Query 026882
Match_columns 231
No_of_seqs 156 out of 1590
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 14:02:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026882.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026882hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01910 Wali7 This domain is p 100.0 7.3E-52 1.6E-56 352.1 24.4 217 2-221 1-224 (224)
2 PF12481 DUF3700: Aluminium in 100.0 3E-48 6.5E-53 325.3 20.8 219 2-221 1-228 (228)
3 PLN02549 asparagine synthase ( 100.0 3.8E-37 8.3E-42 295.4 22.0 170 26-203 17-196 (578)
4 PRK09431 asnB asparagine synth 100.0 3.9E-37 8.4E-42 294.5 21.5 168 27-202 18-196 (554)
5 PTZ00077 asparagine synthetase 100.0 1.9E-36 4.1E-41 291.2 21.7 170 27-203 18-206 (586)
6 COG0367 AsnB Asparagine syntha 100.0 4.1E-35 9E-40 279.8 18.3 170 27-205 17-204 (542)
7 cd00712 AsnB Glutamine amidotr 100.0 1.7E-33 3.6E-38 240.5 21.7 166 26-199 15-220 (220)
8 TIGR01536 asn_synth_AEB aspara 100.0 2.1E-33 4.6E-38 263.9 20.8 165 27-199 15-222 (467)
9 TIGR03104 trio_amidotrans aspa 100.0 1.5E-33 3.2E-38 271.8 20.2 168 26-201 16-226 (589)
10 PRK08525 amidophosphoribosyltr 100.0 2.3E-32 5.1E-37 255.5 23.2 189 28-218 15-256 (445)
11 PRK07631 amidophosphoribosyltr 100.0 2.6E-32 5.6E-37 256.2 21.7 188 28-218 25-264 (475)
12 TIGR03108 eps_aminotran_1 exos 100.0 2.6E-32 5.6E-37 264.9 19.8 169 26-201 17-227 (628)
13 cd00714 GFAT Glutamine amidotr 100.0 7.1E-32 1.5E-36 230.3 18.8 159 28-188 14-214 (215)
14 PRK06388 amidophosphoribosyltr 100.0 1.3E-31 2.9E-36 251.5 21.6 189 27-218 32-272 (474)
15 PRK07349 amidophosphoribosyltr 100.0 2.1E-31 4.5E-36 251.3 22.5 189 28-218 48-293 (500)
16 PRK07272 amidophosphoribosyltr 100.0 3.3E-31 7.2E-36 249.2 22.4 193 27-221 24-269 (484)
17 PRK08341 amidophosphoribosyltr 100.0 4.1E-31 8.9E-36 246.5 22.3 187 27-218 16-252 (442)
18 PRK06781 amidophosphoribosyltr 100.0 4.9E-31 1.1E-35 247.7 22.8 188 28-218 25-264 (471)
19 PRK07847 amidophosphoribosyltr 100.0 6.5E-31 1.4E-35 248.4 21.6 188 28-218 38-283 (510)
20 KOG0571 Asparagine synthase (g 100.0 2.7E-32 5.9E-37 247.2 10.4 173 26-205 16-198 (543)
21 PRK09123 amidophosphoribosyltr 100.0 1.9E-30 4E-35 244.3 23.1 189 27-218 34-276 (479)
22 PRK05793 amidophosphoribosyltr 100.0 3.5E-30 7.6E-35 242.2 21.9 189 28-219 30-270 (469)
23 cd00715 GPATase_N Glutamine am 100.0 1.8E-29 4E-34 220.0 22.3 187 27-215 13-252 (252)
24 PLN02440 amidophosphoribosyltr 100.0 1.3E-29 2.9E-34 238.8 22.6 189 28-218 15-256 (479)
25 TIGR01134 purF amidophosphorib 100.0 2.4E-29 5.2E-34 235.2 23.0 189 27-218 14-254 (442)
26 PRK00331 glucosamine--fructose 100.0 1.1E-29 2.4E-34 245.5 21.2 170 27-198 14-225 (604)
27 TIGR01135 glmS glucosamine--fr 100.0 6.6E-30 1.4E-34 247.2 19.6 169 28-198 14-224 (607)
28 PRK09246 amidophosphoribosyltr 100.0 1.5E-29 3.3E-34 239.6 19.8 192 28-220 15-272 (501)
29 cd03766 Gn_AT_II_novel Gn_AT_I 100.0 1.8E-29 4E-34 210.3 14.9 150 27-186 18-180 (181)
30 PTZ00295 glucosamine-fructose- 100.0 1.2E-27 2.7E-32 232.8 20.2 170 27-198 37-255 (640)
31 cd01907 GlxB Glutamine amidotr 100.0 2.9E-27 6.3E-32 206.1 17.5 158 26-188 15-248 (249)
32 cd01909 betaLS_CarA_N Glutamin 99.9 1E-26 2.2E-31 196.2 17.5 118 73-200 49-199 (199)
33 cd00352 Gn_AT_II Glutamine ami 99.9 2.2E-26 4.8E-31 194.2 17.3 157 31-187 21-220 (220)
34 COG0034 PurF Glutamine phospho 99.9 3.3E-25 7.1E-30 203.3 18.7 190 27-218 19-264 (470)
35 PLN02981 glucosamine:fructose- 99.9 2.4E-24 5.2E-29 210.9 19.5 171 27-198 20-277 (680)
36 PTZ00394 glucosamine-fructose- 99.9 1.2E-23 2.6E-28 205.6 20.2 145 52-197 98-279 (670)
37 PF13537 GATase_7: Glutamine a 99.9 1E-24 2.2E-29 171.1 10.2 112 57-172 1-125 (125)
38 PF13522 GATase_6: Glutamine a 99.9 4.8E-23 1E-27 163.5 13.0 117 42-166 1-133 (133)
39 KOG0572 Glutamine phosphoribos 99.9 2.6E-22 5.5E-27 180.2 16.8 188 31-220 20-274 (474)
40 COG0449 GlmS Glucosamine 6-pho 99.9 2.9E-22 6.3E-27 190.7 16.2 165 27-195 15-219 (597)
41 TIGR03442 conserved hypothetic 99.6 4.5E-15 9.7E-20 129.7 14.4 135 51-195 82-247 (251)
42 cd01908 YafJ Glutamine amidotr 99.6 2.8E-15 6.1E-20 131.1 13.1 133 51-191 80-256 (257)
43 cd00713 GltS Glutamine amidotr 99.6 1.2E-13 2.6E-18 127.8 16.3 131 51-191 201-394 (413)
44 KOG1268 Glucosamine 6-phosphat 99.5 3.9E-14 8.5E-19 132.0 11.8 163 34-197 27-284 (670)
45 PF00310 GATase_2: Glutamine a 99.2 1E-10 2.2E-15 107.2 12.8 110 50-167 194-361 (361)
46 KOG0573 Asparagine synthase [A 99.0 2.6E-09 5.7E-14 98.6 11.5 141 30-184 20-171 (520)
47 PRK11750 gltB glutamate syntha 98.8 4.5E-08 9.8E-13 101.7 14.3 66 124-191 332-404 (1485)
48 PF13230 GATase_4: Glutamine a 98.7 3.7E-07 8E-12 80.8 12.7 136 52-194 72-253 (271)
49 COG0067 GltB Glutamate synthas 98.1 1.7E-05 3.6E-10 72.8 8.8 132 51-194 202-363 (371)
50 COG0121 Predicted glutamine am 97.3 0.0019 4.1E-08 56.7 9.9 137 52-193 71-245 (252)
51 PF09147 DUF1933: Domain of un 97.3 0.0048 1E-07 51.2 10.9 105 75-189 48-186 (201)
52 KOG0399 Glutamate synthase [Am 90.0 1 2.2E-05 47.5 7.3 42 149-190 434-477 (2142)
53 TIGR03823 FliZ flagellar regul 39.8 20 0.00044 29.3 1.9 19 74-92 33-51 (168)
54 PRK11582 flagella biosynthesis 39.1 21 0.00046 29.2 1.9 19 74-92 33-51 (169)
55 KOG0876 Manganese superoxide d 32.9 1.5E+02 0.0032 25.9 6.1 74 78-155 93-182 (234)
56 COG4875 Uncharacterized protei 22.0 1.8E+02 0.0038 23.1 4.3 36 129-168 114-149 (156)
57 COG4315 Uncharacterized protei 21.2 91 0.002 24.5 2.5 30 125-156 86-117 (138)
58 PF10611 DUF2469: Protein of u 20.6 3.1E+02 0.0067 20.5 5.1 51 100-167 10-61 (101)
59 COG4256 HemP Hemin uptake prot 20.4 56 0.0012 22.4 1.0 21 67-87 31-51 (63)
No 1
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum. Wali7 has a single domain similar to the glutamine amidotransferase domain of glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The Wali7 domain is also somewhat similar to the Ntn hydrolase fold of the proteasomal alph and beta subunits.
Probab=100.00 E-value=7.3e-52 Score=352.12 Aligned_cols=217 Identities=65% Similarity=1.113 Sum_probs=196.1
Q ss_pred cccccccccCCccccccCCCCCCCchhhHHHHHHHhHccCCCCcceEECCcEEEEEeeCCCCCCCCCeeeeCCcEEEEEe
Q 026882 2 LGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVKDEIFCLFE 81 (231)
Q Consensus 2 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r~~~~~~~QP~~~~~~~~~lv~n 81 (231)
||||++.||+|||||+||.+..+ +....++++.+....|++..+.+++...|+++..+.....|.+++.++++++++|
T Consensus 1 laif~~~~~~~p~el~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~rl~~~~~~~~~vfn 78 (224)
T cd01910 1 LAVFSKAVAKPPEELVSAGSRTP--AKTAEELLKRFLSANPSAVFVHLGAAGFLAYSHHNQSPLHPRLFAVKDDIFCLFQ 78 (224)
T ss_pred CcccccccCCCChHHcCCCcccc--CCCHHHHHHHHHhcCCCcEEEEcCCceEEEEecCCCCcccCcEECCCCCEEEEEE
Confidence 79999999999999999986655 3344578899999999998888888899998765555667778888899999999
Q ss_pred eEEcchHHHHHHhCcCCCCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEe
Q 026882 82 GALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGIT 156 (231)
Q Consensus 82 GeI~N~~eL~~~l~~~~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~ 156 (231)
|+|||+.+|+++|+..++.+|+++|+++|+++.++|++|.++++++|+|+|||||||.+++++++|| +||||+.+
T Consensus 79 GeIyN~~eLr~~lg~~~t~sD~evIl~lY~~~~d~G~y~~~~~l~~L~G~FAFvi~D~~~~~l~lARD~~Gi~PLYyg~~ 158 (224)
T cd01910 79 GHLDNLGSLKQQYGLSKTANEAMLVIEAYRTLRDRGPYPADQVVKDLEGSFAFVLYDKKTSTVFVASDADGSVPLYWGIA 158 (224)
T ss_pred eEEcCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcCCccHHHHHHhcCeEEEEEEEECCCCEEEEEEcCCCCcceEEEEe
Confidence 9999999999999877788999999999999878887776789999999999999999999999999 99999987
Q ss_pred cCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECCCCCCCCCCCCcce--eeCceeEE
Q 026882 157 ADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNKITAVPAAEEE--IWGATFKV 221 (231)
Q Consensus 157 ~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~~~~~~~~~r~ds~--~~g~~~~~ 221 (231)
.+|.++||||+++|...|.+.+.+|||||||.+ ++++++|++|.|+++++||+||+ |||++|||
T Consensus 159 ~dG~l~FASElkaL~~~c~~~~~~FPpG~~~~s-~ggl~~~~~p~~~~~~vp~~~s~g~~cg~~f~v 224 (224)
T cd01910 159 ADGSVVFSDDVELVKASCGKSFAPFPKGCFFHS-EGGLRSFEHPMNKLKAVPRVDSEGEMCGATFKV 224 (224)
T ss_pred CCCEEEEEeCHHHhhhhhccEEEEECCCCEEeC-CCCEEEeeCCCchhhcCCcccCcccEecceeeC
Confidence 689999999999999999777999999999988 78899999999999999999998 99999997
No 2
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length. There are two conserved sequence motifs: YGL and LRDR.
Probab=100.00 E-value=3e-48 Score=325.28 Aligned_cols=219 Identities=56% Similarity=1.000 Sum_probs=207.1
Q ss_pred cccccccccCCccccccCCCCCCC--chhhHHHHHHHhHccCCCCcceEECCcEEEEEeeCCCCCCCCCeeeeCCcEEEE
Q 026882 2 LGVFSSAIVSPPEELVAAGSRTPS--PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVKDEIFCL 79 (231)
Q Consensus 2 ~~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r~~~~~~~QP~~~~~~~~~lv 79 (231)
||||+++||+|||||+||.+..++ +++...++++.+....|++.++.+++.+.|++++.+....+|.++..-+++.|+
T Consensus 1 LavF~k~va~~PeeL~sp~s~~~s~~~~k~~~ell~~F~s~~p~a~s~~~g~~~~lAys~~~~~~l~pR~F~~~DdIfCi 80 (228)
T PF12481_consen 1 LAVFHKSVAKPPEELNSPASSLPSSKKPKGPEELLKDFVSANPNAFSMNFGDSAALAYSHSNQSSLHPRLFAGVDDIFCI 80 (228)
T ss_pred CcccccccCCCchHhcCcccCCCcccCCCCHHHHHHHHHHhCCCeEEEEcCCCEEEEEecCCCCccccccccccCCEEEE
Confidence 799999999999999999977543 788999999999999999999999999999999866666677778877899999
Q ss_pred EeeEEcchHHHHHHhCcCCCCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEE
Q 026882 80 FEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWG 154 (231)
Q Consensus 80 ~nGeI~N~~eL~~~l~~~~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg 154 (231)
|-|.|.|...|+++|+++++.+|+.+++++|++++|+||++..+++++|+|.|||||||..++++++|| .|||||
T Consensus 81 F~G~L~Nl~~L~qqYGLsK~~nEa~~vIEAYrtLRDRgPyPadqvv~~L~G~FaFVlyD~~~~tvf~A~d~~G~vpLyWG 160 (228)
T PF12481_consen 81 FLGSLENLCSLRQQYGLSKGANEAMFVIEAYRTLRDRGPYPADQVVKDLEGSFAFVLYDSKTGTVFVARDSDGSVPLYWG 160 (228)
T ss_pred EecchhhHHHHHHHhCcCcCcchhhhHHHHHHHhhccCCCChHHHHHhccCceEEEEEecCCCcEEEeecCCCCcceEEE
Confidence 999999999999999999999999999999999999999998899999999999999999999999999 999999
Q ss_pred EecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECCCCCCCCCCCCcce--eeCceeEE
Q 026882 155 ITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNKITAVPAAEEE--IWGATFKV 221 (231)
Q Consensus 155 ~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~~~~~~~~~r~ds~--~~g~~~~~ 221 (231)
++.||.++||+++..|...|.+...+||+|++|+++ +|+++|.+|.++++++||+||+ |||++|||
T Consensus 161 i~~DGslv~Sdd~~~ik~~C~kS~ApFP~Gc~f~S~-~Gl~sfehP~nk~k~~prvDseG~~cGa~FkV 228 (228)
T PF12481_consen 161 IAADGSLVFSDDLELIKEGCGKSFAPFPAGCFFSSE-GGLRSFEHPKNKVKAMPRVDSEGQMCGATFKV 228 (228)
T ss_pred EeCCCCEEEcCCHHHHHhhhhhccCCCCcceEEEec-CceEeecCCcccccccccccCcccCcceeeeC
Confidence 998999999999999999999999999999999984 7899999999999999999999 99999997
No 3
>PLN02549 asparagine synthase (glutamine-hydrolyzing)
Probab=100.00 E-value=3.8e-37 Score=295.42 Aligned_cols=170 Identities=22% Similarity=0.393 Sum_probs=153.2
Q ss_pred chhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhC--cCCCC
Q 026882 26 PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG--LAKSA 100 (231)
Q Consensus 26 ~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~--~~~~d 100 (231)
.++.+.+|++.|+|||||+++++..++++|||+| .+...+.||+++.++++++++||||||+.+|+++|. .+++.
T Consensus 17 ~~~~~~~m~~~l~hRGPD~~g~~~~~~~~Lgh~RLsI~d~~~g~QP~~~~~~~~~lv~NGEIyN~~eLr~~L~~~~f~t~ 96 (578)
T PLN02549 17 KRSRVLELSRRLRHRGPDWSGLYGNEDCYLAHERLAIMDPESGDQPLYNEDKTIVVTANGEIYNHKELREKLKLHKFRTG 96 (578)
T ss_pred hHHHHHHHHHHhcCcCCCccCEEEeCCeEEEEeeeeEeCCCCCCCCcCcCCCCEEEEEEEEEEcHHHHHHHHHhCCCCCC
Confidence 4467889999999999999999999999999999 566688999999888999999999999999999986 36778
Q ss_pred cHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhcc
Q 026882 101 NEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACG 175 (231)
Q Consensus 101 ~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~ 175 (231)
+|+++|+++|++ ||. +++++|+|+|||+|||..+++++++| |||||+...++.++||||+|+|...|.
T Consensus 97 sD~Evil~ly~~------~G~-~~~~~L~G~FAf~i~D~~~~~l~~aRD~~GikPLyyg~~~~g~~~fASE~KaL~~~~~ 169 (578)
T PLN02549 97 SDCEVIAHLYEE------HGE-EFVDMLDGMFSFVLLDTRDNSFIAARDHIGITPLYIGWGLDGSVWFASEMKALCDDCE 169 (578)
T ss_pred CHHHHHHHHHHH------HHH-HHHHhCCCceEEEEEECCCCEEEEEECCCCCCCeEEEEecCCeEEEEecHHHHHHHhC
Confidence 888888999998 674 89999999999999999899999999 999999875688999999999999885
Q ss_pred CceEEeCCCeEEEEeCCcEEEEECCCCC
Q 026882 176 KSLASFPQGCFFSTAVGGLRSFENPKNK 203 (231)
Q Consensus 176 ~~v~~~ppG~~~~~~~~~~~~y~~~~~~ 203 (231)
.|+.|||||++.++.+++++||++.+.
T Consensus 170 -~I~~lpPGh~l~~~~~~~~~y~~~~~~ 196 (578)
T PLN02549 170 -RFEEFPPGHYYSSKAGGFRRWYNPPWF 196 (578)
T ss_pred -CEEEeCCCeEEEEcCCCEEEEEecccC
Confidence 599999999998876679999998764
No 4
>PRK09431 asnB asparagine synthetase B; Provisional
Probab=100.00 E-value=3.9e-37 Score=294.50 Aligned_cols=168 Identities=19% Similarity=0.389 Sum_probs=151.9
Q ss_pred hhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc---CCCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL---AKSA 100 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~---~~~d 100 (231)
+..+.+|++.|+|||||+++++..++++|||+| ++...+.||+++.++++++++||||||+.+|+++|.. ++++
T Consensus 18 ~~~~~~m~~~l~hRGPD~~g~~~~~~~~lgh~RLsIid~~~g~QP~~~~~~~~~lv~NGEIyN~~eLr~~L~~~~~f~t~ 97 (554)
T PRK09431 18 RKKALEMSRLMRHRGPDWSGIYASDNAILGHERLSIVDVNGGAQPLYNEDGTHVLAVNGEIYNHQELRAELGDKYAFQTG 97 (554)
T ss_pred HHHHHHHHHHhhCCCCCcCCEEEeCCeEEEEEEeeecCCCCCCCCCCcCCCCEEEEEEEEEecHHHHHHHHhccCCcCCC
Confidence 467889999999999999999999999999999 5666799999988899999999999999999999853 6778
Q ss_pred cHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhcc
Q 026882 101 NEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACG 175 (231)
Q Consensus 101 ~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~ 175 (231)
+|+++|+++|++ ||. +++++|+|+|||+|||..++++++|| |||||+...++.++||||+|+|+..|.
T Consensus 98 sD~Evil~ly~~------~G~-~~~~~L~G~FAf~i~D~~~~~l~laRD~~GikPLyy~~~~~~~~~faSE~kaL~~~~~ 170 (554)
T PRK09431 98 SDCEVILALYQE------KGP-DFLDDLDGMFAFALYDSEKDAYLIARDPIGIIPLYYGYDEHGNLYFASEMKALVPVCK 170 (554)
T ss_pred CHHHHHHHHHHH------HHH-HHHHhCCCceEEEEEECCCCEEEEEeCCCCCcceEEEEeCCCeEEEecchHHHHHhcC
Confidence 888888999998 775 89999999999999999999999999 999999884489999999999999885
Q ss_pred CceEEeCCCeEEEEeCCcEEEEECCCC
Q 026882 176 KSLASFPQGCFFSTAVGGLRSFENPKN 202 (231)
Q Consensus 176 ~~v~~~ppG~~~~~~~~~~~~y~~~~~ 202 (231)
.|+.|||||++.++++.+.+||++.+
T Consensus 171 -~I~~lpPGh~l~~~~g~~~~y~~~~~ 196 (554)
T PRK09431 171 -TIKEFPPGHYYWSKDGEFVRYYQRDW 196 (554)
T ss_pred -CEEEECCCeEEEECCCcEEEecCCCc
Confidence 59999999999886666899998765
No 5
>PTZ00077 asparagine synthetase-like protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=291.18 Aligned_cols=170 Identities=24% Similarity=0.415 Sum_probs=149.7
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC-----CcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc--
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG-----DNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL-- 96 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~-----~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~-- 96 (231)
++.+.+|+++|+|||||+++++.. +.++|||+| ++...+.||+.+.+++++++|||||||+.+|+++|..
T Consensus 18 ~~~~~~m~~~l~HRGPD~~g~~~~~~~~~~~~~lgh~RLsIvd~~~g~QP~~~~d~~~~lv~NGEIYN~~eLr~~L~~~g 97 (586)
T PTZ00077 18 RRKALELSKRLRHRGPDWSGIIVLENSPGTYNILAHERLAIVDLSDGKQPLLDDDETVALMQNGEIYNHWEIRPELEKEG 97 (586)
T ss_pred HHHHHHHHHHHhCCCCCcCCEEEeccCCCCcEEEEeccceecCCCCCCCCcCCCCCCEEEEEEEEEcCHHHHHHHHHhcC
Confidence 456788999999999999999975 578999999 5666799999998899999999999999999999852
Q ss_pred --CCCCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhh
Q 026882 97 --AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADL 169 (231)
Q Consensus 97 --~~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~a 169 (231)
+++.+|+++|+++|++ ||..+++++|+|+|||+|||..++++++|| |||||+...++.++||||+|+
T Consensus 98 ~~f~t~sD~Evil~ly~~------~G~~~~l~~L~G~FAf~i~D~~~~~l~~aRD~~GikPLyy~~~~~g~~~faSE~ka 171 (586)
T PTZ00077 98 YKFSSNSDCEIIGHLYKE------YGPKDFWNHLDGMFATVIYDMKTNTFFAARDHIGIIPLYIGYAKDGSIWFSSELKA 171 (586)
T ss_pred CcCCCCCHHHHHHHHHHH------hCHHHHHHhcCCCEEEEEEECCCCEEEEEECCCCCcCeEEEEecCCeEEEEecHHH
Confidence 6778888889999998 774379999999999999999999999999 999999865688999999999
Q ss_pred HhhhccCceEEeCCCeEEEEeC--CcEEEEECCCCC
Q 026882 170 LKGACGKSLASFPQGCFFSTAV--GGLRSFENPKNK 203 (231)
Q Consensus 170 L~~~~~~~v~~~ppG~~~~~~~--~~~~~y~~~~~~ 203 (231)
|...|. .|..|||||++..+. ..+++||++.+.
