Query 026885
Match_columns 231
No_of_seqs 176 out of 1355
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 00:36:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 99.8 2.3E-18 8E-23 153.2 19.0 198 2-230 155-356 (425)
2 3nrn_A Uncharacterized protein 99.7 8.1E-16 2.8E-20 137.0 19.3 193 2-230 148-340 (421)
3 4dgk_A Phytoene dehydrogenase; 99.6 5.3E-15 1.8E-19 134.4 16.3 169 38-229 213-403 (501)
4 3nks_A Protoporphyrinogen oxid 99.6 3E-14 1E-18 128.5 17.0 201 1-230 162-400 (477)
5 4dsg_A UDP-galactopyranose mut 99.5 1.8E-13 6.3E-18 124.7 14.3 201 1-230 155-377 (484)
6 3i6d_A Protoporphyrinogen oxid 99.5 2.2E-13 7.5E-18 122.1 13.9 201 1-230 168-394 (470)
7 4gde_A UDP-galactopyranose mut 99.5 7.8E-14 2.7E-18 126.6 10.7 201 1-230 161-401 (513)
8 1s3e_A Amine oxidase [flavin-c 99.5 5.3E-13 1.8E-17 122.1 14.3 199 2-230 165-371 (520)
9 2ivd_A PPO, PPOX, protoporphyr 99.5 1.6E-12 5.6E-17 117.2 16.8 201 1-230 167-400 (478)
10 3lov_A Protoporphyrinogen oxid 99.5 3.3E-13 1.1E-17 121.8 11.4 195 1-230 166-391 (475)
11 2vvm_A Monoamine oxidase N; FA 99.4 9.2E-12 3.2E-16 112.9 14.2 139 1-149 206-349 (495)
12 2yg5_A Putrescine oxidase; oxi 99.3 3.3E-12 1.1E-16 114.4 10.1 196 2-230 165-369 (453)
13 1sez_A Protoporphyrinogen oxid 99.3 7.4E-12 2.5E-16 113.7 11.6 203 1-230 168-420 (504)
14 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 8E-10 2.7E-14 95.5 14.1 161 42-230 108-273 (342)
15 1b37_A Protein (polyamine oxid 99.1 1E-10 3.5E-15 105.7 7.9 163 40-230 200-376 (472)
16 2jae_A L-amino acid oxidase; o 99.1 4.4E-10 1.5E-14 101.7 10.6 164 37-230 230-398 (489)
17 3p1w_A Rabgdi protein; GDI RAB 99.0 7.1E-10 2.4E-14 100.7 7.8 90 13-111 220-313 (475)
18 2iid_A L-amino-acid oxidase; f 98.9 4.4E-08 1.5E-12 88.7 14.9 161 37-230 232-400 (498)
19 1d5t_A Guanine nucleotide diss 98.7 2.7E-07 9.3E-12 82.6 13.2 90 13-112 198-290 (433)
20 2b9w_A Putative aminooxidase; 98.6 2.3E-07 8E-12 82.0 11.1 112 10-139 169-282 (424)
21 2z3y_A Lysine-specific histone 98.5 4E-07 1.4E-11 85.8 11.3 98 39-150 394-500 (662)
22 2xag_A Lysine-specific histone 98.5 4.4E-07 1.5E-11 87.8 10.4 100 39-150 565-671 (852)
23 1yvv_A Amine oxidase, flavin-c 98.5 4.3E-06 1.5E-10 71.2 15.2 148 51-230 110-260 (336)
24 1vg0_A RAB proteins geranylger 98.5 1.3E-06 4.4E-11 81.9 12.5 113 17-150 346-461 (650)
25 3k7m_X 6-hydroxy-L-nicotine ox 98.4 8.5E-06 2.9E-10 72.0 16.9 132 4-150 162-297 (431)
26 4gut_A Lysine-specific histone 98.4 6.1E-07 2.1E-11 86.0 9.8 145 60-230 542-694 (776)
27 2bcg_G Secretory pathway GDP d 98.3 3.1E-06 1E-10 76.1 10.3 66 36-111 232-299 (453)
28 1rsg_A FMS1 protein; FAD bindi 98.3 2.3E-06 7.7E-11 78.0 8.6 98 39-150 196-306 (516)
29 3hdq_A UDP-galactopyranose mut 98.2 3.5E-07 1.2E-11 81.2 2.4 110 1-148 175-287 (397)
30 1i8t_A UDP-galactopyranose mut 98.1 9.5E-08 3.2E-12 83.8 -3.5 111 1-149 147-260 (367)
31 1v0j_A UDP-galactopyranose mut 97.8 5.7E-07 1.9E-11 79.6 -4.3 113 1-148 157-273 (399)
32 2bi7_A UDP-galactopyranose mut 97.7 2.5E-06 8.6E-11 75.1 -2.3 107 1-147 151-261 (384)
33 3dje_A Fructosyl amine: oxygen 97.4 0.00035 1.2E-08 61.7 8.1 57 48-112 162-221 (438)
34 3ayj_A Pro-enzyme of L-phenyla 97.3 0.00067 2.3E-08 64.4 9.3 109 36-150 337-493 (721)
35 3lxd_A FAD-dependent pyridine 97.3 0.00069 2.4E-08 59.7 8.0 57 46-110 193-249 (415)
36 3fg2_P Putative rubredoxin red 97.3 0.00069 2.4E-08 59.5 7.8 57 46-110 183-239 (404)
37 2i0z_A NAD(FAD)-utilizing dehy 97.1 0.0012 4.1E-08 58.9 7.8 58 46-111 133-190 (447)
38 4at0_A 3-ketosteroid-delta4-5a 97.0 0.0013 4.4E-08 59.7 7.3 57 48-110 203-262 (510)
39 3dme_A Conserved exported prot 97.0 0.0016 5.4E-08 55.5 7.1 57 48-112 151-209 (369)
40 3nlc_A Uncharacterized protein 97.0 0.0016 5.5E-08 60.0 7.5 57 48-112 221-277 (549)
41 3nyc_A D-arginine dehydrogenas 96.8 0.0023 7.9E-08 54.9 7.2 55 48-112 155-209 (381)
42 1y56_B Sarcosine oxidase; dehy 96.8 0.004 1.4E-07 53.7 8.6 56 48-112 150-205 (382)
43 3cgv_A Geranylgeranyl reductas 96.7 0.0032 1.1E-07 54.4 7.1 64 48-116 103-167 (397)
44 3ef6_A Toluene 1,2-dioxygenase 96.6 0.0022 7.6E-08 56.5 5.6 55 47-110 185-239 (410)
45 1y0p_A Fumarate reductase flav 96.6 0.0053 1.8E-07 56.5 8.2 59 47-110 255-315 (571)
46 2gag_B Heterotetrameric sarcos 96.6 0.004 1.4E-07 54.0 7.0 55 48-111 175-229 (405)
47 3da1_A Glycerol-3-phosphate de 96.6 0.0055 1.9E-07 56.4 7.9 65 48-117 171-239 (561)
48 3iwa_A FAD-dependent pyridine 96.5 0.0083 2.9E-07 53.6 8.6 56 46-110 201-256 (472)
49 1trb_A Thioredoxin reductase; 96.5 0.007 2.4E-07 50.6 7.7 59 48-111 185-246 (320)
50 1q1r_A Putidaredoxin reductase 96.5 0.0059 2E-07 54.1 7.5 56 47-110 191-248 (431)
51 3ps9_A TRNA 5-methylaminomethy 96.5 0.0058 2E-07 57.4 7.6 56 48-112 418-473 (676)
52 2cdu_A NADPH oxidase; flavoenz 96.4 0.0065 2.2E-07 54.1 7.4 56 46-110 190-245 (452)
53 3axb_A Putative oxidoreductase 96.4 0.0058 2E-07 54.0 7.0 56 48-112 182-254 (448)
54 1d4d_A Flavocytochrome C fumar 96.4 0.008 2.7E-07 55.4 7.8 59 47-110 255-315 (572)
55 1qo8_A Flavocytochrome C3 fuma 96.3 0.0088 3E-07 54.9 7.9 59 47-110 250-310 (566)
56 1pj5_A N,N-dimethylglycine oxi 96.3 0.01 3.6E-07 57.0 8.5 56 48-112 152-207 (830)
57 3pvc_A TRNA 5-methylaminomethy 96.3 0.0075 2.6E-07 56.8 7.4 55 48-111 413-468 (689)
58 2rgh_A Alpha-glycerophosphate 96.3 0.01 3.5E-07 54.7 8.2 60 48-112 189-250 (571)
59 1ryi_A Glycine oxidase; flavop 96.3 0.0088 3E-07 51.4 7.1 54 48-111 165-218 (382)
60 3atr_A Conserved archaeal prot 96.2 0.019 6.5E-07 51.0 8.9 66 48-118 101-169 (453)
61 2wdq_A Succinate dehydrogenase 96.1 0.014 4.8E-07 54.1 8.1 59 48-110 144-204 (588)
62 2cul_A Glucose-inhibited divis 96.1 0.012 4E-07 47.6 6.5 56 48-112 69-125 (232)
63 2uzz_A N-methyl-L-tryptophan o 96.1 0.016 5.4E-07 49.6 7.7 55 48-112 150-204 (372)
64 2wpf_A Trypanothione reductase 96.1 0.012 4.2E-07 53.1 7.2 57 46-110 234-290 (495)
65 2gf3_A MSOX, monomeric sarcosi 96.0 0.017 5.7E-07 49.7 7.7 55 48-112 151-205 (389)
66 3oc4_A Oxidoreductase, pyridin 96.0 0.016 5.5E-07 51.5 7.8 57 45-111 187-243 (452)
67 1m6i_A Programmed cell death p 96.0 0.013 4.6E-07 52.8 7.3 56 46-110 225-280 (493)
68 1mo9_A ORF3; nucleotide bindin 96.0 0.014 4.9E-07 53.0 7.4 57 47-110 255-314 (523)
69 2bs2_A Quinol-fumarate reducta 96.0 0.019 6.7E-07 53.9 8.4 58 48-110 159-218 (660)
70 2qcu_A Aerobic glycerol-3-phos 96.0 0.018 6.3E-07 51.9 7.9 59 48-112 150-210 (501)
71 2v3a_A Rubredoxin reductase; a 96.0 0.015 5.1E-07 50.5 7.0 56 46-110 186-241 (384)
72 1fec_A Trypanothione reductase 96.0 0.014 4.8E-07 52.6 7.1 57 46-110 230-286 (490)
73 3o0h_A Glutathione reductase; 95.9 0.015 5.2E-07 52.2 7.2 56 46-110 231-286 (484)
74 2hqm_A GR, grase, glutathione 95.9 0.014 4.9E-07 52.3 6.9 58 46-110 225-283 (479)
75 2oln_A NIKD protein; flavoprot 95.9 0.019 6.6E-07 49.7 7.4 54 48-111 154-207 (397)
76 2ywl_A Thioredoxin reductase r 95.9 0.016 5.4E-07 44.5 6.1 54 47-111 56-109 (180)
77 3itj_A Thioredoxin reductase 1 95.8 0.021 7.2E-07 47.8 7.2 57 50-111 211-270 (338)
78 1xdi_A RV3303C-LPDA; reductase 95.8 0.022 7.7E-07 51.3 7.7 57 46-111 222-278 (499)
79 3e1t_A Halogenase; flavoprotei 95.8 0.026 8.8E-07 51.1 8.1 64 48-117 112-178 (512)
80 4dna_A Probable glutathione re 95.8 0.016 5.6E-07 51.6 6.6 56 46-110 210-266 (463)
81 2h88_A Succinate dehydrogenase 95.7 0.021 7.2E-07 53.3 7.4 58 48-110 156-215 (621)
82 3cty_A Thioredoxin reductase; 95.7 0.025 8.5E-07 47.4 7.3 57 50-111 193-251 (319)
83 2e4g_A Tryptophan halogenase; 95.7 0.024 8.3E-07 51.8 7.5 57 48-112 195-252 (550)
84 2weu_A Tryptophan 5-halogenase 95.7 0.031 1.1E-06 50.3 8.1 57 48-112 174-230 (511)
85 3v76_A Flavoprotein; structura 95.7 0.022 7.6E-07 50.4 7.0 56 47-112 132-187 (417)
86 1ges_A Glutathione reductase; 95.5 0.024 8.3E-07 50.4 6.9 57 46-110 207-263 (450)
87 2gmh_A Electron transfer flavo 95.5 0.04 1.4E-06 50.9 8.5 61 48-112 145-217 (584)
88 2bc0_A NADH oxidase; flavoprot 95.5 0.025 8.5E-07 50.9 6.9 55 46-110 235-289 (490)
89 3r9u_A Thioredoxin reductase; 95.5 0.036 1.2E-06 45.9 7.4 55 51-111 187-243 (315)
90 3nix_A Flavoprotein/dehydrogen 95.5 0.027 9.3E-07 49.0 6.8 64 48-118 107-173 (421)
91 2x3n_A Probable FAD-dependent 95.4 0.024 8.1E-07 49.2 6.2 63 48-118 108-173 (399)
92 3cgb_A Pyridine nucleotide-dis 95.4 0.05 1.7E-06 48.7 8.4 56 46-111 226-281 (480)
93 2gqf_A Hypothetical protein HI 95.4 0.048 1.6E-06 47.9 8.1 57 46-112 108-168 (401)
94 1kf6_A Fumarate reductase flav 95.4 0.037 1.3E-06 51.4 7.6 59 48-111 135-196 (602)
95 1zk7_A HGII, reductase, mercur 95.4 0.043 1.5E-06 48.9 7.8 55 46-110 215-269 (467)
96 2zbw_A Thioredoxin reductase; 95.3 0.069 2.3E-06 44.8 8.6 58 48-111 192-251 (335)
97 1onf_A GR, grase, glutathione 95.3 0.038 1.3E-06 49.8 7.3 57 46-110 216-273 (500)
98 1fl2_A Alkyl hydroperoxide red 95.2 0.054 1.8E-06 44.9 7.7 55 51-110 183-240 (310)
99 3ab1_A Ferredoxin--NADP reduct 95.2 0.042 1.4E-06 46.9 7.1 58 48-111 203-262 (360)
100 1nhp_A NADH peroxidase; oxidor 95.2 0.036 1.2E-06 49.1 6.8 54 47-110 191-244 (447)
101 2yqu_A 2-oxoglutarate dehydrog 95.2 0.036 1.2E-06 49.2 6.8 56 47-111 208-263 (455)
102 2r9z_A Glutathione amide reduc 95.2 0.05 1.7E-06 48.6 7.6 56 46-110 206-262 (463)
103 3h8l_A NADH oxidase; membrane 95.1 0.029 9.8E-07 49.0 5.8 52 46-110 217-268 (409)
104 2gqw_A Ferredoxin reductase; f 95.1 0.046 1.6E-06 47.9 7.1 51 47-110 187-237 (408)
105 3ics_A Coenzyme A-disulfide re 95.1 0.045 1.5E-06 50.3 7.3 53 47-110 228-280 (588)
106 3lad_A Dihydrolipoamide dehydr 95.0 0.075 2.6E-06 47.3 8.4 59 46-111 220-279 (476)
107 2aqj_A Tryptophan halogenase, 95.0 0.058 2E-06 49.0 7.7 57 48-112 166-222 (538)
108 1zmd_A Dihydrolipoyl dehydroge 95.0 0.078 2.7E-06 47.3 8.3 60 46-110 219-280 (474)
109 1rp0_A ARA6, thiazole biosynth 94.9 0.073 2.5E-06 44.2 7.5 58 48-110 120-189 (284)
110 1k0i_A P-hydroxybenzoate hydro 94.8 0.087 3E-06 45.4 8.0 64 48-118 104-170 (394)
111 3i3l_A Alkylhalidase CMLS; fla 94.7 0.089 3E-06 48.7 8.1 62 48-116 129-193 (591)
112 1ojt_A Surface protein; redox- 94.6 0.048 1.6E-06 48.9 5.9 59 46-110 225-284 (482)
113 3c4n_A Uncharacterized protein 94.6 0.025 8.6E-07 49.4 3.9 54 48-111 173-235 (405)
114 1ebd_A E3BD, dihydrolipoamide 94.5 0.087 3E-06 46.7 7.5 60 46-111 210-269 (455)
115 2pyx_A Tryptophan halogenase; 94.5 0.1 3.6E-06 47.2 8.1 63 48-118 176-241 (526)
116 1v59_A Dihydrolipoamide dehydr 94.5 0.095 3.2E-06 46.7 7.6 58 47-110 224-285 (478)
117 3f8d_A Thioredoxin reductase ( 94.4 0.14 4.9E-06 42.2 8.2 53 52-110 194-249 (323)
118 3urh_A Dihydrolipoyl dehydroge 94.4 0.13 4.6E-06 46.0 8.5 59 46-110 238-298 (491)
119 1n4w_A CHOD, cholesterol oxida 94.4 0.058 2E-06 48.8 6.1 58 50-111 224-287 (504)
120 4g6h_A Rotenone-insensitive NA 94.4 0.071 2.4E-06 48.3 6.7 57 45-110 270-330 (502)
121 2zxi_A TRNA uridine 5-carboxym 94.3 0.077 2.6E-06 49.6 6.8 55 48-111 124-179 (637)
122 2q0l_A TRXR, thioredoxin reduc 94.3 0.17 5.7E-06 41.9 8.3 56 51-111 182-240 (311)
123 1y56_A Hypothetical protein PH 94.2 0.051 1.8E-06 49.0 5.3 60 37-110 252-311 (493)
124 2a8x_A Dihydrolipoyl dehydroge 94.2 0.12 4.1E-06 45.9 7.6 57 46-110 211-269 (464)
125 2q7v_A Thioredoxin reductase; 94.1 0.17 5.9E-06 42.2 8.2 54 51-110 191-247 (325)
126 1dxl_A Dihydrolipoamide dehydr 94.1 0.13 4.4E-06 45.7 7.7 60 46-111 217-278 (470)
127 3lzw_A Ferredoxin--NADP reduct 94.1 0.09 3.1E-06 43.8 6.2 55 51-111 193-249 (332)
128 3dk9_A Grase, GR, glutathione 94.1 0.19 6.4E-06 44.8 8.6 61 46-110 227-291 (478)
129 2qae_A Lipoamide, dihydrolipoy 94.0 0.14 4.7E-06 45.6 7.7 58 46-110 214-274 (468)
130 3dgh_A TRXR-1, thioredoxin red 94.0 0.1 3.5E-06 46.6 6.9 59 47-110 227-287 (483)
131 1coy_A Cholesterol oxidase; ox 94.0 0.082 2.8E-06 47.9 6.2 57 51-111 230-292 (507)
132 3ntd_A FAD-dependent pyridine 93.9 0.13 4.5E-06 46.7 7.4 56 47-110 192-265 (565)
133 2eq6_A Pyruvate dehydrogenase 93.9 0.18 6E-06 44.9 8.0 56 47-110 210-269 (464)
134 4a9w_A Monooxygenase; baeyer-v 93.8 0.11 3.8E-06 43.5 6.4 56 47-111 76-131 (357)
135 3alj_A 2-methyl-3-hydroxypyrid 93.8 0.13 4.5E-06 44.1 7.0 58 48-117 108-166 (379)
136 2e5v_A L-aspartate oxidase; ar 93.8 0.1 3.5E-06 46.7 6.5 56 48-111 120-175 (472)
137 3oz2_A Digeranylgeranylglycero 93.8 0.15 5E-06 43.4 7.2 64 48-116 103-167 (397)
138 4eqs_A Coenzyme A disulfide re 93.8 0.13 4.3E-06 45.6 6.9 51 47-110 188-238 (437)
139 3dgz_A Thioredoxin reductase 2 93.7 0.21 7.3E-06 44.6 8.4 59 47-110 225-285 (488)
140 3ces_A MNMG, tRNA uridine 5-ca 93.7 0.096 3.3E-06 49.1 6.2 55 48-111 125-180 (651)
141 3h28_A Sulfide-quinone reducta 93.6 0.1 3.4E-06 45.9 5.9 52 49-110 202-254 (430)
142 3ihg_A RDME; flavoenzyme, anth 93.5 0.19 6.6E-06 45.4 7.7 67 48-118 121-190 (535)
143 1chu_A Protein (L-aspartate ox 93.4 0.11 3.9E-06 47.4 6.1 62 48-111 139-207 (540)
144 2e1m_B L-glutamate oxidase; L- 93.4 0.095 3.2E-06 38.9 4.5 53 96-150 3-57 (130)
145 2qa1_A PGAE, polyketide oxygen 93.3 0.23 7.9E-06 44.8 7.9 64 48-118 107-172 (500)
146 2qa2_A CABE, polyketide oxygen 93.2 0.26 8.9E-06 44.4 8.1 62 48-118 108-173 (499)
147 3k30_A Histamine dehydrogenase 93.1 0.13 4.6E-06 48.2 6.1 55 48-110 568-622 (690)
148 1vdc_A NTR, NADPH dependent th 93.0 0.33 1.1E-05 40.5 8.0 58 51-111 198-258 (333)
149 1jnr_A Adenylylsulfate reducta 93.0 0.25 8.6E-06 46.0 7.8 61 48-110 152-216 (643)
150 3hyw_A Sulfide-quinone reducta 92.8 0.18 6.1E-06 44.4 6.3 53 48-110 201-254 (430)
151 1xhc_A NADH oxidase /nitrite r 92.6 0.13 4.3E-06 44.5 4.9 51 46-110 182-232 (367)
152 1kdg_A CDH, cellobiose dehydro 92.5 0.16 5.6E-06 46.1 5.7 55 52-111 200-260 (546)
153 2a87_A TRXR, TR, thioredoxin r 92.5 0.18 6.2E-06 42.4 5.7 51 55-111 199-251 (335)
154 3gyx_A Adenylylsulfate reducta 92.4 0.22 7.7E-06 46.7 6.6 61 48-110 167-231 (662)
155 1hyu_A AHPF, alkyl hydroperoxi 92.3 0.38 1.3E-05 43.5 7.8 55 51-110 394-451 (521)
156 3ab1_A Ferredoxin--NADP reduct 92.1 0.28 9.6E-06 41.6 6.4 56 47-110 74-129 (360)
157 3d1c_A Flavin-containing putat 92.0 0.35 1.2E-05 40.9 7.0 54 48-111 89-142 (369)
158 1fl2_A Alkyl hydroperoxide red 92.0 0.3 1E-05 40.3 6.4 57 48-110 57-113 (310)
159 2bry_A NEDD9 interacting prote 92.0 0.2 6.7E-06 45.2 5.6 62 48-112 167-230 (497)
160 3gwf_A Cyclohexanone monooxyge 91.9 0.25 8.5E-06 45.1 6.2 56 48-110 88-145 (540)
161 4ap3_A Steroid monooxygenase; 91.9 0.26 8.9E-06 45.1 6.3 56 48-110 100-157 (549)
162 3fmw_A Oxygenase; mithramycin, 91.9 0.13 4.4E-06 47.3 4.3 64 48-118 149-214 (570)
163 3lzw_A Ferredoxin--NADP reduct 91.7 0.23 7.8E-06 41.2 5.3 55 47-110 67-121 (332)
164 3klj_A NAD(FAD)-dependent dehy 91.7 0.3 1E-05 42.5 6.2 51 49-110 64-114 (385)
165 3cp8_A TRNA uridine 5-carboxym 91.5 0.27 9.2E-06 46.0 6.0 55 48-111 118-173 (641)
166 3kd9_A Coenzyme A disulfide re 91.5 0.32 1.1E-05 42.9 6.4 55 45-110 188-242 (449)
167 3s5w_A L-ornithine 5-monooxyge 91.5 0.68 2.3E-05 40.7 8.4 46 60-111 329-376 (463)
168 2xve_A Flavin-containing monoo 91.4 0.44 1.5E-05 42.4 7.1 59 48-110 102-164 (464)
169 4b1b_A TRXR, thioredoxin reduc 91.4 0.42 1.4E-05 43.7 7.1 55 47-110 263-317 (542)
170 3vrd_B FCCB subunit, flavocyto 91.3 0.059 2E-06 46.7 1.3 46 56-110 211-256 (401)
171 2vou_A 2,6-dihydroxypyridine h 91.3 0.43 1.5E-05 41.2 6.8 57 49-116 101-158 (397)
172 2zbw_A Thioredoxin reductase; 91.3 0.35 1.2E-05 40.3 6.1 54 48-110 66-119 (335)
173 3pl8_A Pyranose 2-oxidase; sub 91.2 0.26 8.9E-06 45.8 5.6 86 60-148 273-371 (623)
174 3fbs_A Oxidoreductase; structu 91.2 0.32 1.1E-05 39.6 5.7 50 48-110 175-224 (297)
175 1lvl_A Dihydrolipoamide dehydr 91.1 0.32 1.1E-05 43.2 5.8 53 47-110 212-266 (458)
176 3rp8_A Flavoprotein monooxygen 91.1 0.28 9.4E-06 42.5 5.4 59 48-117 128-187 (407)
177 3d1c_A Flavin-containing putat 90.9 0.33 1.1E-05 41.0 5.6 54 48-110 215-270 (369)
178 3sx6_A Sulfide-quinone reducta 90.3 0.44 1.5E-05 41.9 6.1 51 49-109 210-266 (437)
179 3ic9_A Dihydrolipoamide dehydr 90.1 1 3.6E-05 40.2 8.5 56 47-110 215-272 (492)
180 2jbv_A Choline oxidase; alcoho 90.1 0.27 9.3E-06 44.9 4.6 48 59-110 221-271 (546)
181 3itj_A Thioredoxin reductase 1 89.7 0.33 1.1E-05 40.3 4.5 57 47-110 84-140 (338)
182 3uox_A Otemo; baeyer-villiger 89.6 0.43 1.5E-05 43.5 5.6 56 48-110 88-145 (545)
183 3f8d_A Thioredoxin reductase ( 89.6 0.56 1.9E-05 38.5 5.8 55 47-111 70-124 (323)
184 2gv8_A Monooxygenase; FMO, FAD 89.3 0.69 2.4E-05 40.7 6.5 57 48-110 116-175 (447)
185 1hyu_A AHPF, alkyl hydroperoxi 89.3 0.64 2.2E-05 42.0 6.4 57 48-110 268-324 (521)
186 2q0l_A TRXR, thioredoxin reduc 89.3 0.74 2.5E-05 37.9 6.3 54 47-110 59-112 (311)
187 1vdc_A NTR, NADPH dependent th 88.6 0.9 3.1E-05 37.7 6.5 53 48-111 71-123 (333)
188 2dkh_A 3-hydroxybenzoate hydro 88.4 0.84 2.9E-05 42.4 6.6 69 48-118 142-218 (639)
189 3c96_A Flavin-containing monoo 88.4 0.95 3.3E-05 39.1 6.7 63 48-117 108-175 (410)
190 4fk1_A Putative thioredoxin re 88.4 0.57 1.9E-05 38.8 5.0 52 48-108 181-232 (304)
191 1w4x_A Phenylacetone monooxyge 87.9 0.86 3E-05 41.3 6.3 56 49-111 96-153 (542)
192 2q7v_A Thioredoxin reductase; 87.8 1 3.5E-05 37.3 6.3 55 47-110 65-121 (325)
193 1ps9_A 2,4-dienoyl-COA reducta 87.8 1.3 4.4E-05 41.3 7.6 52 48-111 574-627 (671)
194 2gag_A Heterotetrameric sarcos 87.6 0.83 2.8E-05 44.7 6.3 53 54-110 323-381 (965)
195 3qvp_A Glucose oxidase; oxidor 87.5 0.54 1.8E-05 43.4 4.7 50 58-110 238-291 (583)
196 2gjc_A Thiazole biosynthetic e 87.4 2.3 7.9E-05 36.2 8.3 64 48-111 147-238 (326)
197 2xdo_A TETX2 protein; tetracyc 87.2 0.52 1.8E-05 40.7 4.2 59 49-118 130-189 (398)
198 3qfa_A Thioredoxin reductase 1 87.2 2.3 7.7E-05 38.3 8.6 61 46-110 249-313 (519)
199 1trb_A Thioredoxin reductase; 87.2 1.2 4.2E-05 36.6 6.4 53 47-110 62-114 (320)
200 3s5w_A L-ornithine 5-monooxyge 87.0 0.96 3.3E-05 39.7 5.9 59 48-110 128-190 (463)
201 2vdc_G Glutamate synthase [NAD 86.7 0.47 1.6E-05 42.3 3.7 51 54-110 309-376 (456)
202 1lqt_A FPRA; NADP+ derivative, 86.1 0.63 2.2E-05 41.4 4.2 56 50-111 249-325 (456)
203 2a87_A TRXR, TR, thioredoxin r 85.9 1.2 4E-05 37.3 5.7 53 47-110 71-124 (335)
204 1cjc_A Protein (adrenodoxin re 85.6 1.3 4.4E-05 39.4 6.0 49 60-111 270-332 (460)
205 1gte_A Dihydropyrimidine dehyd 85.0 1.8 6E-05 42.6 7.1 55 51-110 374-440 (1025)
206 3jsk_A Cypbp37 protein; octame 84.9 3 0.0001 35.9 7.7 64 48-111 161-250 (344)
207 1q1r_A Putidaredoxin reductase 84.6 1.6 5.3E-05 38.3 6.1 46 54-110 67-112 (431)
208 3cty_A Thioredoxin reductase; 83.5 2.5 8.4E-05 34.9 6.5 52 48-110 73-124 (319)
209 1xhc_A NADH oxidase /nitrite r 82.1 1.8 6.3E-05 37.0 5.4 48 51-110 64-111 (367)
210 3q9t_A Choline dehydrogenase a 81.9 1.5 5E-05 40.4 4.9 48 59-110 218-268 (577)
211 3ef6_A Toluene 1,2-dioxygenase 81.9 1.9 6.6E-05 37.4 5.5 46 54-110 64-109 (410)
212 2x8g_A Thioredoxin glutathione 81.6 3.6 0.00012 37.6 7.4 61 46-110 325-393 (598)
213 4hb9_A Similarities with proba 81.4 1.4 4.9E-05 37.4 4.4 55 53-115 114-170 (412)
214 3fim_B ARYL-alcohol oxidase; A 81.0 1.2 4E-05 41.0 3.9 49 58-111 219-275 (566)
215 1o94_A Tmadh, trimethylamine d 80.7 2.5 8.5E-05 39.9 6.1 26 50-75 574-599 (729)
216 2r0c_A REBC; flavin adenine di 80.1 4.5 0.00015 36.6 7.5 61 48-117 139-202 (549)
217 3t37_A Probable dehydrogenase; 79.6 1.8 6.1E-05 38.7 4.6 53 59-116 223-275 (526)
218 3fbs_A Oxidoreductase; structu 79.4 2.9 0.0001 33.7 5.5 53 48-110 57-110 (297)
219 1ju2_A HydroxynitrIle lyase; f 78.9 2.4 8.3E-05 38.4 5.2 55 54-111 201-260 (536)
220 1gpe_A Protein (glucose oxidas 78.7 1.8 6.2E-05 39.8 4.3 51 58-110 242-295 (587)
221 3uox_A Otemo; baeyer-villiger 78.3 1.8 6.3E-05 39.3 4.3 49 51-113 342-392 (545)
222 3lxd_A FAD-dependent pyridine 77.8 3 0.0001 36.0 5.4 51 49-110 67-117 (415)
223 3hyw_A Sulfide-quinone reducta 77.3 0.72 2.5E-05 40.5 1.2 51 49-111 58-108 (430)
224 3oc4_A Oxidoreductase, pyridin 76.3 4.9 0.00017 35.2 6.3 50 53-110 64-113 (452)
225 4eqs_A Coenzyme A disulfide re 76.0 3.1 0.00011 36.5 5.0 51 54-110 64-114 (437)
226 3l8k_A Dihydrolipoyl dehydroge 74.9 4.1 0.00014 35.9 5.5 54 48-110 215-270 (466)
227 3ics_A Coenzyme A-disulfide re 74.7 5.3 0.00018 36.3 6.3 54 49-110 95-150 (588)
228 2v3a_A Rubredoxin reductase; a 74.2 7.1 0.00024 33.2 6.7 46 53-110 66-111 (384)
229 3sx6_A Sulfide-quinone reducta 74.0 4.4 0.00015 35.4 5.4 51 49-111 61-111 (437)
230 2gqw_A Ferredoxin reductase; f 73.2 2.5 8.7E-05 36.6 3.6 44 56-110 68-111 (408)
231 1nhp_A NADH peroxidase; oxidor 71.9 9.8 0.00034 33.1 7.2 53 50-110 59-113 (447)
232 2cdu_A NADPH oxidase; flavoenz 71.7 6.4 0.00022 34.4 5.9 52 51-110 62-115 (452)
233 3h8l_A NADH oxidase; membrane 71.3 5.4 0.00018 34.3 5.3 51 48-110 57-111 (409)
234 3ntd_A FAD-dependent pyridine 71.3 5.6 0.00019 35.8 5.6 54 49-110 60-115 (565)
235 3gwf_A Cyclohexanone monooxyge 71.2 2.4 8.2E-05 38.5 3.1 43 58-113 341-385 (540)
236 3fg2_P Putative rubredoxin red 70.0 8 0.00027 33.2 6.1 49 50-110 60-108 (404)
237 4fk1_A Putative thioredoxin re 68.4 7.8 0.00027 31.7 5.5 55 48-110 61-115 (304)
238 3r9u_A Thioredoxin reductase; 68.2 8.3 0.00028 31.2 5.6 55 47-110 62-116 (315)
239 3kd9_A Coenzyme A disulfide re 68.2 4.8 0.00016 35.2 4.3 44 56-110 68-112 (449)
240 3cgb_A Pyridine nucleotide-dis 67.5 7.7 0.00026 34.3 5.5 50 53-110 98-150 (480)
241 2bc0_A NADH oxidase; flavoprot 67.3 8.4 0.00029 34.1 5.8 51 52-110 97-147 (490)
242 3iwa_A FAD-dependent pyridine 66.5 9.6 0.00033 33.5 6.0 49 54-110 73-123 (472)
243 1m6i_A Programmed cell death p 66.3 4.2 0.00014 36.3 3.5 41 59-110 102-142 (493)
244 1pn0_A Phenol 2-monooxygenase; 65.8 13 0.00044 34.6 6.9 30 48-77 120-152 (665)
245 4a5l_A Thioredoxin reductase; 65.5 45 0.0015 26.7 9.6 56 50-110 191-248 (314)
246 4b63_A L-ornithine N5 monooxyg 62.3 15 0.0005 32.8 6.4 63 48-110 146-212 (501)
247 2e1m_A L-glutamate oxidase; L- 62.1 10 0.00034 32.8 5.1 37 38-78 312-348 (376)
248 4a5l_A Thioredoxin reductase; 60.7 12 0.00043 30.2 5.3 53 48-110 67-119 (314)
249 3vrd_B FCCB subunit, flavocyto 60.2 15 0.00052 31.1 5.9 44 56-111 64-107 (401)
250 4ap3_A Steroid monooxygenase; 58.6 6.4 0.00022 35.8 3.3 46 54-113 350-397 (549)
251 1ebd_A E3BD, dihydrolipoamide 58.1 16 0.00055 31.8 5.8 49 50-110 94-143 (455)
252 3g3e_A D-amino-acid oxidase; F 56.0 3.4 0.00012 34.6 1.0 44 48-112 143-186 (351)
253 3h28_A Sulfide-quinone reducta 55.0 7.1 0.00024 33.8 2.9 50 49-110 58-107 (430)
254 2a8x_A Dihydrolipoyl dehydroge 52.4 19 0.00066 31.4 5.3 48 51-110 95-144 (464)
255 1dxl_A Dihydrolipoamide dehydr 50.2 21 0.00071 31.2 5.2 48 51-110 100-149 (470)
256 1y56_A Hypothetical protein PH 49.9 17 0.0006 32.1 4.7 51 51-110 165-217 (493)
257 1v59_A Dihydrolipoamide dehydr 46.4 22 0.00076 31.1 4.8 49 51-111 100-156 (478)
258 4a9w_A Monooxygenase; baeyer-v 45.3 13 0.00045 30.4 3.0 39 59-111 246-284 (357)
259 1w4x_A Phenylacetone monooxyge 44.5 18 0.00063 32.4 4.0 47 52-112 343-391 (542)
260 1ojt_A Surface protein; redox- 43.3 29 0.00098 30.5 5.0 48 52-111 100-159 (482)
261 2qae_A Lipoamide, dihydrolipoy 42.4 29 0.00098 30.3 4.8 48 51-110 97-146 (468)
262 1lvl_A Dihydrolipoamide dehydr 39.3 71 0.0024 27.7 6.9 43 53-110 102-144 (458)
263 2eq6_A Pyruvate dehydrogenase 38.9 56 0.0019 28.4 6.2 43 53-110 99-141 (464)
264 4gcm_A TRXR, thioredoxin reduc 37.6 72 0.0024 25.6 6.3 52 48-110 63-114 (312)
265 1xdi_A RV3303C-LPDA; reductase 35.5 53 0.0018 28.9 5.5 54 51-110 99-154 (499)
266 3l8k_A Dihydrolipoyl dehydroge 34.7 35 0.0012 29.8 4.1 48 51-110 93-142 (466)
267 2gag_A Heterotetrameric sarcos 34.2 66 0.0023 31.2 6.3 57 48-110 182-251 (965)
268 2hqm_A GR, grase, glutathione 33.4 38 0.0013 29.7 4.2 48 51-110 109-158 (479)
269 2r9z_A Glutathione amide reduc 32.2 82 0.0028 27.4 6.2 44 52-110 97-140 (463)
270 2wpf_A Trypanothione reductase 31.5 66 0.0023 28.3 5.5 48 52-110 112-165 (495)
271 3c4a_A Probable tryptophan hyd 28.8 24 0.00083 29.7 2.0 50 48-117 99-148 (381)
272 1zmd_A Dihydrolipoyl dehydroge 28.6 77 0.0026 27.5 5.3 47 52-110 102-150 (474)
273 1ges_A Glutathione reductase; 27.6 97 0.0033 26.7 5.8 44 52-110 98-141 (450)
274 1zk7_A HGII, reductase, mercur 25.9 73 0.0025 27.6 4.7 44 55-110 102-148 (467)
275 2xve_A Flavin-containing monoo 25.3 43 0.0015 29.3 3.0 22 87-111 254-275 (464)
276 1c0p_A D-amino acid oxidase; a 25.2 27 0.00092 29.0 1.6 43 48-112 143-185 (363)
277 1mo9_A ORF3; nucleotide bindin 25.0 86 0.0029 27.8 5.0 39 58-110 146-184 (523)
278 1fec_A Trypanothione reductase 24.7 1.2E+02 0.004 26.6 5.8 48 52-110 108-161 (490)
279 3klj_A NAD(FAD)-dependent dehy 24.6 35 0.0012 29.1 2.2 29 45-73 186-214 (385)
280 2yqu_A 2-oxoglutarate dehydrog 24.4 63 0.0022 27.9 3.9 46 52-110 94-139 (455)
281 4id3_A DNA repair protein REV1 23.6 82 0.0028 20.3 3.6 17 50-66 23-39 (92)
282 3dk9_A Grase, GR, glutathione 23.4 1.2E+02 0.004 26.3 5.5 48 50-110 111-158 (478)
283 2gv8_A Monooxygenase; FMO, FAD 21.4 72 0.0025 27.4 3.7 35 66-111 256-291 (447)
284 4b63_A L-ornithine N5 monooxyg 20.3 41 0.0014 29.8 1.9 43 63-111 355-408 (501)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.80 E-value=2.3e-18 Score=153.19 Aligned_cols=198 Identities=14% Similarity=0.179 Sum_probs=148.3
Q ss_pred chHHHHHcCCCCCCcccHHHHHHHHHHHHhccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCC
Q 026885 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (231)
Q Consensus 2 w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~ 81 (231)
|+|++...++.+++++|+..++..+..+... ....+++|+.. .++++|++.++++|++|++|++|++|..++ +
T Consensus 155 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~---~~~~~~~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 227 (425)
T 3ka7_A 155 ADSFCGWALSLKSDEVPVEEVFEIIENMYRF---GGTGIPEGGCK-GIIDALETVISANGGKIHTGQEVSKILIEN---G 227 (425)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH---CSCEEETTSHH-HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T
T ss_pred HHHHHHHHhCCCcccchHHHHHHHHHHHHhc---CCccccCCCHH-HHHHHHHHHHHHcCCEEEECCceeEEEEEC---C
Confidence 5677777788999999999988888764321 13567888875 699999999999999999999999999987 5
Q ss_pred cceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCccc---CchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHH
Q 026885 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWR---EMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERS 158 (231)
Q Consensus 82 ~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~---~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~ 158 (231)
++++|++ +|+++.||.||+|+|++.+.+|++.... +..+.+.+.++++.+.++++|+++++..
