Query 026882
Match_columns 231
No_of_seqs 156 out of 1590
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 00:32:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026882hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 1.3E-34 4.3E-39 276.1 17.6 168 27-202 17-195 (553)
2 1xff_A D-fructose-6-, glucosam 100.0 1.4E-32 4.8E-37 236.6 20.3 168 28-199 14-224 (240)
3 1ao0_A Glutamine phosphoribosy 100.0 1.4E-31 4.7E-36 250.0 20.3 188 27-217 13-253 (459)
4 2bpl_A Glucosamine--fructose-6 100.0 2.3E-29 7.9E-34 242.1 19.7 169 27-199 13-224 (608)
5 1ecf_A Glutamine phosphoribosy 100.0 2.1E-28 7E-33 231.0 23.2 190 27-217 13-269 (504)
6 1jgt_A Beta-lactam synthetase; 99.9 2.4E-25 8.2E-30 210.5 15.0 144 38-202 40-212 (513)
7 1q15_A CARA; CMPR, (2S,5S)-5-c 99.9 5.5E-25 1.9E-29 207.5 7.9 142 51-203 26-208 (503)
8 3mdn_A Glutamine aminotransfer 99.9 2.7E-21 9.3E-26 169.5 13.8 140 52-198 82-256 (274)
9 1te5_A Conserved hypothetical 99.7 3E-18 1E-22 148.8 8.0 137 52-195 72-252 (257)
10 1ea0_A Glutamate synthase [NAD 99.5 2.8E-13 9.6E-18 139.2 13.8 132 51-191 202-395 (1479)
11 1ofd_A Ferredoxin-dependent gl 99.4 2.1E-12 7.3E-17 133.0 14.0 156 27-191 145-394 (1520)
12 4afx_B Protein Z dependent pro 33.0 65 0.0022 18.4 3.9 21 128-148 8-29 (36)
13 2h4p_B MENT, heterochromatin-a 30.0 69 0.0024 18.0 3.6 21 128-148 7-28 (34)
14 2xn6_B Thyroxine-binding globu 25.0 1E+02 0.0034 17.4 3.9 21 128-148 7-28 (35)
15 2riv_B Thyroxine-binding globu 24.4 1.1E+02 0.0038 17.8 3.9 21 128-148 12-33 (40)
16 1hle_B Horse leukocyte elastas 23.4 1E+02 0.0034 16.8 3.9 21 128-148 6-27 (31)
17 3ndd_B Alpha-1-antitrypsin; se 22.3 1.2E+02 0.004 17.3 3.8 21 128-148 8-29 (36)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=1.3e-34 Score=276.14 Aligned_cols=168 Identities=21% Similarity=0.417 Sum_probs=147.3
Q ss_pred hhhHHHHHHHhHccCCCCcceEECCcEEEEEee---CCCCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc---CCCC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL---AKSA 100 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~---~~~d 100 (231)
...+.+|++.|+|||||+.+++..++++|||+| .+...+.||+.+.+++++++|||+|||+.+|+++|.. ++++
T Consensus 17 ~~~~~~m~~~l~hRGpD~~G~~~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~ 96 (553)
T 1ct9_A 17 RKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTG 96 (553)
T ss_dssp HHHHHHHHHTTGGGCBTEEEEEECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSC
T ss_pred HHHHHHHHHHHhccCCCcccEEEECCEEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCC
Confidence 467889999999999999999999999999999 3444789999988889999999999999999999853 5566
Q ss_pred cHHHHHHHHHHHHhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhcc
Q 026882 101 NEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGACG 175 (231)
Q Consensus 101 ~e~~li~~ly~~~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~ 175 (231)
+|+++|+++|++ ||. +++++|+|+|||+|||.++++++++| |||||+...++.++||||+++|...+
T Consensus 97 sDtEvil~l~~~------~g~-~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~~- 168 (553)
T 1ct9_A 97 SDCEVILALYQE------KGP-EFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC- 168 (553)
T ss_dssp CTTHHHHHHHHH------HTT-TTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTTC-
T ss_pred CcHHHHHHHHHH------HHH-HHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhhc-
Confidence 666677799998 564 79999999999999999889999999 99999985467899999999998876
Q ss_pred CceEEeCCCeEEEEeCCcEEEEECCCC
Q 026882 176 KSLASFPQGCFFSTAVGGLRSFENPKN 202 (231)
Q Consensus 176 ~~v~~~ppG~~~~~~~~~~~~y~~~~~ 202 (231)
+.|+.|||||++..+++++++||++.+
T Consensus 169 ~~i~~l~pG~~~~~~~g~~~~yw~~~~ 195 (553)
T 1ct9_A 169 RTIKEFPAGSYLWSQDGEIRSYYHRDW 195 (553)
T ss_dssp SEEEECCTTEEEETTTCSEEECCCCGG
T ss_pred CCEEEECCCeEEEEcCCcEEEeecCCc
Confidence 469999999999887677999998764
No 2
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=100.00 E-value=1.4e-32 Score=236.55 Aligned_cols=168 Identities=15% Similarity=0.191 Sum_probs=139.5
Q ss_pred hhHHHHHHHhHccCCCCcceE-E---------------------------CCcEEEEEee---CCC--CCCCCCeeeeCC
Q 026882 28 TTSTALVDRFLQTNSSAVSVQ-V---------------------------GDNVTLAYTH---QNE--SPLRQRSFAVKD 74 (231)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~-~---------------------------~~~~~lgh~r---~~~--~~~~QP~~~~~~ 74 (231)