T Consensus 172 L~~~~~-~I~~lpPGh~l~~~~~~~~~~~y~~~~~~ 206 (586)
T PTZ00077 172 LHDQCV-EVKQFPPGHYYDQTKEKGEFVRYYNPNWH 206 (586)
T ss_pred HHHhcC-CEEEeCCCcEEEecCCcceeEEecCCccc
Confidence 998885 599999999998764 358899987653
No 6
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-35 Score=279.81 Aligned_cols=170 Identities=22% Similarity=0.387 Sum_probs=153.2
Q ss_pred hhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKS 99 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~ 99 (231)
...+.+|.+.|+|||||.+++|..+++.+||.| ++...++||+...+++++++|||||||+.+||++|.. +.+
T Consensus 17 ~~~~~~m~~~l~hRGPD~~g~~~~~~~~~gh~rL~i~d~~~g~QP~~~~~~~~~l~~NGEIYN~~elr~~l~~~g~~f~t 96 (542)
T COG0367 17 KSIIEEMTKLLRHRGPDDSGVWISLNALLGHRRLSIVDLSGGRQPMIKEGGKYAIVYNGEIYNVEELRKELREAGYEFRT 96 (542)
T ss_pred hHHHHHHHHHhhccCCCccccEecCCceeeeeEEEEeccccCCCCcccCCCcEEEEECCEeeeHHHHHHHHHhcCceecc
Confidence 778999999999999999999999999999999 5666789999886677999999999999999999973 777
Q ss_pred CcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhh-
Q 026882 100 ANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGA- 173 (231)
Q Consensus 100 d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~- 173 (231)
++|+++|+++|++ ||. +|+.+|+|+|||||||..+++|+++| |||||+.. ++.++||||+|+|+.+
T Consensus 97 ~sDtEvil~~y~~------~g~-~~~~~l~G~fAfai~d~~~~~l~laRD~~GikPLyy~~~-~~~l~faSE~Kal~~~~ 168 (542)
T COG0367 97 YSDTEVILTLYEE------WGE-DCVEHLNGMFAFAIYDETRQKLFLARDPFGVKPLYYTSK-NENLAFASEIKALLAHP 168 (542)
T ss_pred ccchHHHHHHHHH------HHH-HHHHHhccceEEEEEECCCCEEEEEecCCCccccEEEec-CCceEEEechhhhhhCC
Confidence 7888888899998 775 79999999999999999999999999 99999998 6779999999999998
Q ss_pred ----ccCceEEeCCCeEEEEeCCc-EEEEECCCCCCC
Q 026882 174 ----CGKSLASFPQGCFFSTAVGG-LRSFENPKNKIT 205 (231)
Q Consensus 174 ----~~~~v~~~ppG~~~~~~~~~-~~~y~~~~~~~~ 205 (231)
+. .|++|||||+++.+.++ +.+||.+.+...
T Consensus 169 ~~~~~~-~i~~l~pg~~l~~~~~~~~~~y~~~~~~~~ 204 (542)
T COG0367 169 VVRFLR-DIKELPPGHLLEFTDGGLIRRYWRLSEKTS 204 (542)
T ss_pred cccccC-CeEEcCCCcEEEEcCCCceeeeeccccccc
Confidence 64 59999999999987666 999998776443
No 7
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a synthetase domain. The N-terminal glutaminase domain hydrolyzes glutamine to glutamic acid and ammonia.
Probab=100.00 E-value=1.7e-33 Score=240.49 Aligned_cols=166 Identities=23% Similarity=0.463 Sum_probs=145.2
Q ss_pred chhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CC
Q 026882 26 PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AK 98 (231)
Q Consensus 26 ~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~ 98 (231)
....+..|+..|+|||||+.+++..++++|||+| .+...+.||+...+++++++|||+|||+.+|+++|.. ..
T Consensus 15 ~~~~~~~~~~~l~hRGpd~~~~~~~~~~~lgh~rl~~~~~~~~~qP~~~~~~~~~~~~nG~i~N~~~L~~~l~~~~~~~~ 94 (220)
T cd00712 15 DRATLERMLDALAHRGPDGSGIWIDEGVALGHRRLSIIDLSGGAQPMVSEDGRLVLVFNGEIYNYRELRAELEALGHRFR 94 (220)
T ss_pred hHHHHHHHHHHHhccCCCCCCEEEECCEEEEEEeeeecCcccCCCCeEeCCCCEEEEEEEEEeCHHHHHHHHHhcCCcCC
Confidence 4577899999999999999999999999999999 2233689999888789999999999999999999864 46
Q ss_pred CCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhh
Q 026882 99 SANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGA 173 (231)
Q Consensus 99 ~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~ 173 (231)
+.+|+++++++|++ || .+++++|+|+|||++||.++++++++| +||||+.. ++.++||||+++|...
T Consensus 95 ~~sD~e~l~~~~~~------~g-~~~~~~l~G~fa~vi~d~~~~~l~~~rD~~G~~pLy~~~~-~~~~~~aSe~~~l~~~ 166 (220)
T cd00712 95 THSDTEVILHLYEE------WG-EDCLERLNGMFAFALWDKRKRRLFLARDRFGIKPLYYGRD-GGGLAFASELKALLAL 166 (220)
T ss_pred CCChHHHHHHHHHH------Hh-HHHHHHhhheEEEEEEECCCCEEEEEECCCCCEeeEEEEE-CCEEEEEcchHHHHhc
Confidence 77888899999998 66 489999999999999999899999999 99999998 6889999999999765
Q ss_pred cc--------------------------CceEEeCCCeEEEEeCCc--EEEEEC
Q 026882 174 CG--------------------------KSLASFPQGCFFSTAVGG--LRSFEN 199 (231)
Q Consensus 174 ~~--------------------------~~v~~~ppG~~~~~~~~~--~~~y~~ 199 (231)
+. +.|+.|||||++..+.++ .++||+
T Consensus 167 ~~~~~~~d~~~l~~~l~~~~~~~~~T~~~~V~~l~pG~~l~~~~~~~~~~~yw~ 220 (220)
T cd00712 167 PGVPRELDEAALAEYLAFQYVPAPRTIFKGIRKLPPGHYLTVDPGGVEIRRYWD 220 (220)
T ss_pred CCCCCCcCHHHHHHHHhcCCCCCCCchhcCceEECCceEEEEECCCeEEeeeCC
Confidence 43 469999999999887654 567874
No 8
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=100.00 E-value=2.1e-33 Score=263.89 Aligned_cols=165 Identities=19% Similarity=0.323 Sum_probs=143.4
Q ss_pred hhhHHHHHHHhHccCCCCcceE-ECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQ-VGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AK 98 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~-~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~ 98 (231)
+..+.+|++.|+|||||++++| .+++++|||+| .+...+.||+.+.+++++++|||+|||+.+|+++|.. +.
T Consensus 15 ~~~~~~m~~~l~hRGPD~~g~~~~~~~~~lgh~rl~i~d~~~~~qP~~~~~~~~~lv~nGeiyN~~eL~~~l~~~g~~~~ 94 (467)
T TIGR01536 15 DEAILRMSDTIAHRGPDASGIEYKDGNAILGHRRLAIIDLSGGAQPMSNEGKTYVIVFNGEIYNHEELREELEAKGYTFQ 94 (467)
T ss_pred HHHHHHHHHHhhCcCCCcCCcEEccCCEEEEEEEeEEeCCCCCCCeeECCCCCEEEEEeeEEcCHHHHHHHHHhcCCccC
Confidence 4578999999999999999999 88999999999 4555669999998889999999999999999999863 56
Q ss_pred CCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhh
Q 026882 99 SANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGA 173 (231)
Q Consensus 99 ~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~ 173 (231)
+.+|+++++++|++ || .+++++|+|+|||+|||..+++++++| |||||+.. ++.++||||+++|...
T Consensus 95 ~~~D~e~il~~y~~------~g-~~~~~~l~G~fa~~i~D~~~~~l~laRD~~G~kPLyy~~~-~~~~~faSe~kaL~~~ 166 (467)
T TIGR01536 95 TDSDTEVILHLYEE------WG-EECVDRLDGMFAFALWDSKKGELFLARDRFGIKPLYYAYD-GGQLYFASEIKALLAH 166 (467)
T ss_pred CCCHHHHHHHHHHH------HH-HHHHHHcCCcEEEEEEECCCCEEEEEECCCCCcCeEEEEE-CCEEEEEecHHHHHhc
Confidence 77888888999998 77 489999999999999999999999999 99999988 7899999999999765
Q ss_pred c-c--------------------------CceEEeCCCeEEEEeCCc---EEEEEC
Q 026882 174 C-G--------------------------KSLASFPQGCFFSTAVGG---LRSFEN 199 (231)
Q Consensus 174 ~-~--------------------------~~v~~~ppG~~~~~~~~~---~~~y~~ 199 (231)
+ . ++|+.+||||++..+.++ .++||.
T Consensus 167 ~~~~~~~~d~~~l~~~l~~~~~~~~~T~~~~I~~l~pG~~l~~~~~~~~~~~~~~~ 222 (467)
T TIGR01536 167 PRNIKPFPDGAALAPGFGFVRVPPPSTFFRGVFELEPGHDLPLEDDGLNIERYYWE 222 (467)
T ss_pred cccCcCCCCHHHHHHHhccCccCCCCcccCCcEEcCCCeEEEEeCCCceEEEEecC
Confidence 4 1 468999999998876433 334554
No 9
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
Probab=100.00 E-value=1.5e-33 Score=271.84 Aligned_cols=168 Identities=20% Similarity=0.339 Sum_probs=146.2
Q ss_pred chhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCC-CCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----C
Q 026882 26 PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNE-SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----A 97 (231)
Q Consensus 26 ~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~-~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~ 97 (231)
....+..|++.|+|||||+++++.+++++|||+| .+. ..+.||+.+.+++++++|||+|||+.+|+++|.. +
T Consensus 16 ~~~~~~~m~~~l~hRGPD~~g~~~~~~~~lgh~rl~i~~~~~~~~QP~~~~~~~~~~v~nGeiyN~~eL~~~l~~~g~~f 95 (589)
T TIGR03104 16 DVAAVVRMLAVLAPRGPDAGGVHAQGPVALGHRRLKIIDLSEASQQPMVDAELGLALVFNGCIYNYRELRAELEALGYRF 95 (589)
T ss_pred hHHHHHHHHHhhcCCCCCcCCcEecCCEEEEEEeeEecCCCcCCCCCeECCCCCEEEEECCEecCHHHHHHHHHhcCCcc
Confidence 4467899999999999999999999999999999 444 3689999988889999999999999999999853 6
Q ss_pred CCCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhh
Q 026882 98 KSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKG 172 (231)
Q Consensus 98 ~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~ 172 (231)
.+.+|+++++++|++ ||. +++++|+|+|||+|||..+++++++| |||||+.. ++.++||||+++|+.
T Consensus 96 ~~~sD~Evil~~y~~------~G~-~~~~~l~G~fa~~i~d~~~~~l~laRD~~G~kPLyy~~~-~~~~~faSe~kaLl~ 167 (589)
T TIGR03104 96 FSDGDTEVILKAYHA------WGR-DCVSRFNGMFAFAIWERDSGRLLLARDRLGIKPLYYAED-AGRLRFASSLPALLA 167 (589)
T ss_pred cCCCHHHHHHHHHHH------HHH-HHHHHhhcceEEEEEeCCCCEEEEEecCCCCCCeEEEEe-CCEEEEEeCHHHHHh
Confidence 778888899999998 774 89999999999999999999999999 99999987 689999999999974
Q ss_pred hc---------------------------cCceEEeCCCeEEEEe-CCc--EEEEECCC
Q 026882 173 AC---------------------------GKSLASFPQGCFFSTA-VGG--LRSFENPK 201 (231)
Q Consensus 173 ~~---------------------------~~~v~~~ppG~~~~~~-~~~--~~~y~~~~ 201 (231)
.. .++|+.+||||+++++ ++. .++||++.
T Consensus 168 ~~~~~~~~d~~~l~~~l~~~~~~~~~~T~~~gI~~l~pG~~l~i~~~~~~~~~~yw~~~ 226 (589)
T TIGR03104 168 AGGVDTDIDPVALHHYLTFHAVVPAPHTILKGVRKLPPATWMTVEPDGSRTQRSYWSLD 226 (589)
T ss_pred CCCCCCCcCHHHHHHHHHhcCCCCCCCchhhCceeeCCCcEEEEECCCCeEEEeeccCC
Confidence 31 1468999999998775 343 56899865
No 10
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.3e-32 Score=255.51 Aligned_cols=189 Identities=13% Similarity=0.148 Sum_probs=149.3
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee---CCC--CCCCCCeee--eC
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH---QNE--SPLRQRSFA--VK 73 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r---~~~--~~~~QP~~~--~~ 73 (231)
..+..|+.+|+|||+|+.|+.. .++++|||+| .+. ..+.||+.+ .+
T Consensus 15 ~~~~~~L~~LqhRG~DsaGia~~~~~~~~~~k~~G~v~~~f~~~~~~~~~g~~~iGH~R~at~g~~~~~naqP~~~~~~~ 94 (445)
T PRK08525 15 KLAYYALFAMQHRGQEASGISVSNGKKIKTIKGRGLVTQVFNEDNLKTLKGEIAIGHNRYSTAGNDSILDAQPVFARYDL 94 (445)
T ss_pred HHHHHHHHHhhCcCcccceEEEEeCCEEEEEEcCcchhhccchhhhhccCCcEEEeecccccCCCCCCCCCCCeEeecCC
Confidence 4556899999999999999865 1468999999 221 367999987 56
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
++++++|||+|||+.+||++|.. +.+++|+++++++|.+..+... ..+.+++++|+|+|||+++|. ++++++|
T Consensus 95 g~~~lvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEvi~~l~~~~~~~~~~ea~~~~~~~L~G~fa~vi~~~--~~l~~~R 172 (445)
T PRK08525 95 GEIAIVHNGNLVNKKEVRSRLIQDGAIFQTNMDTENLIHLIARSKKESLKDRIIEALKKIIGAYCLVLLSR--SKMFAIR 172 (445)
T ss_pred CCEEEEEEEEEECHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCceEEEEEeC--CEEEEEE
Confidence 88999999999999999999853 6778888888999986321110 023478999999999999995 7899999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEe--CCcEEEE--ECCCC-----CCCCCCCCccee
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTA--VGGLRSF--ENPKN-----KITAVPAAEEEI 214 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~--~~~~~~y--~~~~~-----~~~~~~r~ds~~ 214 (231)
||||||...++.++||||.+||.....+.+++++||++++++ +++++.+ +.... +.-|++|+||.+
T Consensus 173 D~~GirPL~~g~~~~~~~~~ASE~~al~~~g~~~~~~~~pGe~v~i~~~~~~~~~~~~~~~~~~~c~fe~iY~~rpds~~ 252 (445)
T PRK08525 173 DPHGVRPLSLGRLKDGGYIVASETCAFDLIGAEFIRDVKPGEMLIFEQGNDEFESIQLFEPTPRICAFEYIYFARPDSIV 252 (445)
T ss_pred CCCCCCCeEEEEecCCEEEEEECHHHhhccCCcEEEEeCCCeEEEEEcCCCceEEEEecCCCCccceeEeeeecCCCceE
Confidence 999999864578999999999977766678999999998876 3455553 33222 223999999999
Q ss_pred eCce
Q 026882 215 WGAT 218 (231)
Q Consensus 215 ~g~~ 218 (231)
.|.+
T Consensus 253 ~g~~ 256 (445)
T PRK08525 253 FGKN 256 (445)
T ss_pred CCEE
Confidence 9975
No 11
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.6e-32 Score=256.19 Aligned_cols=188 Identities=14% Similarity=0.142 Sum_probs=150.9
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEeeC---C--CCCCCCCee--eeC
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTHQ---N--ESPLRQRSF--AVK 73 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r~---~--~~~~~QP~~--~~~ 73 (231)
..+..++.+|+|||+|+.|+.. .++++|||+|. . ...+.||+. +.+
T Consensus 25 ~~~~~gL~~LqHRG~dsaGia~~~~~~~~~~k~~Glv~~vf~~~~l~~l~G~~gIGH~RysT~G~~~~~n~QP~~~~~~~ 104 (475)
T PRK07631 25 QITYYGLHSLQHRGQEGAGIVVTDGGKLSAHKGLGLVTEVFQNGELDALKGKAAIGHVRYATAGGGGYENVQPLLFRSQT 104 (475)
T ss_pred HHHHHHHHHhcCCCcccCeEEEEcCCEEEEEEcccccchhhchhhhhccCCCEEEEEeeccccCCCCcCCcCCeEeEcCC
Confidence 4566889999999999999863 25689999991 1 136799985 456
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
++++++|||+|+|+++||++|.. +++++|+++++++|.+...... .++.+++++|+|+|||+++|. ++++++|
T Consensus 105 g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVi~~Li~~~~~~~~~eai~~~~~~l~G~yalvi~~~--~~l~aaR 182 (475)
T PRK07631 105 GSLALAHNGNLVNATQLKLQLENQGSIFQTTSDTEVLAHLIKRSGAPTLKEQIKNALSMLKGAYAFLLMTE--TELYVAL 182 (475)
T ss_pred CCEEEEEEEEEECHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCceeeEEeC--CEEEEEE
Confidence 78999999999999999999853 6778888888999987322110 123478999999999999995 6799999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEEC-CCC--CCC-----CCCCCcceee
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN-PKN--KIT-----AVPAAEEEIW 215 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~-~~~--~~~-----~~~r~ds~~~ 215 (231)
||||||.. ++.++||||.+||...+.+.+++++||++++++++++..+.. +.. ..+ ||+|+||.|+
T Consensus 183 Dp~GirPL~~G~~-~~~~~~ASE~~Al~~~g~~~ir~v~PGeiv~i~~~g~~~~~~~~~~~~~~C~fE~iYfarpdS~~~ 261 (475)
T PRK07631 183 DPNGLRPLSIGRL-GDAYVVASETCAFDVIGATYEREVEPGELLIINDEGMRSERFAPNQNRSICSMEYIYFARPDSNVD 261 (475)
T ss_pred CCCCCCCEEEEEe-CCEEEEEeChHHHhhcCcceEEEcCCCeEEEEECCcEEEEecCCCCCcccceEEEEEeecCCcccC
Confidence 99999998 678999999999988877779999999999887777766543 111 122 9999999999
Q ss_pred Cce
Q 026882 216 GAT 218 (231)
Q Consensus 216 g~~ 218 (231)
|.+
T Consensus 262 g~~ 264 (475)
T PRK07631 262 GIN 264 (475)
T ss_pred CeE
Confidence 976
No 12
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.
Probab=100.00 E-value=2.6e-32 Score=264.92 Aligned_cols=169 Identities=20% Similarity=0.343 Sum_probs=145.7
Q ss_pred chhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CC
Q 026882 26 PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AK 98 (231)
Q Consensus 26 ~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~ 98 (231)
....+..|++.|+|||||++++|.+++++|||+| .+...+.||+.+.+++++++|||+|||+.||+++|.. ..
T Consensus 17 ~~~~~~~m~~~l~hRGpD~~g~~~~~~~~lgh~rl~i~d~~~~~qP~~~~~~~~~lv~nGei~N~~eL~~~l~~~g~~~~ 96 (628)
T TIGR03108 17 DRDLLRRMNDAQAHRGPDGGGVHVEPGIGLGHRRLSIIDLSGGQQPLFNEDGSVVVVFNGEIYNFQELVAELQALGHVFR 96 (628)
T ss_pred cHHHHHHHHHHhcCCCCCccCeEeeCCEEEEEEeeeecCCCCCCCCcCcCCCCEEEEECCeECCHHHHHHHHHhcCCccC
Confidence 4567899999999999999999999999999999 4555789999998899999999999999999999853 56
Q ss_pred CCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhh
Q 026882 99 SANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGA 173 (231)
Q Consensus 99 ~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~ 173 (231)
+.+|+++++++|++ ||. +++++|+|+|||++||..+++++++| +||||+...++.++||||+++|+..
T Consensus 97 ~~sD~Evi~~~~~~------~g~-~~~~~l~G~fa~~~~d~~~~~l~~~rD~~G~~PLyy~~~~~~~~~faSe~~al~~~ 169 (628)
T TIGR03108 97 TRSDTEVIVHAWEE------WGE-ACVERFRGMFAFALWDRNQETLFLARDRLGIKPLYYALLADGWFIFGSELKALTAH 169 (628)
T ss_pred CCChHHHHHHHHHH------HHH-HHHHHcCCCEEEEEEECCCCEEEEEECCCCCcceEEEEeCCCEEEEEecHHHHHhC
Confidence 77888888899998 774 89999999999999999999999999 9999997546789999999998653
Q ss_pred c--------------------------cCceEEeCCCeEEEEeCC--c--EEEEECCC
Q 026882 174 C--------------------------GKSLASFPQGCFFSTAVG--G--LRSFENPK 201 (231)
Q Consensus 174 ~--------------------------~~~v~~~ppG~~~~~~~~--~--~~~y~~~~ 201 (231)
. .++|+.+||||++..+.+ . ..+||++.
T Consensus 170 ~~~~~~~d~~~l~~~l~~~~~~~~~T~~~gI~~l~pG~~l~~~~~~~~~~~~~yw~~~ 227 (628)
T TIGR03108 170 PSLPRELDPLAVEDYFAYGYVPDPRTIFKGVKKLEPGHTLTLRRGAPPARPRCYWDVS 227 (628)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCchhcCcEEECCCeEEEEECCCcceeccccccCC
Confidence 2 157999999999877643 2 45788864
No 13
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of glucosamine-6P synthase (GlmS, or GFAT in humans). The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. In humans, GFAT catalyzes the first and rate-limiting step of hexosamine metabolism, the conversion of D-fructose-6P (Fru6P) into D-glucosamine-6P using L-glutamine as a nitrogen source. The end product of this pathway, UDP-N-acetyl glucosamine, is a major building block of the bacterial peptidoglycan and fungal chitin.