T Consensus 228 --~~~gv~~----~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-------- 293 (425)
T 3ka7_A 228 --KAAGIIA----DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-------- 293 (425)
T ss_dssp --EEEEEEE----TTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--------
T ss_pred --EEEEEEE----CCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc--------
Confidence 7888876 6889999999999999999899975421 3456778888998899999999999754
Q ss_pred HHhhhhcCCCcceecCCCC-cceeecccCCCCcccccCCCceEEEEEeecCCCCCCCCHHHHHHHHHHHhhcc
Q 026885 159 RQLRRALGLDNLLYTPDAD-FSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~-~~~~~~~s~~~p~~~~~~~~~~~~~~~~s~~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
..+++++..+.. +..+...|.++|. .+|+| ++++.+++....+..+. .+|+++.++++|+++
T Consensus 294 -------~~~~~~~~~~~~~~~~~~~~s~~~p~-~ap~G-~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ 356 (425)
T 3ka7_A 294 -------GHTGVLLTPYTRRINGVNEVTQADPE-LAPPG-KHLTMCHQYVAPENVKN-LESEIEMGLEDLKEI 356 (425)
T ss_dssp -------CSSSEEECCSSSSEEEEECGGGTCGG-GSCTT-CEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHH
T ss_pred -------CcCEEEECCChhhcceEEeccCCCCC-cCCCC-CeEEEEEeccccccccc-hHHHHHHHHHHHHHh
Confidence 334555554432 3334445677884 67776 46666655433222222 245679999999875
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.70 E-value=8.1e-16 Score=137.03 Aligned_cols=193 Identities=12% Similarity=0.127 Sum_probs=142.4
Q ss_pred chHHHHHcCCCCCCcccHHHHHHHHHHHHhccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCC
Q 026885 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (231)
Q Consensus 2 w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~ 81 (231)
++|++....+.+++++|+..++..+...... ....+++|+.. .++++|++.++++|++|++|++|++|..++ +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 220 (421)
T 3nrn_A 148 LESFAGWADSVSLSDLTALELAKEIRAALRW---GGPGLIRGGCK-AVIDELERIIMENKGKILTRKEVVEINIEE---K 220 (421)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH---CSCEEETTCHH-HHHHHHHHHHHTTTCEEESSCCEEEEETTT---T
T ss_pred HHHHHHHhcCCCcccCCHHHHHHHHHHHhhc---CCcceecCCHH-HHHHHHHHHHHHCCCEEEcCCeEEEEEEEC---C
Confidence 5677777789999999999988887764321 13567888875 699999999999999999999999999876 4
Q ss_pred cceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHHHHh
Q 026885 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQL 161 (231)
Q Consensus 82 ~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l 161 (231)
++ | . .+|+++.||.||+|+|++.+.+|++....+..+.+.+.++++.+.+.+++.++++..
T Consensus 221 --~v--V-~---~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~----------- 281 (421)
T 3nrn_A 221 --KV--Y-T---RDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPR----------- 281 (421)
T ss_dssp --EE--E-E---TTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCS-----------
T ss_pred --EE--E-E---eCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcc-----------
Confidence 44 4 3 378899999999999999988999743223346677889998899999999998643
Q ss_pred hhhcCCCcceecCCCCcceeecccCCCCcccccCCCceEEEEEeecCCCCCCCCHHHHHHHHHHHhhcc
Q 026885 162 RRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~s~~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
..+++++.++..+..+...+.++|. .+|+| ++++.+...-. ..+.+|+++.++++|+++
T Consensus 282 ----~~~~~~~~~~~~~~~i~~~s~~~p~-~ap~G-~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~ 340 (421)
T 3nrn_A 282 ----IGNTIVFTPGLMINGFNEPSALDKS-LAREG-YTLIMAHMALK----NGNVKKAIEKGWEELLEI 340 (421)
T ss_dssp ----SCSSEEECTTSSSCEEECGGGTCGG-GSCTT-EEEEEEEEECT----TCCHHHHHHHHHHHHHHH
T ss_pred ----cCCeEEEcCCcceeeEeccCCCCCC-cCCCC-ceEEEEEEeec----cccHHHHHHHHHHHHHHH
Confidence 3356777765542223344567773 56665 45555443311 223456689999999875
No 3
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.63 E-value=5.3e-15 Score=134.35 Aligned_cols=169 Identities=17% Similarity=0.200 Sum_probs=101.7
Q ss_pred eeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh-hHhhh
Q 026885 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP-GIKRL 116 (231)
Q Consensus 38 ~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~-~~~~L 116 (231)
..+++|+.. .++++|++.++++||+|++|++|++|.+++ + ++++|++. +|+++.||.||+|++++ .+..|
T Consensus 213 ~~~p~GG~~-~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~---~--~~~gV~~~---~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 213 VWFPRGGTG-ALVQGMIKLFQDLGGEVVLNARVSHMETTG---N--KIEAVHLE---DGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp EEEETTHHH-HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TSCEEECSCEEECCC--------
T ss_pred eEEeCCCCc-chHHHHHHHHHHhCCceeeecceeEEEeeC---C--eEEEEEec---CCcEEEcCEEEECCCHHHHHHHh
Confidence 457899886 699999999999999999999999999997 6 89999985 89999999999999986 56678
Q ss_pred CCCcccCchHHHHhhCCC-CCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecC---------------CCCcce
Q 026885 117 LPSSWREMKFFNNIYALV-GVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTP---------------DADFSC 180 (231)
Q Consensus 117 l~~~~~~~~~~~~~~~l~-~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------~~~~~~ 180 (231)
+++.+....+.+++.+.+ ..+...+++.++++..... .+++.+.+ ....++
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~-------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
T 4dgk_A 284 LSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLA-------------HHTVCFGPRYRELIDEIFNHDGLAEDFSL 350 (501)
T ss_dssp -------------------CCEEEEEEEEESSCCTTSC-------------SEEEEEECC-------------CCCEEEE
T ss_pred ccccccchhhhhhhhccccCCceeEEEecccCCccccc-------------cceeccccchhhhccccccccccccCCce
Confidence 887654444445566666 4477888999998654211 01111111 112345
Q ss_pred eecc-cCCCCcccccCCCceEEEEEeecCCCCCCC----CHHHHHHHHHHHhhc
Q 026885 181 FADL-ALTSPEDYYREGQGSLLQCVLTPGDPYMPL----PNDEIIRRVAKQVGS 229 (231)
Q Consensus 181 ~~~~-s~~~p~~~~~~~~~~~~~~~~s~~~~~~~~----~~eel~~~~~~~L~~ 229 (231)
|.+. +.+||+ ++|+|+.++..++..|.....+. .++++.+++++.|.+
T Consensus 351 ~v~~~s~~dp~-~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~ 403 (501)
T 4dgk_A 351 YLHAPCVTDSS-LAPEGCGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQ 403 (501)
T ss_dssp EEECGGGTCGG-GSSTTCEEEEEEEEECCTTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCCCCC-cCCCCCceEEEEEecCccccccccHHHHHHHHHHHHHHHHHH
Confidence 5544 578884 78887544444444444333222 356777888877764
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.59 E-value=3e-14 Score=128.50 Aligned_cols=201 Identities=16% Similarity=0.176 Sum_probs=137.9
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhc---------------------------cccceeeeeCCCCcchhHHHH
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK---------------------------TEASLLRMLKGSPDVYLSGPI 53 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~---------------------------~~~~~~g~~~g~~~~~l~~~l 53 (231)
+|+|++.+..+.+++++|+.+++..+...... .....+.+++|++. .++++|
T Consensus 162 ~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l 240 (477)
T 3nks_A 162 AMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLE-MLPQAL 240 (477)
T ss_dssp THHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTT-HHHHHH
T ss_pred HHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHH-HHHHHH
Confidence 57899999999999999999987655432110 01224577888886 699999
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCC
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYAL 133 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l 133 (231)
++.+++.|++|++|++|++|..++ + +++.|.+ +++++.||+||+|+|++.+.+|++... .+..+.+.++
T Consensus 241 ~~~l~~~g~~i~~~~~V~~i~~~~---~--~~~~v~~----~~~~~~ad~vv~a~p~~~~~~ll~~~~--~~~~~~l~~~ 309 (477)
T 3nks_A 241 ETHLTSRGVSVLRGQPVCGLSLQA---E--GRWKVSL----RDSSLEADHVISAIPASVLSELLPAEA--APLARALSAI 309 (477)
T ss_dssp HHHHHHTTCEEECSCCCCEEEECG---G--GCEEEEC----SSCEEEESEEEECSCHHHHHHHSCGGG--HHHHHHHHTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEEcC---C--ceEEEEE----CCeEEEcCEEEECCCHHHHHHhccccC--HHHHHHHhcC
Confidence 999999999999999999999876 3 3345543 666899999999999999999998632 3455678889
Q ss_pred CCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCc----ceeecccCCCCcccc-cCCCceEEEEEeecC
Q 026885 134 VGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADF----SCFADLALTSPEDYY-REGQGSLLQCVLTPG 208 (231)
Q Consensus 134 ~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~s~~~p~~~~-~~~~~~~~~~~~s~~ 208 (231)
++.++.++++.|+++..... .+ .++..+.... ++|.... -|. .. ++ +..++.+++...
T Consensus 310 ~~~~~~~v~l~~~~~~~~~~------------~~-g~l~~~~~~~~~~~~~~~s~~--~~~-~~~~~-~~~~l~~~~gg~ 372 (477)
T 3nks_A 310 TAVSVAVVNLQYQGAHLPVQ------------GF-GHLVPSSEDPGVLGIVYDSVA--FPE-QDGSP-PGLRVTVMLGGS 372 (477)
T ss_dssp CEEEEEEEEEEETTCCCSSC------------SS-EEECCTTTCSSEEEEECHHHH--CGG-GSTTT-TCEEEEEEECHH
T ss_pred CCCcEEEEEEEECCCCCCCC------------Cc-eEEccCCCCCCceEEEEeccc--cCC-CCCCC-CceEEEEEECCc
Confidence 99999999999998653100 11 2222221111 1121111 121 11 12 246676666522
Q ss_pred ------CCCCCCCHHHHHHHHHHHhhcc
Q 026885 209 ------DPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 209 ------~~~~~~~~eel~~~~~~~L~~~ 230 (231)
+....+++||+++.++++|+++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 400 (477)
T 3nks_A 373 WLQTLEASGCVLSQELFQQRAQEAAATQ 400 (477)
T ss_dssp HHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHH
Confidence 2334679999999999999863
No 5
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.51 E-value=1.8e-13 Score=124.66 Aligned_cols=201 Identities=13% Similarity=0.136 Sum_probs=137.5
Q ss_pred CchHHHHHcCCCCCCcccHHH---------HHHHHHHHHhccc------cceeeeeC-CCCcchhHHHHHHHHHHCCcEE
Q 026885 1 MWDPVAYALGFIDCDNISARC---------MLTIFALFATKTE------ASLLRMLK-GSPDVYLSGPIRKYITDKGGRF 64 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~---------~~~~l~~~~~~~~------~~~~g~~~-g~~~~~l~~~l~~~l~~~Gg~i 64 (231)
|++|++-.....+++++|+.+ +..+++.+..... ...+.|+. |+++ .++++|++.+.+. +|
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~-~l~~~la~~l~~~--~i 231 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTG-IIYQAIKEKLPSE--KL 231 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTH-HHHHHHHHHSCGG--GE
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHH-HHHHHHHhhhhhC--eE
Confidence 678999999999999999976 2334443322111 22466764 7876 6899999988653 89
Q ss_pred EcC--ceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCc--ccCchHHHHhhCCCCCcEEE
Q 026885 65 HLR--WGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSS--WREMKFFNNIYALVGVPVVT 140 (231)
Q Consensus 65 ~~~--~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~--~~~~~~~~~~~~l~~~~i~~ 140 (231)
++| ++|++|..++ + +|++. +|+++.||+||+|+|++.+.++++.. ..+....+.+.++++.++..
T Consensus 232 ~~~~~~~V~~I~~~~---~-----~v~~~---~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~ 300 (484)
T 4dsg_A 232 TFNSGFQAIAIDADA---K-----TITFS---NGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNV 300 (484)
T ss_dssp EECGGGCEEEEETTT---T-----EEEET---TSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEE
T ss_pred EECCCceeEEEEecC---C-----EEEEC---CCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEE
Confidence 999 5699999876 3 35553 78889999999999999998888541 11223445678899999999
Q ss_pred EEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCcce--eecccCCCCcccccCCCceEEEEEeecCCCCCCCCHHH
Q 026885 141 VQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSC--FADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDE 218 (231)
Q Consensus 141 v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~s~~~p~~~~~~~~~~~~~~~~s~~~~~~~~~~ee 218 (231)
+++.|+++..+ .+ ...+|++.++....+ ...++..+|. .+|++ .+++.+.++.. ..+.+++||
T Consensus 301 v~l~~~~~~~~--------~~----~~~~~i~vp~~~~~~~ri~~~s~~~p~-~ap~g-~~~l~~e~~~~-~~~~~~d~~ 365 (484)
T 4dsg_A 301 IGIGVKGTPPP--------HL----KTACWLYFPEDTSPFYRATVFSNYSKY-NVPEG-HWSLMLEVSES-KYKPVNHST 365 (484)
T ss_dssp EEEEEESCCCG--------GG----TTCCEEECCSTTCSCSEEECGGGTCGG-GSCTT-EEEEEEEEEEB-TTBCCCTTS
T ss_pred EEEEEcCCCcc--------cC----CCCeEEEEEcCCCeEEEEEeecCCCcc-cCCCC-eEEEEEEEecC-cCCcCCHHH
Confidence 99999986431 01 124666666543322 3344555563 34544 34444444433 566789999
Q ss_pred HHHHHHHHhhcc
Q 026885 219 IIRRVAKQVGSV 230 (231)
Q Consensus 219 l~~~~~~~L~~~ 230 (231)
|++.+.++|.++
T Consensus 366 l~~~a~~~L~~~ 377 (484)
T 4dsg_A 366 LIEDCIVGCLAS 377 (484)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999875
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.50 E-value=2.2e-13 Score=122.12 Aligned_cols=201 Identities=15% Similarity=0.183 Sum_probs=132.5
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhc----------------------cccceeeeeCCCCcchhHHHHHHHHH
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK----------------------TEASLLRMLKGSPDVYLSGPIRKYIT 58 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~----------------------~~~~~~g~~~g~~~~~l~~~l~~~l~ 58 (231)
+|+|++.+....+++++|+..++..+..+... .....+..+++++. .+++.|++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~l~ 246 (470)
T 3i6d_A 168 LIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQ-TLVEEIEKQLK 246 (470)
T ss_dssp THHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCTH-HHHHHHHHTCC
T ss_pred hccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHH-HHHHHHHHhcC
Confidence 57899999999999999999876544211100 00224566778876 58888888775
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcE
Q 026885 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPV 138 (231)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i 138 (231)
+ ++|++|++|++|..++ + + +.|.+. +|+++.||+||+|+|++.+.++++.. +..+.+.++++.++
T Consensus 247 ~--~~i~~~~~V~~i~~~~---~--~-~~v~~~---~g~~~~ad~vi~a~p~~~~~~l~~~~----~~~~~~~~~~~~~~ 311 (470)
T 3i6d_A 247 L--TKVYKGTKVTKLSHSG---S--C-YSLELD---NGVTLDADSVIVTAPHKAAAGMLSEL----PAISHLKNMHSTSV 311 (470)
T ss_dssp S--EEEECSCCEEEEEECS---S--S-EEEEES---SSCEEEESEEEECSCHHHHHHHTTTS----TTHHHHHTCEEEEE
T ss_pred C--CEEEeCCceEEEEEcC---C--e-EEEEEC---CCCEEECCEEEECCCHHHHHHHcCCc----hhhHHHhcCCCCce
Confidence 5 8999999999999887 3 2 346553 78789999999999999999998753 23466788889999
Q ss_pred EEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCcceeec-c-cCCCCcccccCCCceEEEEEeec--CCCCCCC
Q 026885 139 VTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFAD-L-ALTSPEDYYREGQGSLLQCVLTP--GDPYMPL 214 (231)
Q Consensus 139 ~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-s~~~p~~~~~~~~~~~~~~~~s~--~~~~~~~ 214 (231)
..+++.|+++..... . ....++..++....++.. + +...+ ...|++ ..++..++.. ++.+..+
T Consensus 312 ~~v~l~~~~~~~~~~-------~----~~~g~l~~~~~~~~~~~~~~~s~~~~-~~~p~~-~~~l~~~~~~~~~~~~~~~ 378 (470)
T 3i6d_A 312 ANVALGFPEGSVQME-------H----EGTGFVISRNSDFAITACTWTNKKWP-HAAPEG-KTLLRAYVGKAGDESIVDL 378 (470)
T ss_dssp EEEEEEESSTTCCCS-------S----CSSEEEECSTTCCSEEEEEEHHHHCG-GGSCTT-CEEEEEEECCSSCCGGGTS
T ss_pred EEEEEEECchhcCCC-------C----CCeEEEccCCCCCCceEEEEEcCcCC-CcCCCC-CEEEEEEECCCCCccccCC
Confidence 999999999764100 0 011233332322222111 1 11112 123333 4566665542 2346688
Q ss_pred CHHHHHHHHHHHhhcc
Q 026885 215 PNDEIIRRVAKQVGSV 230 (231)
Q Consensus 215 ~~eel~~~~~~~L~~~ 230 (231)
+++|+++.++++|+++
T Consensus 379 ~~~~~~~~~~~~l~~~ 394 (470)
T 3i6d_A 379 SDNDIINIVLEDLKKV 394 (470)
T ss_dssp CHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999986
No 7
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.49 E-value=7.8e-14 Score=126.63 Aligned_cols=201 Identities=11% Similarity=0.145 Sum_probs=131.8
Q ss_pred CchHHHHHcCCCCCCcccHHHHHH---------HHHH-HHhccc-----cce-eeeeCCCCcchhHHHHHHHHHHCCcEE
Q 026885 1 MWDPVAYALGFIDCDNISARCMLT---------IFAL-FATKTE-----ASL-LRMLKGSPDVYLSGPIRKYITDKGGRF 64 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~---------~l~~-~~~~~~-----~~~-~g~~~g~~~~~l~~~l~~~l~~~Gg~i 64 (231)
+++|++......+++++|+.++.. .+.. +..... ... ...++||+. .++++|++.|++.|++|
T Consensus 161 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~i 239 (513)
T 4gde_A 161 FMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTG-GIWIAVANTLPKEKTRF 239 (513)
T ss_dssp THHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHH-HHHHHHHHTSCGGGEEE
T ss_pred hcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHH-HHHHHHHHHHHhcCeee
Confidence 467888888888999999876532 1221 111111 112 333478876 69999999999999999
Q ss_pred EcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEE
Q 026885 65 HLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLR 144 (231)
Q Consensus 65 ~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~ 144 (231)
++|++|++|..++ + .+++. +|+++.||+||+|+|++.+.++++.. +.......+++.++.+|.|.
T Consensus 240 ~~~~~V~~I~~~~---~-----~v~~~---~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~~~v~l~ 304 (513)
T 4gde_A 240 GEKGKVTKVNANN---K-----TVTLQ---DGTTIGYKKLVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSSTHVIGVG 304 (513)
T ss_dssp SGGGCEEEEETTT---T-----EEEET---TSCEEEEEEEEECSCHHHHHHHTTCH----HHHHHHTTCCEEEEEEEEEE
T ss_pred ecceEEEEEEccC---C-----EEEEc---CCCEEECCEEEECCCHHHHHHhcCch----hhHhhhhcccCCceEEEEEE
Confidence 9999999999886 4 24453 89999999999999999999988753 23345678899999999999
Q ss_pred ecCccchhhhhHHHHHhhhhcCCCcceecCCCCccee--ecccCCCCcccccCCC---------------------ceEE
Q 026885 145 YNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCF--ADLALTSPEDYYREGQ---------------------GSLL 201 (231)
Q Consensus 145 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~s~~~p~~~~~~~~---------------------~~~~ 201 (231)
++++.... . ...+|++.+++...+. ..+++.+|. ..|.+. ..+.
T Consensus 305 ~~~~~~~~--------~----~~~~~~y~~~~~~~f~Ri~~~~n~sp~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (513)
T 4gde_A 305 VRGSRPER--------I----GDKCWLYFPEDNCPFYRATIFSNYSPY-NQPEASAALPTMQLADGSRPQSTEAKEGPYW 371 (513)
T ss_dssp EESSCCTT--------T----TTCCEEECCSTTCSCSEEECGGGTCGG-GSCCTTCCEECCEETTSCCCSCCSEECCCEE
T ss_pred Eecccccc--------c----cccceeeccCCCCceeEEEecCCCCcc-cCCCCCceEEEEEeccCCCcccccCCcceEE
Confidence 98753210 0 1235555554433321 111222221 111111 1122
Q ss_pred EEEee-cCCCCCCCCHHHHHHHHHHHhhcc
Q 026885 202 QCVLT-PGDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 202 ~~~~s-~~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
..+.. ..+++..+++|||++.++++|.++
T Consensus 372 ~~~~~~~~~~~~~~~de~l~~~~~~~L~~~ 401 (513)
T 4gde_A 372 SIMLEVSESSMKPVNQETILADCIQGLVNT 401 (513)
T ss_dssp EEEEEEEEBTTBCCCTTTHHHHHHHHHHHT
T ss_pred EEEecccchhccCCCHHHHHHHHHHHHHHh
Confidence 22222 335788999999999999999875
No 8
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.47 E-value=5.3e-13 Score=122.14 Aligned_cols=199 Identities=13% Similarity=0.034 Sum_probs=128.4
Q ss_pred chHHHHHcCCCCCCcccHHHHHHHHHHH------HhccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEe
Q 026885 2 WDPVAYALGFIDCDNISARCMLTIFALF------ATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (231)
Q Consensus 2 w~pl~~a~~~~~~~~~Sa~~~~~~l~~~------~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (231)
|+|++....+.+++++|+.+++..++.. .....+....++.|+.+ .++++|++.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (520)
T 1s3e_A 165 ATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSG-QVSERIMDLL---GDRVKLERPVIYIDQ 240 (520)
T ss_dssp HHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTH-HHHHHHHHHH---GGGEESSCCEEEEEC
T ss_pred HHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHH-HHHHHHHHHc---CCcEEcCCeeEEEEE
Confidence 5677777888999999999987655421 11112334567888886 6888888765 899999999999998
Q ss_pred ccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCccchhhhh
Q 026885 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (231)
Q Consensus 76 ~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~ 155 (231)
++ + ++. |.+ .+|+++.||+||+|+|+..+.+++.....+....+.+.++.+.++..+++.|++++..-
T Consensus 241 ~~---~--~v~-v~~---~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~--- 308 (520)
T 1s3e_A 241 TR---E--NVL-VET---LNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRK--- 308 (520)
T ss_dssp SS---S--SEE-EEE---TTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGG---
T ss_pred CC---C--eEE-EEE---CCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccC---
Confidence 76 3 444 655 37888999999999999988887632112223445678888889999999999875310
Q ss_pred HHHHHhhhhcCCCcceecCCCCcceeecccCCCCcccccCCCceEEEEEee--cCCCCCCCCHHHHHHHHHHHhhcc
Q 026885 156 ERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~s--~~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
. .+...++..+...++...+... .++++..++..++. +++.+.++++||+++.++++|+++
T Consensus 309 -----~----~~~g~~~~~~~~~~~~~~~d~~-----~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~ 371 (520)
T 1s3e_A 309 -----K----DYCGTMIIDGEEAPVAYTLDDT-----KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKV 371 (520)
T ss_dssp -----G----TEEEEEEECSTTCSCSEEEECC-----CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred -----C----CCCceeeccCCCCceEEEeeCC-----CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHH
Confidence 0 1112222111111111111111 11122234434443 234677889999999999999864
No 9
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.46 E-value=1.6e-12 Score=117.20 Aligned_cols=201 Identities=13% Similarity=0.173 Sum_probs=131.2
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHh----------------------cccc----ceeeeeCCCCcchhHHHHH
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT----------------------KTEA----SLLRMLKGSPDVYLSGPIR 54 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~----------------------~~~~----~~~g~~~g~~~~~l~~~l~ 54 (231)
+|.|++....+.+++++|+.+++..+..+.. ...+ ....+++|+.. .++++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~ 245 (478)
T 2ivd_A 167 LLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQ-VLIDALA 245 (478)
T ss_dssp THHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTH-HHHHHHH
T ss_pred HHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHH-HHHHHHH
Confidence 4678888888999999999887655443211 0112 45677888886 6899998
Q ss_pred HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCC
Q 026885 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALV 134 (231)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~ 134 (231)
+.+ |++|++|++|++|..++ + + +.|++....+|+++.||.||+|+|+..+.+|+|.. +....+.+.+++
T Consensus 246 ~~l---g~~i~~~~~V~~i~~~~---~--~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~~~~l~~~~ 314 (478)
T 2ivd_A 246 ASL---GDAAHVGARVEGLARED---G--G-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDALAALVAGIA 314 (478)
T ss_dssp HHH---GGGEESSEEEEEEECC-------C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHHHHHHHTCC
T ss_pred HHh---hhhEEcCCEEEEEEecC---C--e-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHHHHHHhcCC
Confidence 887 78999999999999876 3 3 45655211267789999999999999988888752 233456678899
Q ss_pred CCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcc--eecC---CCCcceeecccCCCCcccccCCCceEEEEEeecC-
Q 026885 135 GVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNL--LYTP---DADFSCFADLALTSPEDYYREGQGSLLQCVLTPG- 208 (231)
Q Consensus 135 ~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~--~~~~---~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~s~~- 208 (231)
+.++..++|.|+++..+. + +.+ +... .+...+... +...|. ..|.+ ..++.+++...
