.+ ..+..+++.|+++++...+.+-|++ ..-|-.+|-+.+
T Consensus 5 alllv~-----HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l 58 (133)
T 2xws_A 5 GLVIVG-----HGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM 58 (133)
T ss_dssp EEEEEE-----CSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC
T ss_pred eEEEEE-----CCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc
Confidence 357888 88887543 4678888888877531123334565 555556555554
No 91
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=37.65 E-value=38 Score=24.79 Aligned_cols=51 Identities=16% Similarity=0.161 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.....|.+.++++++|.||+|-.- ..+-. ...-..++++-.. ..+||..+-
T Consensus 96 ~~~~~I~~~a~~~~~dliV~G~~~----~~~~~-~~~Gs~~~~vl~~---~~~pVlvv~ 146 (150)
T 3tnj_A 96 EPREEIIRIAEQENVDLIVVGSHG----RHGLA-LLLGSTANSVLHY---AKCDVLAVR 146 (150)
T ss_dssp CHHHHHHHHHHHTTCSEEEEEEC-------------CCCHHHHHHHH---CSSEEEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEEecCC----CCCcC-eEecchHHHHHHh---CCCCEEEEe
Confidence 355789999999999999999432 11111 1111224444444 368888774
No 92
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=37.62 E-value=1.3e+02 Score=24.21 Aligned_cols=85 Identities=15% Similarity=0.194 Sum_probs=41.8
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc--------------HHHHHHH
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT--------------SAEAVDR 166 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T--------------T~eA~~~ 166 (231)
.+.+.+...++++||+- |...... ... ..+.+.+.. .++||+++|.... ...|-+.
T Consensus 62 ~~~~~l~~~~vdgiIi~-~~~~~~~-~~~----~~~~~~~~~----~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~ 131 (298)
T 3tb6_A 62 RGLENLLSQHIDGLIVE-PTKSALQ-TPN----IGYYLNLEK----NGIPFAMINASYAELAAPSFTLDDVKGGMMAAEH 131 (298)
T ss_dssp HHHHHHHHTCCSEEEEC-CSSTTSC-CTT----HHHHHHHHH----TTCCEEEESSCCTTCSSCEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEe-ccccccc-CCc----HHHHHHHHh----cCCCEEEEecCcCCCCCCEEEeCcHHHHHHHHHH
Confidence 34444446899999985 3321111 111 123344543 3788888775432 3456666
Q ss_pred HHHcCCCcccc-CCCCcHHHHHHHHHHHHcc
Q 026881 167 MINMGLSKSAR-QTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 167 l~e~G~~rkkr-K~~vD~lAA~IILq~yLd~ 196 (231)
|.+.|.++--- -..-+ ..+..-++.|.+.
T Consensus 132 L~~~G~~~i~~i~~~~~-~~~~~R~~gf~~~ 161 (298)
T 3tb6_A 132 LLSLGHTHMMGIFKADD-TQGVKRMNGFIQA 161 (298)
T ss_dssp HHHTTCCSEEEEEESSS-HHHHHHHHHHHHH
T ss_pred HHHCCCCcEEEEcCCCC-ccHHHHHHHHHHH
Confidence 76666432110 01222 3444445555554
No 93
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=37.40 E-value=1.1e+02 Score=21.93 Aligned_cols=85 Identities=11% Similarity=0.047 Sum_probs=42.7
Q ss_pred HHHHHHHHH-cCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC
Q 026881 100 LQLLEIAQR-EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ 178 (231)
Q Consensus 100 ~~L~~li~e-~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK 178 (231)
....+.+.+ ..++.||+.+-+ .+..+ ..+++.|++..+ .+||+++-..-+...+.+.+ +.|...-..|
T Consensus 39 ~~a~~~l~~~~~~dlvi~d~~l--~~~~g------~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~k 107 (154)
T 2qsj_A 39 SDALAFLEADNTVDLILLDVNL--PDAEA------IDGLVRLKRFDP--SNAVALISGETDHELIRAAL-EAGADGFIPK 107 (154)
T ss_dssp HHHHHHHHTTCCCSEEEECC--------C------HHHHHHHHHHCT--TSEEEEC-----CHHHHHHH-HTTCCBBCCT
T ss_pred HHHHHHHhccCCCCEEEEeCCC--CCCch------HHHHHHHHHhCC--CCeEEEEeCCCCHHHHHHHH-HccCCEEEeC
Confidence 345555666 789999999644 22222 345666766543 78998876555544444433 5565443333
Q ss_pred CCCcHHHHHHHHHHHHcc
Q 026881 179 TKTDAYAAVILLERYFSM 196 (231)
Q Consensus 179 ~~vD~lAA~IILq~yLd~ 196 (231)
.++.-.-.-.++..+..
T Consensus 108 -p~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 108 -SADPQVLIHAVSLILEG 124 (154)
T ss_dssp -TSCHHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHHHcC
Confidence 34433333344555554
No 94
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=37.09 E-value=1.2e+02 Score=27.43 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=37.3
Q ss_pred ceEEEEecCCCeEEEEEecC----cee-----eeeeeeec----cchhHHHHHHHHHHH------cCCCE-EEEeecCC
Q 026881 63 GFSLGVDLGLSRTGLALSKG----FCV-----RPLTVLKL----RGEKLELQLLEIAQR------EETDE-FIIGLPKS 121 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~----~~A-----~Pl~~i~~----~~~~~~~~L~~li~e------~~i~~-IVVGLPl~ 121 (231)
..++|||.|+.+|=+.+.+. ... .|-..+.. +-+.....|++.+++ .++.. +++|+|=+
T Consensus 8 ~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~g~ 86 (419)
T 4a2a_A 8 VFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSSV 86 (419)
T ss_dssp CEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEECCT
T ss_pred CEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEcCC
Confidence 57899999999998887752 111 12111211 112344567776664 37889 99999876
No 95
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=37.08 E-value=75 Score=22.85 Aligned_cols=23 Identities=22% Similarity=0.211 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeec
Q 026881 97 KLELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLP 119 (231)
.....|.+.++++++|.||+|-.
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~ 115 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASH 115 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESS
T ss_pred ChHHHHHHHHHHhCCCEEEEeCC
Confidence 45678999999999999999965
No 96
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.22 E-value=1.1e+02 Score=21.28 Aligned_cols=63 Identities=13% Similarity=0.181 Sum_probs=38.3
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
+..+.+.+..++.||+.+-+. +..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~--~~~g------~~~~~~l~~~~--~~~~ii~~t~~~~~~~~~~~~-~~g~~~ 104 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMP--RMNG------LKLLEHIRNRG--DQTPVLVISATENMADIAKAL-RLGVED 104 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-------C------HHHHHHHHHTT--CCCCEEEEECCCCHHHHHHHH-HHCCSE
T ss_pred HHHHHHhcCCCCEEEEecCCC--CCCH------HHHHHHHHhcC--CCCCEEEEEcCCCHHHHHHHH-HcCCCE
Confidence 445566778899999996542 3222 35666677654 378998887766666555444 455543
No 97
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=36.18 E-value=2.2e+02 Score=26.43 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=33.7
Q ss_pred ceEEEEecCCCeEEEEEec-C---ceee---eeee-eeccchhHHHHHHHHHHHc----CCCEEEEe
Q 026881 63 GFSLGVDLGLSRTGLALSK-G---FCVR---PLTV-LKLRGEKLELQLLEIAQRE----ETDEFIIG 117 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD-~---~~A~---Pl~~-i~~~~~~~~~~L~~li~e~----~i~~IVVG 117 (231)
..+||||+|+..+=+++.| . ++++ |..- ...+....++.+.+.+++- +|.+|-|+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~~~~~~~~I~~Igis 71 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQAGGLDDVSALAVG 71 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCSSSEECTHHHHHHHHHHHHHTTCSTTEEEEEEE
T ss_pred cEEEEEEeccccEEEEEEECCCCeEEEEEEEeCCCCceECHHHHHHHHHHHHHhcCCccCceEEEEe
Confidence 4799999999999999988 3 2332 2210 1112234567788877763 34455454
No 98
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=35.79 E-value=1.5e+02 Score=25.74 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=47.2
Q ss_pred ceEEEEecCCCeEEEEEec-Cc--eee-------------------ee-eeeecc--chhHHHHHHHHHHHc-CCCEEEE
Q 026881 63 GFSLGVDLGLSRTGLALSK-GF--CVR-------------------PL-TVLKLR--GEKLELQLLEIAQRE-ETDEFII 116 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD-~~--~A~-------------------Pl-~~i~~~--~~~~~~~L~~li~e~-~i~~IVV 116 (231)
.++|+||.|..+|=+++-| +. ..+ .. .++-.. .......|...++++ ++.-++|
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~~~~~~r~~t~de~~~~l~~~~~~~i~~viisSV~vp~~~~~l~~~~~~~~~~~p~~v 102 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAARSVAGGLAESDDALVEQLTSQQALPVRACRLVSVRSEQETSQLVARLEQLFPVSALVA 102 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEEECSCHHHHHHHHHHHHHHSSCCCEEC
T ss_pred CcEEEEEeCCCeeEEEEEeCCCEEEEEEEecCHHHHHHHHhcCcccCCCEEEEEECCchHHHHHHHHHHHHHcCCCeEEE
Confidence 4899999999999999977 42 110 11 111111 123445677777666 7777777
Q ss_pred ee-----cCCCCCCCChhHHHHHHHHHHHHHH
Q 026881 117 GL-----PKSWDGSETPQSNKVRSVAGRLAVR 143 (231)
Q Consensus 117 GL-----Pl~~dGt~s~~~~~v~~Fa~~L~~~ 143 (231)
+- ++. +..+++..-=+.+++..+..+
T Consensus 103 ~~~~~~~gl~-~~Y~~P~~lGaDR~~~avaA~ 133 (271)
T 2f9w_A 103 SSGKQLAGVR-NGYLDYQRLGLDRWLALVAAH 133 (271)
T ss_dssp CCCSEETTEE-CCSSSGGGSCHHHHHHHHHHH
T ss_pred eCCCccCCce-ecCCChhhccHHHHHHHHHHH
Confidence 32 222 344555555567777777643
No 99
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=35.77 E-value=1.2e+02 Score=21.59 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=47.1
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHH--HhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAV--RAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ 178 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~--~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK 178 (231)
...+.+.+..++.||+.+-+ .+..+ ..+++.|++ .. ..+||+++-...+...+.+.+ +.|...-..|
T Consensus 43 ~a~~~l~~~~~dlii~d~~l--~~~~g------~~~~~~l~~~~~~--~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~k 111 (147)
T 2zay_A 43 EAVPVAVKTHPHLIITEANM--PKISG------MDLFNSLKKNPQT--ASIPVIALSGRATAKEEAQLL-DMGFIDFIAK 111 (147)
T ss_dssp HHHHHHHHHCCSEEEEESCC--SSSCH------HHHHHHHHTSTTT--TTSCEEEEESSCCHHHHHHHH-HHTCSEEEES
T ss_pred HHHHHHHcCCCCEEEEcCCC--CCCCH------HHHHHHHHcCccc--CCCCEEEEeCCCCHHHHHHHH-hCCCCEEEeC
Confidence 44455666789999999644 23222 356677765 22 378998887776665555444 4555433333
Q ss_pred CCCcHHHHHHHHHHHHcc
Q 026881 179 TKTDAYAAVILLERYFSM 196 (231)
Q Consensus 179 ~~vD~lAA~IILq~yLd~ 196 (231)
.+|.-.-.-.++..+..
T Consensus 112 -p~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 112 -PVNAIRLSARIKRVLKL 128 (147)
T ss_dssp -SCCHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHH
Confidence 34433333334444443
No 100
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=35.76 E-value=50 Score=28.30 Aligned_cols=43 Identities=7% Similarity=0.071 Sum_probs=34.5
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
..+..+.+.++++.+++. +++++|++...++..|+.+-.+.|.