Probab=100.00 E-value=7.1e-32 Score=230.27 Aligned_cols=159 Identities=18% Similarity=0.222 Sum_probs=133.0
Q ss_pred hhHHHHHHHhHccCCCCcceEEC---------------------------CcEEEEEee---CCC--CCCCCCeeeeCCc
Q 026882 28 TTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTH---QNE--SPLRQRSFAVKDE 75 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~lgh~r---~~~--~~~~QP~~~~~~~ 75 (231)
..+..|+.+++|||||+.+++.. +.++|||+| .+. ..+.||+...+++
T Consensus 14 ~~~~~~l~~l~hRG~d~~Gi~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~~ 93 (215)
T cd00714 14 DILLEGLKRLEYRGYDSAGIAVIGDGSLEVVKAVGKVANLEEKLAEKPLSGHVGIGHTRWATHGEPTDVNAHPHRSCDGE 93 (215)
T ss_pred HHHHHHHHHHhccCcCcceEEEEeCCEEEEEEcCccHHHHHHHhhhccCCccEEEEEEEccCCCCCCccCCCCCCcCCCC
Confidence 56778999999999999999863 568999999 222 3578999877778
Q ss_pred EEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC---CChHHHHhccccceEEEEEECCC-CEEEEE
Q 026882 76 IFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-STLFVA 147 (231)
Q Consensus 76 ~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~---~g~~~~l~~L~G~FAf~i~D~~~-~~l~~a 147 (231)
++++|||+|||+.+|+++|.. ..+.+|+++++++|.++...+. .++++++++|+|+|||++||..+ ++|+++
T Consensus 94 ~~~vhNG~I~N~~~Lr~~L~~~g~~~~~~sDsEvi~~l~~~~~~~~~~~~~ai~~~~~~l~G~fa~~~~d~~~~~~l~~~ 173 (215)
T cd00714 94 IAVVHNGIIENYAELKEELEAKGYKFESETDTEVIAHLIEYYYDGGLDLLEAVKKALKRLEGAYALAVISKDEPDEIVAA 173 (215)
T ss_pred EEEEEeEEEcCHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccceEEEEEEeCCCCEEEEE
Confidence 999999999999999999852 5667777788899987543321 12347899999999999999875 499999
Q ss_pred e--ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEE
Q 026882 148 S--VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFS 188 (231)
Q Consensus 148 R--kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~ 188 (231)
| |||||+.. ++.++||||+++|..+|.+ +..+.+|+++.
T Consensus 174 RD~~PL~~~~~-~~~~~~aSE~~al~~~~~~-~~~~~~~~~~~ 214 (215)
T cd00714 174 RNGSPLVIGIG-DGENFVASDAPALLEHTRR-VIYLEDGDIAV 214 (215)
T ss_pred ECCCCcEEEEc-CCeEEEEECHHHHHHhcCE-EEEECCCCEEe
Confidence 9 99999987 6789999999999999964 99999999874
No 14
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.3e-31 Score=251.47 Aligned_cols=189 Identities=12% Similarity=0.109 Sum_probs=151.1
Q ss_pred hhhHHHHHHHhHccCCCCcceEE--------------------------CCcEEEEEee---CC--CCCCCCCeee--eC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV--------------------------GDNVTLAYTH---QN--ESPLRQRSFA--VK 73 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~--------------------------~~~~~lgh~r---~~--~~~~~QP~~~--~~ 73 (231)
...+..++.+|+|||+|+.|+.. .++++|||+| .+ ...+.||+.. ..
T Consensus 32 ~~~~~~gL~~LqhRGqdsaGIa~~d~~~i~~~K~~Glv~~vf~~~~~~l~G~~gIGH~RyaT~G~~~~~naqP~~~~~~~ 111 (474)
T PRK06388 32 YSPIITALRTLQHRGQESAGMAVFDGRKIHLKKGMGLVTDVFNPATDPIKGIVGVGHTRYSTAGSKGVENAGPFVINSSL 111 (474)
T ss_pred HHHHHHHHHHhhCcCcCcceEEEEcCCEEEEEecCcchHHHhhhhhhcCCCcEEEeeeeeeecCCCCccCCCCeEeecCC
Confidence 45678999999999999999875 2457999999 22 2367899863 35
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhcc-CC-CChHHHHhccccceEEEEEECCCCEEEEE
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDR-AP-YPPNHVVGHLSGYFAFIVYDKSTSTLFVA 147 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~-g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~a 147 (231)
++++|+|||+|+|+.+||++|.. +.+++|+++++++|.+...+ +. .++++++++|+|+|||++++. ++|+++
T Consensus 112 g~ialvhNG~I~N~~eLr~~L~~~G~~F~s~sDtEVi~~li~~~~~~~~~~eai~~~~~~l~G~ya~vi~~~--~~l~a~ 189 (474)
T PRK06388 112 GYIGISHNGEIVNADELREEMKKEGYIFQSDSDTEVMLAELSRNISKYGLKEGFERSMERLRGAYACALMIN--DRLYAI 189 (474)
T ss_pred CCEEEEECceECCHHHHHHHHHHCCCcccCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHhccCceeEEEEEC--CEEEEE
Confidence 78999999999999999999953 67788888888999653322 21 123579999999999999874 789999
Q ss_pred e-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEEC-CCCC-------CCCCCCCccee
Q 026882 148 S-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN-PKNK-------ITAVPAAEEEI 214 (231)
Q Consensus 148 R-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~-~~~~-------~~~~~r~ds~~ 214 (231)
| ||||||.. ++.++||||.+||...+.+.+++++||+++++.+++++++.. ...+ .-||+|+||.+
T Consensus 190 RDp~GiRPL~~G~~-~~~~~~ASE~~Al~~~~~~~i~~l~PGeiv~i~~~g~~~~~~~~~~~~~~C~fE~iYfarpds~~ 268 (474)
T PRK06388 190 RDPNGIRPLVLGKN-FDGYIIASESCAIDALSGTTIKNVEPGEVVEVFDNGYKTIFKLDGDKVAHCMFEYVYFSRPDSII 268 (474)
T ss_pred ECCCCCCceEEEec-CCEEEEEEChHHHHhccCcEEEEeCCCEEEEEECCceEEEEecCCCccccceEEEEeecCCcccc
Confidence 9 89999987 677999999999998877779999999998887777765543 2111 12999999999
Q ss_pred eCce
Q 026882 215 WGAT 218 (231)
Q Consensus 215 ~g~~ 218 (231)
+|.+
T Consensus 269 ~g~~ 272 (474)
T PRK06388 269 DGIN 272 (474)
T ss_pred CCcH
Confidence 9975
No 15
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.1e-31 Score=251.30 Aligned_cols=189 Identities=14% Similarity=0.163 Sum_probs=150.0
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee---CCC--CCCCCCeeee--C
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH---QNE--SPLRQRSFAV--K 73 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r---~~~--~~~~QP~~~~--~ 73 (231)
..+..++.+|+|||+|+.|+.. .++++|||+| .+. ..+.||+... .
T Consensus 48 ~~~~~gL~~LqHRGqdsaGIa~~~~~~~~~~K~~Glv~~vf~~~~l~~l~G~i~IGHvRysT~G~~~~~naQP~~~~~~~ 127 (500)
T PRK07349 48 KLTYFGLYALQHRGQESAGIATFEGDKVHLHKDMGLVSQVFDEDILEELPGDLAVGHTRYSTTGSSRKANAQPAVLETRL 127 (500)
T ss_pred HHHHHHHHHhcccCcCcceEEEEeCCEEEEEecCcchhhhcchhhhhcCCCCEEEEEeecccCCCCCccCCCCeEeecCC
Confidence 4456889999999999999854 2457999999 121 3679999864 4
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccC-CC--ChHHHHhccccceEEEEEECCCCEEEE
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRA-PY--PPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g-~~--g~~~~l~~L~G~FAf~i~D~~~~~l~~ 146 (231)
++++++|||+|+|+.+||++|.. +++++|+++++++|.+....+ .| ++.+++++|+|+|||++++. ++|++
T Consensus 128 g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVi~~li~~~~~~~~~~~eai~~~~~~l~G~ya~vi~~~--~~l~a 205 (500)
T PRK07349 128 GPLALAHNGNLVNTVELREELLARGCELTTTTDSEMIAFAIAQAVDAGKDWLEAAISAFQRCQGAFSLVIGTP--EGLMG 205 (500)
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhhhEEEEEEeC--CEEEE
Confidence 78999999999999999999853 677888888889998644333 23 34578999999999999874 78999
Q ss_pred Ee-----ecEEEEEec---CCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEEC-C-C-CC-----CCCCCCC
Q 026882 147 AS-----VPLYWGITA---DGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN-P-K-NK-----ITAVPAA 210 (231)
Q Consensus 147 aR-----kPLyyg~~~---~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~-~-~-~~-----~~~~~r~ 210 (231)
+| ||||||... ++.++||||.+||.....+.+++++||+++++++++++.+.. + . .. ..||+|+
T Consensus 206 aRDp~GiRPL~~G~~~~~~~~~~~~ASE~~Al~~lg~~~ir~v~PGeiv~i~~~g~~~~~~~~~~~~~~C~fE~vYfarp 285 (500)
T PRK07349 206 VRDPNGIRPLVIGTLGEGGPGRYVLASETCALDIIGAEYLRDVEPGELVWITEGGLSSFHWAQEPQRKLCIFEMIYFARP 285 (500)
T ss_pred EECCCCCCCeEEEecccCCCCeEEEEeccchhhhcCCceEEEeCCCeEEEEECCceEEEecccCCCcceeEEEeeeccCC
Confidence 99 899999752 357999999999987766779999999999887777666532 1 1 12 2299999
Q ss_pred cceeeCce
Q 026882 211 EEEIWGAT 218 (231)
Q Consensus 211 ds~~~g~~ 218 (231)
||.++|.+
T Consensus 286 dS~~~g~~ 293 (500)
T PRK07349 286 DSRMHGES 293 (500)
T ss_pred CCccCCeE
Confidence 99999975
No 16
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=99.98 E-value=3.3e-31 Score=249.21 Aligned_cols=193 Identities=11% Similarity=0.120 Sum_probs=153.1
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC----------------------------CcEEEEEee---CC--CCCCCCCeee--
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTH---QN--ESPLRQRSFA-- 71 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~lgh~r---~~--~~~~~QP~~~-- 71 (231)
...+-.++.+|+|||+|+.|+... ++++|||+| .. ...+.||+..
T Consensus 24 ~~~~~~gL~~LqHRGqdsaGIa~~d~~~i~~~K~~Glv~~vf~~~~~l~~l~G~~~IGH~RysT~G~~~~~naqP~~~~~ 103 (484)
T PRK07272 24 AQLTYFGLHSLQHRGQEGAGIVSNDNGKLKGHRDLGLLSEVFKDPADLDKLTGQAAIGHVRYATAGSASIENIQPFLFHF 103 (484)
T ss_pred HHHHHHHHHHhcccCCccceEEEEeCCeeEEEecCCcccchhcchhhHhcCCCcEEEEEeeccccCCCCcCCCCCEEeec
Confidence 345778899999999999998651 458999999 12 2367999976
Q ss_pred eCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEE
Q 026882 72 VKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (231)
Q Consensus 72 ~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~ 146 (231)
.+++++++|||+|+|+.+||++|.. +++++|+++++++|.+...... ..+.+++++|+|+|||++++. ++|++
T Consensus 104 ~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVI~~Li~~~~~~~~~eai~~~~~~l~G~ya~~i~~~--~~l~a 181 (484)
T PRK07272 104 HDMQFGLAHNGNLTNAVSLRKELEKQGAIFHSSSDTEILMHLIRRSHNPTFMGKLKEALNTVKGGFAYLLLTE--DKLIA 181 (484)
T ss_pred CCCCEEEEEEEEEeCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHccCceeEEEEEC--CEEEE
Confidence 4588999999999999999999853 6778888888899986322110 134578999999999999985 78999
Q ss_pred Ee-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEE--ECCCC------CCCCCCCCcce
Q 026882 147 AS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSF--ENPKN------KITAVPAAEEE 213 (231)
Q Consensus 147 aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y--~~~~~------~~~~~~r~ds~ 213 (231)
+| ||||||..+++.++||||.+||...+.+.+++++||++++++.++++.+ ..+.. +.-||+|+||.
T Consensus 182 ~RDp~GirPL~~G~~~~~~~~~ASE~~Al~~ig~~~ir~l~PGEiv~i~~~g~~~~~~~~~~~~~~C~FE~vYfarpds~ 261 (484)
T PRK07272 182 ALDPNGFRPLSIGKMKNGAYVVASETCAFDVVGAEWVRDVQPGEIVIIDDEGIQYDSYTTDTQLAICSMEYIYFARPDST 261 (484)
T ss_pred EECCCCCCcEEEEEecCCEEEEEECHHHHhccCCceEEEcCCCeEEEEECCceEEEEecCCccccccchhhhhhcCCccc
Confidence 99 9999998645679999999999887767799999999998877776654 22222 12299999999
Q ss_pred eeCceeEE
Q 026882 214 IWGATFKV 221 (231)
Q Consensus 214 ~~g~~~~~ 221 (231)
|.|.++..
T Consensus 262 i~g~~v~~ 269 (484)
T PRK07272 262 IHGVNVHT 269 (484)
T ss_pred cCCEEHHH
Confidence 99988753
No 17
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=99.98 E-value=4.1e-31 Score=246.47 Aligned_cols=187 Identities=16% Similarity=0.171 Sum_probs=148.0
Q ss_pred hhhHHHHHHHhHccCCCCcceEE--------------------------CCcEEEEEee---CCCCCCCCCeeee--CCc
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV--------------------------GDNVTLAYTH---QNESPLRQRSFAV--KDE 75 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~--------------------------~~~~~lgh~r---~~~~~~~QP~~~~--~~~ 75 (231)
...+..++.+|+|||+|+.|+.. .++++|||+| .+...+.||+... +++
T Consensus 16 ~~~l~~gL~~LqhRG~dsaGIa~~~~~~~~~K~~Glv~~vf~~~~~~~l~g~~~IGH~R~sT~G~~~~~QP~~~~~~~g~ 95 (442)
T PRK08341 16 PKKAYYALIALQHRGQEGAGISVWRHRIRTVKGHGLVSEVFKGGSLSRLKSNLAIGHVRYSTSGSLSEVQPLEVECCGYK 95 (442)
T ss_pred HHHHHHHHHHhhccCcccceEEEECCcEEEEecCCchhhhhcccccccCCCCEEEEEeeccccCCCcCcCCEEeecCCCC
Confidence 35678999999999999999854 3678999999 2334779998764 478
Q ss_pred EEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHh-ccCCC--ChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 76 IFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALR-DRAPY--PPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 76 ~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~-~~g~~--g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
++++|||+|+|+.+||++|.. +++++|+|++++++.... +.+.+ ++.+++++|+|+|||++++. ++++++|
T Consensus 96 ialvhNG~I~N~~eLr~~L~~~G~~F~s~sDtEVI~~li~~~~~~~~~~~~ai~~~~~~l~G~yal~i~~~--~~l~a~R 173 (442)
T PRK08341 96 IAIAHNGTLTNFLPLRRKYESRGVKFRSSVDTELIGISFLWHYSETGDEFEAMREVFNEVKGAYSVAILFD--GKIIVAR 173 (442)
T ss_pred EEEEEEEEEECHHHHHHHHHHcCCccCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHhccCceEEEEEEC--CEEEEEE
Confidence 999999999999999999853 677777778777764422 22221 33468899999999999985 7899999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECCCCC-------CCCCCCCcceeeC
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNK-------ITAVPAAEEEIWG 216 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~~~~-------~~~~~r~ds~~~g 216 (231)
||||||.. + .++||||.+||...+. .+++++||++++++.++++++.....+ ..||+|+||.+.|
T Consensus 174 D~~GirPL~~G~~-~-~~~~ASE~~Al~~~~~-~v~~l~PGeiv~i~~~g~~~~~~~~~~~~~C~fe~iYfarpds~~~g 250 (442)
T PRK08341 174 DPVGFRPLSYGEG-D-GHYFASEDSALRMFVN-EIRDVFPGEVFVVSEGEVESKVLAREKHHHCVFEYIYFARPDSVIDG 250 (442)
T ss_pred cCCCceEEEEEEC-C-EEEEEeCcHHHHhhCC-eEEEeCCCEEEEEECCceEEEeeccCCCccceEEEEEecCCccccCC
Confidence 99999974 4 4899999999998875 699999999998877777754322211 2399999999999
Q ss_pred ce
Q 026882 217 AT 218 (231)
Q Consensus 217 ~~ 218 (231)
.+
T Consensus 251 ~~ 252 (442)
T PRK08341 251 VS 252 (442)
T ss_pred cC
Confidence 74
No 18
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=99.98 E-value=4.9e-31 Score=247.65 Aligned_cols=188 Identities=13% Similarity=0.144 Sum_probs=150.0
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEeeC---C--CCCCCCCeee--eC
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTHQ---N--ESPLRQRSFA--VK 73 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r~---~--~~~~~QP~~~--~~ 73 (231)
..+..++.+|+|||+|+.|+.. .++++|||+|. . ...+.||+.. .+
T Consensus 25 ~~~~~gL~~LqhRG~dsaGia~~d~~~~~~~k~~GlV~~vf~~~~l~~l~g~~~IGHvRyaT~G~~~~~naqP~~~~~~~ 104 (471)
T PRK06781 25 QVSYYGLHSLQHRGQEGAGIVVNNGEKIVGHKGLGLISEVFSRGELEGLNGKSAIGHVRYATAGGSEVANVQPLLFRFSD 104 (471)
T ss_pred HHHHHHHHHhhCcCcCcceEEEEeCCEEEEEecCcchhhhcchhhHhcCCCCEEEEEeEcccCCCCCcCCCCCeEEecCC
Confidence 4566899999999999999863 24679999991 2 1367899864 35
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
++++++|||+|+|+++||++|.. +++++|+++++++|.+...... .++.+++++|+|+|||+++|. ++++++|
T Consensus 105 g~~alvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEvI~~Li~~~~~~~~~eai~~~~~~l~G~ya~vi~~~--~~l~aaR 182 (471)
T PRK06781 105 HSMALAHNGNLINAKMLRRELEAEGSIFQTSSDTEVLLHLIKRSTKDSLIESVKEALNKVKGAFAYLLLTG--NEMIVAL 182 (471)
T ss_pred CCEEEEEEEEEcCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCcEEEEEEEC--CEEEEEE
Confidence 78999999999999999999853 6778888888899986332110 134578999999999999995 7899999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECC--CC-CCC-----CCCCCcceee
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENP--KN-KIT-----AVPAAEEEIW 215 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~--~~-~~~-----~~~r~ds~~~ 215 (231)
||||||.. ++.++||||.+||.....+.+++++||++++++.++++.+.-+ .. ..+ ||+|+||.++
T Consensus 183 D~~GirPL~~g~~-~~~~~~ASE~~Al~~~g~~~ir~v~pGeiv~i~~~g~~~~~~~~~~~~~~C~fE~vYfarpds~~~ 261 (471)
T PRK06781 183 DPNGFRPLSIGKM-GDAYVVASETCAFDVVGATYIRDVEPGELLIINDEGIHVDRFTNEVDHAICSMEYIYFARPDSNIA 261 (471)
T ss_pred CCCCCCCeEEEEE-CCEEEEEECchHhhhcCCcEEEEeCCCEEEEEECCceEEEecCcCcccccceEEEEEecCCCceeC
Confidence 99999998 6789999999999877767799999999998877776654322 12 122 9999999999
Q ss_pred Cce
Q 026882 216 GAT 218 (231)
Q Consensus 216 g~~ 218 (231)
|.+
T Consensus 262 g~~ 264 (471)
T PRK06781 262 GIN 264 (471)
T ss_pred CEE
Confidence 976
No 19
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=99.98 E-value=6.5e-31 Score=248.44 Aligned_cols=188 Identities=18% Similarity=0.195 Sum_probs=149.1
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEeeC---CC--CCCCCCeeee---
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTHQ---NE--SPLRQRSFAV--- 72 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r~---~~--~~~~QP~~~~--- 72 (231)
..+-.++.+|+|||+|+.|+.. .++++|||+|. +. ..+.||+...
T Consensus 38 ~~~~~gL~~LqHRGqdsaGIa~~d~~~i~~~K~~Glv~~vf~d~~l~~l~G~i~IGHvR~sT~G~~~~~naQP~~~~~~~ 117 (510)
T PRK07847 38 KLTYYGLYALQHRGQEAAGIAVSDGSQILVFKDLGLVSQVFDEQTLASLQGHVAIGHCRYSTTGASTWENAQPTFRATAA 117 (510)
T ss_pred HHHHHHHHHHhhhCcCcccEEEEeCCEEEEEecCccHHHhhchhhhhhcCCcEEEEeccCCcCCCCcccCCCCcCcccCC
Confidence 3456889999999999999854 23579999992 11 2579998752
Q ss_pred CCcEEEEEeeEEcchHHHHHHhCc---------CCCCcHHHHHHHHHHHHhccCCC--ChHHHHhccccceEEEEEECCC
Q 026882 73 KDEIFCLFEGALDNLGSLRQQYGL---------AKSANEVILVIEAYKALRDRAPY--PPNHVVGHLSGYFAFIVYDKST 141 (231)
Q Consensus 73 ~~~~~lv~nGeI~N~~eL~~~l~~---------~~~d~e~~li~~ly~~~~~~g~~--g~~~~l~~L~G~FAf~i~D~~~ 141 (231)
.++++++|||+|+|+++|+++|.. +++++|++++++++.+..+.+.+ .+.+++++|+|+|||+++|.
