Query 026886
Match_columns 231
No_of_seqs 193 out of 1107
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 00:38:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f7f_A Nicotinate phosphoribos 100.0 5.5E-51 1.9E-55 390.9 19.3 220 1-229 238-465 (494)
2 3dhf_A Nicotinamide phosphorib 100.0 2.1E-35 7.2E-40 282.6 11.7 156 23-207 308-482 (484)
3 2i1o_A Nicotinate phosphoribos 100.0 2.8E-34 9.4E-39 268.9 15.6 168 3-214 222-396 (398)
4 2i14_A Nicotinate-nucleotide p 100.0 2.5E-34 8.7E-39 268.8 14.2 169 3-214 219-393 (395)
5 2im5_A Nicotinate phosphoribos 100.0 9.7E-34 3.3E-38 265.0 6.8 123 4-137 253-388 (394)
6 1yir_A Naprtase 2, nicotinate 100.0 3.5E-33 1.2E-37 262.3 7.8 122 4-135 267-396 (408)
7 3os4_A Naprtase, nicotinate ph 100.0 7.3E-33 2.5E-37 260.3 9.7 120 4-133 262-386 (407)
8 4hl7_A Naprtase, nicotinate ph 100.0 4.5E-33 1.5E-37 264.2 7.0 121 4-134 272-405 (446)
9 1ybe_A Naprtase, nicotinate ph 100.0 6.5E-33 2.2E-37 263.3 6.0 111 21-139 307-430 (449)
10 1vlp_A Naprtase, nicotinate ph 100.0 5.2E-32 1.8E-36 256.6 3.3 121 4-135 286-421 (441)
11 2jbm_A Nicotinate-nucleotide p 99.2 2.7E-11 9.4E-16 109.4 7.3 81 22-116 218-298 (299)
12 3c2e_A Nicotinate-nucleotide p 98.7 8.1E-09 2.8E-13 93.0 5.1 75 22-107 220-294 (294)
13 3gnn_A Nicotinate-nucleotide p 98.6 1.4E-07 4.8E-12 85.6 8.2 69 22-107 230-298 (298)
14 3paj_A Nicotinate-nucleotide p 98.5 1.9E-07 6.6E-12 85.4 8.0 69 22-107 252-320 (320)
15 2b7n_A Probable nicotinate-nuc 98.4 3.4E-07 1.2E-11 81.4 6.4 70 22-105 203-272 (273)
16 1qap_A Quinolinic acid phospho 98.1 3E-06 1E-10 76.5 5.7 67 22-105 229-295 (296)
17 1qpo_A Quinolinate acid phosph 97.4 0.00054 1.8E-08 61.4 8.6 70 22-105 215-284 (284)
18 3tqv_A Nicotinate-nucleotide p 97.1 0.001 3.4E-08 60.0 7.2 68 22-106 219-286 (287)
19 3l0g_A Nicotinate-nucleotide p 96.9 0.0031 1E-07 57.2 8.6 67 22-105 228-294 (300)
20 1o4u_A Type II quinolic acid p 96.8 0.0017 5.8E-08 58.3 6.0 71 22-106 214-284 (285)
21 1x1o_A Nicotinate-nucleotide p 95.8 0.03 1E-06 50.1 8.3 46 57-107 240-285 (286)
22 3f4w_A Putative hexulose 6 pho 89.7 0.47 1.6E-05 38.7 5.3 37 56-94 158-194 (211)
23 2yxb_A Coenzyme B12-dependent 87.4 2.7 9.1E-05 33.8 8.3 67 15-90 65-132 (161)
24 2v82_A 2-dehydro-3-deoxy-6-pho 86.1 0.72 2.5E-05 37.8 4.3 35 57-93 148-182 (212)
25 3hgj_A Chromate reductase; TIM 85.7 2.5 8.4E-05 38.0 8.0 76 5-94 238-325 (349)
26 3khj_A Inosine-5-monophosphate 84.8 3.8 0.00013 37.3 8.9 39 58-98 208-247 (361)
27 3l5l_A Xenobiotic reductase A; 84.5 2.2 7.4E-05 38.6 7.1 76 5-94 245-332 (363)
28 3ctl_A D-allulose-6-phosphate 83.1 1.6 5.4E-05 37.4 5.3 49 35-93 153-202 (231)
29 1wa3_A 2-keto-3-deoxy-6-phosph 83.0 0.53 1.8E-05 38.3 2.1 36 55-92 148-183 (205)
30 1y0e_A Putative N-acetylmannos 82.7 3.1 0.00011 34.0 6.8 34 57-92 175-209 (223)
31 1z41_A YQJM, probable NADH-dep 82.5 2.9 9.9E-05 37.2 7.0 76 5-94 228-314 (338)
32 3gr7_A NADPH dehydrogenase; fl 80.8 2.9 9.8E-05 37.6 6.3 76 5-94 228-314 (340)
33 2yw3_A 4-hydroxy-2-oxoglutarat 79.4 1 3.6E-05 37.6 2.7 36 55-92 149-184 (207)
34 3ffs_A Inosine-5-monophosphate 78.8 6.7 0.00023 36.4 8.3 41 56-98 245-286 (400)
35 3gka_A N-ethylmaleimide reduct 78.4 2.8 9.5E-05 38.3 5.5 36 58-94 288-323 (361)
36 2r14_A Morphinone reductase; H 78.3 2.9 0.0001 38.1 5.6 76 5-94 254-335 (377)
37 4ab4_A Xenobiotic reductase B; 78.1 2.9 0.0001 38.1 5.5 36 58-94 280-315 (362)
38 1rpx_A Protein (ribulose-phosp 78.0 2.9 9.8E-05 34.6 5.0 50 35-94 165-214 (230)
39 2gou_A Oxidoreductase, FMN-bin 77.8 4.4 0.00015 36.7 6.6 75 5-93 249-328 (365)
40 1ep3_A Dihydroorotate dehydrog 77.1 3.1 0.00011 35.7 5.2 35 57-93 241-276 (311)
41 1vyr_A Pentaerythritol tetrani 77.0 5 0.00017 36.3 6.7 75 5-93 250-329 (364)
42 4fo4_A Inosine 5'-monophosphat 76.3 7.9 0.00027 35.4 7.9 40 57-98 211-251 (366)
43 3q58_A N-acetylmannosamine-6-p 76.3 2.9 9.9E-05 35.6 4.7 34 57-92 181-215 (229)
44 1mxs_A KDPG aldolase; 2-keto-3 76.2 4.9 0.00017 34.1 6.1 37 54-93 163-200 (225)
45 3igs_A N-acetylmannosamine-6-p 76.1 3.6 0.00012 35.0 5.2 34 57-92 181-215 (232)
46 1h5y_A HISF; histidine biosynt 74.6 2.6 8.8E-05 34.5 3.8 35 57-93 198-233 (253)
47 3kru_A NADH:flavin oxidoreduct 73.6 8.7 0.0003 34.6 7.4 73 5-94 229-314 (343)
48 3inp_A D-ribulose-phosphate 3- 73.6 3 0.0001 36.2 4.1 50 35-94 181-230 (246)
49 1vrd_A Inosine-5'-monophosphat 73.2 12 0.00042 34.6 8.5 40 57-98 340-380 (494)
50 1vc4_A Indole-3-glycerol phosp 73.1 5.7 0.00019 34.3 5.8 65 18-94 173-243 (254)
51 1yxy_A Putative N-acetylmannos 72.7 2.1 7.3E-05 35.4 2.9 34 57-92 186-220 (234)
52 3qja_A IGPS, indole-3-glycerol 70.9 3.2 0.00011 36.4 3.7 36 57-94 213-249 (272)
53 1yad_A Regulatory protein TENI 70.7 1.8 6E-05 35.7 1.9 35 57-93 164-198 (221)
54 2xgg_A Microneme protein 2; A/ 70.3 10 0.00034 29.7 6.2 38 53-90 120-163 (178)
55 3cu2_A Ribulose-5-phosphate 3- 70.2 4.5 0.00015 34.8 4.4 47 37-93 175-223 (237)
56 1eep_A Inosine 5'-monophosphat 70.0 12 0.00042 33.8 7.6 39 57-97 256-295 (404)
57 3t7v_A Methylornithine synthas 68.9 27 0.00092 30.5 9.3 73 6-88 94-170 (350)
58 2fli_A Ribulose-phosphate 3-ep 67.7 4.3 0.00015 33.0 3.6 35 57-93 170-204 (220)
59 1tqx_A D-ribulose-5-phosphate 67.1 6.4 0.00022 33.5 4.7 35 57-93 173-207 (227)
60 1tqj_A Ribulose-phosphate 3-ep 67.0 5 0.00017 33.8 4.0 51 34-94 158-208 (230)
61 1vhc_A Putative KHG/KDPG aldol 66.3 4.6 0.00016 34.3 3.6 38 54-93 154-191 (224)
62 4e38_A Keto-hydroxyglutarate-a 66.3 4.7 0.00016 34.8 3.7 37 54-92 171-207 (232)
63 1geq_A Tryptophan synthase alp 66.2 5.1 0.00018 33.3 3.9 35 57-93 191-226 (248)
64 2tps_A Protein (thiamin phosph 65.7 3.3 0.00011 33.8 2.6 35 57-93 172-206 (227)
65 1xi3_A Thiamine phosphate pyro 65.6 2.3 8E-05 34.3 1.6 35 57-93 162-196 (215)
66 1wbh_A KHG/KDPG aldolase; lyas 65.5 4.5 0.00015 34.0 3.4 38 54-93 153-190 (214)
67 4avf_A Inosine-5'-monophosphat 64.7 26 0.0009 32.8 8.9 40 57-98 332-372 (490)
68 1ps9_A 2,4-dienoyl-COA reducta 62.8 7.3 0.00025 37.4 4.7 76 5-94 227-317 (671)
69 3b0p_A TRNA-dihydrouridine syn 62.4 20 0.00068 32.1 7.3 36 56-94 196-232 (350)
70 3lab_A Putative KDPG (2-keto-3 61.6 5.7 0.0002 34.1 3.4 37 54-92 156-192 (217)
71 2hsa_B 12-oxophytodienoate red 61.5 27 0.00092 32.0 8.1 36 58-94 320-355 (402)
72 2qr6_A IMP dehydrogenase/GMP r 61.3 23 0.00077 31.9 7.5 45 57-103 277-322 (393)
73 3ibs_A Conserved hypothetical 61.2 19 0.00066 28.4 6.3 36 54-89 110-150 (218)
74 1jub_A Dihydroorotate dehydrog 61.0 20 0.00067 30.9 6.8 34 57-92 242-276 (311)
75 1jcn_A Inosine monophosphate d 60.5 35 0.0012 31.8 8.9 45 57-104 358-403 (514)
76 3aty_A Tcoye, prostaglandin F2 60.4 8.8 0.0003 35.0 4.6 36 57-93 307-342 (379)
77 3l5a_A NADH/flavin oxidoreduct 60.0 18 0.00061 33.5 6.7 76 5-94 263-353 (419)
78 3ceu_A Thiamine phosphate pyro 60.0 5.2 0.00018 32.9 2.8 36 56-93 143-178 (210)
79 2w6r_A Imidazole glycerol phos 59.6 8.7 0.0003 32.2 4.1 70 7-93 157-235 (266)
80 1vzw_A Phosphoribosyl isomeras 59.5 18 0.00061 29.9 6.0 35 57-93 190-228 (244)
81 3usb_A Inosine-5'-monophosphat 59.4 39 0.0013 31.9 9.0 39 57-97 359-398 (511)
82 4af0_A Inosine-5'-monophosphat 58.9 16 0.00056 35.6 6.3 94 6-108 280-379 (556)
83 1h1y_A D-ribulose-5-phosphate 58.0 3.9 0.00013 34.1 1.6 36 57-94 173-208 (228)
84 2zbt_A Pyridoxal biosynthesis 57.7 8.2 0.00028 33.3 3.7 33 59-93 211-244 (297)
85 2qjg_A Putative aldolase MJ040 57.3 33 0.0011 28.8 7.4 68 10-94 170-244 (273)
86 2e6f_A Dihydroorotate dehydrog 55.8 18 0.00062 31.2 5.6 35 56-92 243-278 (314)
87 1n3y_A Integrin alpha-X; alpha 55.6 28 0.00094 27.1 6.3 38 53-90 108-152 (198)
88 3bo9_A Putative nitroalkan dio 55.3 30 0.001 30.5 7.1 38 57-96 176-214 (326)
89 4hqf_A Thrombospondin-related 55.3 23 0.0008 29.8 6.2 36 54-89 127-168 (281)
90 3ajx_A 3-hexulose-6-phosphate 55.3 5.1 0.00017 32.3 1.9 36 57-94 158-193 (207)
91 1icp_A OPR1, 12-oxophytodienoa 55.2 10 0.00034 34.5 4.0 36 58-94 302-337 (376)
92 1mzh_A Deoxyribose-phosphate a 55.0 89 0.0031 25.9 9.7 70 7-88 133-205 (225)
93 1ijb_A VON willebrand factor; 54.3 10 0.00034 30.4 3.5 37 53-89 113-157 (202)
94 3bw2_A 2-nitropropane dioxygen 54.2 8.5 0.00029 34.4 3.4 38 57-96 208-246 (369)
95 3o63_A Probable thiamine-phosp 51.9 4.5 0.00015 34.8 1.1 36 57-94 191-226 (243)
96 4f8x_A Endo-1,4-beta-xylanase; 51.9 11 0.00036 34.1 3.6 70 39-109 155-247 (335)
97 2z6i_A Trans-2-enoyl-ACP reduc 51.8 39 0.0013 29.6 7.2 38 57-96 162-200 (332)
98 2b2x_A Integrin alpha-1; compu 51.5 28 0.00095 28.0 5.8 38 53-90 122-165 (223)
99 1mf7_A Integrin alpha M; cell 51.2 16 0.00055 28.6 4.2 38 53-90 104-148 (194)
100 1w32_A Endo-1,4-beta-xylanase 50.5 28 0.00094 31.2 6.1 66 38-109 160-249 (348)
101 4fxs_A Inosine-5'-monophosphat 49.9 44 0.0015 31.4 7.6 40 57-98 334-374 (496)
102 3niy_A Endo-1,4-beta-xylanase; 48.6 30 0.001 31.1 6.1 64 39-109 172-258 (341)
103 2y88_A Phosphoribosyl isomeras 47.4 18 0.00063 29.6 4.1 71 7-93 150-231 (244)
104 3n2n_F Anthrax toxin receptor 47.3 33 0.0011 26.2 5.4 33 55-87 106-146 (185)
105 1ka9_F Imidazole glycerol phos 47.1 40 0.0014 27.7 6.2 74 7-93 32-110 (252)
106 1ccw_A Protein (glutamate muta 46.1 50 0.0017 25.3 6.3 65 19-91 54-124 (137)
107 1f76_A Dihydroorotate dehydrog 46.0 81 0.0028 27.4 8.3 34 57-92 289-323 (336)
108 3tsm_A IGPS, indole-3-glycerol 45.9 16 0.00054 32.1 3.6 36 57-94 220-256 (272)
109 4adt_A Pyridoxine biosynthetic 45.4 23 0.00078 31.5 4.6 35 58-94 210-245 (297)
110 4hqo_A Sporozoite surface prot 44.8 43 0.0015 28.0 6.1 38 53-90 123-166 (266)
111 1shu_X Anthrax toxin receptor 44.6 66 0.0023 24.4 6.8 35 54-88 102-144 (182)