..+..|++.|+|||||+.+++ . .++++|||+| .+. ..+.||+.+ +
T Consensus 14 ~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~--~ 91 (240)
T 1xff_A 14 EILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS--E 91 (240)
T ss_dssp HHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESCHHHHHHHHHHSCCCCSEEEEEEECCSSSCSSTTTSSCEEE--T
T ss_pred HHHHHHHHHHHhcCCCcCCEEEEecCCcEEEEEcCCcHHHHHhhhhcccCCccEEEEEEeccCCCCCCcccCCCccc--C
Confidence 578899999999999999998 6 3679999999 221 367899977 7
Q ss_pred cEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCC---ChHHHHhccccceEEEEEECC-CCEEEE
Q 026882 75 EIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPY---PPNHVVGHLSGYFAFIVYDKS-TSTLFV 146 (231)
Q Consensus 75 ~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~---g~~~~l~~L~G~FAf~i~D~~-~~~l~~ 146 (231)
+++++|||+|||+.+|+++|.. +.++||+++++++|+++...|.. .+.+++++|+|+|||++||.. .++|++
T Consensus 92 ~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~g~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l~~ 171 (240)
T 1xff_A 92 HIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLA 171 (240)
T ss_dssp TEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHHHHHHHHHHHTSSCHHHHHHHHGGGCCEEEEEEEEETTCTTCEEE
T ss_pred CEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcccceEEEEEecCCCCEEEE
Confidence 8999999999999999999853 55667777778999875432311 123789999999999999985 689999
Q ss_pred Ee--ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEEC
Q 026882 147 AS--VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN 199 (231)
Q Consensus 147 aR--kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~ 199 (231)
+| |||||+.. ++.++||||++||...+.+ +.++|||++++++.++++.|..
T Consensus 172 ~Rd~~PL~~~~~-~~~~~~aSE~~al~~~~~~-~~~l~pG~~~~i~~~~~~~~~~ 224 (240)
T 1xff_A 172 ARSGSPLVIGLG-MGENFIASDQLALLPVTRR-FIFLEEGDIAEITRRSVNIFDK 224 (240)
T ss_dssp EEEBSCCEEEEC-SSCEEEESSGGGTTTTCSE-EEECCTTCEEEECSSCEEEECT
T ss_pred EECCCceEEEEe-CCEEEEEECHHHHHhhCCe-EEEECCCEEEEEECCeEEEEeC
Confidence 99 99999987 6789999999999888764 9999999999998777777754
No 3
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.98 E-value=1.4e-31 Score=250.00 Aligned_cols=188 Identities=13% Similarity=0.135 Sum_probs=149.5
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC---------------------------CcEEEEEeeC---CC--CCCCCCeee---
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTHQ---NE--SPLRQRSFA--- 71 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~lgh~r~---~~--~~~~QP~~~--- 71 (231)
...+..|+..|+|||||+.+++.. ++++|||+|. +. ..+.||+..
T Consensus 13 ~~~~~~~l~~L~hRG~D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~~l~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~ 92 (459)
T 1ao0_A 13 PQITYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQ 92 (459)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEEEECSSCEEEEEEESCHHHHTTSSCTTTCCBSEEEEEEECCC----CGGGSSSEEEBCT
T ss_pred HHHHHHHHHHHHhcCCCcCCEEEEeCCeEEEEecCCcHhhhcchhhhhccCCCEEEEEEecCCCCCCCccCCCCceeccC
Confidence 345678999999999999999763 5689999992 11 257899986
Q ss_pred eCCcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCC-CChHHHHhccccceEEEEEECCCCEEEE
Q 026882 72 VKDEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (231)
Q Consensus 72 ~~~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~-~g~~~~l~~L~G~FAf~i~D~~~~~l~~ 146 (231)
.+++++++|||+|+|+.+|+++|.. +.+++|+++++++|.++.+... ..+.+++++|+|+|||++|| .++|++
T Consensus 93 ~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~~~~~a~~~~~~~l~G~fa~~i~d--~~~l~~ 170 (459)
T 1ao0_A 93 NNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKRSGHFTLKDQIKNSLSMLKGAYAFLIMT--ETEMIV 170 (459)
T ss_dssp TTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHHHHHHHTCCCSSHHHHHHHHHTTCCEEEEEEEEC--SSEEEE
T ss_pred CCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHhhccceEEEEEe--CCEEEE
Confidence 4578999999999999999999853 6778888888899986211000 01358999999999999999 479999
Q ss_pred Ee-----ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEE--EEECCCCC------CCCCCCCcce
Q 026882 147 AS-----VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR--SFENPKNK------ITAVPAAEEE 213 (231)
Q Consensus 147 aR-----kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~--~y~~~~~~------~~~~~r~ds~ 213 (231)
+| |||||+.. ++.++||||+++|.....+.|++++||++++++.++++ +||.+... ..||+|+|+.