T Consensus 118 ~g~ialvHNG~I~N~~eLr~~L~~~G~~~~~~~f~s~sDSEVI~~Li~~~~~~~~~~eai~~~~~~l~G~yA~vi~d~-- 195 (510)
T PRK07847 118 GGGVALGHNGNLVNTAELAARARDRGLIRGRDPAGATTDTDLVTALLAHGAADSTLEQAALELLPTVRGAFCLVFMDE-- 195 (510)
T ss_pred CCCEEEEEEEEEeCHHHHHHHHHhcCCccccCCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHhhhheEEEEEEC--
Confidence 678999999999999999999842 46788888888999874322211 23478999999999999995
Q ss_pred CEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEE--EECCCCCCC-----CCCC
Q 026882 142 STLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRS--FENPKNKIT-----AVPA 209 (231)
Q Consensus 142 ~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~--y~~~~~~~~-----~~~r 209 (231)
++|+++| |||||+.. ++.++||||.+||.....+.|++++||++++++.++++. |+.+....+ ||+|
T Consensus 196 ~~L~aaRDp~GirPL~~g~~-~~~~~vASE~~AL~~~g~~~ir~v~PGeiv~I~~~gv~~~~~~~~~~~~C~fE~vYfar 274 (510)
T PRK07847 196 HTLYAARDPQGVRPLVLGRL-ERGWVVASETAALDIVGASFVREIEPGELIAIDADGLRSTRFAEPTPKGCVFEYVYLAR 274 (510)
T ss_pred CEEEEEECCCCCCCcEEEEE-CCeEEEEechHHHhccCCcEEEEECcCEEEEEECCceEEEeccCCCCCCCeEEEEEecC
Confidence 6899999 99999998 678999999999988755679999999999887666554 444322223 9999
Q ss_pred CcceeeCce
Q 026882 210 AEEEIWGAT 218 (231)
Q Consensus 210 ~ds~~~g~~ 218 (231)
+||.|+|.+
T Consensus 275 pdS~~~g~~ 283 (510)
T PRK07847 275 PDTTIAGRS 283 (510)
T ss_pred CcceeCCeE
Confidence 999999976
No 20
>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=99.97 E-value=2.7e-32 Score=247.19 Aligned_cols=173 Identities=22% Similarity=0.380 Sum_probs=151.7
Q ss_pred chhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc--CCCC
Q 026882 26 PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL--AKSA 100 (231)
Q Consensus 26 ~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~--~~~d 100 (231)
.+....++...++|||||.++..+.+...++|.| +++..+.||++..++.+++.+|||||||.+||+.+.. .++-
T Consensus 16 ~~~~~l~ls~~~~hRgpd~sg~~~~~~~~l~heRLAIvdp~sg~QPi~~~~~~~~~~vNGEIYNH~~Lr~~~~~~~~~T~ 95 (543)
T KOG0571|consen 16 KKPKALELSRRIRHRGPDWSGLAQRNDNILGHERLAIVDPTSGAQPIVGEDGTYVVTVNGEIYNHKKLREHCKDFEFQTG 95 (543)
T ss_pred cChhhhhHHHhhcCCCCCcchhheeccccccccceeEecCCcCCcccccCCCcEEEEECceeccHHHHHHHhhhcccccC
Confidence 3445567788999999999999988777999999 6778899999998889989999999999999998873 4444
Q ss_pred cHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhcc
Q 026882 101 NEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACG 175 (231)
Q Consensus 101 ~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~ 175 (231)
+|.++|+++|++ .|..+++..|+|+|||+++|.++.++++|| +|||||++.+++++||||.|+|...|.
T Consensus 96 sDcEvIi~lY~k------hg~~~~~~~LDG~Fafvl~d~~~~kv~~aRDpiGv~~lY~g~~~~gs~~~aSe~k~l~d~C~ 169 (543)
T KOG0571|consen 96 SDCEVIIHLYEK------HGGEQAICMLDGVFAFVLLDTKDDKVVAARDPIGVTPLYYGWDSDGSVYFASEMKCLEDDCE 169 (543)
T ss_pred CCceeeeehHhh------cCchhHHHHhhhheEEEEecCCCCeEEeccCCcCceeeEEEecCCCcEEEeeehhhhhhhhh
Confidence 455566699997 434689999999999999999999999999 999999998899999999999999996
Q ss_pred CceEEeCCCeEEEEeCCcEEEEECCCCCCC
Q 026882 176 KSLASFPQGCFFSTAVGGLRSFENPKNKIT 205 (231)
Q Consensus 176 ~~v~~~ppG~~~~~~~~~~~~y~~~~~~~~ 205 (231)
+ +..|||||+|.++.+++.+|++|.|..+
T Consensus 170 ~-i~~fpPgh~y~~~~~~~~r~f~p~w~~~ 198 (543)
T KOG0571|consen 170 K-IESFPPGHYYTSKTGKLTRYFNPEWFDE 198 (543)
T ss_pred c-eeecCCcceeecccccccCCCCchhhhc
Confidence 5 9999999999998889999999998544
No 21
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=99.97 E-value=1.9e-30 Score=244.29 Aligned_cols=189 Identities=14% Similarity=0.134 Sum_probs=149.3
Q ss_pred hhhHHHHHHHhHccCCCCcceEE----------------------------CCcEEEEEee---CC--CCCCCCCeeee-
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV----------------------------GDNVTLAYTH---QN--ESPLRQRSFAV- 72 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~----------------------------~~~~~lgh~r---~~--~~~~~QP~~~~- 72 (231)
...+..++.+|+|||+|+.|+.. .++++|||+| .+ ...+.||+...
T Consensus 34 ~~~~~~gL~~LqHRG~dsaGia~~~~~~~~~~k~~Glv~~vf~~~~~l~~l~G~~~IGH~R~sT~G~~~~~n~QP~~~~~ 113 (479)
T PRK09123 34 AALTALGLHALQHRGQEAAGIVSFDGERFHSERRMGLVGDHFTDADVIARLPGNRAIGHVRYSTTGETILRNVQPLFAEL 113 (479)
T ss_pred HHHHHHHHHHhcCcCccCCEEEEEECCEEEEEecCcchhhhhhhhhhhhccCCCEEEEEEecccCCCCCcCCCCCceeec
Confidence 34677889999999999999864 1357999999 22 23778999763
Q ss_pred -CCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEE
Q 026882 73 -KDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (231)
Q Consensus 73 -~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~ 146 (231)
+++++++|||+|+|+.+||++|.. +++++|+++++++|.+...... ..+.+++++|+|+|||++|+. +++++
T Consensus 114 ~~g~~alvhNG~I~N~~eLr~~L~~~G~~f~s~sDSEvi~~Li~~~~~~~~~eai~~~~~~L~G~ya~vil~~--~~l~a 191 (479)
T PRK09123 114 EFGGLAIAHNGNLTNALTLRRELIRRGAIFQSTSDTEVILHLIARSRKASFLDRFIDALRQVEGAYSLVALTN--TKLIG 191 (479)
T ss_pred CCCCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHhhcceeEEEEEC--CEEEE
Confidence 578999999999999999999853 6777888888899986322110 023578999999999999995 68999
Q ss_pred Ee-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCc-EEEEECCC---CC-----CCCCCCCcc
Q 026882 147 AS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG-LRSFENPK---NK-----ITAVPAAEE 212 (231)
Q Consensus 147 aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~-~~~y~~~~---~~-----~~~~~r~ds 212 (231)
+| ||||||.. ++.++||||.+||.....+.+++++||++++++..+ ++++.... .. .-||+|+||
T Consensus 192 ~RD~~GirPL~~g~~-~~~~~~ASE~~Al~~~g~~~~r~v~pGeiv~i~~~g~~~~~~~~~~~~~~~C~FE~VYfarPdS 270 (479)
T PRK09123 192 ARDPLGIRPLVLGEL-DGSPILASETCALDIIGAEFVRDVEPGELVVIDEDGSIESIKPFPPQPARFCIFEYVYFARPDS 270 (479)
T ss_pred EECCCCCCceEEEEE-CCEEEEEECchHHhccCCceEEEECCCeEEEEeCCCcEEEEEecCCCCCCCChhheEEecCCCc
Confidence 99 99999987 678999999999987655679999999998876555 76643211 11 229999999
Q ss_pred eeeCce
Q 026882 213 EIWGAT 218 (231)
Q Consensus 213 ~~~g~~ 218 (231)
.|+|.+
T Consensus 271 ~~~g~~ 276 (479)
T PRK09123 271 VVGGRS 276 (479)
T ss_pred eECCeE
Confidence 999976
No 22
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=99.97 E-value=3.5e-30 Score=242.18 Aligned_cols=189 Identities=11% Similarity=0.132 Sum_probs=150.6
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee---CC--CCCCCCCeeee--C
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH---QN--ESPLRQRSFAV--K 73 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r---~~--~~~~~QP~~~~--~ 73 (231)
..+-.++.+|+|||+|+.|+.. .++++|||+| .. ...+.||+... +
T Consensus 30 ~~~~~gL~~LqhRG~dsaGIa~~~~~~~~~~k~~G~v~~~f~~~~l~~l~g~~~iGHvR~sT~G~~~~~n~qPf~~~~~~ 109 (469)
T PRK05793 30 SLTYYGLYALQHRGQESAGIAVSDGEKIKVHKGMGLVSEVFSKEKLKGLKGNSAIGHVRYSTTGASDLDNAQPLVANYKL 109 (469)
T ss_pred HHHHHHHHHHhhhCCCcceEEEEeCCEEEEEecccccccccchhhHhccCCcEEEEEeecccCCCCCCCCCCCeEeecCC
Confidence 4566789999999999999863 2468999999 11 13678999764 5
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
++++++|||+|+|+.+||++|.. +++.+|++++++++.+..+.+. .++.+++++|+|+|||++++. ++++++|
T Consensus 110 g~~alvhNG~I~N~~eLr~~L~~~g~~f~s~sDSEvi~~li~~~~~~~~~~ai~~~~~~l~G~ya~vi~~~--~~l~a~R 187 (469)
T PRK05793 110 GSIAIAHNGNLVNADVIRELLEDGGRIFQTSIDSEVILNLIARSAKKGLEKALVDAIQAIKGSYALVILTE--DKLIGVR 187 (469)
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHccCCHHHHHHHHHHHhhhhceEEEEEC--CEEEEEE
Confidence 78999999999999999999853 5677788888899987432211 134578999999999999985 7899999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECCC--C-CCC-----CCCCCcceee
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPK--N-KIT-----AVPAAEEEIW 215 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~~--~-~~~-----~~~r~ds~~~ 215 (231)
||||||.. ++.++||||.++|.....+.+++++|||+++++.+++..+.-.. . ..+ ||+|+||.|+
T Consensus 188 D~~GirPL~~g~~-~~~~~vASE~~al~~~g~~~~r~v~pGeiv~i~~~g~~~~~~~~~~~~~~C~fe~vYfarpds~~~ 266 (469)
T PRK05793 188 DPHGIRPLCLGKL-GDDYILSSESCALDTIGAEFIRDVEPGEIVIIDEDGIKSIKFAEKTKCQTCAFEYIYFARPDSVID 266 (469)
T ss_pred CCCCCCCcEEEEE-CCEEEEEEChHHHhhcCcceEEEeCCCeEEEEECCceEEEecCcCccccccEEEEEEeccCCcccC
Confidence 89999998 67899999999998877677999999999988777766654221 1 122 9999999999
Q ss_pred Ccee
Q 026882 216 GATF 219 (231)
Q Consensus 216 g~~~ 219 (231)
|.+=
T Consensus 267 g~~v 270 (469)
T PRK05793 267 GISV 270 (469)
T ss_pred CeEh
Confidence 9763
No 23
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type. This domain is found at the N-terminus of glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) . The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. GPATase crystalizes as a homotetramer, but can also exist as a homdimer.
Probab=99.97 E-value=1.8e-29 Score=220.02 Aligned_cols=187 Identities=11% Similarity=0.101 Sum_probs=145.2
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC---------------------------CcEEEEEee--CC-C--CCCCCCeee--e
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTH--QN-E--SPLRQRSFA--V 72 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~lgh~r--~~-~--~~~~QP~~~--~ 72 (231)
...+..|++.|+|||||+.++... +.++|||+| +. . ..+.||+.. .
T Consensus 13 ~~~~~~~l~~l~~RG~D~~Gi~~~d~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~lgH~R~at~g~~~~~n~qPf~~~~~ 92 (252)
T cd00715 13 ARLTYLGLYALQHRGQESAGIATSDGKRFHTHKGMGLVSDVFDEEKLRRLPGNIAIGHVRYSTAGSSSLENAQPFVVNSP 92 (252)
T ss_pred HHHHHHHHHHHhccCcceeEEEEEeCCEEEEEecCCcHHHhhcccchhhCCCcEEEEEEEcccCCCCCccCCCCcEEecC
Confidence 456779999999999999998642 347999999 22 1 367899875 2
Q ss_pred CCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCC--ChHHHHhccccceEEEEEECCCCEEEE
Q 026882 73 KDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPY--PPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (231)
Q Consensus 73 ~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~--g~~~~l~~L~G~FAf~i~D~~~~~l~~ 146 (231)
.++++++|||+|+|+++|+++|.. ..+++|.++++++|.++.+.+.+ .+.+++++|+|+|||+++|. +++++
T Consensus 93 ~~~~~~~hNG~I~n~~~L~~~l~~~g~~~~~~tDSEvi~~l~~~~~~~~~~~~al~~~~~~l~G~~a~~~~d~--~~l~~ 170 (252)
T cd00715 93 LGGIALAHNGNLVNAKELREELEEEGRIFQTTSDSEVILHLIARSLAKDDLFEAIIDALERVKGAYSLVIMTA--DGLIA 170 (252)
T ss_pred CCcEEEEEEEEECCHHHHHHHHHHCCCcccCCCHHHHHHHHHHHhhccCCHHHHHHHHHHhccCceEEEEEEC--CEEEE
Confidence 478999999999999999999852 45677777888999874332111 23478999999999999997 88999
Q ss_pred Ee-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECC-CC--CCC-----CCCCCcce
Q 026882 147 AS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENP-KN--KIT-----AVPAAEEE 213 (231)
Q Consensus 147 aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~-~~--~~~-----~~~r~ds~ 213 (231)
+| +||||+...++.++||||.++|.....+.++++|||++++++.+++..+... .. +.+ |++|+||+
T Consensus 171 ~RD~~G~~PL~~~~~~~~~~~vASE~~al~~~~~~~~~~l~pg~~~~i~~~~~~~~~~~~~~~~~~c~~e~~y~~~~~~~ 250 (252)
T cd00715 171 VRDPHGIRPLVLGKLEGDGYVVASESCALDIIGAEFVRDVEPGEIVVIDDDGLESSQRAPKPKPAPCIFEYVYFARPDSV 250 (252)
T ss_pred EECCCCCCCeEEEEeCCCeEEEEECHHHhcccCCcEEEEcCCCeEEEEECCceEEEEecCCCCCCcceEEEEeecCCccc
Confidence 99 9999998743889999999999886445699999999998876665554221 11 222 99999998
Q ss_pred ee
Q 026882 214 IW 215 (231)
Q Consensus 214 ~~ 215 (231)
|+
T Consensus 251 ~~ 252 (252)
T cd00715 251 ID 252 (252)
T ss_pred cC
Confidence 64
No 24
>PLN02440 amidophosphoribosyltransferase
Probab=99.97 E-value=1.3e-29 Score=238.80 Aligned_cols=189 Identities=13% Similarity=0.113 Sum_probs=148.4
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee--C-C--CCCCCCCeeee--C
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH--Q-N--ESPLRQRSFAV--K 73 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r--~-~--~~~~~QP~~~~--~ 73 (231)
..+..|+.+|+|||+|+.++.. .++++|||+| + . ...+.||+... .
T Consensus 15 ~~~~~~L~~LqHRGqds~Gi~~~d~~~~~~~k~~Glv~~vf~~~~l~~l~g~~~IGHvRysT~G~~~~~n~QPf~~~~~~ 94 (479)
T PLN02440 15 RLCYLGLHALQHRGQEGAGIVTVDGNRLQSITGNGLVSDVFDESKLDQLPGDIAIGHVRYSTAGASSLKNVQPFVANYRF 94 (479)
T ss_pred HHHHHHHHHHHhhCcccceEEEEcCCEEEEEecCCchhhhcchhhhhccCCcEEEEEEeccccCCCCccCCCCceeecCC
Confidence 5677899999999999999865 4568999999 1 1 13789998753 4
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
++++++|||+|+|+++|+++|.. +++.+|+++++++|.+...... ..+.+++++|+|+|||++||. ++|+++|
T Consensus 95 g~~~lahNG~I~N~~eLr~~L~~~g~~f~s~sDsEvi~~li~~~~~~~~~~a~~~~~~~l~G~fa~vi~~~--~~l~a~R 172 (479)
T PLN02440 95 GSIGVAHNGNLVNYEELRAKLEENGSIFNTSSDTEVLLHLIAISKARPFFSRIVDACEKLKGAYSMVFLTE--DKLVAVR 172 (479)
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhhhhhHHHHHHHHHHHhccceeeeEEEC--CEEEEEE
Confidence 77999999999999999999853 5677888888899976321111 023578999999999999995 5799999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEE---CCCC-C-----CCCCCCCccee
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFE---NPKN-K-----ITAVPAAEEEI 214 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~---~~~~-~-----~~~~~r~ds~~ 214 (231)
|||||+...++.++||||.+||.....+.+++++||++++++++++.+.. .... . .-||.|+||.+
T Consensus 173 D~~G~RPL~~g~~~~~~~~vASE~~al~~~g~~~ir~v~PGeiv~i~~~g~~~~~~~~~~~~~~~C~fe~vYf~~p~s~~ 252 (479)
T PLN02440 173 DPHGFRPLVMGRRSNGAVVFASETCALDLIGATYEREVNPGEVIVVDKDKGVSSQCLMPHPEPKPCIFEHIYFARPNSIV 252 (479)
T ss_pred CCCCCCceEEEEeCCCEEEEEECchHHhccCCcEEEEeCCCeEEEEECCCcEEEeeccCCCCcccceEEEEeecCCCccc
Confidence 99999976467899999999999886677999999999988766633321 1121 1 22899999998
Q ss_pred eCce
Q 026882 215 WGAT 218 (231)
Q Consensus 215 ~g~~ 218 (231)
.|.+
T Consensus 253 ~g~~ 256 (479)
T PLN02440 253 FGRS 256 (479)
T ss_pred cCeE
Confidence 8864
No 25
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=99.97 E-value=2.4e-29 Score=235.17 Aligned_cols=189 Identities=15% Similarity=0.112 Sum_probs=149.0
Q ss_pred hhhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee--CC---CCCCCCCeee-eC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH--QN---ESPLRQRSFA-VK 73 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r--~~---~~~~~QP~~~-~~ 73 (231)
...+..|+.+|+|||+|+.++.. .++++|||+| +. ...+.||+.. ..
T Consensus 14 ~~~~~~~L~~lqhRG~ds~Gia~~d~~~~~~~k~~glv~~v~~~~~l~~l~g~~~IgHvR~aT~G~~~~~n~QPf~~~~~ 93 (442)
T TIGR01134 14 ASLTYYGLYALQHRGQEAAGIAVSDGNKIRTHKGNGLVSDVFDERHLERLKGNVGIGHVRYSTAGSSSLSNAQPFVVNSP 93 (442)
T ss_pred HHHHHHHHHHHHhhCccceEEEEEeCCEEEEEEcCCchhhhcchhhhhcccCcEEEEEEEecCCCCCCccCCCCEEEeCC
Confidence 35677899999999999999964 3568999999 21 1367899874 33
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhcc-CC--CChHHHHhccccceEEEEEECCCCEEEE
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDR-AP--YPPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~-g~--~g~~~~l~~L~G~FAf~i~D~~~~~l~~ 146 (231)
++++++|||+|+|+++|+++|.. +++.+|+++++++|.++... +. .++.+++++|+|+|||+++| .+++++
T Consensus 94 ~g~alahNG~I~N~~eLr~~L~~~g~~f~~~sDSEvi~~li~~~~~~~~~~~~ai~~~~~~l~G~falvi~~--~~~L~a 171 (442)
T TIGR01134 94 GGIALAHNGNLVNAEELREELEEEGRIFNTTSDSEVLLHLLARERLEEDDLFEAIARVLKRVRGAYALVIMI--GDGLIA 171 (442)
T ss_pred CCEEEEEEEEEcCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhhcccCCHHHHHHHHHHHhCccceEEEEE--CCEEEE
Confidence 56999999999999999999853 56777888888999874211 11 12357899999999999997 478999
Q ss_pred Ee-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECCCCC--CC-----CCCCCccee
Q 026882 147 AS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNK--IT-----AVPAAEEEI 214 (231)
Q Consensus 147 aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~~~~--~~-----~~~r~ds~~ 214 (231)
+| |||||+.. ++.++||||.++|.....+.|++++||+++++++++++++.-...+ .+ ||+|+||.|
T Consensus 172 ~RD~~G~rPL~~g~~-~~~~~~ASE~~al~~~g~~~~r~v~pGeiv~i~~~~~~~~~~~~~~~~~c~fe~vYfarpds~~ 250 (442)
T TIGR01134 172 VRDPHGIRPLVLGKR-GDGYVVASESCALDILGAEFIRDVEPGEAVVIDDGGLESRLFANTPRAPCIFEYVYFARPDSVI 250 (442)
T ss_pred EECCCCCCCcEEEEe-CCEEEEEeCchHhcccCCcEEEEECCCeEEEEECCcEEEEeccCCCCcceEEEEEEecCCcceE
Confidence 99 99999987 6789999999999865556799999999998877777664322221 12 999999999
Q ss_pred eCce
Q 026882 215 WGAT 218 (231)
Q Consensus 215 ~g~~ 218 (231)
.|.+
T Consensus 251 ~g~~ 254 (442)
T TIGR01134 251 DGIS 254 (442)
T ss_pred CCeE
Confidence 9975
No 26
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed
Probab=99.97 E-value=1.1e-29 Score=245.53 Aligned_cols=170 Identities=16% Similarity=0.205 Sum_probs=141.3
Q ss_pred hhhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee---CCC--CCCCCCeeeeCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH---QNE--SPLRQRSFAVKD 74 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r---~~~--~~~~QP~~~~~~ 74 (231)
...+..|+.+++|||||+.|++. .++++|||+| .+. ..+.||+.+.++
T Consensus 14 ~~~~~~~l~~l~hRG~d~~Gi~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~g~~~igH~R~at~g~~~~~n~qP~~~~~~ 93 (604)
T PRK00331 14 AEILLEGLKRLEYRGYDSAGIAVLDDGGLEVRKAVGKVANLEAKLEEEPLPGTTGIGHTRWATHGKPTERNAHPHTDCSG 93 (604)
T ss_pred HHHHHHHHHHHhccCcCcceEEEEeCCEEEEEECCcCHHHHHhhhccccCCCcEEEEEEecCCCCCCccccCCccccCCC
Confidence 35677899999999999999976 4568999999 222 367899987778
Q ss_pred cEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC---CChHHHHhccccceEEEEEECCC-CEEEE
Q 026882 75 EIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-STLFV 146 (231)
Q Consensus 75 ~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~---~g~~~~l~~L~G~FAf~i~D~~~-~~l~~ 146 (231)
+++++|||+|||+++||++|.. ..+++|+++++++|.++.+.|. .++++++++|+|+|||++||..+ +++++
T Consensus 94 ~~~~vhNG~I~N~~~Lr~~l~~~g~~~~~~sDsEvi~~l~~~~~~~g~~~~~a~~~~~~~l~G~~a~~~~d~~~~~~l~~ 173 (604)
T PRK00331 94 RIAVVHNGIIENYAELKEELLAKGHVFKSETDTEVIAHLIEEELKEGGDLLEAVRKALKRLEGAYALAVIDKDEPDTIVA 173 (604)
T ss_pred CEEEEEeEEEcCHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHhccCeeEEEEEecCCCCEEEE
Confidence 9999999999999999999853 5677788888899987544331 12357999999999999999886 89999
Q ss_pred Ee--ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEE
Q 026882 147 AS--VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFE 198 (231)
Q Consensus 147 aR--kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~ 198 (231)
+| |||||+.. ++.++||||+++|...+. .+++|+||+++++..++++.+.
