Query 026881
Match_columns 231
No_of_seqs 170 out of 1146
Neff 5.1
Searched_HMMs 13730
Date Tue Mar 26 00:31:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026881.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026881hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nu0a_ c.55.3.8 (A:) Hypothet 100.0 2E-41 1.5E-45 274.2 10.3 132 62-196 2-136 (138)
2 d1vhxa_ c.55.3.8 (A:) Hypothet 100.0 5E-41 3.6E-45 272.5 12.2 133 63-198 2-139 (140)
3 d1iv0a_ c.55.3.8 (A:) Hypothet 100.0 6.7E-31 4.8E-35 201.4 10.0 95 63-161 1-98 (98)
4 d3bzka5 c.55.3.13 (A:325-473) 98.8 2.9E-08 2.1E-12 79.6 12.0 93 61-161 3-102 (149)
5 d1hjra_ c.55.3.6 (A:) RuvC res 97.6 0.00039 2.8E-08 55.0 11.9 96 64-166 2-109 (158)
6 d1xc3a1 c.55.1.10 (A:1-118) Pu 96.3 0.01 7.3E-07 43.1 8.5 97 64-165 1-112 (118)
7 d2ap1a2 c.55.1.10 (A:1-117) Pu 95.7 0.026 1.9E-06 40.3 8.3 93 64-161 1-110 (117)
8 d2aa4a1 c.55.1.10 (A:1-119) N- 95.4 0.022 1.6E-06 41.2 6.9 93 63-160 1-109 (119)
9 d2gupa1 c.55.1.10 (A:1-114) Hy 94.6 0.04 2.9E-06 39.8 6.5 57 63-120 1-61 (114)
10 d1z6ra2 c.55.1.10 (A:82-210) M 94.6 0.028 2.1E-06 40.7 5.7 102 63-167 4-125 (129)
11 d1z05a3 c.55.1.10 (A:81-208) T 94.3 0.028 2E-06 40.6 4.9 100 63-166 4-123 (128)
12 d2hoea3 c.55.1.10 (A:72-199) N 93.6 0.11 8.1E-06 37.3 7.3 101 63-167 4-125 (128)
13 d1okja1 c.55.1.9 (A:1-106) Hyp 90.7 1.2 8.6E-05 31.7 9.8 85 64-155 1-92 (106)
14 d1woqa1 c.55.1.10 (A:11-139) I 90.2 0.27 1.9E-05 35.1 5.8 99 63-165 2-122 (129)
15 d1sz2a1 c.55.1.7 (A:3-321) Glu 87.9 0.79 5.8E-05 36.8 7.8 60 64-123 2-66 (319)
16 d1bupa1 c.55.1.1 (A:4-188) Hea 86.6 0.15 1.1E-05 39.4 2.4 20 63-82 1-20 (185)
17 d1q18a1 c.55.1.7 (A:2-111) Glu 83.1 3.9 0.00029 28.0 8.7 64 63-126 2-70 (110)
18 d1dkgd1 c.55.1.1 (D:3-185) Hea 82.9 0.25 1.8E-05 38.1 2.0 19 64-82 1-19 (183)
19 d2a6aa1 c.55.1.9 (A:1-103) Hyp 82.0 6.2 0.00045 27.4 11.0 84 63-155 1-92 (103)
20 d1huxa_ c.55.1.5 (A:) Hydroxyg 77.0 2.4 0.00018 32.2 6.2 48 63-110 2-52 (259)
21 d2ch5a2 c.55.1.5 (A:1-117) N-a 70.0 15 0.0011 25.7 9.5 87 63-155 3-106 (117)
22 d1zc6a1 c.55.1.5 (A:8-121) Pro 68.0 4.5 0.00033 27.8 5.3 21 61-81 2-22 (114)
23 d1twda_ c.1.30.1 (A:) Copper h 67.4 8.3 0.00061 31.6 7.7 62 104-174 79-143 (247)
24 d1uf3a_ d.159.1.6 (A:) Hypothe 67.1 5.9 0.00043 29.0 6.2 51 97-154 19-69 (228)
25 d2f9wa2 c.55.1.13 (A:1-114) Ty 64.7 12 0.00086 25.6 7.1 20 64-83 1-20 (114)
26 d1tq8a_ c.26.2.4 (A:) Hypothet 64.3 6.7 0.00049 27.3 5.8 52 97-155 94-145 (147)
27 d1t6ca1 c.55.1.8 (A:7-132) Exo 56.3 30 0.0022 24.6 8.4 85 62-156 2-110 (126)
28 d1jcea1 c.55.1.1 (A:4-140) Pro 55.8 3.2 0.00023 29.7 2.6 19 64-82 1-19 (137)
29 d1wb9a3 c.55.6.1 (A:117-269) D 55.6 32 0.0023 24.6 11.7 115 62-199 14-133 (153)
30 d2ewsa1 c.55.1.14 (A:1-267) Ty 54.7 18 0.0013 26.9 7.1 52 65-120 2-53 (267)
31 d3bexa1 c.55.1.13 (A:1-118) Ty 54.5 28 0.002 23.6 8.1 19 64-82 1-19 (118)
32 d1mjha_ c.26.2.4 (A:) "Hypothe 54.4 8.9 0.00065 27.1 5.0 56 97-159 105-160 (160)
33 d2z3va1 c.26.2.4 (A:2-136) Hyp 51.9 7 0.00051 26.9 3.9 23 97-119 85-107 (135)
34 d2yvta1 d.159.1.6 (A:4-260) Un 51.8 19 0.0014 26.4 6.7 21 97-117 16-36 (257)
35 d1krwa_ c.23.1.1 (A:) NTRC rec 46.5 35 0.0026 23.4 7.2 61 101-172 38-98 (123)
36 d1jmva_ c.26.2.4 (A:) Universa 41.8 29 0.0021 23.4 6.0 48 97-154 89-136 (140)
37 d1kcfa2 c.55.3.7 (A:39-256) Mi 41.2 6.7 0.00049 30.6 2.5 63 63-125 2-87 (218)
38 d1gsoa2 c.30.1.1 (A:-2-103) Gl 40.9 19 0.0014 25.4 4.9 42 97-152 53-94 (105)
39 d1qgoa_ c.92.1.2 (A:) Cobalt c 37.8 48 0.0035 25.6 7.5 55 113-174 4-75 (257)
40 d1jbea_ c.23.1.1 (A:) CheY pro 35.8 61 0.0045 22.2 9.6 68 102-178 41-108 (128)
41 d1toaa_ c.92.2.2 (A:) Periplas 35.6 35 0.0025 26.7 6.2 47 122-172 188-234 (277)
42 d2gm3a1 c.26.2.4 (A:5-175) Put 35.5 29 0.0021 24.8 5.3 51 97-155 107-158 (171)
43 d1yoba1 c.23.5.1 (A:1-179) Fla 34.5 16 0.0011 27.9 3.7 47 98-144 109-175 (179)
44 d1psza_ c.92.2.2 (A:) Pneumoco 33.0 41 0.003 26.4 6.3 46 124-173 204-249 (286)
45 d1u6za2 c.55.1.8 (A:12-135) Ex 31.8 40 0.0029 23.8 5.5 81 65-155 2-106 (124)
46 d2nu7b1 c.23.4.1 (B:239-388) S 31.5 94 0.0068 23.0 8.6 70 98-173 60-129 (150)
47 d1q77a_ c.26.2.4 (A:) Hypothet 31.0 12 0.00089 25.4 2.3 22 96-117 95-116 (138)
48 d2e7ya1 d.157.1.7 (A:1-280) Ri 30.9 71 0.0052 23.7 7.2 51 99-157 225-275 (280)
49 d1cr2a_ c.37.1.11 (A:) Gene 4 30.6 42 0.0031 25.6 5.8 59 98-156 135-195 (277)
50 d1ny5a1 c.23.1.1 (A:1-137) Tra 30.5 80 0.0058 21.8 7.0 66 102-178 36-101 (137)
51 d2fcra_ c.23.5.1 (A:) Flavodox 30.4 31 0.0022 25.8 4.8 30 115-144 142-171 (173)
52 d1wl8a1 c.23.16.1 (A:1-188) GM 29.9 5.2 0.00038 29.8 0.0 13 63-75 1-13 (188)
53 d1qkka_ c.23.1.1 (A:) Transcri 29.9 65 0.0047 22.5 6.4 76 101-187 35-111 (140)
54 d1eucb1 c.23.4.1 (B:246-393) S 29.2 94 0.0069 23.0 7.4 70 98-173 60-129 (148)
55 d1a9xb2 c.23.16.1 (B:1653-1880 29.0 12 0.00091 29.5 2.3 46 63-117 40-87 (228)
56 d2p3ra1 c.55.1.4 (A:2-253) Gly 28.5 20 0.0014 27.9 3.4 19 63-81 3-21 (252)
57 d1xvla1 c.92.2.2 (A:49-327) Mn 27.9 42 0.003 26.4 5.4 45 124-172 194-238 (279)
58 d1ii7a_ d.159.1.4 (A:) Mre11 { 27.0 83 0.006 23.6 7.0 53 99-154 29-81 (333)
59 d1oboa_ c.23.5.1 (A:) Flavodox 26.4 19 0.0014 26.6 2.8 31 114-144 137-167 (169)
60 d1czna_ c.23.5.1 (A:) Flavodox 26.0 19 0.0014 26.9 2.7 31 114-144 137-167 (169)
61 d1pq4a_ c.92.2.2 (A:) Periplas 25.9 40 0.0029 26.7 5.0 46 123-173 217-262 (289)
62 d1ccwa_ c.23.6.1 (A:) Glutamat 25.7 1.1E+02 0.0078 21.8 7.9 96 86-188 30-130 (137)
63 d1xxxa1 c.1.10.1 (A:5-300) Dih 25.5 77 0.0056 24.8 6.7 53 98-157 90-142 (296)
64 d1dlja2 c.2.1.6 (A:1-196) UDP- 25.3 50 0.0036 24.1 5.2 43 109-154 153-195 (196)
65 d1zbsa2 c.55.1.5 (A:1-107) Hyp 24.4 95 0.007 20.8 9.4 74 64-145 1-87 (107)
66 d1dxea_ c.1.12.5 (A:) 2-dehydr 24.2 46 0.0034 26.4 5.0 74 92-173 148-229 (253)
67 d1ewqa3 c.55.6.1 (A:121-266) D 22.7 1.2E+02 0.0084 21.1 6.8 50 62-117 11-61 (146)
68 d2a9pa1 c.23.1.1 (A:2-118) DNA 22.3 1.1E+02 0.0077 20.5 8.2 75 101-187 35-110 (117)
69 d1d2fa_ c.67.1.3 (A:) Modulato 22.1 62 0.0045 25.5 5.5 56 98-159 121-176 (361)
70 d1e4ft1 c.55.1.1 (T:7-199) Cel 22.1 1.4E+02 0.0099 21.7 7.4 18 64-81 3-20 (193)
71 d1peya_ c.23.1.1 (A:) Sporulat 21.3 1.1E+02 0.0082 20.5 10.3 80 103-194 38-117 (119)
72 d2q4qa1 c.103.1.1 (A:2-122) Hy 21.1 1.1E+02 0.0083 21.5 6.3 52 100-168 51-104 (121)
73 d1zh2a1 c.23.1.1 (A:2-120) Tra 21.0 1.1E+02 0.0083 20.4 7.3 59 103-173 37-95 (119)
74 d1eo1a_ c.55.5.1 (A:) Hypothet 20.6 94 0.0068 21.1 5.6 54 101-172 56-109 (124)
75 d1o5ka_ c.1.10.1 (A:) Dihydrod 20.6 1.4E+02 0.0099 23.0 7.3 65 98-169 84-154 (295)
76 d1w25a1 c.23.1.1 (A:2-140) Res 20.4 1.3E+02 0.0092 20.7 8.3 63 103-174 38-100 (139)
77 d2hmva1 c.2.1.9 (A:7-140) Ktn 20.1 21 0.0015 24.5 1.8 30 113-157 3-32 (134)
No 1
>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2e-41 Score=274.23 Aligned_cols=132 Identities=30% Similarity=0.436 Sum_probs=117.2
Q ss_pred CceEEEEecCCCeEEEEEecC--ceeeeeeeeeccch-hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHH
Q 026881 62 GGFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRGE-KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAG 138 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~~-~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~ 138 (231)
.|++||||||+||||||+||. .+|+|+.++.+.+. .++..|.+++.+|+|+.||||+|++|+|+.+++++.+++|++
T Consensus 2 ~griLgiD~G~kriGvAvsd~~~~~a~pl~~i~~~~~~~~~~~l~~i~~e~~~~~iVvG~P~~~~g~~~~~~~~v~~f~~ 81 (138)
T d1nu0a_ 2 SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFAN 81 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCEEEEEEeCCCCCccccceeeecccchhhHHHHHHHhhccCccEEEeecccccccchHHHHHHHHHHHH
Confidence 389999999999999999995 48999999987543 478999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCCcHHHHHHHHHHHHcc
Q 026881 139 RLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTDAYAAVILLERYFSM 196 (231)
Q Consensus 139 ~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~vD~lAA~IILq~yLd~ 196 (231)
.|++.+ ++||++||||+||.+|++.|++.|.+++++|+.+|++||++|||+||++
T Consensus 82 ~L~~~~---~i~V~~~DEr~TS~eA~~~l~~~~~~~~~~k~~iD~~AA~lILq~~L~~ 136 (138)
T d1nu0a_ 82 RIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYMEQ 136 (138)
T ss_dssp HHHHHH---CCCEEEEEEECCCCCC-------CCCCCCCHHHHTTHHHHHHHHHHHHT
T ss_pred HHhhcc---CCCeEEEeccccHHHHHHHHHHccccccccccchhHHHHHHHHHHHHHc
Confidence 999875 8999999999999999999999999999999999999999999999986
No 2
>d1vhxa_ c.55.3.8 (A:) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=5e-41 Score=272.48 Aligned_cols=133 Identities=26% Similarity=0.382 Sum_probs=123.3
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeeccch---hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRGE---KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVA 137 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~~---~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa 137 (231)
+++||||||+||||||+||. .+++|+.++.+++. ..+.+|.+++++|+|++||||+|++|+|+++++++.++.|+