112 2gjl_A Hypothetical protein PA 44.5 14 0.00048 32.3 3.1 37 57-95 172-209 (328)
113 4a3u_A NCR, NADH\:flavin oxido 44.4 9.7 0.00033 34.3 2.1 75 6-94 241-322 (358)
114 3jr2_A Hexulose-6-phosphate sy 44.1 9.5 0.00032 31.5 1.8 35 57-93 166-200 (218)
115 1pt6_A Integrin alpha-1; cell 44.0 39 0.0013 26.8 5.6 37 53-89 107-149 (213)
116 1qo2_A Molecule: N-((5-phospho 42.8 51 0.0018 27.0 6.2 71 7-93 145-229 (241)
117 3iix_A Biotin synthetase, puta 42.6 76 0.0026 27.2 7.5 72 5-87 86-159 (348)
118 3tdn_A FLR symmetric alpha-bet 42.6 5.2 0.00018 33.5 0.0 36 57-94 200-236 (247)
119 4e38_A Keto-hydroxyglutarate-a 40.8 97 0.0033 26.4 7.8 64 5-80 45-108 (232)
120 1to3_A Putative aldolase YIHT; 40.8 53 0.0018 28.9 6.3 72 10-93 181-260 (304)
121 3r2g_A Inosine 5'-monophosphat 40.7 1.5E+02 0.0051 26.9 9.4 39 59-99 201-240 (361)
122 1rd5_A Tryptophan synthase alp 40.6 33 0.0011 28.8 4.8 35 57-93 201-236 (262)
123 1zfj_A Inosine monophosphate d 40.5 2.1E+02 0.0073 26.0 11.1 40 56-97 335-375 (491)
124 3kbq_A Protein TA0487; structu 39.9 76 0.0026 25.8 6.7 49 7-66 24-72 (172)
125 1v0l_A Endo-1,4-beta-xylanase 39.9 34 0.0012 30.2 4.9 49 39-93 151-211 (313)
126 1p0k_A Isopentenyl-diphosphate 39.7 67 0.0023 28.2 6.8 36 56-93 250-286 (349)
127 3o74_A Fructose transport syst 38.9 75 0.0026 25.3 6.5 57 9-70 109-165 (272)
128 1v7p_C Integrin alpha-2; snake 38.6 56 0.0019 25.6 5.6 36 53-88 106-147 (200)
129 2nv1_A Pyridoxal biosynthesis 38.5 21 0.0007 31.1 3.2 33 59-93 211-244 (305)
130 1me8_A Inosine-5'-monophosphat 38.2 51 0.0017 30.8 6.1 73 6-87 241-314 (503)
131 3emz_A Xylanase, endo-1,4-beta 38.1 49 0.0017 29.5 5.7 65 39-109 157-242 (331)
132 1ka9_F Imidazole glycerol phos 37.9 39 0.0013 27.7 4.7 36 57-94 196-232 (252)
133 1wa3_A 2-keto-3-deoxy-6-phosph 37.4 1.5E+02 0.0052 23.4 8.5 73 4-90 20-92 (205)
134 3nzn_A Glutaredoxin; structura 37.1 1.1E+02 0.0037 21.5 7.8 66 6-75 33-101 (103)
135 1atz_A VON willebrand factor; 36.8 87 0.003 24.2 6.4 36 54-89 107-146 (189)
136 2d1z_A Endo-1,4-beta-D-xylanas 36.1 19 0.00064 32.9 2.6 49 39-93 151-211 (436)
137 1mxs_A KDPG aldolase; 2-keto-3 35.8 70 0.0024 26.8 6.0 27 5-31 37-63 (225)
138 1tv5_A Dhodehase, dihydroorota 35.3 1.7E+02 0.006 27.2 9.2 34 57-92 373-407 (443)
139 1n82_A Xylanase, intra-cellula 35.2 37 0.0013 30.0 4.4 48 39-92 158-215 (331)
140 1thf_D HISF protein; thermophI 35.2 1.6E+02 0.0055 23.9 8.1 78 7-93 31-109 (253)
141 1gox_A (S)-2-hydroxy-acid oxid 34.1 71 0.0024 28.6 6.2 34 57-92 280-314 (370)
142 1r30_A Biotin synthase; SAM ra 33.8 1.3E+02 0.0044 26.3 7.7 74 6-88 102-179 (369)
143 1h5y_A HISF; histidine biosynt 33.2 1.2E+02 0.0042 24.2 7.0 76 6-93 33-112 (253)
144 2p0o_A Hypothetical protein DU 32.8 66 0.0022 29.6 5.7 43 22-80 93-137 (372)
145 3tdn_A FLR symmetric alpha-bet 32.4 31 0.0011 28.6 3.2 72 7-93 36-114 (247)
146 3lab_A Putative KDPG (2-keto-3 31.8 1.6E+02 0.0054 25.0 7.6 64 5-80 24-87 (217)
147 1vcv_A Probable deoxyribose-ph 31.6 1.3E+02 0.0045 25.5 7.1 46 36-89 171-220 (226)
148 3erw_A Sporulation thiol-disul 31.4 68 0.0023 22.7 4.6 24 6-29 54-77 (145)
149 3r2g_A Inosine 5'-monophosphat 31.1 52 0.0018 30.0 4.7 71 6-87 99-171 (361)
150 2x5n_A SPRPN10, 26S proteasome 30.3 87 0.003 25.3 5.6 32 59-90 110-147 (192)
151 2nli_A Lactate oxidase; flavoe 30.1 1.5E+02 0.0052 26.5 7.7 71 9-92 240-318 (368)
152 1gte_A Dihydropyrimidine dehyd 30.0 75 0.0025 32.3 6.1 35 56-92 786-821 (1025)
153 3ovp_A Ribulose-phosphate 3-ep 29.9 34 0.0012 28.8 3.1 35 57-93 169-203 (228)
154 1i1w_A Endo-1,4-beta-xylanase; 28.6 59 0.002 28.2 4.5 48 39-92 153-212 (303)
155 1thf_D HISF protein; thermophI 28.5 36 0.0012 27.9 3.0 35 57-93 195-230 (253)
156 2yw3_A 4-hydroxy-2-oxoglutarat 27.6 2.4E+02 0.0082 22.9 7.9 68 6-80 25-106 (207)
157 1uta_A FTSN, MSGA, cell divisi 27.6 85 0.0029 21.6 4.4 54 5-65 20-81 (81)
158 3gaa_A Uncharacterized protein 26.9 39 0.0013 28.9 3.0 27 22-48 209-235 (252)
159 3zwt_A Dihydroorotate dehydrog 26.4 2.4E+02 0.0081 25.4 8.2 33 57-91 298-331 (367)
160 1vcf_A Isopentenyl-diphosphate 26.3 1.4E+02 0.0047 26.0 6.5 34 57-92 256-290 (332)
161 1mkz_A Molybdenum cofactor bio 26.2 1.5E+02 0.005 23.6 6.2 51 7-66 29-79 (172)
162 3nl6_A Thiamine biosynthetic b 26.0 49 0.0017 31.7 3.7 39 56-94 172-216 (540)
163 2xij_A Methylmalonyl-COA mutas 26.0 1.5E+02 0.0051 29.8 7.4 69 16-92 652-720 (762)
164 2c6q_A GMP reductase 2; TIM ba 25.9 3.5E+02 0.012 24.0 11.2 39 57-97 223-262 (351)
165 3vk5_A MOEO5; TIM barrel, tran 25.2 1.7E+02 0.0057 26.1 6.8 35 57-93 227-262 (286)
166 1ta3_B Endo-1,4-beta-xylanase; 25.0 71 0.0024 27.9 4.4 49 39-93 152-212 (303)
167 3rot_A ABC sugar transporter, 24.9 1.6E+02 0.0055 23.9 6.4 63 14-85 28-93 (297)
168 1me8_A Inosine-5'-monophosphat 24.8 1.8E+02 0.0062 27.0 7.4 40 56-97 351-391 (503)
169 2jvf_A De novo protein M7; tet 24.8 1.5E+02 0.005 21.7 5.3 41 23-70 21-62 (96)
170 1olt_A Oxygen-independent copr 24.7 1.2E+02 0.0042 27.6 6.1 67 21-87 104-172 (457)
171 3fs2_A 2-dehydro-3-deoxyphosph 24.5 2.3E+02 0.008 25.1 7.7 80 5-94 54-145 (298)
172 8abp_A L-arabinose-binding pro 24.4 1.6E+02 0.0054 23.8 6.2 61 14-85 27-89 (306)
173 2l5o_A Putative thioredoxin; s 24.3 2E+02 0.0068 20.6 6.8 26 6-31 48-73 (153)
174 2fep_A Catabolite control prot 24.2 2.4E+02 0.0083 22.8 7.3 61 14-85 41-102 (289)
175 3nvt_A 3-deoxy-D-arabino-heptu 23.9 1.1E+02 0.0036 28.1 5.5 78 5-94 155-239 (385)
176 3brq_A HTH-type transcriptiona 23.8 2.8E+02 0.0094 22.1 7.7 26 59-84 81-107 (296)
177 1kbi_A Cytochrome B2, L-LCR; f 23.7 1.5E+02 0.0052 27.9 6.6 76 9-92 354-437 (511)
178 1vrd_A Inosine-5'-monophosphat 23.5 2E+02 0.0067 26.4 7.3 70 6-86 236-305 (494)
179 4avf_A Inosine-5'-monophosphat 23.4 2.3E+02 0.008 26.3 7.8 93 6-107 228-326 (490)
180 1req_A Methylmalonyl-COA mutas 23.2 1.6E+02 0.0056 29.4 7.0 69 16-92 644-712 (727)
181 2lrn_A Thiol:disulfide interch 22.9 2.1E+02 0.0073 20.7 6.2 24 6-29 49-72 (152)
182 1w8s_A FBP aldolase, fructose- 22.3 2.1E+02 0.007 24.3 6.7 72 5-95 161-239 (263)
183 1y5e_A Molybdenum cofactor bio 22.0 1.5E+02 0.0051 23.4 5.4 51 7-66 32-82 (169)
184 4fn4_A Short chain dehydrogena 21.9 2.4E+02 0.0081 23.8 7.0 17 198-214 225-241 (254)
185 1mjn_A Integrin alpha-L; rossm 21.7 43 0.0015 26.0 2.1 37 53-89 101-137 (179)
186 3g1w_A Sugar ABC transporter; 21.5 3.1E+02 0.011 22.1 7.5 63 14-85 29-93 (305)
187 1xm3_A Thiazole biosynthesis p 21.4 1E+02 0.0035 26.2 4.6 37 56-94 177-214 (264)
188 1vhn_A Putative flavin oxidore 21.3 80 0.0027 27.4 4.0 35 57-93 183-219 (318)
189 1hg3_A Triosephosphate isomera 21.1 1.3E+02 0.0045 25.4 5.1 37 56-94 175-212 (225)
190 3hcw_A Maltose operon transcri 21.0 2.4E+02 0.0081 22.9 6.7 63 13-85 36-98 (295)
191 2f9s_A Thiol-disulfide oxidore 20.9 2.4E+02 0.0081 20.2 7.7 66 6-76 46-134 (151)
192 2odp_A Complement C2; C3/C5 co 20.7 97 0.0033 28.0 4.5 35 55-89 124-173 (509)
193 4g81_D Putative hexonate dehyd 20.6 1.9E+02 0.0064 24.5 6.1 18 197-214 224-241 (255)
194 3dpi_A NAD+ synthetase; ssgcid 20.5 1E+02 0.0034 27.1 4.4 37 31-74 25-65 (285)
195 3cui_A EXO-beta-1,4-glucanase; 20.3 91 0.0031 27.0 4.1 48 39-92 150-208 (315)
196 1nq6_A XYS1; glycoside hydrola 20.3 91 0.0031 26.8 4.1 48 39-92 151-209 (302)
197 1w0m_A TIM, triosephosphate is 20.2 1.6E+02 0.0054 25.0 5.5 37 56-94 172-209 (226)
198 3idv_A Protein disulfide-isome 20.1 3.1E+02 0.01 21.3 7.0 61 6-77 167-234 (241)
No 1
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=5.5e-51 Score=390.92 Aligned_cols=220 Identities=33% Similarity=0.457 Sum_probs=207.0
Q ss_pred CcCchHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCc
Q 026886 1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE 80 (231)
Q Consensus 1 l~SGvpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~ 80 (231)
++|||++|++++++|.+. ..+.|||+|||||.++++++|++||++ |+++++|++|||||+++|.+|.++|++
T Consensus 238 l~~gv~~al~~~~~l~~~-~~~~gIRlDSgd~~~l~~~~r~~ld~~-------G~~~~kI~aSggld~~~i~~l~~~G~~ 309 (494)
T 2f7f_A 238 LKAGVPSAIRVAREMGDK-INFLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSK 309 (494)
T ss_dssp TTTHHHHHHHHHHHHGGG-SEEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTCEEEECSSCCHHHHHHHHHTTCC
T ss_pred hhhhHHHHHHHHHHhhhh-cCCeEEEcCCCCHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHcCCC
Confidence 358999999999998654 568999999999999999999999998 888999999999999999999999999
Q ss_pred eeEEeecCcccccCCCCcceeEEEEeEE---CCc--ceeeccCCCCcCCCCCcceeeeecC-CCCCceeeEEecCCCCCC
Q 026886 81 VDAFGIGTYLVTCYAQAALGCVFKLVEI---NKQ--PRIKLSEDVSKVSIPCKKRSYRLYG-KEGYPLVDIMTGENEPPP 154 (231)
Q Consensus 81 id~fGVGT~Lvt~~~~p~l~~VyKLve~---~g~--P~~KlS~~~~K~t~PG~K~v~R~~~-~~g~~~~D~i~l~~e~~~ 154 (231)
+++|||||+|+++.++|++|+||||+++ ||+ |++|+|++++|.|+||.|+|||+|+ .+|++.+|+|++.+|++
T Consensus 310 ~~sfGvGT~Lt~~~~~~~ld~v~Klv~~~~~~G~~~pv~K~s~~~~K~s~pG~k~v~R~~~~~~g~~~~d~i~~~~e~~- 388 (494)
T 2f7f_A 310 IDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDP- 388 (494)
T ss_dssp CCEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCCG-
T ss_pred EEEEecCcccccCCCCCcccEEEEEEEEEcCCCcCccccccCCCCCCcCCCCceEEEEEeecCCCeEEEEEEEecCCCC-
Confidence 9999999999999999999999999999 999 9999999999999999999999998 67999999999999863
Q ss_pred CCCcceeecCCCCCCceeeecCccceecccccccCCcc-cCCCChhhHHHHHhhhcCCcce-eeeccCCCCCccccc
Q 026886 155 KVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSG-GDYPMVFGDVQFLSTLNGPFIS-SLFLVRPMSKPVSVP 229 (231)
Q Consensus 155 ~~~~~l~~~~p~~~~~~~~~~~~~~~~Ll~~~~~~g~~-~~~P~~~s~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 229 (231)
..+++++|+||..++++++++++.+++||+++|++|++ ++.|++.++|+++...+..+|. .+||.|||.|+|++.