T Consensus 171 ~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~~~~~~~~~~~~~~~~~~c~feyiyfarp~s~ 249 (459)
T 1ao0_A 171 ALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDEGMKSERFSMNINRSICSMEYIYFSRPDSN 249 (459)
T ss_dssp EECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTEEEEEESCSSCCCCEEHHHHHTTSCTTCE
T ss_pred EECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEECCceEEEecCCCccccccceeeeeccCCcch
Confidence 99 99999998 67899999999998875567999999999988777655 56654331 2288999998
Q ss_pred eeCc
Q 026882 214 IWGA 217 (231)
Q Consensus 214 ~~g~ 217 (231)
+.+.
T Consensus 250 ~~~~ 253 (459)
T 1ao0_A 250 IDGI 253 (459)
T ss_dssp ETTE
T ss_pred hccH
Confidence 6664
No 4
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.97 E-value=2.3e-29 Score=242.08 Aligned_cols=169 Identities=15% Similarity=0.179 Sum_probs=141.8
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC----------------------------CcEEEEEee---CCC--CCCCCCeeeeC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTH---QNE--SPLRQRSFAVK 73 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~lgh~r---~~~--~~~~QP~~~~~ 73 (231)
...+..|++.|+|||||+.+++.. ++++|||+| .+. ..+.||+.+
T Consensus 13 ~~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~l~~~l~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~-- 90 (608)
T 2bpl_A 13 AEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS-- 90 (608)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESSHHHHHHHHHHSCCCCSEEEEEEECCCSSSCCGGGCSCEEE--
T ss_pred HHHHHHHHHHHHhcCCCcCceEEEecCCcEEEEeCCCcHHHHHHHhhccCCCCCEEEEEEccCCCCCCCccCCCCccC--
Confidence 457889999999999999999853 568999999 121 367899987
Q ss_pred CcEEEEEeeEEcchHHHHHHhCc----CCCCcHHHHHHHHHHHHhccCCC---ChHHHHhccccceEEEEEECCC-CEEE
Q 026882 74 DEIFCLFEGALDNLGSLRQQYGL----AKSANEVILVIEAYKALRDRAPY---PPNHVVGHLSGYFAFIVYDKST-STLF 145 (231)
Q Consensus 74 ~~~~lv~nGeI~N~~eL~~~l~~----~~~d~e~~li~~ly~~~~~~g~~---g~~~~l~~L~G~FAf~i~D~~~-~~l~ 145 (231)
++++++|||+|+|+.+||++|.. +.++||+++++++|+++.++|.. .+.+++++|+|+|||++||.++ ++++
T Consensus 91 ~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi~~l~~~~~~~g~~~~~av~~~~~~l~G~fa~~i~d~~~~~~l~ 170 (608)
T 2bpl_A 91 EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLL 170 (608)
T ss_dssp TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHHHHHHHHHHTTCCCHHHHHHHHGGGCCSSEEEEEEETTCTTCEE
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcCceEEEEEecCCCCEEE
Confidence 78999999999999999999853 67788888888999985443421 2347899999999999999987 8999
Q ss_pred EEe--ecEEEEEecCCeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCcEEEEEC
Q 026882 146 VAS--VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN 199 (231)
Q Consensus 146 ~aR--kPLyyg~~~~g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~~~~y~~ 199 (231)
++| |||||+.. ++.++||||+++|...+. .+..++||++++++.++++.+..
T Consensus 171 ~aRd~~PL~~g~~-~~~~~~aSe~~al~~~~~-~~~~l~~G~i~~i~~~~~~~~~~ 224 (608)
T 2bpl_A 171 AARSGSPLVIGLG-MGENFIASDQLALLPVTR-RFIFLEEGDIAEITRRSVNIFDK 224 (608)
T ss_dssp EEEEBSCCEEEEC-SSCEEEESSGGGTTTTCC-EEEECCTTCEEEECSSCEEEECS
T ss_pred EEECCCceEEEEe-CCeEEEEechHHHHhcCC-eEEEECCCeEEEEECCeEEEEeC
Confidence 999 99999987 678999999999998875 59999999999887777776643
No 5
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.96 E-value=2.1e-28 Score=230.99 Aligned_cols=190 Identities=13% Similarity=0.086 Sum_probs=147.8
Q ss_pred hhhHHHHHHHhHccCCCCcceEEC----------------------------CcEEEEEeeC---CC--CCCCCCeeeeC
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTHQ---NE--SPLRQRSFAVK 73 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~lgh~r~---~~--~~~~QP~~~~~ 73 (231)
...+..|+..|+|||||+.+++.. ++++|||+|. +. ..+.||+....