T Consensus 2 mriLgiD~G~kriGvAisd~~~~~a~pl~~i~~~~~~~~~~~~~l~~ii~e~~i~~iViGlP~~~dg~~~~~~~~~~~f~ 81 (140)
T d1vhxa_ 2 LRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFA 81 (140)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHH
T ss_pred ceEEEEEeCCCEEEEEEecCCCCcccceeeEeecccccchHHHHHHHHHHhhccceEEEecccccCCcchhHHHHHHHHH
Confidence 58999999999999999995 47999999976543 24789999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCCcHHHHHHHHHHHHcccC
Q 026881 138 GRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTDAYAAVILLERYFSMSG 198 (231)
Q Consensus 138 ~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~vD~lAA~IILq~yLd~~~ 198 (231)
+.|+..+ ++||++|||||||.+|+++|++.|.+++++|+.+|++||++|||+||++.+
T Consensus 82 ~~l~~~~---~i~V~~~DEr~TS~~A~~~l~~~~~~~~~~k~~iD~~AA~iILe~~L~~~n 139 (140)
T d1vhxa_ 82 KVLETTY---NVPVVLWDERLTTMAAEKMLIAADVSRQKRKKVIDKMAAVMILQGYLDSLN 139 (140)
T ss_dssp HHHHHHH---CSCEEEECCSSCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhccCC---CccEEEeecccCHHHHHHHHHHcCCCcccccccHHHHHHHHHHHHHHHHhc
Confidence 9999875 899999999999999999999999999999999999999999999999754
No 3
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=99.97 E-value=6.7e-31 Score=201.36 Aligned_cols=95 Identities=29% Similarity=0.318 Sum_probs=87.2
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeeccc-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGR 139 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~ 139 (231)
+++||||||+||||+|+||. .+|+|+.++.+.+ ..++.+|.+++++|+|+.||||+|++|||+++++++.+++|+++
T Consensus 1 MriLglD~G~kriGiAisd~~~~~a~pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~dG~~~~~~~~v~~f~~~ 80 (98)
T d1iv0a_ 1 MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA 80 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCCCEEEEECCCHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHH
T ss_pred CcEEEEEcCCCEEEEEEecCCCCeEcceEEEECCCchHHHHHHHHHHHhhccceeEcccccccCCCcCHHHHHHHHHHHH
Confidence 47999999999999999995 5899999998655 45678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcEEEecCCCcHH
Q 026881 140 LAVRAAERGWRVYLLDEHRTSA 161 (231)
Q Consensus 140 L~~~~~~~~lpV~lvDER~TT~ 161 (231)
|++ .++||++|||||||+
T Consensus 81 L~~----~~lpv~~~DErlTSk 98 (98)
T d1iv0a_ 81 LRA----RGVEVELWDERFTTK 98 (98)
T ss_dssp HHH----TTCEEEEECCSCCCC
T ss_pred Hhh----CCCCEEEEcCCCCCC
Confidence 975 389999999999984
No 4
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.79 E-value=2.9e-08 Score=79.65 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=69.5
Q ss_pred CCceEEEEecC-CCeEEEEEecCc-eeeeeeeeec-----cchhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHH
Q 026881 61 RGGFSLGVDLG-LSRTGLALSKGF-CVRPLTVLKL-----RGEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKV 133 (231)
Q Consensus 61 ~~g~iLglD~G-~kRIGvAvsD~~-~A~Pl~~i~~-----~~~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v 133 (231)
++.++||||+| +.-|++|+.|.. ...-..++.. +.++....|.+++++++++.|+|| ||+. ++++
T Consensus 3 ~~~~vlg~DPg~r~gck~AvlD~~G~vld~~viyp~~~~~~~~~a~~~l~~li~k~~p~vIaIG-----NgTa---sre~ 74 (149)
T d3bzka5 3 GPRATLGLDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIG-----NGTA---SRET 74 (149)
T ss_dssp CSCCEEEEECCSTTCEEEEEECTTSCEEEEEEECCSTTTCCHHHHHHHHHHHHHHTTCCEEEEE-----SSTT---HHHH
T ss_pred CCceEEEECCCcccccEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCeEEEEC-----CCcc---HHHH
Confidence 35689999999 889999999942 1112233321 123345689999999999999999 8886 4778
Q ss_pred HHHHHHHHHHhccCCCcEEEecCCCcHH
Q 026881 134 RSVAGRLAVRAAERGWRVYLLDEHRTSA 161 (231)
Q Consensus 134 ~~Fa~~L~~~~~~~~lpV~lvDER~TT~ 161 (231)
++|...|.+.....+++|+++||...+.
T Consensus 75 ~~~v~~l~~~~~~~~i~~~iV~e~gAsv 102 (149)
T d3bzka5 75 DKLAGELIKKYPGMKLTKIMVSEAGASV 102 (149)
T ss_dssp HHHHHHHHHHCGGGCCEEEEECCTTHHH
T ss_pred HHHHHHHHHhCCCCCcEEEEEeccchhh
Confidence 8888888766444589999999987654
No 5
>d1hjra_ c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]}
Probab=97.60 E-value=0.00039 Score=54.96 Aligned_cols=96 Identities=19% Similarity=0.213 Sum_probs=61.3
Q ss_pred eEEEEecCCCeEEEEEec--Cceee--eeeeeeccch-------hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCh-hHH
Q 026881 64 FSLGVDLGLSRTGLALSK--GFCVR--PLTVLKLRGE-------KLELQLLEIAQREETDEFIIGLPKSWDGSETP-QSN 131 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD--~~~A~--Pl~~i~~~~~-------~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~-~~~ 131 (231)
.|||||+|+.++|+||-| +-..+ -..+|..+.. .+.+.|.+++++|+|+.++|=-|+-..+..+. ..-
T Consensus 2 iILGIDPGl~~~G~avid~~~~~~~~v~~g~i~t~~~~~~~Rl~~i~~~l~~li~~~~Pd~vaiE~~f~~~n~~sa~~l~ 81 (158)
T d1hjra_ 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLG 81 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHH
T ss_pred EEEEEccCCCceEEEEEEeeCCEEEEEEeeEEeCCCCChHHHHHHHHHHHHHHHhccCCCEEEEEeehhccCHHHHHHHH
Confidence 589999999999999988 32211 2345543322 24568999999999999999988755444332 223
Q ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHH
Q 026881 132 KVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDR 166 (231)
Q Consensus 132 ~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~ 166 (231)
+++--+..... +.++||+.+ |..+.++.
T Consensus 82 ~arG~i~l~a~---~~~ipi~e~----~P~~vKk~ 109 (158)
T d1hjra_ 82 QARGVAIVAAV---NQELPVFEY----AARQVKQT 109 (158)
T ss_dssp HHHHHHHHHHH---TTTCCEEEE----EHHHHHHH
T ss_pred HHHHHHHHHHH---HcCcceeec----chhhhhee
Confidence 33333332222 368999876 55555544
No 6
>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}
Probab=96.27 E-value=0.01 Score=43.11 Aligned_cols=97 Identities=10% Similarity=0.006 Sum_probs=62.4
Q ss_pred eEEEEecCCCeEEEEEecC--ceeeeeeeeeccc-hhHHHHHHHHHHHcCCCEEEEeecCCCCC--------CC--Ch--
Q 026881 64 FSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDG--------SE--TP-- 128 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~~i~~IVVGLPl~~dG--------t~--s~-- 128 (231)
.++|||.|..+|-+++.|. .+. -...++... +.....+.+.+.++++..+-||.|=-.+. .. ++
T Consensus 1 l~~giDiGgT~i~~~l~d~~g~i~-~~~~~~t~~~~~~~~~i~~~~~~~~~~~igi~~~G~v~~~~~~~~~g~v~~~~~~ 79 (118)
T d1xc3a1 1 MLGGIEAGGTKFVCAVGREDGTII-DRIEFPTKMPDETIEKVIQYFSQFSLQAIGIGSFGPVDNDKTSQTYGTITATPKA 79 (118)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEE-EEEEEECCCHHHHHHHHHHHHTTSCCSEEEEEECSSBCCCTTSTTTTSBCCCSST
T ss_pred CEEEEEeccCEEEEEEEcCCCCEE-EEEEecCCCHHHHHHHHHHHHhhccceecceeEEeeeecCCCccceeEEEcCCcc
Confidence 4789999999999999993 222 112233222 34567888888899999999999943221 11 10
Q ss_pred hHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 129 QSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 129 ~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
..+. -.+++.|++.+ ++||++.+.--.-.-|+.
T Consensus 80 ~w~~-~~l~~~l~~~~---~~pv~i~NDana~algE~ 112 (118)
T d1xc3a1 80 GWRH-YPFLQTVKNEM---KIPVGFSTDVNAAALGEF 112 (118)
T ss_dssp TTBT-CCHHHHHHHHH---CSCEEEEEHHHHHHHHHH
T ss_pred cccC-cCHHHHHHHHH---CCCEEEeehHHHHHHHHH
Confidence 0011 23677788775 899999887555544444
No 7
>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}
Probab=95.66 E-value=0.026 Score=40.33 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=53.7
Q ss_pred eEEEEecCCCeEEEEEecC---ceeeeeeeeec--cc-hhHHHHHHHHHH----Hc-CCCEEEEeecCCCCCCCChhH--
Q 026881 64 FSLGVDLGLSRTGLALSKG---FCVRPLTVLKL--RG-EKLELQLLEIAQ----RE-ETDEFIIGLPKSWDGSETPQS-- 130 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~---~~A~Pl~~i~~--~~-~~~~~~L~~li~----e~-~i~~IVVGLPl~~dGt~s~~~-- 130 (231)
++||||.|..+|=+|+.|. +..+ ..++. .. ......|.++++ +. .+.+|-||.|=..|-..+...
T Consensus 1 MyiGiDiGgT~i~~~l~d~~g~i~~~--~~~~t~~~~~~~~~~~i~~~i~~~~~~~~~~~~igi~~pG~vd~~~g~i~~~ 78 (117)
T d2ap1a2 1 MYYGFDIGGTKIALGVFDSTRRLQWE--KRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTLYAA 78 (117)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEE--EEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCCBCT
T ss_pred CEEEEEECcceEEEEEEeCCCCEEEE--EEEeecccCHHHHHHHHHHHHHHHHhhcCcceeEEEecCCccccccceeecc
Confidence 5899999999999999983 2221 12221 11 233444444443 33 577899999954432221110
Q ss_pred ----HHHHHHHHHHHHHhccCCCcEEEecCCCcHH
Q 026881 131 ----NKVRSVAGRLAVRAAERGWRVYLLDEHRTSA 161 (231)
Q Consensus 131 ----~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~ 161 (231)
-.=..+++.|++++ ++||++-+.--...
T Consensus 79 ~~~~w~~~~l~~~l~~~~---~~pv~l~NDan~aa 110 (117)
T d2ap1a2 79 NVPAASGKPLRADLSARL---DRDVRLDNDANCFA 110 (117)
T ss_dssp TCTTTTTSCHHHHHHHHH---TSCEEEEEHHHHHH
T ss_pred CccccCCCcHHHHHHHHh---CCCEEEEeHHHhhH
Confidence 00023566777764 89999887744433
No 8
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}
Probab=95.36 E-value=0.022 Score=41.16 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=56.9
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeec---cc-hhHHHHHHHHHHHc--CCCEEEEeecCCCCCCC--Chh---
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKL---RG-EKLELQLLEIAQRE--ETDEFIIGLPKSWDGSE--TPQ--- 129 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~---~~-~~~~~~L~~li~e~--~i~~IVVGLPl~~dGt~--s~~--- 129 (231)
+++||||.|..+|=+|+.|. .+.. ...++. .. +.+.+.+.+++++. ++.+|-||.|=-.+... ...