T Consensus 389 ~~~~~~~~~~p~~~~~~~~~~~~~~~~ll~~v~~~G~~~~~~~~l~eir~~~~~~l~~l~~~~~r~~~p~~y~v~~s 465 (494)
T 2f7f_A 389 RQEEEIYMFHPVHTFINKYVRDFEARPVLQDIFVEGKRVYELPTLDEIKQYAKENLDSLHEEYKRDLNPQKYPVDLS 465 (494)
T ss_dssp GGCSEEEEECSSSTTSEEEEESEEEEECCEEEEETTEECCCCCCHHHHHHHHHHHHHHSCHHHHCSSSCCCCCEEEC
T ss_pred ccccceeeeCcchhhhhccccCccchhhhhhhhcCCEEcCCCCCHHHHHHHHHHHHHhCCHHHhcccCCcCCccccC
Confidence 34678999999999999999999999999999999998 4899999999999999999999 999999999999874
No 2
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=100.00 E-value=2.1e-35 Score=282.61 Aligned_cols=156 Identities=18% Similarity=0.169 Sum_probs=136.5
Q ss_pred cEEEeCCCChHHHHHHHHHHHHHHHHhhCC----CCC---C-CeEEEEeCCCCHHH----HHHHHhcCCceeE--EeecC
Q 026886 23 VGIRLDSGDLAYLSCEARKFFRTIEKEFGV----PDF---E-KMSITASNDLNEET----LDALNKQGHEVDA--FGIGT 88 (231)
Q Consensus 23 ~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i----~g~---~-~v~Iv~S~~Lde~~----I~~L~~~ga~id~--fGVGT 88 (231)
.|||+|||||.++++++|++||+. ||+ .|+ + +++|++||||||++ |+.|.++|+++|. |||||
T Consensus 308 lgVR~DSGD~~~~~~~vr~~Ld~~---fG~~~n~~G~kvl~~~~~Ii~Sd~Lde~~~~~ii~~l~~~G~~~d~v~fGvGT 384 (484)
T 3dhf_A 308 LIIRPDSGNPLDTVLKVLEILGKK---FPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENIAFGSGG 384 (484)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHHH---SCCEECTTSCEECCTTEEEEECSSCSHHHHHHHHHHHHHTTBCGGGEEEEESH
T ss_pred EEEECCCCChHHHHHHHHHHHHHH---hCCcccccccccCCCCEEEEEcCCCCHHHHHHHHHHHHhCCCCcccceEcccC
Confidence 499999999999999999999985 666 488 7 89999999999999 8889999999988 99999
Q ss_pred cccccCCCCcceeEEE--EeEECC--cceeeccC-CCCcCCCCCcceeeeecCCCCCceeeEEecCCCCCCCCCcceeec
Q 026886 89 YLVTCYAQAALGCVFK--LVEINK--QPRIKLSE-DVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCR 163 (231)
Q Consensus 89 ~Lvt~~~~p~l~~VyK--Lve~~g--~P~~KlS~-~~~K~t~PG~K~v~R~~~~~g~~~~D~i~l~~e~~~~~~~~l~~~ 163 (231)
+|+|+.++|++|+||| ++++|| +|++|+|. |++|.|.||+|+|||.. +| |++++.+|..+
T Consensus 385 ~L~~~~~~~~l~~v~K~~~v~~~G~~~pv~K~s~td~~K~S~pG~k~v~r~~--~g----~~~~~~~~~~~--------- 449 (484)
T 3dhf_A 385 GLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKRSKKGRLSLHRTP--AG----NFVTLEEGKGD--------- 449 (484)
T ss_dssp HHHTSCCTTTTTEEEEEEEEEETTEEEECCCCCTTCGGGCCCCSSCEEEECT--TS----CEEEECTTGGG---------
T ss_pred ccccCCCCCCCCEEEEEEEEEECCccceeeecCCCCCCccCCCcceEEEEeC--CC----cEEEecCCCCC---------
Confidence 9999999999999999 889999 79999994 68999999999999962 34 78888776311
Q ss_pred CCCCCCceeeecCccceecccccccCCcccCCCChhhHHHHHhh
Q 026886 164 HPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLST 207 (231)
Q Consensus 164 ~p~~~~~~~~~~~~~~~~Ll~~~~~~g~~~~~P~~~s~r~~~~~ 207 (231)
| ....++||+++|++|+++..|++.++|++++.
T Consensus 450 -~----------~~~~~~lL~~v~~~G~~~~~~~l~eiR~~~~~ 482 (484)
T 3dhf_A 450 -L----------EEYGQDLLHTVFKNGKVTKSYSFDEIRKNAQL 482 (484)
T ss_dssp -G----------CSSCCCSCEEEEETTEECCCCCHHHHHHHTCC
T ss_pred -c----------cccccccchhheECCEEcCCCCHHHHHHHHhh
Confidence 1 01156899999999999888999999998864
No 3
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=100.00 E-value=2.8e-34 Score=268.93 Aligned_cols=168 Identities=22% Similarity=0.240 Sum_probs=148.9
Q ss_pred CchHHHHHHHHHHHhcCCCccEEEeCC-----CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhc
Q 026886 3 SGVPNFCAVALALNDLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (231)
Q Consensus 3 SGvpnai~Va~~L~~~g~~~~GVRlDS-----GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ 77 (231)
.++++|+++|++| ..+.|||+|| ||+.++++++|++||++ |+++++|++|||||+++|.+|.++
T Consensus 222 ~~~~~al~~a~~l----~~~d~IrlDs~~~~~gd~~~~v~~v~~~ld~~-------G~~~~~I~aSggl~~~~i~~l~~~ 290 (398)
T 2i1o_A 222 DEKFAAIKIAEMF----DKVDYIRLDTPSSRRGNFEALIREVRWELALR-------GRSDIKIMVSGGLDENTVKKLREA 290 (398)
T ss_dssp CHHHHHHHHHTTC----SCCCEEEECCCGGGCSCHHHHHHHHHHHHHHT-------TCTTSEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh----cCCcEEEeCCCCCCcccHHHHHHHHHHHHHhC-------CCCceEEEEeCCCCHHHHHHHHHc
Confidence 4699999999877 3689999999 99999999999999998 888899999999999999999999
Q ss_pred CCceeEEeecCcccccCCCCcceeEEEEeEECCcceeeccCCCCcCCCCCcceeeeecCCCCCceeeE-EecCCCCCCCC
Q 026886 78 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDI-MTGENEPPPKV 156 (231)
Q Consensus 78 ga~id~fGVGT~Lvt~~~~p~l~~VyKLve~~g~P~~KlS~~~~K~t~PG~K~v~R~~~~~g~~~~D~-i~l~~e~~~~~ 156 (231)
|+ |+|||||++.+ +|++++||||+++||+|++|+| +.||+|++||+|+ | .|+ +++.+|+++.
T Consensus 291 Gv--D~~gvGt~l~~---~~~ld~~~Klv~~~g~p~~K~s------~~pG~k~~~r~~~--~---~d~~~~~~~~~~~~- 353 (398)
T 2i1o_A 291 GA--EAFGVGTSISS---AKPFDFAMDIVEVNGKPETKRG------KMSGRKNVLRCTS--C---HRIEVVPANVQEKT- 353 (398)
T ss_dssp TC--CEEEECHHHHT---CCCCCEEEEEEEETTEECCCTT------SCCSCEEEEEETT--T---CCEEEEETTCCEEC-
T ss_pred CC--CEEEeCcccCC---CCCccEEEEEEEeCCcceEeec------CCCCceEEEEEcC--C---CeEEEEecCCCCcc-
Confidence 95 99999999975 7999999999999999999998 5899999999997 4 499 9999885221
Q ss_pred CcceeecCCCCCCceeeecCccceecccccccCCccc-CCCChhhHHHHHhhhcCCcce
Q 026886 157 GERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGG-DYPMVFGDVQFLSTLNGPFIS 214 (231)
Q Consensus 157 ~~~l~~~~p~~~~~~~~~~~~~~~~Ll~~~~~~g~~~-~~P~~~s~r~~~~~~~~~~~~ 214 (231)
+ ..+..+++||+++|++|+++ ++|++.++|+++...+..+|+
T Consensus 354 --------~--------~~~~~~~~ll~~~~~~G~~~~~~~~l~~~r~~~~~~l~~l~~ 396 (398)
T 2i1o_A 354 --------C--------ICGGSMQNLLVKYLSHGKRTSEYPRPKEIRSRSMKELEYFKD 396 (398)
T ss_dssp --------C--------SSSSCEEECCEEEEETTEESSCCCCHHHHHHHHHHHGGGGC-
T ss_pred --------c--------ccCccccchhhhheeCCEEcCCCCCHHHHHHHHHHHHHhCcC
Confidence 0 11346789999999999985 899999999999999999987
No 4
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=2.5e-34 Score=268.84 Aligned_cols=169 Identities=24% Similarity=0.326 Sum_probs=149.0
Q ss_pred CchHHHHHHHHHHHhcCCCccEEEeCC-----CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhc
Q 026886 3 SGVPNFCAVALALNDLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (231)
Q Consensus 3 SGvpnai~Va~~L~~~g~~~~GVRlDS-----GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ 77 (231)
.++++|++++++| |..+.|||+|| ||+.++++++|++||++ |+++++|++|||||+++|.+|.++
T Consensus 219 ~~~~~al~~~~~~---~~~~d~IrlDs~~~~~gd~~~~v~~~r~~ld~~-------G~~~~~I~aSggl~~~~i~~l~~~ 288 (395)
T 2i14_A 219 DEKVEAVMAAEAL---GKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVR-------GYDWVKIFVSGGLDEEKIKEIVDV 288 (395)
T ss_dssp CHHHHHHHHHTTT---GGGCCEEEECCCTTTCSCHHHHHHHHHHHHHHT-------TCCSCEEEEESSCCHHHHHTTGGG
T ss_pred HHHHHHHHHHHHh---ccCCcEEEeCCCCCCcccHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHh
Confidence 4689999999766 56789999999 99999999999999998 888999999999999999999998
Q ss_pred CCceeEEeecCcccccCCCCcceeEEEEeEECCcceeeccCCCCcCCCCCcceeeeecCCCCCceeeEEecCCCCCCCCC
Q 026886 78 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVG 157 (231)
Q Consensus 78 ga~id~fGVGT~Lvt~~~~p~l~~VyKLve~~g~P~~KlS~~~~K~t~PG~K~v~R~~~~~g~~~~D~i~l~~e~~~~~~ 157 (231)
+|+|||||++.+ +|++++||||+++||+|++|+| +.||+|++||+|+ | .|+|++.+|+++.
T Consensus 289 ---vD~~gvGt~l~~---~~~ld~~~klv~~~g~p~~K~s------~~pG~k~~~R~~~--~---~d~~~~~~e~~~~-- 349 (395)
T 2i14_A 289 ---VDAFGVGGAIAS---AKPVDFALDIVEVEGKPIAKRG------KLSGRKQVYRCEN--G---HYHVVPANKKLER-- 349 (395)
T ss_dssp ---CSEEEECHHHHT---CCCCCCEEEEEEETTEECCCTT------SCCSCEEEEEETT--S---CEEEEETTSCCCB--
T ss_pred ---CCEEEeCcccCC---CCCccEEEEEEEeCCcceeeec------CCCCceEEEEEcC--C---ceEEEeCCCCCcc--
Confidence 899999999974 7999999999999999999998 5899999999997 4 5999999986331
Q ss_pred cceeecCCCCCCceeeecCccceecccccccCCccc-CCCChhhHHHHHhhhcCCcce
Q 026886 158 ERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGG-DYPMVFGDVQFLSTLNGPFIS 214 (231)
Q Consensus 158 ~~l~~~~p~~~~~~~~~~~~~~~~Ll~~~~~~g~~~-~~P~~~s~r~~~~~~~~~~~~ 214 (231)
. | ..+..+++||+++|++|+++ ++|++.++|+++...+..+|.
T Consensus 350 ~------~--------~~~~~~~~ll~~~~~~G~~~~~~~~l~~~r~~~~~~l~~l~~ 393 (395)
T 2i14_A 350 C------P--------VCNAKVEPLLKPIIENGEIVVEFPKAREIREYVLEQAKKFNL 393 (395)
T ss_dssp C------S--------SSCCBEEECCEEEEBTTBCCCCCCCHHHHHHHHHHHHHHTTC
T ss_pred c------c--------cccccccchhhhhhcCCEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 0 1 11346789999999999985 889999999999888877775
No 5
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=99.98 E-value=9.7e-34 Score=265.03 Aligned_cols=123 Identities=21% Similarity=0.197 Sum_probs=110.6
Q ss_pred chHHHHHHH-HHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCC-eE-EEEeCCCCHHHHHHHHh--cC
Q 026886 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-MS-ITASNDLNEETLDALNK--QG 78 (231)
Q Consensus 4 Gvpnai~Va-~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~-v~-Iv~S~~Lde~~I~~L~~--~g 78 (231)
+..+|++.+ +++ +.++.|||+|||||+++++++|++||++ |+++ +| ||+||||||++|.+|.+ +|
T Consensus 253 d~~~fl~~~~~~~---~~~~~gVR~DSGD~~~~~~~~r~~ld~~-------G~~~~~k~Ii~SdgLd~~~i~~l~~~~~g 322 (394)
T 2im5_A 253 TTDVFMRNFSKKH---AMLFTSLRHDSGDPEIFIEKAVRRYEEL-------RVDPKIKYIIFSDSLTPQRAIEIQKLCAG 322 (394)
T ss_dssp CHHHHHHHCCHHH---HHHCCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGCEEEECSSCCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHh---hhcceEEEcCCCCHHHHHHHHHHHHHHc-------CcCcCccEEEEcCCCCHHHHHHHHHHhcC
Confidence 456667643 334 3568999999999999999999999996 6665 78 99999999999999999 89
Q ss_pred CceeEEeecCcccccCC--CCcceeEEEEeEEC------CcceeeccCCCCcCCCCCcceeeeecCC
Q 026886 79 HEVDAFGIGTYLVTCYA--QAALGCVFKLVEIN------KQPRIKLSEDVSKVSIPCKKRSYRLYGK 137 (231)
Q Consensus 79 a~id~fGVGT~Lvt~~~--~p~l~~VyKLve~~------g~P~~KlS~~~~K~t~PG~K~v~R~~~~ 137 (231)
+++|+|||||+|+|+.+ +|++|+|||||++| |+|++|+|++++|.|+| .|+|||+...
