BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026882
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1
Length = 149
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 1 MLGVFSSAIVSPPEELV--AAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYT 58
ML VF +I PP EL AG + KT + + F + + + +A++
Sbjct: 1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREE-IAESFKTWKQDSTFYHLFNGNFMAFS 59
Query: 59 HQNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAP 118
H NE+PL+ RS V D++FC+F GALDN LR+ YGL++ A E ++++EAYK LRDRAP
Sbjct: 60 HGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAP 119
Query: 119 YPPNHVVGHLSGYFAFIVYDKSTSTLFVA 147
YPP+ V+ L G FAFI++D STLF+A
Sbjct: 120 YPPDQVIKELEGKFAFILFDSKASTLFLA 148
>sp|Q10MX3|ASNS1_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa
subsp. japonica GN=Os03g0291500 PE=2 SV=1
Length = 604
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G FAF++YD T T A PLY G +DG V + + L C +
Sbjct: 115 VDMLDGVFAFVLYDTRTKTYMAARDAIGVNPLYIGRGSDGAVWISSEMKALNEDCVE-FE 173
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPA 209
FP G +S+A GGLR + P+ VPA
Sbjct: 174 IFPPGHLYSSAAGGLRRWYKPQWFAENVPA 203
>sp|Q43011|ASNS2_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa
subsp. japonica GN=Os06g0265000 PE=2 SV=3
Length = 591
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G FAF++ D + A PLY G DG V F+ + L C + +
Sbjct: 114 VDMLDGMFAFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCERFI- 172
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPA 209
SFP G +S+ GGLR + NP ++P+
Sbjct: 173 SFPPGHLYSSKTGGLRRWYNPPWFSESIPS 202
>sp|Q9LV77|ASNS2_ARATH Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis
thaliana GN=ASN2 PE=2 SV=1
Length = 578
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
+ L G FAF++ D + A PLY G DG V FA + L C +
Sbjct: 114 IDMLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDC-EQFM 172
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPA 209
SFP G +S+ GGLR + NP VP+
Sbjct: 173 SFPPGHIYSSKQGGLRRWYNPPWYNEQVPS 202
>sp|P49094|ASNS_MAIZE Asparagine synthetase [glutamine-hydrolyzing] OS=Zea mays GN=ASN1
PE=2 SV=2
Length = 586
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G F+F++ D + A PLY G DG V F+ + L C +
Sbjct: 114 VDMLDGMFSFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCER-FI 172
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPA 209
+FP G +S+ GGLR + NP VP+
Sbjct: 173 TFPPGHLYSSKTGGLRRWYNPPWFSETVPS 202
>sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine-hydrolyzing] 3 OS=Arabidopsis
thaliana GN=ASN3 PE=2 SV=1
Length = 578
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G FAF++ D + A PLY G DG V FA + L C +
Sbjct: 114 VDMLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDC-EQFM 172
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPA 209
FP G +S+ GGLR + NP VP+
Sbjct: 173 CFPPGHIYSSKQGGLRRWYNPPWFSEVVPS 202
>sp|Q54MB4|ASNS_DICDI Probable asparagine synthetase [glutamine-hydrolyzing]
OS=Dictyostelium discoideum GN=asns PE=1 SV=1
Length = 557
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G FAF+VY+K ++ A VPLY G DG + F+ + +K C K
Sbjct: 117 VHMLDGDFAFVVYNKKANSFLAARDPIGVVPLYIGWHKDGSIWFSSEMKAIKDDCYK-FQ 175
Query: 180 SFPQGCFFSTAVGGLRSFENP 200
FP G +FS+ + P
Sbjct: 176 PFPPGHYFSSKTKEFVRYYKP 196
>sp|P49078|ASNS1_ARATH Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Arabidopsis