T Consensus 13 ~~~l~~~l~~LqhRG~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~~~~l~g~~~igH~R~sT~G~~~~~n~QP~~~~~ 92 (504)
T 1ecf_A 13 NQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNS 92 (504)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEEEECTTSCEEEEEEESCHHHHCCHHHHHHCCSSEEEEEEECCBTTBCTTSCCSCEEECS
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEcCCCcEEEEecCCchhhhcCccccccCCCCEEEEEEccCcCCCCCccccCCeEecc
Confidence 346789999999999999999863 4689999991 21 36899997643
Q ss_pred -CcEEEEEeeEEcchHHHHHHhCc-----CCCCcHHHHHHHHHHHHhcc-CC---------CChHHHHhccccceEEEEE
Q 026882 74 -DEIFCLFEGALDNLGSLRQQYGL-----AKSANEVILVIEAYKALRDR-AP---------YPPNHVVGHLSGYFAFIVY 137 (231)
Q Consensus 74 -~~~~lv~nGeI~N~~eL~~~l~~-----~~~d~e~~li~~ly~~~~~~-g~---------~g~~~~l~~L~G~FAf~i~ 137 (231)
++++++|||+|+|+.+|+++|.. +.+++|+++++++|.++.+. |. .++.+++++|+|+|||++|
T Consensus 93 ~~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l~G~fa~v~~ 172 (504)
T 1ecf_A 93 PYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAM 172 (504)
T ss_dssp SSCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHhccccccccccHHHHHHHhhhhcCccceEEEE
Confidence 56999999999999999998842 57788888888999875331 21 0123689999999999999
Q ss_pred ECCCCEEEEEe-----ecEEEEEec--C--CeEEEEeChhhHhhhccCceEEeCCCeEEEEeCCc-EEEEE---CCCCCC
Q 026882 138 DKSTSTLFVAS-----VPLYWGITA--D--GHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG-LRSFE---NPKNKI 204 (231)
Q Consensus 138 D~~~~~l~~aR-----kPLyyg~~~--~--g~~~fASe~~aL~~~~~~~v~~~ppG~~~~~~~~~-~~~y~---~~~~~~ 204 (231)
+.. ++|+++| |||||+..+ + +.++||||.+||.....+.|++++||++++++.++ +.+.. .+.+..
T Consensus 173 ~~~-~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l~PGe~v~i~~~g~~~~~~~~~~~~~~~ 251 (504)
T 1ecf_A 173 IIG-HGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNP 251 (504)
T ss_dssp ETT-TEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTCCEEEEECSSSCCCCC
T ss_pred EcC-CeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEECCCCeEEEEeCCCceecceecCCCCCCc
Confidence 853 5799999 999999872 3 47999999999988876679999999998776554 44322 122333
Q ss_pred C-----CCCCCcceeeCc
Q 026882 205 T-----AVPAAEEEIWGA 217 (231)
Q Consensus 205 ~-----~~~r~ds~~~g~ 217 (231)
. |++|+|+.+.+.
T Consensus 252 c~fe~iYfarP~s~i~~~ 269 (504)
T 1ecf_A 252 CLFEYVYFARPDSFIDKI 269 (504)
T ss_dssp BHHHHHTTSCTTCEETTE
T ss_pred cEEEEehhcChHHHhhhc
Confidence 3 789999998887
No 6
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.93 E-value=2.4e-25 Score=210.48 Aligned_cols=144 Identities=19% Similarity=0.238 Sum_probs=117.3
Q ss_pred HccCCCCcceEECCcEEEEEeeCCCCCCCCCeeeeC----CcEEEEEeeEEcchHHHHHHhC-cCCCCcHHHHHHHHHHH
Q 026882 38 LQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVK----DEIFCLFEGALDNLGSLRQQYG-LAKSANEVILVIEAYKA 112 (231)
Q Consensus 38 ~~RGpd~~~~~~~~~~~lgh~r~~~~~~~QP~~~~~----~~~~lv~nGeI~N~~eL~~~l~-~~~~d~e~~li~~ly~~ 112 (231)
.+|||+..+.+... ..-.||++..+ ++++++|||+|||+.+|+++|. .+++++|+++|+++|++
T Consensus 40 ~~r~p~~~~~~~~~-----------~~~~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEvil~l~~~ 108 (513)
T 1jgt_A 40 PQGERSLAATLVHA-----------PSVAPDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAELVLRLLER 108 (513)
T ss_dssp TTGGGSCEEEEEEC-----------TTSCGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHHHHHHHHH
T ss_pred ccCCCccccceeeC-----------CccCCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 46777776544321 12278987654 7899999999999999999984 26778888888999998
Q ss_pred HhccCCCChHHHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhc-------------
Q 026882 113 LRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGAC------------- 174 (231)
Q Consensus 113 ~~~~g~~g~~~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~------------- 174 (231)
||. +++++|+|+|||+|||.. +++++| |||||+.. ++.++||||+++|...+
T Consensus 109 ------~g~-~~~~~l~G~fA~~i~d~~--~l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~~~ 178 (513)
T 1jgt_A 109 ------YDL-HAFRLVNGRFATVVRTGD--RVLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADARRV 178 (513)
T ss_dssp ------HGG-GGGGTCCEEEEEEEEETT--EEEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSEEC
T ss_pred ------HhH-HhHhhcCeeEEEEEEECC--EEEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCCcc
Confidence 664 799999999999999975 499999 99999987 78999999999998876
Q ss_pred --cCceEEeCCCeEEEEe--CCc--EEEEECCCC
Q 026882 175 --GKSLASFPQGCFFSTA--VGG--LRSFENPKN 202 (231)
Q Consensus 175 --~~~v~~~ppG~~~~~~--~~~--~~~y~~~~~ 202 (231)
.+.|+.+||||++.++ +++ .++||++..