T Consensus 1 M~~lgiDiGgT~i~~~l~d~~G~i~~-~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~igI~~pG~v~~~~~~~~~~~~ 79 (119)
T d2aa4a1 1 MTTLAIDIGGTKLAAALIGADGQIRD-RRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHN 79 (119)
T ss_dssp CCEEEEEECSSEEEEEEECTTCCEEE-EEEEECCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECSSGGG
T ss_pred CeEEEEEeCcCEEEEEEEcCCCCEEE-eEEEeccccCcHHHHHHHHHHHHHHhhccCceEEEEeeeeEcCCCcEEEccCc
Confidence 36899999999999999983 2211 111211 11 34556777777764 58899999884332211 111
Q ss_pred ---HHHHHHHHHHHHHHhccCCCcEEEecCCCcH
Q 026881 130 ---SNKVRSVAGRLAVRAAERGWRVYLLDEHRTS 160 (231)
Q Consensus 130 ---~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT 160 (231)
... ..+++.|++++ ++||++.+.--.-
T Consensus 80 l~~w~~-~~l~~~l~~~~---~~pv~i~NDanaa 109 (119)
T d2aa4a1 80 LGGLLH-FPLVKTLEQLT---NLPTIAINDAQAA 109 (119)
T ss_dssp GGGGTT-CCHHHHHHHHH---CSCEEEEEHHHHH
T ss_pred cccccC-CCHHHHHHHHh---CCCEEEEehHHHH
Confidence 011 23577788775 8999998874433
No 9
>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=94.60 E-value=0.04 Score=39.85 Aligned_cols=57 Identities=14% Similarity=0.041 Sum_probs=41.2
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeecc--chhHHHHHHHHHHHcCCCEEEEeecC
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLR--GEKLELQLLEIAQREETDEFIIGLPK 120 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~--~~~~~~~L~~li~e~~i~~IVVGLPl 120 (231)
+.++|||.|.-+|=+|+.|. ... -...++.. -.+....+.+.+.++++.+|-||.|=
T Consensus 1 M~i~~iDiGgT~i~~~l~d~~g~i~-~~~~~~t~~~~~~~~~~i~~~~~~~~i~gIGi~~pG 61 (114)
T d2gupa1 1 MTIATIDIGGTGIKFASLTPDGKIL-DKTSISTPENLEDLLAWLDQRLSEQDYSGIAMSVPG 61 (114)
T ss_dssp CCEEEEEEETTEEEEEEECTTCCEE-EEEEECCCSSHHHHHHHHHHHHTTSCCSEEEEEESS
T ss_pred CeEEEEEeCcccEEEEEEcCCCCEE-EEEEEcccccHHHHHHHHHHHhhhcccceEEEeccc
Confidence 36899999999999999983 221 11223221 14566778888888999999999984
No 10
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=94.59 E-value=0.028 Score=40.73 Aligned_cols=102 Identities=20% Similarity=0.176 Sum_probs=59.6
Q ss_pred ceEEEEecCCCeEEEEEec--C-ceeeeeeeeecc-chh----HHHHHHHHHHH-----cCCCEEEEeecCCCCCCCC--
Q 026881 63 GFSLGVDLGLSRTGLALSK--G-FCVRPLTVLKLR-GEK----LELQLLEIAQR-----EETDEFIIGLPKSWDGSET-- 127 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~-~~A~Pl~~i~~~-~~~----~~~~L~~li~e-----~~i~~IVVGLPl~~dGt~s-- 127 (231)
..+||||+|...|-+++.| + .+.+-...+... ... +...+.+++++ .++.+|-|+.|=..+...+
T Consensus 4 ~~~l~i~i~~~~i~~~l~Dl~G~~l~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~gIgi~~pG~v~~~~~~~ 83 (129)
T d1z6ra2 4 WHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIV 83 (129)
T ss_dssp CEEEEEEEETTEEEEEEEETTCCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTEE
T ss_pred eEEEEEEECCCEEEEEEEcCCCCEEEEEEeeccccchhHHHHHHHHHHHHHHHhcCcccccceeEEEeeeeeeeecccce
Confidence 5799999999999999999 3 233211122211 122 23445555554 2566788888832221110
Q ss_pred ---hhHH--HHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 128 ---PQSN--KVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 128 ---~~~~--~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
+... .=-.+.+.|++.+ ++||++.+.--+...|+.++
T Consensus 84 ~~~~~~~~w~~~~l~~~l~~~~---~~pV~~~NDa~a~alaE~~~ 125 (129)
T d1z6ra2 84 HRMPFYEDVKEMPLGEALEQHT---GVPVYIQHDISAWTMAEALF 125 (129)
T ss_dssp EECTTCTTCSSBCHHHHHHHHH---SSCEEEEEHHHHHHHHHHHH
T ss_pred eccCcchhccCcchHHHHHHhc---CCCEEEEehHHHHHHHHHhh
Confidence 1000 1124566777764 79999999887777766554
No 11
>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}
Probab=94.25 E-value=0.028 Score=40.55 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=56.8
Q ss_pred ceEEEEecCCCeEEEEEec--C-ceeeeeeeeeccc-hhH----HHHHHHHHHHcC-----CCEEEEeecCCCCCCCC--
Q 026881 63 GFSLGVDLGLSRTGLALSK--G-FCVRPLTVLKLRG-EKL----ELQLLEIAQREE-----TDEFIIGLPKSWDGSET-- 127 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~-~~A~Pl~~i~~~~-~~~----~~~L~~li~e~~-----i~~IVVGLPl~~dGt~s-- 127 (231)
-.+||||.|..+|-+|+.| + ++.+--..+...+ +.. ...+.+++.+.+ +.+|-||.|=..+...+
T Consensus 4 ~~~lgi~ig~~~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gIgi~~pG~vd~~~~~~ 83 (128)
T d1z05a3 4 WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIV 83 (128)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEE
T ss_pred CEEEEEEECCCEEEEEEEcCCCCEEEEEEeccccCCHHHHHHHHHHHHHHHHHHcccccccceEEEeeeeeeeeccceee
Confidence 4689999999999999999 3 2332111111112 222 345556666554 45667887732221110
Q ss_pred -----hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHH
Q 026881 128 -----PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDR 166 (231)
Q Consensus 128 -----~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~ 166 (231)
..... ..+.+.|++++ ++||++.+.-.....|+..
T Consensus 84 ~~~~~~~~~~-~~l~~~l~~~~---~~PV~l~NDana~a~aE~~ 123 (128)
T d1z05a3 84 LQMPHYNVKN-LALGPEIYKAT---GLPVFVANDTRAWALAEKL 123 (128)
T ss_dssp EECSSSBCSS-BCHHHHHHHHH---CSCEEEEEHHHHHHHHHHH
T ss_pred eccccCCCCC-cchHHHHHHhc---CCCEEEEehHHHHHHHHHh
Confidence 01111 13566777765 8999998876655555544
No 12
>d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=93.64 E-value=0.11 Score=37.30 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=57.5
Q ss_pred ceEEEEecCCCeEEEEEec--C-ceeeeeeeeec-cc-hhHHHHHHHHH----H-----HcCCCEEEEeecCCCCCCCCh
Q 026881 63 GFSLGVDLGLSRTGLALSK--G-FCVRPLTVLKL-RG-EKLELQLLEIA----Q-----REETDEFIIGLPKSWDGSETP 128 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~-~~A~Pl~~i~~-~~-~~~~~~L~~li----~-----e~~i~~IVVGLPl~~dGt~s~ 128 (231)
+.++|||+|..+|-+++.| + +.++-...+.. .+ +.....+.+++ . ..++.+|-||.|=..|...+.
T Consensus 4 ~~~igidig~~~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 83 (128)
T d2hoea3 4 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGI 83 (128)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTE
T ss_pred EEEEEEEECCCEEEEEEEcCCCCEEEEEEEecccCCCHHHHHHHHHHHHHHHHHHhccccCceEEEecceeeeEcCCCCE
Confidence 5899999999999999999 3 23321111111 11 22223233222 2 246888999988433222110
Q ss_pred -------hHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHH
Q 026881 129 -------QSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM 167 (231)
Q Consensus 129 -------~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l 167 (231)
-... -.+.+.|++++ ++||++.++--....|+..+
T Consensus 84 i~~~~~l~w~~-~~l~~~l~~~~---~~pv~i~NDa~~~alaE~~f 125 (128)
T d2hoea3 84 IIDPRNFPLSQ-IPLANLLKEKY---GIEVWVENDADMGAVGEKWY 125 (128)
T ss_dssp ECCCSSCTTBT-SCHHHHHHHHH---CSEEEEEEHHHHHHHHHHHH
T ss_pred EEeeccccccC-CchHHHHHHHc---CCCEEEEeHHHHHHHHHHHh
Confidence 0111 13566777764 89999998866655555543
No 13
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=90.66 E-value=1.2 Score=31.71 Aligned_cols=85 Identities=14% Similarity=0.074 Sum_probs=58.3
Q ss_pred eEEEEecCCCeEEEEEecCc-eeeeeeeeec-cchhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCChhHHHHHHH
Q 026881 64 FSLGVDLGLSRTGLALSKGF-CVRPLTVLKL-RGEKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSV 136 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~~-~A~Pl~~i~~-~~~~~~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~~~~~v~~F 136 (231)
+|||||-=.+.++||+.+.. +..-.....+ ..+.+...+.+++++. +++.|+|+.= -|+.+. .+-.-.|
T Consensus 1 kiLaIdTS~~~~sval~~~~~i~~~~~~~~~~h~~~l~~~i~~~l~~~~~~~~di~~i~v~~G---PGsfTg-lRig~s~ 76 (106)
T d1okja1 1 RILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALAYGRG---PGSFTG-VRIGIGI 76 (106)
T ss_dssp EEEEEECSSSEEEEEEEETTEEEEEEEECCSSTTTTHHHHHHHHHHHTTCCGGGCCEEEEEEE---SSCHHH-HHHHHHH
T ss_pred CEEEEECCCcceEEEEEECCEEEEEEEEccHHHHHHHHHHHHHHHHhcCCcceeeeEEEEeec---cCcccc-chHHHHH
Confidence 58999999999999999843 2221222222 2345667788888763 5788998821 244443 3666789
Q ss_pred HHHHHHHhccCCCcEEEec
Q 026881 137 AGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 137 a~~L~~~~~~~~lpV~lvD 155 (231)
++.|... .++|++-++
T Consensus 77 akgla~~---~~ip~~~v~ 92 (106)
T d1okja1 77 AQGLALG---AELPMIGVS 92 (106)
T ss_dssp HHHHHHH---TTCCEEEEE
T ss_pred HHHHHHH---cCCCEEEeC
Confidence 9999876 489999885
No 14
>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}
Probab=90.17 E-value=0.27 Score=35.11 Aligned_cols=99 Identities=11% Similarity=0.080 Sum_probs=53.5
Q ss_pred ceEEEEecCCCeEEEEEecC---ceeeeeeeeec---cc-hhHHHHHHHHHHH----c----CCCEEEEeecCCCC-CCC
Q 026881 63 GFSLGVDLGLSRTGLALSKG---FCVRPLTVLKL---RG-EKLELQLLEIAQR----E----ETDEFIIGLPKSWD-GSE 126 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~---~~A~Pl~~i~~---~~-~~~~~~L~~li~e----~----~i~~IVVGLPl~~d-Gt~ 126 (231)
..+||||+|..+|=+++.|. .+..-...++. .. +...+.+.+++++ . .+.+|-||.|-..+ |..
T Consensus 2 ~~vlGiDiGgT~i~~~l~d~~~g~i~~~~~~~~t~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~gIGi~~pG~vd~~~~ 81 (129)
T d1woqa1 2 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQHGVV 81 (129)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSCEETTEE
T ss_pred CCEEEEEECcceEEEEEEECCCCEEEEEEeecccccCCCHHHHHHHHHHHHHHHHhccccccccceeeecceeeEecCeE
Confidence 36999999999999998872 22211122221 11 2233444444442 2 35567788884333 111
Q ss_pred ----C--hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHH
Q 026881 127 ----T--PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVD 165 (231)
Q Consensus 127 ----s--~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~ 165 (231)
+ +..+. -.+.+.|++++ ++||++.+.--...-|+.
T Consensus 82 ~~~~~~~~~w~~-~~l~~~l~~~~---~~pv~i~NDan~aalgE~ 122 (129)
T d1woqa1 82 HSAANVDKSWLN-TDIDALLTARL---GRPVEVINDADAAGLAEA 122 (129)
T ss_dssp CCCTTSCGGGTT-CBHHHHHHHHH---TSCEEEEEHHHHHHHHHH
T ss_pred EEecccCCCccc-ccchhhHHHhc---CCcEEEEEhHHHHHHHHH
Confidence 1 11111 23667787775 799998876544444433
No 15
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]}
Probab=87.95 E-value=0.79 Score=36.83 Aligned_cols=60 Identities=17% Similarity=0.085 Sum_probs=42.9
Q ss_pred eEEEEecCCCeEEEEEecC--ceeeeeeeeeccc-hhHHHHHHHHHHHc--CCCEEEEeecCCCC
Q 026881 64 FSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQRE--ETDEFIIGLPKSWD 123 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~--~i~~IVVGLPl~~d 123 (231)
..|++|.|--+|=+|+.|. .......+++..+ +.+.+.|.++++++ ++..|.||.|=-.|
T Consensus 2 y~L~~DIGGT~ir~glvd~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~igI~~pG~vd 66 (319)
T d1sz2a1 2 YALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPIT 66 (319)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHSCCCCCEEEEEESSCCC
T ss_pred EEEEEEEChhheeeEEEECCCCEEEEEEEeCCCCHhHHHHHHHHHHHhcCCCcceEEEEcccCCC
Confidence 5799999999999999983 2333444444332 34667788888877 58899999984433
No 16
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}
Probab=86.58 E-value=0.15 Score=39.37 Aligned_cols=20 Identities=25% Similarity=0.488 Sum_probs=18.1
Q ss_pred ceEEEEecCCCeEEEEEecC
Q 026881 63 GFSLGVDLGLSRTGLALSKG 82 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~ 82 (231)
|.++|||+|+..+.+|+.+.
T Consensus 1 g~vvGIDfGTt~s~va~~~~ 20 (185)
T d1bupa1 1 GPAVGIDLGSTYSCVGVFQH 20 (185)
T ss_dssp CCCEEEEECSSEEEEEEEET
T ss_pred CCEEEEEcChhcEEEEEEEC
Confidence 57999999999999999873
No 17
>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}
Probab=83.07 E-value=3.9 Score=28.05 Aligned_cols=64 Identities=16% Similarity=0.076 Sum_probs=42.5
Q ss_pred ceEEEEecCCCeEEEEEecC--ceeeeeeeeeccc-hhHHHHHHHHHHHcC--CCEEEEeecCCCCCCC
Q 026881 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREE--TDEFIIGLPKSWDGSE 126 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~~A~Pl~~i~~~~-~~~~~~L~~li~e~~--i~~IVVGLPl~~dGt~ 126 (231)
..+|++|.|.-++=+|+.|. ....-....+... ..+...+.+++++++ +..+.+|.|-..+|..