T Consensus 315 ~~~~~~v~l~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~-s~~~~~-~~p~g-~~~l~~~~~~~~ 377 (478)
T 2ivd_A 315 YAPIAVVHLGFDAGTLPA-------------P-DGFGFLVPAEEQRRMLGAIHA-STTFPF-RAEGG-RVLYSCMVGGAR 377 (478)
T ss_dssp BCCEEEEEEEECTTSSCC-------------C-CSSEEECCGGGCCSCCEEEEH-HHHCGG-GBSTT-CEEEEEEEECTT
T ss_pred CCcEEEEEEEEccccCCC-------------C-CceEEEecCCCCCceEEEEEE-cccCCC-cCCCC-CEEEEEEeCCcC
Confidence 889999999999865310 0 111 1110 111111111 111221 22333 35666665532
Q ss_pred -CCCCCCCHHHHHHHHHHHhhcc
Q 026885 209 -DPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 209 -~~~~~~~~eel~~~~~~~L~~~ 230 (231)
+.+.+++++++++.++++|+++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~~~ 400 (478)
T 2ivd_A 378 QPGLVEQDEDALAALAREELKAL 400 (478)
T ss_dssp CGGGGGSCHHHHHHHHHHHHHHH
T ss_pred CccccCCCHHHHHHHHHHHHHHH
Confidence 3456789999999999999874
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.45 E-value=3.3e-13 Score=121.83 Aligned_cols=195 Identities=13% Similarity=0.135 Sum_probs=132.3
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHh-----------cc--------------ccceeeeeCCCCcchhHHHHHH
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-----------KT--------------EASLLRMLKGSPDVYLSGPIRK 55 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~-----------~~--------------~~~~~g~~~g~~~~~l~~~l~~ 55 (231)
||+|++.+.++.+++++|+.+++..+..+.. .. .+..+.+++|++. .++++|++
T Consensus 166 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~l~~~l~~ 244 (475)
T 3lov_A 166 LIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLE-SLIERLEE 244 (475)
T ss_dssp THHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHH-HHHHHHHH
T ss_pred HHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHH-HHHHHHHh
Confidence 6899999999999999999876655532211 00 1235677888886 58888888
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCC
Q 026885 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVG 135 (231)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~ 135 (231)
.+.+ ++|++|++|++|..++ + + +.|++ .+| ++.||+||+|+|++.+.+|++... . +.+.++++
T Consensus 245 ~l~~--~~i~~~~~V~~i~~~~---~--~-~~v~~---~~g-~~~ad~vV~a~p~~~~~~ll~~~~----~-~~~~~~~~ 307 (475)
T 3lov_A 245 VLER--SEIRLETPLLAISRED---G--R-YRLKT---DHG-PEYADYVLLTIPHPQVVQLLPDAH----L-PELEQLTT 307 (475)
T ss_dssp HCSS--CEEESSCCCCEEEEET---T--E-EEEEC---TTC-CEEESEEEECSCHHHHHHHCTTSC----C-HHHHTCCE
T ss_pred hccC--CEEEcCCeeeEEEEeC---C--E-EEEEE---CCC-eEECCEEEECCCHHHHHHHcCccC----H-HHHhcCCC
Confidence 8765 8999999999999886 3 3 33544 366 789999999999999999987642 1 56788889
Q ss_pred CcEEEEEEEecCccchhhhhHHHHHhhhhcCCC--cceecCCCCcceeec-c-cCCCCcccccCCCceEEEEEee--cCC
Q 026885 136 VPVVTVQLRYNGWVTELQDLERSRQLRRALGLD--NLLYTPDADFSCFAD-L-ALTSPEDYYREGQGSLLQCVLT--PGD 209 (231)
Q Consensus 136 ~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~-s~~~p~~~~~~~~~~~~~~~~s--~~~ 209 (231)
.++.++++.|+++.. . +.+ .++..+.....+... + +...|. ..| + ..++..++. .++
T Consensus 308 ~~~~~v~l~~~~~~~-~-------------~~~g~g~l~~~~~~~~~~~~~~~s~~~~~-~~p-~-~~~l~~~~~~~~~~ 370 (475)
T 3lov_A 308 HSTATVTMIFDQQQS-L-------------PIEGTGFVVNRRAPYSITACTAIDQKWNH-SAP-D-HTVLRAFVGRPGND 370 (475)
T ss_dssp EEEEEEEEEEECCSS-C-------------SSSSSEEEECTTSSCSEEEEEEHHHHCTT-TCT-T-EEEEEEEECBTTBC
T ss_pred CeEEEEEEEECCcCC-C-------------CCCCEEEEecCCCCCceEEEEEEcccCCC-CCC-C-cEEEEEEeCCCCCC
Confidence 999999999998752 1 112 233333333222111 1 111111 122 2 345555553 224
Q ss_pred CCCCCCHHHHHHHHHHHhhcc
Q 026885 210 PYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 210 ~~~~~~~eel~~~~~~~L~~~ 230 (231)
.+..+++||+++.++++|+++
T Consensus 371 ~~~~~~~e~~~~~~~~~L~~~ 391 (475)
T 3lov_A 371 HLVHESDEVLQQAVLQDLEKI 391 (475)
T ss_dssp GGGGSCHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHH
Confidence 567889999999999999875
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.35 E-value=9.2e-12 Score=112.94 Aligned_cols=139 Identities=9% Similarity=0.003 Sum_probs=102.7
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhc----cccceeeeeCCCCcchhHHHHHHHHHHCC-cEEEcCceeeEEEe
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK----TEASLLRMLKGSPDVYLSGPIRKYITDKG-GRFHLRWGCREILY 75 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~----~~~~~~g~~~g~~~~~l~~~l~~~l~~~G-g~i~~~~~V~~i~~ 75 (231)
+|+|++....+.+++++|+..++..+...... ........++|+.. .++++|.+.+++.| ++|++|++|++|..
T Consensus 206 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~~i~~~~~V~~i~~ 284 (495)
T 2vvm_A 206 SLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQS-AFARRFWEEAAGTGRLGYVFGCPVRSVVN 284 (495)
T ss_dssp HHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHH-HHHHHHHHHHHTTTCEEEESSCCEEEEEE
T ss_pred HHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHH-HHHHHHHHHhhhcCceEEEeCCEEEEEEE
Confidence 46788888888999999999977655432110 00122345778876 69999999999999 99999999999998
Q ss_pred ccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCcc
Q 026885 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (231)
Q Consensus 76 ~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~ 149 (231)
++ + + ..|.+ .+|+.+.||+||+|+|+..+.+++-....+....+.+..+.+.++..++|.|+++.
T Consensus 285 ~~---~--~-v~v~~---~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 285 ER---D--A-ARVTA---RDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp CS---S--S-EEEEE---TTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred cC---C--E-EEEEE---CCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 76 3 2 34555 37778999999999999998887411112223445677888889999999999865
No 12
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.34 E-value=3.3e-12 Score=114.44 Aligned_cols=196 Identities=13% Similarity=0.033 Sum_probs=123.3
Q ss_pred chHHHHHcCCCCCC-cccHHHHHHHHHHHHh-----ccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEe
Q 026885 2 WDPVAYALGFIDCD-NISARCMLTIFALFAT-----KTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (231)
Q Consensus 2 w~pl~~a~~~~~~~-~~Sa~~~~~~l~~~~~-----~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (231)
|+|++....+.+++ ++|+.+++..+..... ...+....+++|+.. .+++.|++.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (453)
T 2yg5_A 165 IGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQ-QVSIRMAEAL---GDDVFLNAPVRTVKW 240 (453)
T ss_dssp HHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTH-HHHHHHHHHH---GGGEECSCCEEEEEE
T ss_pred HHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChH-HHHHHHHHhc---CCcEEcCCceEEEEE
Confidence 55666566778899 9999997765543210 001123456888886 6888888765 899999999999998
Q ss_pred ccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCccchhhhh
Q 026885 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (231)
Q Consensus 76 ~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~ 155 (231)
++ + +.+.|.+ +|+++.||+||+|+|+..+.+++.....+....+.+.++.+.+++.+++.|++++..-
T Consensus 241 ~~---~--~~v~v~~----~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~--- 308 (453)
T 2yg5_A 241 NE---S--GATVLAD----GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRE--- 308 (453)
T ss_dssp ET---T--EEEEEET----TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGG---
T ss_pred eC---C--ceEEEEE----CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCC---
Confidence 76 3 3123432 7888999999999999988887632222223345577777778999999999875310
Q ss_pred HHHHHhhhhcCCCcceecCCC-CcceeecccCCCCcccccCCCceEEEEEee--cCCCCCCCCHHHHHHHHHHHhhcc
Q 026885 156 ERSRQLRRALGLDNLLYTPDA-DFSCFADLALTSPEDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~s~~~p~~~~~~~~~~~~~~~~s--~~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
. .+...++..+. ...++. . +.| ++...++..++. .++.+..+++||+++.++++|+++
T Consensus 309 ---~------~~~g~~~~~~~~~~~~~~-~--~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 369 (453)
T 2yg5_A 309 ---D------GLSGTGFGASEVVQEVYD-N--TNH-----EDDRGTLVAFVSDEKADAMFELSAEERKATILASLARY 369 (453)
T ss_dssp ---G------TEEEEEECTTSSSCEEEE-C--CCT-----TCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred ---C------CCCceeecCCCCeEEEEe-C--CCC-----CCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 0 11112222222 111221 1 112 222234444443 224566778999999999999864
No 13
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.32 E-value=7.4e-12 Score=113.74 Aligned_cols=203 Identities=13% Similarity=0.071 Sum_probs=125.4
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHh---------------cc---------------ccceeeeeCCCCcchhH
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT---------------KT---------------EASLLRMLKGSPDVYLS 50 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~---------------~~---------------~~~~~g~~~g~~~~~l~ 50 (231)
||+|++.+..+.+++++|+.+++..+..+.. .. ......+++|++. .|+
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~-~l~ 246 (504)
T 1sez_A 168 LIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQ-TLT 246 (504)
T ss_dssp THHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTH-HHH
T ss_pred HHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHH-HHH
Confidence 5789988888999999999876543332111 00 0113567788886 688
Q ss_pred HHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcce----EEEEEEEecCCC---eEEecCEEEEcCChhhHhhhCCC---
Q 026885 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETY----VKGLAMSKATDK---KVVQADAYVAACDVPGIKRLLPS--- 119 (231)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~----v~~v~~~~~~~g---~~~~aD~vV~a~p~~~~~~Ll~~--- 119 (231)
++|++.+ | ++|++|++|++|..+++ + . .+.|++.. .+| +++.||+||+|+|++.+.++++.
T Consensus 247 ~~l~~~l---~~~~i~~~~~V~~I~~~~~--~--~~~~~~~~v~~~~-~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~ 318 (504)
T 1sez_A 247 DAICKDL---REDELRLNSRVLELSCSCT--E--DSAIDSWSIISAS-PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRG 318 (504)
T ss_dssp HHHHTTS---CTTTEETTCCEEEEEEECS--S--SSSSCEEEEEEBC-SSSSCBCCCEESEEEECSCHHHHHTSEEESSS
T ss_pred HHHHhhc---ccceEEcCCeEEEEEecCC--C--CcccceEEEEEcC-CCCccceeEECCEEEECCCHHHHHHHhhcccC
Confidence 8888754 5 79999999999998873 2 1 25566531 245 57899999999999999988731
Q ss_pred cccCchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCC-cceecCCCC----cceee-cc-cCCCCccc
Q 026885 120 SWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLD-NLLYTPDAD----FSCFA-DL-ALTSPEDY 192 (231)
Q Consensus 120 ~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~----~~~~~-~~-s~~~p~~~ 192 (231)
.+... ..+.++++.++..++|.|+++.... ..+ .+++.++.. ...+. .+ +...|. .
T Consensus 319 ~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~-------------~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~-~ 381 (504)
T 1sez_A 319 NPFLL---NFIPEVDYVPLSVVITTFKRENVKY-------------PLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPD-R 381 (504)
T ss_dssp SBCCC---TTSCCCCEEEEEEEEEEEEGGGBSS-------------CCCSSEEECCGGGGGGTCCSSEEEEHHHHCGG-G
T ss_pred CcccH---HHHhcCCCCceEEEEEEEchhhcCC-------------CCCceEEEcCCCCCCCCCccceEEeeccccCC-c
Confidence 11111 1256677779999999999865310 111 122121110 01110 01 112231 2
Q ss_pred ccCCCceEEEEEeecC--CCCCCCCHHHHHHHHHHHhhcc
Q 026885 193 YREGQGSLLQCVLTPG--DPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 193 ~~~~~~~~~~~~~s~~--~~~~~~~~eel~~~~~~~L~~~ 230 (231)
.|++ ..++..++... ..+..+++||+++.++++|+++
T Consensus 382 ~p~g-~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~ 420 (504)
T 1sez_A 382 APNN-VYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQL 420 (504)
T ss_dssp SCTT-EEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred CCCC-CEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHH
Confidence 3333 34555554422 3567889999999999999875
No 14
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.13 E-value=8e-10 Score=95.48 Aligned_cols=161 Identities=15% Similarity=0.022 Sum_probs=102.1
Q ss_pred CCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcc
Q 026885 42 KGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSW 121 (231)
Q Consensus 42 ~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~ 121 (231)
.+++. .+.+.+.+.+ |++|++|++|++|..++ + + +.|.+. +|+.+.||.||+|+|++.+.+|+++..
T Consensus 108 ~~g~~-~l~~~l~~~~---g~~i~~~~~V~~i~~~~---~--~-~~v~~~---~g~~~~ad~vV~A~p~~~~~~ll~~~~ 174 (342)
T 3qj4_A 108 PQGIS-SIIKHYLKES---GAEVYFRHRVTQINLRD---D--K-WEVSKQ---TGSPEQFDLIVLTMPVPEILQLQGDIT 174 (342)
T ss_dssp TTCTT-HHHHHHHHHH---TCEEESSCCEEEEEECS---S--S-EEEEES---SSCCEEESEEEECSCHHHHTTCBSTHH
T ss_pred CCCHH-HHHHHHHHhc---CCEEEeCCEEEEEEEcC---C--E-EEEEEC---CCCEEEcCEEEECCCHHHHHHHhcccc
Confidence 33443 5677766655 99999999999999876 3 2 345553 677789999999999999999987521
Q ss_pred --cCchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCc-ceeecccCCCCcccccCCCc
Q 026885 122 --REMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADF-SCFADLALTSPEDYYREGQG 198 (231)
Q Consensus 122 --~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~s~~~p~~~~~~~~~ 198 (231)
.+....+.+.++++.++.+|+|.|+++.. +.. +.+.++..+++.. +++.+.+. |.+..+++ +
T Consensus 175 ~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~----------~~~--~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~-~ 239 (342)
T 3qj4_A 175 TLISECQRQQLEAVSYSSRYALGLFYEAGTK----------IDV--PWAGQYITSNPCIRFVSIDNKK--RNIESSEI-G 239 (342)
T ss_dssp HHSCHHHHHHHHTCCBCCEEEEEEECSSCC------------CC--SCSEEECSSCSSEEEEEEHHHH--TTCCCC-C-C
T ss_pred cccCHHHHHHHhcCCccccEEEEEEECCCCc----------cCC--ceeeEEccCCcceEEEEccccC--CCCCCCCC-C
Confidence 12234567899999999999999997532 000 2233333333322 22222221 10011111 2
Q ss_pred eEEEEEeec--CCCCCCCCHHHHHHHHHHHhhcc
Q 026885 199 SLLQCVLTP--GDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 199 ~~~~~~~s~--~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
..+.+..++ ++.+.++++||+++.++++|+++
T Consensus 240 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (342)
T 3qj4_A 240 PSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENI 273 (342)
T ss_dssp CEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred ceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHh
Confidence 233343332 24678899999999999999875
No 15
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.11 E-value=1e-10 Score=105.69 Aligned_cols=163 Identities=13% Similarity=0.125 Sum_probs=104.2
Q ss_pred eeCCCCcchhHHHHHHHHHHC--------CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 40 MLKGSPDVYLSGPIRKYITDK--------GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 40 ~~~g~~~~~l~~~l~~~l~~~--------Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
..+|++. .+++.|++.+.+. |++|++|++|++|..++ + ++. |++ .+|+++.||+||+|+|+.
T Consensus 200 ~~~gG~~-~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~---~--~v~-v~~---~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 200 ADQRGYE-AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP---G--GVT-VKT---EDNSVYSADYVMVSASLG 269 (472)
T ss_dssp CCTTCTT-HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS---S--CEE-EEE---TTSCEEEESEEEECSCHH
T ss_pred ecCCcHH-HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC---C--cEE-EEE---CCCCEEEcCEEEEecCHH
Confidence 3467776 6889999888776 78999999999999887 3 443 655 378889999999999999
Q ss_pred hHhhhCCC--cccCchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCC--CcceeecccCC
Q 026885 112 GIKRLLPS--SWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDA--DFSCFADLALT 187 (231)
Q Consensus 112 ~~~~Ll~~--~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~s~~ 187 (231)
.+++++.. ...+....+.+.++.+.+++.++|.|++++.... . ....+++.... ...++...
T Consensus 270 ~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-------~----~~~~~~~~~~~~~~~~~~~~~--- 335 (472)
T 1b37_A 270 VLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-------K----GREFFLYASSRRGYYGVWQEF--- 335 (472)
T ss_dssp HHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS-------T----TCSEEEECCSSTTSSCEEEEC---
T ss_pred HhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC-------C----CcceEEecccCCccceeeecc---
Confidence 98875421 1122234456777777788999999998764100 0 01112222111 11222211
Q ss_pred CCcccccCCCceEEEEEeecC--CCCCCCCHHHHHHHHHHHhhcc
Q 026885 188 SPEDYYREGQGSLLQCVLTPG--DPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~s~~--~~~~~~~~eel~~~~~~~L~~~ 230 (231)
++. .+ + +.++.+++... +.+..++++|+++.++++|+++
T Consensus 336 ~~~--~p-~-~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~ 376 (472)
T 1b37_A 336 EKQ--YP-D-ANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKM 376 (472)
T ss_dssp TTT--ST-T-CCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cCC--CC-C-CCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 111 22 2 23444444422 2455679999999999999875
No 16
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.08 E-value=4.4e-10 Score=101.69 Aligned_cols=164 Identities=10% Similarity=0.042 Sum_probs=104.9
Q ss_pred eeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC---eEEecCEEEEcCChhhH
Q 026885 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK---KVVQADAYVAACDVPGI 113 (231)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g---~~~~aD~vV~a~p~~~~ 113 (231)
.+..++|+.. .|++.|++.+.+ ++|++|++|++|..++ + ++. |.+. +| +++.||+||+|+|+..+
T Consensus 230 ~~~~~~gG~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~~---~--~v~-v~~~---~g~~~~~~~ad~vI~a~p~~~l 297 (489)
T 2jae_A 230 MMFTPVGGMD-RIYYAFQDRIGT--DNIVFGAEVTSMKNVS---E--GVT-VEYT---AGGSKKSITADYAICTIPPHLV 297 (489)
T ss_dssp SEEEETTCTT-HHHHHHHHHHCG--GGEETTCEEEEEEEET---T--EEE-EEEE---ETTEEEEEEESEEEECSCHHHH
T ss_pred cEEeecCCHH-HHHHHHHHhcCC--CeEEECCEEEEEEEcC---C--eEE-EEEe---cCCeEEEEECCEEEECCCHHHH
Confidence 4666788876 699999988754 8899999999999886 3 443 5554 44 67899999999999988
Q ss_pred hhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCcceeecccCCCCcccc
Q 026885 114 KRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYY 193 (231)
Q Consensus 114 ~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~ 193 (231)
.+++.. .+....+.+.++++.++..++|.|++++.. . .. . ..........+...++. .+.. .
T Consensus 298 ~~l~~~--l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~----~---~~-~--~~g~~~~~~~~~~~~~~-~s~~-----~ 359 (489)
T 2jae_A 298 GRLQNN--LPGDVLTALKAAKPSSSGKLGIEYSRRWWE----T---ED-R--IYGGASNTDKDISQIMF-PYDH-----Y 359 (489)
T ss_dssp TTSEEC--CCHHHHHHHHTEECCCEEEEEEEESSCHHH----H---TT-C--CCSCEEEESSTTCEEEC-CSSS-----T
T ss_pred HhCccC--CCHHHHHHHHhCCCccceEEEEEeCCCCcc----C---CC-C--cccccccCCCCceEEEe-CCCC-----C
Confidence 887642 222344567888899999999999986530 0 00 0 01111112222111211 1111 1
Q ss_pred cCCCceEEEEEeec--CCCCCCCCHHHHHHHHHHHhhcc
Q 026885 194 REGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 194 ~~~~~~~~~~~~s~--~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
+...+.++..++.. +..+..++++|+++.++++|+++
T Consensus 360 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L~~~ 398 (489)
T 2jae_A 360 NSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEGSEI 398 (489)
T ss_dssp TSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHHHHH
Confidence 11123455444432 23466789999999999999864
No 17
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.98 E-value=7.1e-10 Score=100.73 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCCcccHHHHHHHHHHHH---hccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEe-ccCCCCcceEEEE
Q 026885 13 DCDNISARCMLTIFALFA---TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY-DKAANAETYVKGL 88 (231)
Q Consensus 13 ~~~~~Sa~~~~~~l~~~~---~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~-~~~~~~~~~v~~v 88 (231)
++.+.|+...+..++.|. ....++.++||+||++ .++++|.+.+++.||+|++|++|++|.. ++ | ++++|
T Consensus 220 ~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~-~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~---g--~v~gV 293 (475)
T 3p1w_A 220 DYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG-GIPEGFSRMCAINGGTFMLNKNVVDFVFDDD---N--KVCGI 293 (475)
T ss_dssp GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTT-HHHHHHHHHHHHC--CEESSCCEEEEEECTT---S--CEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHH-HHHHHHHHHHHHcCCEEEeCCeEEEEEEecC---C--eEEEE
Confidence 455678888777666543 2223567999999986 6999999999999999999999999999 44 6 89999
Q ss_pred EEEecCCCeEEecCEEEEcCChh
Q 026885 89 AMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 89 ~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
++. +|+++.||.||+|++..
T Consensus 294 ~~~---~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 294 KSS---DGEIAYCDKVICDPSYV 313 (475)
T ss_dssp EET---TSCEEEEEEEEECGGGC
T ss_pred EEC---CCcEEECCEEEECCCcc
Confidence 884 78889999999998754
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.86 E-value=4.4e-08 Score=88.66 Aligned_cols=161 Identities=11% Similarity=0.039 Sum_probs=102.2
Q ss_pred eeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe----EEecCEEEEcCChhh
Q 026885 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDVPG 112 (231)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~----~~~aD~vV~a~p~~~ 112 (231)
....+.|+.. .++++|++.+.+ +|++|++|++|..++ + + +.|.+. +|+ ++.||+||+|+|+..
T Consensus 232 ~~~~~~gG~~-~l~~~l~~~l~~---~i~~~~~V~~I~~~~---~--~-v~v~~~---~~~~~~~~~~ad~vI~t~p~~~ 298 (498)
T 2iid_A 232 RFDEIVDGMD-KLPTAMYRDIQD---KVHFNAQVIKIQQND---Q--K-VTVVYE---TLSKETPSVTADYVIVCTTSRA 298 (498)
T ss_dssp CEEEETTCTT-HHHHHHHHHTGG---GEESSCEEEEEEECS---S--C-EEEEEE---CSSSCCCEEEESEEEECSCHHH
T ss_pred ceEEeCCcHH-HHHHHHHHhccc---ccccCCEEEEEEECC---C--e-EEEEEe---cCCcccceEEeCEEEECCChHH
Confidence 3456788876 689999988764 899999999999876 3 3 355554 333 579999999999988
Q ss_pred HhhhC--CCcccCchHHHHhhCCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCcceeecccCCCCc
Q 026885 113 IKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPE 190 (231)
Q Consensus 113 ~~~Ll--~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~ 190 (231)
+.++. |. .+....+.+.++.+.++..|+|.|++++.+-. . ......+...+...++. .+..
T Consensus 299 ~~~i~f~p~--Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~------~-----~~~~~~~~~~~~~~~~~-~s~~--- 361 (498)
T 2iid_A 299 VRLIKFNPP--LLPKKAHALRSVHYRSGTKIFLTCTTKFWEDD------G-----IHGGKSTTDLPSRFIYY-PNHN--- 361 (498)
T ss_dssp HTTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCGGGGG------T-----CCSSEEEESSTTCEEEC-CSSC---
T ss_pred HhheecCCC--CCHHHHHHHHhCCCcceeEEEEEeCCCCccCC------C-----ccCCcccCCCCcceEEE-CCCC---
Confidence 87753 33 22234456788888899999999998754100 0 01122222222111111 0111
Q ss_pred ccccCCCceEEEEEee-c-CCCCCCCCHHHHHHHHHHHhhcc
Q 026885 191 DYYREGQGSLLQCVLT-P-GDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 191 ~~~~~~~~~~~~~~~s-~-~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
.|.+.+.++. ++. + +..+..++++|+++.++++|+++
T Consensus 362 --~p~g~~~L~~-~~~g~~a~~~~~~~~~~~~~~~l~~L~~~ 400 (498)
T 2iid_A 362 --FTNGVGVIIA-YGIGDDANFFQALDFKDCADIVFNDLSLI 400 (498)
T ss_dssp --CTTSCEEEEE-EEEHHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred --CCCCCcEEEE-EeCCccHhhhhcCCHHHHHHHHHHHHHHH
Confidence 2233333444 433 2 24677889999999999999864
No 19
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.66 E-value=2.7e-07 Score=82.58 Aligned_cols=90 Identities=12% Similarity=0.101 Sum_probs=67.6
Q ss_pred CCCcccHHHHHHHHHHHHhc---cccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEE
Q 026885 13 DCDNISARCMLTIFALFATK---TEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA 89 (231)
Q Consensus 13 ~~~~~Sa~~~~~~l~~~~~~---~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~ 89 (231)
++.+.++...+..+..+... ...+.+.+++|+.. .++++|.+.+++.|++|++|++|++|..++ + ++++|.
T Consensus 198 ~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~---~--~v~~v~ 271 (433)
T 1d5t_A 198 DYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLG-ELPQGFARLSAIYGGTYMLNKPVDDIIMEN---G--KVVGVK 271 (433)
T ss_dssp GGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCTT-HHHHHHHHHHHHHTCCCBCSCCCCEEEEET---T--EEEEEE
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEeC---C--EEEEEE
Confidence 45566665433333332221 11234778999975 799999999999999999999999999886 5 788876
Q ss_pred EEecCCCeEEecCEEEEcCChhh
Q 026885 90 MSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 90 ~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
. +|+++.||.||+|+++..
T Consensus 272 ~----~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 272 S----EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp E----TTEEEECSEEEECGGGCG
T ss_pred E----CCeEEECCEEEECCCCCc
Confidence 4 788999999999999763
No 20
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.61 E-value=2.3e-07 Score=82.02 Aligned_cols=112 Identities=10% Similarity=0.086 Sum_probs=71.0
Q ss_pred CCCCCCcccHHHHHHHHHH--HHhccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEE
Q 026885 10 GFIDCDNISARCMLTIFAL--FATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKG 87 (231)
Q Consensus 10 ~~~~~~~~Sa~~~~~~l~~--~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~ 87 (231)
.+.+++++|+.+++..+.. ......+. .....++.. .+++++.+.+ +.+|++|++|++|..++ + ++.
T Consensus 169 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~-~l~~~l~~~l---~~~v~~~~~V~~i~~~~---~--~v~- 237 (424)
T 2b9w_A 169 GYGHFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGTQ-AMFEHLNATL---EHPAERNVDITRITRED---G--KVH- 237 (424)
T ss_dssp CCCCTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCHH-HHHHHHHHHS---SSCCBCSCCEEEEECCT---T--CEE-
T ss_pred ccCChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChHH-HHHHHHHHhh---cceEEcCCEEEEEEEEC---C--EEE-
Confidence 3456789999887544332 11111111 234566664 5777776665 56899999999999876 4 443
Q ss_pred EEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEE
Q 026885 88 LAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVV 139 (231)
Q Consensus 88 v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~ 139 (231)
|.+. +|+ +.||.||+|+|+..+.++++..+ ...+.+.++++.++.
T Consensus 238 v~~~---~g~-~~ad~Vv~a~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~ 282 (424)
T 2b9w_A 238 IHTT---DWD-RESDVLVLTVPLEKFLDYSDADD---DEREYFSKIIHQQYM 282 (424)
T ss_dssp EEES---SCE-EEESEEEECSCHHHHTTSBCCCH---HHHHHHTTCEEEEEE
T ss_pred EEEC---CCe-EEcCEEEECCCHHHHhhccCCCH---HHHHHHhcCCcceeE
Confidence 6552 554 89999999999988877776422 122234556555543
No 21
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.54 E-value=4e-07 Score=85.84 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=70.3
Q ss_pred eeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCCeEEecCEEEEcCChhhHhh
Q 026885 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKR 115 (231)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~---~~~g~~~~aD~vV~a~p~~~~~~ 115 (231)
...+||++ .|+++|.+ |.+|++|++|++|..+++ + ..|++.+ +++|+++.||+||+|+|+..+++
T Consensus 394 ~~~~gG~~-~l~~~La~-----~l~I~l~~~V~~I~~~~~--~----v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~ 461 (662)
T 2z3y_A 394 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTAS--G----CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 461 (662)
T ss_dssp EEETTCTT-HHHHHHTT-----TCEEETTEEEEEEEEETT--E----EEEEEEESSCTTCEEEEEESEEEECCCHHHHHC
T ss_pred eeecCcHH-HHHHHHHh-----cCceecCCeEEEEEECCC--c----EEEEEeecccCCCCeEEEeCEEEECCCHHHHhc
Confidence 44567775 57777664 568999999999999872 2 3454432 11267899999999999999987
Q ss_pred hC------CCcccCchHHHHhhCCCCCcEEEEEEEecCccc
Q 026885 116 LL------PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (231)
Q Consensus 116 Ll------~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (231)
+. |.. +....+.+.++.+.++..|+|.|++++.