T Consensus 174 ~Rd~~PL~~g~~-~~~~~~aSE~~al~~~~~-~~~~l~pg~~~~i~~~~~~~~~ 225 (604)
T PRK00331 174 ARNGSPLVIGLG-EGENFLASDALALLPYTR-RVIYLEDGEIAVLTRDGVEIFD 225 (604)
T ss_pred EECCCceEEEEc-CCeEEEEECHHHHHHhcC-EEEEECCCeEEEEECCeEEEEe
Confidence 99 99999987 678999999999999885 5899999999887656665553
No 27
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing). The member from Methanococcus jannaschii contains an intein.
Probab=99.97 E-value=6.6e-30 Score=247.19 Aligned_cols=169 Identities=17% Similarity=0.209 Sum_probs=140.4
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee---CCC--CCCCCCeeeeCCc
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH---QNE--SPLRQRSFAVKDE 75 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r---~~~--~~~~QP~~~~~~~ 75 (231)
..+..|+.+|+|||||+.|++. .+.++|||+| .+. ..+.||+...+++
T Consensus 14 ~~~~~~l~~l~hRG~ds~Gi~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~~~~~ 93 (607)
T TIGR01135 14 PILLEGLKRLEYRGYDSAGIAVVDEGKLFVRKAVGKVQELANKLGEKPLPGGVGIGHTRWATHGKPTEENAHPHTDEGGR 93 (607)
T ss_pred HHHHHHHHHHhccCcccceEEEEeCCEEEEEECCcCHHHHHhhhhcccCCccEEEEEeeccCCCCCCccCCCCcCcCCCC
Confidence 5678999999999999999986 4567999999 222 3678999887788
Q ss_pred EEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC---CChHHHHhccccceEEEEEECCC-CEEEEE
Q 026882 76 IFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-STLFVA 147 (231)
Q Consensus 76 ~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~---~g~~~~l~~L~G~FAf~i~D~~~-~~l~~a 147 (231)
++++|||+|||+++||++|.. ..+++|+++++++|.++.+.+. .++.+++++|+|+|||++||..+ ++++++
T Consensus 94 ~~~vhNG~I~N~~~Lr~~L~~~g~~~~~~tDsEvi~~l~~~~~~~~~~~~~ai~~~~~~l~G~~a~~i~~~~~~~~l~~~ 173 (607)
T TIGR01135 94 IAVVHNGIIENYAELREELEARGHVFVSDTDTEVIAHLIEEYLREGGDLLEAVQKALKQLRGAYALAVLHADHPETLVAA 173 (607)
T ss_pred EEEEEecccCCHHHHHHHHHhCCCccccCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcCceEEEEEecCCCCEEEEE
Confidence 999999999999999999852 5677788888899987544321 13457999999999999999875 569999
Q ss_pred e--ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEE
Q 026882 148 S--VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFE 198 (231)
Q Consensus 148 R--kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~ 198 (231)
| |||||+.. ++.++||||+++|...+. .+.+++||+++..+.+++..+.
T Consensus 174 Rd~~PL~~~~~-~~~~~~aSE~~al~~~~~-~~~~l~pg~~~~~~~~~~~~~~ 224 (607)
T TIGR01135 174 RSGSPLIVGLG-DGENFVASDVTALLPVTR-RVIYLEDGDIAILTRDGVRIYN 224 (607)
T ss_pred ECCCceEEEEC-CCeEEEEEChHHHHhhCC-EEEEeCCCeEEEEECCeeEEEe
Confidence 9 99999987 678999999999999885 5889999999987666666553
No 28
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=99.97 E-value=1.5e-29 Score=239.63 Aligned_cols=192 Identities=14% Similarity=0.138 Sum_probs=148.9
Q ss_pred hhHHHHHHHhHccCCCCcceEE---------------------------CCcEEEEEee---CCC--CCCCCCee-eeCC
Q 026882 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTH---QNE--SPLRQRSF-AVKD 74 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~lgh~r---~~~--~~~~QP~~-~~~~ 74 (231)
..+..|+.+|+|||||+.|++. .++++|||+| .+. ..+.||+. ....
T Consensus 15 ~~~~~~L~aLqHRGqdsaGi~~~~~~~~~~~k~~Glv~~vf~~~~l~~l~g~~~IGHvRysT~G~~~~~n~QP~~~~~~~ 94 (501)
T PRK09246 15 QSIYDALTVLQHRGQDAAGIVTIDGNRFRLRKANGLVRDVFRTRHMRRLQGNMGIGHVRYPTAGSSSSAEAQPFYVNSPY 94 (501)
T ss_pred HHHHHHHHHHhccCcceeEEEEEeCCEEEEEccCCccccccCcchHhhCCCCEEEEEEcCCcCCCCCcccCCCEEEeCCC
Confidence 4677899999999999999986 4688999999 221 36899987 3445
Q ss_pred cEEEEEeeEEcchHHHHHHhCc-----CCCCcHHHHHHHHHHHHhcc--C------C--CChHHHHhccccceEEEEEEC
Q 026882 75 EIFCLFEGALDNLGSLRQQYGL-----AKSANEVILVIEAYKALRDR--A------P--YPPNHVVGHLSGYFAFIVYDK 139 (231)
Q Consensus 75 ~~~lv~nGeI~N~~eL~~~l~~-----~~~d~e~~li~~ly~~~~~~--g------~--~g~~~~l~~L~G~FAf~i~D~ 139 (231)
+++++|||+|+|+++||++|.. +++++|+++++++|.++... | . .++.+++++|+|+|||+++..
T Consensus 95 g~alahNG~I~N~~eLr~~L~~~~~~~f~s~sDsEvi~~li~~~l~~~~g~~~~~~~l~eai~~~~~~l~Gays~v~~~~ 174 (501)
T PRK09246 95 GITLAHNGNLTNAEELRKELFEKDRRHINTTSDSEVLLNVFAHELQKFRGLPLTPEDIFAAVAAVHRRVRGAYAVVAMII 174 (501)
T ss_pred CEEEEEeEEEcCHHHHHHHHHhcCCCeeecCCHHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcccceeeEEEec
Confidence 6999999999999999998853 46777878888999864321 1 1 123478999999999998853
Q ss_pred CCCEEEEEe-----ecEEEEEec---CCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCc-EEEEE--C-CCCCCC--
Q 026882 140 STSTLFVAS-----VPLYWGITA---DGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG-LRSFE--N-PKNKIT-- 205 (231)
Q Consensus 140 ~~~~l~~aR-----kPLyyg~~~---~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~-~~~y~--~-~~~~~~-- 205 (231)
.++++++| ||||||... ++.++||||.+||.....+.+++++||+++++++++ ..+.. . +.+...
T Consensus 175 -~~~l~a~RDp~GirPL~~g~~~~~~~~~~~~ASE~~Al~~~g~~~ir~v~PGeiv~i~~~g~~~~~~~~~~~~~~~c~f 253 (501)
T PRK09246 175 -GHGLVAFRDPHGIRPLVLGKRETEGGTEYMVASESVALDALGFEFVRDVAPGEAIYITEDGQLHTRQCAENPKLNPCIF 253 (501)
T ss_pred -CCcEEEEECCCCCCCeEEEeecCCCCCEEEEEECHHHHHhCCceEEEEeCCCeEEEEECCCcEehhhhcCCCCCcceEE
Confidence 45799999 999999863 357999999999998777779999999998876655 43221 1 222222
Q ss_pred ---CCCCCcceeeCce-eE
Q 026882 206 ---AVPAAEEEIWGAT-FK 220 (231)
Q Consensus 206 ---~~~r~ds~~~g~~-~~ 220 (231)
|++|+||.|.|.+ |.
T Consensus 254 e~vY~~r~ds~i~g~~vy~ 272 (501)
T PRK09246 254 EYVYFARPDSIIDGISVYK 272 (501)
T ss_pred EEEEcCCchhhccCeeHHh
Confidence 8999999999997 54
No 29
>cd03766 Gn_AT_II_novel Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its function has not yet been determined. The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthet
Probab=99.96 E-value=1.8e-29 Score=210.32 Aligned_cols=150 Identities=15% Similarity=0.196 Sum_probs=121.6
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC----CcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCcCCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG----DNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGLAKS 99 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~~~~ 99 (231)
++.+.+|++.|+|||||+++++.. +++.++|+| .+...+.||+.+.+++++++|||+|||+.+|++ +
T Consensus 18 ~~~~~~m~~~l~hRGPD~~~~~~~~~~~~~~~l~~~rL~i~~~~~~~QP~~~~~~~~~lv~NGeIyN~~~l~~------s 91 (181)
T cd03766 18 SLLSEELLPNLRNRGPDYLSTRQLSVTNWTLLFTSSVLSLRGDHVTRQPLVDQSTGNVLQWNGELYNIDGVED------E 91 (181)
T ss_pred hhhHHHHHHHHHhcCCCccCCEEeeccccEEEEEeeEEEecCCCCCCCCCEeCCCCEEEEECCEEECcccccC------C
Confidence 466789999999999999999875 468999999 444567999988777899999999999999975 5
Q ss_pred CcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEec-CCeEEEEeChhhHhhh
Q 026882 100 ANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITA-DGHVAFADDADLLKGA 173 (231)
Q Consensus 100 d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~-~g~~~fASe~~aL~~~ 173 (231)
++|+++++++|+++.... .++.+++++|+|+|||++||..++++|++| |||||+... ++.++|||+.....
T Consensus 92 ~sDtEvi~~l~~~~g~~~-~~i~~~~~~L~G~fA~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~~~~l~~aS~~~~~~-- 168 (181)
T cd03766 92 ENDTEVIFELLANCSSES-QDILDVLSSIEGPFAFIYYDASENKLYFGRDCLGRRSLLYKLDPNGFELSISSVSGSSS-- 168 (181)
T ss_pred CCHHHHHHHHHHHHhhhH-HHHHHHHHhcccceEEEEEeCCCCEEEEEECCCCCcCcEEEeeCCCCcEEEEEccCCCC--
Confidence 677778889998721100 123489999999999999999889999999 999999875 68899999975331
Q ss_pred ccCceEEeCCCeE
Q 026882 174 CGKSLASFPQGCF 186 (231)
Q Consensus 174 ~~~~v~~~ppG~~ 186 (231)
. ..+.++||+-+
T Consensus 169 ~-~~~~e~~~~g~ 180 (181)
T cd03766 169 G-SGFQEVLAGGI 180 (181)
T ss_pred C-CceEECCCCcc
Confidence 1 24888888543
No 30
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-27 Score=232.78 Aligned_cols=170 Identities=14% Similarity=0.203 Sum_probs=139.7
Q ss_pred hhhHHHHHHHhHccCCCCcceEE-C---------------------------------CcEEEEEee---CCC--CCCCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV-G---------------------------------DNVTLAYTH---QNE--SPLRQ 67 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~-~---------------------------------~~~~lgh~r---~~~--~~~~Q 67 (231)
...+-.++.+|+|||+|+.|+.. + ++++|||+| .+. ..+.|
T Consensus 37 ~~~~~~~l~~L~hRG~ds~Gia~~~~~~~~~~~k~~g~g~v~~~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~q 116 (640)
T PTZ00295 37 SKILLEGIEILQNRGYDSCGISTISSGGELKTTKYASDGTTSDSIEILKEKLLDSHKNSTIGIAHTRWATHGGKTDENAH 116 (640)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEEeCCCcEEEEEeCCCCchHHHHHHHHHHhhcCCCCCcEEEEEeccccCCCCCcCCCC
Confidence 34577899999999999999976 1 235999999 222 36799
Q ss_pred CeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC---CChHHHHhccccceEEEEEECC
Q 026882 68 RSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKS 140 (231)
Q Consensus 68 P~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~---~g~~~~l~~L~G~FAf~i~D~~ 140 (231)
|+.+..++++++|||+|+|+++||++|.. +.+++|+++++++|.+..++|. .++.+++++|+|+|||++||..
T Consensus 117 P~~~~~~~~~~vhNG~I~N~~~Lr~~L~~~g~~f~s~tDsEvi~~li~~~~~~g~~~~~a~~~~~~~l~G~~a~~~~~~~ 196 (640)
T PTZ00295 117 PHCDYKKRIALVHNGTIENYVELKSELIAKGIKFRSETDSEVIANLIGLELDQGEDFQEAVKSAISRLQGTWGLCIIHKD 196 (640)
T ss_pred CCCCCCCCEEEEEEEEEcCHHHHHHHHHHCCCcccCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhhhceEEEEEeC
Confidence 99877789999999999999999999853 5677788888899875433331 1235789999999999999976
Q ss_pred -CCEEEEEe--ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEE
Q 026882 141 -TSTLFVAS--VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFE 198 (231)
Q Consensus 141 -~~~l~~aR--kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~ 198 (231)
.++++++| ||||||.. ++.++||||.++|...+.+ +..++||+++.++.++++.|.
T Consensus 197 ~~~~l~~~Rd~~PL~~g~~-~~~~~~aSE~~al~~~~~~-~~~l~pGei~~i~~~~~~~~~ 255 (640)
T PTZ00295 197 NPDSLIVARNGSPLLVGIG-DDSIYVASEPSAFAKYTNE-YISLKDGEIAELSLENVNDLY 255 (640)
T ss_pred CCCEEEEEECCCceEEEEc-CceEEEEechHHHHhhCcE-EEEeCCCeEEEEECCeEEEEe
Confidence 58999999 99999987 6789999999999998865 777999999988777788776
No 31
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=99.95 E-value=2.9e-27 Score=206.11 Aligned_cols=158 Identities=16% Similarity=0.112 Sum_probs=127.4
Q ss_pred chhhHHHHHHHhHccCC-CCcceEEC------------------------------------CcEEEEEeeC--C---CC
Q 026882 26 PKTTSTALVDRFLQTNS-SAVSVQVG------------------------------------DNVTLAYTHQ--N---ES 63 (231)
Q Consensus 26 ~~~~~~~m~~~l~~RGp-d~~~~~~~------------------------------------~~~~lgh~r~--~---~~ 63 (231)
....+-.|+.+|+|||+ |+.+++.. ++++|||+|. . ..
T Consensus 15 ~~~~~~~~l~~lqhRG~~dsaGia~~~~~~~~~~s~~~~~~~~K~~G~~~~v~~~~~~~~~~~~~~igH~R~aT~g~~~~ 94 (249)
T cd01907 15 VGALLVEMLDAMQERGPGDGAGFALYGDPDAFVYSSGKDMEVFKGVGYPEDIARRYDLEEYKGYHWIAHTRQPTNSAVWW 94 (249)
T ss_pred cHHHHHHHHHHHHhcCCCCCceEEEEcCCCeEEEecCCCeEEEeeccCHHHHHhhcCchheEEEEEEEEEeccCCCCCCc
Confidence 35677899999999999 99999763 4689999992 1 13
Q ss_pred CCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCC--------------------
Q 026882 64 PLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPY-------------------- 119 (231)
Q Consensus 64 ~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~-------------------- 119 (231)
.+.||+.. ++++++|||+|+|+.+||++|.. +.+++|+++++++|......+..
T Consensus 95 ~n~qP~~~--~~~~lvhNG~I~N~~~lr~~L~~~g~~~~~~sDsEvi~~ll~~~~~~~g~~~~a~~~~i~~~~~~~~~~~ 172 (249)
T cd01907 95 YGAHPFSI--GDIAVVHNGEISNYGSNREYLERFGYKFETETDTEVIAYYLDLLLRKGGLPLEYYKHIIRMPEEERELLL 172 (249)
T ss_pred cCCCCeec--CCEEEEeCCeecCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCChHHHHHHHhcCCHhHHHHHH
Confidence 58899875 48999999999999999999853 56777777888888754322212
Q ss_pred --ChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhc---cCceEEeCCCeEEE
Q 026882 120 --PPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGAC---GKSLASFPQGCFFS 188 (231)
Q Consensus 120 --g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~---~~~v~~~ppG~~~~ 188 (231)
.+..++++|+|+|||++++. +.++++| |||||+.. ++.++||||.++|...+ .+.+.+++||++++
T Consensus 173 ~~~~~~~~~~l~G~~a~~~~~~--~~~~~~RD~~G~rPL~~g~~-~~~~~~ASE~~al~~~~~~~~~~~~~l~pGe~v~ 248 (249)
T cd01907 173 ALRLTYRLADLDGPFTIIVGTP--DGFIVIRDRIKLRPAVVAET-DDYVAIASEECAIREIPDRDNAKVWEPRPGEYVI 248 (249)
T ss_pred HHHHHhCcccCCCCEEEEEEeC--CeEEEEecCCCCccEEEEEE-CCEEEEEEcHHHHhccCccchheEecCCCCceEe
Confidence 11257899999999999985 5689999 99999988 67899999999998774 45689999999875
No 32
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type. Carbapenam synthetase (CarA) is an ATP/Mg2+-dependent enzyme that catalyzes the formation of the beta-lactam ring in (5R)-carbapenem-3-carboxylic acid biosynthesis. CarA is homologous to beta-lactam synthetase (beta-LS), which is involved in the biosynthesis of clavulanic acid, a clinically important beta-lactamase inhibitor. CarA and beta-LS each have two distinct domains, an N-terminal Ntn hydrolase domain and a C-terminal synthetase domain, a domain architecture similar to that of the class-B asparagine synthetases (AS-B's). The N-terminal domain of these enzymes hydrolyzes glutamine to glutamate and ammonia. CarA forms a homotetramer while betaLS forms a heterodimer. The N-terminal folds of CarA and beta-LS are similar to those of other class II glutamine amidotransferases including lucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (
Probab=99.95 E-value=1e-26 Score=196.19 Aligned_cols=118 Identities=22% Similarity=0.282 Sum_probs=100.4
Q ss_pred CCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe
Q 026882 73 KDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS 148 (231)
Q Consensus 73 ~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR 148 (231)
.+++++++||||||+.+|+++|.. +.+.+|+++++++|++ ||. +++++|+|||||+|||.+ ++|++||
T Consensus 49 ~~~~~iv~NGEIYN~~eLr~~L~~~g~~f~t~sDtEvll~~y~~------~G~-~~l~~L~G~FAfai~D~~-~~L~laR 120 (199)
T cd01909 49 SETGTAYLIGELYNRDELRSLLGAGEGRSAVLGDAELLLLLLTR------LGL-HAFRLAEGDFCFFIEDGN-GRLTLAT 120 (199)
T ss_pred CCCEEEEEEEEEeCHHHHHHHHHhcCCCcCCCCHHHHHHHHHHH------HhH-HHHHHcCEEEEEEEEcCC-CEEEEEE
Confidence 357999999999999999999853 5778888899999998 885 899999999999999998 9999999
Q ss_pred -----ecEEEEEecCCeEEEEeChhhHhhhcc-----------------CceEEeCCCeEEEEeCC-------cEEEEEC
Q 026882 149 -----VPLYWGITADGHVAFADDADLLKGACG-----------------KSLASFPQGCFFSTAVG-------GLRSFEN 199 (231)
Q Consensus 149 -----kPLyyg~~~~g~~~fASe~~aL~~~~~-----------------~~v~~~ppG~~~~~~~~-------~~~~y~~ 199 (231)
|||||... +.++||||+|+|+.+.. +.|+.+||||+++.+.. ...+||.
T Consensus 121 Dr~GikPLYy~~~--~~l~FASEikaLla~~~~~~~~d~~~~~~~~T~~~gI~rL~PG~~l~~~~~g~~~~~~~~~~yW~ 198 (199)
T cd01909 121 DHAGSVPVYLVQA--GEVWATTELKLLAAHEGPKAFPFKSAGADTVSGLTGVQRVPPGTVNVLTFDGGSYGTAESRRTWT 198 (199)
T ss_pred CCCCCcCeEEEEC--CeEEEEeCHHHHhhCcCCCcccCcccCCCCCChhcCceEECCCcEEEEeeCCcccceEEEEEeec
Confidence 99999875 78999999999975421 46999999999865422 2557887
Q ss_pred C
Q 026882 200 P 200 (231)
Q Consensus 200 ~ 200 (231)
|
T Consensus 199 p 199 (199)
T cd01909 199 P 199 (199)
T ss_pred C
Confidence 5
No 33
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthetase B synthesizes asparagine from aspartate and glutamine. Beta-LS catalyzes the format
Probab=99.95 E-value=2.2e-26 Score=194.17 Aligned_cols=157 Identities=22% Similarity=0.336 Sum_probs=130.0
Q ss_pred HHHHHHhHccCCCCcceEECC---------------------------cEEEEEee--CC---CCCCCCCeeeeCCcEEE
Q 026882 31 TALVDRFLQTNSSAVSVQVGD---------------------------NVTLAYTH--QN---ESPLRQRSFAVKDEIFC 78 (231)
Q Consensus 31 ~~m~~~l~~RGpd~~~~~~~~---------------------------~~~lgh~r--~~---~~~~~QP~~~~~~~~~l 78 (231)
..|+..+.|||||+.+++... .++|||+| +. ...+.||+....+++++
T Consensus 21 ~~~~~~~~~rg~dg~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~R~at~g~~~~~n~hPf~~~~~~~~~ 100 (220)
T cd00352 21 LRGLAALEHRGPDGAGIAVYDGDGLFVEKRAGPVSDVALDLLDEPLKSGVALGHVRLATNGLPSEANAQPFRSEDGRIAL 100 (220)
T ss_pred HHHHHhhcccCCccCCeEEECCCceEEEEeccchhhhhhhhhhhccCCCEEEEEeEeeecCCCCCCCCCCcCcCCCCEEE
Confidence 579999999999999997643 78999999 21 24778998776678999
Q ss_pred EEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC--CChHHHHhccccceEEEEEECCCCEEEEEe----
Q 026882 79 LFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP--YPPNHVVGHLSGYFAFIVYDKSTSTLFVAS---- 148 (231)
Q Consensus 79 v~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~--~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR---- 148 (231)
+|||+|+|+++|++.|.. ..+.+|+++++++|.++.+.+. ..+.+++++++|.|+|+++|..+++++++|
T Consensus 101 ~hNG~i~n~~~l~~~l~~~~~~~~~~tDse~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~d~~~~~l~~~rd~~G 180 (220)
T cd00352 101 VHNGEIYNYRELREELEARGYRFEGESDSEVILHLLERLGREGGLFEAVEDALKRLDGPFAFALWDGKPDRLFAARDRFG 180 (220)
T ss_pred EECcEEEcHHHHHHHHHHCCCeecCCCHHHHHHHHHHHHhccCCHHHHHHHHHHhCCccEEEEEEECCCCEEEEEECCCC
Confidence 999999999999998763 5667777788899988432211 113588999999999999998889999999
Q ss_pred -ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEE
Q 026882 149 -VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFF 187 (231)
Q Consensus 149 -kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~ 187 (231)
+||||+...++.++||||..++...+.+.+.+++||+++
T Consensus 181 ~~pL~~~~~~~~~~~~aSe~~~~~~~~~~~~~~l~~g~~~ 220 (220)
T cd00352 181 IRPLYYGITKDGGLVFASEPKALLALPFKGVRRLPPGELL 220 (220)
T ss_pred CCCeEEEEeCCCeEEEEecHHHHhhcCcccEEECCCCCCC
Confidence 999999874578999999999988775569999999864
No 34
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=99.93 E-value=3.3e-25 Score=203.32 Aligned_cols=190 Identities=16% Similarity=0.158 Sum_probs=148.3
Q ss_pred hhhHHHHHHHhHccCCCCcceEE-CC---------------------------cEEEEEee-CC----CCCCCCCeeeeC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV-GD---------------------------NVTLAYTH-QN----ESPLRQRSFAVK 73 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~-~~---------------------------~~~lgh~r-~~----~~~~~QP~~~~~ 73 (231)
...+...+..|+|||.++.++.. ++ +++|||+| +. ...+.||++...