T Consensus 205 ~eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~ia~~~g~ 247 (284)
T 2prs_A 205 IQPGAQRLHEIRTQLVEQ----KATCVFAEPQFRPAVVESVARGTSV 247 (284)
T ss_dssp SCCCHHHHHHHHHHHHHT----TCCEEEECTTSCSHHHHHHTTTSCC
T ss_pred CCCCHHHHHHHHHHHHHc----CCCEEEEeCCCChHHHHHHHHHcCC
Confidence 346678888888888764 8999999999999998887666664
No 101
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.56 E-value=1.9e+02 Score=23.84 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=61.3
Q ss_pred eeeeeeeccchhHHHHHHHHHHHcCCCEEEE-eecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHH
Q 026881 86 RPLTVLKLRGEKLELQLLEIAQREETDEFII-GLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAV 164 (231)
Q Consensus 86 ~Pl~~i~~~~~~~~~~L~~li~e~~i~~IVV-GLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~ 164 (231)
..+.++.....-..+.+.+.+.+++++.|.+ | ++..+.....++++++.|++...+.+++|..=---.|-.-|+
T Consensus 119 ~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~-----S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~~~a~ 193 (215)
T 3ezx_A 119 NGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVG-----SALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSDKWIE 193 (215)
T ss_dssp TSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEE-----ECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCCHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEc-----hhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHH
Confidence 5666765433334578888899999998887 3 344555566788889999876321256776655555543333
Q ss_pred HHHHHcCCCccccCCCCcHHHHHHHHHHHH
Q 026881 165 DRMINMGLSKSARQTKTDAYAAVILLERYF 194 (231)
Q Consensus 165 ~~l~e~G~~rkkrK~~vD~lAA~IILq~yL 194 (231)
+. |- .--..|+..|+-+.++++
T Consensus 194 ~i----Ga----d~~~~dA~~av~~a~~l~ 215 (215)
T 3ezx_A 194 EI----GA----DATAENAAEAAKVALEVM 215 (215)
T ss_dssp HH----TC----CBCCSSHHHHHHHHHHTC
T ss_pred Hh----CC----eEEECCHHHHHHHHHHhC
Confidence 22 32 123579999998888764
No 102
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=35.51 E-value=1e+02 Score=28.36 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=17.0
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..|=+++.|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d 20 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFT 20 (495)
T ss_dssp -CEEEEEECSSEEEEEEEC
T ss_pred cEEEEEeeCCcceEEEEEC
Confidence 3689999999999999998
No 103
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=35.47 E-value=1.1e+02 Score=21.33 Aligned_cols=87 Identities=16% Similarity=0.091 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCC---CCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccc
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWD---GSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSA 176 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~d---Gt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkk 176 (231)
....+.+.+..++.||+.+-+..+ +..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...-.
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g------~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l 107 (140)
T 2qr3_A 37 VSLSTVLREENPEVVLLDMNFTSGINNGNEG------LFWLHEIKRQY--RDLPVVLFTAYADIDLAVRGI-KEGASDFV 107 (140)
T ss_dssp HHHHHHHHHSCEEEEEEETTTTC-----CCH------HHHHHHHHHHC--TTCCEEEEEEGGGHHHHHHHH-HTTCCEEE
T ss_pred HHHHHHHHcCCCCEEEEeCCcCCCCCCCccH------HHHHHHHHhhC--cCCCEEEEECCCCHHHHHHHH-HcCchhee
Confidence 345556667889999999654210 2221 34566676654 378988876655544444433 45654333
Q ss_pred cCCCCcHHHHHHHHHHHHcc
Q 026881 177 RQTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 177 rK~~vD~lAA~IILq~yLd~ 196 (231)
.| .++.-.-.-.++..+..
T Consensus 108 ~k-p~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 108 VK-PWDNQKLLETLLNAASQ 126 (140)
T ss_dssp EE-SCCHHHHHHHHHHHHTC
T ss_pred eC-CCCHHHHHHHHHHHHHh
Confidence 33 34433333344555543
No 104
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=35.46 E-value=1e+02 Score=26.40 Aligned_cols=43 Identities=2% Similarity=-0.031 Sum_probs=33.0
Q ss_pred ChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHH---HcCCC
Q 026881 127 TPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI---NMGLS 173 (231)
Q Consensus 127 s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~---e~G~~ 173 (231)
.+..+.+.++++.+++. +++++|+++..++..|+.+.. +.|.+
T Consensus 195 eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~l~~~a~~~g~~ 240 (282)
T 3mfq_A 195 EVANSDMIETVNLIIDH----NIKAIFTESTTNPERMKKLQEAVKAKGGQ 240 (282)
T ss_dssp CCCHHHHHHHHHHHHHH----TCCEEECBTTSCTHHHHHHHHHHHTTSCC
T ss_pred CCCHHHHHHHHHHHHHc----CCCEEEEeCCCChHHHHHHHHHHHhcCCc
Confidence 45678888888888875 899999999888887776543 45643
No 105
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=35.03 E-value=23 Score=30.95 Aligned_cols=62 Identities=16% Similarity=0.242 Sum_probs=37.9
Q ss_pred ceEEEEecCCCeEEEEEecCc-eeee----eeeeec---cc-----------hh---H-HHHHHHHHHHcCCCEEEEeec
Q 026881 63 GFSLGVDLGLSRTGLALSKGF-CVRP----LTVLKL---RG-----------EK---L-ELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~-~A~P----l~~i~~---~~-----------~~---~-~~~L~~li~e~~i~~IVVGLP 119 (231)
.+||+||+|.+....|..++. ...| ...+.. .+ .. . ..-+..++..+.++.|+|=--
T Consensus 40 ~sIlSID~GikNlAyc~l~~~~~~~p~l~~W~kl~l~~~~~~~~~~k~~~~p~~~~~~a~~Li~~ll~~~~pd~vlIErQ 119 (258)
T 1kcf_A 40 SRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQ 119 (258)
T ss_dssp SSEEEEEECSTTEEEEEEEECTTSCEEEEEEEEECTTSCCTTCCCCCCCCSHHHHHHHHHHHHHHHHHHHCCSEEEEEEC
T ss_pred CcEEEEecCCCceEEEEEccCCCCCCeeecceeeccccccccccccccCcChHHHHHHHHHHHHHhhccCCCCEEEEeec
Confidence 499999999999999998831 1112 111110 00 00 1 122334455689999999987
Q ss_pred CCCCC
Q 026881 120 KSWDG 124 (231)
Q Consensus 120 l~~dG 124 (231)
...+|
T Consensus 120 r~Rs~ 124 (258)
T 1kcf_A 120 RYRSG 124 (258)
T ss_dssp CCCTT
T ss_pred CcccC
Confidence 77677
No 106
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=34.68 E-value=1.2e+02 Score=21.41 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=37.8
Q ss_pred HHHHH--HcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 103 LEIAQ--REETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 103 ~~li~--e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
.+.+. ...++.||+.+-+. +..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...
T Consensus 40 ~~~~~~~~~~~dlvi~d~~l~--~~~g------~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~-~~g~~~ 102 (143)
T 3jte_A 40 LRIFTENCNSIDVVITDMKMP--KLSG------MDILREIKKIT--PHMAVIILTGHGDLDNAILAM-KEGAFE 102 (143)
T ss_dssp HHHHHHTTTTCCEEEEESCCS--SSCH------HHHHHHHHHHC--TTCEEEEEECTTCHHHHHHHH-HTTCSE
T ss_pred HHHHHhCCCCCCEEEEeCCCC--CCcH------HHHHHHHHHhC--CCCeEEEEECCCCHHHHHHHH-HhCcce
Confidence 34444 56899999996542 3222 34666677654 378998887776666555444 456543
No 107
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=34.67 E-value=65 Score=29.85 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=17.8
Q ss_pred CceEEEEecCCCeEEEEEec
Q 026881 62 GGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD 81 (231)
+..+||||+|+..+=+++.|
T Consensus 3 m~~~lgIDiGtts~K~~l~d 22 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYD 22 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCCceEEEEEc
Confidence 35799999999999999988
No 108
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=34.12 E-value=1.1e+02 Score=20.95 Aligned_cols=61 Identities=16% Similarity=0.257 Sum_probs=36.8
Q ss_pred HHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 102 LLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 102 L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+.+.+..++.|++.+-+ .|..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|..
T Consensus 39 a~~~~~~~~~dlvl~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~g~~ 99 (124)
T 1srr_A 39 ALDIVTKERPDLVLLDMKI--PGMDG------IEILKRMKVID--ENIRVIIMTAYGELDMIQESK-ELGAL 99 (124)
T ss_dssp HHHHHHHHCCSEEEEESCC--TTCCH------HHHHHHHHHHC--TTCEEEEEESSCCHHHHHHHH-HHTCC
T ss_pred HHHHHhccCCCEEEEecCC--CCCCH------HHHHHHHHHhC--CCCCEEEEEccCchHHHHHHH-hcChH
Confidence 3444556789999998533 33332 34566676653 378998887666655555444 34543
No 109
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=34.09 E-value=79 Score=27.26 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
..+.|++.+.+.+...|++-.|.++.|..-+ -+.+.++++ + +++ ++.+||-++-
T Consensus 174 d~~~le~~l~~~~~~~vi~~~~~nptG~~~~-l~~l~~la~---~----~~~-~li~De~~~~ 227 (409)
T 3kki_A 174 NCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP-LAELVNISK---E----FGC-ALLVDESHSL 227 (409)
T ss_dssp CHHHHHHHHHHHCSCEEEEESBCTTTCCBCC-HHHHHHHHH---H----HTC-EEEEECTTTT
T ss_pred CHHHHHHHHHhcCCeEEEECCCCCCCCCcCC-HHHHHHHHH---H----cCC-EEEEECCccc
Confidence 3567888888777899999989899998776 334444433 2 244 6678998764
No 110
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=33.99 E-value=1.2e+02 Score=21.12 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=38.9
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
+..+.++++.++.|++.+ +|.|..+ -++++.|++.....++||+++-...+...+.+. .+.|..
T Consensus 37 ~al~~l~~~~~dlvllD~--~~p~~~g------~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~-~~~Ga~ 100 (122)
T 3gl9_A 37 IALEKLSEFTPDLIVLXI--MMPVMDG------FTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLA-LSLGAR 100 (122)
T ss_dssp HHHHHHTTBCCSEEEECS--CCSSSCH------HHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHH-HHTTCS
T ss_pred HHHHHHHhcCCCEEEEec--cCCCCcH------HHHHHHHHhcccccCCCEEEEecCCchHHHHHH-HhcChh
Confidence 344556778999999984 4444443 345666764321136899988776666555444 455544
No 111
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=33.75 E-value=94 Score=28.63 Aligned_cols=19 Identities=21% Similarity=0.351 Sum_probs=17.5
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||.|+..+=+++.|
T Consensus 6 ~~~lgIDiGtts~k~~l~d 24 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFN 24 (501)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEeCccceEEEEEc
Confidence 3799999999999999998
No 112
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=33.10 E-value=67 Score=27.69 Aligned_cols=44 Identities=5% Similarity=0.154 Sum_probs=35.1
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+..+.+.++++.+++. +++++|++...++..|+.+-.+.|.+
T Consensus 219 ~eps~~~l~~l~~~ik~~----~v~~If~e~~~~~~~~~~ia~~~g~~ 262 (291)
T 1pq4_A 219 QEPSAQELKQLIDTAKEN----NLTMVFGETQFSTKSSEAIAAEIGAG 262 (291)
T ss_dssp BCCCHHHHHHHHHHHHTT----TCCEEEEETTSCCHHHHHHHHHHTCE
T ss_pred CCCCHHHHHHHHHHHHHc----CCCEEEEeCCCChHHHHHHHHHcCCe
Confidence 446678888888888754 89999999999999988876777753
No 113
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=32.88 E-value=1.8e+02 Score=26.36 Aligned_cols=92 Identities=15% Similarity=0.165 Sum_probs=40.8
Q ss_pred eEEEEecCCCeEEEEEec--Cce---eeeeeeeeccchhHHHHHHHHHHHcCCCEEEEeecCCCCCCC----ChhHHHHH
Q 026881 64 FSLGVDLGLSRTGLALSK--GFC---VRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWDGSE----TPQSNKVR 134 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD--~~~---A~Pl~~i~~~~~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~----s~~~~~v~ 134 (231)
+++|+|+|...+=+|+.+ +.. -.|+..++ ..+.+.+.|+++..+ ++...|= |-|.- .....-|.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~-~~~~L~~~l~~~~~~--~~~~avt----MTgELaD~f~~k~eGV~ 73 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWK-NNDKLAEVLKTYSND--VSHVALV----TTAELADSYETKKEGVD 73 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC------------------------CCEEEEE----ECCC------CTTHHHH
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcC-CchHHHHHHHHHHhh--hccEEEE----echhhhhhhcCHHHHHH
Confidence 589999999999999765 321 12222332 123344445555443 3444443 45543 33456676
Q ss_pred HHHHHHHHHhccCCCcEEEecCCC---cHHHHHH
Q 026881 135 SVAGRLAVRAAERGWRVYLLDEHR---TSAEAVD 165 (231)
Q Consensus 135 ~Fa~~L~~~~~~~~lpV~lvDER~---TT~eA~~ 165 (231)
..++.+++.| +.||+++.=.. +..+|.+
T Consensus 74 ~I~~~v~~~~---~~~v~i~~~dGG~l~~~~a~~ 104 (334)
T 3cet_A 74 NILNAAESAF---GSNISVFDSNGNFISLESAKT 104 (334)
T ss_dssp HHHHHHHHHH---TTCEEEECSSSCEEETTHHHH
T ss_pred HHHHHHHHhc---CCceEEEecCCCcccHHHHhh
Confidence 6777777766 45777775333 3444443
No 114
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=32.73 E-value=93 Score=28.13 Aligned_cols=59 Identities=14% Similarity=0.229 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCC--C---ChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGS--E---TPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt--~---s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
+...+.+++++++++.|||=+--.+.+. . ......+.++.+.|+....+.++||+++.+
T Consensus 298 l~~~~~~l~~~~~~~lIvID~l~~~~~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsq 361 (444)
T 2q6t_A 298 VRARARRLVSQNQVGLIIIDYLQLMSGPGSGKSGENRQQEIAAISRGLKALARELGIPIIALSQ 361 (444)
T ss_dssp HHHHHHHHHHHSCCCEEEEECGGGCBCC-------CHHHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcChhhcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 4456777888889999999877655433 1 223456677777777655456999999876
No 115
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.64 E-value=1.3e+02 Score=21.30 Aligned_cols=64 Identities=11% Similarity=0.215 Sum_probs=38.6
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
+..+.+.+..++.|++.+ .|.|..+ .++++.|++......+||+++-...+...+.+.+ +.|..