T Consensus 2 ~~~L~~DIGGTn~r~alv~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~ag~~~~~~ 70 (110)
T d1q18a1 2 KYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDW 70 (110)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCSEEEEEESSCCCSSE
T ss_pred cEEEEEEECchhEEEEEEEcCCCeEEEEEeecccchhhHHHHHHHHHhhcccccceEEEcccccccCcE
Confidence 36899999999999998873 2222223333222 235566777777664 7899999887776654
No 18
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=82.87 E-value=0.25 Score=38.05 Aligned_cols=19 Identities=32% Similarity=0.622 Sum_probs=17.0
Q ss_pred eEEEEecCCCeEEEEEecC
Q 026881 64 FSLGVDLGLSRTGLALSKG 82 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~ 82 (231)
+|+|||||+..+.+|+.++
T Consensus 1 ~VvGIDfGTt~s~va~~~~ 19 (183)
T d1dkgd1 1 KIIGIDLGTTNSCVAIMDG 19 (183)
T ss_dssp CCCEEECCSSEEEEEEEET
T ss_pred CEEEEEcChhcEEEEEEEC
Confidence 4799999999999999873
No 19
>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}
Probab=81.97 E-value=6.2 Score=27.38 Aligned_cols=84 Identities=17% Similarity=0.082 Sum_probs=54.1
Q ss_pred ceEEEEecCCCeEEEEEecCceeeeeeee-ec-cchhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCh-hHHHHH
Q 026881 63 GFSLGVDLGLSRTGLALSKGFCVRPLTVL-KL-RGEKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETP-QSNKVR 134 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~~A~Pl~~i-~~-~~~~~~~~L~~li~e~-----~i~~IVVGLPl~~dGt~s~-~~~~v~ 134 (231)
+.+|+||-- .++.||+.++....-...- .+ ..+.+...+++++++. +++.|+|+ .|--+- -.+-.-
T Consensus 1 M~iLaidTS-~~~sval~~~~~~~~~~~~~~~~hs~~l~~~i~~~l~~~~~~~~di~~i~v~-----~GPGsfTglRig~ 74 (103)
T d2a6aa1 1 MNVLALDTS-QRIRIGLRKGEDLFEISYTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVG-----IGPGGLTGLRVGI 74 (103)
T ss_dssp CEEEEEECS-SSEEEEEEETTEEEEEEEESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEE-----CCSSCHHHHHHHH
T ss_pred CcEEEEEcC-cccEEEEEECCEEEEEeccCchHHHHHHHHHHHHHHHHcCCCHHHhHHHhhc-----CCCCcchhHHHHH
Confidence 369999986 5799999986422112221 11 2344566777877764 57799999 543332 235567
Q ss_pred HHHHHHHHHhccCCCcEEEec
Q 026881 135 SVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 135 ~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.|++.|... .++|++-++
T Consensus 75 s~akgla~~---~~ip~~gis 92 (103)
T d2a6aa1 75 ATVVGLVSP---YDIPVAPLN 92 (103)
T ss_dssp HHHHHHHGG---GTCCEEEEC
T ss_pred HHHHHHHHH---cCCCEEEeC
Confidence 888888865 389998764
No 20
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}
Probab=76.96 E-value=2.4 Score=32.24 Aligned_cols=48 Identities=15% Similarity=0.271 Sum_probs=29.7
Q ss_pred ceEEEEecCCCeEEEEEecC---ceeeeeeeeeccchhHHHHHHHHHHHcC
Q 026881 63 GFSLGVDLGLSRTGLALSKG---FCVRPLTVLKLRGEKLELQLLEIAQREE 110 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~---~~A~Pl~~i~~~~~~~~~~L~~li~e~~ 110 (231)
+.+||||.|.-+|=+|+.|. ++.+-...-..+.++..+.+.+++++..
T Consensus 2 M~~lGIDiGGT~~k~~vvd~~g~il~~~~~~t~~~~~~~~~~i~~~l~~~~ 52 (259)
T d1huxa_ 2 IYTLGIDVGSTASKCIILKDGKEIVAKSLVAVGTGTSGPARSISEVLENAH 52 (259)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCSSCCHHHHHHHHHHHHHT
T ss_pred cEEEEEEeCcceEEEEEEcCCCcEEEEEEecCCCCHHHHHHHHHHHHHHcc
Confidence 57999999999999999983 2222111111122345567777776553
No 21
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.03 E-value=15 Score=25.66 Aligned_cols=87 Identities=16% Similarity=0.098 Sum_probs=48.7
Q ss_pred ceEEEEecCCCeEEEEEecC--c-eeeeee---eeeccc-hhHHHHHHHH----HHH------cCCCEEEEeecCCCCCC
Q 026881 63 GFSLGVDLGLSRTGLALSKG--F-CVRPLT---VLKLRG-EKLELQLLEI----AQR------EETDEFIIGLPKSWDGS 125 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~--~-~A~Pl~---~i~~~~-~~~~~~L~~l----i~e------~~i~~IVVGLPl~~dGt 125 (231)
..++|||-|.-+|=+++.|. . +++... .....+ +...+.|.+. +++ .++..+.+|+ .|-
T Consensus 3 ~~~~GIDgGGTkT~~~l~d~~G~~l~~~~~g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~i~~i~~Gl----AG~ 78 (117)
T d2ch5a2 3 AIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSL----SGG 78 (117)
T ss_dssp CEEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEE----TTT
T ss_pred cEEEEEEcChhhEEEEEECCCCCEEEEEEcCCCCcchhhHHHHHHHHHHHHHHHHHHhcCCCCccccEEEEEe----ecc
Confidence 36899999999999999883 2 322211 110011 1223333333 322 3578899996 565
Q ss_pred CChhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 126 ETPQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 126 ~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.++ ...+.+.+.|++.++....+|+..+
T Consensus 79 ~~~--~~~~~l~~~l~~~~~~~~~~v~v~n 106 (117)
T d2ch5a2 79 DQE--DAGRILIEELRDRFPYLSESYLITT 106 (117)
T ss_dssp TCH--HHHHHHHHHHHHHCTTSBSCEEEEE
T ss_pred Ccc--hhHHHHHHHHHHHCCCCCceEEEec
Confidence 443 3445677778777652123466554
No 22
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}
Probab=67.95 E-value=4.5 Score=27.85 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=18.9
Q ss_pred CCceEEEEecCCCeEEEEEec
Q 026881 61 RGGFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 61 ~~g~iLglD~G~kRIGvAvsD 81 (231)
.+..+||||.|.-+|=.++.|
T Consensus 2 sm~y~lGID~GGT~tk~~l~d 22 (114)
T d1zc6a1 2 SIRYLIGVDGGGTGTRIRLHA 22 (114)
T ss_dssp CCCEEEEEEECSSCEEEEEEE
T ss_pred CccEEEEEEcCcceEEEEEEc
Confidence 356899999999999999998
No 23
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}
Probab=67.41 E-value=8.3 Score=31.58 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=46.1
Q ss_pred HHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe---cCCCcHHHHHHHHHHcCCCc
Q 026881 104 EIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL---DEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 104 ~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv---DER~TT~eA~~~l~e~G~~r 174 (231)
+.+++.++++||+|- ++.||+... ...++|.... .+++++|. |+----.+|-+.|.+.|+.+
T Consensus 79 ~~~k~~G~dGvV~G~-L~~dg~iD~------~~~~~L~~~a--~~l~vTFHRAfD~~~d~~~al~~Li~lG~~r 143 (247)
T d1twda_ 79 RTVRELGFPGLVTGV-LDVDGNVDM------PRMEKIMAAA--GPLAVTFHRAFDMCANPLYTLNNLAELGIAR 143 (247)
T ss_dssp HHHHHTTCSEEEECC-BCTTSSBCH------HHHHHHHHHH--TTSEEEECGGGGGCSCHHHHHHHHHHHTCCE
T ss_pred HHHHHcCCCeEEEEE-ECCCCCccH------HHHHHHHHHh--cccCeeeehhhhhhCCHHHHHHHHHhcCCCe
Confidence 345678999999994 788898873 2333344433 37899884 88888999999999988755
No 24
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=67.14 E-value=5.9 Score=28.99 Aligned_cols=51 Identities=8% Similarity=-0.040 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL 154 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv 154 (231)
+..+++.+++.+.++|.||+.==+...| .....+..|.+.|++ .++|++++
T Consensus 19 eale~~~~~~~~~~~D~vv~~GDl~~~~---~~~~~~~~~~~~L~~----~~~pv~~i 69 (228)
T d1uf3a_ 19 EALEKFVKLAPDTGADAIALIGNLMPKA---AKSRDYAAFFRILSE----AHLPTAYV 69 (228)
T ss_dssp HHHHHHHTHHHHHTCSEEEEESCSSCTT---CCHHHHHHHHHHHGG----GCSCEEEE
T ss_pred HHHHHHHHHHhhcCCCEEEECCCCCCCC---ccchHHHHhhhhhcc----ccceEEEE
Confidence 4567788888889999998872222222 234556667777765 37898877
No 25
>d2f9wa2 c.55.1.13 (A:1-114) Type III pantothenate kinase, CoaX {Pseudomonas aeruginosa [TaxId: 287]}
Probab=64.69 E-value=12 Score=25.62 Aligned_cols=20 Identities=25% Similarity=0.237 Sum_probs=17.9
Q ss_pred eEEEEecCCCeEEEEEecCc
Q 026881 64 FSLGVDLGLSRTGLALSKGF 83 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~~ 83 (231)
|+|.||.|..+|=+|+.++.
T Consensus 1 M~LliDiGNT~iK~~~~~~~ 20 (114)
T d2f9wa2 1 MILELDCGNSLIKWRVIEGA 20 (114)
T ss_dssp EEEEEEECSSCEEEEEEETT
T ss_pred CEEEEEECCCeEEEEEEECC
Confidence 68999999999999999853
No 26
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=64.31 E-value=6.7 Score=27.29 Aligned_cols=52 Identities=21% Similarity=0.261 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.....|.+.+++++++.||+|- .|..+-.....-..+++|-.+ ..+||..|-
T Consensus 94 ~~~~~i~~~a~~~~~dlIv~g~----~~~~~~~~~l~Gs~~~~ll~~---~~~pVlvV~ 145 (147)
T d1tq8a_ 94 APVDALVNLADEEKADLLVVGN----VGLSTIAGRLLGSVPANVSRR---AKVDVLIVH 145 (147)
T ss_dssp SHHHHHHHHHHHTTCSEEEEEC----CCCCSHHHHHTBBHHHHHHHH---TTCEEEEEC
T ss_pred ChHHHHHHhhhccceeEEEecC----CCCCcccccccccHHHHHHHh---CCCCEEEEe
Confidence 3567899999999999999993 232222111122235556555 378998774
No 27
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}
Probab=56.33 E-value=30 Score=24.58 Aligned_cols=85 Identities=12% Similarity=0.140 Sum_probs=51.6
Q ss_pred CceEEEEecCCCeEEEEEec--Cceeeeeeeee----c-c-----c---h-------hHHHHHHHHHHHcCCCEE-EEee
Q 026881 62 GGFSLGVDLGLSRTGLALSK--GFCVRPLTVLK----L-R-----G---E-------KLELQLLEIAQREETDEF-IIGL 118 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD--~~~A~Pl~~i~----~-~-----~---~-------~~~~~L~~li~e~~i~~I-VVGL 118 (231)
++++-+||.|+--+=+.|.+ +....++.... . . + . +....+.+++++|+++.+ +||
T Consensus 2 mmriavIDIGSNsirl~I~~~~~~~~~~l~~~~~~~~Lg~~~~~~g~ls~~~i~~~~~~l~~f~~~~~~~~v~~~~~va- 80 (126)
T d1t6ca1 2 IMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERVKAVA- 80 (126)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE-
T ss_pred CCEEEEEEEccceEEEEEEEecCCcceeeeeeeEEEEcccCccccCCCCHHHHHHHHHHHHHHHHHHHhcCccceEEeh-
Confidence 46789999999999999887 22222222111 0 0 0 0 123456677788999755 445
Q ss_pred cCCCCCCCC-hhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 119 PKSWDGSET-PQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 119 Pl~~dGt~s-~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
|.. ..+.-...|.+++++. +++++...|.
T Consensus 81 ------TsA~R~A~N~~~~~~~i~~~---tgi~i~Iisg 110 (126)
T d1t6ca1 81 ------TEAIRRAKNAEEFLERVKRE---VGLVVEVITP 110 (126)
T ss_dssp ------CHHHHTSTTHHHHHHHHHHH---TCCCEEECCH
T ss_pred ------hHHHHhCcCHHHHHHHHHHH---HCCCeEEeCH
Confidence 221 1223346788888876 4899988873
No 28
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}
Probab=55.81 E-value=3.2 Score=29.71 Aligned_cols=19 Identities=32% Similarity=0.427 Sum_probs=16.5
Q ss_pred eEEEEecCCCeEEEEEecC
Q 026881 64 FSLGVDLGLSRTGLALSKG 82 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~ 82 (231)
+.+|||+||..+-||+.+.
T Consensus 1 ~~iGIDlGTtns~va~~~~ 19 (137)
T d1jcea1 1 KDIGIDLGTANTLVFLRGK 19 (137)
T ss_dssp CEEEEEECSSEEEEEETTT
T ss_pred CeEEEEcChhhEEEEEeCC
Confidence 4689999999999998773
No 29
>d1wb9a3 c.55.6.1 (A:117-269) DNA repair protein MutS, domain II {Escherichia coli [TaxId: 562]}
Probab=55.63 E-value=32 Score=24.64 Aligned_cols=115 Identities=10% Similarity=-0.049 Sum_probs=69.0
Q ss_pred CceEEEEecCCCeEEEEEecCceeeeeeeeeccchhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHH
Q 026881 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLA 141 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~~~A~Pl~~i~~~~~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~ 141 (231)
...++||....+.+|+|..|-.+-. +.+-... ..+.|...+.+.+|..||+- .+-.... .+.