T Consensus 179 t~~~~i~~l~pG~~l~i~~~~g~~~~~~yw~~~~ 212 (513)
T 1jgt_A 179 AGLTGVYQVPAGAVMDIDLGSGTAVTHRTWTPGL 212 (513)
T ss_dssp SSCSSCEECCTTEEEEEETTTTEEEEEECCCCCC
T ss_pred ccccceEEcCCCcEEEEEcCCCCEEEEeecCCcc
Confidence 2679999999999887 565 468988654
No 7
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.91 E-value=5.5e-25 Score=207.52 Aligned_cols=142 Identities=14% Similarity=0.117 Sum_probs=118.8
Q ss_pred CcEEEEEee--CCCCCCCCCeeeeCCcEEEEEeeEEcchH---HHHHHhCc-CCCCcHHHHHHHHHHHHhccCCCChHHH
Q 026882 51 DNVTLAYTH--QNESPLRQRSFAVKDEIFCLFEGALDNLG---SLRQQYGL-AKSANEVILVIEAYKALRDRAPYPPNHV 124 (231)
Q Consensus 51 ~~~~lgh~r--~~~~~~~QP~~~~~~~~~lv~nGeI~N~~---eL~~~l~~-~~~d~e~~li~~ly~~~~~~g~~g~~~~ 124 (231)
++++|||+| ++...+.||+.+.+++++++ |+|||+. +|+++|.. +.+++|+++++++|++ ||. ++
T Consensus 26 ~~~~igh~R~~t~~~~~~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEvil~l~~~------~g~-~~ 96 (503)
T 1q15_A 26 KGEALSNGYLFIEQNGHYQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAELLALLFTR------LGA-NA 96 (503)
T ss_dssp EEEEETTEEEEEETTCCEEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHHHHHHHHH------HCG-GG
T ss_pred CceeEeeeeEEEcCCCCCCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHHHHHHHHH------HHH-HH
Confidence 478999999 44567899998877788887 9999999 99998852 4567788888899998 664 79
Q ss_pred HhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCe-----------------EEEEeChhhHhhh-------cc
Q 026882 125 VGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGH-----------------VAFADDADLLKGA-------CG 175 (231)
Q Consensus 125 l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~-----------------~~fASe~~aL~~~-------~~ 175 (231)
+++|+|+|||++||..++ ++++| |||||+.. ++. ++||||+++|... ..
T Consensus 97 l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T~~ 174 (503)
T 1q15_A 97 LALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTPV 174 (503)
T ss_dssp GGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCCSB
T ss_pred HHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCccc
Confidence 999999999999999878 99999 99999987 567 9999999999875 13
Q ss_pred CceEEeCCCeEEEEeCCc------EEEEECCCCC
Q 026882 176 KSLASFPQGCFFSTAVGG------LRSFENPKNK 203 (231)
Q Consensus 176 ~~v~~~ppG~~~~~~~~~------~~~y~~~~~~ 203 (231)
+.|+.+|||+++.++.++ .++||++...
T Consensus 175 ~~v~~l~pG~~~~i~~~g~~~~~~~~~yw~~~~~ 208 (503)
T 1q15_A 175 KNAQRLKPGAVHVLTHDSEGYSFVESRTLTTPAS 208 (503)
T ss_dssp TTEEECCSSEEEEEEECTTCCEEEEEEESCCCCC
T ss_pred CCeEEECCCeEEEEeCCCcccccceeeecCCccc
Confidence 579999999998776543 6789986543
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.86 E-value=2.7e-21 Score=169.51 Aligned_cols=140 Identities=12% Similarity=0.129 Sum_probs=102.7
Q ss_pred cEEEEEee--C-C--CCCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhCc---------CCCCcHHHHHHHHHHHHhccC
Q 026882 52 NVTLAYTH--Q-N--ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGL---------AKSANEVILVIEAYKALRDRA 117 (231)
Q Consensus 52 ~~~lgh~r--~-~--~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~~---------~~~d~e~~li~~ly~~~~~~g 117 (231)
.++|||+| + + ...+.||+.. ++++++|||+|+|+.+||++|.. ..++||+|+++++|......+
T Consensus 82 ~~~igHvR~AT~g~~s~~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi~~l~~~~~~~~ 159 (274)
T 3mdn_A 82 GLFLSHVRASTGSCISRNNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLALSEGLEH 159 (274)
T ss_dssp EEEEEEC------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHHHHHHHHTTTTT
T ss_pred CEEEEEEccccCCCCcccCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHHHHHHHHhhhcC
Confidence 57899999 1 2 1368899976 78999999999999999988742 257788888889996521111
Q ss_pred C--CChHHHHhccccc-----------eEEEEEECCCCEEEEEe------ecEEEEEecC--CeEEEEeChhhHhhhccC
Q 026882 118 P--YPPNHVVGHLSGY-----------FAFIVYDKSTSTLFVAS------VPLYWGITAD--GHVAFADDADLLKGACGK 176 (231)
Q Consensus 118 ~--~g~~~~l~~L~G~-----------FAf~i~D~~~~~l~~aR------kPLyyg~~~~--g~~~fASe~~aL~~~~~~ 176 (231)
. .++.+++++|+|+ |+|+++|. ++|+++| +||+|+...+ +.++||||. |...+ +
T Consensus 160 ~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~~~~-~ 234 (274)
T 3mdn_A 160 DPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG--QTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LETDE-G 234 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECS--SCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C--CC-S
T ss_pred CHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcC--CEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--cccCC-c
Confidence 1 1234789999998 99999984 7899999 6977776533 789999999 43333 4
Q ss_pred ceEEeCCCeEEEEeCCcEEEEE
Q 026882 177 SLASFPQGCFFSTAVGGLRSFE 198 (231)
Q Consensus 177 ~v~~~ppG~~~~~~~~~~~~y~ 198 (231)
.|++++||+++++++++++.+.