T Consensus 39 ~al~~~~~~~~dlvl~D~--~lp~~~g------~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~-~~ga~ 102 (136)
T 3t6k_A 39 EALQQIYKNLPDALICDV--LLPGIDG------YTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGF-EAGAN 102 (136)
T ss_dssp HHHHHHHHSCCSEEEEES--CCSSSCH------HHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHH-HHTCS
T ss_pred HHHHHHHhCCCCEEEEeC--CCCCCCH------HHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHH-hcCcc
Confidence 344556678999999985 3344333 3456666653212378999887766665554444 44543
No 116
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=32.37 E-value=62 Score=28.41 Aligned_cols=44 Identities=7% Similarity=0.061 Sum_probs=34.4
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+..+.+.++++.+++. +++++|+++..++..|+.+-.+.|.+
T Consensus 221 ~ePs~~~l~~l~~~ik~~----~v~~If~e~~~~~k~~~~ia~e~g~~ 264 (307)
T 3ujp_A 221 QQFTPKQVQTVIEEVKTN----NVPTIFCESTVSDKGQKQVAQATGAR 264 (307)
T ss_dssp SCCCHHHHHHHHHHHHTT----TCSEEEEETTSCSHHHHHTTTTTCCE
T ss_pred CCCCHHHHHHHHHHHHhc----CCcEEEEeCCCChHHHHHHHHHhCCc
Confidence 345567888888888764 89999999999998887776666653
No 117
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=32.19 E-value=1.3e+02 Score=21.02 Aligned_cols=88 Identities=10% Similarity=0.084 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
....+.+.+..++.||+.+-+ .+..+ ..+++.|+.......+||+++-...+...+.+.+ +.|...-..|
T Consensus 44 ~~a~~~l~~~~~dlii~d~~l--~~~~g------~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~k- 113 (143)
T 3cnb_A 44 FDAGDLLHTVKPDVVMLDLMM--VGMDG------FSICHRIKSTPATANIIVIAMTGALTDDNVSRIV-ALGAETCFGK- 113 (143)
T ss_dssp HHHHHHHHHTCCSEEEEETTC--TTSCH------HHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHH-HTTCSEEEES-
T ss_pred HHHHHHHHhcCCCEEEEeccc--CCCcH------HHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHH-hcCCcEEEeC-
Confidence 344556667889999999643 23222 3466677652111378998887766665544443 5565433333
Q ss_pred CCcHHHHHHHHHHHHccc
Q 026881 180 KTDAYAAVILLERYFSMS 197 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~~ 197 (231)
.++.-.-.-.++..+...
T Consensus 114 P~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 114 PLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp SCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHhh
Confidence 344444344455555543
No 118
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=31.58 E-value=84 Score=28.51 Aligned_cols=58 Identities=17% Similarity=0.166 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCC---ChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 99 ELQLLEIAQREETDEFIIGLPKSWDGSE---TPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~~dGt~---s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
...+.+++.+++++.|||=.+-.+.+.. ......+..+.+.|+....+.+++|+++-+
T Consensus 302 ~~~~~~l~~~~~~~livID~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~~sq 362 (454)
T 2r6a_A 302 RAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQ 362 (454)
T ss_dssp HHHHHHHHTTTCCCEEEEECGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEccHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 3456667777899999999887776432 123456677777776544345899999865
No 119
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=31.46 E-value=68 Score=28.25 Aligned_cols=44 Identities=7% Similarity=0.061 Sum_probs=34.9
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+..+.+.++++.+++. +++++|++...++..|+.+-.+.|.+
T Consensus 235 ~eps~~~l~~l~~~ik~~----~v~~If~e~~~~~~~~~~iA~e~g~~ 278 (321)
T 1xvl_A 235 QQFTPKQVQTVIEEVKTN----NVPTIFCESTVSDKGQKQVAQATGAR 278 (321)
T ss_dssp CSCCHHHHHHHHHHHHTT----TCSEEEEETTSCSHHHHHHHTTTCCE
T ss_pred CCCCHHHHHHHHHHHHHc----CCcEEEEeCCCChHHHHHHHHhcCCc
Confidence 445678888888888754 89999999999999888876666654
No 120
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=31.33 E-value=1.3e+02 Score=25.81 Aligned_cols=56 Identities=13% Similarity=0.014 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.|.+.++..++..|+|-.|-|..|..-+.. .+++.++..++ +++ ++++||-++
T Consensus 170 d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~-~l~~i~~~a~~----~~~-~li~De~~~ 225 (437)
T 3g0t_A 170 LREKLESYLQTGQFCSIIYSNPNNPTWQCMTDE-ELRIIGELATK----HDV-IVIEDLAYF 225 (437)
T ss_dssp HHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHH-HHHHHHHHHHH----TTC-EEEEECTTT
T ss_pred CHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHH-HHHHHHHHHHH----CCc-EEEEEcchh
Confidence 456788888667899999999988888765432 34555554433 354 566888775
No 121
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.29 E-value=1.4e+02 Score=21.01 Aligned_cols=89 Identities=15% Similarity=0.121 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
.+..+.+.+..++.||+.+-+ .+..+ ..+++.|++......+||+++-...+.........+.|...-..|
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l--~~~~g------~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~k- 110 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNL--PDQDG------VSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEK- 110 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCC--SSSCH------HHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECS-
T ss_pred HHHHHHHHhCCCCEEEEeCCC--CCCCH------HHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeC-
Confidence 344556677899999998643 33332 456777775211247899988766554443323334454333233
Q ss_pred CCcHHHHHHHHHHHHccc
Q 026881 180 KTDAYAAVILLERYFSMS 197 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~~ 197 (231)
.++.-.=.-.+++.++..
T Consensus 111 P~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 111 PIDENLLILSLHRAIDNM 128 (140)
T ss_dssp SCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 344444344455555543
No 122
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=30.79 E-value=95 Score=26.28 Aligned_cols=55 Identities=22% Similarity=0.234 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCC---CCCCChh-----------HHHHHHHHHHHHHHhccCCCcEEEe
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSW---DGSETPQ-----------SNKVRSVAGRLAVRAAERGWRVYLL 154 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~---dGt~s~~-----------~~~v~~Fa~~L~~~~~~~~lpV~lv 154 (231)
.+.++.+.+.+.++|.|-||.|+.. ||..-.. ...+-+.++.+++..+ ++|+.+.
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pi~~m 100 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP--DIPFLLM 100 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT--TSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC--CCCEEEE
Confidence 3456667777889999999999963 3322111 1234455666766532 7898875
No 123
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=30.61 E-value=1.2e+02 Score=25.46 Aligned_cols=19 Identities=26% Similarity=0.602 Sum_probs=17.5
Q ss_pred eEEEEecCCCeEEEEEecC
Q 026881 64 FSLGVDLGLSRTGLALSKG 82 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~ 82 (231)
.+||||.|...|-+++.|.
T Consensus 4 ~~lGiD~Gst~~k~~l~d~ 22 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD 22 (270)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEeccceEEEEEEeC
Confidence 6899999999999999883
No 124
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=30.22 E-value=1.4e+02 Score=20.65 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=38.1
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
...+.+....++.+++.+-+ .|..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...
T Consensus 38 ~~~~~~~~~~~dlvi~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~ga~~ 100 (126)
T 1dbw_A 38 AFLAFAPDVRNGVLVTDLRM--PDMSG------VELLRNLGDLK--INIPSIVITGHGDVPMAVEAM-KAGAVD 100 (126)
T ss_dssp HHHHHGGGCCSEEEEEECCS--TTSCH------HHHHHHHHHTT--CCCCEEEEECTTCHHHHHHHH-HTTCSE
T ss_pred HHHHHHhcCCCCEEEEECCC--CCCCH------HHHHHHHHhcC--CCCCEEEEECCCCHHHHHHHH-HhCHHH
Confidence 34455667789999998533 33332 34566676543 378998887666655555544 445443
No 125
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=30.20 E-value=1.1e+02 Score=28.18 Aligned_cols=19 Identities=16% Similarity=0.344 Sum_probs=17.5
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..|=+++.|
T Consensus 2 ~~~lgiDiGtts~k~~l~d 20 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFD 20 (504)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred CEEEEEecCCcceEEEEEC
Confidence 3689999999999999998
No 126
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=30.16 E-value=1.5e+02 Score=21.28 Aligned_cols=65 Identities=12% Similarity=0.052 Sum_probs=41.8
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
.+..+.+.+..++.||+.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+.+...|...
T Consensus 48 ~~a~~~l~~~~~dlvi~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g~~~~ 112 (153)
T 3hv2_A 48 TQALQLLASREVDLVISAAHL--PQMDG------PTLLARIHQQY--PSTTRILLTGDPDLKLIAKAINEGEIYR 112 (153)
T ss_dssp HHHHHHHHHSCCSEEEEESCC--SSSCH------HHHHHHHHHHC--TTSEEEEECCCCCHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHcCCCCEEEEeCCC--CcCcH------HHHHHHHHhHC--CCCeEEEEECCCCHHHHHHHHhCCCcce
Confidence 344556677899999999644 23222 35666777654 3789999988777766665554432443
No 127
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=29.96 E-value=33 Score=26.00 Aligned_cols=24 Identities=13% Similarity=0.317 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHHcCCCEEEEeec
Q 026881 96 EKLELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 96 ~~~~~~L~~li~e~~i~~IVVGLP 119 (231)
......|.+.++++++|.||+|-.
T Consensus 103 G~~~~~I~~~a~~~~~DLIV~G~~ 126 (155)
T 3dlo_A 103 KEPPDDIVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp SCHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHHHHcCCCEEEECCC
Confidence 345678999999999999999953
No 128
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.88 E-value=1.7e+02 Score=23.40 Aligned_cols=82 Identities=12% Similarity=0.112 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc---------------HHHHH
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT---------------SAEAV 164 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T---------------T~eA~ 164 (231)
..+.+.+...++++||+- |...+ . ...+.+.+ .++||+++|.... ...|-
T Consensus 59 ~~~~~~~~~~~vdgiIi~-~~~~~---~-------~~~~~l~~----~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~ 123 (292)
T 3k4h_A 59 NGVVKMVQGRQIGGIILL-YSREN---D-------RIIQYLHE----QNFPFVLIGKPYDRKDEITYVDNDNYTAAREVA 123 (292)
T ss_dssp HHHHHHHHTTCCCEEEES-CCBTT---C-------HHHHHHHH----TTCCEEEESCCSSCTTTSCEEECCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEe-CCCCC---h-------HHHHHHHH----CCCCEEEECCCCCCCCCCCEEEECcHHHHHHHH
Confidence 456666677899999984 32211 1 12344443 3788888875432 34555
Q ss_pred HHHHHcCCCcccc-CCCCcHHHHHHHHHHHHcc
Q 026881 165 DRMINMGLSKSAR-QTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 165 ~~l~e~G~~rkkr-K~~vD~lAA~IILq~yLd~ 196 (231)
+.|.+.|.++-.- -...+...+..-++.|.+.
T Consensus 124 ~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~ 156 (292)
T 3k4h_A 124 EYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDA 156 (292)
T ss_dssp HHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHH
T ss_pred HHHHHCCCceEEEEeCcccchhHHHHHHHHHHH
Confidence 5666665432100 1223333444445555544
No 129
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=29.75 E-value=1.2e+02 Score=27.78 Aligned_cols=59 Identities=12% Similarity=0.064 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCC--ChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSE--TPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~--s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
+...+.+++++++++.|||=.=-.+.... ......+.++...|+....+++++|+++.+
T Consensus 342 i~~~i~~~~~~~~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~~q 402 (503)
T 1q57_A 342 LLAKLAYMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICH 402 (503)
T ss_dssp HHHHHHHHHHTTCCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEEEEc
Confidence 44567777778899999997332232221 234456777777777655556999999865
No 130
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=29.72 E-value=1.1e+02 Score=28.25 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=17.6
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..+=+++.|
T Consensus 3 ~~~lgIDiGtts~k~~l~d 21 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMD 21 (510)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEcCCcceEEEEEC
Confidence 4799999999999999998
No 131
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=29.52 E-value=41 Score=23.40 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=15.0
Q ss_pred ceEEEEecCCCeEEEEEe
Q 026881 63 GFSLGVDLGLSRTGLALS 80 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvs 80 (231)
..+.-+|+|..|||+|-.