T Consensus 323 ~~~d~FGvGT~L~~~~~~~~~~l~~V~Klv~~~~~~~~~g~p~~KlS~~~~K~t~p-~k~v~r~~~~ 388 (394)
T 2im5_A 323 RIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTGE-PEEILLAMNT 388 (394)
T ss_dssp TSEEEEEECHHHHSCCSTTCCCCCEEEEEEEEESSTTSCCEECCBCCSSTTCCBSC-HHHHHHHHHH
T ss_pred CCceEEEeCcccccCCCCCCCccceEeeeeeecccccCCCCceEEecCCCCCccCC-HHHHHHHHHh
Confidence 99999999999999988 89999999999998 99999999999999999 9999998753
No 6
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=99.98 E-value=3.5e-33 Score=262.26 Aligned_cols=122 Identities=20% Similarity=0.239 Sum_probs=104.3
Q ss_pred chHHHHH-HHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCC-e-EEEEeCCCCHHHHHHHHh--cC
Q 026886 4 GVPNFCA-VALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-M-SITASNDLNEETLDALNK--QG 78 (231)
Q Consensus 4 Gvpnai~-Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~-v-~Iv~S~~Lde~~I~~L~~--~g 78 (231)
+..+|++ +.+++ +.++.|||+|||||.+|++++|++||++ |+++ + +||+||||||++|.+|.+ +|
T Consensus 267 d~~~fl~~~~~~~---~~~~~GVR~DSGD~~~~~~~~r~~ld~~-------G~~~~~K~Iv~SdgLde~~i~~l~~~~~~ 336 (408)
T 1yir_A 267 TTDAFLRDFDLYF---AKLFDGLRHDSGDPLLWAEKTIAHYLKL-------GIDPLTKTLVFSDGLDLPRALKIYRALQG 336 (408)
T ss_dssp CHHHHHHHCCHHH---HHHCCEEEECSSCHHHHHHHHHHHHHHH-------TCCGGGSEEEECSSCCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHh---hhcceEEEeCCCCHHHHHHHHHHHHHHc-------CCCCCceEEEECCCCCHHHHHHHHHHhcC
Confidence 3455665 22344 3568999999999999999999999987 6655 6 799999999999999999 89
Q ss_pred CceeEEeecCcccccC-CCCcceeEEEEeEECCcceeeccCCCCcCC--CCCcceeeeec
Q 026886 79 HEVDAFGIGTYLVTCY-AQAALGCVFKLVEINKQPRIKLSEDVSKVS--IPCKKRSYRLY 135 (231)
Q Consensus 79 a~id~fGVGT~Lvt~~-~~p~l~~VyKLve~~g~P~~KlS~~~~K~t--~PG~K~v~R~~ 135 (231)
+++|+|||||+|+|+. ++|++|+|||||++||+|++|+|++++|.| .||.|++||.+
T Consensus 337 ~~~d~FGVGT~L~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t~~~pg~~~~~r~~ 396 (408)
T 1yir_A 337 RINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKHV 396 (408)
T ss_dssp TSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSCC-------CHHHHHHHHH
T ss_pred CCceEEEeChhhccCCCCCCccceEEEEEEECCeeeEecCCCCCCcCCCCccceeeEeee
Confidence 9999999999999998 899999999999999999999999999999 99999999975
No 7
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=99.98 E-value=7.3e-33 Score=260.28 Aligned_cols=120 Identities=26% Similarity=0.249 Sum_probs=106.3
Q ss_pred chHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCC--CeEEEEeCCCCHHHHHHHHh--cCC
Q 026886 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QGH 79 (231)
Q Consensus 4 Gvpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~--~v~Iv~S~~Lde~~I~~L~~--~ga 79 (231)
|++||++++.+ ++|.++.|||+|||||.+|++++|++||++ |++ +++||+||||||++|.+|.+ +|+
T Consensus 262 ~~~~~l~~~~~--~~~~~~~GVR~DSGD~~~~~~k~r~~ld~~-------G~~p~~~~Ii~SdgLde~~i~~l~~~~~~~ 332 (407)
T 3os4_A 262 TMDAFLRDFDL--AFANRYQGLRHDSGDPIEWGEKAIAHYEKL-------GIDPMKKVLVFSDNLDLEKALFLYRHFYQR 332 (407)
T ss_dssp CHHHHHHHCCH--HHHHHSCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECSSCCHHHHHHHHHHHTTT
T ss_pred ChHHHHHHHHH--HhcccCeEEEcCCCChHHHHHHHHHHHHHC-------CcCcCceEEEECCCCCHHHHHHHHHHhcCC
Confidence 68999999832 235578999999999999999999999997 665 67999999999999999987 899
Q ss_pred ceeEEeecCcccccCC-CCcceeEEEEeEECCcceeeccCCCCcCCCCCcceeee
Q 026886 80 EVDAFGIGTYLVTCYA-QAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYR 133 (231)
Q Consensus 80 ~id~fGVGT~Lvt~~~-~p~l~~VyKLve~~g~P~~KlS~~~~K~t~PG~K~v~R 133 (231)
++|+|||||+|+|+.+ +|+||+|||||++||+|++|+|++++|+|+ |.+...|
T Consensus 333 ~~d~fGVGT~L~~~~~~~~~l~~V~Klv~~~G~P~~KlSd~~~K~~~-~~~~~~~ 386 (407)
T 3os4_A 333 IKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTIC-QDPAFVD 386 (407)
T ss_dssp SEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSSTTCCCC-CCHHHHH
T ss_pred CCcEEeechheeeCCCCCCCcceEEEEEEECCcceeEecCCCccccC-CCHHHHH
Confidence 9999999999999998 999999999999999999999999999985 3344333
No 8
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=99.97 E-value=4.5e-33 Score=264.23 Aligned_cols=121 Identities=22% Similarity=0.219 Sum_probs=106.7
Q ss_pred chHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCC-Ce-EEEEeCCCCHHHHHHHHh--cCC
Q 026886 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE-KM-SITASNDLNEETLDALNK--QGH 79 (231)
Q Consensus 4 Gvpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~-~v-~Iv~S~~Lde~~I~~L~~--~ga 79 (231)
|++||++++.+ ++|.++.|||+|||||.+|++++|++||++ |++ ++ +||+||||||++|.+|.+ +|+
T Consensus 272 ~~~~fl~~~~~--~~~~~~~GVR~DSGDp~~~~~k~r~~ld~~-------G~~~~~K~Iv~SdgLde~~i~~L~~~~~~~ 342 (446)
T 4hl7_A 272 TIDAFLNDFNR--HLANAYDGVRHDSGCPFRWGDKMIAHYQQL-------GIDPTTKLFIFSDGLDFDQALELCEYFAGR 342 (446)
T ss_dssp CHHHHHHHCCH--HHHHHSCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECSSCCHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHH--HhcccccEEecCCCChHHHHHHHHHHHHHc-------CCCCCCcEEEEcCCCCHHHHHHHHHHhcCC
Confidence 68999998632 336678999999999999999999999997 664 67 499999999999999976 889
Q ss_pred ceeEEeecCcccccCC---------CCcceeEEEEeEECCcceeeccCCCCcCCCCCcceeeee
Q 026886 80 EVDAFGIGTYLVTCYA---------QAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRL 134 (231)
Q Consensus 80 ~id~fGVGT~Lvt~~~---------~p~l~~VyKLve~~g~P~~KlS~~~~K~t~PG~K~v~R~ 134 (231)
++|+|||||+|+|+.+ +|+||+|||||++||+|++|+|++++|+|+ |.+...|+
T Consensus 343 ~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~VyKLve~~G~P~~KlSd~~gK~t~-~d~~~~~~ 405 (446)
T 4hl7_A 343 VKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKISDQPEKAMC-EDPIFLAN 405 (446)
T ss_dssp SEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEEEEEEETTEECCBCCSSGGGCBC-SCHHHHHH
T ss_pred CCcEEEeccceeccCcccccccccCCCCceeEEEEEEECCcceeEecCCcccccC-CCHHHHHH
Confidence 9999999999999987 899999999999999999999999999996 45555443
No 9
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=6.5e-33 Score=263.27 Aligned_cols=111 Identities=21% Similarity=0.243 Sum_probs=103.0
Q ss_pred CccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCC--CeEEEEeCCCCHHHHHHHHh--cCCceeEEeecCccccc---
Q 026886 21 KAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTC--- 93 (231)
Q Consensus 21 ~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~--~v~Iv~S~~Lde~~I~~L~~--~ga~id~fGVGT~Lvt~--- 93 (231)
++.|||+|||||.++++++|++||++ |++ +++||+||||||++|.+|.+ +|+++|+|||||+|+|+
T Consensus 307 ~~~GVR~DSGDp~~~~~~~r~~ld~~-------G~~p~~~~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGVGT~L~~d~~~ 379 (449)
T 1ybe_A 307 DWTGFRPDSAPPIEGGEKIIEWWRKM-------GRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAG 379 (449)
T ss_dssp GSSEECCCSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHCCCTT
T ss_pred ccceEecCCCCHHHHHHHHHHHHHHc-------CCCcCceEEEEeCCCCHHHHHHHHHHhcCCCceEEEeChhhccCccc
Confidence 48999999999999999999999997 776 88999999999999999999 99999999999999994
Q ss_pred ------CCCCcceeEEEEeEECCcceeeccCCCCcCCCCCcceeeeecCCCC
Q 026886 94 ------YAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEG 139 (231)
Q Consensus 94 ------~~~p~l~~VyKLve~~g~P~~KlS~~~~K~t~PG~K~v~R~~~~~g 139 (231)
.++|++|+|||||++||+|++|+|++++|.| ||.|+|||++...|
T Consensus 380 ~~~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t-~g~k~v~r~~~~~g 430 (449)
T 1ybe_A 380 CAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKAT-GDPAEVERYLKFFG 430 (449)
T ss_dssp CCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCB-SCHHHHHHHHHHHC
T ss_pred ccccccCCCCccceEEEEeeecCcceeecCCCCCCCC-CCHHHHHHHHhhcC
Confidence 3689999999999999999999999999999 99999999986434
No 10
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=5.2e-32 Score=256.59 Aligned_cols=121 Identities=26% Similarity=0.355 Sum_probs=105.3
Q ss_pred chHHHHHHH-HHHHhcCCCccEEEeCCCChHHHHHHHHHHH-HHHHHhhCCCCCCC-eE-EEEeCCCCHHHHHHHH---h
Q 026886 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFF-RTIEKEFGVPDFEK-MS-ITASNDLNEETLDALN---K 76 (231)
Q Consensus 4 Gvpnai~Va-~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~l-d~~~~~l~i~g~~~-v~-Iv~S~~Lde~~I~~L~---~ 76 (231)
|..+|++.+ ++| +.++.|||+|||||+++++++|++| |++ |+++ +| ||+||||||++|.+|. +
T Consensus 286 d~~~fL~~~~~~l---~~~~~GVR~DSGDp~~~~~~~r~~l~d~~-------G~~~~~k~Ii~SdgLd~~~i~~l~~~~~ 355 (441)
T 1vlp_A 286 GTDDFLKSFRPPY---SDAYVGVRQDSGDPVEYTKKISHHYHDVL-------KLPKFSKIICYSDSLNVEKAITYSHAAK 355 (441)
T ss_dssp CHHHHHTTCCTTH---HHHSCEEEECSSCHHHHHHHHHHHHHTTS-------CCCTTSSEEEECSSCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHh---hhcceEEEcCCCCHHHHHHHHHHHHHHHc-------CCCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 456667655 334 4668999999999999999999999 875 5555 67 9999999999999999 6
Q ss_pred cCCceeEEeecCcccccC--------CCCcceeEEEEeEECCcceeeccCCCCcCCCCCcceeeeec
Q 026886 77 QGHEVDAFGIGTYLVTCY--------AQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLY 135 (231)
Q Consensus 77 ~ga~id~fGVGT~Lvt~~--------~~p~l~~VyKLve~~g~P~~KlS~~~~K~t~PG~K~v~R~~ 135 (231)
+|+++|+|||||+|+||. ++|++|+|||||++||+|++|+|++++|+|+| .+.|.|+-
T Consensus 356 ~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~l~~V~Klv~~nG~p~~KlS~~~~K~t~~-~~~~~~~~ 421 (441)
T 1vlp_A 356 ENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNMGD-PATVKRVK 421 (441)
T ss_dssp HTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEEEEEEETTEECCBCCSSTTCCBSC-HHHHHHHH
T ss_pred cCCceEEEEeCchheecccccccccCCCCCcceEEEEEEECCeeeEEecCCCCCccCC-HHHHHHHH
Confidence 899999999999999965 58999999999999999999999999999999 66666653
No 11
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=99.18 E-value=2.7e-11 Score=109.38 Aligned_cols=81 Identities=21% Similarity=0.263 Sum_probs=64.0
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.++|++|++++.++.+ ++++++. ++++++|.+|||+|++.|.++.+.| +|.+|||+.+ + ++|++++
T Consensus 218 aD~I~ld~~~~~~l~~-~v~~l~~--------~~~~~~I~ASGGIt~~ni~~~~~aG--aD~i~vGs~i-~--~a~~~D~ 283 (299)
T 2jbm_A 218 ADLVLLDNFKPEELHP-TATVLKA--------QFPSVAVEASGGITLDNLPQFCGPH--IDVISMGMLT-Q--AAPALDF 283 (299)
T ss_dssp CSEEEEESCCHHHHHH-HHHHHHH--------HCTTSEEEEESSCCTTTHHHHCCTT--CCEEECTHHH-H--SCCCCCE
T ss_pred CCEEEECCCCHHHHHH-HHHHhhc--------cCCCeeEEEECCCCHHHHHHHHHCC--CCEEEEChhh-c--CCCCcce
Confidence 7899999999988764 4456765 5788999999999999999999999 5999999944 3 3699999
Q ss_pred EEEEeEECCcceeec
Q 026886 102 VFKLVEINKQPRIKL 116 (231)
Q Consensus 102 VyKLve~~g~P~~Kl 116 (231)
+||+++++|+|++|+
T Consensus 284 s~~i~~~~g~p~~K~ 298 (299)
T 2jbm_A 284 SLKLFAKEVAPVPKI 298 (299)
T ss_dssp EEEEEEEC-------
T ss_pred EEEEEEeCCcccccc
Confidence 999999999999997
No 12
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.72 E-value=8.1e-09 Score=93.01 Aligned_cols=75 Identities=16% Similarity=0.129 Sum_probs=43.4
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.++||+|++++.++. +++++++..+ +|+++++|++|||+|++.|.++.+.| +|.||||+.+ .++|++++
T Consensus 220 aD~I~ld~~~~~~l~-~~v~~l~~~~-----~g~~~v~I~ASGGIt~~ni~~~~~~G--vD~i~vGs~i---~~a~~~D~ 288 (294)
T 3c2e_A 220 ADVIMLDNFKGDGLK-MCAQSLKNKW-----NGKKHFLLECSGGLNLDNLEEYLCDD--IDIYSTSSIH---QGTPVIDF 288 (294)
T ss_dssp CSEEECCC---------------------------CCEEEEECCCCC------CCCS--CSEEECGGGT---SSCCCCCE
T ss_pred CCEEEECCCCHHHHH-HHHHHhcccc-----cCCCCeEEEEECCCCHHHHHHHHHcC--CCEEEEechh---cCCCCCce
Confidence 789999999988774 4455665420 15788999999999999999999999 5999999985 33789999
Q ss_pred EEEEeE
Q 026886 102 VFKLVE 107 (231)
Q Consensus 102 VyKLve 107 (231)
+||++|
T Consensus 289 s~~i~~ 294 (294)
T 3c2e_A 289 SLKLAH 294 (294)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999985
No 13
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.55 E-value=1.4e-07 Score=85.60 Aligned_cols=69 Identities=26% Similarity=0.332 Sum_probs=58.1
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.++||+|++++..+.+.++.. ..+++|.+|||+|++.|.++.+.| +|.|+||+ ++. +.|++++
T Consensus 230 aD~I~LDn~~~~~l~~av~~i------------~~~v~ieaSGGI~~~~i~~~a~tG--VD~isvG~-lt~--sa~~lD~ 292 (298)
T 3gnn_A 230 ARSVLLDNFTLDMMRDAVRVT------------EGRAVLEVSGGVNFDTVRAIAETG--VDRISIGA-LTK--DVRATDY 292 (298)
T ss_dssp CEEEEEESCCHHHHHHHHHHH------------TTSEEEEEESSCSTTTHHHHHHTT--CSEEECGG-GGT--SCCCCCE
T ss_pred CCEEEECCCCHHHHHHHHHHh------------CCCCeEEEEcCCCHHHHHHHHHcC--CCEEEECC-eec--CCCccce
Confidence 689999999988776655543 157999999999999999999998 69999998 443 4799999
Q ss_pred EEEEeE
Q 026886 102 VFKLVE 107 (231)
Q Consensus 102 VyKLve 107 (231)
.+|++|
T Consensus 293 sl~i~e 298 (298)
T 3gnn_A 293 SMRIVE 298 (298)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 999986
No 14
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.51 E-value=1.9e-07 Score=85.43 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=57.2
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.++||+|++++..+.+.+ +.++ .+++|.+|||+|++.|.++.+.| +|.++||+ |+. +.|++++
T Consensus 252 aD~I~LDn~~~~~l~~av-~~l~-----------~~v~ieaSGGIt~~~I~~~a~tG--VD~isvGa-lt~--sa~~lD~ 314 (320)
T 3paj_A 252 ADIIMLDNFSLEMMREAV-KINA-----------GRAALENSGNITLDNLKECAETG--VDYISVGA-LTK--HLKALDL 314 (320)
T ss_dssp CSEEEEESCCHHHHHHHH-HHHT-----------TSSEEEEESSCCHHHHHHHHTTT--CSEEECTH-HHH--SBCCCCE
T ss_pred CCEEEECCCCHHHHHHHH-HHhC-----------CCCeEEEECCCCHHHHHHHHHcC--CCEEEECc-eec--CCCccee
Confidence 689999999988775443 3332 47899999999999999999998 79999998 443 4799999
Q ss_pred EEEEeE
Q 026886 102 VFKLVE 107 (231)
Q Consensus 102 VyKLve 107 (231)
.+|++|
T Consensus 315 sl~i~~ 320 (320)
T 3paj_A 315 SMRFKS 320 (320)
T ss_dssp EEEECC
T ss_pred EEEeeC
Confidence 999875
No 15
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.40 E-value=3.4e-07 Score=81.42 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=59.9
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.++|++|+.++.++.+. +++++. ++++++|++|||+|++.|.++.+.| +|.+|||+.+. ++|++++
T Consensus 203 aD~I~ld~~~~~~l~~~-v~~l~~--------~~~~~~i~AsGGI~~~ni~~~~~aG--aD~i~vGs~i~---~a~~~D~ 268 (273)
T 2b7n_A 203 ADIVMCDNLSVLETKEI-AAYRDA--------HYPFVLLEASGNISLESINAYAKSG--VDAISVGALIH---QATFIDM 268 (273)
T ss_dssp CSEEEEETCCHHHHHHH-HHHHHH--------HCTTCEEEEESSCCTTTHHHHHTTT--CSEEECTHHHH---TCCCCCE
T ss_pred CCEEEECCCCHHHHHHH-HHHhhc--------cCCCcEEEEECCCCHHHHHHHHHcC--CcEEEEcHHhc---CCCCCce
Confidence 78999999999887644 447765 5788999999999999999999999 59999999864 3789999
Q ss_pred EEEE
Q 026886 102 VFKL 105 (231)
Q Consensus 102 VyKL 105 (231)
.+|+
T Consensus 269 s~~i 272 (273)
T 2b7n_A 269 HMKM 272 (273)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9886
No 16
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.10 E-value=3e-06 Score=76.48 Aligned_cols=67 Identities=22% Similarity=0.291 Sum_probs=55.3
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.++|++|++++.++.+.++ +++ .+++|.+|||+|++.|.++.+.| +|.||||+ +++ ++|++++
T Consensus 229 aD~I~ld~~~~e~l~~~v~-~~~-----------~~~~I~ASGGIt~~~i~~~a~~G--vD~isvGs-li~--~a~~~D~ 291 (296)
T 1qap_A 229 ADIIMLDNFNTDQMREAVK-RVN-----------GQARLEVSGNVTAETLREFAETG--VDFISVGA-LTK--HVRALDL 291 (296)
T ss_dssp CSEEEESSCCHHHHHHHHH-TTC-----------TTCCEEECCCSCHHHHHHHHHTT--CSEEECSH-HHH--EEECCCE
T ss_pred CCEEEECCCCHHHHHHHHH-HhC-----------CCCeEEEECCCCHHHHHHHHHcC--CCEEEEeH-HHc--CCCCCce
Confidence 7899999999988765443 321 36899999999999999999999 59999999 544 3789999
Q ss_pred EEEE
Q 026886 102 VFKL 105 (231)
Q Consensus 102 VyKL 105 (231)
.+|+
T Consensus 292 sl~i 295 (296)
T 1qap_A 292 SMRF 295 (296)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9886
No 17
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.38 E-value=0.00054 Score=61.44 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=55.1
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.+.|++|.-++.. .+++++.++.. +.+++|.+|||++++.|.++.+.| +|.++||. ++++ .|++++
T Consensus 215 aD~I~LDn~~~~~-~~~~v~~l~~~--------~~~v~ieaSGGIt~~~i~~~a~tG--VD~isvG~-l~~~--a~~~D~ 280 (284)
T 1qpo_A 215 PELILLDNFAVWQ-TQTAVQRRDSR--------APTVMLESSGGLSLQTAATYAETG--VDYLAVGA-LTHS--VRVLDI 280 (284)
T ss_dssp CSEEEEETCCHHH-HHHHHHHHHHH--------CTTCEEEEESSCCTTTHHHHHHTT--CSEEECGG-GTSS--BCCCCE
T ss_pred CCEEEECCCCHHH-HHHHHHHhhcc--------CCCeEEEEECCCCHHHHHHHHhcC--CCEEEECH-HHcC--CCCcce
Confidence 5688888877643 45556666653 257899999999999999999999 89999998 4443 688999
Q ss_pred EEEE
Q 026886 102 VFKL 105 (231)
Q Consensus 102 VyKL 105 (231)
.+|+
T Consensus 281 sl~i 284 (284)
T 1qpo_A 281 GLDM 284 (284)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8874
No 18
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.09 E-value=0.001 Score=60.03 Aligned_cols=68 Identities=18% Similarity=0.241 Sum_probs=53.6
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.+.|++|..++..+ |++.... . .+++|.+|||++++.|.++.+.| +|.++||. |+++ .|++++
T Consensus 219 aD~I~LDn~~~~~l----~~av~~~-------~-~~v~ieaSGGIt~~~i~~~a~tG--VD~IsvGa-lt~s--a~~lD~ 281 (287)
T 3tqv_A 219 ADIVMLDNFSGEDI----DIAVSIA-------R-GKVALEVSGNIDRNSIVAIAKTG--VDFISVGA-ITKH--IKAIDL 281 (287)
T ss_dssp CSEEEEESCCHHHH----HHHHHHH-------T-TTCEEEEESSCCTTTHHHHHTTT--CSEEECSH-HHHS--BCCCCE
T ss_pred CCEEEEcCCCHHHH----HHHHHhh-------c-CCceEEEECCCCHHHHHHHHHcC--CCEEEECh-hhcC--Ccccce
Confidence 78999999997554 4444433 1 47899999999999999999999 89999975 4443 689999
Q ss_pred EEEEe
Q 026886 102 VFKLV 106 (231)
Q Consensus 102 VyKLv 106 (231)
.+|+.