T Consensus 14 nnyL~ai~~~~~~~gla~~DiSTG~-f~~~~~~---~~~~l~~~l~r~~P~Eil~~-----~~~~~~~---------~~~ 75 (153)
T d1wb9a3 14 DNLLAAIWQDSKGFGYATLDISSGR-FRLSEPA---DRETMAAELQRTNPAELLYA-----EDFAEMS---------LIE 75 (153)
T ss_dssp CCCEEEEEECSSCEEEEEECTTTCC-EEEECCC---SHHHHHHHHHHHCCSEEEEE-----TTCCCGG---------GTT
T ss_pred ccEEEEEEECCCeEEEEEEEccccE-EEEEEcC---CHHHHHHHHHhcCCcccccc-----ccchhhh---------HHh
Confidence 3579999999999999999932110 1111111 23567788888999999986 2221110 011
Q ss_pred HHhccCCCcEE-EecCCCcHHHHHHHHHHc-CCCcccc---CCCCcHHHHHHHHHHHHcccCC
Q 026881 142 VRAAERGWRVY-LLDEHRTSAEAVDRMINM-GLSKSAR---QTKTDAYAAVILLERYFSMSGQ 199 (231)
Q Consensus 142 ~~~~~~~lpV~-lvDER~TT~eA~~~l~e~-G~~rkkr---K~~vD~lAA~IILq~yLd~~~~ 199 (231)
....+. +-++.+....|++.+.+. |+..-.. ...-..+.|+..|=.|+.....
T Consensus 76 -----~~~~~~~~~~~~f~~~~~~~~l~~~f~~~~l~~~g~~~~~~~~~A~gaLL~Yl~~tq~ 133 (153)
T d1wb9a3 76 -----GRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQR 133 (153)
T ss_dssp -----TCSSEEEECGGGGCHHHHHHHHHHHHTCSCSGGGTCTTCHHHHHHHHHHHHHHHHHHC
T ss_pred -----hccccccccccccchHHHHHHHHHHcCCCcccccccccchHHHHHHHHHHHHHHHHhc
Confidence 133444 445778888888887653 4433221 1223346778888899987643
No 30
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]}
Probab=54.66 E-value=18 Score=26.89 Aligned_cols=52 Identities=12% Similarity=0.087 Sum_probs=35.5
Q ss_pred EEEEecCCCeEEEEEecCceeeeeeeeeccchhHHHHHHHHHHHcCCCEEEEeecC
Q 026881 65 SLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPK 120 (231)
Q Consensus 65 iLglD~G~kRIGvAvsD~~~A~Pl~~i~~~~~~~~~~L~~li~e~~i~~IVVGLPl 120 (231)
.+|||+|.-+|=+|+.|...- -+...+. +-.+.+.+.+.+..++.+-++-|-
T Consensus 2 kiGIDiGGT~ik~~lvd~~g~-i~~~~~~---~t~~~i~~~i~~~~~~~i~i~g~g 53 (267)
T d2ewsa1 2 KVGIDAGGTLIKIVQEQDNQR-TFKTELT---KNIDQVVEWLNQQQIEKLCLTGGN 53 (267)
T ss_dssp EEEEEECSSEEEEEEECSSCE-EEEEEEG---GGHHHHHHHHHTSCCSEEEEESTT
T ss_pred EEEEEEChhhEEEEEEeCCCc-EEEEEec---ccHHHHHHHHHHhhhhheeeeccc
Confidence 389999999999999884310 0122221 223567778888999999888763
No 31
>d3bexa1 c.55.1.13 (A:1-118) Type III pantothenate kinase, CoaX {Thermotoga maritima [TaxId: 2336]}
Probab=54.52 E-value=28 Score=23.57 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=17.5
Q ss_pred eEEEEecCCCeEEEEEecC
Q 026881 64 FSLGVDLGLSRTGLALSKG 82 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD~ 82 (231)
|+|.||.|-.+|=+|+.++
T Consensus 1 M~L~IDIGNT~ik~~l~~~ 19 (118)
T d3bexa1 1 MYLLVDVGNTHSVFSITED 19 (118)
T ss_dssp EEEEEEECSSEEEEEEESS
T ss_pred CEEEEEECCCeEEEEEEEC
Confidence 6899999999999999885
No 32
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=54.36 E-value=8.9 Score=27.14 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
.....|.++++++++|.||+|--- .+|-.. ...-..++.+... .++||..+=++-|
T Consensus 105 ~~~~~I~~~a~~~~~dliV~G~~~-~~~~~~---~~~GS~a~~vl~~---s~~pVlvV~~~~~ 160 (160)
T d1mjha_ 105 IPHEEIVKIAEDEGVDIIIMGSHG-KTNLKE---ILLGSVTENVIKK---SNKPVLVVKRKNS 160 (160)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCC-SSCCTT---CSSCHHHHHHHHH---CCSCEEEECCCCC
T ss_pred cHHHHHhhhhhccccceEEeccCC-CCcccc---cccCcHHHHHHhc---CCCCEEEEcCCCC
Confidence 355688999999999999999421 111111 0011245555554 4799998876543
No 33
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=51.88 E-value=7 Score=26.90 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHcCCCEEEEeec
Q 026881 97 KLELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLP 119 (231)
.....|.+++++.++|.||+|-.
T Consensus 85 ~~~~~I~~~a~~~~~dliV~G~~ 107 (135)
T d2z3va1 85 VPAEAILQAARAEKADLIVMGTR 107 (135)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESS
T ss_pred ChHHHHHHHhhhhheeeEEeccC
Confidence 35578999999999999999954
No 34
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=51.82 E-value=19 Score=26.40 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEe
Q 026881 97 KLELQLLEIAQREETDEFIIG 117 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVG 117 (231)
...++|.+++.++++|.||++
T Consensus 16 ~~l~~l~~~~~~~~~D~vli~ 36 (257)
T d2yvta1 16 DLLPKLKGVIAEKQPDILVVV 36 (257)
T ss_dssp GGHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHhhcCCCEEEEe
Confidence 456788999999999999998
No 35
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=46.55 E-value=35 Score=23.44 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=41.3
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
+..+.++++.++.|++- ++|.|..+ .+++++|++..+ ++||+++--.-+...+.+.+. .|.
T Consensus 38 ~a~~~l~~~~~dlii~D--~~mp~~~G------~el~~~l~~~~~--~~piI~~t~~~~~~~~~~a~~-~Ga 98 (123)
T d1krwa_ 38 EVLAALASKTPDVLLSD--IRMPGMDG------LALLKQIKQRHP--MLPVIIMTAHSDLDAAVSAYQ-QGA 98 (123)
T ss_dssp HHHHHHTTCCCSEEEEC--CSSSSSTT------HHHHHHHHHHSS--SCCEEESCCCSCHHHHHHHHH-HTE
T ss_pred HHHHHHHhCCCCEEEeh--hhcCCchH------HHHHHHHHHhCC--CCeEEEEecCCCHHHHHHHHH-cCC
Confidence 34455667899999998 45555555 346667766643 899999888777666665554 453
No 36
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}
Probab=41.76 E-value=29 Score=23.43 Aligned_cols=48 Identities=13% Similarity=0.108 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL 154 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv 154 (231)
.....|.++++++++|.||+|- .|... ...-.-++.+-.. ..+||..+
T Consensus 89 ~~~~~I~~~a~~~~~dliV~G~----~~~~~---~~lgs~~~~li~~---~~~pVliV 136 (140)
T d1jmva_ 89 DLGQVLSDAIEQYDVDLLVTGH----HQDFW---SKLMSSTRQVMNT---IKIDMLVV 136 (140)
T ss_dssp CHHHHHHHHHHHTTCCEEEEEE----CCCCH---HHHHHHHHHHHTT---CCSEEEEE
T ss_pred CHHHHHHHhhhhchhhEEEecc----CCCCC---CCcccHHHHHHhc---cCCCEEEE
Confidence 3567899999999999999993 33322 1222334444443 46888765
No 37
>d1kcfa2 c.55.3.7 (A:39-256) Mitochondrial resolvase ydc2 catalytic domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=41.20 E-value=6.7 Score=30.58 Aligned_cols=63 Identities=13% Similarity=0.159 Sum_probs=37.5
Q ss_pred ceEEEEecCCCeEEEEEec--Cc---eeeeeeeeecc-------------ch-----hHHHHHHHHHHHcCCCEEEEeec
Q 026881 63 GFSLGVDLGLSRTGLALSK--GF---CVRPLTVLKLR-------------GE-----KLELQLLEIAQREETDEFIIGLP 119 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD--~~---~A~Pl~~i~~~-------------~~-----~~~~~L~~li~e~~i~~IVVGLP 119 (231)
.+||+||+|.|..+.++-+ .. ...-..++... .. .....+..+...+.++.|+|---
T Consensus 2 ~kIlSIDvGIkNlAyc~l~~~~~~~~~I~~W~~i~L~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~d~vlIE~Q 81 (218)
T d1kcfa2 2 SRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQ 81 (218)
T ss_dssp SSEEEEEECSTTEEEEEEEECTTSCEEEEEEEEECTTSCCTTCCCCCCCCSHHHHHHHHHHHHHHHHHHHCCSEEEEEEC
T ss_pred CeEEEEEeCccccEEEEEeeCCCCCcEEEEeeeEeecccccCcccccccCCHHHHHHHHHHHHhhhhcccCCceEEEeec
Confidence 3799999999999999865 11 12222222110 00 11223455666789999999976
Q ss_pred CCCCCC
Q 026881 120 KSWDGS 125 (231)
Q Consensus 120 l~~dGt 125 (231)
..-.|.
T Consensus 82 ~~r~~~ 87 (218)
T d1kcfa2 82 RYRSGI 87 (218)
T ss_dssp CCCTTT
T ss_pred ccccCc
Confidence 544443
No 38
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=40.94 E-value=19 Score=25.37 Aligned_cols=42 Identities=29% Similarity=0.436 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEE
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVY 152 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~ 152 (231)
.....+.+++++++||.+||| .+. -.+.-++..|++. +++++
T Consensus 53 ~d~~~i~~~a~~~~idlvviG-------PE~---pL~~Gl~D~l~~~----gI~vf 94 (105)
T d1gsoa2 53 TDIPALLDFAQNEKIDLTIVG-------PEA---PLVKGVVDTFRAA----GLKIF 94 (105)
T ss_dssp TCHHHHHHHHHHTTCSEEEEC-------SHH---HHHTTHHHHHHHT----TCCEE
T ss_pred CcHHHHHHHHHHhCcCEEEEC-------cHH---HHHhHHHHHHHHC----CCEEE
Confidence 355789999999999999999 122 2334455566553 77765
No 39
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]}
Probab=37.82 E-value=48 Score=25.58 Aligned_cols=55 Identities=11% Similarity=0.204 Sum_probs=39.7
Q ss_pred EEEEeecCCCCCCCChhHH--HHHHHHHHHHHHhccCCCcEEEe---------------cCCCcHHHHHHHHHHcCCCc
Q 026881 113 EFIIGLPKSWDGSETPQSN--KVRSVAGRLAVRAAERGWRVYLL---------------DEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 113 ~IVVGLPl~~dGt~s~~~~--~v~~Fa~~L~~~~~~~~lpV~lv---------------DER~TT~eA~~~l~e~G~~r 174 (231)
.++|+ -||..+.+. .+..+.+++++.+| +++|.+- -...|-.+|-+.|.+.|+++
T Consensus 4 illv~-----fGs~~~e~~~~~i~~i~~~v~~~~P--d~~V~~afts~~~~~~~~~~~~~~~p~~~eal~~l~~~G~~~ 75 (257)
T d1qgoa_ 4 LLVVS-----FGTSYHDTCEKNIVACERDLAASCP--DRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQD 75 (257)
T ss_dssp EEEEE-----CCCSCHHHHHHHHHHHHHHHHHTCT--TSEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHTTCCE
T ss_pred EEEEe-----CCCCchhhHHHHHHHHHHHHHHHCC--CCeEEeeehhhHHHHHHHhhcCCCCCCHHHHHHHHHhCCCCE
Confidence 47888 798776554 37889999998876 7777533 24567778888888877654
No 40
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=35.77 E-value=61 Score=22.17 Aligned_cols=68 Identities=10% Similarity=0.049 Sum_probs=42.6
Q ss_pred HHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC
Q 026881 102 LLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ 178 (231)
Q Consensus 102 L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK 178 (231)
..+.++++.++.|++.+ +|-|..+ -+|++.|++.....++||+++--..+...+.+.+ +.|...-..|
T Consensus 41 a~~~~~~~~~dlii~D~--~mP~~dG------~el~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~-~~G~~~~l~K 108 (128)
T d1jbea_ 41 ALNKLQAGGYGFVISDW--NMPNMDG------LELLKTIRADGAMSALPVLMVTAEAKKENIIAAA-QAGASGYVVK 108 (128)
T ss_dssp HHHHHTTCCCCEEEEES--CCSSSCH------HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHH-HTTCSEEEES
T ss_pred HHHHHhcCCCCEEEEec--ccccCCH------HHHHHHHHhCccCCCCcEEEEECcCCHHHHHHHH-HCCCCEEEEC
Confidence 34567778999999984 4444443 4567777654323478999887666666555554 6676544434
No 41
>d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]}
Probab=35.60 E-value=35 Score=26.72 Aligned_cols=47 Identities=6% Similarity=0.045 Sum_probs=36.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 122 ~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
.+....+..+.+.++.+.++.. ++.+++++...++..++.+..+.|.