T Consensus 69 ~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 69 PYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred cEEEEEECCCCEEEEEEc
Confidence 456789999999999953
No 132
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=29.46 E-value=1.2e+02 Score=27.86 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=17.4
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..|=+++.|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d 21 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFD 21 (497)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEecCCchhEEEEEC
Confidence 4699999999999999998
No 133
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=28.95 E-value=1.8e+02 Score=24.12 Aligned_cols=53 Identities=11% Similarity=-0.031 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.|.+.+.++++..||+=.|-++.|...+. +.+.+++ ++ +++ ++++||.++
T Consensus 159 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l-~~i~~l~---~~----~~~-~li~Dea~~ 211 (397)
T 3f9t_A 159 DEKFVKDAVEDYDVDGIIGIAGTTELGTIDNI-EELSKIA---KE----NNI-YIHVDAAFG 211 (397)
T ss_dssp CHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCH-HHHHHHH---HH----HTC-EEEEECTTG
T ss_pred CHHHHHHHHhhcCCeEEEEECCCCCCCCCCCH-HHHHHHH---HH----hCC-eEEEEcccc
Confidence 35678888887688899999999999988663 2333332 22 244 577899886
No 134
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.94 E-value=1.4e+02 Score=20.29 Aligned_cols=61 Identities=7% Similarity=0.061 Sum_probs=36.8
Q ss_pred HHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 102 LLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 102 L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+.+.+..++.|++.+-+ .+..+ ..+++.|++.. ..+||+++-..-+...+.+.+ +.|..
T Consensus 39 a~~~~~~~~~dlil~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~g~~ 99 (120)
T 1tmy_A 39 AVEKYKELKPDIVTMDITM--PEMNG------IDAIKEIMKID--PNAKIIVCSAMGQQAMVIEAI-KAGAK 99 (120)
T ss_dssp HHHHHHHHCCSEEEEECSC--GGGCH------HHHHHHHHHHC--TTCCEEEEECTTCHHHHHHHH-HTTCC
T ss_pred HHHHHHhcCCCEEEEeCCC--CCCcH------HHHHHHHHhhC--CCCeEEEEeCCCCHHHHHHHH-HhCcc
Confidence 3344566789999998643 22222 34566676653 378998887666655554444 45544
No 135
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=28.69 E-value=2.2e+02 Score=22.65 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=44.4
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-C
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ-T 179 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK-~ 179 (231)
+..+.+.+..+|.||+.+- |.|..+ .++++.|++.. ..+||+++-..-+...+.+. .+.|...-..| -
T Consensus 58 ~al~~~~~~~~dlvllD~~--lp~~~g------~~~~~~lr~~~--~~~~ii~lt~~~~~~~~~~~-~~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 58 QALDRARETRPDAVILDVX--MPGMDG------FGVLRRLRADG--IDAPALFLTARDSLQDKIAG-LTLGGDDYVTKPF 126 (250)
T ss_dssp HHHHHHHHHCCSEEEEESC--CSSSCH------HHHHHHHHHTT--CCCCEEEEECSTTHHHHHHH-HTSTTCEEEESSC
T ss_pred HHHHHHHhCCCCEEEEeCC--CCCCCH------HHHHHHHHhcC--CCCCEEEEECCCCHHHHHHH-HHcCCcEEEeCCC
Confidence 4445566788999999853 333332 34666777653 37899988776665554443 45554333223 2
Q ss_pred CCcHHHHHH
Q 026881 180 KTDAYAAVI 188 (231)
Q Consensus 180 ~vD~lAA~I 188 (231)
..+.+.+.+
T Consensus 127 ~~~~L~~~i 135 (250)
T 3r0j_A 127 SLEEVVARL 135 (250)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 334444443
No 136
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=28.69 E-value=1.5e+02 Score=20.72 Aligned_cols=63 Identities=11% Similarity=0.066 Sum_probs=38.0
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
+..+.+.+..++.|++.+-+ .|..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...
T Consensus 38 ~al~~~~~~~~dlvl~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~ga~~ 100 (132)
T 3crn_A 38 EGLAKIENEFFNLALFXIKL--PDMEG------TELLEKAHKLR--PGMKKIMVTGYASLENSVFSL-NAGADA 100 (132)
T ss_dssp HHHHHHHHSCCSEEEECSBC--SSSBH------HHHHHHHHHHC--TTSEEEEEESCCCHHHHHHHH-HTTCSE
T ss_pred HHHHHHhcCCCCEEEEecCC--CCCch------HHHHHHHHhhC--CCCcEEEEeccccHHHHHHHH-hccchh
Confidence 34455567889999998644 23222 24556666543 378998887666655555444 455433
No 137
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=28.53 E-value=2.4e+02 Score=24.51 Aligned_cols=83 Identities=14% Similarity=0.076 Sum_probs=51.1
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeee---c------cc----h-------hHHHHHHHHHHHcCCCEEE-Eeec
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLK---L------RG----E-------KLELQLLEIAQREETDEFI-IGLP 119 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~---~------~~----~-------~~~~~L~~li~e~~i~~IV-VGLP 119 (231)
.++-+||.|+--|=+.|.+. -...++.... + .+ . .......+++++++++.+. |+
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~~v~~vA-- 81 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVVHVIATG-- 81 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE--
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEe--
Confidence 36889999999999999872 1122222111 0 00 0 1234566777889998664 55
Q ss_pred CCCCCCCC-hhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 120 KSWDGSET-PQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 120 l~~dGt~s-~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
|.. ..+.-...|.+++++.+ +++|..++
T Consensus 82 -----TsA~R~A~N~~~fl~~i~~~t---G~~i~vIs 110 (315)
T 3mdq_A 82 -----TSAVRSGSNKQVLIDRIKKEV---NIDVEVID 110 (315)
T ss_dssp -----CHHHHHCTTHHHHHHHHHHHH---CCCEEECC
T ss_pred -----eHHHHcCcCHHHHHHHHHHHH---CCCeEEeC
Confidence 211 12233468999998774 89998887
No 138
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=28.42 E-value=2.2e+02 Score=22.45 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=41.7
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc--------------HHHHHHH
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT--------------SAEAVDR 166 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T--------------T~eA~~~ 166 (231)
.+.+.+...++++||+- |..... .+ ..+.+.+ .++||+++|.... ...|-+.
T Consensus 49 ~~~~~l~~~~vdgiIi~-~~~~~~--~~-------~~~~~~~----~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~ 114 (272)
T 3o74_A 49 QLQQLFRARRCDALFVA-SCLPPE--DD-------SYRELQD----KGLPVIAIDRRLDPAHFCSVISDDRDASRQLAAS 114 (272)
T ss_dssp HHHHHHHHTTCSEEEEC-CCCCSS--CC-------HHHHHHH----TTCCEEEESSCCCTTTCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEe-cCcccc--HH-------HHHHHHH----cCCCEEEEccCCCccccCEEEEchHHHHHHHHHH
Confidence 44455556799999985 333111 11 2233443 2788888875543 3445555
Q ss_pred HHHcCCCcccc-CCCCcHHHHHHHHHHHHcccC
Q 026881 167 MINMGLSKSAR-QTKTDAYAAVILLERYFSMSG 198 (231)
Q Consensus 167 l~e~G~~rkkr-K~~vD~lAA~IILq~yLd~~~ 198 (231)
|.+.|.++--- ....+......-++.|.+...
T Consensus 115 L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~ 147 (272)
T 3o74_A 115 LLSSAPRSIALIGARPELSVSQARAGGFDEALQ 147 (272)
T ss_dssp HHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTT
T ss_pred HHHCCCcEEEEEecCCCCccHHHHHHHHHHHHH
Confidence 66655322100 122233344445555655443
No 139
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=28.18 E-value=1.6e+02 Score=26.75 Aligned_cols=17 Identities=35% Similarity=0.558 Sum_probs=16.0
Q ss_pred EEEEecCCCeEEEEEec
Q 026881 65 SLGVDLGLSRTGLALSK 81 (231)
Q Consensus 65 iLglD~G~kRIGvAvsD 81 (231)
+||||+|+..|=+++.|
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 79999999999999998
No 140
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=27.69 E-value=1.2e+02 Score=23.67 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=32.2
Q ss_pred CCEEEEeecCCCCCCCCh-hHHHHHHHHHHHHHHhccCCCcEEEec--CCCcHHHHHHHH
Q 026881 111 TDEFIIGLPKSWDGSETP-QSNKVRSVAGRLAVRAAERGWRVYLLD--EHRTSAEAVDRM 167 (231)
Q Consensus 111 i~~IVVGLPl~~dGt~s~-~~~~v~~Fa~~L~~~~~~~~lpV~lvD--ER~TT~eA~~~l 167 (231)
...|+|| .|+..+ ....+.++++.|+++.+...+.+-|++ ..-|-.+|-+.+
T Consensus 25 ~avlLv~-----HGS~~p~~~~~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l 79 (156)
T 1tjn_A 25 RGLVIVG-----HGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM 79 (156)
T ss_dssp EEEEEEE-----CCTTSTTHHHHHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC
T ss_pred cCEEEEE-----CCCCCHHHHHHHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc
Confidence 3568888 888775 445788888888877531123334565 555555555544
No 141
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=27.69 E-value=1.8e+02 Score=24.36 Aligned_cols=56 Identities=11% Similarity=0.222 Sum_probs=39.3
Q ss_pred CEEEEeecCCCCCCCChhHH--HHHHHHHHHHHHhccCCCcEEEe--------------c-CCCcHHHHHHHHHHcCCCc
Q 026881 112 DEFIIGLPKSWDGSETPQSN--KVRSVAGRLAVRAAERGWRVYLL--------------D-EHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 112 ~~IVVGLPl~~dGt~s~~~~--~v~~Fa~~L~~~~~~~~lpV~lv--------------D-ER~TT~eA~~~l~e~G~~r 174 (231)
..++|| .||..+.++ .++.++++++++++ +++|.+- + ..-|-.+|-+.|.+.|..+
T Consensus 4 aillv~-----hGSr~~~~~~~~~~~~~~~v~~~~p--~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~ 76 (264)
T 2xwp_A 4 ALLVVS-----FGTSYHDTCEKNIVACERDLAASCP--DRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQD 76 (264)
T ss_dssp EEEEEE-----CCCSCHHHHHHHHHHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCE
T ss_pred eEEEEE-----CCCCCHHHHHHHHHHHHHHHHHHCC--CCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCE
Confidence 357888 898887654 57889999998875 6676543 1 2367777777787777543
No 142
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=27.62 E-value=2.5e+02 Score=22.86 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=26.4
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHR 158 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~ 158 (231)
..+.+.+...++++||+- |...+ . ...+.+.. .++||+++|...
T Consensus 73 ~~~~~~l~~~~vdgiIi~-~~~~~---~-------~~~~~l~~----~~iPvV~i~~~~ 116 (305)
T 3huu_A 73 HEVKTMIQSKSVDGFILL-YSLKD---D-------PIEHLLNE----FKVPYLIVGKSL 116 (305)
T ss_dssp HHHHHHHHTTCCSEEEES-SCBTT---C-------HHHHHHHH----TTCCEEEESCCC
T ss_pred HHHHHHHHhCCCCEEEEe-CCcCC---c-------HHHHHHHH----cCCCEEEECCCC
Confidence 456666777899999985 22211 1 12334443 378888887554
No 143
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=27.39 E-value=1.5e+02 Score=20.10 Aligned_cols=62 Identities=13% Similarity=0.118 Sum_probs=37.3
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
...+.+.+..++.+++.+-+ .+..+ .++++.|+... ..+||+++-..-+...+.+.+ +.|..
T Consensus 35 ~a~~~~~~~~~dlil~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~g~~ 96 (121)
T 2pl1_A 35 EADYYLNEHIPDIAIVDLGL--PDEDG------LSLIRRWRSND--VSLPILVLTARESWQDKVEVL-SAGAD 96 (121)
T ss_dssp HHHHHHHHSCCSEEEECSCC--SSSCH------HHHHHHHHHTT--CCSCEEEEESCCCHHHHHHHH-HTTCS
T ss_pred HHHHHHhccCCCEEEEecCC--CCCCH------HHHHHHHHhcC--CCCCEEEEecCCCHHHHHHHH-HcCcc
Confidence 34455567889999998533 23222 24566666543 378998887766665555444 44543
No 144
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=27.38 E-value=2.3e+02 Score=22.46 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=25.5
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHH-HHHHHhccCCCcEEEecCCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAG-RLAVRAAERGWRVYLLDEHR 158 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~-~L~~~~~~~~lpV~lvDER~ 158 (231)
..+.+.+...++++||+- |. + ....+ .+.+ .++||+++|...