thaliana GN=ASN1 PE=2 SV=2
Length = 584
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G F+F++ D ++ VA LY G DG V + + L C +
Sbjct: 114 VDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC-EHFE 172
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPAAEEE 213
+FP G F+S+ +GG + + NP +VP+ E
Sbjct: 173 TFPPGHFYSSKLGGFKQWYNPPWFNESVPSTPYE 206
>sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus
officinalis PE=2 SV=2
Length = 590
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS------VPLYWGITADGHVAFADDADLLKGACGKSL 178
V L G F+F++ D + + FVA+ PLY G DG V + + L C +
Sbjct: 114 VDMLDGMFSFVLLD-TRNNCFVAARDAVGITPLYIGWGLDGSVWLSSEMKGLNDDC-EHF 171
Query: 179 ASFPQGCFFSTAVGGLRSFENPKNKITAVPAA 210
FP G +S+ G R + NP+ +P+A
Sbjct: 172 EVFPPGNLYSSRSGSFRRWYNPQWYNETIPSA 203
>sp|P19252|ASNS2_PEA Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum
sativum GN=AS2 PE=2 SV=3
Length = 583
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G F+F+ D ++ VA LY G DG V + + L C +
Sbjct: 114 VDMLDGIFSFVPLDTRDNSYIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC-EHFE 172
Query: 180 SFPQGCFFSTAVGGLRSFENPKNKITAVPAA 210
FP G +S+ G R + NP A+P+A
Sbjct: 173 CFPPGHLYSSKDSGFRRWYNPSWYSEAIPSA 203
>sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria
versicolor GN=AS PE=2 SV=3
Length = 586
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 128 LSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFP 182
L G F+F++ D +T A LY G DG V + + L C ++ FP
Sbjct: 117 LDGMFSFVLLDSRDNTFIAARDAFGITSLYIGWGLDGSVWISSELKGLHDEC-ENFEVFP 175
Query: 183 QGCFFSTAVGGLRSFENPKNKITAVPA 209
G +S+ G R + NP A+P+
Sbjct: 176 PGHVYSSKTEGFRRWYNPPWFSEAIPS 202
>sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea
PE=2 SV=2
Length = 586
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA 179
V L G F+F++ D ++ VA LY G DG + + + L C +
Sbjct: 114 VDMLDGIFSFVLLDTRDNSFMVARDAVGVTSLYIGWGLDGSLWVSSEMKGLHEDC-EHFE 172
Query: 180 SFPQGCFFST-AVGGLRSFENPKNKITAVPAAEEE 213
+FP G +S+ + GG + + NP +VP+ E
Sbjct: 173 AFPPGHLYSSKSGGGFKQWYNPPWFNESVPSTPYE 207
>sp|P78753|ASNS_SCHPO Probable asparagine synthetase [glutamine-hydrolyzing]
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=asn1 PE=1 SV=3
Length = 557
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 128 LSGYFAFIVYDKSTSTLFVASVP-----LYWGITADG--HVAFADDADLLKGACGKSLAS 180
L G F++++YD+ + A P LY G ++D FA + L C K +A
Sbjct: 118 LDGMFSWVLYDQDKDKVVAARDPIGITTLYQGFSSDSPDTAYFASELKALHPVCDKIIA- 176
Query: 181 FPQGCFFSTAVGGLRSFENP----KNKITAVP 208
FP G ++ + + P +NKI + P
Sbjct: 177 FPPGHYYDSETKQTVRYFKPSWWDENKIPSNP 208
>sp|P49090|ASNS2_YEAST Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ASN2 PE=1
SV=2
Length = 572
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 127 HLSGYFAFIVYDKSTSTLFVASVP-----LYWGITADG--HVAFADDADLLKGACGKSLA 179
+L G FAF +YD + A P LY G ++ V FA + L C S+
Sbjct: 115 YLDGMFAFCLYDSKKDRIVAARDPIGVVTLYMGRSSQSPETVYFASELKCLTDVC-DSII 173
Query: 180 SFPQGCFFSTAVGGLRSFENP 200
SFP G + + + + P
Sbjct: 174 SFPPGHVYDSETDKITRYFTP 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,648,541
Number of Sequences: 539616
Number of extensions: 3145289
Number of successful extensions: 7490
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 7483
Number of HSP's gapped (non-prelim): 16
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)