T Consensus 282 sl~i~ 286 (287)
T 3tqv_A 282 SLQVQ 286 (287)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 98863
No 19
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.90 E-value=0.0031 Score=57.25 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=53.3
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.+.|++|.-++.. +|++.... . .+++|.+|||++++.|.++.+.| +|.+++| .|+.+ .|++++
T Consensus 228 aDiImLDn~s~~~----l~~av~~~-------~-~~v~leaSGGIt~~~i~~~A~tG--VD~IsvG-alths--a~~lDi 290 (300)
T 3l0g_A 228 VDMILLDNMSISE----IKKAVDIV-------N-GKSVLEVSGCVNIRNVRNIALTG--VDYISIG-CITNS--FQNKDI 290 (300)
T ss_dssp CSEEEEESCCHHH----HHHHHHHH-------T-TSSEEEEESSCCTTTHHHHHTTT--CSEEECG-GGTSS--CCCCCE
T ss_pred CCEEEECCCCHHH----HHHHHHhh-------c-CceEEEEECCCCHHHHHHHHHcC--CCEEEeC-ccccC--CCccee
Confidence 6799999988643 34444443 1 47899999999999999999999 8999999 45443 689999
Q ss_pred EEEE
Q 026886 102 VFKL 105 (231)
Q Consensus 102 VyKL 105 (231)
.+|+
T Consensus 291 sl~i 294 (300)
T 3l0g_A 291 GLDI 294 (300)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 20
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.79 E-value=0.0017 Score=58.29 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=55.7
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCccee
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~ 101 (231)
.+.|.+|.-++..+ +++++.++.. +.+++|.+|||++++.|.++.+.| +|.++||.-. ++ +|++++
T Consensus 214 aD~I~LDn~~~e~l-~~av~~l~~~--------~~~v~ieASGGIt~eni~~~a~tG--VD~IsvGslt-~s--a~~~D~ 279 (285)
T 1o4u_A 214 ADIVMLDNLSPEEV-KDISRRIKDI--------NPNVIVEVSGGITEENVSLYDFET--VDVISSSRLT-LQ--EVFVDL 279 (285)
T ss_dssp CSEEEEESCCHHHH-HHHHHHHHHH--------CTTSEEEEEECCCTTTGGGGCCTT--CCEEEEGGGT-SS--CCCCCE
T ss_pred CCEEEECCCCHHHH-HHHHHHhhcc--------CCCceEEEECCCCHHHHHHHHHcC--CCEEEEeHHH-cC--CCCcce
Confidence 56788888776554 4556666553 256899999999999999999998 8999999844 32 689999
Q ss_pred EEEEe
Q 026886 102 VFKLV 106 (231)
Q Consensus 102 VyKLv 106 (231)
.+|++
T Consensus 280 sl~i~ 284 (285)
T 1o4u_A 280 SLEIQ 284 (285)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99875
No 21
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.77 E-value=0.03 Score=50.11 Aligned_cols=46 Identities=26% Similarity=0.405 Sum_probs=39.8
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccCCCCcceeEEEEeE
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVE 107 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~VyKLve 107 (231)
+++|++|||++++.+.++.+.| +|.++||. ++++ .|++++.+|+++
T Consensus 240 ~ipi~AsGGIt~eni~~~a~tG--vD~IsVgs-~~~~--a~~~D~sl~i~~ 285 (286)
T 1x1o_A 240 RVPLEASGNMTLERAKAAAEAG--VDYVSVGA-LTHS--AKALDLSLLVVR 285 (286)
T ss_dssp SSCEEEESSCCHHHHHHHHHHT--CSEEECTH-HHHS--CCCCCEEEEEEE
T ss_pred CCeEEEEcCCCHHHHHHHHHcC--CCEEEEcH-HHcC--CCceeeEEEEec
Confidence 5799999999999999999999 79999977 4443 689999999864
No 22
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=89.70 E-value=0.47 Score=38.73 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=32.6
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+++.|+++||++.+.+.++.+.| .|.+.||+.++...
T Consensus 158 ~~~~i~~~gGI~~~~~~~~~~~G--ad~vvvGsai~~~~ 194 (211)
T 3f4w_A 158 RKARIAVAGGISSQTVKDYALLG--PDVVIVGSAITHAA 194 (211)
T ss_dssp SSCEEEEESSCCTTTHHHHHTTC--CSEEEECHHHHTCS
T ss_pred CCCcEEEECCCCHHHHHHHHHcC--CCEEEECHHHcCCC
Confidence 36799999999999999999988 68999999998753
No 23
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=87.42 E-value=2.7 Score=33.78 Aligned_cols=67 Identities=16% Similarity=0.232 Sum_probs=50.4
Q ss_pred HHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeE-EeecCcc
Q 026886 15 LNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDA-FGIGTYL 90 (231)
Q Consensus 15 L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~-fGVGT~L 90 (231)
..+.+..+.|+=.-++.-....+++.+.|++. |..+++|++-|.+-.+....+.+.| +|. |+-||++
T Consensus 65 a~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~-------g~~~i~v~vGG~~~~~~~~~l~~~G--~d~v~~~~~~~ 132 (161)
T 2yxb_A 65 AVQEDVDVIGVSILNGAHLHLMKRLMAKLREL-------GADDIPVVLGGTIPIPDLEPLRSLG--IREIFLPGTSL 132 (161)
T ss_dssp HHHTTCSEEEEEESSSCHHHHHHHHHHHHHHT-------TCTTSCEEEEECCCHHHHHHHHHTT--CCEEECTTCCH
T ss_pred HHhcCCCEEEEEeechhhHHHHHHHHHHHHhc-------CCCCCEEEEeCCCchhcHHHHHHCC--CcEEECCCCCH
Confidence 34446667777666666666777777788776 7777899999998888888888888 464 9999875
No 24
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=86.12 E-value=0.72 Score=37.77 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.0
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||++.+.+.++.+.| .+++.|||.|..+
T Consensus 148 ~ipvia~GGI~~~~i~~~~~~G--a~gv~vGsai~~~ 182 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWIDAG--CAGAGLGSDLYRA 182 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHHHT--CSEEEECTTTCCT
T ss_pred CCeEEEeCCCCHHHHHHHHHcC--CCEEEEChHHhCC
Confidence 5899999999999999999988 7899999999764
No 25
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.68 E-value=2.5 Score=37.99 Aligned_cols=76 Identities=20% Similarity=0.158 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---CC--------CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHHHHH
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---DS--------GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLD 72 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---DS--------GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~~I~ 72 (231)
+..++.++++|.+.|..+.-|-. +. |.-..+++++|+.+ ++.|++.|++ +.+.+.
T Consensus 238 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~t~e~a~ 304 (349)
T 3hgj_A 238 LEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-------------GLRTGAVGLITTPEQAE 304 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-------------CceEEEECCCCCHHHHH
Confidence 56789999999998877655531 11 11123344444322 3589999998 799999
Q ss_pred HHHhcCCceeEEeecCcccccC
Q 026886 73 ALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 73 ~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.+.|. .|..++|+.+..+.
T Consensus 305 ~~l~~G~-aD~V~iGR~~lanP 325 (349)
T 3hgj_A 305 TLLQAGS-ADLVLLGRVLLRDP 325 (349)
T ss_dssp HHHHTTS-CSEEEESTHHHHCT
T ss_pred HHHHCCC-ceEEEecHHHHhCc
Confidence 9998874 69999999998753
No 26
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=84.82 E-value=3.8 Score=37.26 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=34.1
Q ss_pred eEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCc
Q 026886 58 MSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 58 v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~ 98 (231)
+.|+++||+ +.+.|.+..+.| .|+.++||.|+.+...|.
T Consensus 208 iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~~~~t~Esp~ 247 (361)
T 3khj_A 208 IPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPG 247 (361)
T ss_dssp CCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTTTBTTSSC
T ss_pred CeEEEECCCCCHHHHHHHHHcC--CCEEEEChhhhcCCcCCc
Confidence 689999999 899999998888 689999999999876663
No 27
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=84.52 E-value=2.2 Score=38.62 Aligned_cols=76 Identities=12% Similarity=0.140 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---C------CC--ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHHHHH
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---D------SG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLD 72 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---D------SG--Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~~I~ 72 (231)
+..++.++++|.+.|..+.-|-. . +| .-..+++++|+.+ ++.|++.|++ +.+.+.
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~GgI~s~e~a~ 311 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-------------KLPVTSAWGFGTPQLAE 311 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------TCCEEECSSTTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-------------CCcEEEeCCCCCHHHHH
Confidence 57889999999999877654422 1 11 1233444444433 2479999999 699999
Q ss_pred HHHhcCCceeEEeecCcccccC
Q 026886 73 ALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 73 ~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.+.|. .|..++|+.+..+.
T Consensus 312 ~~l~~G~-aD~V~iGR~~lanP 332 (363)
T 3l5l_A 312 AALQANQ-LDLVSVGRAHLADP 332 (363)
T ss_dssp HHHHTTS-CSEEECCHHHHHCT
T ss_pred HHHHCCC-ccEEEecHHHHhCc
Confidence 9998874 69999999998753
No 28
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.14 E-value=1.6 Score=37.38 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeec-Cccccc
Q 026886 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIG-TYLVTC 93 (231)
Q Consensus 35 ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVG-T~Lvt~ 93 (231)
-.+++|+++++. |+. +.|.+-||++++.+.++.+.| .|.|-+| +.+..+
T Consensus 153 kI~~lr~~~~~~-------~~~-~~I~VdGGI~~~~~~~~~~aG--Ad~~V~G~saif~~ 202 (231)
T 3ctl_A 153 KLAELKAWRERE-------GLE-YEIEVDGSCNQATYEKLMAAG--ADVFIVGTSGLFNH 202 (231)
T ss_dssp HHHHHHHHHHHH-------TCC-CEEEEESCCSTTTHHHHHHHT--CCEEEECTTTTGGG
T ss_pred HHHHHHHHHhcc-------CCC-ceEEEECCcCHHHHHHHHHcC--CCEEEEccHHHhCC
Confidence 346678888764 543 589999999999999999999 6899999 888764
No 29
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.01 E-value=0.53 Score=38.29 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=32.3
Q ss_pred CCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccc
Q 026886 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 55 ~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++++.|+++||++.+.+.++.+.| .|+++|||.+..
T Consensus 148 ~~~~pvia~GGI~~~~~~~~~~~G--a~~v~vGs~i~~ 183 (205)
T 1wa3_A 148 FPNVKFVPTGGVNLDNVCEWFKAG--VLAVGVGSALVK 183 (205)
T ss_dssp CTTCEEEEBSSCCTTTHHHHHHHT--CSCEEECHHHHC
T ss_pred CCCCcEEEcCCCCHHHHHHHHHCC--CCEEEECccccC
Confidence 447899999999999999999999 689999999875
No 30
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=82.75 E-value=3.1 Score=33.99 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=30.7
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||+ +.+.+.++.+.| .|++.||+.|..
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~G--ad~v~vG~al~~ 209 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDLG--VHCSVVGGAITR 209 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEecCCCCHHHHHHHHHcC--CCEEEEChHHcC
Confidence 4689999999 999999999998 789999998764
No 31
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=82.54 E-value=2.9 Score=37.24 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---C-----CCC--hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---D-----SGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---D-----SGD--l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~~I~~ 73 (231)
...++.+|++|.+.|..+.-|=- + ++. -..+++++|+.+ ++.|++.|++ +.+.+.+
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~s~~~a~~ 294 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-------------DMATGAVGMITDGSMAEE 294 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-------------CCCEEEECCCCCHHHHHH
Confidence 56899999999999876654411 1 121 123344444332 3589999999 8999999
Q ss_pred HHhcCCceeEEeecCcccccC
Q 026886 74 LNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 74 L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.+.|. .|..++|+.+..+.
T Consensus 295 ~l~~G~-aD~V~iGR~~i~nP 314 (338)
T 1z41_A 295 ILQNGR-ADLIFIGRELLRDP 314 (338)
T ss_dssp HHHTTS-CSEEEECHHHHHCT
T ss_pred HHHcCC-ceEEeecHHHHhCc
Confidence 998874 68999999998753
No 32
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=80.76 E-value=2.9 Score=37.58 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHhcCCCccEEE---eC-----CCC--hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 026886 5 VPNFCAVALALNDLGYKAVGIR---LD-----SGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVR---lD-----SGD--l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~~I~~ 73 (231)
+..++.+|++|.+.|..+.-|- .+ ++. -..+++++|+.+ ++.|+++|++ +.+.+.+
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-------------~iPVi~~GgI~s~e~a~~ 294 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-------------DIPTGAVGLITSGWQAEE 294 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-------------TCCEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-------------CCcEEeeCCCCCHHHHHH
Confidence 5788999999999996654442 11 111 123343333322 3579999999 6899999
Q ss_pred HHhcCCceeEEeecCcccccC
Q 026886 74 LNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 74 L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.+.|. .|..++|+.+..+.