T Consensus 235 ~~~~v~pGeiv~i~~~~v~~~~ 256 (274)
T 3mdn_A 235 DWTELRPGRMLTIGAEGAAERD 256 (274)
T ss_dssp CCEECCSSEEEEEETTEEEEEE
T ss_pred eEEEECcCEEEEEeCCeEEEEE
Confidence 5999999999998887776653
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.74 E-value=3e-18 Score=148.78 Aligned_cols=137 Identities=12% Similarity=0.030 Sum_probs=100.5
Q ss_pred cEEEEEee-CC----CCCCCCCeeee--CCcEEEEEeeEEcchHHHHHHhCcCCCCcHHHHHHHHHHHHhcc--C--C--
Q 026882 52 NVTLAYTH-QN----ESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDR--A--P-- 118 (231)
Q Consensus 52 ~~~lgh~r-~~----~~~~~QP~~~~--~~~~~lv~nGeI~N~~eL~~~l~~~~~d~e~~li~~ly~~~~~~--g--~-- 118 (231)
+++|||+| .. ...+.||+... .++++++|||.|.|+++ |.++..+.++||+|++++++.+..+. + +
T Consensus 72 ~~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi~~li~~~~~~~~~~~~~~ 150 (257)
T 1te5_A 72 ETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPV 150 (257)
T ss_dssp EEEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHHHHHHHHHHHHHCSSCCCH
T ss_pred cEEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHHHHHHHHHHHHhcCCCchH
Confidence 57999999 11 23678999764 46799999999999999 76654567777777877888764321 1 1
Q ss_pred CChHHHHhccc------cceEEEEEECCCCEEEEEe-ecEEEEEe-----------------------c-CCeEEEEeCh
Q 026882 119 YPPNHVVGHLS------GYFAFIVYDKSTSTLFVAS-VPLYWGIT-----------------------A-DGHVAFADDA 167 (231)
Q Consensus 119 ~g~~~~l~~L~------G~FAf~i~D~~~~~l~~aR-kPLyyg~~-----------------------~-~g~~~fASe~ 167 (231)
..+.+++.+|. |.|+|++.|. ++|+++| .||||... . ++.++||||.
T Consensus 151 ~a~~~al~~l~~~~~~~G~~n~~l~~g--~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~~~vvASE~ 228 (257)
T 1te5_A 151 EVLLPVLISACDEYRKKGVFNALISDG--DWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEP 228 (257)
T ss_dssp HHHHHHHHHHHHHHHTTBCCEEEEESS--SCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEEcC--CEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCCEEEEEeCc
Confidence 12335565655 9999999884 7899999 88988643 1 2368999995
Q ss_pred hhHhhhccCceEEeCCCeEEEEeCCcEE
Q 026882 168 DLLKGACGKSLASFPQGCFFSTAVGGLR 195 (231)
Q Consensus 168 ~aL~~~~~~~v~~~ppG~~~~~~~~~~~ 195 (231)
|.. .+.|++++||++++++++++.