T Consensus 19 ~~~~y~gL~aLQHRGQeaAGI~~~dg~~~~~~K~~GLV~dvF~~~~~~~~l~G~~~IGHvRYsTaG~s~~~naQP~~~~~ 98 (470)
T COG0034 19 AQLTYYGLYALQHRGQEAAGIAVADGKRFHTHKGMGLVSDVFNERDLLRKLQGNVGIGHVRYSTAGSSSIENAQPFYVNS 98 (470)
T ss_pred HHHHHHHHHHHhhCCcccccEEEEcCceEEEEecCccchhhcCchhhhhhccCcceeeEeeecCCCCcccccccceEEec
Confidence 45677889999999999999954 22 45999999 21 236789987643
Q ss_pred --CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC--CChHHHHhccccceEEEEEECCCCEEE
Q 026882 74 --DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP--YPPNHVVGHLSGYFAFIVYDKSTSTLF 145 (231)
Q Consensus 74 --~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~--~g~~~~l~~L~G~FAf~i~D~~~~~l~ 145 (231)
+.++++|||.|.|..+||++|.. +++++|++++++++.+...... .+++++++.+.|.||+++... +.|+
T Consensus 99 ~~g~ialaHNGnl~N~~~Lr~~l~~~g~~f~t~sDsEvll~l~a~~~~~~~~~~a~~~~~~~v~G~ys~v~~~~--~~li 176 (470)
T COG0034 99 PGGGIALAHNGNLVNAEELRRELEEEGAIFNTTSDSEVLLHLLARELDEDDIFEAVKEVLRRVKGAYALVALIK--DGLI 176 (470)
T ss_pred CCCcEEEEecCcccCHHHHHHHHHhcCceecCCccHHHHHHHHHhhcccccHHHHHHHHHhhcCCcEEEEEEEC--CeEE
Confidence 46999999999999999999964 5666777777798886322111 134578899999999999985 5999
Q ss_pred EEe-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEe--CCcEEEE--ECCCC-CC-----CCCCCC
Q 026882 146 VAS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTA--VGGLRSF--ENPKN-KI-----TAVPAA 210 (231)
Q Consensus 146 ~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~--~~~~~~y--~~~~~-~~-----~~~~r~ 210 (231)
++| |||.+|...||.++||||.+||...+.+.++++.||++++++ +.++.+. ..++. .. .||+|+
T Consensus 177 a~RDP~GiRPL~iG~~~dG~yvvaSEt~Ald~iGa~~vRdv~pGE~v~i~~~~~g~~s~~~~~~~~~~~C~fEyVYFARP 256 (470)
T COG0034 177 AVRDPNGIRPLVLGKLGDGFYVVASETCALDILGAEFVRDVEPGEAVIITIDGDGLESKQVAEPPRRAPCSFEYVYFARP 256 (470)
T ss_pred EEECCCCCccceeeecCCCCEEEEechhhhhcccceEEEecCCceEEEEEecCceeEEEeccCCCCCccceEEEEEeecC
Confidence 999 999999975677999999999999988889999999998843 3345543 33321 22 299999
Q ss_pred cceeeCce
Q 026882 211 EEEIWGAT 218 (231)
Q Consensus 211 ds~~~g~~ 218 (231)
||.|+|.+
T Consensus 257 DS~Idg~s 264 (470)
T COG0034 257 DSVIDGIS 264 (470)
T ss_pred ccccCCee
Confidence 99999976
No 35
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase
Probab=99.92 E-value=2.4e-24 Score=210.90 Aligned_cols=171 Identities=15% Similarity=0.198 Sum_probs=136.2
Q ss_pred hhhHHHHHHHhHccCCCCcceEE--C----------------------------------------CcEEEEEee---CC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV--G----------------------------------------DNVTLAYTH---QN 61 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~--~----------------------------------------~~~~lgh~r---~~ 61 (231)
...+-.-+.+|+|||.|+.|+.. + ++++|||+| .+
T Consensus 20 ~~~l~~gL~~Lq~RG~dsaGia~~~~~~~~~~~~~~~k~~G~~~~l~~~~~~~~~~~~l~~~~~~~g~~~IGH~R~at~g 99 (680)
T PLN02981 20 LEVLFNGLRRLEYRGYDSAGIAIDNDPSLESSSPLVFREEGKIESLVRSVYEEVAETDLNLDLVFENHAGIAHTRWATHG 99 (680)
T ss_pred HHHHHHHHHHHhcCCcccceEEEEcCCcccccceEEEEcCCCHHHHHHHHhhhccccccccccCCCCcEEEEEcccccCC
Confidence 35677789999999999999976 1 247999999 22
Q ss_pred C--CCCCCCeeee-CCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhc-cC------CC--ChHHHH
Q 026882 62 E--SPLRQRSFAV-KDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRD-RA------PY--PPNHVV 125 (231)
Q Consensus 62 ~--~~~~QP~~~~-~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~-~g------~~--g~~~~l 125 (231)
. ..+.||+... .+.+++||||+|+|+.+||++|.. +++++|++++++++.+.++ .+ .+ .+.+++
T Consensus 100 ~~~~~n~qP~~~~~~~~ialvhNG~I~N~~eLr~~L~~~G~~f~s~tDtEvi~~li~~~~~~~~~~~~~~~~~~a~~~~~ 179 (680)
T PLN02981 100 PPAPRNSHPQSSGPGNEFLVVHNGIITNYEVLKETLLRHGFTFESDTDTEVIPKLAKFVFDKLNEEEGDVTFSQVVMEVM 179 (680)
T ss_pred CCCcCCCCCcccCCCCcEEEEECceEecHHHHHHHHHhCCCeeccCCHHHHHHHHHHHHHHhcccccCCCCHHHHHHHHH
Confidence 1 3678999763 378999999999999999999853 6778888888898554221 11 11 234689
Q ss_pred hccccceEEEEEECC-CCEEEEEe--ecEEEEEec--C---------------------CeEEEEeChhhHhhhccCceE
Q 026882 126 GHLSGYFAFIVYDKS-TSTLFVAS--VPLYWGITA--D---------------------GHVAFADDADLLKGACGKSLA 179 (231)
Q Consensus 126 ~~L~G~FAf~i~D~~-~~~l~~aR--kPLyyg~~~--~---------------------g~~~fASe~~aL~~~~~~~v~ 179 (231)
++|+|+|||++++.. .+++|++| +||++|..+ + +.+++|||.+||...+ +.++
T Consensus 180 ~~l~G~ya~~i~~~~~~~~i~~~r~~~PL~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aSe~~al~~~~-~~~~ 258 (680)
T PLN02981 180 RQLEGAYALIFKSPHYPNELVACKRGSPLLLGVKELPEEKNSSAVFTSEGFLTKNRDKPKEFFLASDASAVVEHT-KRVL 258 (680)
T ss_pred HhccCccceEEEecCCCCeEEEEecCCceEEEecCcccccccccccccccccccccccCCcEEEEeCHHHHHHhc-CEEE
Confidence 999999999999976 48999999 999999872 1 3699999999999986 5699
Q ss_pred EeCCCeEEEEeCCcEEEEE
Q 026882 180 SFPQGCFFSTAVGGLRSFE 198 (231)
Q Consensus 180 ~~ppG~~~~~~~~~~~~y~ 198 (231)
.++||+++++++++++.|.
T Consensus 259 ~l~~gei~~i~~~~~~~~~ 277 (680)
T PLN02981 259 VIEDNEVVHLKDGGVGIYK 277 (680)
T ss_pred EECCCeEEEEECCeEEEEe
Confidence 9999999998877777664
No 36
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.2e-23 Score=205.59 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=116.4
Q ss_pred cEEEEEee---CCC--CCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhc-cCC---
Q 026882 52 NVTLAYTH---QNE--SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRD-RAP--- 118 (231)
Q Consensus 52 ~~~lgh~r---~~~--~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~-~g~--- 118 (231)
+++|||+| .+. ..+.||+.+.++++++||||+||||.+||++|.. +++++|+++++++++..+. +|.
T Consensus 98 ~~~igH~R~at~g~~~~~n~qP~~~~~~~i~vvhNG~I~N~~eLr~~L~~~g~~f~s~tDtEvi~~li~~~~~~~g~~~~ 177 (670)
T PTZ00394 98 HVGIAHTRWATHGGVCERNCHPQQSNNGEFTIVHNGIVTNYMTLKELLKEEGYHFSSDTDTEVISVLSEYLYTRKGIHNF 177 (670)
T ss_pred CEEEEEeeceecCCCCcCCCCCcCCCCCCEEEEECeeEecHHHHHHHHHHcCCEecCCChHHHHHHHHHHHHHhcCCCCH
Confidence 47999999 222 4678999888889999999999999999999853 6777777788887654332 221
Q ss_pred -CChHHHHhccccceEEEEEECC-CCEEEEEe--ecEEEEEecC--------------------CeEEEEeChhhHhhhc
Q 026882 119 -YPPNHVVGHLSGYFAFIVYDKS-TSTLFVAS--VPLYWGITAD--------------------GHVAFADDADLLKGAC 174 (231)
Q Consensus 119 -~g~~~~l~~L~G~FAf~i~D~~-~~~l~~aR--kPLyyg~~~~--------------------g~~~fASe~~aL~~~~ 174 (231)
..+.+++++|+|+|||++.+.. .++|+++| +||++|..++ +.++|||++.||..++
T Consensus 178 ~~a~~~~~~~l~G~ya~~i~~~~~~~~l~~~Rd~~PL~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aSd~~a~~~~t 257 (670)
T PTZ00394 178 ADLALEVSRMVEGSYALLVKSVYFPGQLAASRKGSPLMVGIRRTDDRGCVMKLQTYDLTDLSGPLEVFFSSDVNSFAEYT 257 (670)
T ss_pred HHHHHHHHHHccCceEEEEEecCCCCEEEEEEcCCceEEEeccccccccccccccccccccCCCCcEEEEeChHHHHHhh
Confidence 1234799999999999998654 58999999 9999999732 4799999999999999
Q ss_pred cCceEEeCCCeEEEEeCCcEEEE
Q 026882 175 GKSLASFPQGCFFSTAVGGLRSF 197 (231)
Q Consensus 175 ~~~v~~~ppG~~~~~~~~~~~~y 197 (231)
.+ +..|++|++..+.++++.-|
T Consensus 258 ~~-~~~l~dg~~~~~~~~~~~~~ 279 (670)
T PTZ00394 258 RE-VVFLEDGDIAHYCDGALRFY 279 (670)
T ss_pred ce-EEEecCCeEEEEECCEEEEE
Confidence 65 99999999998876655444
No 37
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A.
Probab=99.92 E-value=1e-24 Score=171.13 Aligned_cols=112 Identities=27% Similarity=0.475 Sum_probs=70.5
Q ss_pred Eee---CCCCCCCCCee-eeCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCCChHHHHhcc
Q 026882 57 YTH---QNESPLRQRSF-AVKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPYPPNHVVGHL 128 (231)
Q Consensus 57 h~r---~~~~~~~QP~~-~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L 128 (231)
|+| .+...+.||++ +.++++++++||+|||+++|+++|.. ..+.+|+++++++|+++.+ |+ .+++++|
T Consensus 1 h~rl~~~~~~~~~QP~~~~~~~~~~l~~nG~i~N~~eL~~~l~~~g~~~~~~~D~e~i~~~~~~~~~---~~-~~~~~~l 76 (125)
T PF13537_consen 1 HVRLSTDDSDEGAQPFVSSEDGELVLVFNGEIYNREELRRELEERGHQFSSDSDSELILHLYEEYRE---WG-EDFLKRL 76 (125)
T ss_dssp ------------------------EEEEEEEES-HHHHHHTSSSS---S--SSHHHHHHHHHHH------HG-GGGGGT-
T ss_pred CcccccccccccccccccccccCEEEEEEEEEEChHHHHHHhhhcccccCCCCCHHHHHHHHHHHHH---HH-HHHHHhC
Confidence 666 23457899998 67788999999999999999999964 4677888888899985222 33 4899999
Q ss_pred ccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhh
Q 026882 129 SGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKG 172 (231)
Q Consensus 129 ~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~ 172 (231)
+|.|||++||..+++++++| |||||+..+++.++||||+++|++
T Consensus 77 ~G~fa~v~~d~~~~~l~~~rD~~G~rpLyy~~~~g~~~~faSe~~~L~a 125 (125)
T PF13537_consen 77 DGPFAFVIWDKDKKRLFLARDRFGIRPLYYGRTDGNGLAFASEIKALLA 125 (125)
T ss_dssp -EEEEEEEEETTE--EEEEE-TT--S--EEEEETT-EEEEESSHHHHHT
T ss_pred CceEEEEEEeCCCcEEEEEECCCCCCCeEEEEeCCCEEEEEEcHHHhcC
Confidence 99999999999888999999 999999984369999999999964
No 38
>PF13522 GATase_6: Glutamine amidotransferase domain
Probab=99.90 E-value=4.8e-23 Score=163.55 Aligned_cols=117 Identities=24% Similarity=0.385 Sum_probs=99.7
Q ss_pred CCCcce--EECCcEEEEEee--C--CC-CCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHH
Q 026882 42 SSAVSV--QVGDNVTLAYTH--Q--NE-SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAY 110 (231)
Q Consensus 42 pd~~~~--~~~~~~~lgh~r--~--~~-~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly 110 (231)
||..++ +..+.++|||+| + .. ..+.||+.+..++++++|||+|+|+.+|+++|.. ..+++|++++++++
T Consensus 1 pd~~~~~~~~~~~~~lgH~R~AT~G~~~~~~~hPf~~~~g~~~~~HNG~i~n~~~L~~~l~~~g~~~~~~tDSEii~~li 80 (133)
T PF13522_consen 1 PDFEGLASWLDGEAALGHTRYATVGSPTEENNHPFSNRDGRIALAHNGNIDNYKELREELGEKGHPFESDTDSEIIAALI 80 (133)
T ss_pred CChHHHHHhcCCCEEEEEeecCCCCCCCCcCCCCCcCCCCCEEEEECCeecCHHHHHHHHHHCCCcccCCCHHHHHHHHH
Confidence 667777 778889999999 1 11 3445999666789999999999999999999864 56678888888999
Q ss_pred HHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeC
Q 026882 111 KALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADD 166 (231)
Q Consensus 111 ~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe 166 (231)
++ +| +++++.|+|+|+|++||...++++++| +||||+.. ++.++||||
T Consensus 81 ~~------~g-~~~l~~l~G~~a~~~~~~~~~~l~~~rd~~g~~PL~~~~~-~~~~~~ASE 133 (133)
T PF13522_consen 81 HR------WG-EEALERLDGAFAFAVYDKTPNKLFLARDPLGIRPLYYGRD-GDGYVFASE 133 (133)
T ss_pred HH------HH-HHHHHHhcCceEEEEEEcCCCEEEEEEcCCCCCCEEEEEc-CCEEEEEeC
Confidence 76 55 589999999999999998889999998 99999998 789999998
No 39
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=99.89 E-value=2.6e-22 Score=180.22 Aligned_cols=188 Identities=12% Similarity=0.148 Sum_probs=143.8
Q ss_pred HHHHHHhHccCCCCcceEEC----------------------------CcEEEEEee-CC----CCCCCCCeeee--CCc
Q 026882 31 TALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTH-QN----ESPLRQRSFAV--KDE 75 (231)
Q Consensus 31 ~~m~~~l~~RGpd~~~~~~~----------------------------~~~~lgh~r-~~----~~~~~QP~~~~--~~~ 75 (231)
....-+|+|||.++.++... ++.+|||+| +. ...+.||++.. .|.
T Consensus 20 ~~~~~aLQHRGQesAGIvts~~~~~~~~~kG~Gmv~dVFte~~l~~L~g~~gIGH~RYsTaG~s~~~n~QPFvv~t~~G~ 99 (474)
T KOG0572|consen 20 ALGCVALQHRGQESAGIVTSGGRGRLYQIKGMGLVSDVFTEDKLSQLPGSIGIGHTRYSTAGSSALSNVQPFVVNTPHGS 99 (474)
T ss_pred HhhhHHHhhCCccccceEeecCCCceEEEeccchhhhhhcHHHHhhCccceeeeeeecccccccccccccceEeeccCce
Confidence 34447899999999888542 378999999 21 23678998763 477
Q ss_pred EEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHH----h--ccCCC--ChHHHHhccccceEEEEEECCCCE
Q 026882 76 IFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKAL----R--DRAPY--PPNHVVGHLSGYFAFIVYDKSTST 143 (231)
Q Consensus 76 ~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~----~--~~g~~--g~~~~l~~L~G~FAf~i~D~~~~~ 143 (231)
+++.|||++-|+++||+++.. ..|++|.++|++++..- + +.++| -+..+++.+.|.||++++.. ++
T Consensus 100 lavAHNGnLVN~~~Lrr~l~~~g~~l~T~SDSElil~~~a~~~~~~~~~~~~d~~~ri~~~~~~~~g~Yslv~m~~--d~ 177 (474)
T KOG0572|consen 100 LAVAHNGNLVNYKSLRRELLEEGVGLNTSSDSELILQLIAYAPEDVYRVDAPDWFARIRDVMELLPGAYSLVFMTA--DK 177 (474)
T ss_pred EEEeccCcccchHHHHHHHHhcCcccccCCcHHHHHHHHHhchHhhhcccCccHHHHHHHHHHhcCCceeEEEEEc--cE
Confidence 999999999999999999853 56666777777776531 1 12224 24578999999999999885 67
Q ss_pred EEEEe-----ecEEEEEecCC----eEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEECCCC-----------C
Q 026882 144 LFVAS-----VPLYWGITADG----HVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKN-----------K 203 (231)
Q Consensus 144 l~~aR-----kPLyyg~~~~g----~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~~~~-----------~ 203 (231)
||+.| |||++|..... .+++|||.++|.....+..+++.||+++.+...+.++-+.... +
T Consensus 178 l~avRDp~G~RPL~iG~r~~~~g~~~~v~aSESc~f~~i~a~y~Rev~PGEiV~i~r~g~~s~~~~~~~~~~~~~~cIFE 257 (474)
T KOG0572|consen 178 LYAVRDPYGNRPLCIGRRSNPDGTEAWVVASESCAFLSIGARYEREVRPGEIVEISRNGVKSVDIMKRPDENRMAFCIFE 257 (474)
T ss_pred EEEEecCCCCccceEeeecCCCCcceEEEEecceeeeecccEEEEeecCceEEEEecCCceeeeeecCCccccccceeee
Confidence 99999 99999986432 8999999999999888889999999998776666555443221 2
Q ss_pred CCCCCCCcceeeCceeE
Q 026882 204 ITAVPAAEEEIWGATFK 220 (231)
Q Consensus 204 ~~~~~r~ds~~~g~~~~ 220 (231)
..||+|+||.|.|+.-+
T Consensus 258 yvYFArpdSi~eG~sVY 274 (474)
T KOG0572|consen 258 YVYFARPDSIFEGQSVY 274 (474)
T ss_pred EEEeccCCceecccchH
Confidence 23999999999997643
No 40
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=2.9e-22 Score=190.65 Aligned_cols=165 Identities=16% Similarity=0.229 Sum_probs=138.9
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC---------------------------CcEEEEEee----C-CCCCCCCCeeeeCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTH----Q-NESPLRQRSFAVKD 74 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~lgh~r----~-~~~~~~QP~~~~~~ 74 (231)
...+-+-+++|-+||=|+.|+... +.++||||| . ....+.+|+.+ +
T Consensus 15 ~~il~~gL~rLEYRGYDSaGiav~~~~~l~~~k~~Gkv~~l~~~~~~~~~~~~~gIgHTRWATHG~P~~~NAHPh~~--~ 92 (597)
T COG0449 15 IDILLEGLKRLEYRGYDSAGIAVVGDGSLNVRKQVGKISNLEELLNKEPLIGGVGIAHTRWATHGGPTRANAHPHSD--G 92 (597)
T ss_pred HHHHHHHHHHHHccCCCcccEEEEeCCeEEEEEccCCHHHHHhhhcccccCCceeeeeccccCCCCCCcCCCCCCCC--C
Confidence 456777889999999999998541 378999999 1 23478899866 8
Q ss_pred cEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCC-CEEEEEe
Q 026882 75 EIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKST-STLFVAS 148 (231)
Q Consensus 75 ~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~-~~l~~aR 148 (231)
+++|||||.|.||.+||++|.. +.++||+++|.||++++.+++. ...+.++++|+|+||+++.|.+. +++++||
T Consensus 93 ~~avVHNGIIeN~~eLr~eL~~~G~~F~S~TDTEVi~hLi~~~~~~~~~~a~~~~l~~l~Gsyal~~~~~~~p~~i~~ar 172 (597)
T COG0449 93 EFAVVHNGIIENFAELKEELEAKGYVFKSDTDTEVIAHLLEEIYDTSLLEAVKKVLKRLEGSYALLCTHSDFPDELVAAR 172 (597)
T ss_pred CEEEEeCchhhCHHHHHHHHHhcCCEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHhcceeEEEEEecCCCCeEEEEc
Confidence 9999999999999999999973 7778888888899988665432 13457899999999999999985 8999999
Q ss_pred --ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEE
Q 026882 149 --VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR 195 (231)
Q Consensus 149 --kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~ 195 (231)
.||+.|.. ++..++||+..|++..+.+ +..+.+|++.+...++..