T Consensus 295 ~L~~G~-aD~V~iGR~~lanP 314 (340)
T 3gr7_A 295 ILQNGR-ADLVFLGRELLRNP 314 (340)
T ss_dssp HHHTTS-CSEEEECHHHHHCT
T ss_pred HHHCCC-eeEEEecHHHHhCc
Confidence 988874 68999999998753
No 33
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=79.39 E-value=1 Score=37.61 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=32.3
Q ss_pred CCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccc
Q 026886 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 55 ~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++++.++++||++.+.+.++.+.| .++++|||.+..
T Consensus 149 ~~~ipvvaiGGI~~~n~~~~l~aG--a~~vavgSai~~ 184 (207)
T 2yw3_A 149 FPEVRFLPTGGIKEEHLPHYAALP--NLLAVGGSWLLQ 184 (207)
T ss_dssp CTTCEEEEBSSCCGGGHHHHHTCS--SBSCEEESGGGS
T ss_pred CCCCcEEEeCCCCHHHHHHHHhCC--CcEEEEehhhhC
Confidence 457899999999999999999998 578999999875
No 34
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=78.76 E-value=6.7 Score=36.38 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=35.2
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCc
Q 026886 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 56 ~~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~ 98 (231)
.++.|+++||+ +...|....+.| .|+..|||.|+.+...|.
T Consensus 245 ~~IPVIA~GGI~~~~di~kalalG--Ad~V~vGt~f~~t~Es~~ 286 (400)
T 3ffs_A 245 FGIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPG 286 (400)
T ss_dssp TTCCEEEESCCCSHHHHHHHHTTT--CSEEEECGGGTTBTTSSC
T ss_pred cCCCEEecCCCCCHHHHHHHHHcC--CCEEEEChHHhcCCCCCc
Confidence 35789999999 689999999999 579999999999877664
No 35
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=78.43 E-value=2.8 Score=38.28 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=30.9
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.|++.|+++.+.+.++.+.|. .|..++|..+..+.
T Consensus 288 iPvi~~Ggit~e~a~~~l~~G~-aD~V~iGR~~ladP 323 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDAGQ-ADAVAWGKLFIANP 323 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhCc
Confidence 4689999999999999998874 69999999998753
No 36
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=78.34 E-value=2.9 Score=38.14 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---C---CCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcC
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---D---SGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQG 78 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---D---SGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~g 78 (231)
+..++.+|++|.+.|..+.-|=- + ++....+++++|+ + + ++.|+++|+++.+.+.++.++|
T Consensus 254 ~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~----~---~------~iPvi~~Ggi~~~~a~~~l~~g 320 (377)
T 2r14_A 254 EAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQ----R---F------KGGLIYCGNYDAGRAQARLDDN 320 (377)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHH----H---C------CSEEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHH----H---C------CCCEEEECCCCHHHHHHHHHCC
Confidence 46788888888888866544411 0 0111122222222 2 2 3579999999999999999887
Q ss_pred CceeEEeecCcccccC
Q 026886 79 HEVDAFGIGTYLVTCY 94 (231)
Q Consensus 79 a~id~fGVGT~Lvt~~ 94 (231)
. .|..++|..+..+.
T Consensus 321 ~-aD~V~igR~~l~~P 335 (377)
T 2r14_A 321 T-ADAVAFGRPFIANP 335 (377)
T ss_dssp S-CSEEEESHHHHHCT
T ss_pred C-ceEEeecHHHHhCc
Confidence 4 69999999998753
No 37
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=78.12 E-value=2.9 Score=38.14 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=30.8
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.|++.|+++.+.+.++.+.|. .|..++|..+..+.
T Consensus 280 iPvi~~Ggit~e~a~~~l~~g~-aD~V~iGR~~lanP 315 (362)
T 4ab4_A 280 GPYIVNERFDKASANAALASGK-ADAVAFGVPFIANP 315 (362)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhCc
Confidence 4789999999999999998874 68999999998753
No 38
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=78.05 E-value=2.9 Score=34.63 Aligned_cols=50 Identities=12% Similarity=0.085 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 35 ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
..+++|+.+.+. + .++.|++.||++.+.+.++.+.| .|++.||+.++...
T Consensus 165 ~i~~l~~~~~~~-------~-~~~pi~v~GGI~~~n~~~~~~aG--ad~vvvgSaI~~a~ 214 (230)
T 1rpx_A 165 KISDLRKICAER-------G-LNPWIEVDGGVGPKNAYKVIEAG--ANALVAGSAVFGAP 214 (230)
T ss_dssp HHHHHHHHHHHH-------T-CCCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHhc-------C-CCceEEEECCCCHHHHHHHHHcC--CCEEEEChhhhCCC
Confidence 345566666543 3 24689999999999999998888 68999999998753
No 39
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=77.82 E-value=4.4 Score=36.72 Aligned_cols=75 Identities=19% Similarity=0.245 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---CCC-C-hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCC
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---DSG-D-LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---DSG-D-l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga 79 (231)
+..++.++++|.+.|..+..|=- +.+ + ...+.+++|+ + + ++.|++.|+++.+.+.++.+.|.
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~----~---~------~iPvi~~Ggi~~~~a~~~l~~g~ 315 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALRE----A---Y------QGVLIYAGRYNAEKAEQAINDGL 315 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHH----H---C------CSEEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHH----H---C------CCcEEEeCCCCHHHHHHHHHCCC
Confidence 46788999999988866544421 111 1 1223333332 2 2 35899999999999999998874
Q ss_pred ceeEEeecCccccc
Q 026886 80 EVDAFGIGTYLVTC 93 (231)
Q Consensus 80 ~id~fGVGT~Lvt~ 93 (231)
.|..++|+.+..+
T Consensus 316 -aD~V~igR~~i~~ 328 (365)
T 2gou_A 316 -ADMIGFGRPFIAN 328 (365)
T ss_dssp -CSEEECCHHHHHC
T ss_pred -cceehhcHHHHhC
Confidence 6899999999875
No 40
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=77.14 E-value=3.1 Score=35.69 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=31.2
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||+ +.+.+.++.+.| .|..+|||.+..+
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~~G--Ad~V~vg~~~l~~ 276 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYMAG--ASAVAVGTANFAD 276 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHHHT--CSEEEECTHHHHC
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHHcC
Confidence 5789999999 799999998888 7899999999874
No 41
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=77.04 E-value=5 Score=36.32 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---CC--CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCC
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---DS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---DS--GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga 79 (231)
+..++.+|++|.+.|..+..|=. .+ +....+.+++|+ + .++.|++.|+++.+.+.++.+.|.
T Consensus 250 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~----~---------~~iPvi~~Ggit~~~a~~~l~~g~ 316 (364)
T 1vyr_A 250 EADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRE----R---------FHGVIIGAGAYTAEKAEDLIGKGL 316 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHH----H---------CCSEEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHH----H---------CCCCEEEECCcCHHHHHHHHHCCC
Confidence 45688889999888866554421 11 111223333332 2 235899999999999999998874
Q ss_pred ceeEEeecCccccc
Q 026886 80 EVDAFGIGTYLVTC 93 (231)
Q Consensus 80 ~id~fGVGT~Lvt~ 93 (231)
+|..++|..+..+
T Consensus 317 -aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 317 -IDAVAFGRDYIAN 329 (364)
T ss_dssp -CSEEEESHHHHHC
T ss_pred -ccEEEECHHHHhC
Confidence 6899999998875
No 42
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=76.30 E-value=7.9 Score=35.39 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=34.6
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~ 98 (231)
++.|+++||+ +...|.+..+.| .|+.++||.|..+...|.
T Consensus 211 ~iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~f~~t~Esp~ 251 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAPG 251 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSS
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCEEEEChHhhcCCCCCc
Confidence 4689999999 889999999999 489999999999876654
No 43
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=76.30 E-value=2.9 Score=35.56 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=30.4
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.++++||+ +.+.+.++.+.| .|++.|||.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsai~~ 215 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEHG--AWAVTVGSAITR 215 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHhcC
Confidence 5689999999 699999999998 789999999875
No 44
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=76.22 E-value=4.9 Score=34.13 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=32.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHh-cCCceeEEeecCccccc
Q 026886 54 DFEKMSITASNDLNEETLDALNK-QGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~Iv~S~~Lde~~I~~L~~-~ga~id~fGVGT~Lvt~ 93 (231)
.++++.+++.||++++.+.++.+ .| ++++| |+.|+..
T Consensus 163 ~~~~ipvvaiGGI~~~N~~~~l~~~G--a~~v~-gSai~~~ 200 (225)
T 1mxs_A 163 PFGDIRFCPTGGVNPANVRNYMALPN--VMCVG-TTWMLDS 200 (225)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHHSTT--BCCEE-ECTTSCH
T ss_pred hCCCCeEEEECCCCHHHHHHHHhccC--CEEEE-EchhcCc
Confidence 56789999999999999999999 57 68899 9999763
No 45
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=76.13 E-value=3.6 Score=34.97 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=30.3
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.++++||+ +.+.+.++.+.| .|++.|||.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsal~~ 215 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRYG--AWAVTVGSAITR 215 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEehHhcC
Confidence 4689999999 699999999998 789999999875
No 46
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=74.59 E-value=2.6 Score=34.47 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=30.2
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||++ .+.+.++.+.| .|++.||+.|...
T Consensus 198 ~~pvia~GGi~~~~~~~~~~~~G--a~~v~vgsal~~~ 233 (253)
T 1h5y_A 198 RIPVIASGGAGRVEHFYEAAAAG--ADAVLAASLFHFR 233 (253)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CcHHHHHHHHHcC
Confidence 56899999998 58999998877 7899999999764
No 47
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=73.62 E-value=8.7 Score=34.62 Aligned_cols=73 Identities=14% Similarity=0.128 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCC------------ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHHHH
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSG------------DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETL 71 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSG------------Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~~I 71 (231)
+.+++.++++|.+. .. .|=+.+| --..+++++|+.+ ++.|+++|++ +.+.+
T Consensus 229 ~~~~~~~a~~l~~~-vd--~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~t~e~A 292 (343)
T 3kru_A 229 IDMMVEYINMIKDK-VD--LIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-------------NIKTSAVGLITTQELA 292 (343)
T ss_dssp HHHHHHHHHHHTTT-CS--EEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------TCEEEEESSCCCHHHH
T ss_pred HHHHHHHHHHhhcc-cc--EEeccCCceEeeeecccCceeehHHHHHHHhc-------------CcccceeeeeeHHHHH
Confidence 67899999999876 44 3433322 1233444444433 2589999998 58899
Q ss_pred HHHHhcCCceeEEeecCcccccC
Q 026886 72 DALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 72 ~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
.++.+.|. .|..++|..+..+.
T Consensus 293 e~~l~~G~-aD~V~iGR~~lanP 314 (343)
T 3kru_A 293 EEILSNER-ADLVALGRELLRNP 314 (343)
T ss_dssp HHHHHTTS-CSEEEESHHHHHCT
T ss_pred HHHHhchh-hHHHHHHHHHhcCC
Confidence 99988874 69999999998754
No 48
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=73.60 E-value=3 Score=36.24 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 35 ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
-.+++|+++++. |+ ++.|.+-||++++++.++.+.| .|.|=+|+.+..+.
T Consensus 181 KI~~lr~~~~~~-------~~-~~~I~VDGGI~~~ti~~~~~aG--AD~~V~GSaIf~a~ 230 (246)
T 3inp_A 181 KAKEISKWISST-------DR-DILLEIDGGVNPYNIAEIAVCG--VNAFVAGSAIFNSD 230 (246)
T ss_dssp HHHHHHHHHHHH-------TS-CCEEEEESSCCTTTHHHHHTTT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHhc-------CC-CeeEEEECCcCHHHHHHHHHcC--CCEEEEehHHhCCC
Confidence 345677777765 53 3699999999999999999999 57888888887643
No 49
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=73.16 E-value=12 Score=34.61 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=34.9
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~ 98 (231)
++.|++|||+ +...+.+..+.| .|+.++|+.+..+...|.
T Consensus 340 ~ipvia~GGI~~~~di~kala~G--Ad~V~iGr~~l~~~e~~~ 380 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALAAG--AESVMVGSIFAGTEEAPG 380 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSSS
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHhcCCcCCc
Confidence 5789999999 889999999999 689999999998876654
No 50
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=73.06 E-value=5.7 Score=34.26 Aligned_cols=65 Identities=25% Similarity=0.205 Sum_probs=44.9
Q ss_pred cCCCccEEEe----CCC-ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCccc
Q 026886 18 LGYKAVGIRL----DSG-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLV 91 (231)
Q Consensus 18 ~g~~~~GVRl----DSG-Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lv 91 (231)
+|.++.||.. |.+ |+ ..++++++.+... + .++.++++||++ .+.+..+.+ | +|++-||+.|+
T Consensus 173 ~gad~IGvn~~~l~~~~~dl-~~~~~L~~~i~~~-------~-~~~~vIAegGI~s~~dv~~l~~-G--a~gvlVGsAl~ 240 (254)
T 1vc4_A 173 AGAEVLGINNRDLATLHINL-ETAPRLGRLARKR-------G-FGGVLVAESGYSRKEELKALEG-L--FDAVLIGTSLM 240 (254)
T ss_dssp HTCSEEEEESBCTTTCCBCT-THHHHHHHHHHHT-------T-CCSEEEEESCCCSHHHHHTTTT-T--CSEEEECHHHH
T ss_pred cCCCEEEEccccCcCCCCCH-HHHHHHHHhCccc-------c-CCCeEEEEcCCCCHHHHHHHHc-C--CCEEEEeHHHc
Confidence 4667778743 222 43 2334444444321 1 256899999998 999999999 8 78999999998
Q ss_pred ccC
Q 026886 92 TCY 94 (231)
Q Consensus 92 t~~ 94 (231)
...
T Consensus 241 ~~~ 243 (254)
T 1vc4_A 241 RAP 243 (254)
T ss_dssp TSS
T ss_pred CCC
Confidence 754
No 51
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=72.68 E-value=2.1 Score=35.45 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.5
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||++ .+.+.++.+.| .|.+.||+.|..
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~~G--ad~v~vGsal~~ 220 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKINDLG--VAGIVVGGAITR 220 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTC--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEEchHHhC
Confidence 46899999998 99999999998 789999998764
No 52
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=70.86 E-value=3.2 Score=36.36 Aligned_cols=36 Identities=28% Similarity=0.228 Sum_probs=32.5
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.+++.+|++ .+.+.++.+.| +|++.||+.|+...
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~G--adgvlVGsal~~a~ 249 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGAG--ADAVLVGEGLVTSG 249 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHTCS
T ss_pred cCEEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 57899999998 99999999999 78999999998754
No 53
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=70.71 E-value=1.8 Score=35.72 Aligned_cols=35 Identities=11% Similarity=0.327 Sum_probs=31.5
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|++.||++.+.+.++.+.| .|++.||+.+..+
T Consensus 164 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 198 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQAG--ADGIAVMSGIFSS 198 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTS
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEhHHhhCC
Confidence 5689999999999999999988 6899999999765
No 54
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=70.34 E-value=10 Score=29.69 Aligned_cols=38 Identities=16% Similarity=0.361 Sum_probs=28.0
Q ss_pred CCCCCeEEEEeCCCCHHH------HHHHHhcCCceeEEeecCcc
Q 026886 53 PDFEKMSITASNDLNEET------LDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde~~------I~~L~~~ga~id~fGVGT~L 90 (231)
++..++-|++|+|.+.+. +..+.+.|..+.++|||+..