T Consensus 229 --l~~--~~~wr~v~pGe~v~i~~~~~~ 252 (257)
T 1te5_A 229 --LTD--NENWTLQQSGEWVLWWGGEVL 252 (257)
T ss_dssp --SSS--SSSCEEECTTCEEEEETTEEE
T ss_pred --cCC--CCCeeEeCCCEEEEEECCEEE
Confidence 543 357999999999998777654
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.47 E-value=2.8e-13 Score=139.19 Aligned_cols=132 Identities=12% Similarity=0.143 Sum_probs=98.4
Q ss_pred CcEEEEEee--CCC---CCCCCCeeeeCCcEEEEEeeEEcchHHHHHHhC--------------------c-CCCCcHHH
Q 026882 51 DNVTLAYTH--QNE---SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG--------------------L-AKSANEVI 104 (231)
Q Consensus 51 ~~~~lgh~r--~~~---~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~--------------------~-~~~d~e~~ 104 (231)
++++|||+| ++. -.+.||+. +|+|||||.|+..+|+.+. . +.+.+|++
T Consensus 202 g~~aigH~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSe 275 (1479)
T 1ea0_A 202 SDFAIYHQRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSG 275 (1479)
T ss_dssp BSEEEEEECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHH
T ss_pred eeEEEeeecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHH
Confidence 368999999 222 26789984 2899999999999996641 1 45667777
Q ss_pred HHHHHHHHHhccCCCChH-----------------------------HHHhccccceEEEEEECCCCEEEEEe-----ec
Q 026882 105 LVIEAYKALRDRAPYPPN-----------------------------HVVGHLSGYFAFIVYDKSTSTLFVAS-----VP 150 (231)
Q Consensus 105 li~~ly~~~~~~g~~g~~-----------------------------~~l~~L~G~FAf~i~D~~~~~l~~aR-----kP 150 (231)
++.++++.+...| ..+. .+++.++|.||+++.|. +.++++| ||
T Consensus 276 vld~~lelL~~~g-~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~dg--~~l~a~~DrnGlRP 352 (1479)
T 1ea0_A 276 SLDTVFEVMVRAG-RTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTDG--RWVVGGMDRNGLRP 352 (1479)
T ss_dssp HHHHHHHHHHHTT-CCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECSS--SEEEEECCTTCCSC
T ss_pred HHHHHHHHHHHcC-CCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEeC--CEEEEEecCCCCcc
Confidence 7745554322222 1111 34679999999999774 7999999 99
Q ss_pred EEEEEecCCeEEEEeChhhHhhhccCceE--EeCCCeEEEEeC
Q 026882 151 LYWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAV 191 (231)
Q Consensus 151 Lyyg~~~~g~~~fASe~~aL~~~~~~~v~--~~ppG~~~~~~~ 191 (231)
|.|+.++|+.+++|||..+|...+.+.++ ++.||+++.++.
T Consensus 353 l~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~ 395 (1479)
T 1ea0_A 353 MRYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDL 395 (1479)
T ss_dssp CEEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEET
T ss_pred eEEEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEEC
Confidence 99999877889999999999766656566 999999988753
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.39 E-value=2.1e-12 Score=132.99 Aligned_cols=156 Identities=12% Similarity=0.096 Sum_probs=111.5
Q ss_pred hhhHHHHHHHhHccCCCCcceEE-----------------------------CCcEEEEEee--CCCC---CCCCCeeee
Q 026882 27 KTTSTALVDRFLQTNSSAVSVQV-----------------------------GDNVTLAYTH--QNES---PLRQRSFAV 72 (231)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~-----------------------------~~~~~lgh~r--~~~~---~~~QP~~~~ 72 (231)
...+....+.+.||+.++..+.. .+.++|+|+| ++.. .+.||+.
T Consensus 145 ~r~ly~~r~~le~~~~~~~yI~S~s~~~~vyKgmgl~~~v~~~y~dL~~~~~~g~~aigH~RySTnt~p~w~~AQPf~-- 222 (1520)
T 1ofd_A 145 DRRLYIARSIIGKKLAEDFYVCSFSCRTIVYKGMVRSIILGEFYLDLKNPGYTSNFAVYHRRFSTNTMPKWPLAQPMR-- 222 (1520)
T ss_dssp HHHHHHHHHHHGGGCBTTBEEEEEESSEEEEEESSCHHHHHHHBHHHHCTTCCBSEEEEEECCCSSSCCCGGGSSCCS--
T ss_pred HHHHHHHHHHHHhhccCCEEEEEecCcEEEEeCCccHHHHhhhhhhccccccceeEEEEEccccCCCCCCcccCCchh--
Confidence 34566778889999854343332 2368999999 2221 5689974
Q ss_pred CCcEEEEEeeEEcchHHHH------HH------h--------C--cCCCCcHHHHHHHHHHHHhccCCCChH--------
Q 026882 73 KDEIFCLFEGALDNLGSLR------QQ------Y--------G--LAKSANEVILVIEAYKALRDRAPYPPN-------- 122 (231)
Q Consensus 73 ~~~~~lv~nGeI~N~~eL~------~~------l--------~--~~~~d~e~~li~~ly~~~~~~g~~g~~-------- 122 (231)
+|+|||||.|+..+| +. + . .+.+.+|++++.++++-+...| ..+.
T Consensus 223 ----~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe~ld~~lelL~~~g-~~l~~A~~~liP 297 (1520)
T 1ofd_A 223 ----LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSYNLDSALELLVRTG-RSPLEAAMILVP 297 (1520)
T ss_dssp ----SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHHHHHHHHHHHHHTT-CCHHHHHHHHSC
T ss_pred ----eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHHHHHHHHHHHHhcC-CCHHHHHHHhCc
Confidence 389999999998888 32 1 1 1456677777655554322222 1111
Q ss_pred -----------------------HHHhccccceEEEEEECCCCEEEEEe-----ecEEEEEecCCeEEEEeChhhHhhhc
Q 026882 123 -----------------------HVVGHLSGYFAFIVYDKSTSTLFVAS-----VPLYWGITADGHVAFADDADLLKGAC 174 (231)
Q Consensus 123 -----------------------~~l~~L~G~FAf~i~D~~~~~l~~aR-----kPLyyg~~~~g~~~fASe~~aL~~~~ 174 (231)
.+++.++|.||+++.|. +.++++| |||.|+.++|+.+++|||..+|...+
T Consensus 298 eaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg--~~l~a~~DrnGlRPl~~~~t~d~~~v~ASE~galdi~~ 375 (1520)
T 1ofd_A 298 EAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDG--KIVGAGLDRNGLRPARYCITKDDYIVLGSEAGVVDLPE 375 (1520)
T ss_dssp CCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECS--SEEEEEECTTCCSCCEEEEETTCCEEEESSTTCSCCCG
T ss_pred chhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEeC--CEEEEEecCCCCCceEEEEeCCCEEEEEcccccccCcc
Confidence 23578999999999885 7999999 99999998777899999999997666
Q ss_pred cCceE--EeCCCeEEEEeC
Q 026882 175 GKSLA--SFPQGCFFSTAV 191 (231)
Q Consensus 175 ~~~v~--~~ppG~~~~~~~ 191 (231)
.+.++ ++.||+++.++.