T Consensus 462 l~~~i~f~P~L--P~~k~~Ai~~l~~g~~~KV~l~f~~~fW 500 (662)
T 2z3y_A 462 QPPAVQFVPPL--PEWKTSAVQRMGFGNLNKVVLCFDRVFW 500 (662)
T ss_dssp SSCSSEEESCC--CHHHHHHHHHSEECCCEEEEEECSSCCS
T ss_pred ccCceEEcCCC--CHHHHHHHHhCCccceeEEEEEcCcccc
Confidence 42 321 1122345778888899999999999765
No 22
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.49 E-value=4.4e-07 Score=87.81 Aligned_cols=100 Identities=10% Similarity=0.037 Sum_probs=70.5
Q ss_pred eeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCCeEEecCEEEEcCChhhHhh
Q 026885 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKR 115 (231)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~---~~~g~~~~aD~vV~a~p~~~~~~ 115 (231)
...+||++ .|+++|.+ +.+|++|++|++|..++ + . +.|++.+ ++.|+++.||+||+|+|+..+++
T Consensus 565 ~~~~gG~~-~L~~aLa~-----~l~I~Lnt~V~~I~~~~---~--g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~ 632 (852)
T 2xag_A 565 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTA---S--G-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 632 (852)
T ss_dssp EEETTCTT-HHHHHHTT-----TCCEECSEEEEEEEEET---T--E-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHC
T ss_pred EEecCcHH-HHHHHHHh-----CCCEEeCCeEEEEEEcC---C--c-EEEEEeecccCCCCeEEECCEEEECCCHHHHHh
Confidence 45677875 57777765 45799999999999987 3 2 3455442 11267899999999999999987
Q ss_pred hCCCc----ccCchHHHHhhCCCCCcEEEEEEEecCccc
Q 026885 116 LLPSS----WREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (231)
Q Consensus 116 Ll~~~----~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (231)
++..- ..+....+.+.++.+.++..|+|.|++++.
T Consensus 633 l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW 671 (852)
T 2xag_A 633 QPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFW 671 (852)
T ss_dssp SSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCS
T ss_pred hhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCccc
Confidence 53210 011122345778888899999999999765
No 23
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.48 E-value=4.3e-06 Score=71.20 Aligned_cols=148 Identities=11% Similarity=0.133 Sum_probs=92.0
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEe-cCEEEEcCChhhHhhhCCCcccCchHHHH
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDVPGIKRLLPSSWREMKFFNN 129 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~-aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~ 129 (231)
+.+.+.+.+ |++|+++++|++|..+++ + +.|.+ .+|+... ||.||.|.|.+...++++.. ......
T Consensus 110 ~~l~~~l~~-g~~i~~~~~v~~i~~~~~--~----~~v~~---~~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~ 176 (336)
T 1yvv_A 110 SAITRAMRG-DMPVSFSCRITEVFRGEE--H----WNLLD---AEGQNHGPFSHVIIATPAPQASTLLAAA---PKLASV 176 (336)
T ss_dssp HHHHHHHHT-TCCEECSCCEEEEEECSS--C----EEEEE---TTSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHH
T ss_pred HHHHHHHHc-cCcEEecCEEEEEEEeCC--E----EEEEe---CCCcCccccCEEEEcCCHHHHHHhhccC---HHHHHH
Confidence 445555544 899999999999998862 3 33554 3677664 99999999999888877642 233455
Q ss_pred hhCCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCCCCcceeecccCCCCcccccCCCceEEEEEeec--
Q 026885 130 IYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTP-- 207 (231)
Q Consensus 130 ~~~l~~~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~s~-- 207 (231)
+..+++.++..+.+.|+++... +...+ +..+....++.+.+. -|.+ .+.+..+.++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-~~~~~~~~~l~~~~~-~p~~---~~~~~~~v~~~~~~~ 237 (336)
T 1yvv_A 177 VAGVKMDPTWAVALAFETPLQT--------------PMQGC-FVQDSPLDWLARNRS-KPER---DDTLDTWILHATSQW 237 (336)
T ss_dssp HTTCCEEEEEEEEEEESSCCSC--------------CCCEE-EECSSSEEEEEEGGG-STTC---CCSSEEEEEEECHHH
T ss_pred HhhcCccceeEEEEEecCCCCC--------------CCCeE-EeCCCceeEEEecCc-CCCC---CCCCcEEEEEeCHHH
Confidence 7788888999999999986540 12222 222322222211110 0110 0111122222221
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc
Q 026885 208 GDPYMPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 208 ~~~~~~~~~eel~~~~~~~L~~~ 230 (231)
++.+..++++++.+++.++++++
T Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~ 260 (336)
T 1yvv_A 238 SRQNLDASREQVIEHLHGAFAEL 260 (336)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHH
Confidence 34677899999999999998764
No 24
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.47 E-value=1.3e-06 Score=81.94 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=78.6
Q ss_pred ccHHHHHHHHHHHH---hccccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEec
Q 026885 17 ISARCMLTIFALFA---TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA 93 (231)
Q Consensus 17 ~Sa~~~~~~l~~~~---~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~ 93 (231)
.++...+..+..++ .+...+.+.|+.||.+ .|.++|.+.+++.||+|++|++|++|.++++ .| +++||++
T Consensus 346 ~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g-~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~-~g--~v~gV~~--- 418 (650)
T 1vg0_A 346 SCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQG-ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKE-SR--KCKAVID--- 418 (650)
T ss_dssp CBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTT-HHHHHHHHHHHHTTCEEESSCCEEEEEEETT-TC--CEEEEEE---
T ss_pred CchhHHHHHHHHHHHHHHhhccCceEEeCCchh-HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCC-CC--eEEEEEe---
Confidence 46666554444433 2222347899999986 6999999999999999999999999999761 14 7999875
Q ss_pred CCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCccc
Q 026885 94 TDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (231)
Q Consensus 94 ~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (231)
.+|+++.||.||++.. . +|.... ..+....++-+.+++++++.
T Consensus 419 ~~Ge~i~A~~VVs~~~--~----lp~~~~--------~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 419 QFGQRIISKHFIIEDS--Y----LSENTC--------SRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TTSCEEECSEEEEEGG--G----BCTTTT--------TTCCCEEEEEEEEEESSCSS
T ss_pred CCCCEEEcCEEEEChh--h----cCHhHh--------ccccccceEEEEEEecCCCC
Confidence 3799999999999432 2 332211 01122356677778888764
No 25
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.45 E-value=8.5e-06 Score=71.98 Aligned_cols=132 Identities=14% Similarity=0.045 Sum_probs=83.1
Q ss_pred HHHHHcCCCCCCcccHHHHHHHHHHHHhcc----ccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCC
Q 026885 4 PVAYALGFIDCDNISARCMLTIFALFATKT----EASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAA 79 (231)
Q Consensus 4 pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~----~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~ 79 (231)
+++......+++++|+..++..+......- ..... .+.+++. .+++. .+++.| +|++|++|++|..++
T Consensus 162 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~-~l~~~---~~~~~g-~i~~~~~V~~i~~~~-- 233 (431)
T 3k7m_X 162 AWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGSA-DLVDA---MSQEIP-EIRLQTVVTGIDQSG-- 233 (431)
T ss_dssp HHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTH-HHHHH---HHTTCS-CEESSCCEEEEECSS--
T ss_pred HHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcHH-HHHHH---HHhhCC-ceEeCCEEEEEEEcC--
Confidence 445556777888899988776655321100 00111 3455543 23333 334456 999999999999876
Q ss_pred CCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCccc
Q 026885 80 NAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (231)
Q Consensus 80 ~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (231)
+ ++ .|.+ .+|++++||.||+|+|+..++++.-....+....+.+..+.....+.|.+.|+.++.
T Consensus 234 -~--~v-~v~~---~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 234 -D--VV-NVTV---KDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp -S--SE-EEEE---TTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred -C--eE-EEEE---CCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 3 33 3555 377789999999999999888763111112223344566666677999999998654
No 26
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.44 E-value=6.1e-07 Score=86.04 Aligned_cols=145 Identities=16% Similarity=0.172 Sum_probs=87.5
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhh----CCCcccCchHHHHhhCCCC
Q 026885 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL----LPSSWREMKFFNNIYALVG 135 (231)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~L----l~~~~~~~~~~~~~~~l~~ 135 (231)
.|++|++|++|++|..++ + ++ .|++ .+|+++.||+||+|+|+..+++. .|.. +....+.+.++.+
T Consensus 542 ~gl~I~l~t~V~~I~~~~---~--~v-~V~~---~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L--p~~~~~ai~~l~~ 610 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSG---D--EV-QVTT---TDGTGYSAQKVLVTVPLALLQKGAIQFNPPL--SEKKMKAINSLGA 610 (776)
T ss_dssp TTSCEESSCCEEEEECSS---S--SE-EEEE---TTCCEEEESEEEECCCHHHHHTTCSEEESCC--CHHHHHHHHHEEE
T ss_pred hCCcEEcCCeeEEEEEcC---C--EE-EEEE---CCCcEEEcCEEEECCCHHHHhhcccccCCCC--CHHHHHHHHhCCC
Confidence 488999999999999886 3 33 3555 37888999999999999988752 2321 1223445677777
Q ss_pred CcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcceecCC--CCcceeecccCCCCcccccCCCceEEEEEeec--CCCC
Q 026885 136 VPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPD--ADFSCFADLALTSPEDYYREGQGSLLQCVLTP--GDPY 211 (231)
Q Consensus 136 ~~i~~v~L~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~s~--~~~~ 211 (231)
.++..++|.|++++... ... ..+.+-+... .....+..+-..+| .+.+.++..++.. +..+
T Consensus 611 g~~~KV~l~f~~~FW~~-------~~~---g~~~fG~l~~~~~~~~~~~~~~d~~p-----~g~~~vL~~~i~G~~a~~l 675 (776)
T 4gut_A 611 GIIEKIALQFPYRFWDS-------KVQ---GADFFGHVPPSASKRGLFAVFYDMDP-----QKKHSVLMSVIAGEAVASV 675 (776)
T ss_dssp ECCEEEEEECSSCTTHH-------HHT---TCSEEEECCSSGGGTTEEEEEEESCT-----TSCSCEEEEEECTHHHHHH
T ss_pred eeEEEEEEecCcccccc-------cCC---CCceEEeecCCcCCCceEEEEecCCC-----CCCceEEEEEecchhHHHH
Confidence 78899999999976411 010 1111111110 01111111101122 1223344444442 2456
Q ss_pred CCCCHHHHHHHHHHHhhcc
Q 026885 212 MPLPNDEIIRRVAKQVGSV 230 (231)
Q Consensus 212 ~~~~~eel~~~~~~~L~~~ 230 (231)
..++++|+++.++++|+++
T Consensus 676 ~~lsdeel~~~~l~~L~~i 694 (776)
T 4gut_A 676 RTLDDKQVLQQCMATLREL 694 (776)
T ss_dssp HTSCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHH
Confidence 7889999999999999875
No 27
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.30 E-value=3.1e-06 Score=76.09 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=58.4
Q ss_pred ceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEec--cCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~--~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+.+.+++|+.. .++++|++.+++.||+|++|++|++|..+ + + ++++|++ +|+++.||.||+|+++.
T Consensus 232 ~~~~~p~gG~~-~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~---~--~~~~V~~----~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 232 SPYLYPMYGLG-ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT---G--KFEGVKT----KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp CSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT---T--EEEEEEE----TTEEEECSCEEECGGGC
T ss_pred CceEeeCCCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC---C--eEEEEEE----CCeEEECCEEEECCCcc
Confidence 45678999986 69999999999999999999999999988 5 5 7888876 78899999999999876
No 28
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.26 E-value=2.3e-06 Score=78.02 Aligned_cols=98 Identities=9% Similarity=0.004 Sum_probs=71.4
Q ss_pred eeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhh--
Q 026885 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL-- 116 (231)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~L-- 116 (231)
.+++| + +.++++|++.+. +++|++|++|++|..+++ + ...|++ .+|+++.||+||+|+|+..++..
T Consensus 196 ~~~~g-~-~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~--~---~v~v~~---~~g~~~~ad~VI~t~p~~~l~~~~~ 263 (516)
T 1rsg_A 196 AFALN-Y-DSVVQRIAQSFP--QNWLKLSCEVKSITREPS--K---NVTVNC---EDGTVYNADYVIITVPQSVLNLSVQ 263 (516)
T ss_dssp EEESC-H-HHHHHHHHTTSC--GGGEETTCCEEEEEECTT--S---CEEEEE---TTSCEEEEEEEEECCCHHHHHGGGS
T ss_pred hhhhC-H-HHHHHHHHHhCC--CCEEEECCEEEEEEEcCC--C---eEEEEE---CCCcEEECCEEEECCCHHHhhhccc
Confidence 35666 4 367777776664 368999999999998641 2 245665 37888999999999999988643
Q ss_pred -----------CCCcccCchHHHHhhCCCCCcEEEEEEEecCccc
Q 026885 117 -----------LPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (231)
Q Consensus 117 -----------l~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (231)
.|. .+....+.+.++.+.++..|+|.|++++.
T Consensus 264 ~~~~~~~~i~f~P~--Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW 306 (516)
T 1rsg_A 264 PEKNLRGRIEFQPP--LKPVIQDAFDKIHFGALGKVIFEFEECCW 306 (516)
T ss_dssp SCSCSTTCCEEESC--CCHHHHHHTTSSCCCCCEEEEEEESSCCS
T ss_pred cccccccceEecCC--CCHHHHHHHHhCCCCcceEEEEEeCCCCC
Confidence 232 12234456788888899999999998764
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.22 E-value=3.5e-07 Score=81.24 Aligned_cols=110 Identities=9% Similarity=-0.053 Sum_probs=77.9
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhccc---cceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEecc
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTE---ASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~~---~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (231)
||+|++....+.+|+++||.|+..+-.++..... +...|+|+||+. .+++.|+ ++.|++|++|++|+++
T Consensus 175 ~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~-~l~e~l~---~~~g~~V~l~~~v~~~---- 246 (397)
T 3hdq_A 175 FFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYT-RMFQNML---SSPNIKVMLNTDYREI---- 246 (397)
T ss_dssp HTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHH-HHHHHHT---CSTTEEEEESCCGGGT----
T ss_pred HHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHH-HHHHHHH---hccCCEEEECCeEEec----
Confidence 5899999999999999999976422111211111 112378999996 5777764 4679999999999833
Q ss_pred CCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCc
Q 026885 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (231)
Q Consensus 78 ~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~ 148 (231)
+ ..+.+|.||+|+|++.+... .+.+|++.++.++++.++.+
T Consensus 247 ---~---------------~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 247 ---A---------------DFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp ---T---------------TTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSS
T ss_pred ---c---------------ccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccc
Confidence 1 12358999999998776321 24567788999999999864
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.12 E-value=9.5e-08 Score=83.80 Aligned_cols=111 Identities=11% Similarity=-0.087 Sum_probs=77.9
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhccc--cce-eeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEecc
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTE--ASL-LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~~--~~~-~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (231)
||+|++.+..+.+|+++||.++..+...+..... ... .|+++||+. .++++|++ |++|++|++|++|. +
T Consensus 147 ~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~-----g~~i~l~~~V~~i~--~ 218 (367)
T 1i8t_A 147 LIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYT-KLIEKMLE-----GVDVKLGIDFLKDK--D 218 (367)
T ss_dssp HTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHH-HHHHHHHT-----TSEEECSCCGGGSH--H
T ss_pred HHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHH-HHHHHHhc-----CCEEEeCCceeeec--h
Confidence 5789999999999999999875211111111111 112 468999986 57777776 79999999999873 2
Q ss_pred CCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCcc
Q 026885 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (231)
Q Consensus 78 ~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~ 149 (231)
+ | .+.+|+||+|+|++.+.++ .+.++++.++.++.+.+|++.
T Consensus 219 ------~---v---------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 219 ------S---L---------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp ------H---H---------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSC
T ss_pred ------h---h---------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEecccc
Confidence 2 1 1358999999999876543 234567788999999999753
No 31
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.82 E-value=5.7e-07 Score=79.65 Aligned_cols=113 Identities=8% Similarity=-0.163 Sum_probs=78.7
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhccc-cc-ee-eeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEecc
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTE-AS-LL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~~-~~-~~-g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (231)
+|+|++.+..+.+++++|+.++..+...+..... .. .+ ++++||+. .++++|++ +.|++|++|++|++|. .
T Consensus 157 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l~~~V~~I~--~ 230 (399)
T 1v0j_A 157 FVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYT-AWLQNMAA---DHRIEVRLNTDWFDVR--G 230 (399)
T ss_dssp HTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHH-HHHHHHTC---STTEEEECSCCHHHHH--H
T ss_pred HHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHH-HHHHHHHh---cCCeEEEECCchhhhh--h
Confidence 4789988889999999999885211111111111 11 23 58899875 57777776 5789999999999884 2
Q ss_pred CCCCcceEEEEEEEecCCCeEE-ecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecCc
Q 026885 78 AANAETYVKGLAMSKATDKKVV-QADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (231)
Q Consensus 78 ~~~~~~~v~~v~~~~~~~g~~~-~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~ 148 (231)
. | + .+ .||+||+|+|+..+.++. +.++++.++.++.+.+|.+
T Consensus 231 ------~---v------~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 231 ------Q---L------R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp ------H---H------T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred ------h---h------h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 2 1 1 23 699999999998876551 3356677888999988864
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.68 E-value=2.5e-06 Score=75.15 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=75.0
Q ss_pred CchHHHHHcCCCCCCcccHHHHHHHHHHHHhcc---ccceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceee-EEEec
Q 026885 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKT---EASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR-EILYD 76 (231)
Q Consensus 1 ~w~pl~~a~~~~~~~~~Sa~~~~~~l~~~~~~~---~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~-~i~~~ 76 (231)
||+|++.+..+.+|+++|+.++..+...+.... .+.-.++++||+. .++++|++ +.|++|++|++|+ +|.
T Consensus 151 ~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l~~~V~~~i~-- 224 (384)
T 2bi7_A 151 FFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYT-QMIKSILN---HENIKVDLQREFIVEER-- 224 (384)
T ss_dssp HTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHH-HHHHHHHC---STTEEEEESCCCCGGGG--
T ss_pred HHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHH-HHHHHHHh---cCCCEEEECCeeehhhh--
Confidence 478999999999999999997521111111111 1112368999986 57887776 4689999999998 661
Q ss_pred cCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhCCCCCcEEEEEEEecC
Q 026885 77 KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNG 147 (231)
Q Consensus 77 ~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~ 147 (231)
+ .+|+||+|+|++.+.+++ +.++++.++.++++.+|.
T Consensus 225 -------~---------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d~ 261 (384)
T 2bi7_A 225 -------T---------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQG 261 (384)
T ss_dssp -------G---------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEES
T ss_pred -------c---------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeCC
Confidence 0 289999999998876652 234667788888888873
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.43 E-value=0.00035 Score=61.73 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHHCCcEEEcCc---eeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRW---GCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~---~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.++++|++|++++ +|++|..++ + ++++|++. +|+++.||.||.|+....
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~---~--~v~gV~t~---~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN---N--DVKGAVTA---DGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET---T--EEEEEEET---TTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC---C--eEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 678999999999999999999 999999876 5 78889874 787899999999988764
No 34
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.34 E-value=0.00067 Score=64.38 Aligned_cols=109 Identities=8% Similarity=-0.086 Sum_probs=74.0
Q ss_pred ceeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceee--EEEeccCCCCc---ceEEEEEEEecCCCe--EEecCEEEEcC
Q 026885 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR--EILYDKAANAE---TYVKGLAMSKATDKK--VVQADAYVAAC 108 (231)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~--~i~~~~~~~~~---~~v~~v~~~~~~~g~--~~~aD~vV~a~ 108 (231)
.....+.||.. .|+++|.+.+.. |++|++|++|+ +|..+++ +. .....|... .+|+ ++.||+||+|+
T Consensus 337 ~~~~~i~GG~~-~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~--g~~~~~~~V~V~~~--~~G~~~~~~aD~VIvTv 410 (721)
T 3ayj_A 337 NEYTLPVTENV-EFIRNLFLKAQN-VGAGKLVVQVRQERVANACH--SGTASARAQLLSYD--SHNAVHSEAYDFVILAV 410 (721)
T ss_dssp CEECCSSSSTH-HHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEE--CSSSSCCEEEEEEE--TTCCEEEEEESEEEECS
T ss_pred cceeEECCcHH-HHHHHHHHhccc-CCceEeCCEEEeeeEEECCC--CCccccceEEEEEe--cCCceEEEEcCEEEECC
Confidence 35666778875 689999998753 78899999999 9998752 20 012233222 3566 78899999999
Q ss_pred ChhhHhhh-----CC----------------------Ccc-c-C-------chHHHHhhCCCCCcEEEEEEEe-----cC
Q 026885 109 DVPGIKRL-----LP----------------------SSW-R-E-------MKFFNNIYALVGVPVVTVQLRY-----NG 147 (231)
Q Consensus 109 p~~~~~~L-----l~----------------------~~~-~-~-------~~~~~~~~~l~~~~i~~v~L~~-----d~ 147 (231)
|+..+..+ +. ..+ . + ....+.+.++.+.+..=|.+.| ++
T Consensus 411 P~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~ 490 (721)
T 3ayj_A 411 PHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQ 490 (721)
T ss_dssp CHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGS
T ss_pred CHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCC
Confidence 99887431 11 000 1 1 2334557888888999999999 66
Q ss_pred ccc
Q 026885 148 WVT 150 (231)
Q Consensus 148 ~~~ 150 (231)
++.
T Consensus 491 ~fW 493 (721)
T 3ayj_A 491 PWV 493 (721)
T ss_dssp TTS
T ss_pred Ccc
Confidence 653
No 35
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.26 E-value=0.00069 Score=59.70 Aligned_cols=57 Identities=21% Similarity=0.150 Sum_probs=49.8
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + ++.+|++. +|++++||.||.++..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~v~l~---dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG---T--KVTGVRMQ---DGSVIPADIVIVGIGI 249 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS---S--BEEEEEES---SSCEEECSEEEECSCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC---C--cEEEEEeC---CCCEEEcCEEEECCCC
Confidence 34678889999999999999999999999875 5 78889885 8889999999999885
No 36
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.25 E-value=0.00069 Score=59.53 Aligned_cols=57 Identities=23% Similarity=0.261 Sum_probs=49.8
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + ++.+|++. +|++++||.||.++..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~V~~~---dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG---D--RVTGVVLS---DGNTLPCDLVVVGVGV 239 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TSCEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC---C--cEEEEEeC---CCCEEEcCEEEECcCC
Confidence 34678889999999999999999999998875 5 78889884 8889999999999875
No 37
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.09 E-value=0.0012 Score=58.88 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=49.4
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
...+.+.|.+.+++.|++|+++++|++|..++ + ++.+|.+. +|+++.||.||.|....
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~---~--~v~~V~~~---~G~~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN---G--QTKAVILQ---TGEVLETNHVVIAVGGK 190 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TCCEEECSCEEECCCCS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC---C--cEEEEEEC---CCCEEECCEEEECCCCC
Confidence 35788999999999999999999999999876 5 77888774 67779999999998753
No 38
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.01 E-value=0.0013 Score=59.74 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecC-EEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQAD-AYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD-~vV~a~p~ 110 (231)
.+.+.|.+.++++|++|+++++|++|..+++ | +++||++.. +|+ ++.|| .||+|+.-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~--g--~v~GV~~~~--~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT--G--RVVGIVAKQ--YGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT--C--CEEEEEEEE--TTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC--C--cEEEEEEEE--CCcEEEEEeCCeEEEeCCC
Confidence 6899999999999999999999999999842 6 899998863 343 57897 89988763
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.96 E-value=0.0016 Score=55.50 Aligned_cols=57 Identities=7% Similarity=-0.063 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.++++|++|+++++|++|..++ + +++.|.+. +| .++.||.||.|+....
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~~~~v~~~---~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRVRP---E--GGFELDFG---GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECT---T--SSEEEEEC---TTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcC---C--ceEEEEEC---CCceeEEEeCEEEECCCcch
Confidence 678899999999999999999999999986 2 33456653 55 4889999999998753
No 40
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.95 E-value=0.0016 Score=59.97 Aligned_cols=57 Identities=14% Similarity=0.288 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+. +|+++.||.||.|.....
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~---~--~v~gV~l~---~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMED---G--QITGVTLS---NGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESS---S--BEEEEEET---TSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeC---C--EEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 578899999999999999999999999886 5 78889884 788899999999988643
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.84 E-value=0.0023 Score=54.86 Aligned_cols=55 Identities=15% Similarity=-0.026 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.++++|++|+++++|++|..++ + + ++|++. +| ++.||.||.|+....
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~t~---~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRRVD---G--A-WEVRCD---AG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEEET---T--E-EEEECS---SE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEeC---C--e-EEEEeC---CC-EEEcCEEEECCChhH
Confidence 688999999999999999999999999886 4 3 556552 44 789999999988753
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.83 E-value=0.004 Score=53.66 Aligned_cols=56 Identities=11% Similarity=0.147 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++.+|.+. +| ++.||.||.|+....
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~v~gv~~~---~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIEN---N--EIKGVKTN---KG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEET---TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEEC---C--EEEEEEEC---Cc-EEECCEEEECcchhH
Confidence 578889999999999999999999999876 4 67778762 44 789999999988653
No 43
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.71 E-value=0.0032 Score=54.37 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=51.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-Hhhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~L 116 (231)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++++|.+...+++++++||.||.|...+. +.+.
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~ 167 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC---C--EEEEEEEEECCeEEEEEcCEEEECCCcchHhHHh
Confidence 467888999999999999999999999886 5 78888875434567899999999988653 4443
No 44
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.64 E-value=0.0022 Score=56.47 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=46.9
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|..++ ++.+|++. +|++++||.||.++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~---dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG------QLEQVMAS---DGRSFVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS------SCCEEEET---TSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC---CCCEEEcCEEEEeeCC
Confidence 3567888999999999999999999998654 46678874 8899999999999885
No 45
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.62 E-value=0.0053 Score=56.48 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=49.0
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
..+.+.|.+.+++.|++|+++++|++|..+++ | +++||++.. .+|+ ++.||.||.|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK--G--TVKGILVKG-MYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT--S--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC--C--eEEEEEEEe-CCCcEEEEECCeEEEeCCC
Confidence 46889999999999999999999999998752 5 899998753 2565 6889999999874
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.60 E-value=0.004 Score=53.95 Aligned_cols=55 Identities=11% Similarity=0.068 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+. +| ++.||.||.|+...
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~~~v~~~---~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG---E--KVTGVKTT---RG-TIHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEET---TC-CEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC---C--EEEEEEeC---Cc-eEECCEEEECCchh
Confidence 578889999999999999999999999876 4 67788763 55 78999999998864
No 47
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.55 E-value=0.0055 Score=56.39 Aligned_cols=65 Identities=17% Similarity=0.114 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh--HhhhC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG--IKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~--~~~Ll 117 (231)
.+...+.+.++++|++|+++++|++|..++ + ++++|++.+..+| ..+.||.||.|+.+.. +.+++
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~---g--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIYDQ---G--KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcC---C--eEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 678889999999999999999999999986 5 7899988642223 5789999999988753 44444
No 48
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.51 E-value=0.0083 Score=53.63 Aligned_cols=56 Identities=20% Similarity=0.179 Sum_probs=46.8
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.+++.|++|+++++|++|..++ + ++. +.+. +|+++++|.||.++..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~-v~~~---~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN---G--KVA-RVIT---DKRTLDADLVILAAGV 256 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEE-EEEE---SSCEEECSEEEECSCE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC---C--eEE-EEEe---CCCEEEcCEEEECCCC
Confidence 34678899999999999999999999998855 4 454 6664 7889999999999885
No 49
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.51 E-value=0.007 Score=50.63 Aligned_cols=59 Identities=12% Similarity=0.121 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEec---CCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA---TDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~---~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.+.+.+++.|++|+++++|++|..++ + ++.+|++... ++++++++|.||.++...
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQ---M--GVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECS---S--SEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCC---C--ceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 467788888899999999999999998775 4 6788887631 123678999999998864
No 50
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.50 E-value=0.0059 Score=54.13 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=47.4
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEe--ccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~--~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|++|+++++|++|.. ++ + ++.+|.+. +|+++++|.||.++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---~--~v~~v~~~---~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ---Q--KVTAVLCE---DGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT---C--CEEEEEET---TSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC---C--cEEEEEeC---CCCEEEcCEEEECCCC
Confidence 35678889999999999999999999987 44 4 67788774 7889999999999874
No 51
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.46 E-value=0.0058 Score=57.38 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+...|.+.+++.|++|+++++|++|..++ + + ++|.+ .+|+++.||.||.|+....
T Consensus 418 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~-v~V~t---~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 418 ELTRNVLELAQQQGLQIYYQYQLQNFSRKD---D--C-WLLNF---AGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEeC---C--e-EEEEE---CCCCEEECCEEEECCCcch
Confidence 678899999999999999999999999987 4 3 35655 3677899999999988763
No 52
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.44 E-value=0.0065 Score=54.06 Aligned_cols=56 Identities=13% Similarity=0.062 Sum_probs=46.4
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + ++..+.+ +|+++++|.||.++..
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~v~~v~~----~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD---D--EIITKTL----DGKEIKSDIAILCIGF 245 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEET---T--EEEEEET----TSCEEEESEEEECCCE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC---C--eEEEEEe----CCCEEECCEEEECcCC
Confidence 34678889999999999999999999998644 4 5655643 7788999999999885
No 53
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.43 E-value=0.0058 Score=54.02 Aligned_cols=56 Identities=14% Similarity=0.088 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEe---------------ccCCCCcceEEEEEEEecCCCeEE--ecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILY---------------DKAANAETYVKGLAMSKATDKKVV--QADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~---------------~~~~~~~~~v~~v~~~~~~~g~~~--~aD~vV~a~p~ 110 (231)
.+.+.|.+.++++|++|+.+++|++|.. ++ + ++++|.+. +| ++ .||.||.|+..
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~---~--~v~~V~t~---~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE---A--RASAAVLS---DG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC---E--EEEEEEET---TS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC---C--ceEEEEeC---CC-EEeecCCEEEECCCc
Confidence 6788999999999999999999999998 44 4 67778763 55 67 99999999987
Q ss_pred hh
Q 026885 111 PG 112 (231)
Q Consensus 111 ~~ 112 (231)
..
T Consensus 253 ~s 254 (448)
T 3axb_A 253 WS 254 (448)
T ss_dssp GH
T ss_pred CH
Confidence 53
No 54
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.37 E-value=0.008 Score=55.39 Aligned_cols=59 Identities=22% Similarity=0.234 Sum_probs=47.7
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
..+.+.|.+.+++.|++|+++++|++|..+++ | +++||++.. .+|+ ++.||.||+|+.-
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~--g--~v~GV~~~~-~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS--G--KVTGVLVKG-EYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----C--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC--C--eEEEEEEEe-CCCcEEEEEcCEEEEeCCC
Confidence 36789999999999999999999999988752 4 799998752 2454 6789999999873
No 55
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.34 E-value=0.0088 Score=54.94 Aligned_cols=59 Identities=15% Similarity=0.148 Sum_probs=48.7
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
..+.+.|.+.+++.|++|+++++|++|..+++ | +++||++.. .+|+ ++.||.||.|+..
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD--H--SVVGAVVHG-KHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT--S--BEEEEEEEE-TTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC--C--cEEEEEEEe-CCCcEEEEEcCEEEEecCC
Confidence 35789999999999999999999999998762 5 899998752 2565 6889999999774
No 56
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.31 E-value=0.01 Score=56.99 Aligned_cols=56 Identities=20% Similarity=0.149 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.++++|++|+.+++|++|..++ + ++++|.+. +| ++.||.||.|+....