T Consensus 120 ~~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 120 EHVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp TTSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 356788999999986544 56677789999999999765
No 55
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=70.24 E-value=4.5 Score=34.81 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHh--cCCceeEEeecCccccc
Q 026886 37 CEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 37 ~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~--~ga~id~fGVGT~Lvt~ 93 (231)
+++|+++++. ++ ++.|.+-||++++.+.++.+ .| +|.|=+|+.+..+
T Consensus 175 ~~lr~~~~~~-------~~-~~~I~vdGGI~~~~~~~~~~~~aG--ad~~VvGSaIf~~ 223 (237)
T 3cu2_A 175 IQVEKRLGNR-------RV-EKLINIDGSMTLELAKYFKQGTHQ--IDWLVSGSALFSG 223 (237)
T ss_dssp HHHHHHHGGG-------GG-GCEEEEESSCCHHHHHHHHHSSSC--CCCEEECGGGGSS
T ss_pred HHHHHHHHhc-------CC-CceEEEECCcCHHHHHHHHHhCCC--CcEEEEeeHHhCC
Confidence 4455555442 33 35899999999999999999 88 6889999999764
No 56
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=69.96 E-value=12 Score=33.83 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=33.3
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccCCCC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~~~p 97 (231)
++.|+++||+. .+.+.++...| .|+.+|||.+..+...|
T Consensus 256 ~ipVia~GGI~~~~d~~~ala~G--Ad~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 256 NICIIADGGIRFSGDVVKAIAAG--ADSVMIGNLFAGTKESP 295 (404)
T ss_dssp SCEEEEESCCCSHHHHHHHHHHT--CSEEEECHHHHTBTTSS
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCHHhhCHHHhcCCCCC
Confidence 68999999995 78888888888 68999999998876554
No 57
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=68.86 E-value=27 Score=30.46 Aligned_cols=73 Identities=16% Similarity=0.290 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCC-hHHH--HHHHHHHHHHHHHhhCCCCCCCeEEEEe-CCCCHHHHHHHHhcCCce
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGD-LAYL--SCEARKFFRTIEKEFGVPDFEKMSITAS-NDLNEETLDALNKQGHEV 81 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGD-l~~l--s~~~R~~ld~~~~~l~i~g~~~v~Iv~S-~~Lde~~I~~L~~~ga~i 81 (231)
...++.++++.+.|. ..|-+=+|+ +.+. ...+.++++..++++++ .|.+| |.++++.++.|.+.| +
T Consensus 94 eei~~~~~~~~~~G~--~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i------~i~~s~g~~~~e~l~~L~~aG--~ 163 (350)
T 3t7v_A 94 EEIKETCKTLKGAGF--HMVDLTMGEDPYYYEDPNRFVELVQIVKEELGL------PIMISPGLMDNATLLKAREKG--A 163 (350)
T ss_dssp HHHHHHHHHHTTSCC--SEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCS------CEEEECSSCCHHHHHHHHHTT--E
T ss_pred HHHHHHHHHHHHCCC--CEEEEeeCCCCccccCHHHHHHHHHHHHhhcCc------eEEEeCCCCCHHHHHHHHHcC--C
Confidence 455666777766664 455565565 5543 35567777777666653 34556 558999999999998 6
Q ss_pred eEEeecC
Q 026886 82 DAFGIGT 88 (231)
Q Consensus 82 d~fGVGT 88 (231)
+.+.+|-
T Consensus 164 ~~i~i~l 170 (350)
T 3t7v_A 164 NFLALYQ 170 (350)
T ss_dssp EEEECCC
T ss_pred CEEEEee
Confidence 7777653
No 58
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=67.69 E-value=4.3 Score=32.99 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=31.0
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
+..|+++||++.+.+.++.+.| .|++-||+.+...
T Consensus 170 ~~~i~v~GGI~~~~~~~~~~~G--ad~vvvGsai~~~ 204 (220)
T 2fli_A 170 SFDIEVDGGVDNKTIRACYEAG--ANVFVAGSYLFKA 204 (220)
T ss_dssp CCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTS
T ss_pred CceEEEECcCCHHHHHHHHHcC--CCEEEEChHHhCC
Confidence 4689999999999999999888 6899999999775
No 59
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=67.09 E-value=6.4 Score=33.54 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=31.7
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|.+.||++++++.++.+.| .|.|=+|+.+..+
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~aG--Ad~~V~GsaIf~~ 207 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISASHG--ANIIVAGTSIFNA 207 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHHHT--CCEEEESHHHHTC
T ss_pred CCeEEEECCCCHHHHHHHHHcC--CCEEEEeHHHhCC
Confidence 6799999999999999999999 6889999998764
No 60
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=67.04 E-value=5 Score=33.82 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
...+++|++.++. ++ ++.|.+-||++++.+.++.+.| .|.+=||+.+....
T Consensus 158 ~~i~~lr~~~~~~-------~~-~~~I~v~GGI~~~~~~~~~~aG--ad~vvvGSai~~a~ 208 (230)
T 1tqj_A 158 PKIRALRQMCDER-------GL-DPWIEVDGGLKPNNTWQVLEAG--ANAIVAGSAVFNAP 208 (230)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESSCCTTTTHHHHHHT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHHhc-------CC-CCcEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 4456677777765 53 4699999999999999999988 68999999998753
No 61
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=66.33 E-value=4.6 Score=34.29 Aligned_cols=38 Identities=13% Similarity=0.313 Sum_probs=32.0
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
.++++.+++.||++++.+.++.+.|. +++.| |+.|+..
T Consensus 154 ~~~~ipvvaiGGI~~~N~~~~l~agg-a~~v~-gS~i~~~ 191 (224)
T 1vhc_A 154 PYAQLQIMPTGGIGLHNIRDYLAIPN-IVACG-GSWFVEK 191 (224)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHTSTT-BCCEE-ECGGGCH
T ss_pred hCCCCeEEEECCcCHHHHHHHHhcCC-CEEEE-EchhcCc
Confidence 55678999999999999999999832 67888 9998764
No 62
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=66.31 E-value=4.7 Score=34.83 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=31.9
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccc
Q 026886 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 54 g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
.+++++++++||++.+.+.++.+.|+. ..++||.|+.
T Consensus 171 p~p~ip~~ptGGI~~~n~~~~l~aGa~--~~vgGs~l~~ 207 (232)
T 4e38_A 171 PYGDIRLMPTGGITPSNIDNYLAIPQV--LACGGTWMVD 207 (232)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTSTTB--CCEEECGGGC
T ss_pred HhcCCCeeeEcCCCHHHHHHHHHCCCe--EEEECchhcC
Confidence 678999999999999999999999864 4566888864
No 63
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=66.24 E-value=5.1 Score=33.29 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=31.2
Q ss_pred CeEEEEeCCCCH-HHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNE-ETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde-~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||++. +.+.++.+.| .|.+.|||.+...
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~~G--ad~vivGsai~~~ 226 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLKEG--ANGVVVGSALVKI 226 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCEEEEeecCCHHHHHHHHHcC--CCEEEEcHHHHhh
Confidence 468999999998 9999998888 6899999999764
No 64
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=65.70 E-value=3.3 Score=33.77 Aligned_cols=35 Identities=9% Similarity=0.203 Sum_probs=30.8
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||++.+.+.++.+.| .|++.||+.+...
T Consensus 172 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 206 (227)
T 2tps_A 172 SIPIVGIGGITIDNAAPVIQAG--ADGVSMISAISQA 206 (227)
T ss_dssp CCCEEEESSCCTTTSHHHHHTT--CSEEEESHHHHTS
T ss_pred CCCEEEEcCCCHHHHHHHHHcC--CCEEEEhHHhhcC
Confidence 3689999999999999998877 6899999998764
No 65
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=65.64 E-value=2.3 Score=34.26 Aligned_cols=35 Identities=20% Similarity=0.375 Sum_probs=30.9
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||++.+.+.++.+.| .|++.||+.+...
T Consensus 162 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 196 (215)
T 1xi3_A 162 KIPVVAIGGINKDNAREVLKTG--VDGIAVISAVMGA 196 (215)
T ss_dssp SSCEEEESSCCTTTHHHHHTTT--CSEEEESHHHHTS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEhHHHhCC
Confidence 4689999999999999998877 6899999999764
No 66
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=65.53 E-value=4.5 Score=33.99 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=32.2
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
.++++.+++.||++.+.+.++.+.|. +++.| |+.|+..
T Consensus 153 ~~~~ipvvaiGGI~~~n~~~~l~agg-~~~v~-gS~i~~~ 190 (214)
T 1wbh_A 153 PFSQVRFCPTGGISPANYRDYLALKS-VLCIG-GSWLVPA 190 (214)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTSTT-BSCEE-EGGGSCH
T ss_pred hCCCCeEEEECCCCHHHHHHHHhcCC-CeEEE-eccccCh
Confidence 56688999999999999999999832 77888 8888753
No 67
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=64.71 E-value=26 Score=32.84 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=34.4
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~ 98 (231)
++.|+++||+ +...|.+..+.|+ |+..|||.|+.+...|.
T Consensus 332 ~iPVIa~GGI~~~~di~kal~~GA--d~V~vGs~~~~~~Esp~ 372 (490)
T 4avf_A 332 GVPLIADGGIRFSGDLAKAMVAGA--YCVMMGSMFAGTEEAPG 372 (490)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHTC--SEEEECTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCC--CeeeecHHHhcCCCCCC
Confidence 4789999999 8999999988894 89999999998776654
No 68
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.83 E-value=7.3 Score=37.40 Aligned_cols=76 Identities=11% Similarity=0.280 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHhcCCCccEEEe---CC-----------CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHH
Q 026886 5 VPNFCAVALALNDLGYKAVGIRL---DS-----------GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRl---DS-----------GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~ 69 (231)
...+++++++|.+.|..+..|-. +. ++...+.+++|+ . .++.|++.|++ +.+
T Consensus 227 ~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~---------~~iPvi~~Ggi~~~~ 293 (671)
T 1ps9_A 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKG----H---------VSLPLVTTNRINDPQ 293 (671)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTT----S---------CSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHH----h---------cCceEEEeCCCCCHH
Confidence 56889999999999977765521 10 111223332222 1 24679999999 899
Q ss_pred HHHHHHhcCCceeEEeecCcccccC
Q 026886 70 TLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 70 ~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
.+.++.+.|. .|..++|..+..+.
T Consensus 294 ~a~~~l~~g~-aD~V~~gR~~l~~P 317 (671)
T 1ps9_A 294 VADDILSRGD-ADMVSMARPFLADA 317 (671)
T ss_dssp HHHHHHHTTS-CSEEEESTHHHHCT
T ss_pred HHHHHHHcCC-CCEEEeCHHHHhCc
Confidence 9999998874 68999999988753
No 69
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=62.40 E-value=20 Score=32.05 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=30.8
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+++.|+++||+ +.+.+.++.+ | .|+..||+.+..+.
T Consensus 196 ~~iPVianGgI~s~eda~~~l~-G--aD~V~iGRa~l~~P 232 (350)
T 3b0p_A 196 PQLTFVTNGGIRSLEEALFHLK-R--VDGVMLGRAVYEDP 232 (350)
T ss_dssp TTSEEEEESSCCSHHHHHHHHT-T--SSEEEECHHHHHCG
T ss_pred CCCeEEEECCcCCHHHHHHHHh-C--CCEEEECHHHHhCc
Confidence 36799999998 7899999887 6 89999999987753
No 70
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=61.64 E-value=5.7 Score=34.07 Aligned_cols=37 Identities=8% Similarity=0.208 Sum_probs=30.7
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccc
Q 026886 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 54 g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
.+++++++++||+|.+.+.++.+.|+- ..+.|+.|+.
T Consensus 156 p~p~i~~~ptGGI~~~N~~~~l~aGa~--~~vgGs~l~~ 192 (217)
T 3lab_A 156 PFPDIQFCPTGGISKDNYKEYLGLPNV--ICAGGSWLTE 192 (217)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHHSTTB--CCEEESGGGC
T ss_pred hhcCceEEEeCCCCHHHHHHHHHCCCE--EEEEChhhcC
Confidence 788999999999999999999999963 3355777754
No 71
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=61.52 E-value=27 Score=32.03 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=30.9
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.|+++|+++.+.+.++.+.|. .|..++|..+..+.
T Consensus 320 iPvi~~G~i~~~~a~~~l~~g~-aD~V~igR~~l~dP 355 (402)
T 2hsa_B 320 GTFICSGGYTRELGIEAVAQGD-ADLVSYGRLFISNP 355 (402)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHCCC-CceeeecHHHHhCc
Confidence 4689999999999999998874 69999999988753
No 72
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=61.27 E-value=23 Score=31.90 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=35.8
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCcceeEE
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVF 103 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~Vy 103 (231)
++.|++|||+ +...+.+....| .|+.+||+.+..+...|.-.+.|
T Consensus 277 ~ipvia~GGI~~~~dv~kalalG--A~~V~iG~~~l~~~es~~~~~~~ 322 (393)
T 2qr6_A 277 YVHIIADGSIENSGDVVKAIACG--ADAVVLGSPLARAEEAAGKGYFW 322 (393)
T ss_dssp CCEEEECSSCCSHHHHHHHHHHT--CSEEEECGGGGGSTTCTTTTEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCCCCCCceEEE
Confidence 4899999999 688888888888 58999999998876655444444
No 73
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=61.21 E-value=19 Score=28.44 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=28.4
Q ss_pred CCCCeEEEEeCCCC-----HHHHHHHHhcCCceeEEeecCc
Q 026886 54 DFEKMSITASNDLN-----EETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~Iv~S~~Ld-----e~~I~~L~~~ga~id~fGVGT~ 89 (231)
+..++-|++|+|.+ .+.+..+.+.|..+..+|||+.
T Consensus 110 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~ 150 (218)
T 3ibs_A 110 GVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMP 150 (218)
T ss_dssp SCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCT
T ss_pred CCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCC
Confidence 45678999999976 4556667778888999999975
No 74
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=61.04 E-value=20 Score=30.92 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=29.7
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||+ +.+.+.++...| .|..+|||.+..
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~~G--Ad~V~vg~~~l~ 276 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLLCG--ATMLQIGTALHK 276 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHHHh
Confidence 6899999999 778888877888 689999999985
No 75
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=60.45 E-value=35 Score=31.80 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=33.4
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCcceeEEE
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFK 104 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l~~VyK 104 (231)
++.|++|||+ +...+.+....| .|+.++|+.|..+...| -...||
T Consensus 358 ~ipVia~GGI~~~~di~kala~G--Ad~V~iG~~~l~~~e~~-~~~~~~ 403 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALALG--ASTVMMGSLLAATTEAP-GEYFFS 403 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTSTTSS-CC----
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCeeeECHHHHcCCcCC-cceEeE
Confidence 4689999999 478888888888 78999999998876544 344444
No 76
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=60.39 E-value=8.8 Score=35.02 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=30.7
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|++.|+++.+.+.++.+.|. +|..++|..+..+
T Consensus 307 ~iPvi~~G~it~~~a~~~l~~g~-aD~V~igR~~l~~ 342 (379)
T 3aty_A 307 SGVKISNLRYDFEEADQQIREGK-VDAVAFGAKFIAN 342 (379)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCcEEEECCCCHHHHHHHHHcCC-CeEEEecHHHHhC
Confidence 35799999999999999988874 6999999998875
No 77
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=60.03 E-value=18 Score=33.48 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHh-cCCCccEEEe-----------CCCC--hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHH
Q 026886 5 VPNFCAVALALND-LGYKAVGIRL-----------DSGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (231)
Q Consensus 5 vpnai~Va~~L~~-~g~~~~GVRl-----------DSGD--l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~ 69 (231)
+..++.++++|.+ .|..+.=|=- .+|. -..+++++|+.+. .++.|++.|++ +.+
T Consensus 263 ~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~-----------~~iPVI~~GgI~t~e 331 (419)
T 3l5a_A 263 IDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA-----------GRIPLIASGGINSPE 331 (419)
T ss_dssp HHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT-----------TSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC-----------CCCeEEEECCCCCHH
Confidence 5678888988888 7755432210 0111 1124444444431 24679999996 788
Q ss_pred HHHHHHhcCCceeEEeecCcccccC
Q 026886 70 TLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 70 ~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
.+.++.+. +|..++|+.++.+.
T Consensus 332 ~Ae~~L~~---aDlVaiGR~~IanP 353 (419)
T 3l5a_A 332 SALDALQH---ADMVGMSSPFVTEP 353 (419)
T ss_dssp HHHHHGGG---CSEEEESTHHHHCT
T ss_pred HHHHHHHh---CCcHHHHHHHHHCc
Confidence 88888887 79999999998753
No 78
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.98 E-value=5.2 Score=32.94 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=31.7
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 56 ~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
.++.+++.||++.+.+.++.+.| .++++||+.+...