T Consensus 54 ~~~~~~l~~~~~dgiIi~-~~------~------~~~~~~~l~~----~~iPvV~~~~~~ 96 (277)
T 3e61_A 54 QGYLATFVSHNCTGMIST-AF------N------ENIIENTLTD----HHIPFVFIDRIN 96 (277)
T ss_dssp HHHHHHHHHTTCSEEEEC-GG------G------HHHHHHHHHH----C-CCEEEGGGCC
T ss_pred HHHHHHHHhCCCCEEEEe-cC------C------hHHHHHHHHc----CCCCEEEEeccC
Confidence 345555667899999995 31 1 11233 4543 389999998765
No 145
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=27.34 E-value=1.5e+02 Score=27.14 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCC--EEEEeecCCCCCCC--ChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 98 LELQLLEIAQREETD--EFIIGLPKSWDGSE--TPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 98 ~~~~L~~li~e~~i~--~IVVGLPl~~dGt~--s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
+...+.+++++++++ .|||=+=-.+.+.. ....+.+..+.+.|+....+.++||+++.+
T Consensus 296 i~~~ir~l~~~~~~~~~lIVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsq 358 (444)
T 3bgw_A 296 IWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQ 358 (444)
T ss_dssp HHHHHHHHHHHSCSSCEEEEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 445677788888999 88886443343321 234456777777787655556999999876
No 146
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.12 E-value=1.8e+02 Score=21.06 Aligned_cols=89 Identities=12% Similarity=0.068 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
.+..+.+.+..++.||+.+-+ .+..+ ..+++.|++......+||+++-...+...+.+.+ +.|...-..|
T Consensus 41 ~~al~~l~~~~~dlii~D~~l--~~~~g------~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~-~~g~~~~l~K- 110 (154)
T 3gt7_A 41 REAVRFLSLTRPDLIISDVLM--PEMDG------YALCRWLKGQPDLRTIPVILLTILSDPRDVVRSL-ECGADDFITK- 110 (154)
T ss_dssp HHHHHHHTTCCCSEEEEESCC--SSSCH------HHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHH-HHCCSEEEES-
T ss_pred HHHHHHHHhCCCCEEEEeCCC--CCCCH------HHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHH-HCCCCEEEeC-
Confidence 345556677899999999643 33332 3466667654111378998887666655555444 4555433333
Q ss_pred CCcHHHHHHHHHHHHcccC
Q 026881 180 KTDAYAAVILLERYFSMSG 198 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~~~ 198 (231)
.++.-.-.-.++..+....
T Consensus 111 P~~~~~l~~~i~~~l~~~~ 129 (154)
T 3gt7_A 111 PCKDVVLASHVKRLLSGVK 129 (154)
T ss_dssp SCCHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 4554444445566665543
No 147
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=27.10 E-value=83 Score=23.06 Aligned_cols=46 Identities=11% Similarity=0.178 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
+.|.+++++++++.++|.+|.. + ....++.++.+.. .++.|.++-.
T Consensus 55 ~~l~~~~~~~~id~viia~~~~-----~--~~~~~~i~~~l~~----~gv~v~~vP~ 100 (141)
T 3nkl_A 55 KYLERLIKKHCISTVLLAVPSA-----S--QVQKKVIIESLAK----LHVEVLTIPN 100 (141)
T ss_dssp GGHHHHHHHHTCCEEEECCTTS-----C--HHHHHHHHHHHHT----TTCEEEECCC
T ss_pred HHHHHHHHHCCCCEEEEeCCCC-----C--HHHHHHHHHHHHH----cCCeEEECCC
Confidence 3578888899999999997642 1 1344556666654 4788887754
No 148
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=27.02 E-value=1.9e+02 Score=24.44 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
..+.|.+.+.+ ++..||+-.|-++.|..-+. ..+++.++..++ +++ ++++||-++.
T Consensus 168 d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~-~~l~~i~~~~~~----~~~-~li~Dea~~~ 223 (407)
T 3nra_A 168 DLTGLEEAFKA-GARVFLFSNPNNPAGVVYSA-EEIGQIAALAAR----YGA-TVIADQLYSR 223 (407)
T ss_dssp CHHHHHHHHHT-TCCEEEEESSCTTTCCCCCH-HHHHHHHHHHHH----HTC-EEEEECTTTT
T ss_pred CHHHHHHHHhh-CCcEEEEcCCCCCCCcccCH-HHHHHHHHHHHH----cCC-EEEEEccccc
Confidence 34677777765 78899999998888877653 234555554443 254 4568988763
No 149
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=26.95 E-value=1.7e+02 Score=24.39 Aligned_cols=55 Identities=15% Similarity=0.230 Sum_probs=33.4
Q ss_pred CEEEEeecCCCCCCCChhH-HHHHHHHHHHHHHhccCCCcEEEe--c------------CCCcHHHHHHHHHHcCCC
Q 026881 112 DEFIIGLPKSWDGSETPQS-NKVRSVAGRLAVRAAERGWRVYLL--D------------EHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 112 ~~IVVGLPl~~dGt~s~~~-~~v~~Fa~~L~~~~~~~~lpV~lv--D------------ER~TT~eA~~~l~e~G~~ 173 (231)
..|+|+ .||..+.+ +.+++++++++++++ +++|.+- . ..-|-.+|-+.|.+.|..
T Consensus 11 aillv~-----hGS~~~~~~~~~~~~~~~l~~~~~--~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~ 80 (269)
T 2xvy_A 11 GILLVA-----FGTSVEEARPALDKMGDRVRAAHP--DIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFT 80 (269)
T ss_dssp EEEEEE-----CCCCCTTTTHHHHHHHHHHHHHCT--TSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCC
T ss_pred eEEEEe-----CCCCcHHHHHHHHHHHHHHHHHCC--CCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCC
Confidence 456777 77766543 467777888887764 5666432 2 334556666666666643
No 150
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.87 E-value=1.7e+02 Score=20.71 Aligned_cols=62 Identities=15% Similarity=0.171 Sum_probs=37.6
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
...+.+.+..++.|++.+-+ .|..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|..
T Consensus 39 ~a~~~l~~~~~dlvllD~~l--~~~~g------~~l~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~-~~ga~ 100 (137)
T 3cfy_A 39 DAIQFIERSKPQLIILDLKL--PDMSG------EDVLDWINQND--IPTSVIIATAHGSVDLAVNLI-QKGAE 100 (137)
T ss_dssp HHHHHHHHHCCSEEEECSBC--SSSBH------HHHHHHHHHTT--CCCEEEEEESSCCHHHHHHHH-HTTCS
T ss_pred HHHHHHHhcCCCEEEEecCC--CCCCH------HHHHHHHHhcC--CCCCEEEEEecCcHHHHHHHH-HCCcc
Confidence 34455566789999998644 23222 24566666543 378898887666655555444 45554
No 151
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=26.73 E-value=95 Score=26.11 Aligned_cols=56 Identities=16% Similarity=0.062 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.|.+.+++.++..|+|-.|-++.|..-+. ..+++.++..++ +++ ++++||-++
T Consensus 148 d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~~~~~----~~~-~li~De~~~ 203 (391)
T 3dzz_A 148 NWADLEEKLATPSVRMMVFCNPHNPIGYAWSE-EEVKRIAELCAK----HQV-LLISDEIHG 203 (391)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSBTTTTBCCCH-HHHHHHHHHHHH----TTC-EEEEECTTT
T ss_pred cHHHHHHHHhccCceEEEEECCCCCCCcccCH-HHHHHHHHHHHH----CCC-EEEEecccc
Confidence 35678888876788899999898888876332 224444443333 354 456888776
No 152
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=26.15 E-value=2.7e+02 Score=24.24 Aligned_cols=93 Identities=10% Similarity=0.067 Sum_probs=55.2
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeec--c-c--------------h---hHHHHHHHHHHHcCCCEEE-Eeec
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKL--R-G--------------E---KLELQLLEIAQREETDEFI-IGLP 119 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~--~-~--------------~---~~~~~L~~li~e~~i~~IV-VGLP 119 (231)
+++-+||.|+--|=+.|.+. -...++..... + + + .......+++++++++.+. ++--
T Consensus 12 m~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~~i~~vATs 91 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERVKAVATE 91 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECH
T ss_pred cEEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEcH
Confidence 37899999999999999872 11222222110 0 0 0 1134566677789998555 6611
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 120 l~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
--..+.....|.+++++. .+++|..++. ..||+-.+
T Consensus 92 ------A~R~A~N~~~fl~~v~~~---~G~~i~vIsg---~eEA~l~~ 127 (315)
T 1t6c_A 92 ------AIRRAKNAEEFLERVKRE---VGLVVEVITP---EQEGRYAY 127 (315)
T ss_dssp ------HHHTSTTHHHHHHHHHHH---TCCCEEECCH---HHHHHHHH
T ss_pred ------HHHcCcCHHHHHHHHHHH---HCCCEEEcCH---HHHHHHHH
Confidence 011223446899999876 4899988873 24554444
No 153
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=25.86 E-value=1.5e+02 Score=27.38 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=33.3
Q ss_pred ceEEEEecCCCeEEEEEecC---cee---eeeeeeecc------chhHHHHHHHHHHH---cCCCEEEEee
Q 026881 63 GFSLGVDLGLSRTGLALSKG---FCV---RPLTVLKLR------GEKLELQLLEIAQR---EETDEFIIGL 118 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~---~~A---~Pl~~i~~~------~~~~~~~L~~li~e---~~i~~IVVGL 118 (231)
..+||||+|+..+=+++.|. +++ .|....+.. ....++.+.+.+++ .+|.+|-|+-
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~~~~I~aIgis~ 76 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYADHPVTTIVPVG 76 (482)
T ss_dssp --CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTTTSCCCEEEEEE
T ss_pred ceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 47999999999999999983 222 344332221 12345555555554 5677777654
No 154
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=25.72 E-value=1.6e+02 Score=22.26 Aligned_cols=61 Identities=20% Similarity=0.180 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
+..+.+.+..++.|++.+-+ .|..+ ..+++.|++.. ..+||+++-..-+...+.+.+ +.|.
T Consensus 42 ~al~~~~~~~~dlvl~D~~l--p~~~g------~~~~~~l~~~~--~~~~ii~lt~~~~~~~~~~a~-~~Ga 102 (184)
T 3rqi_A 42 EALKLAGAEKFEFITVXLHL--GNDSG------LSLIAPLCDLQ--PDARILVLTGYASIATAVQAV-KDGA 102 (184)
T ss_dssp HHHHHHTTSCCSEEEECSEE--TTEES------HHHHHHHHHHC--TTCEEEEEESSCCHHHHHHHH-HHTC
T ss_pred HHHHHHhhCCCCEEEEeccC--CCccH------HHHHHHHHhcC--CCCCEEEEeCCCCHHHHHHHH-HhCH
Confidence 34455677889999998544 22222 34566666654 378999888776666555554 4454
No 155
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=25.65 E-value=1.7e+02 Score=23.94 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHH-HHHHHHHHHHHHhccCCCcEEEecC
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSN-KVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~-~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
.....|.+.+++.++|.||+| ....+...+ ..-..++++-.. ..+||..+-.
T Consensus 238 ~~~~~I~~~a~~~~~dLlV~G-----~~~~~~~~~~~~Gs~~~~vl~~---~~~pvLvv~~ 290 (294)
T 3loq_A 238 TPHKAILAKREEINATTIFMG-----SRGAGSVMTMILGSTSESVIRR---SPVPVFVCKR 290 (294)
T ss_dssp CHHHHHHHHHHHTTCSEEEEE-----CCCCSCHHHHHHHCHHHHHHHH---CSSCEEEECS
T ss_pred CHHHHHHHHHHhcCcCEEEEe-----CCCCCCccceeeCcHHHHHHhc---CCCCEEEECC
Confidence 456788889999999999999 322332222 223344555544 3688887743
No 156
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=25.53 E-value=43 Score=30.67 Aligned_cols=21 Identities=29% Similarity=0.306 Sum_probs=18.5
Q ss_pred CCceEEEEecCCCeEEEEEec
Q 026881 61 RGGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 61 ~~g~iLglD~G~kRIGvAvsD 81 (231)
.+..+||||+|+..|=+++.|
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEE
Confidence 455799999999999999988
No 157
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=25.48 E-value=1.7e+02 Score=20.15 Aligned_cols=61 Identities=10% Similarity=0.236 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
+..+.+.+..++.|++.+- |.|..+ .++++.|++. .++||+++-...+...+.+. .+.|..
T Consensus 37 ~al~~~~~~~~dlii~D~~--~p~~~g------~~~~~~lr~~---~~~~ii~~t~~~~~~~~~~~-~~~ga~ 97 (120)
T 3f6p_A 37 EAVEMVEELQPDLILLDIM--LPNKDG------VEVCREVRKK---YDMPIIMLTAKDSEIDKVIG-LEIGAD 97 (120)
T ss_dssp HHHHHHHTTCCSEEEEETT--STTTHH------HHHHHHHHTT---CCSCEEEEEESSCHHHHHHH-HHTTCC
T ss_pred HHHHHHhhCCCCEEEEeCC--CCCCCH------HHHHHHHHhc---CCCCEEEEECCCChHHHHHH-HhCCcc
Confidence 3445567789999999853 333322 3456667653 37898887766665554443 345543
No 158
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.40 E-value=1.3e+02 Score=20.69 Aligned_cols=53 Identities=11% Similarity=0.111 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
.+..+.+.+..++.|++.+-+. +..+ ..+++.|++......+||+++-...+.