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~---~--~v~~V~t~---~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG---G--RVTGVQTA---DG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEET---TE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC---C--EEEEEEEC---Cc-EEECCEEEECCccch
Confidence 578999999999999999999999999876 5 67788762 44 799999999998754
No 57
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.31 E-value=0.0075 Score=56.81 Aligned_cols=55 Identities=9% Similarity=0.058 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe-EEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~-~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++.|++|+++++|++|..++ + + +.|.+. +|+ ++.||.||.|+...
T Consensus 413 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~-v~V~t~---~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 413 DLTHALMMLAQQNGMTCHYQHELQRLKRID---S--Q-WQLTFG---QSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECS---S--S-EEEEEC----CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCeEeEEEEeC---C--e-EEEEeC---CCcEEEECCEEEECCCcc
Confidence 678999999999999999999999999987 3 3 456553 666 78999999998876
No 58
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.31 E-value=0.01 Score=54.72 Aligned_cols=60 Identities=12% Similarity=0.061 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~ 112 (231)
.+...+.+.++++|++|+.+++|++|..++ + ++++|++.+..+| ..+.||.||.|+.+..
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~---~--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG---D--QIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC---C--EEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 567788899999999999999999999986 5 7889987532123 3789999999988753
No 59
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.27 E-value=0.0088 Score=51.40 Aligned_cols=54 Identities=15% Similarity=0.009 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++.|++|+++++|++|..++ + ++ +|.+. +| ++.||.||.|+...
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~-~v~~~---~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDG---E--AL-FIKTP---SG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSS---S--SE-EEEET---TE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEEC---C--EE-EEEcC---Cc-eEEcCEEEECCChh
Confidence 578999999999999999999999999876 4 45 66552 44 78999999999874
No 60
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.17 E-value=0.019 Score=51.00 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|+++..++ + ++++|++....+|+ ++.||.||.|...+. +.+.+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED---G--YVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC---C--EEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 477888999999999999999999999876 5 78888775321565 789999999988754 555554
No 61
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.14 E-value=0.014 Score=54.05 Aligned_cols=59 Identities=14% Similarity=0.077 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+.+.|.+.+++.|++|+++++|++|..+++ | +++||.+....+|+ .+.||.||.|+.-
T Consensus 144 ~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~--g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 144 ALLHTLYQQNLKNHTTIFSEWYALDLVKNQD--G--AVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--CEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCcEEEEEEECCC--C--EEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 5788999999999999999999999998632 5 79998865323554 5789999998875
No 62
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.08 E-value=0.012 Score=47.58 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.+.+.+++. |++++ +++|++|..++ + ++++|.+. +|+++.||.||.|.....
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~---~--~v~~v~~~---~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG---N--RVVGVRTW---EGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEET---TSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC---C--EEEEEEEC---CCCEEECCEEEECCCCCh
Confidence 5678888999997 99999 67999999876 5 67788773 777899999999988743
No 63
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.07 E-value=0.016 Score=49.59 Aligned_cols=55 Identities=11% Similarity=-0.031 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++|+.+++|++|..++ + + ..|.+. +| .+.||.||.|+....
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~--~-~~v~~~---~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD---D--G-VTIETA---DG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--S-EEEEES---SC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC---C--E-EEEEEC---CC-eEEcCEEEEcCCccH
Confidence 578899999999999999999999999876 3 3 345542 55 589999999998754
No 64
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.05 E-value=0.012 Score=53.07 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=46.7
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+++++|.||.++..
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~~---~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNTD--G---SKHVTFE---SGKTLDVDVVMMAIGR 290 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--c---eEEEEEC---CCcEEEcCEEEECCCC
Confidence 345788899999999999999999999987652 2 3466663 7888999999999875
No 65
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.05 E-value=0.017 Score=49.67 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.++++|++|+.+++|++|..++ + + ..|.+ ++.++.||.||.|+....
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~-~~v~~----~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISP---D--S-VKIET----ANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--C-EEEEE----TTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecC---C--e-EEEEe----CCCEEEeCEEEEecCccH
Confidence 678899999999999999999999999876 3 2 34544 444789999999998753
No 66
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.03 E-value=0.016 Score=51.51 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=46.0
Q ss_pred CcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+...+.+.+.+.++++|++|+++++|++|..++ + ++ .|.+. +| +++||.||.++...
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v-~v~~~---~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA---N--GI-VLETS---EQ-EISCDSGIFALNLH 243 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS---S--CE-EEEES---SC-EEEESEEEECSCCB
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC---C--eE-EEEEC---CC-EEEeCEEEECcCCC
Confidence 344678899999999999999999999998765 4 45 66652 44 89999999998853
No 67
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.03 E-value=0.013 Score=52.83 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=46.1
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+..+.+.+.+.++++|++|+++++|++|..++ + ++ .|++. +|++++||.||.++..
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~---~--~~-~v~l~---dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS---G--KL-LIKLK---DGRKVETDHIVAAVGL 280 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEET---T--EE-EEEET---TSCEEEESEEEECCCE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC---C--eE-EEEEC---CCCEEECCEEEECCCC
Confidence 34577888999999999999999999998764 3 33 57663 7889999999999875
No 68
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.01 E-value=0.014 Score=53.00 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEE--EEEEEecCCCe-EEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVK--GLAMSKATDKK-VVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~--~v~~~~~~~g~-~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|..+++ + ++. .|.+ .+|+ +++||.||.++..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~--~--~v~~~~v~~---~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDAN--G--RVQAVVAMT---PNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTT--S--BEEEEEEEE---TTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC--C--ceEEEEEEE---CCCcEEEEcCEEEECcCC
Confidence 45788899999999999999999999987652 4 553 3444 3676 8999999999874
No 69
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.98 E-value=0.019 Score=53.90 Aligned_cols=58 Identities=9% Similarity=-0.022 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+...|.+.+++.|++|+.+++|++|..++ | ++.||.+....+|+ .+.||.||+|+.-
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD---G--KCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC---C--EEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 578899999999999999999999999875 6 89998765323565 4789999988774
No 70
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.97 E-value=0.018 Score=51.94 Aligned_cols=59 Identities=17% Similarity=0.005 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~~ 112 (231)
.+...+.+.++++|++|+.+++|++|..++ ++++|.+.+..+|+ ++.||.||.|+.+..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 578899999999999999999999999875 46788774322464 789999999988753
No 71
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.96 E-value=0.015 Score=50.48 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.+++.|++|+++++|++|..++ + ...|.+. +|+++++|.||.++..
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~---~~~v~~~---~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG---E---GLEAHLS---DGEVIPCDLVVSAVGL 241 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET---T---EEEEEET---TSCEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC---C---EEEEEEC---CCCEEECCEEEECcCC
Confidence 34578899999999999999999999998765 2 2456663 7888999999999875
No 72
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.96 E-value=0.014 Score=52.61 Aligned_cols=57 Identities=9% Similarity=0.066 Sum_probs=46.5
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+++++|.||.++..
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~~---~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNAD--G---TRHVVFE---SGAEADYDVVMLAIGR 286 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C---EEEEEEC---CCcEEEcCEEEEccCC
Confidence 345788899999999999999999999987652 2 3456663 7778999999999875
No 73
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.92 E-value=0.015 Score=52.16 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=46.7
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.+++.|++|+++++|++|..++ + ++ .|++. +|+++++|.||.++..
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~~~---~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE---N--CY-NVVLT---NGQTICADRVMLATGR 286 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS---S--SE-EEEET---TSCEEEESEEEECCCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC---C--EE-EEEEC---CCcEEEcCEEEEeeCC
Confidence 34578889999999999999999999998876 3 33 56663 7888999999999885
No 74
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.014 Score=52.32 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=46.7
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-eEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + ++..|.+. +| +.+++|.||.++..
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~~~~v~~~---~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNVE--T--DKLKIHMN---DSKSIDDVDELIWTIGR 283 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC---C--CCEEEEET---TSCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC--C--cEEEEEEC---CCcEEEEcCEEEECCCC
Confidence 346788899999999999999999999987642 3 34567663 77 78999999999885
No 75
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.88 E-value=0.019 Score=49.68 Aligned_cols=54 Identities=17% Similarity=0.144 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++.|++|+++++|++|..++ + ++ .|.+ ++.++.||.||.|....
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~t----~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA---D--GV-SVTT----DRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--EE-EEEE----SSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC---C--eE-EEEE----CCCEEEcCEEEEcCCcC
Confidence 577889999999999999999999999876 3 33 3443 34478999999998764
No 76
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.87 E-value=0.016 Score=44.49 Aligned_cols=54 Identities=7% Similarity=-0.024 Sum_probs=43.5
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
..+.+.+.+.+++.|++++++ +|++|..+++ + ..|.+. +| ++++|.||.|+...
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~--~----~~v~~~---~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGG--V----FEVETE---EG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS--S----EEEECS---SC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC--E----EEEEEC---CC-EEEECEEEECCCCC
Confidence 467889999999999999999 9999998752 2 345542 56 78999999998864
No 77
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.82 E-value=0.021 Score=47.81 Aligned_cols=57 Identities=11% Similarity=0.015 Sum_probs=44.7
Q ss_pred HHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEec--CCCeEEecCEEEEcCChh
Q 026885 50 SGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (231)
Q Consensus 50 ~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~--~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.+.+.+. |++|+++++|++|..++ + ++.+|++... ++++++++|.||.++...
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDG---K--LLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEccc---C--cEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 46677777776 99999999999999876 4 6888888631 124678999999998864
No 78
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.79 E-value=0.022 Score=51.26 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=46.1
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
...+.+.+.+.++++|++|+++++|++|..++ + ++ .+.+ .+|+++++|.||.++...
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---~--~v-~v~~---~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG---A--GV-LVTM---TDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS---S--SE-EEEE---TTSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--EE-EEEE---CCCcEEEcCEEEECCCCC
Confidence 34578899999999999999999999998765 3 33 4544 378889999999998864
No 79
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.78 E-value=0.026 Score=51.07 Aligned_cols=64 Identities=14% Similarity=0.184 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh-HhhhC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~-~~~Ll 117 (231)
.+.+.|.+.+++.|++|+++++|++|..++ + ++.+|++.. .+| .+++||.||.|...+. +.+.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~---~--~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG---E--RAVGVRYRN-TEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET---T--EEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC---C--EEEEEEEEe-CCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 567889999999999999999999999976 5 788887752 246 3789999999988753 44444
No 80
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.75 E-value=0.016 Score=51.60 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEE-EEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA-MSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~-~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + +..|. +. +|+ +++|.||.++..
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~~---~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD--G---RRVATTMK---HGE-IVADQVMLALGR 266 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---CEEEEESS---SCE-EEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--C---EEEEEEcC---CCe-EEeCEEEEeeCc
Confidence 346788999999999999999999999998752 3 34566 53 777 999999999885
No 81
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.74 E-value=0.021 Score=53.30 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+...|.+.+++.|++|+.+++|++|..++ | ++.||.+....+|+ .+.|+.||+|+.-
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN---G--ECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 678899999999999999999999999875 6 89999875323564 6789999998774
No 82
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.74 E-value=0.025 Score=47.37 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=44.4
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChh
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~ 111 (231)
.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+....+|+ ++++|.||.++...
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGDG---K--KVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecCC---c--eEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 3567888889999999999999998765 4 57788775322454 68999999998753
No 83
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.67 E-value=0.024 Score=51.79 Aligned_cols=57 Identities=19% Similarity=0.355 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++. |++|+++ +|++|..+++ | ++.+|.+. +|+++.||.||.|.....
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~--g--~~~~v~~~---~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN--G--NIESVRTA---TGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT--S--CEEEEEET---TSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC--C--CEEEEEEC---CCCEEECCEEEECCCCch
Confidence 5788899999998 9999999 9999998653 5 67788774 788899999999988754
No 84
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.66 E-value=0.031 Score=50.32 Aligned_cols=57 Identities=14% Similarity=0.324 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++++.+ +|++|..+++ | ++.+|++. +|++++||.||.|...+.
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--~--~~~~v~~~---~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDER--G--WISGVHTK---QHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEES---SSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC--C--CEEEEEEC---CCCEEEcCEEEECCCcch
Confidence 57788999999999999999 9999998653 5 67788774 777899999999988764
No 85
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.65 E-value=0.022 Score=50.40 Aligned_cols=56 Identities=14% Similarity=0.061 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
..+.+.|.+.+++.|++|+++++|++|..++ + . ..|.+. +| .+.||.||.|.....
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~~~---~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTA---S--G-FRVTTS---AG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEET---TE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEEC---Cc-EEEeeEEEECCCCcc
Confidence 3688999999999999999999999999876 3 2 456552 44 889999999987643
No 86
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.55 E-value=0.024 Score=50.40 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+++++|.||.++..
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 207 DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD--G---SLTLELE---DGRSETVDCLIWAIGR 263 (450)
T ss_dssp CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT--S---CEEEEET---TSCEEEESEEEECSCE
T ss_pred hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--c---EEEEEEC---CCcEEEcCEEEECCCC
Confidence 345788899999999999999999999987652 2 2456663 7888999999999864
No 87
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.54 E-value=0.04 Score=50.87 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCC---------CeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATD---------KKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~---~~~---------g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++|+++++|++|..+++ | ++++|.+.+ ..+ |.++.||.||.|...+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~--g--~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED--G--SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT--S--SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC--C--CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 5677889999999999999999999998763 5 788887641 012 36789999999988753
No 88
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.53 E-value=0.025 Score=50.89 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+ + ++..+.+ +|+++++|.||.++..
T Consensus 235 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~----~--~v~~v~~----~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 235 DRDLTDLMAKNMEEHGIQLAFGETVKEVAGN----G--KVEKIIT----DKNEYDVDMVILAVGF 289 (490)
T ss_dssp CHHHHHHHHHHHHTTTCEEEETCCEEEEECS----S--SCCEEEE----SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC----C--cEEEEEE----CCcEEECCEEEECCCC
Confidence 3456788999999999999999999999863 3 4556655 6788999999999875
No 89
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.50 E-value=0.036 Score=45.87 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=42.8
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~ 111 (231)
+.+.+.+++.|++|+++++|++|..++ + ++.+|++. ..+|+ ++++|.||.++...
T Consensus 187 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 187 STVEKVKKNEKIELITSASVDEVYGDK---M--GVAGVKVK-LKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHHCTTEEEECSCEEEEEEEET---T--EEEEEEEE-CTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHHhcCCeEEEeCcEEEEEEcCC---C--cEEEEEEE-cCCCCeEEeecCeEEEEEcCC
Confidence 344556678999999999999998776 5 78888775 23564 78899999998853
No 90
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.48 E-value=0.027 Score=49.01 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChh-hHhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP-GIKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~-~~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|++|..+++ + .+..+.. .+|+ ++.||.||.|.... .+.+++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~v~v~~---~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT--D--SVTTIED---INGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT--E--EEEEEEE---TTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--E--EEEEEEc---CCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 5678889999999999999999999998862 3 2334433 3676 68999999998875 3555554
No 91
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.41 E-value=0.024 Score=49.20 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEE-EEEEEecCCCeEEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVK-GLAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~-~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++. |++|+++++|++|+.++ + +++ .|.+. +|++++||.||.|...+. +.+.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~g~v~~~---~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE---R--HAIDQVRLN---DGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT---T--SCEEEEEET---TSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC---C--ceEEEEEEC---CCCEEECCEEEECCCCChHHHHHhC
Confidence 5678888999888 99999999999999876 3 343 56653 777899999999988754 555553
No 92
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.38 E-value=0.05 Score=48.72 Aligned_cols=56 Identities=16% Similarity=0.084 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
...+.+.+.+.+++.|++|+++++|++|..++ ++..+.+ +++++++|.||.++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~------~v~~v~~----~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGNE------RVEAVET----DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS------BEEEEEE----TTEEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC------cEEEEEE----CCCEEEcCEEEECcCCC
Confidence 34577889999999999999999999997643 5666655 56689999999998853
No 93
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.38 E-value=0.048 Score=47.91 Aligned_cols=57 Identities=12% Similarity=0.041 Sum_probs=45.0
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEec----cCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~----~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
...+.+.|.+.+++.|++|+++++|++|..+ + + + ..|.+ ++.++.||.||.|+....
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~---~--~-~~v~~----~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK---V--R-FVLQV----NSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS---C--C-EEEEE----TTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC---C--e-EEEEE----CCCEEECCEEEECCCCcc
Confidence 4468899999999999999999999999976 4 2 2 34554 334789999999986543
No 94
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.36 E-value=0.037 Score=51.38 Aligned_cols=59 Identities=17% Similarity=0.064 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~ 111 (231)
.+...|.+.+++.| ++|+++++|++|..++ + ++.||.+....+|+ .+.||.||.|+...
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDD---G--HVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 57888999999999 9999999999999876 5 88898664323676 68899999998753
No 95
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.35 E-value=0.043 Score=48.90 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=44.9
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + ...|.+ +++++++|.||.++..
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~---~~~v~~----~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD---G---EFVLTT----THGELRADKLLVATGR 269 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET---T---EEEEEE----TTEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---C---EEEEEE----CCcEEEcCEEEECCCC
Confidence 34578889999999999999999999998764 3 345655 5678999999999875
No 96
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.31 E-value=0.069 Score=44.80 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~ 111 (231)
...+.+.+.+++.|++|+++++|++|..++ ++.+|.+....+| +++++|.||.++...
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDE------RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCC------CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 456778888888899999999999998743 5667877532245 678999999998853
No 97
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.29 E-value=0.038 Score=49.85 Aligned_cols=57 Identities=11% Similarity=0.011 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeE-EecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV-VQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~-~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+. +|+. +++|.||.++..
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVSD--K---NLSIHLS---DGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESST--T---CEEEEET---TSCEEEEESEEEECCCB
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC--c---eEEEEEC---CCcEEEECCEEEECCCC
Confidence 346788899999999999999999999987642 3 2456663 7777 899999999885
No 98
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.25 E-value=0.054 Score=44.94 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=42.7
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
+.+.+.+++ .|++|+++++|++|..++ + ++.+|++....+| .++++|.||.++..
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCC---C--cEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 456777887 699999999999998765 4 6778887642235 36889999999875
No 99
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.23 E-value=0.042 Score=46.85 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~ 111 (231)
.+.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+.. .+| +.+++|.||.++...
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN---G--VLTRVHLRS-SDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET---T--EEEEEEEEE-TTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC---C--ceEEEEEEe-cCCCeEEEeCCEEEECCCCC
Confidence 466778888899999999999999998875 4 677887741 255 678999999998753
No 100
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.22 E-value=0.036 Score=49.11 Aligned_cols=54 Identities=17% Similarity=0.080 Sum_probs=44.5
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|++|+++++|++|..++ ++..+.+ +|+++++|.||.++..
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~------~v~~v~~----~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGDG------RVQKVVT----DKNAYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECSS------BCCEEEE----SSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEccC------cEEEEEE----CCCEEECCEEEECcCC
Confidence 4577889999999999999999999998653 4555655 5678999999999875
No 101
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.19 E-value=0.036 Score=49.18 Aligned_cols=56 Identities=11% Similarity=0.127 Sum_probs=45.2
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
..+.+.+.+.++++|++|+++++|++|..++ + + ..+.+ .+|+++++|.||.++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-v~v~~---~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEA---K--G-ARVEL---EGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEE---CCCeEEEcCEEEECcCCC
Confidence 3578889999999999999999999998765 3 2 34544 268889999999998753
No 102
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.17 E-value=0.05 Score=48.57 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe-EEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~-~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + . ..|.+. +|+ ++++|.||.++..
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~---~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA---Q--G-TTLVAQ---DGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET---T--E-EEEEET---TCCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEEe---CCcEEEEcCEEEECCCC
Confidence 34577888999999999999999999998765 2 2 456563 787 8999999999874
No 103
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.12 E-value=0.029 Score=48.97 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=43.3
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++++++++|++|.-+ +|++. +|+++++|.||.+++.
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~----------~v~~~---~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIREH----------EIVDE---KGNTIPADITILLPPY 268 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECSS----------EEEET---TSCEEECSEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECCC----------eEEEC---CCCEEeeeEEEECCCC
Confidence 3467888999999999999999999999532 26664 8889999999999875
No 104
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.10 E-value=0.046 Score=47.88 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=43.1
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|. + + +|++. +|+++++|.||.++..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~---~-----~v~~~---~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--D---G-----VVLLD---DGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--T---T-----EEEET---TSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--C---C-----EEEEC---CCCEEEcCEEEECcCC
Confidence 4577889999999999999999999998 3 3 36563 7889999999999875
No 105
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.08 E-value=0.045 Score=50.30 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=44.8
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|..++ + +|.+. +|+++++|.||.++..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~-----~v~~~---~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENG---A-----VVRLK---SGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG---T-----EEEET---TSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCC---C-----EEEEC---CCCEEEcCEEEEccCC
Confidence 4678889999999999999999999997654 2 46663 7889999999999885
No 106
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.02 E-value=0.075 Score=47.34 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-eEEecCEEEEcCChh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP 111 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-~~~~aD~vV~a~p~~ 111 (231)
...+.+.+.+.+++.|++|+++++|++|..++ + + ..+.+.+ .+| +.+++|.||.++...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN---K--Q-VTVKFVD-AEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS---S--C-EEEEEES-SSEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC---C--E-EEEEEEe-CCCcEEEECCEEEEeeCCc
Confidence 34678889999999999999999999998876 3 2 3455541 123 678999999998863
No 107
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=95.01 E-value=0.058 Score=49.02 Aligned_cols=57 Identities=11% Similarity=0.370 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++++.+ +|++|..+++ | .+.+|.+. +|+++.||.||.|...+.
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--g--~~~~v~~~---~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNR--G--YISNLLTK---EGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEET---TSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC--C--cEEEEEEC---CCcEEEeCEEEECCCCch
Confidence 57788999999999999999 8999998653 5 56777763 677899999999988764
No 108
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.97 E-value=0.078 Score=47.26 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~--~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+.++++|++|+++++|++|..++ + +...+.+.. .++++++++|.||.++..
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKS---D--GKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECT---T--SCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC---C--ceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 34577889999999999999999999998765 2 223444321 236778999999999875
No 109
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.91 E-value=0.073 Score=44.20 Aligned_cols=58 Identities=14% Similarity=0.226 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEec------CC-----CeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA------TD-----KKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~------~~-----g~~~~aD~vV~a~p~ 110 (231)
.+...+.+.+.+ .|++|+++++|++|..++ + ++.+|.+... .+ ...++||.||.|+..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~---~--~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG---N--RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET---T--EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC---C--eEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 456677777766 699999999999999876 5 7888876410 02 267899999999874
No 110
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=94.80 E-value=0.087 Score=45.41 Aligned_cols=64 Identities=8% Similarity=0.046 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|++|..+++ + ...|.+.. +|+ ++.||.||.|...+. +.+.+.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~--~---~~~v~~~~--~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG--E---RPYVTFER--DGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS--S---SCEEEEEE--TTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC--C---ceEEEEec--CCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4677888888889999999999999987642 2 23566521 776 789999999988754 556664
No 111
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.67 E-value=0.089 Score=48.71 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh-Hhhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRL 116 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~-~~~L 116 (231)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++++|.+.. +| +++.||.||.|..... +.+.
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~---g--~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S~lr~~ 193 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD---P--DRVVLTVRR--GGESVTVESDFVIDAGGSGGPISRK 193 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS---T--TCEEEEEEE--TTEEEEEEESEEEECCGGGCHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC---C--CEEEEEEec--CCceEEEEcCEEEECCCCcchhHHH
Confidence 567888999999999999999999999875 3 567887752 55 5789999999988764 4443
No 112
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.59 E-value=0.048 Score=48.86 Aligned_cols=59 Identities=12% Similarity=-0.055 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-cCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~-~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + ...|.+.+ .+.|+++++|.||.++..
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~---~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE---D---GVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET---T---EEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC---C---eEEEEEeccCCCceEEEcCEEEECcCC
Confidence 34578889999999999999999999998765 2 24566641 011677899999999885
No 113
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.55 E-value=0.025 Score=49.42 Aligned_cols=54 Identities=9% Similarity=0.087 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHHCCcEEEcCceee---------EEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCR---------EILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~---------~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++.|++|+.+++|+ +|..++ + ++ +|.+ ++.++.||.||.|....
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~---~--~v-~v~~----~~g~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN---T--HQ-IVVH----ETRQIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------------CB----CCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC---C--eE-EEEE----CCcEEECCEEEECCCcc
Confidence 478899999999999999999999 888765 3 44 5644 33478999999998875
No 114
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.54 E-value=0.087 Score=46.68 Aligned_cols=60 Identities=12% Similarity=0.072 Sum_probs=45.2
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
...+.+.+.+.++++|++|+++++|++|..++ + + ..+.+...++++.+++|.||.++...
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEERE---D--G-VTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--E-EEEEEEETTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEEEeCCceeEEEcCEEEECcCCC
Confidence 34577889999999999999999999998765 3 2 33444322245678999999998853
No 115
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.51 E-value=0.1 Score=47.21 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-H-hhhCC
Q 026885 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~-~~Ll~ 118 (231)
.+.+.|.+.+++ .|++++.+ +|++|..+++ | .+.+|.+. +|+++.||.||.|...+. + .+.+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~--g--~~~~v~~~---~g~~i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH--G--DIEKLITK---QNGEISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT--S--CEEEEEES---SSCEEECSEEEECSGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC--C--cEEEEEEC---CCCEEEcCEEEECCCcchHHHHHHhC
Confidence 567888899998 89999999 6999998753 5 56677764 666799999999988764 3 34454
No 116
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.48 E-value=0.095 Score=46.72 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEe--ccCCCCcceEEEEEEEe--cCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~--~~~~~~~~~v~~v~~~~--~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|.. ++ +...+.+.. +++++.+++|.||.++..
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK------NVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT------TEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC------CeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 45788899999999999999999999987 33 234565542 123567899999999875
No 117
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.43 E-value=0.14 Score=42.21 Aligned_cols=53 Identities=15% Similarity=0.116 Sum_probs=39.4
Q ss_pred HHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 52 PIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+.+.+.+ .|++++++++|++|..++ ++.+|++.+..+|+ .+++|.||.++..
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGDK------VVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEeccC------ceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 44455554 599999999999998764 56778876322365 7899999999875
No 118
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.42 E-value=0.13 Score=45.97 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.+++.|++|+++++|++|..++ + . ..+.+....+| +++++|.||.++..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~---~--~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG---D--G-AKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--E-EEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC---C--E-EEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 34578889999999999999999999998875 3 2 34555421124 68899999999875
No 119
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.41 E-value=0.058 Score=48.76 Aligned_cols=58 Identities=12% Similarity=0.060 Sum_probs=42.5
Q ss_pred HHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-----eEEecCEEEEcCChh
Q 026885 50 SGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (231)
Q Consensus 50 ~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-----~~~~aD~vV~a~p~~ 111 (231)
...+.+.++++| ++|+++++|++|.++++ ++ +++||++.. .+| .++.|+.||+++..-
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~-g~--~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKD-GG--YALTVEQKD-TDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTT-SS--EEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CC--EEEEEEEeC-CCCccceeEEEeeCEEEEccCCC
Confidence 344445556676 89999999999999852 13 799998752 145 367899999998864
No 120
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=94.40 E-value=0.071 Score=48.27 Aligned_cols=57 Identities=12% Similarity=0.083 Sum_probs=42.2
Q ss_pred CcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC----eEEecCEEEEcCCh
Q 026885 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK----KVVQADAYVAACDV 110 (231)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g----~~~~aD~vV~a~p~ 110 (231)
+++.+.+.+.+.|+++|++|++|++|+++.-+ + ....+.. .+| +++++|.||.++..
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~----~--~~~~~~~---~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK----Q--LLAKTKH---EDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSS----E--EEEEEEC---TTSCEEEEEEECSEEEECCCE
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCC----c--eEEEEEe---cCcccceeeeccCEEEEccCC
Confidence 45678889999999999999999999999543 2 2222222 244 46899999988763
No 121
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.33 E-value=0.077 Score=49.59 Aligned_cols=55 Identities=11% Similarity=0.018 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++ .|++| ++++|+.|..++ + ++++|.+. +|+.+.||.||.|+...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~---g--~V~GV~t~---dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN---N--QVVGVRTN---LGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS---S--BEEEEEET---TSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC---C--EEEEEEEC---CCcEEEeCEEEEccCCC
Confidence 478889999998 59999 688999999886 5 78899874 78889999999998854
No 122
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.30 E-value=0.17 Score=41.90 Aligned_cols=56 Identities=11% Similarity=0.062 Sum_probs=41.9
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChh
Q 026885 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (231)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~ 111 (231)
+.+.+.+.+ .|++|+++++|++|..++ + ++.+|.+....+|+ ++++|.||.++...
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGDA---S--GVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECCC---C--cEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 456666664 799999999999998774 3 56778775322454 78999999998753
No 123
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.20 E-value=0.051 Score=48.96 Aligned_cols=60 Identities=10% Similarity=0.040 Sum_probs=45.8
Q ss_pred eeeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+..+++. ++.+.++++|++|+++++|++|.-++ ++.+|.+ .+|+++++|.||.++..
T Consensus 252 ~vvViGgG~~-----gle~~l~~~GV~v~~~~~v~~i~~~~------~v~~v~~---~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 252 KVAVTGSKAD-----EVIQELERWGIDYVHIPNVKRVEGNE------KVERVID---MNNHEYKVDALIFADGR 311 (493)
T ss_dssp EEEEESTTHH-----HHHHHHHHHTCEEEECSSEEEEECSS------SCCEEEE---TTCCEEECSEEEECCCE
T ss_pred EEEEECCCHH-----HHHHHHHhCCcEEEeCCeeEEEecCC------ceEEEEe---CCCeEEEeCEEEECCCc
Confidence 4455555542 34488899999999999999998543 4566766 37889999999999885
No 124
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.19 E-value=0.12 Score=45.92 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=44.1
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..++ + + ..+.+. .+| +++++|.||.++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~--~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 211 DADVSKEIEKQFKKLGVTILTATKVESIADGG---S--Q-VTVTVT--KDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCEEEEEEECS---S--C-EEEEEE--SSSCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC---C--e-EEEEEE--cCCceEEEEcCEEEECCCC
Confidence 34577889999999999999999999998765 3 2 335443 144 67899999999875
No 125
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.14 E-value=0.17 Score=42.19 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=40.3
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
+.+.+.+.+ .|++|+++++|++|..++ ++.+|.+....+|+ ++++|.||.++..
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~------~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGAD------SVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccCC------cEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 455566654 699999999999998653 57788775322454 7899999999875
No 126
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.11 E-value=0.13 Score=45.66 Aligned_cols=60 Identities=12% Similarity=0.217 Sum_probs=45.2
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCCeEEecCEEEEcCChh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~--~~~g~~~~aD~vV~a~p~~ 111 (231)
...+.+.+.+.+++.|++|+++++|++|..++ + + ..+.+.. .++++++++|.||.++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG---D--G-VKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS---S--S-EEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC---C--e-EEEEEEecCCCcceEEECCEEEECCCCC
Confidence 34577889999999999999999999998765 2 2 3454432 1234788999999998753
No 127
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.08 E-value=0.09 Score=43.75 Aligned_cols=55 Identities=7% Similarity=0.111 Sum_probs=42.0
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEec--CCCeEEecCEEEEcCChh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~--~~g~~~~aD~vV~a~p~~ 111 (231)
+...+.+++.|++++++++|++|..++ ++.+|.+.+. ++++++++|.||.++...
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 455677899999999999999998765 3456777632 125678999999998753
No 128
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.05 E-value=0.19 Score=44.83 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=45.1
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC----CeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD----KKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~----g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|..+++ + ....+.+.+..+ |+.+++|.||.++..
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS--G--LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS--S--EEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--cEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 345788899999999999999999999987652 3 233455531111 267899999999875
No 129
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.03 E-value=0.14 Score=45.57 Aligned_cols=58 Identities=9% Similarity=0.062 Sum_probs=43.4
Q ss_pred cchhHHHHHHHH-HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYI-TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l-~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.+ +++|++|+++++|++|..++ + + ..+.+.. .+| +.+++|.||.++..