T Consensus 188 ~~~~~eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~ia~~~~~ 234 (277)
T d1toaa_ 188 VSTASEASAHDMQELAAFIAQR----KLPAIFIESSIPHKNVEALRDAVQA 234 (277)
T ss_dssp SSCSSCCCHHHHHHHHHHHHHT----TCSEEEEETTSCTHHHHHHHHHHHT
T ss_pred cccchhhhhHHHHHHHHHHHhc----CCeEEEecCCCCcHHHHHHHHHhCC
Confidence 3334456678888898888864 8999999999999988877776554
No 42
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=35.45 E-value=29 Score=24.78 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHH-HHHHHHHHHHHHhccCCCcEEEec
Q 026881 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSN-KVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 97 ~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~-~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
.....|.+++++++++.||+|- .|. +...+ ..-.-++.+-+. ..+||..+-
T Consensus 107 ~~~~~I~~~a~~~~~dlIV~G~----~g~-~~~~~~~lGSv~~~vi~~---~~cpVlvV~ 158 (171)
T d2gm3a1 107 DPKDVICQEVKRVRPDFLVVGS----RGL-GRFQKVFVGTVSAFCVKH---AECPVMTIK 158 (171)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEE----CCC-C--------CHHHHHHHH---CSSCEEEEE
T ss_pred ChHHHHHHHHhhcCCcEEEecc----CCc-cccccCccCcHHHHHHhC---CCCCEEEEe
Confidence 3567899999999999999993 222 22111 111224444444 368888874
No 43
>d1yoba1 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelandii [TaxId: 354]}
Probab=34.55 E-value=16 Score=27.86 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHcCCCEE--------------------EEeecCCCCCCCChhHHHHHHHHHHHHHHh
Q 026881 98 LELQLLEIAQREETDEF--------------------IIGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~I--------------------VVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~ 144 (231)
....|.+.+.+.+...| .|||++..+........+|.+|+++|+..+
T Consensus 109 a~~~l~~~l~~~GA~~iG~~~~~gy~f~~s~a~~~~~f~GL~lD~dnq~~~t~~ri~~W~~~l~~e~ 175 (179)
T d1yoba1 109 ALGELYSFFKDRGAKIVGSWSTDGYEFESSEAVVDGKFVGLALDLDNQSGKTDERVAAWLAQIAPEF 175 (179)
T ss_dssp HHHHHHHHHHTTTCEEECCBCCTTCCCSCCTTBSSSSBSSEEECTTTCGGGHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHhCCCeEeeccCCCCcccccchhccCCceeeeeccccCchhhhHHHHHHHHHHHHHHh
Confidence 34567777766665544 488999888766666789999999998764
No 44
>d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
Probab=33.05 E-value=41 Score=26.45 Aligned_cols=46 Identities=4% Similarity=0.092 Sum_probs=35.4
Q ss_pred CCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 124 GSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 124 Gt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
....+..+.+.++.+.+++. +++++|++...++..|+.+-.+.|++
T Consensus 204 ~~~eps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~la~~~gv~ 249 (286)
T d1psza_ 204 TEEEGTPEQIKTLVEKLRQT----KVPSLFVESSVDDRPMKTVSQDTNIP 249 (286)
T ss_dssp TSCSSCHHHHHHHHHHHHTS----CCCCEEEETTSCSHHHHHHHHHHTCC
T ss_pred cccccChhHHHHHHHHHHhC----CceEEEEeCCCCcHHHHHHHHHcCCc
Confidence 33445668888888888753 89999999999999888877777764
No 45
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=31.83 E-value=40 Score=23.79 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=47.9
Q ss_pred EEEEecCCCeEEEEEec--Cceeeeeeeeec----------cc-------hhH---HHHHHHHHHHcCCCEE-EEeecCC
Q 026881 65 SLGVDLGLSRTGLALSK--GFCVRPLTVLKL----------RG-------EKL---ELQLLEIAQREETDEF-IIGLPKS 121 (231)
Q Consensus 65 iLglD~G~kRIGvAvsD--~~~A~Pl~~i~~----------~~-------~~~---~~~L~~li~e~~i~~I-VVGLPl~ 121 (231)
+-+||.|+--|=+.|.+ +....++..... .+ +.. ...+.+++++++++.+ +||
T Consensus 2 ~A~IDiGSNsirl~I~~~~~~~~~~l~~~~~~~rLg~~~~~~g~l~~~~i~~~~~~l~~f~~~~~~~~v~~i~~va---- 77 (124)
T d1u6za2 2 FAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVG---- 77 (124)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGGGEEEEE----
T ss_pred EEEEEEccceEEEEEEEecCCCeeEeeeeeEEeehhhhccccCCcCHHHHHHHHHHHHHHHHHHHhcCcceehhhH----
Confidence 56899999999988877 212223322211 00 111 2355566678898655 666
Q ss_pred CCCCCCh-hHHHHHHHHHHHHHHhccCCCcEEEec
Q 026881 122 WDGSETP-QSNKVRSVAGRLAVRAAERGWRVYLLD 155 (231)
Q Consensus 122 ~dGt~s~-~~~~v~~Fa~~L~~~~~~~~lpV~lvD 155 (231)
|..- .+.--..|.+++++. +++++...+
T Consensus 78 ---TsA~R~A~N~~~~~~~i~~~---~gi~i~ils 106 (124)
T d1u6za2 78 ---THTLRQALNATDFLKRAEKV---IPYPIEIIS 106 (124)
T ss_dssp ---CHHHHHCTTHHHHHHHHTTT---CSSCEEECC
T ss_pred ---HHHHHcCccHHHHHHHHHHH---hCCCEEEeC
Confidence 2211 123346788888875 589998876
No 46
>d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.49 E-value=94 Score=23.00 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
....++-+...-++..|+|.+ =|....--..++-+++.+++.- .++||+.-=+---..+++++|.+.|++
T Consensus 60 v~~al~lil~d~~vk~IlINi----fGGI~rcd~vA~GIv~A~k~~~--~~iPiVVRl~Gtn~eeg~~iL~~~gl~ 129 (150)
T d2nu7b1 60 VTEAFKIILSDDKVKAVLVNI----FGGIVRCDLIADGIIGAVAEVG--VNVPVVVRLEGNNAELGAKKLADSGLN 129 (150)
T ss_dssp HHHHHHHHHTSTTCCEEEEEE----ESCSSCHHHHHHHHHHHHHHHT--CCSCEEEEEESTTHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCCCCEEEEEE----eeeeehhHHHHHHHHHHHHhcC--CCCcEEEEecCCCHHHHHHHHHHCCCC
Confidence 344555566678999999974 4666655555666666666542 588988776767778999999998875
No 47
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]}
Probab=31.04 E-value=12 Score=25.35 Aligned_cols=22 Identities=5% Similarity=0.074 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHcCCCEEEEe
Q 026881 96 EKLELQLLEIAQREETDEFIIG 117 (231)
Q Consensus 96 ~~~~~~L~~li~e~~i~~IVVG 117 (231)
....+.|.++++++++|.||+|
T Consensus 95 G~~~~~I~~~a~~~~~DLIV~G 116 (138)
T d1q77a_ 95 GPLSEEVKKFVEGKGYELVVWA 116 (138)
T ss_dssp SCHHHHHHHHHTTSCCSEEEEC
T ss_pred chhHHHHHHhhhhccCCEEEEe
Confidence 3466789999999999999999
No 48
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}
Probab=30.93 E-value=71 Score=23.68 Aligned_cols=51 Identities=10% Similarity=0.120 Sum_probs=37.7
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
..++.+++++-++..+|+. +.+- .-....+++.+++++.++ +++|++.|+.
T Consensus 225 ~~e~~~la~~~~~k~lvlt---H~s~---ry~~~~~~~~~~~~~~~p--~~~i~~~~~~ 275 (280)
T d2e7ya1 225 IDEVMESVKAAGVKKVILY---HIST---RYIRQLKSVIKKYREEMP--DVEILYMDPR 275 (280)
T ss_dssp HHHHHHHHHHHTCCEEEEE---SCCG---GGHHHHHHHHHHHHHHCT--TSEEEECCTT
T ss_pred HHHHHHHHHHcCCCEEEEE---ecCc---ccCccHHHHHHHHHHhCC--CCEEEECCCC
Confidence 4578889999999999987 4331 113566778888888775 8999888864
No 49
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=30.61 E-value=42 Score=25.57 Aligned_cols=59 Identities=14% Similarity=0.080 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCC--CCCChhHHHHHHHHHHHHHHhccCCCcEEEecC
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWD--GSETPQSNKVRSVAGRLAVRAAERGWRVYLLDE 156 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~d--Gt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE 156 (231)
....+...+..++++.|||=.--.+. +..+.....+.+++..|+....+++++|+++-.
T Consensus 135 ~~~~~~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~vi~~~q 195 (277)
T d1cr2a_ 135 LLAKLAYMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICH 195 (277)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEEEC----------CHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHhhhhhhccCcceEEEcccccccccccccchhHHHHHHHHHHHHHhhhccccceeecc
Confidence 34556667778899999987543332 222223345566666666554456999988753
No 50
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=30.47 E-value=80 Score=21.85 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=41.2
Q ss_pred HHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC
Q 026881 102 LLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ 178 (231)
Q Consensus 102 L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK 178 (231)
-.+++.+..++.|++.+ +|.|..+ -.+++.++... .++||+++--+-+...+.+.+ +.|..--..|
T Consensus 36 Al~~l~~~~~dlvilD~--~mp~~~G------~e~~~~lr~~~--~~~piI~lT~~~~~~~~~~a~-~~Ga~dyl~K 101 (137)
T d1ny5a1 36 AYKLLSEKHFNVVLLDL--LLPDVNG------LEILKWIKERS--PETEVIVITGHGTIKTAVEAM-KMGAYDFLTK 101 (137)
T ss_dssp HHHHHHHSCCSEEEEES--BCSSSBH------HHHHHHHHHHC--TTSEEEEEEETTCHHHHHHHH-TTTCCEEEEE
T ss_pred HHHHhhccccccchHHH--hhhhhhH------HHHHHHHHHhC--CCCCEEEEECCCCHHHHHHHH-HcCCCEEEeC
Confidence 34455678999999994 4545444 34566666654 379999887666655555544 4565443333
No 51
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]}
Probab=30.42 E-value=31 Score=25.79 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=24.6
Q ss_pred EEeecCCCCCCCChhHHHHHHHHHHHHHHh
Q 026881 115 IIGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (231)
Q Consensus 115 VVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~ 144 (231)
.|||++..+........+|.+|+++|+..+
T Consensus 142 f~gL~lD~dn~~~~t~~ri~~W~~~l~~e~ 171 (173)
T d2fcra_ 142 FLGLPLDMVNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp ESSEEEETTTCSSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHh
Confidence 478999887777777788999999998764
No 52
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=29.94 E-value=5.2 Score=29.84 Aligned_cols=13 Identities=15% Similarity=-0.061 Sum_probs=9.9
Q ss_pred ceEEEEecCCCeE
Q 026881 63 GFSLGVDLGLSRT 75 (231)
Q Consensus 63 g~iLglD~G~kRI 75 (231)
++|+-||||.+.+
T Consensus 1 mmI~iiD~g~~~~ 13 (188)
T d1wl8a1 1 MMIVIMDNGGQYV 13 (188)
T ss_dssp CEEEEEECSCTTH
T ss_pred CEEEEEECCCcHH
Confidence 3789999997643
No 53
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=29.89 E-value=65 Score=22.51 Aligned_cols=76 Identities=12% Similarity=0.049 Sum_probs=46.3
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-C
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ-T 179 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK-~ 179 (231)
+..+++++..++.|++- +.|.|..| ..+.++|++.. .++||+++--+-+...+.+.+. .|...--.| -
T Consensus 35 ~al~~l~~~~~dlil~D--~~mP~~~G------~el~~~lr~~~--~~~pvI~lT~~~~~~~~~~a~~-~Ga~dyl~KP~ 103 (140)
T d1qkka_ 35 EALAGLSADFAGIVISD--IRMPGMDG------LALFRKILALD--PDLPMILVTGHGDIPMAVQAIQ-DGAYDFIAKPF 103 (140)
T ss_dssp HHHHTCCTTCCSEEEEE--SCCSSSCH------HHHHHHHHHHC--TTSCEEEEECGGGHHHHHHHHH-TTCCEEEESSC
T ss_pred HHHHHHhccCcchHHHh--hccCCCCH------HHHHHHHHHhC--CCCcEEEEECCCCHHHHHHHHH-cCCCEeecCCC
Confidence 34455567899999998 44555444 34666777654 3799999987666666666654 455433333 2
Q ss_pred CCcHHHHH
Q 026881 180 KTDAYAAV 187 (231)
Q Consensus 180 ~vD~lAA~ 187 (231)
..+.+.+.