T Consensus 37 ~~a~~~l~~~~~dlii~D~~l~--~~~g------~~~~~~l~~~~~~~~~~ii~~s~~~~~ 89 (127)
T 3i42_A 37 TDALHAMSTRGYDAVFIDLNLP--DTSG------LALVKQLRALPMEKTSKFVAVSGFAKN 89 (127)
T ss_dssp HHHHHHHHHSCCSEEEEESBCS--SSBH------HHHHHHHHHSCCSSCCEEEEEECC-CT
T ss_pred HHHHHHHHhcCCCEEEEeCCCC--CCCH------HHHHHHHHhhhccCCCCEEEEECCcch
Confidence 3455566778899999996542 3222 456777776411237888877544443
No 159
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=25.39 E-value=38 Score=29.11 Aligned_cols=18 Identities=33% Similarity=0.471 Sum_probs=15.5
Q ss_pred eEEEEecCCCeEEEEEec
Q 026881 64 FSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD 81 (231)
..+|||+|+..+-+++.+
T Consensus 4 ~~igIDlGT~~s~v~~~~ 21 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRG 21 (344)
T ss_dssp CEEEEEECSSEEEEEETT
T ss_pred ceEEEEcCcCcEEEEECC
Confidence 589999999999988754
No 160
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=25.32 E-value=1.2e+02 Score=27.80 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=17.3
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||.|+..|=+++.|
T Consensus 4 ~~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEEC
Confidence 3689999999999999998
No 161
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=25.22 E-value=1.8e+02 Score=21.92 Aligned_cols=54 Identities=15% Similarity=0.131 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
..+.+.+++.++..|+++-|.............+.+|.+.+++...+.+ +.++|
T Consensus 120 ~~~i~~~~~~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~--~~~vD 173 (216)
T 3rjt_A 120 RHLVATTKPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEH--VPFVD 173 (216)
T ss_dssp HHHHHHHGGGSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHT--CCEEC
T ss_pred HHHHHHHHhcCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcC--CeEEE
Confidence 3444445555777777763333333333345566666666655443335 44555
No 162
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=24.96 E-value=1.9e+02 Score=24.13 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.|.+.+ ..++..|+|-.|-++.|..-+.. .+++.++..++. ++ ++++||-++
T Consensus 145 d~~~l~~~l-~~~~~~v~i~~p~nptG~~~~~~-~l~~l~~~~~~~----~~-~li~De~~~ 199 (383)
T 3kax_A 145 DFEHLEKQF-QQGVKLMLLCSPHNPIGRVWKKE-ELTKLGSLCTKY----NV-IVVADEIHS 199 (383)
T ss_dssp CHHHHHHHH-TTTCCEEEEESSBTTTTBCCCHH-HHHHHHHHHHHH----TC-EEEEECTTT
T ss_pred cHHHHHHHh-CcCCeEEEEeCCCCCCCcCcCHH-HHHHHHHHHHHC----CC-EEEEEcccc
Confidence 346777777 56889999999988888765432 345554444432 54 456788765
No 163
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=24.91 E-value=2.3e+02 Score=23.94 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=34.1
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCC--------------cHHHHH
Q 026881 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHR--------------TSAEAV 164 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~--------------TT~eA~ 164 (231)
...+.+.+...++++||+- |... .. .+.+.+... ++||+++|... ....|-
T Consensus 117 ~~~~~~~l~~~~vdGiIi~-~~~~---~~-------~~~~~l~~~----~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~ 181 (366)
T 3h5t_A 117 HVSAQQLVNNAAVDGVVIY-SVAK---GD-------PHIDAIRAR----GLPAVIADQPAREEGMPFIAPNNRKAIAPAA 181 (366)
T ss_dssp HHHHHHHHHTCCCSCEEEE-SCCT---TC-------HHHHHHHHH----TCCEEEESSCCSCTTCCEEEECHHHHTHHHH
T ss_pred HHHHHHHHHhCCCCEEEEe-cCCC---Ch-------HHHHHHHHC----CCCEEEECCccCCCCCCEEEeChHHHHHHHH
Confidence 3456666777899999986 3211 11 123344432 67777776433 234555
Q ss_pred HHHHHcCCC
Q 026881 165 DRMINMGLS 173 (231)
Q Consensus 165 ~~l~e~G~~ 173 (231)
+.|.+.|.+
T Consensus 182 ~~L~~~G~r 190 (366)
T 3h5t_A 182 QALIDAGHR 190 (366)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHCCCC
Confidence 666666643
No 164
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=24.67 E-value=64 Score=23.20 Aligned_cols=22 Identities=5% Similarity=0.063 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEee
Q 026881 97 KLELQLLEIAQREETDEFIIGL 118 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGL 118 (231)
.....|.+.++++++|.||+|-
T Consensus 96 ~~~~~I~~~a~~~~~dliV~G~ 117 (138)
T 1q77_A 96 PLSEEVKKFVEGKGYELVVWAC 117 (138)
T ss_dssp CHHHHHHHHHTTSCCSEEEECS
T ss_pred CHHHHHHHHHHhcCCCEEEEeC
Confidence 3557888999999999999993
No 165
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=24.64 E-value=1.1e+02 Score=21.84 Aligned_cols=49 Identities=6% Similarity=0.095 Sum_probs=30.0
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
...+.+....++.|++.+-+ .+..+ ..+++.|++..+ .+||+++-..-+
T Consensus 40 ~al~~~~~~~~dlvllD~~l--p~~~g------~~l~~~l~~~~~--~~~ii~ls~~~~ 88 (141)
T 3cu5_A 40 NAIQIALKHPPNVLLTDVRM--PRMDG------IELVDNILKLYP--DCSVIFMSGYSD 88 (141)
T ss_dssp HHHHHHTTSCCSEEEEESCC--SSSCH------HHHHHHHHHHCT--TCEEEEECCSTT
T ss_pred HHHHHHhcCCCCEEEEeCCC--CCCCH------HHHHHHHHhhCC--CCcEEEEeCCCc
Confidence 34445566789999998644 23222 345666766543 789988754433
No 166
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=24.53 E-value=1.2e+02 Score=25.60 Aligned_cols=53 Identities=15% Similarity=0.235 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCEEEEeecCC---CCCCCChh-----------HHHHHHHHHHHHHHhccCCCcEEE
Q 026881 99 ELQLLEIAQREETDEFIIGLPKS---WDGSETPQ-----------SNKVRSVAGRLAVRAAERGWRVYL 153 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~---~dGt~s~~-----------~~~v~~Fa~~L~~~~~~~~lpV~l 153 (231)
+.++.+.+.+.++|.|-||.|+. +||..-+. ...+-..++.+++.+ .++||++
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~--~~~Pv~l 99 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKH--PTIPIGL 99 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--SSSCEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCCCEEE
Confidence 34555666778999999999996 56643221 122335566776552 2688876
No 167
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=24.52 E-value=1.5e+02 Score=25.67 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.|++.+.+.++..|++-.|-++.|..-+. ..+++.++..++ +++ ++.+||-++
T Consensus 182 d~~~le~~i~~~~~~~vil~~p~nptG~~~~~-~~l~~l~~l~~~----~~~-~li~De~~~ 237 (421)
T 3l8a_A 182 DFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDN-DDLIKIAELCKK----HGV-ILVSDEIHQ 237 (421)
T ss_dssp CHHHHHHHHHHTTEEEEEEESSBTTTTBCCCH-HHHHHHHHHHHH----HTC-EEEEECTTT
T ss_pred CHHHHHHHhhccCCeEEEECCCCCCCCCcCCH-HHHHHHHHHHHH----cCC-EEEEEcccc
Confidence 45778888877788999998888888855322 224444444433 254 456788865
No 168
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=24.48 E-value=1.6e+02 Score=24.97 Aligned_cols=53 Identities=13% Similarity=0.013 Sum_probs=35.4
Q ss_pred HHHHHHHHHHc---CCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 99 ELQLLEIAQRE---ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 99 ~~~L~~li~e~---~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
.+.|.+.+++. ++..|++.-|.++.|..-+. +++.++++ + +++ ++++||-++.
T Consensus 159 ~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~-~~l~~~~~---~----~~~-~li~De~~~~ 214 (398)
T 3a2b_A 159 MEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNL-PELTSIAN---E----FDA-AVMVDDAHSL 214 (398)
T ss_dssp HHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCH-HHHHHHHH---H----HTC-EEEEECTTTT
T ss_pred HHHHHHHHHhhccCCceEEEEeCCCCCCCCccCH-HHHHHHHH---H----cCc-EEEEECCCcc
Confidence 45677777765 68899999999988977653 33333333 2 244 5678988853
No 169
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=24.32 E-value=2.9e+02 Score=22.45 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=42.8
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMG 171 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G 171 (231)
.+..++..+.++..||+.......+ .....+.+.+..+.+.....+.++.+.+-+...|..++.+++.+.+
T Consensus 105 ~~~i~~a~~lG~~~v~~~~G~~~~~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~ 175 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLHIGFVPES-SSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVN 175 (290)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCCT-TSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccc-chHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcC
Confidence 4555666788999999853222222 2222233333333344433346888888877778888888887765
No 170
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=24.27 E-value=1.6e+02 Score=25.15 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHcCCC--EEEEeecCCCCC--CCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 98 LELQLLEIAQREETD--EFIIGLPKSWDG--SETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 98 ~~~~L~~li~e~~i~--~IVVGLPl~~dG--t~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
+...+.+++++++++ .|||=.=-.+.. ........+..+.+.|+....+++++|+++.+-
T Consensus 167 i~~~i~~l~~~~~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~lsql 230 (315)
T 3bh0_A 167 IWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQL 230 (315)
T ss_dssp HHHHHHHHHHTSSSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEeec
Confidence 445677777788999 888853322322 112334567777777776555569999999873
No 171
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.21 E-value=1.8e+02 Score=20.02 Aligned_cols=78 Identities=10% Similarity=0.167 Sum_probs=42.0
Q ss_pred cCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-CCCcHHHHH
Q 026881 109 EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ-TKTDAYAAV 187 (231)
Q Consensus 109 ~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK-~~vD~lAA~ 187 (231)
..++.||+.+-+ .+..+ ..+++.|++......+||+++-...+...+.+.+ +.|...-..| -..+.+.++
T Consensus 54 ~~~dlvi~d~~~--~~~~g------~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~ 124 (140)
T 1k68_A 54 SRPDLILLXLNL--PKKDG------REVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSY-DLHVNCYITKSANLSQLFQI 124 (140)
T ss_dssp CCCSEEEECSSC--SSSCH------HHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHH
T ss_pred CCCcEEEEecCC--CcccH------HHHHHHHHcCcccccccEEEEecCCcHHHHHHHH-HhchhheecCCCCHHHHHHH
Confidence 689999998543 23222 3466677654211268898887666655554444 5565433333 223444433
Q ss_pred H--HHHHHHc
Q 026881 188 I--LLERYFS 195 (231)
Q Consensus 188 I--ILq~yLd 195 (231)
+ ++++|+.
T Consensus 125 i~~~~~~~~~ 134 (140)
T 1k68_A 125 VKGIEEFWLS 134 (140)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcc
Confidence 3 3455544
No 172
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=24.07 E-value=1.1e+02 Score=25.87 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.|.+.+++.++..|+|-.|-++.|..-+. ..+++.++..++ +++ ++++||-++
T Consensus 150 d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~-~~l~~l~~~~~~----~~~-~li~De~~~ 205 (390)
T 1d2f_A 150 DMGKLEAVLAKPECKIMLLCSPQNPTGKVWTC-DELEIMADLCER----HGV-RVISDEIHM 205 (390)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSCTTTCCCCCT-THHHHHHHHHHH----TTC-EEEEECTTT
T ss_pred CHHHHHHHhccCCCeEEEEeCCCCCCCcCcCH-HHHHHHHHHHHH----cCC-EEEEEcccc
Confidence 34677777765578888888898888876543 233444443333 354 455787765
No 173
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=24.01 E-value=2e+02 Score=20.57 Aligned_cols=63 Identities=10% Similarity=0.128 Sum_probs=38.8
Q ss_pred HHHHHHHHcC-CCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 101 QLLEIAQREE-TDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 101 ~L~~li~e~~-i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
+..+.+.+.. ++.||+.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+.+...+..
T Consensus 38 ~a~~~l~~~~~~dlvi~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g~~~ 101 (151)
T 3kcn_A 38 EALACIKKSDPFSVIMVDMRM--PGMEG------TEVIQKARLIS--PNSVYLMLTGNQDLTTAMEAVNEGQVF 101 (151)
T ss_dssp HHHHHHHHSCCCSEEEEESCC--SSSCH------HHHHHHHHHHC--SSCEEEEEECGGGHHHHHHHHHHTCCS
T ss_pred HHHHHHHcCCCCCEEEEeCCC--CCCcH------HHHHHHHHhcC--CCcEEEEEECCCCHHHHHHHHHcCCee
Confidence 3444555666 5999999643 33222 34566677654 378999888777766666665543243
No 174
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.96 E-value=2e+02 Score=20.57 Aligned_cols=65 Identities=11% Similarity=0.077 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
....+.+.+..++.||+.+-+. +..+ ..+++.|+...+ .+||+++-...+...+.+.+...|...