T Consensus 214 d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 214 DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG---D--S-VSLEVEG-KNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS---S--S-EEEEEEC-C---EEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC---C--e-EEEEEEc-CCCceEEEECCEEEECCCc
Confidence 345678899999 99999999999999998765 2 2 3454431 134 67899999999875
No 130
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.03 E-value=0.1 Score=46.63 Aligned_cols=59 Identities=7% Similarity=-0.076 Sum_probs=44.7
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|..+++ + + ..|.+.++.+| +++++|.||.++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~-~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDD--G--K-LLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTT--S--C-EEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C--c-EEEEEecCCCCceeEEEcCEEEECccc
Confidence 45778899999999999999999999987652 3 3 34666532222 37889999999875
No 131
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.01 E-value=0.082 Score=47.85 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=41.4
Q ss_pred HHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-----eEEecCEEEEcCChh
Q 026885 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (231)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-----~~~~aD~vV~a~p~~ 111 (231)
..+.+..+++| ++|+++++|++|.++++ | .+++||++.. .+| .++.|+.||+++..-
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~--g-~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATG--S-GYSVTMEQID-EQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSS--S-SEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCC--C-CEEEEEEEeC-CCCcccccEEEEeCEEEEccCcc
Confidence 34444445565 99999999999999862 3 1699998752 134 367899999998864
No 132
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.89 E-value=0.13 Score=46.73 Aligned_cols=56 Identities=20% Similarity=0.323 Sum_probs=44.1
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEec------------------cCCCCcceEEEEEEEecCCCeEEecCEEEEcC
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYD------------------KAANAETYVKGLAMSKATDKKVVQADAYVAAC 108 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~------------------~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~ 108 (231)
..+.+.+.+.+++.|++|+++++|++|..+ .+ + ++ .+.+ .+|+++++|.||.++
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~v~~---~~g~~i~~D~vi~a~ 263 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK--G--HL-SLTL---SNGELLETDLLIMAI 263 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT--C--EE-EEEE---TTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC--C--cE-EEEE---cCCCEEEcCEEEECc
Confidence 456788889999999999999999999873 21 3 33 3444 378899999999998
Q ss_pred Ch
Q 026885 109 DV 110 (231)
Q Consensus 109 p~ 110 (231)
..
T Consensus 264 G~ 265 (565)
T 3ntd_A 264 GV 265 (565)
T ss_dssp CE
T ss_pred CC
Confidence 75
No 133
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.86 E-value=0.18 Score=44.92 Aligned_cols=56 Identities=13% Similarity=0.046 Sum_probs=43.9
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC--Ce--EEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD--KK--VVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~--g~--~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|..++ + + ..|.+.. + |+ ++++|.||.++..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~--~-~~v~~~~--~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKK---D--G-LHVRLEP--AEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--E-EEEEEEE--TTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC---C--E-EEEEEee--cCCCceeEEEcCEEEECCCc
Confidence 4577888999999999999999999998765 3 2 3455531 3 65 8899999999864
No 134
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=93.85 E-value=0.11 Score=43.51 Aligned_cols=56 Identities=9% Similarity=-0.069 Sum_probs=43.8
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+.+.+.+.+++++.|++++++++|++|..++ + ++.+|.+ .+| ++.+|.||.|+...
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~--~~~~v~~---~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG---E--RLRVVAR---DGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET---T--EEEEEET---TSC-EEEEEEEEECCCSG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC---C--cEEEEEe---CCC-EEEeCEEEECCCCC
Confidence 3577888899999999999999999999876 3 3332544 244 88999999998753
No 135
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.83 E-value=0.13 Score=44.13 Aligned_cols=58 Identities=16% Similarity=0.091 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-HhhhC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~Ll 117 (231)
.+.+.|.+.+++.|++|+++++|++|.. + . .|++. +|++++||.||.|...+. +.+.+
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~------~--~v~~~---~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V------G--RLTLQ---TGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T------T--EEEET---TSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C------C--EEEEC---CCCEEEcCEEEECCCccHHHHHHh
Confidence 5678899999999999999999999976 3 2 45553 788899999999988753 55544
No 136
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.83 E-value=0.1 Score=46.74 Aligned_cols=56 Identities=20% Similarity=0.070 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++.|++|+.+++| +|..++ + ++.|+.+.. ++..+.||.||.|+...
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~---~--~v~Gv~v~~--~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKD---G--KVTGFVTEK--RGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEET---T--EEEEEEETT--TEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeC---C--EEEEEEEEe--CCCeEEeeeEEECCCCC
Confidence 57788999998899999999999 998876 5 788887631 23357799999998754
No 137
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.82 E-value=0.15 Score=43.35 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-Hhhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~L 116 (231)
.+-+.|.+..++.|++++++++|+.+..++ + ++.++.....+++.+++||.||-|-..+. +.+.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~---~--~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~ 167 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc---c--eeeeeeecccccceEEEEeEEEeCCccccHHHHH
Confidence 456778888899999999999999999887 5 77777655322334678999999977653 4443
No 138
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.76 E-value=0.13 Score=45.61 Aligned_cols=51 Identities=14% Similarity=0.166 Sum_probs=42.9
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++++++++|+++. + . .+.+. +|+++++|.||.++..
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~---~-----~v~~~---~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN--G---N-----EITFK---SGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE--T---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec--C---C-----eeeec---CCeEEeeeeEEEEece
Confidence 4678999999999999999999999884 2 2 35564 8999999999999874
No 139
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=93.73 E-value=0.21 Score=44.62 Aligned_cols=59 Identities=12% Similarity=-0.006 Sum_probs=44.3
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|...++ + + ..+.+....+|+ ++++|.||.++..
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~--~--~-~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT--N--Q-LQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--C-EEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--c-EEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 45788899999999999999999999987542 3 2 345554322355 4789999999875
No 140
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.72 E-value=0.096 Score=49.07 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++ .|++| ++++|+.|..++ + ++++|.+. +|+.+.||.||.|+...
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~---g--~V~GV~t~---dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN---D--RVVGAVTQ---MGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS---S--BEEEEEET---TSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC---C--EEEEEEEC---CCCEEECCEEEEcCCCC
Confidence 467888999998 69999 678999999876 5 78899874 78889999999998764
No 141
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=93.62 E-value=0.1 Score=45.93 Aligned_cols=52 Identities=8% Similarity=0.023 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-cCCCeEEecCEEEEcCCh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~-~~~g~~~~aD~vV~a~p~ 110 (231)
+.+.+.+.++++|++|++|++|++|+-+ ++++.. .++++++++|.||.+.+.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~----------~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD----------KVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS----------EEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC----------eEEEEecCCCceEEeeeEEEECCCC
Confidence 5778899999999999999999999532 244441 113778999999998653
No 142
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.46 E-value=0.19 Score=45.39 Aligned_cols=67 Identities=12% Similarity=0.052 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEE--EEEEecCCCeEEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKG--LAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~--v~~~~~~~g~~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|++|+.+++ + ++.+ +++.++..++++.||.||.|...+. +.+.+.
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDD--D--AGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECG--G--GCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCC--C--ccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 5778899999999999999999999998762 2 3333 3343111126889999999988764 556653
No 143
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.44 E-value=0.11 Score=47.37 Aligned_cols=62 Identities=13% Similarity=0.044 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCc----ceEEEEEEEecCCCe--EEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAE----TYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~----~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++ .|++|+.+++|++|..+++ +. +++.||.+....+|+ ++.||.||.|+.-.
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~--g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK--IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG--TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC--CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 466778888888 7999999999999998431 20 058888775322565 68899999998753
No 144
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.40 E-value=0.095 Score=38.87 Aligned_cols=53 Identities=9% Similarity=0.021 Sum_probs=39.8
Q ss_pred CeEEecCEEEEcCChhhHhhhC--CCcccCchHHHHhhCCCCCcEEEEEEEecCccc
Q 026885 96 KKVVQADAYVAACDVPGIKRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (231)
Q Consensus 96 g~~~~aD~vV~a~p~~~~~~Ll--~~~~~~~~~~~~~~~l~~~~i~~v~L~~d~~~~ 150 (231)
.++++||+||+|+|+..++++- |. .+....+.+.++.+-+..-+.+.|++++.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~I~F~P~--LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW 57 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRFVKVTPP--FSYKKRRAVIETHYDQATKVLLEFSRRWW 57 (130)
T ss_dssp CEEEEESEEEECSCHHHHTTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCGG
T ss_pred ceEEEcCEEEEcCCHHHHhcCcCCCC--CCHHHHHHHHhCCCcceeEEEEEECCCCC
Confidence 3568899999999999988642 22 22233455778888889999999999875
No 145
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.29 E-value=0.23 Score=44.76 Aligned_cols=64 Identities=11% Similarity=0.105 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-eEEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-~~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|++|+.++ + .++ |++.++ +| ++++||.||.|-..+. +.+.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~--~v~-v~~~~~-~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG---A--GVT-VEVRGP-EGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET---T--EEE-EEEEET-TEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC---C--eEE-EEEEcC-CCCEEEEeCEEEECCCcchHHHHHcC
Confidence 567788888999999999999999999876 3 343 555421 12 2789999999988764 556653
No 146
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=93.19 E-value=0.26 Score=44.39 Aligned_cols=62 Identities=6% Similarity=0.082 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe---EEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~---~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|++|+.+++ .++ |++. +++ +++||.||.|-..+. +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-----~v~-v~~~---~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGD-----HVV-VEVE---GPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSS-----CEE-EEEE---CSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-----EEE-EEEE---cCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 5677888889999999999999999998863 343 5554 332 789999999988764 556663
No 147
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.06 E-value=0.13 Score=48.22 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.++++|++|+++++|++|..++ . .+.....++++++++|.||.++..
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---~-----~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGAGG---V-----TVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEETTE---E-----EEEETTTCCEEEEECSEEEEESCE
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEECCe---E-----EEEEccCCeEEEEECCEEEECCCC
Confidence 346788999999999999999999997543 1 222211235678999999999875
No 148
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.98 E-value=0.33 Score=40.46 Aligned_cols=58 Identities=9% Similarity=0.030 Sum_probs=41.3
Q ss_pred HHHH-HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChh
Q 026885 51 GPIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (231)
Q Consensus 51 ~~l~-~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~ 111 (231)
+.+. +.+++.|++|+++++|++|..+++ + .++.+|.+....+| +++++|.||.++...
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~--~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDGE--R-DVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSS--S-SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCCC--c-cceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 4454 445789999999999999987641 1 14667777532234 578999999998753
No 149
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.97 E-value=0.25 Score=46.04 Aligned_cols=61 Identities=21% Similarity=0.079 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHHC-Cc-EEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDK-GG-RFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg-~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+...+.+.+++. |+ +|+.+++|++|..+++..| ++.||......+|+ .+.|+.||.|+.-
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPN--AVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTT--BEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccc--eeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 4677888888888 99 9999999999998751002 78898753212454 6889999998764
No 150
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.85 E-value=0.18 Score=44.43 Aligned_cols=53 Identities=8% Similarity=0.003 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-cCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~-~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.++++|+++++|++|++|+-+ + +.+.. .++++++++|.+|.+++.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~~-------~---~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEPD-------K---VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECSS-------E---EEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeCC-------c---eEEEeeCCCceEeecceEEEeccC
Confidence 45567888999999999999999998532 1 33332 224568899999998874
No 151
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.59 E-value=0.13 Score=44.46 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=41.5
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|++|. . . +|.+. +|+ +++|.||.++..
T Consensus 182 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~---~-----~v~~~---~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 182 DEELSNMIKDMLEETGVKFFLNSELLEAN--E---E-----GVLTN---SGF-IEGKVKICAIGI 232 (367)
T ss_dssp CHHHHHHHHHHHHHTTEEEECSCCEEEEC--S---S-----EEEET---TEE-EECSCEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e---e-----EEEEC---CCE-EEcCEEEECcCC
Confidence 34567888999999999999999999996 3 2 36663 677 999999998874
No 152
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=92.50 E-value=0.16 Score=46.13 Aligned_cols=55 Identities=5% Similarity=0.012 Sum_probs=40.7
Q ss_pred HHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EE---ecCEEEEcCChh
Q 026885 52 PIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVP 111 (231)
Q Consensus 52 ~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~---~aD~vV~a~p~~ 111 (231)
.+.+.+++ .|++|++++.|++|..++ + +++||++....+|+ ++ .++.||+++...
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~---~--~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~ 260 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG---S--QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAF 260 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET---T--EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEecCCCceeEEEEEeCCEEEEcCChh
Confidence 34555555 589999999999999986 5 89999885311253 33 789999998864
No 153
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.47 E-value=0.18 Score=42.37 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=38.1
Q ss_pred HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChh
Q 026885 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (231)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~ 111 (231)
+.+++.|++++++++|++|..++ ++.+|.+....+| +.+++|.||.++...
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDT------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSS------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred HHhccCCcEEEeCceeEEEecCC------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 44577999999999999998654 4556776532233 678999999998753
No 154
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=92.38 E-value=0.22 Score=46.69 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHC--CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDK--GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~--Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+...|.+.+++. |++|+.++.|.+|..+++..| ++.||......+|+ .+.|++||+|+.-
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g--~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPN--RIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTT--BEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccc--eEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 5778889999888 999999999999999761003 79998764322443 5789999999773
No 155
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.26 E-value=0.38 Score=43.54 Aligned_cols=55 Identities=15% Similarity=0.107 Sum_probs=42.6
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
+.+.+.+++ .|++|+++++|++|.-++ + ++.++.+.+..+|+ .+.+|.||.++..
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECS---S--SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCC---C--cEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 456777887 599999999999998765 4 68888876422353 6889999999774
No 156
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.08 E-value=0.28 Score=41.59 Aligned_cols=56 Identities=9% Similarity=-0.038 Sum_probs=44.4
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|++++++++|++|..+++ + ...|.+ .+|+.+.+|.+|.|+..
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~---~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDD--G---TFETRT---NTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTT--S---CEEEEE---TTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC--c---eEEEEE---CCCcEEEeeEEEEccCC
Confidence 35678888889999999999999999998752 2 244555 37778999999998765
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.04 E-value=0.35 Score=40.91 Aligned_cols=54 Identities=13% Similarity=-0.047 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.+.+.+++.|++|+++++|++|..+++ + +.|.+. +| .+.+|.||.|+...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~----~~v~~~---~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDA--Y----YTIATT---TE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSS--S----EEEEES---SC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCC--e----EEEEeC---CC-EEEeCEEEECCCCC
Confidence 4566778888899999999999999998752 2 345442 44 58899999998754
No 158
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.03 E-value=0.3 Score=40.26 Aligned_cols=57 Identities=9% Similarity=0.131 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|++++++++|+.|..+.+ ++ ..+.|.+. +|+.+.+|.+|.|+..
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~-~~--~~~~v~~~---~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAV-EG--GLHQIETA---SGAVLKARSIIVATGA 113 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--CCEEEEET---TSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEeccc-CC--ceEEEEEC---CCCEEEeCEEEECcCC
Confidence 5677888888999999999999999987531 01 23456553 6778999999998764
No 159
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=91.98 E-value=0.2 Score=45.19 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~ 112 (231)
.+.+.|.+.+++.|++|+++++|++|..+++ ++ ...+|.+....+| +++.||.||.|.....
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPR-KG--SGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCS-TT--CCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecC-CC--CEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 5677888999999999999999999987521 12 3456665311144 4789999999988654
No 160
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.91 E-value=0.25 Score=45.11 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|+ +|+++++|+++..+++ + +.+.|.+. +|+++.||.||.|+..
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~~~V~~~---~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD--E--NLWEVTTD---HGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT--T--TEEEEEET---TSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC--C--CEEEEEEc---CCCEEEeCEEEECCcc
Confidence 466778888889998 8999999999998763 3 34566663 7888999999999874
No 161
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.87 E-value=0.26 Score=45.08 Aligned_cols=56 Identities=9% Similarity=-0.026 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|. +|+++++|+++..+++ + +.+.|.+. +|+++.||.||+|+..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~w~V~~~---~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE--G--LRWTVRTD---RGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT--T--TEEEEEET---TCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC--C--CEEEEEEC---CCCEEEeCEEEECcCC
Confidence 466778888888997 8999999999998763 3 35566663 7888999999999884
No 162
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=91.86 E-value=0.13 Score=47.31 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-eEEecCEEEEcCChh-hHhhhCC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP-GIKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-~~~~aD~vV~a~p~~-~~~~Ll~ 118 (231)
.+.+.|.+.+++.|++|+++++|++|+.+++ + + .|++.. .+| ++++||.||.|...+ .+.+.+.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~---v-~v~~~~-~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAE--A---V-EVTVAG-PSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSS--C---E-EEEEEE-TTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--e---E-EEEEEe-CCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4678888999999999999999999998763 3 3 354421 367 689999999998875 4556653
No 163
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.68 E-value=0.23 Score=41.22 Aligned_cols=55 Identities=7% Similarity=0.058 Sum_probs=43.6
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.+.+.+.+.+++.|++++++++|++|..+++ + .+.|.+. +|+ +.+|.||.|+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~~---~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD--G---VFKLVTN---EET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT--S---CEEEEES---SEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC--C---cEEEEEC---CCE-EEeCEEEECCCC
Confidence 46778888999999999999999999998762 2 3456552 554 899999999776
No 164
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.67 E-value=0.3 Score=42.49 Aligned_cols=51 Identities=4% Similarity=-0.044 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.....+++++.|++++++++|++|..++ + .|.+. +|+.+.+|.+|.|+..
T Consensus 64 l~~~~~~~~~~~~i~~~~~~~V~~id~~~---~-----~v~~~---~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 64 ILIKKNDWYEKNNIKVITSEFATSIDPNN---K-----LVTLK---SGEKIKYEKLIIASGS 114 (385)
T ss_dssp TBSSCHHHHHHTTCEEECSCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHHCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEecCC
Confidence 34456677889999999999999998875 3 35563 7889999999999874
No 165
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=91.53 E-value=0.27 Score=46.00 Aligned_cols=55 Identities=13% Similarity=0.133 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|.+.+++. |++|+ +.+|+.|..++ + ++.||.+. +|+.+.||.||.|+...
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~---g--~V~GV~t~---~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS---G--KFSSVTVR---SGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEET---TSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC---C--EEEEEEEC---CCcEEEeCEEEECcCCC
Confidence 5678888999885 99995 56999999876 5 78888874 78899999999998754
No 166
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=91.53 E-value=0.32 Score=42.87 Aligned_cols=55 Identities=13% Similarity=0.090 Sum_probs=43.6
Q ss_pred CcchhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+...+.+.+.+.++++ ++++++++|++|..++ ++..+.. +|+++++|.||.++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~------~v~~v~~----~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE------RVEKVVT----DAGEYKAELVILATGI 242 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS------SCCEEEE----TTEEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC------cEEEEEe----CCCEEECCEEEEeeCC
Confidence 3445778888999999 9999999999997653 3444533 7889999999999875
No 167
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.47 E-value=0.68 Score=40.72 Aligned_cols=46 Identities=17% Similarity=0.038 Sum_probs=34.6
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChh
Q 026885 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (231)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~ 111 (231)
.|++|+++++|+++..++ + ...|.+....+|+ ++++|.||.++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~---~---~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA---Q---GIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET---T---EEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC---C---EEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 699999999999998775 3 2456665333454 48899999998863
No 168
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.37 E-value=0.44 Score=42.38 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHCCcE--EEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGR--FHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~--i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+++++.|++ |+++++|+.|..+++ + ..+.|.+....+| +++.+|+||.|+..
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~--~--~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED--S--QTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT--T--TEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC--C--CcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 5667788888888998 999999999998752 2 2355666432234 57889999999874
No 169
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.36 E-value=0.42 Score=43.70 Aligned_cols=55 Identities=13% Similarity=0.050 Sum_probs=45.2
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.+.+.+.+.++++|++|++++.|+++...+ + + ..|.+ .+++.+.+|.|+.|+.-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~---~--~-~~v~~---~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMD---D--K-ILVEF---SDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecC---C--e-EEEEE---cCCCeEEEEEEEEcccc
Confidence 3578899999999999999999999999876 3 2 33545 37778889999999874
No 170
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.30 E-value=0.059 Score=46.74 Aligned_cols=46 Identities=9% Similarity=-0.115 Sum_probs=37.3
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.++++|++++++++|+.++.+++ + ..+.+ .+|+++++|.+|.+.|.
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~--~----~~v~~---~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTE--A----MTVET---SFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETT--T----TEEEE---TTSCEEECSEEEECCCE
T ss_pred HHHhcCcEEEeCceEEEEEeccc--c----eEEEc---CCCcEEEeeEEEEecCc
Confidence 34688999999999999988762 2 34666 48999999999999874
No 171
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.28 E-value=0.43 Score=41.21 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-Hhhh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~L 116 (231)
+.+.|.+.+ .|++|+++++|++|..++ + ++ .|.+. +|+++.||.||.|...+. +.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~---~--~v-~v~~~---~g~~~~ad~vV~AdG~~S~vr~~ 158 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDS---E--TV-QMRFS---DGTKAEANWVIGADGGASVVRKR 158 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECS---S--CE-EEEET---TSCEEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecC---C--EE-EEEEC---CCCEEECCEEEECCCcchhHHHH
Confidence 334444443 499999999999999876 3 33 35553 788899999999988753 4443
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.26 E-value=0.35 Score=40.32 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|++++++++|++|..++ + ...|.+ .+|+.+.+|.||.|+..
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~---~~~v~~---~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREG---D---LFKVTT---SQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEET---T---EEEEEE---TTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECC---C---EEEEEE---CCCCEEEeCEEEECCCC
Confidence 567778888888999999999999998875 2 234544 36778999999998765
No 173
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=91.23 E-value=0.26 Score=45.83 Aligned_cols=86 Identities=14% Similarity=0.071 Sum_probs=53.7
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCChhhHhhhC-CCc------ccC--chH--
Q 026885 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPGIKRLL-PSS------WRE--MKF-- 126 (231)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~~~~~~Ll-~~~------~~~--~~~-- 126 (231)
.|++|++++.|++|..+++ ++ +++||++.+..+|+ ++.||.||+++......++| ... +.. .+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~-~~--~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~~l 349 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNAL-NS--EIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPELL 349 (623)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--CEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCSSC
T ss_pred CCEEEEeCCEEEEEEEECC-CC--EEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCCCC
Confidence 3899999999999999752 13 79999887422344 67899999998863322222 111 000 000
Q ss_pred HHHhhCCCCCcEEEEEEEecCc
Q 026885 127 FNNIYALVGVPVVTVQLRYNGW 148 (231)
Q Consensus 127 ~~~~~~l~~~~i~~v~L~~d~~ 148 (231)
-.--.+|..++.+.+.+.++.+
T Consensus 350 ~~vG~nl~dh~~~~~~~~~~~~ 371 (623)
T 3pl8_A 350 PSLGSYITEQSLVFCQTVMSTE 371 (623)
T ss_dssp TTTTBSCBCCCEEEEEEEECHH
T ss_pred cccccchhhCcCceEEEEECCc
Confidence 0011355566788888888764
No 174
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.17 E-value=0.32 Score=39.56 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|++|+. ++|++|..+ . +|.+. +|+.+++|.||.++..
T Consensus 175 ~~~~~~~~~l~~~gv~i~~-~~v~~i~~~-------~--~v~~~---~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVET-TRIREIAGH-------A--DVVLA---DGRSIALAGLFTQPKL 224 (297)
T ss_dssp CCCHHHHHHHHHTTCEEEC-SCEEEEETT-------E--EEEET---TSCEEEESEEEECCEE
T ss_pred CCCHHHHHHHHHCCcEEEc-ceeeeeecC-------C--eEEeC---CCCEEEEEEEEEccCc
Confidence 4677889999999999995 999998643 1 46664 8889999999999865
No 175
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.06 E-value=0.32 Score=43.18 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=41.4
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.++++|++|+++++|++|.. + + +.+.. .+| +++++|.||.++..
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~------~---v~v~~-~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-G------C---LLAND-GKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-T------E---EEEEC-SSSCCCEECCSCEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-C------C---EEEEE-CCCceEEEECCEEEECcCC
Confidence 45778889999999999999999999975 4 3 22321 245 68899999999875
No 176
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=91.05 E-value=0.28 Score=42.49 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-HhhhC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~Ll 117 (231)
.+.+.|.+.+++ ++|+++++|++|+.++ + . ..|.+ .+|+++.||.||.|...+. +.+.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~---~--~-v~v~~---~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA---D--G-VTVWF---TDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC---C--c-EEEEE---cCCCEEeeCEEEECCCcChHHHHHh
Confidence 456777777766 8999999999999886 3 2 33555 3788999999999988753 44444
No 177
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.90 E-value=0.33 Score=41.03 Aligned_cols=54 Identities=9% Similarity=0.221 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEe-cCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~-aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.| ++|+++++|++|..++ + ...|.+. +|+.+. +|.||.++..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~---~---~~~v~~~---~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN---G---QYHISFD---SGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET---T---EEEEEES---SSCCEEESSCCEECCCB
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC---C---ceEEEec---CCeEeccCCceEEeecc
Confidence 45578888889997 9999999999997654 2 2356564 676664 6999998875
No 178
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=90.34 E-value=0.44 Score=41.89 Aligned_cols=51 Identities=8% Similarity=0.047 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-cCC-----CeEEecCEEEEcCC
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATD-----KKVVQADAYVAACD 109 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~-~~~-----g~~~~aD~vV~a~p 109 (231)
..+.+.+.++++|++++++++|++|.-+ + +.+.. ..+ ++++++|.+|.+.+
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~----~------v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN----K------MYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT----E------EEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC----e------EEEEecccCCccccceEEEEeEEEEcCC
Confidence 5778889999999999999999999632 1 22221 112 56789999998865
No 179
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=90.13 E-value=1 Score=40.21 Aligned_cols=56 Identities=9% Similarity=-0.040 Sum_probs=43.1
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++. ++|+++++|++|..++ + ++ .+.+.. .+| +++++|.||.++..
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~---~--~v-~v~~~~-~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKE---D--AV-EVIYFD-KSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECS---S--SE-EEEEEC-TTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcC---C--EE-EEEEEe-CCCceEEEECCEEEEeeCC
Confidence 46788888999888 9999999999998876 3 33 244421 256 68899999999875
No 180
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=90.07 E-value=0.27 Score=44.86 Aligned_cols=48 Identities=10% Similarity=0.156 Sum_probs=37.5
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecC-EEEEcCCh
Q 026885 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQAD-AYVAACDV 110 (231)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD-~vV~a~p~ 110 (231)
+.|++|++++.|++|.++++ + +++||++....+|+ ++.|+ .||+++..
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~--~--~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD--R--RCTGVDIVDSAFGHTHRLTARNEVVLSTGA 271 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT--S--BEEEEEEESSTTSCEEEEEEEEEEEECSHH
T ss_pred CCCcEEEeCCEEEEEEECCC--C--eEEEEEEEECCCCcEEEEEeCccEEEecCc
Confidence 57899999999999999862 4 89999886311153 67898 89988876
No 181
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=89.67 E-value=0.33 Score=40.34 Aligned_cols=57 Identities=18% Similarity=0.062 Sum_probs=43.0
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|+++++++ |+++..++ + . ..+.+....+++.+.+|.+|.|+..
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~---~--~-~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLSS---K--P-FKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECSS---S--S-EEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC---C--E-EEEEEEecCCCcEEEeCEEEECcCC
Confidence 3678889999999999999999 99998876 3 2 2343321126678899999998765
No 182
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.64 E-value=0.43 Score=43.54 Aligned_cols=56 Identities=7% Similarity=0.083 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+..++.|. .|+++++|+++..+++ + +.+.|.+. +|+++.||.||+|+..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~~---~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN--D--RLWEVTLD---NEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG--G--TEEEEEET---TTEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC--C--CEEEEEEC---CCCEEEeCEEEECcCC
Confidence 567778888888887 8999999999998763 3 34567663 8889999999999884
No 183
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.55 E-value=0.56 Score=38.54 Aligned_cols=55 Identities=15% Similarity=-0.050 Sum_probs=42.6
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
..+.+.+.+.+++.|+++++ ++|++|..++ + ...+.+. +|+.+.+|.+|.|+...
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~---~~~v~~~---~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRG---D---EFVVKTK---RKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--------CEEEEES---SSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecC---C---EEEEEEC---CCCEEEcCEEEECcCCC
Confidence 35778888999999999999 9999998876 2 2345553 67889999999997654
No 184
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.30 E-value=0.69 Score=40.67 Aligned_cols=57 Identities=11% Similarity=-0.110 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe---EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~---~~~aD~vV~a~p~ 110 (231)
.+.+.+.+++++.+..|+++++|++|..++ + .+.|++.+..+|+ ++.+|.||.|...
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~---~---~~~V~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD---G---SWVVTYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET---T---EEEEEEEESSTTCCEEEEEESEEEECCCS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC---C---eEEEEEeecCCCCeeEEEEeCEEEECCCC
Confidence 456677777777788999999999998765 3 2456554211265 7899999998775
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.29 E-value=0.64 Score=42.02 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|++++.+++|+.|..+.+ ++ ....|.+. +|+.+.+|.||.|+..
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~V~~~---~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAAT-EG--GLHQIETA---SGAVLKARSIIIATGA 324 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--SCEEEEET---TSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccC-CC--ceEEEEEC---CCCEEEcCEEEECCCC
Confidence 5678888999999999999999999986421 01 23456663 7888999999998774
No 186
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.28 E-value=0.74 Score=37.87 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=42.2
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|+++++ ++|++|..++ + + ..|.+ .+|+.+.+|.||.|+..
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~---~--~-~~v~~---~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD---S--H-FVILA---EDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEET---T--E-EEEEE---TTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC---C--E-EEEEE---cCCCEEECCEEEECCCC
Confidence 35677888888999999998 8999998875 2 2 34544 37788999999998774
No 187
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.65 E-value=0.9 Score=37.75 Aligned_cols=53 Identities=21% Similarity=0.155 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.+.+.+++.|+++++++ |+.|..++ + . ..|.+ +|+++.+|.||.|....
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~---~--~-~~v~~----~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS---K--P-FKLFT----DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS---S--S-EEEEC----SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC---C--E-EEEEE----CCcEEEcCEEEECCCCC
Confidence 577888889999999999997 99998765 2 1 33433 67889999999988753
No 188
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=88.38 E-value=0.84 Score=42.39 Aligned_cols=69 Identities=13% Similarity=0.165 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEEec---CCC--eEEecCEEEEcCChhh-HhhhCC
Q 026885 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKA---TDK--KVVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~---~~g--~~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
.+.+.|.+.+++.|+ +|+++++|++|+.+++.++ ....|++... .+| ++++||.||.|...+. +.+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~--~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAAD--YPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSS--CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCc--CCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 567788999999997 9999999999998751001 2244555420 134 5789999999988764 666664
No 189
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=88.37 E-value=0.95 Score=39.15 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHC-C-cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh-HhhhC
Q 026885 48 YLSGPIRKYITDK-G-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~-G-g~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~-~~~Ll 117 (231)
.|.+.|.+.+++. | ++|+++++|++|.. ++ + + .|.+.+..+| +++.||.||.|...+. +.+.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~--~---v-~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD--G---R-VLIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET--T---E-EEEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC--c---c-EEEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 4567788888774 7 48999999999988 52 3 3 3555421136 5789999999988754 55443
No 190
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=88.36 E-value=0.57 Score=38.77 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAAC 108 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~ 108 (231)
.+.+.+.+.+++.|++++.++ |+.+..++ + ++.+|.+. +|+.+.+|.+|.++
T Consensus 181 ~~~~~~~~~l~~~g~~~~~~~-v~~~~~~~---~--~~~~v~~~---~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 181 ELSQTIMDELSNKNIPVITES-IRTLQGEG---G--YLKKVEFH---SGLRIERAGGFIVP 232 (304)
T ss_dssp CCCHHHHHHHHTTTCCEECSC-EEEEESGG---G--CCCEEEET---TSCEECCCEEEECC
T ss_pred cchhhhhhhhhccceeEeeee-EEEeecCC---C--eeeeeecc---ccceeeecceeeee
Confidence 356788899999999998875 88887765 4 67888884 88899989877664
No 191
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.85 E-value=0.86 Score=41.30 Aligned_cols=56 Identities=9% Similarity=0.016 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHCC--cEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 49 LSGPIRKYITDKG--GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 49 l~~~l~~~l~~~G--g~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+.+-+.+..++.| .+|+++++|+++..+++ + ..+.|.+. +|+++.||.||+|+...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~~---~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEA--T--NTWTVDTN---HGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETT--T--TEEEEEET---TCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC--C--CeEEEEEC---CCCEEEeCEEEECcCCC
Confidence 4555566666666 68999999999998752 2 34556653 78889999999998853
No 192
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=87.84 E-value=1 Score=37.33 Aligned_cols=55 Identities=11% Similarity=0.024 Sum_probs=42.5
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEec--cCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~--~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|++++. ++|++|..+ + + ....|.+. +|+.+.+|.+|.|+..