T Consensus 104 ~~~~L~~~ 111 (140)
T d1qkka_ 104 AADRLVQS 111 (140)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 23444443
No 54
>d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=29.18 E-value=94 Score=22.98 Aligned_cols=70 Identities=10% Similarity=0.051 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
..+.++-+....++..|+|.+ =|....--.-++-+++.+++.- ..+||+.-=+---..+++++|.+.|++
T Consensus 60 v~~al~iil~d~~Vk~IlINI----fGGI~rcD~vA~GIv~A~~e~~--~~iPiVVRL~Gtn~eeg~~iL~~sgl~ 129 (148)
T d1eucb1 60 VYQAFKLLTADPKVEAILVNI----FGGIVNCAIIANGITKACRELE--LKVPLVVRLEGTNVHEAQNILTNSGLP 129 (148)
T ss_dssp HHHHHHHTTSCTTCCEEEEEE----ECSSSCHHHHHHHHHHHHHHHT--CCSCEEEEEESTTHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHCCCCccEEEEEe----eEeehhHHHHHHHHHHHHHhcC--CCccEEEEeccCChHHHHHHHHHCCCC
Confidence 344555566677899998864 4666555555566666666542 478988766666689999999988874
No 55
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.00 E-value=12 Score=29.49 Aligned_cols=46 Identities=15% Similarity=0.222 Sum_probs=26.4
Q ss_pred ceEEEEecCCCeEEEEEecCceee--eeeeeeccchhHHHHHHHHHHHcCCCEEEEe
Q 026881 63 GFSLGVDLGLSRTGLALSKGFCVR--PLTVLKLRGEKLELQLLEIAQREETDEFIIG 117 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD~~~A~--Pl~~i~~~~~~~~~~L~~li~e~~i~~IVVG 117 (231)
-+|+.||+|.|.- +...+... -..+++.+. ..++ +.+.++++||+.
T Consensus 40 ~~i~~~D~G~k~~---ilr~l~~~~~~~~v~p~~~--~~~~----i~~~~pdgivlS 87 (228)
T d1a9xb2 40 FHVVAYDFGAKRN---ILRMLVDRGCRLTIVPAQT--SAED----VLKMNPDGIFLS 87 (228)
T ss_dssp EEEEEEESSCCHH---HHHHHHHTTEEEEEEETTC--CHHH----HHTTCCSEEEEC
T ss_pred ceEEEEeCCCcHH---hHhHHHhcCceEEEcCCCC--CHHH----HHhcCCCEEEEe
Confidence 4799999999976 22322111 124444321 1122 344799999998
No 56
>d2p3ra1 c.55.1.4 (A:2-253) Glycerol kinase {Escherichia coli [TaxId: 562]}
Probab=28.53 E-value=20 Score=27.89 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=17.6
Q ss_pred ceEEEEecCCCeEEEEEec
Q 026881 63 GFSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 63 g~iLglD~G~kRIGvAvsD 81 (231)
..+||||+|+..|=+++-|
T Consensus 3 ky~lgiDiGTssvKa~l~d 21 (252)
T d2p3ra1 3 KYIVALDQGTTSSRAVVMD 21 (252)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecccceeeeEEe
Confidence 4799999999999999988
No 57
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=27.90 E-value=42 Score=26.39 Aligned_cols=45 Identities=7% Similarity=0.066 Sum_probs=35.6
Q ss_pred CCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 124 GSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 124 Gt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
....+..+.+.++.+.+++. ++.+++++...++..++.+-.+.|.
T Consensus 194 ~~~~ps~~~l~~l~~~ik~~----~v~~if~e~~~~~~~~~~ia~~~~~ 238 (279)
T d1xvla1 194 AEQQFTPKQVQTVIEEVKTN----NVPTIFCESTVSDKGQKQVAQATGA 238 (279)
T ss_dssp SSCSCCHHHHHHHHHHHHTT----TCSEEEEETTSCSHHHHHHHTTTCC
T ss_pred CcccCCHHHHHHHHHHHHhc----CccEEEecCCCChHHHHHHHHHhCC
Confidence 34456678888888888764 8999999999999988877666664
No 58
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=26.98 E-value=83 Score=23.63 Aligned_cols=53 Identities=19% Similarity=0.208 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe
Q 026881 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL 154 (231)
Q Consensus 99 ~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv 154 (231)
++++.+.+.+.++|.||+.==+-.++..+ ...+..+.+.+... ...++||+++
T Consensus 29 l~~iv~~a~~~~~D~vli~GDlfd~~~~~--~~~~~~~~~~~~~l-~~~~i~v~~i 81 (333)
T d1ii7a_ 29 FKNALEIAVQENVDFILIAGDLFHSSRPS--PGTLKKAIALLQIP-KEHSIPVFAI 81 (333)
T ss_dssp HHHHHHHHHHTTCSEEEEESCSBSSSSCC--HHHHHHHHHHHHHH-HTTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCC--HHHHHHHHHHHhhH-HhcCCcEEEe
Confidence 45666667789999776652121123322 22333344444322 2358999886
No 59
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 1163]}
Probab=26.37 E-value=19 Score=26.60 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=24.2
Q ss_pred EEEeecCCCCCCCChhHHHHHHHHHHHHHHh
Q 026881 114 FIIGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (231)
Q Consensus 114 IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~ 144 (231)
-.||+|+..+......-.+|.+|+++|+..+
T Consensus 137 ~fiGl~lD~d~~~e~t~eri~~Wv~~i~~e~ 167 (169)
T d1oboa_ 137 KFVGLALDEDNQSDLTDDRIKSWVAQLKSEF 167 (169)
T ss_dssp EESSEEECTTTCGGGHHHHHHHHHHHHHHHH
T ss_pred eEEecCcCccCcccccHHHHHHHHHHHHHHh
Confidence 3469999877766555688999999998764
No 60
>d1czna_ c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus PCC 7942 [TaxId: 1140]}
Probab=26.02 E-value=19 Score=26.94 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=25.5
Q ss_pred EEEeecCCCCCCCChhHHHHHHHHHHHHHHh
Q 026881 114 FIIGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (231)
Q Consensus 114 IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~ 144 (231)
-.||||+..+........++.+|+++|+..|
T Consensus 137 ~f~GL~lD~d~~~~~t~~ri~~W~~~l~~e~ 167 (169)
T d1czna_ 137 QFVGLAIDEDNQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp EESSEEECTTTCGGGHHHHHHHHHHHHHHHT
T ss_pred eEEeeeccccCchhhhHHHHHHHHHHHHHHh
Confidence 3579999988877777788999999998764
No 61
>d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=25.91 E-value=40 Score=26.74 Aligned_cols=46 Identities=9% Similarity=0.230 Sum_probs=35.7
Q ss_pred CCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 123 dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
.|.+ +..+.+.++.+.+++. ++.++|+++..++..|+.+-.+.|++
T Consensus 217 ~~~e-ps~~~l~~l~~~ik~~----~i~~if~e~q~~~~~~~~la~~~gv~ 262 (289)
T d1pq4a_ 217 EGQE-PSAQELKQLIDTAKEN----NLTMVFGETQFSTKSSEAIAAEIGAG 262 (289)
T ss_dssp TTBC-CCHHHHHHHHHHHHTT----TCCEEEEETTSCCHHHHHHHHHHTCE
T ss_pred cCCC-CCHHHHHHHHHHHHHc----CCCEEEEcCCCCcHHHHHHHHHcCCC
Confidence 3443 5678888888888764 89999999999999888777776763
No 62
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=25.71 E-value=1.1e+02 Score=21.76 Aligned_cols=96 Identities=10% Similarity=0.118 Sum_probs=57.3
Q ss_pred eeeeeeeccchhHHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe----cCCCcHH
Q 026881 86 RPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL----DEHRTSA 161 (231)
Q Consensus 86 ~Pl~~i~~~~~~~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv----DER~TT~ 161 (231)
....++..-.....+.+.+.+.+++++.|.+- .+.+.....++++.+.|++... .+++|+.= .....-.
T Consensus 30 ~G~~V~~LG~~~p~e~iv~a~~~~~~d~v~lS------~~~~~~~~~~~~~~~~l~~~~~-~~i~iivGG~~~~~~~~~~ 102 (137)
T d1ccwa_ 30 AGFNVVNIGVLSPQELFIKAAIETKADAILVS------SLYGQGEIDCKGLRQKCDEAGL-EGILLYVGGNIVVGKQHWP 102 (137)
T ss_dssp TTCEEEEEEEEECHHHHHHHHHHHTCSEEEEE------ECSSTHHHHHTTHHHHHHHTTC-TTCEEEEEESCSSSSCCHH
T ss_pred CCCeEEecccccCHHHHHHHHHhcCCCEEEEe------eccccchHHHHHHHHHHHHhcc-CCCEEEEeCCcCCCccccH
Confidence 34455533222345678888889999987775 3334456778888888876532 36776532 2223334
Q ss_pred HHHHHHHHcCCCccc-cCCCCcHHHHHH
Q 026881 162 EAVDRMINMGLSKSA-RQTKTDAYAAVI 188 (231)
Q Consensus 162 eA~~~l~e~G~~rkk-rK~~vD~lAA~I 188 (231)
.....|++.|+.+-- +-...|.+++++
T Consensus 103 ~~~~~l~~~Gv~~if~~~t~~~~~~~~l 130 (137)
T d1ccwa_ 103 DVEKRFKDMGYDRVYAPGTPPEVGIADL 130 (137)
T ss_dssp HHHHHHHHTTCSEECCTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEECCCCCHHHHHHHH
Confidence 455577888876532 334566666554
No 63
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.55 E-value=77 Score=24.83 Aligned_cols=53 Identities=11% Similarity=0.098 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
...++.+..++.+++.+.|..|.....+. ..+.+|.+.+.+. .++||+++|--
T Consensus 90 ~~i~~a~~a~~~Gad~v~i~~P~~~~~~~----~~l~~~~~~v~~~---~~~pi~lYn~p 142 (296)
T d1xxxa1 90 HSIRLAKACAAEGAHGLLVVTPYYSKPPQ----RGLQAHFTAVADA---TELPMLLYDIP 142 (296)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSSCCCH----HHHHHHHHHHHTT---CSSCEEEEECH
T ss_pred HHHHHHHHHHHhcCCeEEEEeccCCCCCH----HHHHHHHHHHHHh---cCCCEEEEECc
Confidence 34577788889999999999998765443 4566777777765 47999888643
No 64
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=25.32 E-value=50 Score=24.14 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=24.2
Q ss_pred cCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEe
Q 026881 109 EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLL 154 (231)
Q Consensus 109 ~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lv 154 (231)
.+++.||+|..- .......+..+.|+..++..+...++||.+.
T Consensus 153 ~~p~riv~G~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~m 195 (196)
T d1dlja2 153 LYPSRIIVSCEE---NDSPKVKADAEKFALLLKSAAKKNNVPVLIM 195 (196)
T ss_dssp HSCSCEEEECCT---TSCHHHHHHHHHHHHHHHHHCSCSCCCEEEE
T ss_pred cCCCEEEEeCCH---hhHHHHHHHHHHHHHHHHhhhccCCCCEEee
Confidence 478889999321 1112223345566666665544457788753
No 65
>d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]}
Probab=24.39 E-value=95 Score=20.75 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=40.4
Q ss_pred eEEEEecCCCeEEEEEec-Cc-eeeeeeeeecc----c-hhHHHHHHHH----HH--HcCCCEEEEeecCCCCCCCChhH
Q 026881 64 FSLGVDLGLSRTGLALSK-GF-CVRPLTVLKLR----G-EKLELQLLEI----AQ--REETDEFIIGLPKSWDGSETPQS 130 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD-~~-~A~Pl~~i~~~----~-~~~~~~L~~l----i~--e~~i~~IVVGLPl~~dGt~s~~~ 130 (231)
|+|++|=|..|+=..+.| +. +.. ..+-..| + +.....|.+. +. ..+++.+.+|+ .|-.++..