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~--~~~g------~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~ 105 (154)
T 2rjn_A 41 LDALEALKGTSVQLVISDMRMP--EMGG------EVFLEQVAKSYP--DIERVVISGYADAQATIDAVNRGKISR 105 (154)
T ss_dssp HHHHHHHTTSCCSEEEEESSCS--SSCH------HHHHHHHHHHCT--TSEEEEEECGGGHHHHHHHHHTTCCSE
T ss_pred HHHHHHHhcCCCCEEEEecCCC--CCCH------HHHHHHHHHhCC--CCcEEEEecCCCHHHHHHHHhccchhe
Confidence 3455566677899999996542 3222 345666766543 789988876666655555554433443
No 175
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=23.33 E-value=2.2e+02 Score=21.40 Aligned_cols=22 Identities=9% Similarity=0.178 Sum_probs=13.0
Q ss_pred HHHHHHHHHcCCCEEEEeecCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKS 121 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~ 121 (231)
.++.+.+...+++.|||-+-.|
T Consensus 52 ~~~~~~~~~~~pd~Vii~~G~N 73 (190)
T 1ivn_A 52 ARLPALLKQHQPRWVLVELGGN 73 (190)
T ss_dssp HHHHHHHHHHCCSEEEEECCTT
T ss_pred HHHHHHHHhcCCCEEEEEeecc
Confidence 4555555556677777765444
No 176
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=23.29 E-value=1.8e+02 Score=25.25 Aligned_cols=56 Identities=16% Similarity=0.161 Sum_probs=36.1
Q ss_pred HHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 99 ELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 99 ~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
.+.|.+.+++. ++..|++-.|-++.|..-+.. .+++.++..++ +++ ++++||-++.
T Consensus 175 ~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~-~l~~l~~~~~~----~~~-~li~Dea~~~ 235 (435)
T 3piu_A 175 ETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRN-ELYLLLSFVED----KGI-HLISDEIYSG 235 (435)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHH-HHHHHHHHHHH----HTC-EEEEECTTGG
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHH-HHHHHHHHHHH----cCC-EEEEeccccc
Confidence 46777777653 677899999998888765432 34444443433 244 5668988653
No 177
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=23.27 E-value=1.8e+02 Score=24.79 Aligned_cols=57 Identities=19% Similarity=0.124 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCCEE-EEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 98 LELQLLEIAQREETDEF-IIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~I-VVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
..+.|.+.+++.++..| |+-.|-++.|..-+. ...++.++..++ +++. +++||-++.
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~-~~l~~l~~~~~~----~~~~-li~De~~~~ 207 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPL-PARKRLLQMVME----RGLV-VVEDDAYRE 207 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCH-HHHHHHHHHHHH----HTCC-EEEECTTTT
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCH-HHHHHHHHHHHH----cCCE-EEEeCCccc
Confidence 34677877776678876 568888888876543 334444444433 2554 567887764
No 178
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.10 E-value=1.9e+02 Score=20.03 Aligned_cols=63 Identities=10% Similarity=0.074 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
...+.+.+..++.||+.+-+. ++..+ ..+++.|+.. + .+||+++-...+...+.+.+ +.|...
T Consensus 45 ~a~~~~~~~~~dlii~d~~~~-~~~~g------~~~~~~l~~~-~--~~~ii~ls~~~~~~~~~~~~-~~g~~~ 107 (140)
T 3cg0_A 45 EAVRCAPDLRPDIALVDIMLC-GALDG------VETAARLAAG-C--NLPIIFITSSQDVETFQRAK-RVNPFG 107 (140)
T ss_dssp HHHHHHHHHCCSEEEEESSCC-SSSCH------HHHHHHHHHH-S--CCCEEEEECCCCHHHHHHHH-TTCCSE
T ss_pred HHHHHHHhCCCCEEEEecCCC-CCCCH------HHHHHHHHhC-C--CCCEEEEecCCCHHHHHHHH-hcCCCE
Confidence 344555667899999996442 02222 3456666654 3 78998887766655544443 556543
No 179
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=22.91 E-value=1.5e+02 Score=27.41 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=18.0
Q ss_pred CceEEEEecCCCeEEEEEec
Q 026881 62 GGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD 81 (231)
+..+||||.|+..+=+++.|
T Consensus 4 m~~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALAD 23 (511)
T ss_dssp CCEEEEEEECSSEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEEC
Confidence 35799999999999999998
No 180
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=22.39 E-value=1.7e+02 Score=27.12 Aligned_cols=19 Identities=26% Similarity=0.461 Sum_probs=17.5
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..+=+++.|
T Consensus 26 ~~~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred CeEEEEEeCCcceEEEEEC
Confidence 4699999999999999998
No 181
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=22.36 E-value=1.7e+02 Score=24.16 Aligned_cols=52 Identities=10% Similarity=0.110 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.....|.+.++++++|.||+|- .|..+-.....-..++++-.. ..+||..+-
T Consensus 253 ~~~~~I~~~a~~~~~dLiV~G~----~g~~~~~~~~~Gsv~~~vl~~---~~~pVLvv~ 304 (319)
T 3olq_A 253 LPEQVIPQVCEELNAGIVVLGI----LGRTGLSAAFLGNTAEQLIDH---IKCDLLAIK 304 (319)
T ss_dssp CHHHHHHHHHHHTTEEEEEEEC----CSCCSTHHHHHHHHHHHHHTT---CCSEEEEEC
T ss_pred CcHHHHHHHHHHhCCCEEEEec----cCccCCccccccHHHHHHHhh---CCCCEEEEC
Confidence 3457788888899999999992 233332222333445555543 478888874
No 182
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=22.27 E-value=1.9e+02 Score=21.22 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=37.6
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
.+.+++.+.+++.||+| . .++. ..+.|... ++.|+... ..|-.+|-+.|.+..+
T Consensus 56 ~~~~~l~~~gv~~vi~~-----~--iG~~------a~~~L~~~----GI~v~~~~-~~~i~eal~~~~~g~L 109 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIAS-----S--PGPN------AFEVLNEL----GIKIYRAT-GTSVEENLKLFTEGNL 109 (124)
T ss_dssp THHHHHHHTTCCEEEEC-----C--SSHH------HHHHHHHH----TCEEEECC-SCCHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEC-----C--cCHH------HHHHHHHC----CCEEEEcC-CCCHHHHHHHHHhCCC
Confidence 56677778999999999 2 3432 23456654 88988874 4788888888776443
No 183
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=22.20 E-value=1.3e+02 Score=21.30 Aligned_cols=84 Identities=17% Similarity=0.153 Sum_probs=47.6
Q ss_pred HHHHHHHH-cCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCC
Q 026881 101 QLLEIAQR-EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179 (231)
Q Consensus 101 ~L~~li~e-~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~ 179 (231)
.+..+.+. ..++.||+.+-+ .+. ....+++.|++.. ..+||+++-...+...+.+.+ +.|...-..|
T Consensus 57 ~~~~~~~~~~~~dlvi~D~~l--~~~------~g~~~~~~l~~~~--~~~~ii~lt~~~~~~~~~~~~-~~ga~~~l~K- 124 (146)
T 4dad_A 57 QIVQRTDGLDAFDILMIDGAA--LDT------AELAAIEKLSRLH--PGLTCLLVTTDASSQTLLDAM-RAGVRDVLRW- 124 (146)
T ss_dssp HHTTCHHHHTTCSEEEEECTT--CCH------HHHHHHHHHHHHC--TTCEEEEEESCCCHHHHHHHH-TTTEEEEEES-
T ss_pred HHHHHHhcCCCCCEEEEeCCC--CCc------cHHHHHHHHHHhC--CCCcEEEEeCCCCHHHHHHHH-HhCCceeEcC-
Confidence 45555556 899999999543 221 1245677777664 378999887776666555544 4454322223
Q ss_pred CCcHHHHHHHHHHHHcc
Q 026881 180 KTDAYAAVILLERYFSM 196 (231)
Q Consensus 180 ~vD~lAA~IILq~yLd~ 196 (231)
.++.-.=.-.++..+..
T Consensus 125 p~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 125 PLEPRALDDALKRAAAQ 141 (146)
T ss_dssp SCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhh
Confidence 33333333334555543
No 184
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=22.13 E-value=2.5e+02 Score=23.42 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccC--CCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAER--GWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~--~lpV~lvDER~T 159 (231)
..+.|.+.+.+.++..|+|-.|-+..|..-+.. .+++. .+...++ ++ ++++||-++
T Consensus 145 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~-~l~~i----~~~~~~~~~~~-~li~De~~~ 202 (367)
T 3euc_A 145 DRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAA-DMEAI----VRAAQGSVCRS-LVVVDEAYQ 202 (367)
T ss_dssp CHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH-HHHHH----HHHTBTTSCBC-EEEEECTTC
T ss_pred CHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHH-HHHHH----HHhhhhcCCCc-EEEEeCcch
Confidence 356788888877899999988988888765432 23333 3333334 44 456799876
No 185
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=21.81 E-value=1.5e+02 Score=27.25 Aligned_cols=19 Identities=11% Similarity=0.345 Sum_probs=17.4
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..+=+++.|
T Consensus 5 ~~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEcCCCceEEEEEC
Confidence 4799999999999999988
No 186
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=21.57 E-value=1e+02 Score=26.22 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=28.8
Q ss_pred HHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEE
Q 026881 106 AQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYL 153 (231)
Q Consensus 106 i~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~l 153 (231)
+.+.+.|.|.|| |+.+-....+.+..+++++ +++|+++
T Consensus 27 ~~~~GtD~i~vG------Gs~gvt~~~~~~~v~~ik~----~~~Pvvl 64 (228)
T 3vzx_A 27 LCESGTDAVIIG------GSDGVTEDNVLRMMSKVRR----FLVPCVL 64 (228)
T ss_dssp HHTSSCSEEEEC------CCSCCCHHHHHHHHHHHTT----SSSCEEE
T ss_pred HHHcCCCEEEEC------CcCCCCHHHHHHHHHHhhc----cCCCEEE
Confidence 357889999999 6666556778888888875 3788776
No 187
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=21.49 E-value=1.4e+02 Score=25.42 Aligned_cols=55 Identities=9% Similarity=0.123 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
.+.|.+.+++.++..|++-.|-++.|..-+. ..+++.++..++ +++ ++++||-++
T Consensus 153 ~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~-~~l~~i~~~~~~----~~~-~li~De~~~ 207 (399)
T 1c7n_A 153 FQKLEKLSKDKNNKALLFCSPHNPVGRVWKK-DELQKIKDIVLK----SDL-MLWSDEIHF 207 (399)
T ss_dssp HHHHHHHHTCTTEEEEEEESSBTTTTBCCCH-HHHHHHHHHHHH----SSC-EEEEECTTT
T ss_pred HHHHHHHhccCCCcEEEEcCCCCCCCcCcCH-HHHHHHHHHHHH----cCC-EEEEEcccc
Confidence 4677777765678888888888888876542 344555544433 355 456788765
No 188
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=21.35 E-value=1.2e+02 Score=26.53 Aligned_cols=53 Identities=19% Similarity=0.119 Sum_probs=35.4
Q ss_pred HHHHHHHHHHc---CCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 99 ELQLLEIAQRE---ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 99 ~~~L~~li~e~---~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
.+.|++.+++. ++..|++--|.++.|..-+. +.+.++ .++ +++ ++++||-++.
T Consensus 180 ~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l-~~l~~l---~~~----~g~-~li~Dea~~~ 235 (427)
T 2w8t_A 180 VEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPL-KEMVAV---AKK----HGA-MVLVDEAHSM 235 (427)
T ss_dssp HHHHHHHHHTSCSSSCEEEEEESEETTTTEECCH-HHHHHH---HHH----TTC-EEEEECTTTT
T ss_pred HHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCH-HHHHHH---HHH----cCC-EEEEECCccc
Confidence 45677777764 67889999888999987662 333322 222 354 5678998775
No 189
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=21.11 E-value=1.9e+02 Score=24.90 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=36.4
Q ss_pred HHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 99 ELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 99 ~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
.+.|.+.+++. ++..|++-.|-++.|..-+. ..++++++..++ +++ ++++||-++-
T Consensus 172 ~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~-~~l~~l~~~~~~----~~~-~li~Dea~~~ 232 (428)
T 1iay_A 172 SKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDK-DTLKSVLSFTNQ----HNI-HLVCDEIYAA 232 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCH-HHHHHHHHHHHT----TTC-EEEEECTTGG
T ss_pred HHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCH-HHHHHHHHHHHH----CCe-EEEEeccccc
Confidence 46677777652 57788999999888887543 344555554332 354 4678998764
No 190
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=21.10 E-value=2.9e+02 Score=21.38 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=40.1
Q ss_pred cCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhc--cCCCcEEEecCCC-cHHHHHHHHHHcCCCccccCCCCcHHH
Q 026881 109 EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAA--ERGWRVYLLDEHR-TSAEAVDRMINMGLSKSARQTKTDAYA 185 (231)
Q Consensus 109 ~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~--~~~lpV~lvDER~-TT~eA~~~l~e~G~~rkkrK~~vD~lA 185 (231)
..++.||+-+ .|.|..+ ..+++.|++... ...+||+++-... +...+.+ ..+.|...-..| .++.+.