T Consensus 65 ~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~---~--~~~~v~~~---~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS---H--PYPFTVRG---YNGEYRAKAVILATGA 121 (325)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS---S--SCCEEEEE---SSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC---C--ceEEEEEC---CCCEEEeCEEEECcCC
Confidence 35778888899999999998 689999887 4 2 22345554 7788999999999775
No 193
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.82 E-value=1.3 Score=41.29 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~ 111 (231)
.....+.+.++++|++++++++|++|. + + ++++.. +| +++++|.||.++...
T Consensus 574 ~~~~~~~~~l~~~GV~v~~~~~v~~i~--~---~-----~v~~~~--~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 574 TTGWIHRTTLLSRGVKMIPGVSYQKID--D---D-----GLHVVI--NGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTHHHHHHHHHHTTCEEECSCEEEEEE--T---T-----EEEEEE--TTEEEEECCSEEEECCCEE
T ss_pred ccHHHHHHHHHhcCCEEEeCcEEEEEe--C---C-----eEEEec--CCeEEEEeCCEEEECCCcc
Confidence 344567889999999999999999996 3 2 133321 66 678999999998854
No 194
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=87.57 E-value=0.83 Score=44.66 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=40.9
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cC--CC--eEEecCEEEEcCCh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--AT--DK--KVVQADAYVAACDV 110 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~--~~--~g--~~~~aD~vV~a~p~ 110 (231)
.+.+++.|++|+++++|++|.-+++ + ++.+|++.. .. +| +++++|.||.++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~--~--~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN--G--ELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT--S--CEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC--C--CEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 6778999999999999999987411 4 677888762 00 14 67899999999874
No 195
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=87.50 E-value=0.54 Score=43.42 Aligned_cols=50 Identities=10% Similarity=0.049 Sum_probs=35.5
Q ss_pred HHCCcEEEcCceeeEEEeccCC-CCcceEEEEEEEecCCCe--EEecC-EEEEcCCh
Q 026885 58 TDKGGRFHLRWGCREILYDKAA-NAETYVKGLAMSKATDKK--VVQAD-AYVAACDV 110 (231)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~-~~~~~v~~v~~~~~~~g~--~~~aD-~vV~a~p~ 110 (231)
++.+.+|++++.|++|.++++. ++ +++||++.. .+|+ ++.|. .||+++..
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~--ra~GV~~~~-~~G~~~~v~A~kEVILsAGa 291 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTP--RAVGVEFGT-HKGNTHNVYAKHEVLLAAGS 291 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSC--EEEEEEEES-STTCEEEEEEEEEEEECSCT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCC--EEEEEEEEe-cCCcEEEEEECCEEEEeCCc
Confidence 4578999999999999998300 05 899998852 1443 56676 57777664
No 196
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=87.43 E-value=2.3 Score=36.24 Aligned_cols=64 Identities=8% Similarity=0.115 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCC-CcceEEEEEEEe-----------cCCCeEEec-------------
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAAN-AETYVKGLAMSK-----------ATDKKVVQA------------- 101 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~-~~~~v~~v~~~~-----------~~~g~~~~a------------- 101 (231)
.+.+.|.+.+++. |++|+.+++|++|..+++.+ |..++.||++.. ..++.++.|
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~ 226 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSST
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccc
Confidence 4577888888885 99999999999999874100 101688987641 014467889
Q ss_pred --CEEEEcCChh
Q 026885 102 --DAYVAACDVP 111 (231)
Q Consensus 102 --D~vV~a~p~~ 111 (231)
|.||.|+...
T Consensus 227 ~~~~VV~ATG~~ 238 (326)
T 2gjc_A 227 KHGVILSTTGHD 238 (326)
T ss_dssp TCCEEEECCCCC
T ss_pred cCCEEEECcCCC
Confidence 9999998865
No 197
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=87.22 E-value=0.52 Score=40.70 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-HhhhCC
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~Ll~ 118 (231)
+.+.|.+.++ +++|+++++|++|+.+++ + + .|++. +|++++||.||.|...+. +.+.+.
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~~--~---v-~v~~~---~g~~~~ad~vV~AdG~~S~vR~~l~ 189 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGKK--K---W-TLTFE---NKPSETADLVILANGGMSKVRKFVT 189 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECSS--S---E-EEEET---TSCCEEESEEEECSCTTCSCCTTTC
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECCC--E---E-EEEEC---CCcEEecCEEEECCCcchhHHhhcc
Confidence 3344444443 478999999999998762 3 3 46553 787899999999988754 455553
No 198
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=87.21 E-value=2.3 Score=38.32 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=41.5
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEeccCC-CCcceEEEEEEEecCCC-e--EEecCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAA-NAETYVKGLAMSKATDK-K--VVQADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~-~~~~~v~~v~~~~~~~g-~--~~~aD~vV~a~p~ 110 (231)
...+.+.+.+.++++|++|+++++|+++...++. ++ + ..+.+.. .+| + .+++|.||.++..
T Consensus 249 d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~--~-~~v~~~~-~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 249 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPG--R-LRVVAQS-TNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTC--E-EEEEEEE-SSSSCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCc--e-EEEEEEE-CCCcEEEEEECCEEEEecCC
Confidence 3467888999999999999999998888754310 02 1 2233322 234 2 5679999999875
No 199
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=87.15 E-value=1.2 Score=36.57 Aligned_cols=53 Identities=13% Similarity=0.047 Sum_probs=41.2
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|+++++++ |+.+..++ + . ..+ +. +|+.+.+|.+|.|+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~---~--~-~~v-~~---~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDLQN---R--P-FRL-NG---DNGEYTCDALIIATGA 114 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSS---S--S-EEE-EE---SSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEecC---C--E-EEE-Ee---CCCEEEcCEEEECCCC
Confidence 3577888889999999999997 99998765 2 2 233 43 7788999999988764
No 200
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=86.96 E-value=0.96 Score=39.72 Aligned_cols=59 Identities=12% Similarity=-0.037 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe----EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~----~~~aD~vV~a~p~ 110 (231)
.+.+-+..+.++.|++|+++++|++|..+++ ++ +.+.+.+.. .+|+ ++.+|.||.|+..
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-~~--~~~~~~V~~-~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLS-AG--QVEALRVIS-RNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEE-TT--EEEEEEEEE-EETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecC-CC--ceEEEEEEE-ecCCCceEEEEeCEEEECCCC
Confidence 4556666666777999999999999998731 12 444333321 1333 7889999998764
No 201
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=86.72 E-value=0.47 Score=42.28 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=36.9
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe-----------------cCCCeEEecCEEEEcCCh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-----------------ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~-----------------~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+++.|++|++++.+++|.-+ | ++++|++.. .++++++++|.||.++..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~~----g--~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTGD----T--VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEEE----E--EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeCC----C--cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 56788899999999999999743 4 565554421 012247889999999875
No 202
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=86.07 E-value=0.63 Score=41.41 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=39.7
Q ss_pred HHHHHHHHHH------CCcEEEcCceeeEEEeccCCCCcceEEEEEEEec-------------CCC--eEEecCEEEEcC
Q 026885 50 SGPIRKYITD------KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA-------------TDK--KVVQADAYVAAC 108 (231)
Q Consensus 50 ~~~l~~~l~~------~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~-------------~~g--~~~~aD~vV~a~ 108 (231)
.+.+.+++++ +|++|++++++.+|.-+ + ++.+|++... .+| ++++||.||.++
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~----~--~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~ 322 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK----R--KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSV 322 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS----S--SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECS
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC----C--cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcc
Confidence 3455666666 89999999999999754 3 5666665410 134 468999999998
Q ss_pred Chh
Q 026885 109 DVP 111 (231)
Q Consensus 109 p~~ 111 (231)
...
T Consensus 323 G~~ 325 (456)
T 1lqt_A 323 GYR 325 (456)
T ss_dssp CEE
T ss_pred ccc
Confidence 864
No 203
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=85.95 E-value=1.2 Score=37.27 Aligned_cols=53 Identities=13% Similarity=0.088 Sum_probs=40.6
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEE-EEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL-AMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v-~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|+++++++ |++|...+ . ..| .+ .+|+.+.+|.+|.|+..
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~~~---~----~~v~~~---~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSLHG---P----LKSVVT---ADGQTHRARAVILAMGA 124 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSS---S----SEEEEE---TTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEeCC---c----EEEEEe---CCCCEEEeCEEEECCCC
Confidence 3567788888999999999997 99998722 2 334 44 36778999999988764
No 204
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=85.56 E-value=1.3 Score=39.41 Aligned_cols=49 Identities=6% Similarity=0.089 Sum_probs=34.8
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--------------cCCCeEEecCEEEEcCChh
Q 026885 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSK--------------ATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~--------------~~~g~~~~aD~vV~a~p~~ 111 (231)
+|++|++++.+++|.-+++ ++ ++.+|++.. +++++++++|.||.++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~--~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GR--RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-Cc--eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 8999999999999986531 01 466676541 1122578999999998853
No 205
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.99 E-value=1.8 Score=42.62 Aligned_cols=55 Identities=9% Similarity=0.098 Sum_probs=40.9
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe---cCCC---------eEEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK---------KVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~---~~~g---------~~~~aD~vV~a~p~ 110 (231)
+...+.+++.|++|++++.+++|..++ + ++++|++.+ +.+| ++++||.||.++..
T Consensus 374 ~~e~~~~~~~Gv~~~~~~~~~~i~~~~---g--~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 374 PEEVELAKEEKCEFLPFLSPRKVIVKG---G--RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEEEET---T--EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHHcCCEEEeCCCceEEEccC---C--eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 344567889999999999999998754 5 788876641 1122 36889999999864
No 206
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=84.87 E-value=3 Score=35.86 Aligned_cols=64 Identities=8% Similarity=0.157 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHH-CCcEEEcCceeeEEEeccC--------------CCCcceEEEEEEEe---cC--------CCeEEec
Q 026885 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKA--------------ANAETYVKGLAMSK---AT--------DKKVVQA 101 (231)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~--------------~~~~~~v~~v~~~~---~~--------~g~~~~a 101 (231)
.+.+.|.+.+++ .|++|+.+++|++|..+++ .+|..++.||++.. .. +..++.|
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A 240 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA 240 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc
Confidence 456888888888 4999999999999998751 00112788887641 01 3357899
Q ss_pred CEEEEcCChh
Q 026885 102 DAYVAACDVP 111 (231)
Q Consensus 102 D~vV~a~p~~ 111 (231)
+.||.|....
T Consensus 241 k~VV~ATG~~ 250 (344)
T 3jsk_A 241 PVIISTTGHD 250 (344)
T ss_dssp SEEEECCCSS
T ss_pred CEEEECCCCC
Confidence 9999998865
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=84.64 E-value=1.6 Score=38.31 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=37.3
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+++.|++++++++|+.|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~~~---~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDR---Q-----QVILS---DGRALDYDRLVLATGG 112 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEcCCC
Confidence 567788999999999999998764 2 35553 7888999999998764
No 208
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=83.48 E-value=2.5 Score=34.86 Aligned_cols=52 Identities=8% Similarity=-0.054 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|++++. ++|++|..++ + . ..|.+ +++.+.+|.+|.|...
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~--~-~~v~~----~~~~~~~~~li~AtG~ 124 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ---G--G-FDIET----NDDTYHAKYVIITTGT 124 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET---T--E-EEEEE----SSSEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC---C--E-EEEEE----CCCEEEeCEEEECCCC
Confidence 5677888889999999999 7999998875 2 2 23443 5678899999999764
No 209
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.14 E-value=1.8 Score=37.01 Aligned_cols=48 Identities=17% Similarity=0.102 Sum_probs=37.3
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
....+++++.|++++++++|+.|..++ . .|. . +|+++.+|++|.|+..
T Consensus 64 ~~~~~~~~~~~v~~~~g~~v~~id~~~---~-----~V~-~---~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 64 PYSLDWYRKRGIEIRLAEEAKLIDRGR---K-----VVI-T---EKGEVPYDTLVLATGA 111 (367)
T ss_dssp SSCHHHHHHHTEEEECSCCEEEEETTT---T-----EEE-E---SSCEEECSEEEECCCE
T ss_pred cCCHHHHHhCCcEEEECCEEEEEECCC---C-----EEE-E---CCcEEECCEEEECCCC
Confidence 344567788999999999999998764 2 233 3 6788999999999774
No 210
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=81.94 E-value=1.5 Score=40.42 Aligned_cols=48 Identities=13% Similarity=0.123 Sum_probs=35.1
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEec-CEEEEcCCh
Q 026885 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDV 110 (231)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~a-D~vV~a~p~ 110 (231)
+.+.+|++++.|++|.++++ ++ +++||++... +|+ ++.| ..||+++..
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~-~~--~a~GV~~~~~-~g~~~~v~A~keVILsaGa 268 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEA-DR--TCKGVTVVTA-AGNELNFFADREVILSQGV 268 (577)
T ss_dssp CTTEEEECSEEEEEEEEETT-TT--EEEEEEEEET-TSCEEEEEEEEEEEECSHH
T ss_pred CCCeEEEcCcEEEEEEEeCC-CC--EEEEEEEEeC-CCcEEEEEeeeEEEEcccc
Confidence 45899999999999999831 15 8999998642 244 4567 458887764
No 211
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=81.88 E-value=1.9 Score=37.36 Aligned_cols=46 Identities=13% Similarity=0.092 Sum_probs=37.3
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+++++.|++++++++|+.|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 64 ~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 64 ADWYGEARIDMLTGPEVTALDVQT---R-----TISLD---DGTTLSADAIVIATGS 109 (410)
T ss_dssp TTHHHHTTCEEEESCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEeCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEEccCC
Confidence 456788999999999999998775 2 35553 7888999999999874
No 212
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.55 E-value=3.6 Score=37.57 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=40.6
Q ss_pred cchhHHHHHHHHHHCCcEEEcCceeeEEEec------cCCCCcceEEEEEEEecCCCeEEe--cCEEEEcCCh
Q 026885 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYD------KAANAETYVKGLAMSKATDKKVVQ--ADAYVAACDV 110 (231)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~------~~~~~~~~v~~v~~~~~~~g~~~~--aD~vV~a~p~ 110 (231)
.+.+.+.+.+.++++|++|++++.+++|... ++..+ ++ .+.+.. .+|+.++ +|.||.++..
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~--~~-~v~~~~-~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPG--LL-LVKGHY-TDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCC--EE-EEEEEE-TTSCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCc--eE-EEEEEe-CCCcEEeccCCEEEEEeCC
Confidence 3457788889999999999999988888532 10002 22 122211 2666555 9999999875
No 213
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=81.42 E-value=1.4 Score=37.41 Aligned_cols=55 Identities=7% Similarity=0.038 Sum_probs=39.5
Q ss_pred HHHHHH-HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh-Hhh
Q 026885 53 IRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKR 115 (231)
Q Consensus 53 l~~~l~-~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~-~~~ 115 (231)
|.+.|. ..+.+|+++++|++++..++ + + ..|.+ .||++++||.||-|-..+. +.+
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~--~--~-v~v~~---~dG~~~~adlvVgADG~~S~vR~ 170 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIEN--G--G-IKIFF---ADGSHENVDVLVGADGSNSKVRK 170 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTT--S--C-EEEEE---TTSCEEEESEEEECCCTTCHHHH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCC--C--e-EEEEE---CCCCEEEeeEEEECCCCCcchHH
Confidence 444443 34678999999999987653 4 3 34556 3899999999999977764 444
No 214
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=80.98 E-value=1.2 Score=40.96 Aligned_cols=49 Identities=6% Similarity=0.028 Sum_probs=36.1
Q ss_pred HHCCcEEEcCceeeEEEec----cCCCCcceEEEEEEEecCCC---eEEec-CEEEEcCChh
Q 026885 58 TDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDK---KVVQA-DAYVAACDVP 111 (231)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~----~~~~~~~~v~~v~~~~~~~g---~~~~a-D~vV~a~p~~ 111 (231)
.+.+.+|++++.|++|.++ ++ + +++||++... +| .++.| ..||+++..-
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~--~--rA~GVe~~~~-~g~~~~~v~A~kEVILsAGai 275 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGL--P--AFRCVEYAEQ-EGAPTTTVCAKKEVVLSAGSV 275 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTE--E--ECCEEEEESS-TTSCCEEEEEEEEEEECCHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCC--C--EEEEEEEEEC-CCceEEEEEeeeEEEEecCCc
Confidence 4578999999999999998 31 3 8999998632 23 35667 5688887743
No 215
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=80.71 E-value=2.5 Score=39.86 Aligned_cols=26 Identities=8% Similarity=-0.133 Sum_probs=22.6
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEe
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILY 75 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (231)
.+.+.+.++++|++|+++++|++|.-
T Consensus 574 ~~~~~~~l~~~GV~i~~~~~v~~i~~ 599 (729)
T 1o94_A 574 YPNMMRRLHELHVEELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEET
T ss_pred HHHHHHHHHhCCCEEEcCcEEEEEEC
Confidence 35678889999999999999999963
No 216
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=80.13 E-value=4.5 Score=36.61 Aligned_cols=61 Identities=13% Similarity=0.191 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCChhh-HhhhC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~~~-~~~Ll 117 (231)
.+.+.|.+.+++. |+++++|++|+.++ + .++ +++.+..+| ++++||.||.|...+. +.+.+
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~---~--~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRD---D--HVR-ATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECS---S--CEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeC---C--EEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 3456677777766 99999999999876 3 343 555432235 5789999999988754 55554
No 217
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=79.62 E-value=1.8 Score=38.68 Aligned_cols=53 Identities=17% Similarity=0.079 Sum_probs=38.8
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhh
Q 026885 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL 116 (231)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~L 116 (231)
+.+.+|.+++.|++|..++ + +++||.+........+.|+.||+++..-...+|
T Consensus 223 r~nl~v~~~~~v~~i~~~~---~--~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~L 275 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG---N--QVRSLEVVGRQGSAEVFADQIVLCAGALESPAL 275 (526)
T ss_dssp CTTEEEECSCEEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCCeEEEeCCEEEEEEecC---C--eEEEEEEEecCceEEEeecceEEcccccCCcch
Confidence 3468999999999999997 5 899998764222245678999998875433333
No 218
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=79.36 E-value=2.9 Score=33.66 Aligned_cols=53 Identities=9% Similarity=-0.053 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++. |++++ +++|+.|..++ + -..|.+ .+|+++.+|.+|.|+..
T Consensus 57 ~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~---~---~~~v~~---~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWV-EGRVTDAKGSF---G---EFIVEI---DGGRRETAGRLILAMGV 110 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEE-ESCEEEEEEET---T---EEEEEE---TTSCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC---C---eEEEEE---CCCCEEEcCEEEECCCC
Confidence 5677888888887 56665 56999998876 2 245655 37788999999999765
No 219
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=78.87 E-value=2.4 Score=38.39 Aligned_cols=55 Identities=7% Similarity=0.100 Sum_probs=39.1
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EE---ecCEEEEcCChh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVP 111 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~---~aD~vV~a~p~~ 111 (231)
.+..++.|++|++++.|++|.++++ +.++++||++.. .+|+ ++ .++.||+++..-
T Consensus 201 ~~~~~~~~~~v~~~~~v~~i~~~~~--~~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~ 260 (536)
T 1ju2_A 201 LNKGNSNNLRVGVHASVEKIIFSNA--PGLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTI 260 (536)
T ss_dssp GGGSCTTTEEEEESCEEEEEEECCS--SSCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHH
T ss_pred hhhhcCCCcEEEeCCEEEEEEECCC--CCCEEEEEEEEe-CCCceEEEEeccCCEEEEcCccc
Confidence 3334678999999999999999862 112799998853 1454 34 568899888753
No 220
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=78.65 E-value=1.8 Score=39.77 Aligned_cols=51 Identities=10% Similarity=0.067 Sum_probs=36.6
Q ss_pred HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEec-CEEEEcCCh
Q 026885 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDV 110 (231)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~a-D~vV~a~p~ 110 (231)
++.|.+|++++.|++|.++++ ++..+++||++.. .+|+ ++.| +.||+++..
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~-~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~ 295 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQT-ASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGS 295 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEE-TTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCT
T ss_pred cCCCcEEEcCCEEEEEEECCC-CCCCEEEEEEEEe-CCCcEEEEEecccEEEccCC
Confidence 457899999999999999752 1012799998752 1454 5667 788888774
No 221
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=78.31 E-value=1.8 Score=39.32 Aligned_cols=49 Identities=10% Similarity=0.081 Sum_probs=38.3
Q ss_pred HHHHHHHHHCCcEEEc--CceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhH
Q 026885 51 GPIRKYITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~--~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~ 113 (231)
+...+.+.+.++++.. +++|++|.-+ ||++. +| .+++|.||+|+.+...
T Consensus 342 ~~y~~al~~~nV~lv~~~~~~I~~it~~----------gv~~~---dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 342 TNYYETYNRDNVHLVDIREAPIQEVTPE----------GIKTA---DA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEEETT----------EEEES---SC-EEECSEEEECCCCBSS
T ss_pred ccHHHHhcCCCEEEEecCCCCceEEccC----------eEEeC---CC-eeecCEEEECCccccc
Confidence 3456667778999987 8999998532 47774 78 8999999999998754
No 222
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=77.77 E-value=3 Score=36.03 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.....+++++.|++++++++|+.|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPAA---H-----TVKLG---DGSAIEYGKLIWATGG 117 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETTT---T-----EEEET---TSCEEEEEEEEECCCE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECCC---C-----EEEEC---CCCEEEeeEEEEccCC
Confidence 33445677889999999999999998765 2 35553 7888999999999763
No 223
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=77.30 E-value=0.72 Score=40.47 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+..++.+.+++.|++++.+ +|++|..++ + .|.+. +|+++++|++|.|+...
T Consensus 58 i~~~~~~~~~~~gv~~i~~-~v~~Id~~~---~-----~V~~~---~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 58 ISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTTQ---SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp SEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEET---TCCEEECSEEEECCCCE
T ss_pred hhhcHHHHHHHCCcEEEEe-EEEEEECCC---C-----EEEEC---CCCEEECCEEEEeCCCC
Confidence 3445566778889999876 799998876 3 35563 88899999999998754
No 224
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=76.25 E-value=4.9 Score=35.21 Aligned_cols=50 Identities=6% Similarity=0.035 Sum_probs=37.2
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+++.|++++++++|++|..++ + ...+.. .++++.+.+|.+|.|+..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~---~---~v~v~~--~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN---Q---LIAWTR--KEEQQWYSYDKLILATGA 113 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT---T---EEEEEE--TTEEEEEECSEEEECCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC---C---EEEEEe--cCceEEEEcCEEEECCCc
Confidence 4567788999999999999998876 3 223321 135678899999988664
No 225
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=76.00 E-value=3.1 Score=36.51 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=35.6
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+..++.|++++++++|++|..+. . ...+......++..+.+|++|.|+..
T Consensus 64 ~~~~~~~~i~~~~~~~V~~id~~~---~---~~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 64 EKFYDRKQITVKTYHEVIAINDER---Q---TVSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp HHHHHHHCCEEEETEEEEEEETTT---T---EEEEEETTTTEEEEEECSEEEECCCE
T ss_pred HHHHHhcCCEEEeCCeEEEEEccC---c---EEEEEeccCCceEEEEcCEEEECCCC
Confidence 456778899999999999998775 2 22222211123446789999999875
No 226
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=74.93 E-value=4.1 Score=35.92 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.++ ++|+++++|++|..+++ + ++ .+.+.. .+|+ ++++|.||.++..
T Consensus 215 ~~~~~l~~~l~---v~i~~~~~v~~i~~~~~--~--~v-~v~~~~-~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 215 DIVNTLLSILK---LNIKFNSPVTEVKKIKD--D--EY-EVIYST-KDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHHC---CCEECSCCEEEEEEEET--T--EE-EEEECC-TTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHhcCE---EEEEECCEEEEEEEcCC--C--cE-EEEEEe-cCCceEEEEcCEEEECcCC
Confidence 34555555544 99999999999987651 2 33 355531 1354 7899999999885
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=74.70 E-value=5.3 Score=36.29 Aligned_cols=54 Identities=7% Similarity=0.034 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
+...+..+.++.|++++++++|++|..++ + . +.+....+|+ .+.+|.+|.|+..
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE---K--T---ITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEeecCCCCEEEEeCCEEEECCCC
Confidence 45567777788999999999999998876 3 2 3333212455 6789999998764
No 228
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=74.23 E-value=7.1 Score=33.25 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=35.9
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.+.+++.|++++++++|+.|..++ . .|.+ +++.+.+|.+|.|+..
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~----~~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPGH---Q-----RIWI----GEEEVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGGG---T-----EEEE----TTEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEeCCEEEEEECCC---C-----EEEE----CCcEEECCEEEEeCCC
Confidence 4556688999999999999998765 2 3545 4567899999998774
No 229
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=74.04 E-value=4.4 Score=35.36 Aligned_cols=51 Identities=24% Similarity=0.353 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+...+.+.+++.|++++ ..+|++|..++ + .|.+. +|+.+.+|++|.|+...
T Consensus 61 ~~~~l~~~~~~~gv~~~-~~~v~~id~~~---~-----~V~~~---~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFI-AQSAEQIDAEA---Q-----NITLA---DGNTVHYDYLMIATGPK 111 (437)
T ss_dssp HEEECHHHHHTTTCEEE-CSCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCCE
T ss_pred HHHHHHHHHHHCCCEEE-EeEEEEEEcCC---C-----EEEEC---CCCEEECCEEEECCCCC
Confidence 44456788888999997 46999998765 2 35553 78889999999998764
No 230
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=73.24 E-value=2.5 Score=36.60 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=34.9
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+++.|++++++++|+.|..++ . .|.+. +|+++.+|.+|.|+..
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~~---~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQA---H-----TVALS---DGRTLPYGTLVLATGA 111 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTT---T-----EEEET---TSCEEECSEEEECCCE
T ss_pred HHHHCCCEEEcCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEECCCC
Confidence 4567899999999999998764 2 35553 7888999999998875
No 231
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=71.93 E-value=9.8 Score=33.12 Aligned_cols=53 Identities=8% Similarity=0.007 Sum_probs=37.4
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
...+.+.+++.|++++++++|..|..++ + .|.+....+|+ ++.+|.+|.|+..
T Consensus 59 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 59 RYMTGEKMESRGVNVFSNTEITAIQPKE---H-----QVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp BSCCHHHHHHTTCEEEETEEEEEEETTT---T-----EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCCHHHHHHCCCEEEECCEEEEEeCCC---C-----EEEEEecCCCceEEEeCCEEEEcCCC
Confidence 3344567788999999999999998775 3 24443212354 4889999998764
No 232
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=71.73 E-value=6.4 Score=34.40 Aligned_cols=52 Identities=8% Similarity=0.141 Sum_probs=37.6
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEec--CCCeEEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~--~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+++.|++++++++|+.|..++ + .|.+... ++++.+.+|.+|.|+..
T Consensus 62 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 62 YSSPEELSNLGANVQMRHQVTNVDPET---K-----TIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp SCCHHHHHHTTCEEEESEEEEEEEGGG---T-----EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCHHHHHHcCCEEEeCCEEEEEEcCC---C-----EEEEEecCCCceEEEECCEEEEccCC
Confidence 344667788999999999999998775 3 2444321 12567899999998864
No 233
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=71.32 E-value=5.4 Score=34.27 Aligned_cols=51 Identities=12% Similarity=0.091 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe----EEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~----~~~aD~vV~a~p~ 110 (231)
.+...+.+.+++.|++++.+ +|+++..++ + .|.+. +++ ++.+|.+|.|+..
T Consensus 57 ~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~---~-----~V~~~---~g~~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 57 ELKVDLSEALPEKGIQFQEG-TVEKIDAKS---S-----MVYYT---KPDGSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp CEEEEHHHHTGGGTCEEEEC-EEEEEETTT---T-----EEEEE---CTTSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHhhCCeEEEEe-eEEEEeCCC---C-----EEEEc---cCCcccceeeCCEEEECCCC
Confidence 45667888888999999988 999998765 2 35554 333 4889999999765
No 234
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=71.32 E-value=5.6 Score=35.80 Aligned_cols=54 Identities=6% Similarity=-0.015 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
+.+.+..+.++.|++++++++|++|..++ + . +.+....+| ..+.+|++|.|+..
T Consensus 60 ~~~~~~~~~~~~~i~~~~~~~V~~id~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 60 VLQTPESFKARFNVEVRVKHEVVAIDRAA---K--L---VTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp BCCCHHHHHHHHCCEEETTEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEEecCCCCeEEEECCEEEECCCC
Confidence 34445555666899999999999998875 3 2 333321124 37889999999765
No 235
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=71.23 E-value=2.4 Score=38.50 Aligned_cols=43 Identities=16% Similarity=0.121 Sum_probs=33.6
Q ss_pred HHCCcEEEc--CceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhH
Q 026885 58 TDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (231)
Q Consensus 58 ~~~Gg~i~~--~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~ 113 (231)
.+.++++.. +++|++|.-+ ||++. +|+.+++|.||+|+.+...
T Consensus 341 ~~~nV~lv~~~~~~I~~it~~----------gv~~~---dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 341 NRPNVEAVAIKENPIREVTAK----------GVVTE---DGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GSTTEEEEETTTSCEEEECSS----------EEEET---TCCEEECSEEEECCCBSCS
T ss_pred cCCCEEEEeCCCCCccEEecC----------eEEcC---CCCEEECCEEEECCccCcc
Confidence 355888886 8899998432 47774 8999999999999997643
No 236
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=69.99 E-value=8 Score=33.20 Aligned_cols=49 Identities=12% Similarity=0.013 Sum_probs=38.8
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.....+.+++.|+++++ ++|++|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 60 ~~~~~~~~~~~~i~~~~-~~v~~id~~~---~-----~v~~~---~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 60 MFRPEKFFQDQAIELIS-DRMVSIDREG---R-----KLLLA---SGTAIEYGHLVLATGA 108 (404)
T ss_dssp BSSCHHHHHHTTEEEEC-CCEEEEETTT---T-----EEEES---SSCEEECSEEEECCCE
T ss_pred cCCCHHHHHhCCCEEEE-EEEEEEECCC---C-----EEEEC---CCCEEECCEEEEeeCC
Confidence 34456778889999999 9999998775 2 35553 7888999999999764
No 237
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=68.43 E-value=7.8 Score=31.67 Aligned_cols=55 Identities=7% Similarity=-0.082 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.++..+.+..|..+...++ + ...+.+ .+|+++.+|.+|.|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~---~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 61 EFKEIGLNEVMKYPSVHYYEKTVVMITKQST--G---LFEIVT---KDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHHTTSTTEEEEECCEEEEEECTT--S---CEEEEE---TTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEEEeeecCC--C---cEEEEE---CCCCEEEeCEEEEccCC
Confidence 4566667777777877777777777766552 3 344555 38889999999998764
No 238
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=68.23 E-value=8.3 Score=31.17 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=39.2
Q ss_pred chhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
..+.+.+.+.+++.|++++++ +|.++ .+++ .+ + ..+.+. .++ .+.+|++|.|+..
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~--~-~~v~~~--~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DG--S-FTIKLE--GGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TS--C-EEEEET--TSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CC--c-EEEEEe--cCC-EEEeCEEEEeeCC
Confidence 367888889999999999999 99999 6541 01 1 232232 244 8899999999775
No 239
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=68.18 E-value=4.8 Score=35.20 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=32.6
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-eEEecCEEEEcCCh
Q 026885 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (231)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-~~~~aD~vV~a~p~ 110 (231)
+.++.|++++++++|+.+..++ ..|.+ .+| ..+.+|.+|.|+..