T Consensus 376 a~~vrkg~l~PGemv~id~ 394 (1520)
T 1ofd_A 376 VDIVEKGRLAPGQMIAVDL 394 (1520)
T ss_dssp GGEEEEEECCTTCEEEEET
T ss_pred hheeeccCCCCCeEEEEEC
Confidence 66667 999999988753
No 12
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=33.05 E-value=65 Score=18.42 Aligned_cols=21 Identities=24% Similarity=0.724 Sum_probs=15.4
Q ss_pred cccceEEEEEECCCCE-EEEEe
Q 026882 128 LSGYFAFIVYDKSTST-LFVAS 148 (231)
Q Consensus 128 L~G~FAf~i~D~~~~~-l~~aR 148 (231)
++-.|-|+|+|..++. +|++|
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 4afx_B 8 IDRPFHFMIYEETSGMLLFLGR 29 (36)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred eeCCEEEEEEECCCCcEEEEEE
Confidence 4667899999987665 56665
No 13
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=30.04 E-value=69 Score=17.96 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=14.5
Q ss_pred cccceEEEEEECCCCE-EEEEe
Q 026882 128 LSGYFAFIVYDKSTST-LFVAS 148 (231)
Q Consensus 128 L~G~FAf~i~D~~~~~-l~~aR 148 (231)
.+=.|-|+|+|..++. ||++|
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G~ 28 (34)
T 2h4p_B 7 VDHPFHFFIRHNKSKTILFFGR 28 (34)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCeEEEEEE
Confidence 3557888999887664 46655
No 14
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=25.03 E-value=1e+02 Score=17.43 Aligned_cols=21 Identities=24% Similarity=0.626 Sum_probs=15.0
Q ss_pred cccceEEEEEECCCCE-EEEEe
Q 026882 128 LSGYFAFIVYDKSTST-LFVAS 148 (231)
Q Consensus 128 L~G~FAf~i~D~~~~~-l~~aR 148 (231)
.+=.|-|+|+|..++. +|++|
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G~ 28 (35)
T 2xn6_B 7 IDRSFMLLILERSTRSILFLGK 28 (35)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEEE
Confidence 4557889999987664 56665
No 15
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=24.43 E-value=1.1e+02 Score=17.85 Aligned_cols=21 Identities=24% Similarity=0.626 Sum_probs=15.5
Q ss_pred cccceEEEEEECCCCE-EEEEe
Q 026882 128 LSGYFAFIVYDKSTST-LFVAS 148 (231)
Q Consensus 128 L~G~FAf~i~D~~~~~-l~~aR 148 (231)
.+=.|-|+|+|..++. ||++|
T Consensus 12 ~drPFlf~I~~~~t~~iLF~G~ 33 (40)
T 2riv_B 12 IDRSFMLLILERSTRSILFLGK 33 (40)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEeCCCCcEEEEEE
Confidence 5678999999987664 56665
No 16
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=23.44 E-value=1e+02 Score=16.84 Aligned_cols=21 Identities=19% Similarity=0.447 Sum_probs=14.1
Q ss_pred cccceEEEEEECCCCE-EEEEe
Q 026882 128 LSGYFAFIVYDKSTST-LFVAS 148 (231)
Q Consensus 128 L~G~FAf~i~D~~~~~-l~~aR 148 (231)
.+=.|-|+|+|..++. |+++|
T Consensus 6 ~drPFlf~I~~~~t~~iLF~G~ 27 (31)
T 1hle_B 6 ADHPFIFFIRHNPSANILFLGR 27 (31)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred EeCCEEEEEEECCCCcEEEEEE
Confidence 3556888888877664 45554
No 17
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=22.31 E-value=1.2e+02 Score=17.27 Aligned_cols=21 Identities=24% Similarity=0.596 Sum_probs=15.5
Q ss_pred cccceEEEEEECCCC-EEEEEe
Q 026882 128 LSGYFAFIVYDKSTS-TLFVAS 148 (231)
Q Consensus 128 L~G~FAf~i~D~~~~-~l~~aR 148 (231)
++-.|-|+|+|..++ -||++|
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 3ndd_B 8 FNKPFVFLMIEQNTKSPLFMGK 29 (36)
T ss_dssp CCSCEEEEEEETTTCCEEEEEE
T ss_pred eeCCEEEEEEECCCCcEEEEEE
Confidence 466799999998765 456666
Done!