T Consensus 118 ~~~dlillD~--~lp~~~G------~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~-~~~~Ga~~~l~K-P~~~L~ 187 (206)
T 3mm4_A 118 LPFDYIFMDC--QMPEMDG------YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARE-TIQAGMDAFLDK-SLNQLA 187 (206)
T ss_dssp CSCSEEEEES--CCSSSCH------HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHH-HHHHTCSEEEET-TCTTHH
T ss_pred CCCCEEEEcC--CCCCCCH------HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHH-HHhCCCCEEEcC-cHHHHH
Confidence 3899999985 3334333 345555654310 1378999887765 4444443 345565443334 566444
Q ss_pred HHHHHHHHHc
Q 026881 186 AVILLERYFS 195 (231)
Q Consensus 186 A~IILq~yLd 195 (231)
++ ++++++
T Consensus 188 ~~--i~~~l~ 195 (206)
T 3mm4_A 188 NV--IREIES 195 (206)
T ss_dssp HH--HHHHC-
T ss_pred HH--HHHHHh
Confidence 43 344444
No 191
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=21.02 E-value=3.5e+02 Score=25.15 Aligned_cols=92 Identities=12% Similarity=0.160 Sum_probs=55.8
Q ss_pred ceEEEEecCCCeEEEEEecCc--eeeeeee----eec-c--------chh-------HHHHHHHHHHHcCCCEEE-Eeec
Q 026881 63 GFSLGVDLGLSRTGLALSKGF--CVRPLTV----LKL-R--------GEK-------LELQLLEIAQREETDEFI-IGLP 119 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~--~A~Pl~~----i~~-~--------~~~-------~~~~L~~li~e~~i~~IV-VGLP 119 (231)
.++-+||.|+--|=+.|.+.. ...++.. +.. . +.+ ......++++.++++.|. |+
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~~v~~vA-- 92 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQKLYVLA-- 92 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE--
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe--
Confidence 578999999999999998832 1122221 111 0 011 123556677889998664 55
Q ss_pred CCCCCCCC-hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 120 KSWDGSET-PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 120 l~~dGt~s-~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
|.. ..+.-...|.+++++.+ |++|..++- ..||+-.|
T Consensus 93 -----TsA~R~A~N~~~fl~~i~~~t---G~~ievIsG---~EEA~l~~ 130 (508)
T 3hi0_A 93 -----TAAAREAENGPDFIREAEAIL---GCEIEVLSG---EKEALYSA 130 (508)
T ss_dssp -----CTHHHHSTTHHHHHHHHHHHH---TSCEEECCH---HHHHHHHH
T ss_pred -----eHHHHcCcCHHHHHHHHHHHH---CCCeEEecH---HHHHHHHH
Confidence 221 12333578999998774 899998872 24554444
No 192
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=20.97 E-value=2.1e+02 Score=19.73 Aligned_cols=82 Identities=11% Similarity=0.131 Sum_probs=42.2
Q ss_pred HHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCC
Q 026881 102 LLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181 (231)
Q Consensus 102 L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~v 181 (231)
..+.+....++.|++.+-+ .+..+ ..+++.|++.. ..+||+++-...+...+.+.+ +.|...-..| ++
T Consensus 39 a~~~~~~~~~dlvl~D~~l--~~~~g------~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~K-P~ 106 (136)
T 1mvo_A 39 ALKKAETEKPDLIVLDVML--PKLDG------IEVCKQLRQQK--LMFPILMLTAKDEEFDKVLGL-ELGADDYMTK-PF 106 (136)
T ss_dssp HHHHHHHHCCSEEEEESSC--SSSCH------HHHHHHHHHTT--CCCCEEEEECTTCCCCHHHHH-HTTCCEEEES-SC
T ss_pred HHHHHhhcCCCEEEEecCC--CCCCH------HHHHHHHHcCC--CCCCEEEEECCCCHHHHHHHH-hCCCCEEEEC-CC
Confidence 3345566789999999644 23222 34566776653 368888775443333333333 4555433333 33
Q ss_pred cHHHHHHHHHHHHc
Q 026881 182 DAYAAVILLERYFS 195 (231)
Q Consensus 182 D~lAA~IILq~yLd 195 (231)
+.-.-.-.++..+.
T Consensus 107 ~~~~l~~~i~~~~~ 120 (136)
T 1mvo_A 107 SPREVNARVKAILR 120 (136)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 33333333444444
No 193
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=20.75 E-value=2.2e+02 Score=19.75 Aligned_cols=84 Identities=12% Similarity=0.136 Sum_probs=46.7
Q ss_pred HHHHHHcC-CCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCC
Q 026881 103 LEIAQREE-TDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181 (231)
Q Consensus 103 ~~li~e~~-i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~v 181 (231)
...+.+.. ++.||+.+-+ .+..+ ..+++.|++.. ...+||+++-...+...+.+.+ +.|...-..| .+
T Consensus 44 ~~~~~~~~~~dlvi~D~~l--~~~~g------~~~~~~l~~~~-~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~K-P~ 112 (136)
T 3hdv_A 44 RLYLHYQKRIGLMITDLRM--QPESG------LDLIRTIRASE-RAALSIIVVSGDTDVEEAVDVM-HLGVVDFLLK-PV 112 (136)
T ss_dssp HHHHHHCTTEEEEEECSCC--SSSCH------HHHHHHHHTST-TTTCEEEEEESSCCHHHHHHHH-HTTCSEEEES-SC
T ss_pred HHHHHhCCCCcEEEEeccC--CCCCH------HHHHHHHHhcC-CCCCCEEEEeCCCChHHHHHHH-hCCcceEEeC-CC
Confidence 33444455 9999998644 23322 45667776541 1378998887776665555444 5565433333 45
Q ss_pred cHHHHHHHHHHHHccc
Q 026881 182 DAYAAVILLERYFSMS 197 (231)
Q Consensus 182 D~lAA~IILq~yLd~~ 197 (231)
+.-.=.-.+++++...
T Consensus 113 ~~~~l~~~i~~~~~~~ 128 (136)
T 3hdv_A 113 DLGKLLELVNKELKIG 128 (136)
T ss_dssp CHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHhcCc
Confidence 5444444556666543
No 194
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=20.73 E-value=1.9e+02 Score=26.90 Aligned_cols=20 Identities=20% Similarity=0.441 Sum_probs=17.9
Q ss_pred CceEEEEecCCCeEEEEEec
Q 026881 62 GGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD 81 (231)
+..+||||+|+..+=+++.|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEEC
Confidence 35799999999999999988
No 195
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=20.58 E-value=2.7e+02 Score=22.35 Aligned_cols=82 Identities=11% Similarity=0.116 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc--------------HHHHHH
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT--------------SAEAVD 165 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T--------------T~eA~~ 165 (231)
..+.+.+...++++||+- |... .. .+.+.+.+ .++||+++|.... ...|-+
T Consensus 54 ~~~~~~l~~~~vdgiIi~-~~~~---~~-------~~~~~~~~----~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~ 118 (291)
T 3egc_A 54 REAVGQFFERRVDGLILA-PSEG---EH-------DYLRTELP----KTFPIVAVNRELRIPGCGAVLSENVRGARTAVE 118 (291)
T ss_dssp HHHHHHHHHTTCSEEEEC-CCSS---CC-------HHHHHSSC----TTSCEEEESSCCCCTTCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEe-CCCC---Ch-------HHHHHhhc----cCCCEEEEecccCCCCCCEEEECcHHHHHHHHH
Confidence 345555567899999985 2221 11 12233332 3788887775443 344555
Q ss_pred HHHHcCCCccc-cCCCCcHHHHHHHHHHHHcc
Q 026881 166 RMINMGLSKSA-RQTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 166 ~l~e~G~~rkk-rK~~vD~lAA~IILq~yLd~ 196 (231)
.|.+.|.++-. --...+...+..-++.|.+.
T Consensus 119 ~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~ 150 (291)
T 3egc_A 119 YLIARGHTRIGAIVGSAGLMTSRERLKGFRAA 150 (291)
T ss_dssp HHHHTTCCSEEEECSCTTSHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeCCCCCcCHHHHHHHHHHH
Confidence 56665533210 01223334444555555554
No 196
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=20.57 E-value=2.9e+02 Score=23.15 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=35.8
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
.+.|.+.+.+.++..|++-.|-++.|..-+. ..+ .+|.+. .+ -++++||-++-
T Consensus 153 ~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~-~~l----~~l~~~---~~-~~li~De~~~~ 205 (369)
T 3cq5_A 153 MDVALEEIRAKQPDIVFVTTPNNPTGDVTSL-DDV----ERIINV---AP-GIVIVDEAYAE 205 (369)
T ss_dssp HHHHHHHHHHHCCSEEEEESSCTTTCCCCCH-HHH----HHHHHH---CS-SEEEEECTTGG
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCCCCCH-HHH----HHHHHh---CC-CEEEEECCchh
Confidence 4677777776688999998888888887653 222 233333 24 36788998863
No 197
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=20.37 E-value=2.3e+02 Score=22.50 Aligned_cols=19 Identities=11% Similarity=0.176 Sum_probs=13.4
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 026881 99 ELQLLEIAQREETDEFIIG 117 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVG 117 (231)
+.++.+.+.+.++|.||+.
T Consensus 21 ~~~~l~~~~~~~~D~vi~~ 39 (260)
T 2yvt_A 21 LPKLKGVIAEKQPDILVVV 39 (260)
T ss_dssp HHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 3455566666799988877
No 198
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=20.27 E-value=2.6e+02 Score=22.33 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=25.6
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCC
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHR 158 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~ 158 (231)
..+.+.+...++++||+- |.. . ....+.+.+ .++||+++|...
T Consensus 53 ~~~~~~l~~~~vdgiIi~-~~~-----~------~~~~~~l~~----~~iPvV~i~~~~ 95 (276)
T 3jy6_A 53 KTLLRAIGSRGFDGLILQ-SFS-----N------PQTVQEILH----QQMPVVSVDREM 95 (276)
T ss_dssp HHHHHHHHTTTCSEEEEE-SSC-----C------HHHHHHHHT----TSSCEEEESCCC
T ss_pred HHHHHHHHhCCCCEEEEe-cCC-----c------HHHHHHHHH----CCCCEEEEeccc
Confidence 345555557899999987 211 1 123344543 378888887543
No 199
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.20 E-value=2.3e+02 Score=19.74 Aligned_cols=79 Identities=9% Similarity=0.183 Sum_probs=42.9
Q ss_pred cCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-CCCcHHHHH
Q 026881 109 EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ-TKTDAYAAV 187 (231)
Q Consensus 109 ~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK-~~vD~lAA~ 187 (231)
..++.||+.+-+ .+..+ ..+++.|++......+||+++-...+...+.+.+ +.|...-..| -..+.+.++
T Consensus 61 ~~~dlvi~D~~l--~~~~g------~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~ 131 (149)
T 1k66_A 61 PRPAVILLDLNL--PGTDG------REVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICY-SYSISSYIVKPLEIDRLTET 131 (149)
T ss_dssp CCCSEEEECSCC--SSSCH------HHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHH
T ss_pred CCCcEEEEECCC--CCCCH------HHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHH-HCCCCEEEeCCCCHHHHHHH
Confidence 789999998543 33222 3456666654211268888887666655555444 5565433333 233444443
Q ss_pred H--HHHHHHcc
Q 026881 188 I--LLERYFSM 196 (231)
Q Consensus 188 I--ILq~yLd~ 196 (231)
+ +++.|+..
T Consensus 132 i~~~~~~~~~~ 142 (149)
T 1k66_A 132 VQTFIKYWLDI 142 (149)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHhhhh
Confidence 3 45666543
No 200
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.07 E-value=2.5e+02 Score=22.53 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=29.7
Q ss_pred HHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHc
Q 026881 107 QREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINM 170 (231)
Q Consensus 107 ~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~ 170 (231)
...++|.||.. ..... .+..++|++ .++|++.+++..|.....+.+...
T Consensus 56 ~~l~PDlIi~~-----~~~~~------~~~~~~L~~----~gipvv~~~~~~~~~~~~~~i~~l 104 (255)
T 3md9_A 56 LAMKPTMLLVS-----ELAQP------SLVLTQIAS----SGVNVVTVPGQTTPESVAMKINAV 104 (255)
T ss_dssp HTTCCSEEEEE-----TTCSC------HHHHHHHHH----TTCEEEEECCCCSHHHHHHHHHHH
T ss_pred HccCCCEEEEc-----CCcCc------hhHHHHHHH----cCCcEEEeCCCCCHHHHHHHHHHH
Confidence 34799988876 22221 123456664 379999998755555555555543
Done!