T Consensus 173 ~~sPL~iG~g-~~e~f~aSD~~a~l~~t~~-~~~l~dgd~~~~~~~~v~ 219 (597)
T COG0449 173 KGSPLVIGVG-EGENFLASDVSALLNFTRR-FVYLEEGDIAKLTTDGVS 219 (597)
T ss_pred CCCCeEEEec-CCcceEecChhhhhhhhce-EEEeCCCCEEEEECCcEE
Confidence 99999997 7889999999999999965 999999999888776666
No 41
>TIGR03442 conserved hypothetical protein TIGR03442. Members of this strictly bacterial protein family show similarity to class II glutamine amidotransferases (see Pfam family pfam00310). They are distinguished by appearing in a genome context with, and usually adjacent to or between, members of families TIGR03438 (an uncharacterized methyltransferase) and TIGR03440 (an uncharacterized protein).
Probab=99.64 E-value=4.5e-15 Score=129.73 Aligned_cols=135 Identities=15% Similarity=0.152 Sum_probs=100.7
Q ss_pred CcEEEEEee--C-C--C-CCCCCCeeeeCCcEEEEEeeEEcchH-----HHHHHhC-----cCCCCcHHHHHHHHHHHHh
Q 026882 51 DNVTLAYTH--Q-N--E-SPLRQRSFAVKDEIFCLFEGALDNLG-----SLRQQYG-----LAKSANEVILVIEAYKALR 114 (231)
Q Consensus 51 ~~~~lgh~r--~-~--~-~~~~QP~~~~~~~~~lv~nGeI~N~~-----eL~~~l~-----~~~~d~e~~li~~ly~~~~ 114 (231)
..++|||+| + . . ..+.||+.. ++++++|||.|.|++ +|+++|. ...+.||.+++.+++.+..
T Consensus 82 s~~~i~HvR~AT~G~~~~~~N~hPf~~--g~~~~aHNG~i~n~~~~~r~~L~~~l~~~~~~~~~g~TDSE~i~~li~~~~ 159 (251)
T TIGR03442 82 SGCVLAAVRSATVGMAIDESACAPFSD--GRWLFSHNGFVDNFRQTLYRPLRDRLPDIFYLAIEGSTDSAHLFALLLNRL 159 (251)
T ss_pred cceEEEEeeeCCCCCCcchhcCCCCCc--CCEEEEeCCccCCchhhhhHHHHhcCChhhccCCCCCCHHHHHHHHHHHHH
Confidence 357999999 2 1 2 268899874 789999999999998 5665553 2456667766667776543
Q ss_pred cc-CCC----ChHHHHhccccc-------eEEEEEECCCCEEEEEe--ecEEEEEecCCeEEEEeChhhHhhhccC-ceE
Q 026882 115 DR-APY----PPNHVVGHLSGY-------FAFIVYDKSTSTLFVAS--VPLYWGITADGHVAFADDADLLKGACGK-SLA 179 (231)
Q Consensus 115 ~~-g~~----g~~~~l~~L~G~-------FAf~i~D~~~~~l~~aR--kPLyyg~~~~g~~~fASe~~aL~~~~~~-~v~ 179 (231)
+. .+. .+.++++.|.|. |+|++.|. +++++.| .||||+.. ++.++||||. | ..+ .|+
T Consensus 160 ~~~~~~~~~~ai~~~~~~l~~~~~~~~~~~n~~~sdg--~~l~a~R~~~~L~~~~~-~~~~vvASEp--l---~~~~~W~ 231 (251)
T TIGR03442 160 LENDPRALEEALAEVLLILFSAAAAPRVRLNLLLTDG--SRLVATRWADTLYWLKD-PEGVIVASEP--Y---DDDPGWQ 231 (251)
T ss_pred hhcCCchHHHHHHHHHHHHHHHhhCcccceEEEEEcC--CEEEEEEeCCeEEEEEc-CCEEEEEeCC--c---CCCCCce
Confidence 22 111 234677888888 99999984 7999999 99999987 5689999998 3 233 799
Q ss_pred EeCCCeEEEEeCCcEE
Q 026882 180 SFPQGCFFSTAVGGLR 195 (231)
Q Consensus 180 ~~ppG~~~~~~~~~~~ 195 (231)
++|||+++++++++++
T Consensus 232 ~v~pge~v~i~~~~v~ 247 (251)
T TIGR03442 232 DVPDRHLLSVSEDDVT 247 (251)
T ss_pred EeCCCeEEEEECCcEE
Confidence 9999999998776654
No 42
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including lucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somwhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=99.64 E-value=2.8e-15 Score=131.12 Aligned_cols=133 Identities=15% Similarity=0.136 Sum_probs=101.7
Q ss_pred CcEEEEEee--CC---CCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc-----CCCCcHHHHHHHHHHHHhcc-CC-
Q 026882 51 DNVTLAYTH--QN---ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL-----AKSANEVILVIEAYKALRDR-AP- 118 (231)
Q Consensus 51 ~~~~lgh~r--~~---~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~-----~~~d~e~~li~~ly~~~~~~-g~- 118 (231)
+.++|||+| +. ...+.||+.. ++++++|||.|+|+++|++.+.. ..+++|.+++.+++.+.... +.
T Consensus 80 ~~~~l~H~R~At~G~~~~~n~hPf~~--~~~~~~HNG~i~n~~~l~~~l~~~~~~~~~~~tDSE~~~~li~~~l~~~~~~ 157 (257)
T cd01908 80 SPLVLAHVRAATVGPVSLENCHPFTR--GRWLFAHNGQLDGFRLLRRRLLRLLPRLPVGTTDSELAFALLLSRLLERDPL 157 (257)
T ss_pred ccEEEEEEecCCCCCCccccCCCccc--CCEEEEeCCccCCcchhhHHHHhcCccCCccCCHHHHHHHHHHHHHHhcCCc
Confidence 468999999 11 1377899866 48999999999999999988752 46677777777777654322 11
Q ss_pred ------CChHHHHhccc-----cceEEEEEECCCCEEEEEe----ecEEEEEec-----------------CCeEEEEeC
Q 026882 119 ------YPPNHVVGHLS-----GYFAFIVYDKSTSTLFVAS----VPLYWGITA-----------------DGHVAFADD 166 (231)
Q Consensus 119 ------~g~~~~l~~L~-----G~FAf~i~D~~~~~l~~aR----kPLyyg~~~-----------------~g~~~fASe 166 (231)
..+.++++.|+ |.|+|++.|. ++++++| +||||+... ++.++||||
T Consensus 158 ~~~~~~~al~~~~~~l~~~~~~~~~n~~~~dg--~~l~a~r~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~vvaSE 235 (257)
T cd01908 158 DPAELLDAILQTLRELAALAPPGRLNLLLSDG--EYLIATRYASAPSLYYLTRRAPFGCARLLFRSVTTPNDDGVVVASE 235 (257)
T ss_pred chHHHHHHHHHHHHHHHHhCcCeEEEEEEECC--CEEEEEEeCCCCceEEEeccccccccccccccccCCCCCEEEEEeC
Confidence 23457888998 6888888774 7899999 599999863 468999999
Q ss_pred hhhHhhhccCceEEeCCCeEEEEeC
Q 026882 167 ADLLKGACGKSLASFPQGCFFSTAV 191 (231)
Q Consensus 167 ~~aL~~~~~~~v~~~ppG~~~~~~~ 191 (231)
.-+... .|+++|||++++.++
T Consensus 236 ~l~~~~----~w~~v~~ge~~~i~~ 256 (257)
T cd01908 236 PLTDDE----GWTEVPPGELVVVSE 256 (257)
T ss_pred CCCCCC----CceEeCCCEEEEEeC
Confidence 876543 599999999998754
No 43
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine, an important step in ammonia assimilation in bacteria, cyanobacteria and plants. The N-terminal glutaminase domain catalyzes the hydrolysis of glutamine to glutamic acid and ammonia, and has a fold similar to that of other glutamine amidotransferases such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), and beta lactam synthetase (beta-LS), as well as the Ntn hydrolase folds of the proteasomal alpha and beta subunits.
Probab=99.56 E-value=1.2e-13 Score=127.79 Aligned_cols=131 Identities=13% Similarity=0.151 Sum_probs=96.9
Q ss_pred CcEEEEEee--CCCC---CCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc---------------------CCCCcHHH
Q 026882 51 DNVTLAYTH--QNES---PLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL---------------------AKSANEVI 104 (231)
Q Consensus 51 ~~~~lgh~r--~~~~---~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~---------------------~~~d~e~~ 104 (231)
+..+|+|+| ++.. ...||+. .++|||||+|+..+++.+.. ..+.||.+
T Consensus 201 s~~al~H~RfSTNT~p~W~~AqPfr------~laHNGEInT~~gnr~~m~are~~~~s~~~g~~~~~~~pi~~~~~SDS~ 274 (413)
T cd00713 201 SAFALVHSRFSTNTFPSWPLAQPFR------YLAHNGEINTIRGNRNWMRAREGLLKSPLFGEDLKKLKPIINPGGSDSA 274 (413)
T ss_pred EEEEEEEEecCCCCCCCcccCCcce------eEEEcccccCHHHHHHHHHHhhhhhcCccchhhHHhcCCcCCCCCChHH
Confidence 367999999 2221 5789974 48999999999999887631 22456666
Q ss_pred HHHHHHHHHhccCCCChH-----------------------------HHHhccccceEEEEEECCCCEEEEEe-----ec
Q 026882 105 LVIEAYKALRDRAPYPPN-----------------------------HVVGHLSGYFAFIVYDKSTSTLFVAS-----VP 150 (231)
Q Consensus 105 li~~ly~~~~~~g~~g~~-----------------------------~~l~~L~G~FAf~i~D~~~~~l~~aR-----kP 150 (231)
.+.++++-+...|. .+. .++..++|.||+++.|. +.++++| ||
T Consensus 275 ~ld~~le~l~~~g~-~l~~A~~mliPeaw~~~~~m~~~~r~fYey~~~~me~~dGp~aiv~~dg--~~i~a~rDrnGlRP 351 (413)
T cd00713 275 SLDNVLELLVRSGR-SLPEAMMMLIPEAWQNNPTMDPELRAFYEYHSSLMEPWDGPAAIAFTDG--RQVGASLDRNGLRP 351 (413)
T ss_pred HHHHHHHHHHHcCC-CHHHHHHHhCChhhccCccCCHHHHHHHHHHHHHhccCCCcEEEEEEeC--CEEEEEeCCCCCcc
Confidence 66677764432221 111 45678999999999884 6899999 99
Q ss_pred EEEEEecCCeEEEEeChhhHhhhccCceE---EeCCCeEEEEeC
Q 026882 151 LYWGITADGHVAFADDADLLKGACGKSLA---SFPQGCFFSTAV 191 (231)
Q Consensus 151 Lyyg~~~~g~~~fASe~~aL~~~~~~~v~---~~ppG~~~~~~~ 191 (231)
|+|+.++++.+++|||..+|.. ..+.|. ++.||+++.++.
T Consensus 352 l~~~~t~d~~~v~ASE~gal~~-~~~~V~~kg~l~PGe~v~id~ 394 (413)
T cd00713 352 ARYVITKDGLLIMSSEVGVVDV-PPEKVVEKGRLGPGEMLLVDL 394 (413)
T ss_pred eEEEEECCCEEEEEeCCcccCC-CcceeeecCCCCCCeEEEEEC
Confidence 9999886678999999999955 444565 899999988754
No 44
>KOG1268 consensus Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains [Cell wall/membrane/envelope biogenesis]
Probab=99.55 E-value=3.9e-14 Score=131.98 Aligned_cols=163 Identities=15% Similarity=0.213 Sum_probs=120.6
Q ss_pred HHHhHccCCCCcceEECC-----------------------------------cEEEEEee-----CCCCCCCCCeee-e
Q 026882 34 VDRFLQTNSSAVSVQVGD-----------------------------------NVTLAYTH-----QNESPLRQRSFA-V 72 (231)
Q Consensus 34 ~~~l~~RGpd~~~~~~~~-----------------------------------~~~lgh~r-----~~~~~~~QP~~~-~ 72 (231)
++.|.+||=|+.|+..++ +++|+||| .....+.+|+.+ +
T Consensus 27 LqRLEYRGYDSaGiaId~~~~~s~~~~k~~GkVkaL~e~i~~q~~~l~~~f~sH~gIAHTRWATHGvPs~~NsHP~rSd~ 106 (670)
T KOG1268|consen 27 LQRLEYRGYDSAGIAIDGDELESLLIYKQTGKVSSLKEEINNQNLNLDEKFISHCGIAHTRWATHGVPSEVNCHPHRSDP 106 (670)
T ss_pred HHHhhccCCCCCceeecCCcccchhhhcccCceeehhHHHhhcCcccceeeeeeeeeeeeehhhcCCCCccCCCCCcCCC
Confidence 567788988888887643 68999999 223466778754 4
Q ss_pred CCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCC--C----hHHHHhccccceEEEEEECC-C
Q 026882 73 KDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPY--P----PNHVVGHLSGYFAFIVYDKS-T 141 (231)
Q Consensus 73 ~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~--g----~~~~l~~L~G~FAf~i~D~~-~ 141 (231)
.+.+++||||.|.||++|+..|.. +.+|||++.++.|++..++.-+. . .+.++++|+|+||+++.... .
T Consensus 107 ~n~FvVVHNGIITNyk~lK~~L~~kG~~FESdTDTEciaKL~~~~~D~~~~~~~F~~lv~~v~k~lEGaFalvfkS~hfP 186 (670)
T KOG1268|consen 107 SNEFVVVHNGIITNFKELKALLEKKGYVFESDTDTECIAKLYKHIYDTSPEDLDFHVLVELVLKELEGAFGLLFKSSHFP 186 (670)
T ss_pred CCcEEEEEcCeeccHHHHHHHHHhcCceeecccchHHHHHHHHHHHhhCCCcccHHHHHHHHHHHhhhHHHHHHHhhcCC
Confidence 578999999999999999999864 56677777777888776665431 1 35789999999999987655 5
Q ss_pred CEEEEEe--ecEEEEEec-------------------------------------CC--eEEEEeChhhHhhhccCceEE
Q 026882 142 STLFVAS--VPLYWGITA-------------------------------------DG--HVAFADDADLLKGACGKSLAS 180 (231)
Q Consensus 142 ~~l~~aR--kPLyyg~~~-------------------------------------~g--~~~fASe~~aL~~~~~~~v~~ 180 (231)
+++.+.| .||..|... +. .++|||+..++..+..+ |--
T Consensus 187 ~e~Va~RrgSPlliGvKs~~kls~d~~~V~y~~~~~~~~~~~~~~d~~~~~~~~~~~~vEff~aSDasa~IEhT~r-V~f 265 (670)
T KOG1268|consen 187 GEVVAARKGSPLLIGVKSKTKLSVDFFPVEYGDTQEVSYLKLNKTDTKASLHFLAGSPVEFFTASDASALIEHTKR-VLF 265 (670)
T ss_pred cceeeeccCCcceeeecccccccccceeeeccccceecccccCCcccccccccccCCceEEEEecCcchhheecce-eEE
Confidence 8899999 777766530 11 68889999888888754 677
Q ss_pred eCCCeEEEEeCCc--EEEE
Q 026882 181 FPQGCFFSTAVGG--LRSF 197 (231)
Q Consensus 181 ~ppG~~~~~~~~~--~~~y 197 (231)
+..+.+....+|+ +++.
T Consensus 266 lEDddia~v~dG~lsihr~ 284 (670)
T KOG1268|consen 266 LEDDDIAHVSDGELTIHRG 284 (670)
T ss_pred eccCcEEEEecCceEEEee
Confidence 7777777666664 4454
No 45
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group. This catalytic activity is known as glutamine amidotransferase (GATase) (2.4.2 from EC) []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. On the basis of sequence similarities two classes of GATase domains have been identified [, ], class-I (also known as trpG-type) and class-II (also known as purF-type). Enzymes containing Class-II GATase domains include amido phosphoribosyltransferase (glutamine phosphoribosylpyrophosphate amidotransferase) (2.4.2.14 from EC), which catalyses the first step in purine biosynthesis (gene purF in bacteria, ADE4 in yeast); glucosamine--fructose-6-phosphate aminotransferase (2.6.1.16 from EC), which catalyses the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine (gene glmS in Escherichia coli, nodM in Rhizobium, GFA1 in yeast); and asparagine synthetase (glutamine-hydrolizing) (6.3.5.4 from EC), which is responsible for the synthesis of asparagine from aspartate and glutamine. A cysteine is present at the N-terminal extremity of the mature form of all these enzymes. This domain is found in a number of cysteine peptidases belonging to MEROPS peptidase family C44 and their non-peptidase homologs. ; GO: 0008152 metabolic process; PDB: 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A 1GPH_1 1AO0_D 3OOJ_E 1JXA_C 2J6H_B ....
Probab=99.24 E-value=1e-10 Score=107.22 Aligned_cols=110 Identities=19% Similarity=0.188 Sum_probs=77.5
Q ss_pred CCcEEEEEee--CCC---CCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCC----------------CcHHH
Q 026882 50 GDNVTLAYTH--QNE---SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKS----------------ANEVI 104 (231)
Q Consensus 50 ~~~~~lgh~r--~~~---~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~----------------d~e~~ 104 (231)
.+.++|+|+| ++. -...||+. +++|||||.|+..+++.+.. ..+ .||.+
T Consensus 194 ~s~~~i~H~RysTnt~p~w~~AqPf~------~laHNGeInt~~~n~~~l~~r~~~~~~~~~~~~~~~~pi~~~~~SDS~ 267 (361)
T PF00310_consen 194 KSHFAIGHQRYSTNTFPSWENAQPFR------ALAHNGEINTIRGNRNWLEARGYKLNSPLFGDLKELLPIVNPGGSDSE 267 (361)
T ss_dssp EBSEEEEEEEE-SSSSCSGGGSSSEE------EEEEEEEETTHHHHHHHHHHHCCCBSSTTCGHHHCC-SSS-TTS-HHH
T ss_pred cceEEEEEEecCCCCCCcchhcChHH------HhhhccccccHHHHHHHHHhhcccccCccccchhhcccccCCCCChHH
Confidence 3578999999 322 16789985 79999999999999988642 222 56666
Q ss_pred HHHHHHHHHhccCC-------------C---------------ChHHHHhccccceEEEEEECCCCEEEEEe-----ecE
Q 026882 105 LVIEAYKALRDRAP-------------Y---------------PPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPL 151 (231)
Q Consensus 105 li~~ly~~~~~~g~-------------~---------------g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPL 151 (231)
.+..+++.+...+. | ....+++.++|.||+++.|. +.++++| ||+
T Consensus 268 ~l~~~le~l~~~g~~l~~a~~~l~p~~~~~~~~~~~~~~~~y~~~~~~~~~~dGPaai~~~~g--~~~~a~~Dr~GLRP~ 345 (361)
T PF00310_consen 268 VLDNLLELLLRRGRSLEEAMMMLIPPAWENDEDMSPEKRAFYEYHASLMEPWDGPAAIIFTDG--NGVGAFLDRNGLRPL 345 (361)
T ss_dssp HHHHHHHHHHHTTSSHHHHHHHHSGG--TTSCCSTHHHHHHHHHHHHHHCC--CCEEEEEECS--SEEEEEE-TT--S--
T ss_pred HHHHHHHHHHhcCCCHHHHHHhhCCcccccCccCCHHHHHHHHHHHHhhccCCCceEEEEEeC--CEEEEEECCCCCcce
Confidence 66666665444440 1 01256788999999999875 5688888 999
Q ss_pred EEEEecCCeEEEEeCh
Q 026882 152 YWGITADGHVAFADDA 167 (231)
Q Consensus 152 yyg~~~~g~~~fASe~ 167 (231)
.|+.++|+.+++|||.
T Consensus 346 ~~~~~~d~~~v~aSE~ 361 (361)
T PF00310_consen 346 RYGITEDGLVVLASEA 361 (361)
T ss_dssp EEEEETTCEEEEESST
T ss_pred EEEEECCCEEEEEeCC
Confidence 9999977899999994
No 46
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism]
Probab=99.02 E-value=2.6e-09 Score=98.62 Aligned_cols=141 Identities=17% Similarity=0.191 Sum_probs=98.4
Q ss_pred HHHHHHHhHccCCCCcceEE-CCcEEEE----Eee-CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCcCCCCcHH
Q 026882 30 STALVDRFLQTNSSAVSVQV-GDNVTLA----YTH-QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGLAKSANEV 103 (231)
Q Consensus 30 ~~~m~~~l~~RGpd~~~~~~-~~~~~lg----h~r-~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~~~~d~e~ 103 (231)
...|...+..||||.++-.. +..-++. +.. .......||++. +++.++.+||+|||-.. ++++.|+
T Consensus 20 ~~~l~~~~~~rg~d~~~~v~~~~~~y~~~f~~~vL~lrG~~t~Qpvv~-d~~~vfl~NGeIyn~~~-------s~~~~d~ 91 (520)
T KOG0573|consen 20 SEALGLLIGNRGPDHSSKVCTDGKPYIVLFESSVLSLRGYLTKQPVVE-DDRYVFLFNGEIYNGEK-------SDTLFDT 91 (520)
T ss_pred hhHHHHHhhccCCCchhhhhhcccceeEEeecceEEEeeeeccCceec-ccceEEEecceeccCCC-------ccccchH
Confidence 45788899999998776543 3322222 221 111245799765 46688999999999643 4566677
Q ss_pred HHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhccCce
Q 026882 104 ILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSL 178 (231)
Q Consensus 104 ~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v 178 (231)
.+++.......+. ..+.+.++.++|.|||++||.+.++||..| +.|.|+.+..+..+++|... ...+.+
T Consensus 92 ~~l~~~l~~~~e~--~~Il~~i~~~qGp~~~iyY~~~~~~LyfgRD~~GRrSLly~~~~~~f~~~~st~g----~~~~~i 165 (520)
T KOG0573|consen 92 DILAEELSNLKES--GDILDIIKSLQGPWAFIYYDVRSDKLYFGRDDIGRRSLLYSLDPFNFSLVLSTVG----TSGKLI 165 (520)
T ss_pred HHHHHHHhcCCcc--ccHHHHHHhccCCceEEEEEccCcEEEEecccccceeeeEEeccCceeEEeeccc----cCCccc
Confidence 7766666643322 235688899999999999999999999999 99999998656555545432 223457
Q ss_pred EEeCCC
Q 026882 179 ASFPQG 184 (231)
Q Consensus 179 ~~~ppG 184 (231)
+++||+
T Consensus 166 ~e~~~~ 171 (520)
T KOG0573|consen 166 YEVPPV 171 (520)
T ss_pred cccCch
Confidence 789999
No 47
>PRK11750 gltB glutamate synthase subunit alpha; Provisional
Probab=98.85 E-value=4.5e-08 Score=101.68 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=55.8
Q ss_pred HHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhccCceE--EeCCCeEEEEeC
Q 026882 124 VVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAV 191 (231)
Q Consensus 124 ~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~--~~ppG~~~~~~~ 191 (231)
.++-++|.||+++.|. +.+++.| |||.|+.++|+.+++|||..+|.....+.++ ++.||+++.++.