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~~--------~~v~~---~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTGY--------VRVRE---NGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSSE--------EEEEC---SSSEEEEECSEEEECCCE
T ss_pred HHHhcCcEEEecCEEEEEecCC--------CEEEE---CCceEEEEcCEEEECCCC
Confidence 3478999999999999996543 23433 255 47899999999764
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.49 E-value=7.7 Score=34.29 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=34.7
Q ss_pred HHHHHH-HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 53 IRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 53 l~~~l~-~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
..+.+. ..|++++++++|+.|..++ + .|.+....+|+ ++.+|.+|.|+..
T Consensus 98 ~~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 98 NVKTFRDKYGIDAKVRHEVTKVDTEK---K-----IVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CHHHHHHTTCCEEESSEEEEEEETTT---T-----EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CHHHHHhhcCCEEEeCCEEEEEECCC---C-----EEEEEEcCCCceEEEEcCEEEECCCC
Confidence 344554 4599999999999998775 3 24343112465 7899999999774
No 241
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=67.34 E-value=8.4 Score=34.14 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=36.8
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
...+.+++.|++++++++|+.|..++ + + |.+...++++++.+|.+|.|+..
T Consensus 97 ~~~~~~~~~gv~v~~~~~v~~i~~~~---~--~---v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 97 SDKEELESLGAKVYMESPVQSIDYDA---K--T---VTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp CCHHHHHHTTCEEETTCCEEEEETTT---T--E---EEEEETTEEEEEECSEEEECCCE
T ss_pred cCHHHHHhCCCEEEeCCEEEEEECCC---C--E---EEEEeCCcEEEEECCEEEECCCC
Confidence 44667788999999999999998765 3 2 33321112457899999998874
No 242
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=66.54 E-value=9.6 Score=33.46 Aligned_cols=49 Identities=10% Similarity=0.027 Sum_probs=29.8
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
..+.+..|++++++++|++|..++ + .+.+....+|+ .+.+|.+|.|+..
T Consensus 73 ~~~~~~~gi~~~~~~~V~~id~~~---~-----~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 73 EFFRINKDVEALVETRAHAIDRAA---H-----TVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp --------CEEECSEEEEEEETTT---T-----EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHhhhcCcEEEECCEEEEEECCC---C-----EEEEeecCCCCEEEEECCEEEEeCCC
Confidence 333346899999999999998875 3 23343112354 7889999998764
No 243
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=66.27 E-value=4.2 Score=36.29 Aligned_cols=41 Identities=7% Similarity=-0.009 Sum_probs=33.1
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.|++++++++|++|..++ . .|.+. +|+.+.+|.+|.|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~~---~-----~V~~~---~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD---N-----MVKLN---DGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG---T-----EEEET---TSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECCC---C-----EEEEC---CCCEEECCEEEECCCC
Confidence 5789999999999998875 2 35553 7888999999988763
No 244
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=65.76 E-value=13 Score=34.60 Aligned_cols=30 Identities=10% Similarity=-0.020 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHCC---cEEEcCceeeEEEecc
Q 026885 48 YLSGPIRKYITDKG---GRFHLRWGCREILYDK 77 (231)
Q Consensus 48 ~l~~~l~~~l~~~G---g~i~~~~~V~~i~~~~ 77 (231)
.+-+.|.+.+++.| ++|+++++|+.++.++
T Consensus 120 ~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 120 RIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 34577888888887 8999999999999864
No 245
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=65.46 E-value=45 Score=26.74 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=41.5
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCCeEEecCEEEEcCCh
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDV 110 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~--~~~g~~~~aD~vV~a~p~ 110 (231)
.+...+.....+.+++.++.+.++...+ + ...++.+.. ..+++++++|.|+.++..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~--~~~~~~~~~~~~~~~~~i~~d~vi~a~G~ 248 (314)
T 4a5l_A 191 KTMQERVLNHPKIEVIWNSELVELEGDG---D--LLNGAKIHNLVSGEYKVVPVAGLFYAIGH 248 (314)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred chhhhhhhcccceeeEeeeeeEEEEeee---e--ccceeEEeecccccceeeccccceEeccc
Confidence 3445566677788999999999998776 3 456666653 345678999999999875
No 246
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=62.30 E-value=15 Score=32.82 Aligned_cols=63 Identities=8% Similarity=-0.069 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCC--CcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAAN--AETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~--~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
.+.+=+..+.++.+..|++|++|++++..+++. +....+.|++.++..| +++.|++||+++..
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 355556666667778899999999998765300 1001355655533233 46789999999874
No 247
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=62.12 E-value=10 Score=32.81 Aligned_cols=37 Identities=11% Similarity=0.159 Sum_probs=28.6
Q ss_pred eeeeCCCCcchhHHHHHHHHHHCCcEEEcCceeeEEEeccC
Q 026885 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKA 78 (231)
Q Consensus 38 ~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~ 78 (231)
..-..|+.. .|.++|++.+ +.+|++|++|++|...++
T Consensus 312 ~~~i~GG~~-~l~~~l~~~l---~~~i~l~~~V~~I~~~~~ 348 (376)
T 2e1m_A 312 YWEIEGGSR-MLPETLAKDL---RDQIVMGQRMVRLEYYDP 348 (376)
T ss_dssp EEEETTCTT-HHHHHHHHHG---GGTEECSEEEEEEEECCC
T ss_pred eEEECCcHH-HHHHHHHHhc---CCcEEecCeEEEEEECCC
Confidence 333456654 6899999887 568999999999998863
No 248
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=60.68 E-value=12 Score=30.21 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++.|.+++.++ |..+....+ + ..+.+ .+++.+.+|.+|.|+..
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~----~~~~~---~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQ--P----FKLFT---EEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSS--S----EEEEE---TTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCC--c----eEEEE---CCCeEEEEeEEEEcccc
Confidence 567888899999999987655 555555541 2 23334 37888999999998764
No 249
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=60.15 E-value=15 Score=31.15 Aligned_cols=44 Identities=16% Similarity=0.010 Sum_probs=33.4
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
.+.+.|++++.+ +|++|..++ + .|.+ .+|+++.+|++|.|+...
T Consensus 64 ~~~~~gv~~i~~-~v~~id~~~---~-----~v~~---~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 64 GLRAHGIQVVHD-SALGIDPDK---K-----LVKT---AGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHHTTCEEECS-CEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEEe-EEEEEEccC---c-----EEEe---cccceeecceeeeccCCc
Confidence 445689998765 799998875 3 2445 388899999999998753
No 250
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=58.59 E-value=6.4 Score=35.76 Aligned_cols=46 Identities=9% Similarity=-0.026 Sum_probs=34.1
Q ss_pred HHHHHHCCcEEE--cCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhH
Q 026885 54 RKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (231)
Q Consensus 54 ~~~l~~~Gg~i~--~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~ 113 (231)
.+.+.+.++++. ..++|++|.-+ ||++. +| .+++|.||+|+.+...
T Consensus 350 ~~al~~~~V~lvd~~~~~I~~it~~----------gv~~~---dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 350 YETYNRDNVELVDLRSTPIVGMDET----------GIVTT---GA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGGGGSTTEEEEETTTSCEEEEETT----------EEEES---SC-EEECSEEEECCCEEES
T ss_pred HHHhcCCCEEEEeCCCCCceEEeCC----------cEEeC---CC-ceecCEEEECCccccc
Confidence 344556688887 46889998532 47774 78 8999999999998643
No 251
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.13 E-value=16 Score=31.80 Aligned_cols=49 Identities=8% Similarity=0.019 Sum_probs=33.6
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC-eEEecCEEEEcCCh
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g-~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+++.|++++.++.+. + +. + . ..|.+ .+| +.+.+|.+|.|+..
T Consensus 94 ~~~~~~~~~~~gv~~~~g~~~~-i--d~---~--~-v~V~~---~~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 94 TGGVEGLLKGNKVEIVKGEAYF-V--DA---N--T-VRVVN---GDSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHHHHHTTTCEEEESEEEE-E--ET---T--E-EEEEE---TTEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEEEEEE-c--cC---C--e-EEEEe---CCCcEEEEeCEEEEecCC
Confidence 3445677888999999999764 3 33 2 2 33443 256 67899999998864
No 252
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=56.04 E-value=3.4 Score=34.58 Aligned_cols=44 Identities=16% Similarity=0.065 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+...|.+.++++|++|+. ++|++|...+ .+.||.||.|.....
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--------------------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--------------------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--------------------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--------------------cCCCCEEEECCCcCh
Confidence 5778999999999999998 8998875432 135788888877654
No 253
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.97 E-value=7.1 Score=33.84 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+...+.+.+++.|++++.+ +|+.|..++ + .|.+. +|+.+.+|.+|.|+..
T Consensus 58 ~~~~~~~~~~~~gv~~~~~-~v~~id~~~---~-----~v~~~---~g~~i~~d~liiAtG~ 107 (430)
T 3h28_A 58 ISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTTQ---SGKKIEYDYLVIATGP 107 (430)
T ss_dssp SEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEET---TCCEEECSEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEEE-EEEEEECCC---C-----EEEEC---CCcEEECCEEEEcCCc
Confidence 3445566777899999975 999998765 2 35553 7788999999998764
No 254
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.36 E-value=19 Score=31.38 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
+.+.+.+++.|++++.++.+. .+. + . ..|.+ .+| +++.+|.+|.|+..
T Consensus 95 ~~l~~~~~~~gv~~~~g~~~~---id~---~--~-v~V~~---~~G~~~~~~~d~lViAtG~ 144 (464)
T 2a8x_A 95 AGVHFLMKKNKITEIHGYGTF---ADA---N--T-LLVDL---NDGGTESVTFDNAIIATGS 144 (464)
T ss_dssp HHHHHHHHHTTCEEECEEEEE---SSS---S--E-EEEEE---TTSCCEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC---C--e-EEEEe---CCCceEEEEcCEEEECCCC
Confidence 445677888999999998764 343 2 2 23443 256 68899999998865
No 255
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.20 E-value=21 Score=31.15 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=32.8
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
+.+.+.+++.|++++.++.+. + +. + . ..|.+ .+| +.+.+|.+|.|+..
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~-~--~~---~--~-~~v~~---~~G~~~~i~~d~lIiAtGs 149 (470)
T 1dxl_A 100 RGIEGLFKKNKVTYVKGYGKF-V--SP---S--E-ISVDT---IEGENTVVKGKHIIIATGS 149 (470)
T ss_dssp HHHHHHHHHHTCEEEESCEEE-E--ET---T--E-EEECC---SSSCCEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEEEE-e--cC---C--E-EEEEe---CCCceEEEEcCEEEECCCC
Confidence 345667788899999999764 3 33 2 1 23333 255 68899999998764
No 256
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=49.90 E-value=17 Score=32.15 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=34.1
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
+.+.+.+ +.|++++++++|.+|..++ + .+.-.... +++ .+.+|.+|.|+..
T Consensus 165 ~~l~~~l-~~~v~~~~~~~v~~i~~~~---~--~~~~~~~~---~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 165 EELVGKL-NENTKIYLETSALGVFDKG---E--YFLVPVVR---GDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHTC-CTTEEEETTEEECCCEECS---S--SEEEEEEE---TTEEEEEEESCEEECCCE
T ss_pred HHHHHHH-hcCCEEEcCCEEEEEEcCC---c--EEEEEEec---CCeEEEEECCEEEECCCC
Confidence 3434434 5699999999999998875 3 23222222 454 6789999999764
No 257
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=46.43 E-value=22 Score=31.05 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=33.1
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eE------EecCEEEEcCChh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KV------VQADAYVAACDVP 111 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~------~~aD~vV~a~p~~ 111 (231)
+.+.+.+++.|++++.++.+.. +. + -..|.+. +| +. +.+|.+|.|+...
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~~---~~---~---~v~V~~~---~G~~~~~~~~~~i~~d~lViAtGs~ 156 (478)
T 1v59_A 100 GGIELLFKKNKVTYYKGNGSFE---DE---T---KIRVTPV---DGLEGTVKEDHILDVKNIIVATGSE 156 (478)
T ss_dssp HHHHHHHHHTTCEEEESEEEES---SS---S---EEEEECC---TTCTTCCSSCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEEEEEEc---cC---C---eEEEEec---CCCcccccccceEEeCEEEECcCCC
Confidence 3456677889999999998752 33 2 2234332 44 46 8999999998753
No 258
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=45.28 E-value=13 Score=30.41 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=28.9
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChh
Q 026885 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+.|+ +..+.+|+++..+ ++.+. +|+++++|.||.++...
T Consensus 246 ~~g~-i~~~~~v~~~~~~----------~v~~~---~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 246 ARGV-LAAVPPPARFSPT----------GMQWA---DGTERAFDAVIWCTGFR 284 (357)
T ss_dssp HTTC-CCEECCCSEEETT----------EEECT---TSCEEECSEEEECCCBC
T ss_pred hcCc-eEEecCcceEeCC----------eeEEC---CCCEecCCEEEECCCcC
Confidence 4555 7788888887532 36563 88899999999998863
No 259
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=44.51 E-value=18 Score=32.41 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=33.9
Q ss_pred HHHHHHHHCCcEEE--cCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 52 PIRKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~--~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
...+.+.+.++++. .+++|++|. + .+|++. + +.+++|.||.|+.+..
T Consensus 343 ~y~~~~~~~~v~lv~~~~~~i~~i~--~--------~gv~~~---d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 343 DYYEMFNRDNVHLVDTLSAPIETIT--P--------RGVRTS---E-REYELDSLVLATGFDA 391 (542)
T ss_dssp SHHHHTTSTTEEEEETTTSCEEEEC--S--------SEEEES---S-CEEECSEEEECCCCCC
T ss_pred cHHHHhCCCCEEEEecCCCCceEEc--C--------CeEEeC---C-eEEecCEEEEcCCccc
Confidence 34455555667776 478899984 2 247774 6 8899999999998764
No 260
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=43.35 E-value=29 Score=30.49 Aligned_cols=48 Identities=10% Similarity=0.020 Sum_probs=31.8
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC------------eEEecCEEEEcCChh
Q 026885 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK------------KVVQADAYVAACDVP 111 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g------------~~~~aD~vV~a~p~~ 111 (231)
.+.+.+++.|++++.++.+. .++ + . ..|... +| +++.+|.+|.|+...
T Consensus 100 ~~~~~~~~~gv~~~~g~~~~---~~~---~--~-v~v~~~---~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 100 GLAGMAKSRKVDVIQGDGQF---LDP---H--H-LEVSLT---AGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHTTCEEEEEEEEE---EET---T--E-EEEEEE---EEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCcEEEeeEEEE---ccC---C--E-EEEEec---CCcccccccccCcceEEEcCEEEECCCCC
Confidence 35567788999999998765 233 2 2 233332 34 578899999887753
No 261
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=42.39 E-value=29 Score=30.29 Aligned_cols=48 Identities=8% Similarity=0.023 Sum_probs=32.8
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
+.+.+.+++.|++++.++.+. + +. + . ..|.+ .+| +.+.+|.+|.|+..
T Consensus 97 ~~~~~~~~~~~v~~~~g~~~~-i--~~---~--~-~~v~~---~~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 97 GGVEYLFKKNKVTYYKGEGSF-E--TA---H--S-IRVNG---LDGKQEMLETKKTIIATGS 146 (468)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE-E--ET---T--E-EEEEE---TTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-e--eC---C--E-EEEEe---cCCceEEEEcCEEEECCCC
Confidence 345677888999999998653 3 33 2 1 23433 256 67899999998764
No 262
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.27 E-value=71 Score=27.69 Aligned_cols=43 Identities=14% Similarity=0.300 Sum_probs=31.1
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.+.+++.|++++.++.+. + ++ . .|.+ +++.+.+|++|.|+..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~---~-----~v~v----~~~~~~~d~lviATGs 144 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG---K-----QVEV----DGQRIQCEHLLLATGS 144 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET---T-----EEEE----TTEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC---C-----EEEE----eeEEEEeCEEEEeCCC
Confidence 4567788999999998764 2 33 2 3555 3478899999999864
No 263
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=38.93 E-value=56 Score=28.41 Aligned_cols=43 Identities=7% Similarity=0.112 Sum_probs=30.7
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
+.+.+++.|++++.++.+. + +. + .|.+ +|+.+.+|.+|.|+..
T Consensus 99 ~~~~~~~~gv~~~~g~~~~-~--~~---~-----~v~v----~g~~~~~d~lViATGs 141 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL-V--GP---K-----EVEV----GGERYGAKSLILATGS 141 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE-E--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHhCCCEEEeeeEEE-c--cC---C-----EEEE----ccEEEEeCEEEEcCCC
Confidence 4556788999999998654 2 33 2 3545 3678899999998764
No 264
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=37.62 E-value=72 Score=25.63 Aligned_cols=52 Identities=15% Similarity=-0.029 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.....+...+.+..+..+..+....... . . +.. .+++++++|++|.|+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~-~~~---~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGAVYQYGDIKSVEDKGE---Y----K-VIN---FGNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEEECSS---C----E-EEE---CSSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhccccccceeeeeeeeeec---c----e-eec---cCCeEEEeceeEEcccC
Confidence 456677788888999999998888877654 2 1 223 27889999999999874
No 265
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=35.52 E-value=53 Score=28.87 Aligned_cols=54 Identities=13% Similarity=-0.022 Sum_probs=33.2
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
+.+.+.+++.|++++.++ ++.+..+++.++ +...|.. .+|+ .+.+|.+|.|+..
T Consensus 99 ~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~--~~~~V~~---~~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 99 ADITAQLLSMGVQVIAGR-GELIDSTPGLAR--HRIKATA---ADGSTSEHEADVVLVATGA 154 (499)
T ss_dssp HHHHHHHHHTTCEEEESE-EEECCSSSCCSS--EEEEEEC---TTSCEEEEEESEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEecCcccCCC--CEEEEEe---CCCcEEEEEeCEEEEcCCC
Confidence 345777888999999997 666654200001 1122332 2565 7899999988753
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=34.66 E-value=35 Score=29.77 Aligned_cols=48 Identities=8% Similarity=-0.131 Sum_probs=32.5
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeE--EecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV--VQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~--~~aD~vV~a~p~ 110 (231)
+.+.+.+++.|++++.+ +|+.+..+ ...|.. .+|+. +.+|++|.|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~id~~--------~~~V~~---~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIKDPT--------HVIVKT---DEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEEETT--------EEEEEE---TTSCEEEEEEEEEEECCCE
T ss_pred chHHHHHHhCCCEEEEe-EEEEecCC--------eEEEEc---CCCcEEEEecCEEEECCCC
Confidence 44555666789999888 67766422 133444 36777 899999999764
No 267
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=34.22 E-value=66 Score=31.23 Aligned_cols=57 Identities=9% Similarity=-0.031 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEe-----c-------CCCeEEecCEEEEcCCh
Q 026885 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK-----A-------TDKKVVQADAYVAACDV 110 (231)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~-----~-------~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+.+.+++. |++++++++|.+|..++ ++..+.... . .++..+.+|++|.|+..
T Consensus 182 ~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~------~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs 251 (965)
T 2gag_A 182 AWIEQVTSELAEAEETTHLQRTTVFGSYDAN------YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA 251 (965)
T ss_dssp HHHHHHHHHHHHSTTEEEESSEEEEEEETTT------EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEeeecCC------ceeeeEeecccccccccccCCCCceEEEECCEEEECCCC
Confidence 3455666777775 99999999999997543 343332110 0 11236889999999875
No 268
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=33.44 E-value=38 Score=29.68 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=31.3
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCe--EEecCEEEEcCCh
Q 026885 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (231)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~--~~~aD~vV~a~p~ 110 (231)
+.+.+.+++.|++++.++ ++.+ +. + + ..|.. .+|+ .+.+|.+|.|+..
T Consensus 109 ~~~~~~~~~~gv~~~~g~-~~~i--~~---~--~-~~v~~---~~g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 109 GIYQKNLEKEKVDVVFGW-ARFN--KD---G--N-VEVQK---RDNTTEVYSANHILVATGG 158 (479)
T ss_dssp HHHHHHHHHTTEEEEEEE-EEEC--TT---S--C-EEEEE---SSSCCEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEe--eC---C--E-EEEEe---CCCcEEEEEeCEEEEcCCC
Confidence 344566778999999885 5544 33 2 2 23433 2565 7889999998764
No 269
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=32.18 E-value=82 Score=27.36 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=30.2
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+++.|++++.++. +.+ +. . .|.+ +|+.+.+|.+|.|+..
T Consensus 97 ~~~~~~~~~gv~~~~g~~-~~i--~~---~-----~v~~----~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 97 FWDGYVERLGITRVDGHA-RFV--DA---H-----TIEV----EGQRLSADHIVIATGG 140 (463)
T ss_dssp HHHHHHHHTTCEEEESCE-EEE--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHHCCCEEEEeEE-EEc--cC---C-----EEEE----CCEEEEcCEEEECCCC
Confidence 345556788999999854 333 32 2 2544 6778899999998764
No 270
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=31.51 E-value=66 Score=28.32 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=30.6
Q ss_pred HHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC-----CeEEecCEEEEcCCh
Q 026885 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-----KKVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~-----g~~~~aD~vV~a~p~ 110 (231)
.+.+.+++. |++++.++ ++.+ +. . .|.+....+ ++.+.+|++|.|+..
T Consensus 112 ~~~~~l~~~~gv~~~~g~-~~~i--~~---~-----~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 112 SYEGMFNDTEGLDFFLGW-GSLE--SK---N-----VVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp HHHHHHHHCTTEEEEESE-EEEE--ET---T-----EEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCeEEEEeE-EEEe--eC---C-----EEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 344556778 99999986 5544 32 2 244431113 677899999998764
No 271
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=28.82 E-value=24 Score=29.72 Aligned_cols=50 Identities=16% Similarity=-0.027 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhhHhhhC
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLL 117 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~~~~Ll 117 (231)
.+.+.|.+.+++.|++|+++++|++|.... +++||.||.|...+...+.+
T Consensus 99 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--------------------~~~ad~vV~AdG~~S~R~~l 148 (381)
T 3c4a_A 99 GLVHALRDKCRSQGIAIRFESPLLEHGELP--------------------LADYDLVVLANGVNHKTAHF 148 (381)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCSGGGCC--------------------GGGCSEEEECCGGGGGTCCS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEeccchhcc--------------------cccCCEEEECCCCCchHHhh
Confidence 578889999999999999999998874210 23578888777765433333
No 272
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=28.58 E-value=77 Score=27.50 Aligned_cols=47 Identities=13% Similarity=0.066 Sum_probs=31.3
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCC-C-eEEecCEEEEcCCh
Q 026885 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-K-KVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~-g-~~~~aD~vV~a~p~ 110 (231)
.+.+.+++.|++++.++.+ .+ +. + + ..|.+ .+ | +++.+|.+|.|+..
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~~--~~---~--~-~~v~~---~~gg~~~~~~d~lViAtGs 150 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-IT--GK---N--Q-VTATK---ADGGTQVIDTKNILIATGS 150 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-EE--ET---T--E-EEEEC---TTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEEEEE-Ee--cC---C--E-EEEEe---cCCCcEEEEeCEEEECCCC
Confidence 3567788899999999754 23 33 2 1 23433 24 4 57899999998874
No 273
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=27.62 E-value=97 Score=26.73 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=30.2
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+++.|++++.++. +.+ +. . .|.+ +|+.+.+|.+|.|+..
T Consensus 98 ~~~~~~~~~~v~~~~g~~-~~i--~~---~-----~v~~----~g~~~~~d~lviAtGs 141 (450)
T 1ges_A 98 SYENVLGKNNVDVIKGFA-RFV--DA---K-----TLEV----NGETITADHILIATGG 141 (450)
T ss_dssp HHHHHHHHTTCEEEESCC-EEE--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEE-EEe--cC---C-----EEEE----CCEEEEeCEEEECCCC
Confidence 344556788999999864 334 32 2 2444 6778899999998764
No 274
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=25.89 E-value=73 Score=27.59 Aligned_cols=44 Identities=11% Similarity=-0.007 Sum_probs=29.0
Q ss_pred HHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCC--eEEecCEEEEcCCh
Q 026885 55 KYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (231)
Q Consensus 55 ~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g--~~~~aD~vV~a~p~ 110 (231)
+.+++. |++++.++ ++.+. . + ...|.+ .+| +.+.+|.+|.|+..
T Consensus 102 ~~~~~~~~v~~~~g~-~~~~~--~---~---~~~v~~---~~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 102 GILGGNPAITVVHGE-ARFKD--D---Q---SLTVRL---NEGGERVVMFDRCLVATGA 148 (467)
T ss_dssp HHHTTCTTEEEEEEE-EEEEE--T---T---EEEEEE---TTSSEEEEECSEEEECCCE
T ss_pred HHHhccCCeEEEEEE-EEEcc--C---C---EEEEEe---CCCceEEEEeCEEEEeCCC
Confidence 445566 99998874 66553 2 2 123444 266 67899999999874
No 275
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=25.30 E-value=43 Score=29.28 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=17.8
Q ss_pred EEEEEecCCCeEEecCEEEEcCChh
Q 026885 87 GLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 87 ~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
+|++. +|+++++|.||.++...
T Consensus 254 ~V~~~---dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 254 NAYFA---DGSSEKVDAIILCTGYI 275 (464)
T ss_dssp EEEET---TSCEEECSEEEECCCBC
T ss_pred EEEEC---CCCEEeCCEEEECCCCC
Confidence 36664 88889999999999864
No 276
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=25.23 E-value=27 Score=29.04 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCChhh
Q 026885 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (231)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~~~ 112 (231)
.+...|.+.++++|++|+. ++|++|..+ . + .||.||.|.....
T Consensus 143 ~~~~~l~~~~~~~G~~i~~-~~v~~l~~~--------------~------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 143 KYCQYLARELQKLGATFER-RTVTSLEQA--------------F------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCSBGGGT--------------C------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEcccHhhc--------------C------c-CCCEEEECCCcch
Confidence 5788999999999999998 999887321 0 1 6888888877654
No 277
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=25.01 E-value=86 Score=27.77 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=29.5
Q ss_pred HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
++.|++++++.+|+.+.. + .|.+ +|+.+.+|.+|.|+..
T Consensus 146 ~~~gv~~~~~~~v~~i~~-----~-----~v~~----~g~~~~~d~lViATGs 184 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN-----H-----TVEA----AGKVFKAKNLILAVGA 184 (523)
T ss_dssp HTSCCCEEESSCCEEEET-----T-----EEEE----TTEEEEBSCEEECCCE
T ss_pred ccCCcEEEEeeEEEEeeC-----C-----EEEE----CCEEEEeCEEEECCCC
Confidence 778999998888887742 2 2444 4778999999998764
No 278
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=24.74 E-value=1.2e+02 Score=26.62 Aligned_cols=48 Identities=13% Similarity=0.201 Sum_probs=30.6
Q ss_pred HHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEEe--cCCC---eEEecCEEEEcCCh
Q 026885 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDK---KVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~--~~~g---~~~~aD~vV~a~p~ 110 (231)
.+.+.+++. |++++.++ ++.+ +. + .+.+.. ..+| +.+.+|.+|.|+..
T Consensus 108 ~~~~~l~~~~gv~~~~g~-~~~i--~~---~-----~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 108 SYEGMFADTEGLTFHQGF-GALQ--DN---H-----TVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp HHHHHHHTSTTEEEEESE-EEEE--ET---T-----EEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCcEEEEeE-EEEe--eC---C-----EEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 445566778 99999997 5555 32 2 233421 0145 67899999988764
No 279
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=24.62 E-value=35 Score=29.13 Aligned_cols=29 Identities=10% Similarity=-0.054 Sum_probs=23.9
Q ss_pred CcchhHHHHHHHHHHCCcEEEcCceeeEE
Q 026885 45 PDVYLSGPIRKYITDKGGRFHLRWGCREI 73 (231)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i 73 (231)
+...+.+.+.+.++++|++++++++|++|
T Consensus 186 ~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 186 LDRDGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 34456778889999999999999998776
No 280
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=24.44 E-value=63 Score=27.90 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=31.2
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+.+++.|++++.++.+. .+. + .+.+.. +|+.+.+|.+|.|+..
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~---~-----~~~v~~--~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE---R-----KVLVEE--TGEELEARYILIATGS 139 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS---S-----EEEETT--TCCEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC---C-----eEEEee--CCEEEEecEEEECCCC
Confidence 34567788899999998653 333 2 233421 4678899999998864
No 281
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=23.60 E-value=82 Score=20.32 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.4
Q ss_pred HHHHHHHHHHCCcEEEc
Q 026885 50 SGPIRKYITDKGGRFHL 66 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~ 66 (231)
.+.+.+.+++.||++.-
T Consensus 23 ~~~l~~~i~~~GG~~~~ 39 (92)
T 4id3_A 23 RLQLHEMIVLHGGKFLH 39 (92)
T ss_dssp HHHHHHHHHHTTCEEES
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 46799999999999863
No 282
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=23.42 E-value=1.2e+02 Score=26.32 Aligned_cols=48 Identities=8% Similarity=-0.058 Sum_probs=30.8
Q ss_pred HHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEEecCCCeEEecCEEEEcCCh
Q 026885 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (231)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~~~aD~vV~a~p~ 110 (231)
.+.+...++..|++++.++ ++.+ +. . . ..|.. +|+.+.+|.+|.|+..
T Consensus 111 ~~~~~~~~~~~gv~~~~g~-~~~~--~~---~--~-~~v~~----~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 111 NAIYQNNLTKSHIEIIRGH-AAFT--SD---P--K-PTIEV----SGKKYTAPHILIATGG 158 (478)
T ss_dssp HHHHHHHHHHTTCEEEESC-EEEC--SC---S--S-CEEEE----TTEEEECSCEEECCCE
T ss_pred HHHHHHHHHhCCcEEEEeE-EEEe--eC---C--e-EEEEE----CCEEEEeeEEEEccCC
Confidence 3445566778899998885 2222 22 1 1 23433 7888999999998753
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=21.42 E-value=72 Score=27.44 Aligned_cols=35 Identities=9% Similarity=-0.076 Sum_probs=23.0
Q ss_pred cCceeeEEEeccCCCCcceEEEEEEEecCCCeE-EecCEEEEcCChh
Q 026885 66 LRWGCREILYDKAANAETYVKGLAMSKATDKKV-VQADAYVAACDVP 111 (231)
Q Consensus 66 ~~~~V~~i~~~~~~~~~~~v~~v~~~~~~~g~~-~~aD~vV~a~p~~ 111 (231)
++.+|++|..++ + +|.+. +|+. +.+|.||.++...
T Consensus 256 ~~~~v~~~~~~~---~-----~v~~~---dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 256 QVPEITKFDPTT---R-----EIYLK---GGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EECCEEEEETTT---T-----EEEET---TTEEECCCSEEEECCCBC
T ss_pred EecCeEEEecCC---C-----EEEEC---CCCEeccCCEEEECCCCC
Confidence 345666665332 2 46664 7876 6899999998753
No 284
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=20.33 E-value=41 Score=29.81 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=26.6
Q ss_pred EEEcCceeeEEEeccCCCCcceEE-----------EEEEEecCCCeEEecCEEEEcCChh
Q 026885 63 RFHLRWGCREILYDKAANAETYVK-----------GLAMSKATDKKVVQADAYVAACDVP 111 (231)
Q Consensus 63 ~i~~~~~V~~i~~~~~~~~~~~v~-----------~v~~~~~~~g~~~~aD~vV~a~p~~ 111 (231)
++..+..|..+..... .+ ++. ++.. ++|+++++|.||+|+.++
T Consensus 355 ~l~~~~~v~~~~~~~~-~~--~~~v~~~~~~~~~~~v~~---~dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 355 RILPERKITRVEHHGP-QS--RMRIHLKSSKPESEGAAN---DVKETLEVDALMVATGYN 408 (501)
T ss_dssp EEECSEEEEEEECCSS-SS--CEEEEEEESCC-----------CCCEEEESEEEECCCEE
T ss_pred eecCCcceeeeeecCC-CC--eEEEEeeeeEEeCCeeEe---CCCeEEECCEEEECcCCC
Confidence 5677777777765442 12 221 2223 478899999999999974
Done!