T Consensus 1 MilivDgGgTKT~~vl~d~g~~i~~-~~t~g~Np~~~~~~~~~~~l~~~~~~~l~~~~~~i~~i~~g~----AG~~~~~~ 75 (107)
T d1zbsa2 1 MILIGDSGSTKTDWCIAKEGKSLGR-FQTSGINPFQQDRNEIDTALRSEVLPAIGQKASSIRAVYFYG----AGCTPAKA 75 (107)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEE-EEEECCCTTTSCHHHHHHHHTTTTHHHHTTSTTTCCEEEEEE----TTCCTTTH
T ss_pred CEEEEEeccccEEEEEECCCCeEEE-EecCCcCcccCCHHHHHHHHHHHHHHHHhccccCCcEEEEEe----cCCCchhh
Confidence 689999999999988887 32 221 2222211 1 2222333321 11 35799999996 45444433
Q ss_pred HHHHHHHHHHHHHhc
Q 026881 131 NKVRSVAGRLAVRAA 145 (231)
Q Consensus 131 ~~v~~Fa~~L~~~~~ 145 (231)
+. ..+.|.+.++
T Consensus 76 ~~---i~~~l~~~~~ 87 (107)
T d1zbsa2 76 PM---LNEALDSMLP 87 (107)
T ss_dssp HH---HHHHHHHHST
T ss_pred HH---HHHHHHHHCC
Confidence 33 3445665553
No 66
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]}
Probab=24.23 E-value=46 Score=26.45 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=43.7
Q ss_pred eccchhHHHHHHHHHHHcCCCEEEEeecCCC------CCCC-C-hhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHH
Q 026881 92 KLRGEKLELQLLEIAQREETDEFIIGLPKSW------DGSE-T-PQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEA 163 (231)
Q Consensus 92 ~~~~~~~~~~L~~li~e~~i~~IVVGLPl~~------dGt~-s-~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA 163 (231)
...+.+..+.|.+|+.-.+||.|.|| |.++ .|.. + +..+.+++.++..+ +.+.++-.+ -.|..++
T Consensus 148 ~IEt~~av~nleeI~av~giD~i~iG-p~DLs~slG~~g~~~~p~v~~ai~~v~~~~~----~~gk~~g~~--~~~~~~~ 220 (253)
T d1dxea_ 148 QIESQQGVDNVDAIAATEGVDGIFVG-PSDLAAALGHLGNASHPDVQKAIQHIFNRAS----AHGKPSGIL--APVEADA 220 (253)
T ss_dssp EECSHHHHHTHHHHHTSTTCCEEEEC-HHHHHHHTTCTTCTTSHHHHHHHHHHHHHHH----HTTCCEEEE--CCSHHHH
T ss_pred ecccHHHHHHHHHHhccCCCceEEEe-cCcHHhhccCCCCCCChhHHHHHHHHHHHHH----HcCCCeEEe--cCCHHHH
Confidence 33455677889999999999999999 5322 1222 2 22233334444433 358887554 2455555
Q ss_pred HHHHHHcCCC
Q 026881 164 VDRMINMGLS 173 (231)
Q Consensus 164 ~~~l~e~G~~ 173 (231)
+ .+.+.|.+
T Consensus 221 ~-~~~~~G~~ 229 (253)
T d1dxea_ 221 R-RYLEWGAT 229 (253)
T ss_dssp H-HHHHTTCC
T ss_pred H-HHHHcCCC
Confidence 5 45577754
No 67
>d1ewqa3 c.55.6.1 (A:121-266) DNA repair protein MutS, domain II {Thermus aquaticus [TaxId: 271]}
Probab=22.75 E-value=1.2e+02 Score=21.14 Aligned_cols=50 Identities=20% Similarity=0.171 Sum_probs=32.7
Q ss_pred CceEEEEecCCCeEEEEEecCcee-eeeeeeeccchhHHHHHHHHHHHcCCCEEEEe
Q 026881 62 GGFSLGVDLGLSRTGLALSKGFCV-RPLTVLKLRGEKLELQLLEIAQREETDEFIIG 117 (231)
Q Consensus 62 ~g~iLglD~G~kRIGvAvsD~~~A-~Pl~~i~~~~~~~~~~L~~li~e~~i~~IVVG 117 (231)
...++||=.|. .+|+|.+|-.+. .-+..+ .+ ...+...+...+|..||+-
T Consensus 11 nNyLaai~~~~-~~giA~~DiSTGef~~~~~--~~---~~~l~~~l~r~~P~Eil~~ 61 (146)
T d1ewqa3 11 ANYLAAIATGD-GWGLAFLDVSTGEFKGTVL--KS---KSALYDELFRHRPAEVLLA 61 (146)
T ss_dssp CCCEEEEEESS-SEEEEEEETTTTEEEEEEE--SS---HHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEEEECC-CeEEEEEEccCCeEEEEEe--cc---hhhHHHHHHcCCCcEEEEC
Confidence 35788887765 699999993211 111122 11 2456677788999999988
No 68
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=22.28 E-value=1.1e+02 Score=20.50 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccC-C
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQ-T 179 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK-~ 179 (231)
+-.+.++++.++.||+.+ +|.|..+ -++++.+++. ..+||+++--..+...+.+. .+.|..--..| -
T Consensus 35 eal~~~~~~~~dlillD~--~mp~~~G------~~~~~~i~~~---~~~pvI~lt~~~~~~~~~~a-~~~Ga~d~l~KP~ 102 (117)
T d2a9pa1 35 EALEQFEAEQPDIIILDL--MLPEIDG------LEVAKTIRKT---SSVPILMLSAKDSEFDKVIG-LELGADDYVTKPF 102 (117)
T ss_dssp HHHHHHHHHCCSEEEECS--SCSSSCH------HHHHHHHHTT---CCCCEEEEESCCSHHHHHHH-HHHTCSEEEESSC
T ss_pred HHHHHHHhcCCCEEEecc--ccCCCCc------cHHHHHHHhC---CCCCEEEEecCCCHHHHHHH-HHcCCCEEEECCC
Confidence 334455678999999995 4555444 2355566543 37899888766666555443 45565443333 2
Q ss_pred CCcHHHHH
Q 026881 180 KTDAYAAV 187 (231)
Q Consensus 180 ~vD~lAA~ 187 (231)
..+.+.|.
T Consensus 103 ~~~~L~~~ 110 (117)
T d2a9pa1 103 SNRELQAR 110 (117)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 23444444
No 69
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}
Probab=22.13 E-value=62 Score=25.48 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCc
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRT 159 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~T 159 (231)
..+.+.+.+.+.++..||+-.|-|+-|..-.. ...+++++..++ +++.| ++||-|+
T Consensus 121 d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~-~~~~~i~~~~~~----~~~~l-I~De~y~ 176 (361)
T d1d2fa_ 121 DMGKLEAVLAKPECKIMLLCSPQNPTGKVWTC-DELEIMADLCER----HGVRV-ISDEIHM 176 (361)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSCTTTCCCCCT-THHHHHHHHHHH----TTCEE-EEECTTT
T ss_pred ccccchhhcccCCceeEEecccccccccccch-hhhhhhhhhhhh----hheee-eeccccc
Confidence 45677777777889999999999998865433 234455555543 36655 4788776
No 70
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}
Probab=22.11 E-value=1.4e+02 Score=21.70 Aligned_cols=18 Identities=17% Similarity=0.161 Sum_probs=14.7
Q ss_pred eEEEEecCCCeEEEEEec
Q 026881 64 FSLGVDLGLSRTGLALSK 81 (231)
Q Consensus 64 ~iLglD~G~kRIGvAvsD 81 (231)
.+.|||.|+.+|=.++..
T Consensus 3 ~~~aiDIGs~kI~~~v~~ 20 (193)
T d1e4ft1 3 FYTSIDIGSRYIKGLVLG 20 (193)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEcCCCEEEEEEEE
Confidence 578999999999666654
No 71
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=21.27 E-value=1.1e+02 Score=20.46 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=46.4
Q ss_pred HHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCccccCCCCc
Q 026881 103 LEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182 (231)
Q Consensus 103 ~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~rkkrK~~vD 182 (231)
.++++++.++.|++. ++|.|..| -++++++++.. .++||+++-=+-+...+.+ ..+.|...-..| ++|
T Consensus 38 l~~~~~~~~dlillD--~~mP~~~G------~el~~~lr~~~--~~~pvi~lt~~~~~~~~~~-a~~~Ga~~yl~K-P~~ 105 (119)
T d1peya_ 38 LDIVTKERPDLVLLD--MKIPGMDG------IEILKRMKVID--ENIRVIIMTAYGELDMIQE-SKELGALTHFAK-PFD 105 (119)
T ss_dssp HHHHHHHCCSEEEEE--SCCTTCCH------HHHHHHHHHHC--TTCEEEEEESSCCHHHHHH-HHHTTCCEEEES-SCC
T ss_pred HHHHHhCCCCEEEEe--ccCCCCCH------HHHHHHHHHhC--CCCcEEEEecCCCHHHHHH-HHHCCCCEEEEC-CCC
Confidence 345667899999998 45556554 34566676653 3799998865444444443 345665443333 344
Q ss_pred HHHHHHHHHHHH
Q 026881 183 AYAAVILLERYF 194 (231)
Q Consensus 183 ~lAA~IILq~yL 194 (231)
.-.=.-.+++||
T Consensus 106 ~~~L~~~v~~~L 117 (119)
T d1peya_ 106 IDEIRDAVKKYL 117 (119)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHC
Confidence 433333345554
No 72
>d2q4qa1 c.103.1.1 (A:2-122) Hypothetical protein PTD015 (C11orf67) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.05 E-value=1.1e+02 Score=21.53 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCCh--hHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHH
Q 026881 100 LQLLEIAQREETDEFIIGLPKSWDGSETP--QSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMI 168 (231)
Q Consensus 100 ~~L~~li~e~~i~~IVVGLPl~~dGt~s~--~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~ 168 (231)
..|.++++ .+++.|||| -|..+. ....+++| |++ .++.|.. ++|.+|-+.|.
T Consensus 51 ~~l~~~l~-~~peilliG-----tG~~~~~~l~~~~~~~---l~~----~gi~ve~----m~T~~AcrtyN 104 (121)
T d2q4qa1 51 ADVKEVVE-KGVQTLVIG-----RGMSEALKVPSSTVEY---LKK----HGIDVRV----LQTEQAVKEYN 104 (121)
T ss_dssp HHHHHHHT-TCCSEEEEE-----CCSSCCSCCCHHHHHH---HHT----TTCEEEE----ECHHHHHHHHH
T ss_pred HHHHHHhc-cCCCEEEEc-----CCCCcccCCCHHHHHH---HHH----cCCceEE----eCHHHHHHHHH
Confidence 45777664 699999999 675432 23344333 544 3777755 47888877654
No 73
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.98 E-value=1.1e+02 Score=20.39 Aligned_cols=59 Identities=15% Similarity=0.182 Sum_probs=34.7
Q ss_pred HHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCC
Q 026881 103 LEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLS 173 (231)
Q Consensus 103 ~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~ 173 (231)
.++++++.++.|++.+=+ .|..+ -++++.+++. ...||+++=-..+...+.+.+ +.|..
T Consensus 37 l~~l~~~~~dliilD~~m--P~~~G------~e~~~~ir~~---~~~piI~lt~~~~~~~~~~a~-~~Ga~ 95 (119)
T d1zh2a1 37 LLEAATRKPDLIILDLGL--PDGDG------IEFIRDLRQW---SAVPVIVLSARSEESDKIAAL-DAGAD 95 (119)
T ss_dssp HHHHHHHCCSEEEEESEE--TTEEH------HHHHHHHHTT---CCCCEEEEESCCSHHHHHHHH-HHTCS
T ss_pred HHHHHhcCCCEEEecccc--CCCCC------chHHHHHHhc---cCCcEEEEeccCCHHHHHHHH-HcCCC
Confidence 445566899999998543 33333 2355666543 367888876555555444444 44543
No 74
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.62 E-value=94 Score=21.08 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCC
Q 026881 101 QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGL 172 (231)
Q Consensus 101 ~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~ 172 (231)
.+.+++.+++++.||++ ..++. ..+.|+.. ++.|+..+ ..|-.+|-+.+.+.-+
T Consensus 56 ~~~~~l~~~~vd~vi~~-------~iG~~------~~~~L~~~----GI~v~~~~-~~~v~eal~~~~~g~L 109 (124)
T d1eo1a_ 56 RTAQIIANNGVKAVIAS-------SPGPN------AFEVLNEL----GIKIYRAT-GTSVEENLKLFTEGNL 109 (124)
T ss_dssp THHHHHHHTTCCEEEEC-------CSSHH------HHHHHHHH----TCEEEECC-SCCHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEC-------CCCHH------HHHHHHHC----CCEEEEcC-CCCHHHHHHHHHhCCC
Confidence 45666677899999998 13432 23456654 88888654 4677888887776544
No 75
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=20.60 E-value=1.4e+02 Score=23.01 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecC------CCcHHHHHHHHHH
Q 026881 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDE------HRTSAEAVDRMIN 169 (231)
Q Consensus 98 ~~~~L~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDE------R~TT~eA~~~l~e 169 (231)
..-++.+..++.+++++.|.-|.....+ ...+.+|.+.+.+. .++||.+++- .+|...-.+++.+
T Consensus 84 ~ai~~a~~A~~~Gad~v~v~pP~y~~~s----~~~i~~~~~~ia~a---~~~pi~iYn~P~~~g~~~~~~~~~~l~~~ 154 (295)
T d1o5ka_ 84 KTLKLVKQAEKLGANGVLVVTPYYNKPT----QEGLYQHYKYISER---TDLGIVVYNVPGRTGVNVLPETAARIAAD 154 (295)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSSCCC----HHHHHHHHHHHHTT---CSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCCCC----HHHHHHHHHHHHhc---cCCCeeEEeccchhcccchhHHHHHHHhh
Confidence 3356778888999999999988754332 24567777778765 4799988873 3444444444443
No 76
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=20.44 E-value=1.3e+02 Score=20.72 Aligned_cols=63 Identities=19% Similarity=0.292 Sum_probs=40.1
Q ss_pred HHHHHHcCCCEEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCCCcHHHHHHHHHHcCCCc
Q 026881 103 LEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174 (231)
Q Consensus 103 ~~li~e~~i~~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER~TT~eA~~~l~e~G~~r 174 (231)
.++++++.++.|++.+ .|.|..+ ..+++.++.......+||+++-..-+...+.+.+ +.|..-
T Consensus 38 l~~~~~~~~dlil~D~--~~p~~~G------~~~~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~-~~Ga~d 100 (139)
T d1w25a1 38 LAMAARDLPDIILLDV--MMPGMDG------FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGL-ESGASD 100 (139)
T ss_dssp HHHHHHHCCSEEEEES--CCSSSCH------HHHHHHHHHSTTTTTSCEEEEECSSCHHHHHHHH-HHTCCE
T ss_pred hhhhhcccceeeeeec--cccCCCc------hHHHHHhhhcccccCCCEEEEEcCCCHHHHHHHH-HcCCCE
Confidence 3456678999999995 4445444 3344555543222478999998777777766555 456543
No 77
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=20.07 E-value=21 Score=24.55 Aligned_cols=30 Identities=27% Similarity=0.241 Sum_probs=18.5
Q ss_pred EEEEeecCCCCCCCChhHHHHHHHHHHHHHHhccCCCcEEEecCC
Q 026881 113 EFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEH 157 (231)
Q Consensus 113 ~IVVGLPl~~dGt~s~~~~~v~~Fa~~L~~~~~~~~lpV~lvDER 157 (231)
.+|+| -|..+ +..++.|.+. +.+|+.+|..
T Consensus 3 ~iIiG-----~G~~G------~~la~~L~~~----g~~vvvid~d 32 (134)
T d2hmva1 3 FAVIG-----LGRFG------GSIVKELHRM----GHEVLAVDIN 32 (134)
T ss_dssp EEEEC-----CSHHH------HHHHHHHHHT----TCCCEEEESC
T ss_pred EEEEC-----CCHHH------HHHHHHHHHC----CCeEEEecCc
Confidence 46777 45443 4456666653 7788888764
Done!