T Consensus 332 lmEpwdGpaaiv~~~g--~~i~A~~DrnGlRPlr~~~~~d~~~i~aSE~g~ldi~~~~vvrkg~l~PGemi~id~ 404 (1485)
T PRK11750 332 HMEPWDGPAGIVMTDG--RYAACNLDRNGLRPARYVITKDKLITLASEVGIWDYQPDEVVEKGRVGPGELLVIDT 404 (1485)
T ss_pred hcccCCCCEEEEEEeC--CEEEEecCCCCCccceEEEEcCCEEEEEecceeeecccceeEEecccCCCeEEEEeC
Confidence 4566799999999984 7899998 9999998877889999999998766666667 899999987753
No 48
>PF13230 GATase_4: Glutamine amidotransferases class-II; PDB: 3MDN_D.
Probab=98.67 E-value=3.7e-07 Score=80.77 Aligned_cols=136 Identities=15% Similarity=0.220 Sum_probs=66.8
Q ss_pred cEEEEEee--C--C-CCCCCCCeeee--CCcEEEEEeeEEcchHHHHHH-hCcCCCCcHHHHHHHHHHHH-hccCC---C
Q 026882 52 NVTLAYTH--Q--N-ESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQ-YGLAKSANEVILVIEAYKAL-RDRAP---Y 119 (231)
Q Consensus 52 ~~~lgh~r--~--~-~~~~~QP~~~~--~~~~~lv~nGeI~N~~eL~~~-l~~~~~d~e~~li~~ly~~~-~~~g~---~ 119 (231)
.+.|+|.| + . ...+.||+... .++.+.+|||.|.+++.++.. +. ..++||.|.+..++... .+.++ .
T Consensus 72 ~~~laHvR~AT~G~v~~~N~HPF~~~~~g~~w~FaHNG~i~~f~~~~~~~~~-~~G~TDSE~~F~lll~~l~~~~~~~~~ 150 (271)
T PF13230_consen 72 RLFLAHVRAATQGAVSLENCHPFSRELWGRRWLFAHNGTIPGFEDILDDRYQ-PVGTTDSEHAFCLLLDQLRDRGPDAPP 150 (271)
T ss_dssp EEEEEEE------------SS-EE----ETTEEEEEEEEETTGGGGHHHHHT---S--HHHHHHHHHHHTTTTT-HH--H
T ss_pred CEEEEEecccCCCCCCcccCCCceeccCCCcEEEEeCCccccccccCccccc-cCCCcHHHHHHHHHHHHHHHhCCcccc
Confidence 46899999 1 1 23678998642 257899999999998876632 32 34444555444444332 12110 0
Q ss_pred C-------hHHHHhccc--cceEEEEEECCCCEEEEEe-ecEEEEE------------------------ecCCeEEEEe
Q 026882 120 P-------PNHVVGHLS--GYFAFIVYDKSTSTLFVAS-VPLYWGI------------------------TADGHVAFAD 165 (231)
Q Consensus 120 g-------~~~~l~~L~--G~FAf~i~D~~~~~l~~aR-kPLyyg~------------------------~~~g~~~fAS 165 (231)
. +.+.++++. |.+.|++.|. +.|++.| +.|||.. ..+..++|||
T Consensus 151 ~~~~~~~~l~~~~~~~~~~~~~N~~lsDG--~~l~a~~~~~l~~~~r~~p~~~~~l~~~~~~~~~~~~~~~~~~~~vVaS 228 (271)
T PF13230_consen 151 ALEELFEALRELAKEINEYGSLNFLLSDG--ERLFAHRYTSLYYLTRRPPFGKARLFDEDYEVDFSEVTDPDDRAVVVAS 228 (271)
T ss_dssp HHHHHHHHHHHHHHS-SSSEEEEEEEE-S--S-EEEEEEESSS----------------------EEEEETTTTEEEEES
T ss_pred cHHHHHHHHHHHHHHhccCeeEEEEEECC--ceEEEEEcCCeeEEeccccccccccccchhhhhhhhccCCCCCEEEEEe
Confidence 0 123445554 6788888885 6889988 6666541 1245788999
Q ss_pred ChhhHhhhccCceEEeCCCeEEEEeCCcE
Q 026882 166 DADLLKGACGKSLASFPQGCFFSTAVGGL 194 (231)
Q Consensus 166 e~~aL~~~~~~~v~~~ppG~~~~~~~~~~ 194 (231)
|.=. . .+.|.++|+|++++++.|.+
T Consensus 229 ePLt--~--~e~W~~vp~g~~l~~~~G~v 253 (271)
T PF13230_consen 229 EPLT--D--DEDWEPVPPGSLLVFRDGEV 253 (271)
T ss_dssp S--------SS--EE--SSEEEE------
T ss_pred ccCC--C--CCCeEEcCCCcEEEEecccc
Confidence 8622 1 23599999999999977653
No 49
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism]
Probab=98.07 E-value=1.7e-05 Score=72.81 Aligned_cols=132 Identities=14% Similarity=0.106 Sum_probs=84.1
Q ss_pred CcEEEEEee--CCC---CCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC---
Q 026882 51 DNVTLAYTH--QNE---SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP--- 118 (231)
Q Consensus 51 ~~~~lgh~r--~~~---~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~--- 118 (231)
+.++|+|+| ++. -..+||+. .++|||||.++..-++.+.. ..+.++.+.+..++-.....+.
T Consensus 202 s~~~l~HsRFSTNT~p~W~~AHPfr------~lvHNGEInT~~gN~nwm~ar~~~~~s~~~~e~~a~l~p~~~~~~sDs~ 275 (371)
T COG0067 202 SAIALVHTRFSTNTFPSWPLAHPFR------LLVHNGEINTYGGNRNWLEARGYKFESPTDGEVLAKLLPILMRGGSDSA 275 (371)
T ss_pred eeEEEEEeccCCCCCCCCCccCcce------eeeecceecccccHHHHHHHhhcccccCccHHHHHHHHHHhcccCCcch
Confidence 478999999 222 15678863 36999999998887776642 3333333333344432111210
Q ss_pred -----------CCh-HHHHhccccceEEEEEECC-CCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhccCceEE
Q 026882 119 -----------YPP-NHVVGHLSGYFAFIVYDKS-TSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACGKSLAS 180 (231)
Q Consensus 119 -----------~g~-~~~l~~L~G~FAf~i~D~~-~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~ 180 (231)
.|. ..-...|.|.||+++-..- +....+.+ +|.+-|-+ +..+.++|+..|++..++
T Consensus 276 ~~dn~lE~l~~~G~~l~~a~~m~~P~aw~~~~~~~~~~~afye~~~~l~epwdGpa-~~~f~dgse~gA~ldrng----- 349 (371)
T COG0067 276 SLDNALELLLLGGRDLYHAAMLLGPEAWVVGTDMDPEGRAFYEDHSALMEPWDGPA-DIVFTDGSEEGAILDRNG----- 349 (371)
T ss_pred hhhHHHHHHHhcCcCchhHHHhcCchhhccCCCCCcceEEEEehhhhCCCCccCCc-ceeEEeeeeeeeeeccCC-----
Confidence 011 1345788999998875422 23334444 99999987 788999999999877653
Q ss_pred eCCCeEEEEeCCcE
Q 026882 181 FPQGCFFSTAVGGL 194 (231)
Q Consensus 181 ~ppG~~~~~~~~~~ 194 (231)
+.|+.|++.+++.+
T Consensus 350 Lrp~Ry~~t~d~~v 363 (371)
T COG0067 350 LRPARYWITKDGEV 363 (371)
T ss_pred CCcceEEEecCCEE
Confidence 77888887766543
No 50
>COG0121 Predicted glutamine amidotransferase [General function prediction only]
Probab=97.33 E-value=0.0019 Score=56.74 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=70.2
Q ss_pred cEEEEEee--CC---CCCCCCCeeeeC--CcEEEEEeeEEcchHHH-HHHhCc-CCCCcHHHHHHH-----HHHHHhccC
Q 026882 52 NVTLAYTH--QN---ESPLRQRSFAVK--DEIFCLFEGALDNLGSL-RQQYGL-AKSANEVILVIE-----AYKALRDRA 117 (231)
Q Consensus 52 ~~~lgh~r--~~---~~~~~QP~~~~~--~~~~lv~nGeI~N~~eL-~~~l~~-~~~d~e~~li~~-----ly~~~~~~g 117 (231)
.+.|+|.| +. ...+.||+.... ..+.++|||.|.|++.+ ...+.. ..+|++...... .+-.....|
T Consensus 71 ~~viaHvR~At~G~vs~~ntHPF~~~~~~~~~~FaHNG~l~~~~~~~~~~~~~~~~tds~~~~~~~~~~~~~~~~~~~~~ 150 (252)
T COG0121 71 ELVIAHVRKATQGEVSLSNTHPFTRELWGYIWLFAHNGQLDKFKLLEGRKLEPVGYTDSEAAFCGITDSERIFLLILKPG 150 (252)
T ss_pred cEEEEEEeccCCCcccccCCCCccccCCccceEEEecCcccCcccccccccCCCCcchHHHHHHHhhhhhhhhhhhcCCC
Confidence 57899999 21 136788986532 35689999999999984 333432 223333332110 000000111
Q ss_pred C----------CChHHHHhccccceEEEE------EECCCCEEEEEe-------ecEEEEEecC-CeEEEEeChhhHhhh
Q 026882 118 P----------YPPNHVVGHLSGYFAFIV------YDKSTSTLFVAS-------VPLYWGITAD-GHVAFADDADLLKGA 173 (231)
Q Consensus 118 ~----------~g~~~~l~~L~G~FAf~i------~D~~~~~l~~aR-------kPLyyg~~~~-g~~~fASe~~aL~~~ 173 (231)
. .++..+ ..-+|.+-++. +..+...++++| .-||+..+.+ ..+++|||. |..
T Consensus 151 ~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~viaS~p--lt~- 226 (252)
T COG0121 151 LDALFQAEIRALGLFNT-LLSDGNYLFALCSTALHLLSRGAPFGAARYLDDDEEPDLYRYTDPGDVVVVIASEP--LTD- 226 (252)
T ss_pred chhhhhHHHHhhhhhhh-hhhccccceeeeeccceEEecCCceEEEEecCCccccchhhccCCCceEEEEEecc--ccC-
Confidence 0 011011 12233322222 333345566666 2233332211 248888885 222
Q ss_pred ccCceEEeCCCeEEEEeCCc
Q 026882 174 CGKSLASFPQGCFFSTAVGG 193 (231)
Q Consensus 174 ~~~~v~~~ppG~~~~~~~~~ 193 (231)
+ ..+.++++|++++++.++
T Consensus 227 ~-~~w~~v~~g~~~~v~~~~ 245 (252)
T COG0121 227 N-EPWTEVPPGELVTVKGGE 245 (252)
T ss_pred C-CCceEcCCCcEEEEecCc
Confidence 2 239999999999887665
No 51
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices. Their exact function has not, as yet, been determined []. ; PDB: 1Q19_A 1Q15_D.
Probab=97.26 E-value=0.0048 Score=51.16 Aligned_cols=105 Identities=18% Similarity=0.224 Sum_probs=67.0
Q ss_pred cEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe--
Q 026882 75 EIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-- 148 (231)
Q Consensus 75 ~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-- 148 (231)
+-..-.=|.|||..-|+.-.+. ...-+|+++++.++.+ .|. .++.--+|+|.|.|=|+ ++++.+..
T Consensus 48 ~~tayLIGsiyNr~~L~~lag~~eg~a~v~nd~ElL~~~~~~------lG~-~aLsLAEGdfcffiE~k-ng~L~l~Tds 119 (201)
T PF09147_consen 48 RGTAYLIGSIYNRRFLRGLAGMWEGHAYVLNDAELLYTIFTR------LGN-SALSLAEGDFCFFIEDK-NGELTLITDS 119 (201)
T ss_dssp TEEEEEES--S-HHHHHHHHTTT-GGGGG--HHHHHHHHHHH------H-G-GGGGG--SSEEEEEEET-TSEEEEEE-S
T ss_pred CccEEEEEEeccHHHHHHhhheeeccceeeccHHHHHHHHHH------hhh-hhhhhhcCceEEEEecC-CCcEEEEecC
Confidence 3344456999999999877664 3446788887777776 453 78899999999999775 68998888
Q ss_pred ---ecEEEEEecCCeEEEEeChhhHhhh-------------------------ccCceEEeCCCeEEEE
Q 026882 149 ---VPLYWGITADGHVAFADDADLLKGA-------------------------CGKSLASFPQGCFFST 189 (231)
Q Consensus 149 ---kPLyyg~~~~g~~~fASe~~aL~~~-------------------------~~~~v~~~ppG~~~~~ 189 (231)
.|.|.-.+ +..|+...+|-.-.. +.+.+..+.||.+-+.
T Consensus 120 ~G~~pv~lV~~--~~~WiTn~LK~V~~~eg~~a~df~~E~~v~q~~l~~d~~sPi~na~RlkPGsin~l 186 (201)
T PF09147_consen 120 RGFNPVYLVQS--KFIWITNSLKLVSAVEGEGAFDFMPESLVIQSSLRPDNFSPIKNAQRLKPGSINVL 186 (201)
T ss_dssp SSSS-EEEEES--SSEEEES-HHHHHHHH-TTSS-B--HHHHSS-S---TT--SBTTEEEE-SSEEEEE
T ss_pred CCCceEEEEec--CceEEecceEEEEEeeccccccccchhHHHhhhccCCCcCccccceecCCCceEEE
Confidence 77777654 467888777655321 1146888999998654
No 52
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism]
Probab=90.01 E-value=1 Score=47.52 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=27.6
Q ss_pred ecEEEEEecCCeEEEEeChhhHhhhccC--ceEEeCCCeEEEEe
Q 026882 149 VPLYWGITADGHVAFADDADLLKGACGK--SLASFPQGCFFSTA 190 (231)
Q Consensus 149 kPLyyg~~~~g~~~fASe~~aL~~~~~~--~v~~~ppG~~~~~~ 190 (231)
||-=|..+.|+.+++|||.-.+---..+ .=..+.||.++..+
T Consensus 434 RP~Ryy~Tsdd~v~~ASEVGvv~i~~~kVv~KgRL~PG~MllVD 477 (2142)
T KOG0399|consen 434 RPARYYITSDDRVICASEVGVVPIPPEKVVQKGRLKPGMMLLVD 477 (2142)
T ss_pred cceeeEEecCCEEEEeecccccCCCHHHhhhccCcCCCeEEEEE
Confidence 7776666668999999998654211111 01458899988664
No 53
>TIGR03823 FliZ flagellar regulatory protein FliZ. FliZ is involved in the regulation of flagellar assembly and possibly also the down-regulation of the motile phenotype. FliZ interacts with the flagellar translational activator FlhCD complex.
Probab=39.79 E-value=20 Score=29.28 Aligned_cols=19 Identities=32% Similarity=0.468 Sum_probs=16.7
Q ss_pred CcEEEEEeeEEcchHHHHH
Q 026882 74 DEIFCLFEGALDNLGSLRQ 92 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~ 92 (231)
+++++|+||+|-|.+.+.+
T Consensus 33 DRisLV~~gqiinK~~Ia~ 51 (168)
T TIGR03823 33 DRISLVFRGQIINKESISR 51 (168)
T ss_pred hheeeeecceeecHHHHHH
Confidence 6799999999999988754
No 54
>PRK11582 flagella biosynthesis protein FliZ; Provisional
Probab=39.12 E-value=21 Score=29.18 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=16.6
Q ss_pred CcEEEEEeeEEcchHHHHH
Q 026882 74 DEIFCLFEGALDNLGSLRQ 92 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~ 92 (231)
+++++|+||+|-|.+.+.+
T Consensus 33 DRisLV~~gqiinK~~Ia~ 51 (169)
T PRK11582 33 DRITLVFRGQIINKIAISR 51 (169)
T ss_pred hheeeeecceeecHHHHHH
Confidence 6799999999999988754
No 55
>KOG0876 consensus Manganese superoxide dismutase [Inorganic ion transport and metabolism]
Probab=32.91 E-value=1.5e+02 Score=25.94 Aligned_cols=74 Identities=20% Similarity=0.334 Sum_probs=46.5
Q ss_pred EEEe--eEEcchHHHHHHhCcCCC-CcHHHHHHHHHHHHhccCCCChHHHH-------hcccc-ceEEEEEECCCCEEEE
Q 026882 78 CLFE--GALDNLGSLRQQYGLAKS-ANEVILVIEAYKALRDRAPYPPNHVV-------GHLSG-YFAFIVYDKSTSTLFV 146 (231)
Q Consensus 78 lv~n--GeI~N~~eL~~~l~~~~~-d~e~~li~~ly~~~~~~g~~g~~~~l-------~~L~G-~FAf~i~D~~~~~l~~ 146 (231)
..|| |.|||+.--.+.+....+ ..+...+..++++ +.|. .+++. ..+.| -|.+.++++..++|++
T Consensus 93 ~~Fn~~~~~~Nh~fFw~~l~p~gg~~p~~~~L~~aI~~--~FGS--~ee~~k~~~~~~~~v~GsGW~WLv~~~~~~kL~i 168 (234)
T KOG0876|consen 93 PKFNGAGHIYNHSFFWENLAPPGGGKPEGEALLKAIDS--SFGS--LEEFVKELNAAAAAVFGSGWLWLVYNKELKKLFI 168 (234)
T ss_pred hhcCCccccccchhhhhhccCCCCCCCchHHHHHHHHH--hhcC--HHHHHHHHHHHHHhhcCCceEEEEEcCCCCeEEE
Confidence 3444 589999988887764111 2232234466765 3332 12222 33455 6999999987789999
Q ss_pred Ee-----ecEEEEE
Q 026882 147 AS-----VPLYWGI 155 (231)
Q Consensus 147 aR-----kPLyyg~ 155 (231)
.+ -||+++.
T Consensus 169 ~~T~Na~~P~~~~t 182 (234)
T KOG0876|consen 169 LTTYNAGDPLVWTT 182 (234)
T ss_pred EecCCCCCCeeccC
Confidence 88 7998873
No 56
>COG4875 Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown]
Probab=22.01 E-value=1.8e+02 Score=23.11 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=28.3
Q ss_pred ccceEEEEEECCCCEEEEEeecEEEEEecCCeEEEEeChh
Q 026882 129 SGYFAFIVYDKSTSTLFVASVPLYWGITADGHVAFADDAD 168 (231)
Q Consensus 129 ~G~FAf~i~D~~~~~l~~aRkPLyyg~~~~g~~~fASe~~ 168 (231)
.|.|.|.+-| +.-..||-..-|++. +|.+++++.-.
T Consensus 114 ~GtYTF~f~D---Gs~v~ARYtftY~w~-~g~WlI~~HHS 149 (156)
T COG4875 114 AGTYTFIFTD---GSNVQARYTFTYSWI-DGTWLIVNHHS 149 (156)
T ss_pred cceEEEEEcC---CcceeEEEEEEEEec-CCeEEEEeccc
Confidence 5899999987 456778866788888 78999887643
No 57
>COG4315 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.16 E-value=91 Score=24.52 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=22.1
Q ss_pred HhccccceEEEEEECCCCEE-EEEe-ecEEEEEe
Q 026882 125 VGHLSGYFAFIVYDKSTSTL-FVAS-VPLYWGIT 156 (231)
Q Consensus 125 l~~L~G~FAf~i~D~~~~~l-~~aR-kPLyyg~~ 156 (231)
-..-+|.|+++.-+ +++. ++-+ +|||+...
T Consensus 86 ~dka~Gdysii~Rk--DGt~QWa~dGkPLY~w~k 117 (138)
T COG4315 86 ADKASGDYSIIARK--DGTKQWAYDGKPLYLWVK 117 (138)
T ss_pred ccccCCCeeeEEec--CchhhhhcCCceeEEEee
Confidence 46789999988855 3433 6666 99998775
No 58
>PF10611 DUF2469: Protein of unknown function (DUF2469); InterPro: IPR019592 This entry represents a group of proteins often found in Actinomycetes species, clustered with signal peptidase and/or RNAse-HII.
Probab=20.57 E-value=3.1e+02 Score=20.52 Aligned_cols=51 Identities=24% Similarity=0.418 Sum_probs=30.9
Q ss_pred CcHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-ecEEEEEecCCeEEEEeCh
Q 026882 100 ANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-VPLYWGITADGHVAFADDA 167 (231)
Q Consensus 100 d~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-kPLyyg~~~~g~~~fASe~ 167 (231)
++|.++ .||++. +..-|.|++++=. ++++|+|- --|--.. .+|.++|-=.+
T Consensus 10 Ete~EL--~LYrEY------------rDVv~lF~yvVET--eRRFYLaN~Vd~~~r~-~~g~vyfEv~m 61 (101)
T PF10611_consen 10 ETEMEL--ALYREY------------RDVVGLFSYVVET--ERRFYLANQVDVQVRS-AGGDVYFEVSM 61 (101)
T ss_pred hhHHHH--HHHHHH------------HHHHhheeeEEEe--eeeeEeecceEEEEec-CCCcEEEEEEe
Confidence 356666 789862 2335679999854 47899888 2222222 35677775443
No 59
>COG4256 HemP Hemin uptake protein [Inorganic ion transport and metabolism]
Probab=20.44 E-value=56 Score=22.39 Aligned_cols=21 Identities=29% Similarity=0.213 Sum_probs=16.6
Q ss_pred CCeeeeCCcEEEEEeeEEcch
Q 026882 67 QRSFAVKDEIFCLFEGALDNL 87 (231)
Q Consensus 67 QP~~~~~~~~~lv~nGeI~N~ 87 (231)
|-++.+++.+.+-|||.+|-.
T Consensus 31 ~~Lfgg~~~i~I~H~Ga~Y~l 51 (63)
T COG4256 31 QTLFGGDGKIIIDHDGAEYLL 51 (63)
T ss_pred hhcccCCCeEEEecCCceEEE
Confidence 445667788999999999954
Done!