T Consensus 143 ~~iPviaiGGI~~~nv~~~~~~G--a~gVav~s~i~~~ 178 (210)
T 3ceu_A 143 IDSKVMALGGINEDNLLEIKDFG--FGGAVVLGDLWNK 178 (210)
T ss_dssp SSTTEEEESSCCTTTHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCCEEEECCCCHHHHHHHHHhC--CCEEEEhHHhHcC
Confidence 35689999999999999999988 6899999999764
No 79
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=59.57 E-value=8.7 Score=32.16 Aligned_cols=70 Identities=17% Similarity=0.094 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCccEEEeC-------CC-ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhc
Q 026886 7 NFCAVALALNDLGYKAVGIRLD-------SG-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQ 77 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlD-------SG-Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ 77 (231)
+..+.++++.+.|.....+ .+ +| |+ .+.++++ +. .++.|+++||+. .+.+.++.+.
T Consensus 157 ~~~e~~~~~~~~G~~~i~~-t~~~~~g~~~g~~~-~~i~~l~----~~---------~~ipvia~GGI~~~ed~~~~~~~ 221 (266)
T 2w6r_A 157 LLRDWVVEVEKRGAGEILL-TSIDRDGTKSGYDT-EMIRFVR----PL---------TTLPIIASGGAGKMEHFLEAFLA 221 (266)
T ss_dssp EHHHHHHHHHHTTCSEEEE-EETTTTTTCSCCCH-HHHHHHG----GG---------CCSCEEEESCCCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEE-EeecCCCCcCCCCH-HHHHHHH----HH---------cCCCEEEeCCCCCHHHHHHHHHc
Confidence 3566677777778776666 22 12 21 1222222 21 356899999999 5899999887
Q ss_pred CCceeEEeecCccccc
Q 026886 78 GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 78 ga~id~fGVGT~Lvt~ 93 (231)
| +|++-||+.|...
T Consensus 222 G--adgv~vgsal~~~ 235 (266)
T 2w6r_A 222 G--ADAALAASVFHFR 235 (266)
T ss_dssp T--CSEEEESTTTC--
T ss_pred C--CHHHHccHHHHcC
Confidence 7 6899999999764
No 80
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=59.49 E-value=18 Score=29.85 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=30.6
Q ss_pred CeEEEEeCCCCH-HHHHHHHhc---CCceeEEeecCccccc
Q 026886 57 KMSITASNDLNE-ETLDALNKQ---GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde-~~I~~L~~~---ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||++. +.+.++.+. | +|++-||+.+...
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~G--adgv~vG~al~~~ 228 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAG--VEGAIVGKALYAK 228 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGT--EEEEEECHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCC--CceeeeeHHHHcC
Confidence 468999999995 999999988 7 7899999998764
No 81
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=59.38 E-value=39 Score=31.88 Aligned_cols=39 Identities=8% Similarity=0.147 Sum_probs=33.1
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCC
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p 97 (231)
++.|++|||+ +...|.+..+.| .|+..+||.+..+...|
T Consensus 359 ~iPVIa~GGI~~~~di~kala~G--A~~V~vGs~~~~~~es~ 398 (511)
T 3usb_A 359 GIPVIADGGIKYSGDMVKALAAG--AHVVMLGSMFAGVAESP 398 (511)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHhC--chhheecHHHhcCccCc
Confidence 3689999999 889999888889 67999999998876555
No 82
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=58.90 E-value=16 Score=35.56 Aligned_cols=94 Identities=21% Similarity=0.284 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEe
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fG 85 (231)
++...-+.+|-+.|..+.=|..--|. |+.+.+++...++ -++++.|++-|--+.+..+.|.+.|+..--.|
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGh----s~~v~~~i~~ik~-----~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGN----SVYQIEFIKWIKQ-----TYPKIDVIAGNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCC----SHHHHHHHHHHHH-----HCTTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccc----cHHHHHHHHHHHh-----hCCcceEEeccccCHHHHHHHHHcCCCEEeec
Confidence 35566677888888665444333477 3333444444433 24788999999999999999999998777777
Q ss_pred ec------CcccccCCCCcceeEEEEeEE
Q 026886 86 IG------TYLVTCYAQAALGCVFKLVEI 108 (231)
Q Consensus 86 VG------T~Lvt~~~~p~l~~VyKLve~ 108 (231)
|| |+.++.-+.|-+..||+..+.
T Consensus 351 iGpGSiCtTr~v~GvG~PQ~tAi~~~a~~ 379 (556)
T 4af0_A 351 MGSGSICITQEVMAVGRPQGTAVYAVAEF 379 (556)
T ss_dssp SSCSTTBCCTTTCCSCCCHHHHHHHHHHH
T ss_pred CCCCcccccccccCCCCcHHHHHHHHHHH
Confidence 77 445555567888888776554
No 83
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=58.03 E-value=3.9 Score=34.11 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=32.0
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.|++.||++.+.+.++.+.| +|.+=||+.+....
T Consensus 173 ~~pi~v~GGI~~~ni~~~~~aG--aD~vvvGsai~~~~ 208 (228)
T 1h1y_A 173 SLDIEVDGGLGPSTIDVAASAG--ANCIVAGSSIFGAA 208 (228)
T ss_dssp TSEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 6789999999999999999888 79999999998753
No 84
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=57.66 E-value=8.2 Score=33.28 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=28.9
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCceeEEeecCccccc
Q 026886 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 59 ~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
.|+++||+ +.+.+.++.+.| .|++.|||.+..+
T Consensus 211 i~~a~GGI~~~e~i~~~~~aG--adgvvvGsai~~~ 244 (297)
T 2zbt_A 211 VNFAAGGIATPADAALMMHLG--MDGVFVGSGIFKS 244 (297)
T ss_dssp CEEBCSSCCSHHHHHHHHHTT--CSEEEECGGGGGS
T ss_pred EEEeeCCCCCHHHHHHHHHcC--CCEEEEchHHhCC
Confidence 34599999 999999999988 6899999999864
No 85
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=57.25 E-value=33 Score=28.79 Aligned_cols=68 Identities=15% Similarity=0.237 Sum_probs=42.6
Q ss_pred HHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC---HHH----HHHHHhcCCcee
Q 026886 10 AVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN---EET----LDALNKQGHEVD 82 (231)
Q Consensus 10 ~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld---e~~----I~~L~~~ga~id 82 (231)
.+++...+.|-.+.++=. ++|+..+ +++.+. .++.++++||++ .+. +.++.+.|+ +
T Consensus 170 ~~a~~a~~~Gad~i~~~~-~~~~~~l----~~i~~~----------~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga--~ 232 (273)
T 2qjg_A 170 HAARLGAELGADIVKTSY-TGDIDSF----RDVVKG----------CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGA--A 232 (273)
T ss_dssp HHHHHHHHTTCSEEEECC-CSSHHHH----HHHHHH----------CSSCEEEECCSCCSSHHHHHHHHHHHHHHTC--S
T ss_pred HHHHHHHHcCCCEEEECC-CCCHHHH----HHHHHh----------CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCC--c
Confidence 334556667777666542 4554332 222222 246899999998 444 666667784 7
Q ss_pred EEeecCcccccC
Q 026886 83 AFGIGTYLVTCY 94 (231)
Q Consensus 83 ~fGVGT~Lvt~~ 94 (231)
++.||+.+..+.
T Consensus 233 gv~vg~~i~~~~ 244 (273)
T 2qjg_A 233 GVAVGRNIFQHD 244 (273)
T ss_dssp EEECCHHHHTSS
T ss_pred EEEeeHHhhCCC
Confidence 999999997653
No 86
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=55.77 E-value=18 Score=31.20 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=29.9
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccc
Q 026886 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
+++.|+++||+. .+.+.++...| .|..+|||.+..
T Consensus 243 ~~ipvi~~GGI~~~~da~~~l~~G--Ad~V~ig~~~l~ 278 (314)
T 2e6f_A 243 PDKLVFGCGGVYSGEDAFLHILAG--ASMVQVGTALQE 278 (314)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHHT--CSSEEECHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHcC--CCEEEEchhhHh
Confidence 468999999995 88888877888 689999999985
No 87
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=55.56 E-value=28 Score=27.06 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=30.0
Q ss_pred CCCCCeEEEEeCCCC-------HHHHHHHHhcCCceeEEeecCcc
Q 026886 53 PDFEKMSITASNDLN-------EETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Ld-------e~~I~~L~~~ga~id~fGVGT~L 90 (231)
++..++-|++|+|.+ .+.+..+.+.|..+.++|||+..
T Consensus 108 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~ 152 (198)
T 1n3y_A 108 RDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAF 152 (198)
T ss_dssp TTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGG
T ss_pred CCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccc
Confidence 355778899998874 35577888899999999999864
No 88
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=55.34 E-value=30 Score=30.49 Aligned_cols=38 Identities=18% Similarity=0.315 Sum_probs=32.2
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccCCC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQ 96 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~~~ 96 (231)
++.|+++||+. .+.+.++.+.| .|+..|||.+..+...
T Consensus 176 ~iPviaaGGI~~~~dv~~al~~G--A~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 176 NIPVIAAGGIADGRGMAAAFALG--AEAVQMGTRFVASVES 214 (326)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTBSSC
T ss_pred CCCEEEECCCCCHHHHHHHHHhC--CCEEEechHHHcCccc
Confidence 46799999997 99999988888 5899999999887543
No 89
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=55.34 E-value=23 Score=29.76 Aligned_cols=36 Identities=17% Similarity=0.445 Sum_probs=28.8
Q ss_pred CCCCeEEEEeCCCCH------HHHHHHHhcCCceeEEeecCc
Q 026886 54 DFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~Iv~S~~Lde------~~I~~L~~~ga~id~fGVGT~ 89 (231)
+..++-|++|+|.+- +.+..+.+.|..|-++|||..
T Consensus 127 ~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~ 168 (281)
T 4hqf_A 127 NANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQG 168 (281)
T ss_dssp TCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 467889999998753 455667788999999999986
No 90
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=55.25 E-value=5.1 Score=32.31 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=31.3
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.|++.||++.+.+.++.+.| .|.+.||+.++...
T Consensus 158 ~~pi~v~GGI~~~~~~~~~~aG--ad~vvvGsaI~~~~ 193 (207)
T 3ajx_A 158 RVPFSVAGGVKVATIPAVQKAG--AEVAVAGGAIYGAA 193 (207)
T ss_dssp TSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEeeeccCCC
Confidence 4579999999999999999988 58999999997653
No 91
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=55.19 E-value=10 Score=34.52 Aligned_cols=36 Identities=8% Similarity=0.106 Sum_probs=30.5
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.|+++|+++.+.+.++.+.|. +|..++|..+..+.
T Consensus 302 iPvi~~G~i~~~~a~~~l~~g~-aD~V~~gR~~l~~P 337 (376)
T 1icp_A 302 GTFIVAGGYDREDGNRALIEDR-ADLVAYGRLFISNP 337 (376)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHCCC-CcEEeecHHHHhCc
Confidence 4789999999999999988764 68999999888753
No 92
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=55.01 E-value=89 Score=25.90 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcCCCccEEEeCCCChH--HHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCceeE
Q 026886 7 NFCAVALALNDLGYKAVGIRLDSGDLA--YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVDA 83 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlDSGDl~--~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~ 83 (231)
+...+++.+.+.| .++|+..+|--. .-...++.+.+.. + .++.|++|||+. .+.+.++.+.|+. .
T Consensus 133 ~~~~~a~~a~eaG--ad~I~tstg~~~gga~~~~i~~v~~~v-------~-~~ipVia~GGI~t~~da~~~l~aGA~--~ 200 (225)
T 1mzh_A 133 EIKKAVEICIEAG--ADFIKTSTGFAPRGTTLEEVRLIKSSA-------K-GRIKVKASGGIRDLETAISMIEAGAD--R 200 (225)
T ss_dssp HHHHHHHHHHHHT--CSEEECCCSCSSSCCCHHHHHHHHHHH-------T-TSSEEEEESSCCSHHHHHHHHHTTCS--E
T ss_pred HHHHHHHHHHHhC--CCEEEECCCCCCCCCCHHHHHHHHHHh-------C-CCCcEEEECCCCCHHHHHHHHHhCch--H
Confidence 4667777777777 456787764200 0001122333322 2 467999999995 6777777788854 5
Q ss_pred EeecC
Q 026886 84 FGIGT 88 (231)
Q Consensus 84 fGVGT 88 (231)
+|++.
T Consensus 201 iG~s~ 205 (225)
T 1mzh_A 201 IGTSS 205 (225)
T ss_dssp EEESC
T ss_pred HHHcc
Confidence 55543
No 93
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=54.30 E-value=10 Score=30.38 Aligned_cols=37 Identities=19% Similarity=0.298 Sum_probs=28.4
Q ss_pred CCCCCeEEEEeCCCCH--------HHHHHHHhcCCceeEEeecCc
Q 026886 53 PDFEKMSITASNDLNE--------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde--------~~I~~L~~~ga~id~fGVGT~ 89 (231)
++..++-|++|+|-+- +.++.+.+.|..+-++|||+.
T Consensus 113 ~~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~ 157 (202)
T 1ijb_A 113 PEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPH 157 (202)
T ss_dssp TTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTT
T ss_pred CCCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3566788999998752 345677888988999999974
No 94
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=54.17 E-value=8.5 Score=34.41 Aligned_cols=38 Identities=18% Similarity=0.323 Sum_probs=33.2
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCC
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQ 96 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~ 96 (231)
++.|+++||+ |.+.+.++.+.| .|++.|||.+..+.+.
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~~G--Ad~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLAAG--ADAAQLGTAFLATDES 246 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTSTTC
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCccc
Confidence 4689999999 999999999988 6899999999886543
No 95
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=51.92 E-value=4.5 Score=34.82 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=32.2
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.+++-||++.+.+.++.+.| .|++.||+.+..+.
T Consensus 191 ~iPvvAiGGI~~~ni~~~~~aG--a~gvav~sai~~a~ 226 (243)
T 3o63_A 191 DKPWFAIGGINAQRLPAVLDAG--ARRIVVVRAITSAD 226 (243)
T ss_dssp CCCEEEESSCCTTTHHHHHHTT--CCCEEESHHHHTCS
T ss_pred CCCEEEecCCCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 6789999999999999999999 68999999997753
No 96
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=51.91 E-value=11 Score=34.13 Aligned_cols=70 Identities=13% Similarity=0.198 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCCH-----------HHHHHHHhcCCceeEEeecCcccccCC------------
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLNE-----------ETLDALNKQGHEVDAFGIGTYLVTCYA------------ 95 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde-----------~~I~~L~~~ga~id~fGVGT~Lvt~~~------------ 95 (231)
++.+|+.|++.+.-.+-++++++. |+.|. +-++.|+++|.+||+.|+=+|+.....
T Consensus 155 i~~aF~~Ar~a~~~~~dP~a~L~~-NDYn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~~~~l~~ 233 (335)
T 4f8x_A 155 FYLAFKYAQEALAQIGANDVKLYY-NDYGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQA 233 (335)
T ss_dssp HHHHHHHHHHHHHHTTCTTSEEEE-EESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCCCcEEEE-ecccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCCCCHHHHHHHHHH
Confidence 344444444422111346777776 54442 256777889999999999999976421
Q ss_pred CCcceeEEEEeEEC
Q 026886 96 QAALGCVFKLVEIN 109 (231)
Q Consensus 96 ~p~l~~VyKLve~~ 109 (231)
--.+|.-..+.|++
T Consensus 234 ~a~lGl~v~iTElD 247 (335)
T 4f8x_A 234 YIKANLDVAVTELD 247 (335)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHcCCeeEEeecc
Confidence 02356666777776
No 97
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=51.83 E-value=39 Score=29.63 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=32.3
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccCCC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQ 96 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~~~ 96 (231)
++.++++||++ .+.+.++.+.| .|+..|||.+..+...
T Consensus 162 ~iPViaaGGI~~~~~~~~al~~G--AdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 162 SIPVIAAGGIADGEGAAAGFMLG--AEAVQVGTRFVVAKES 200 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTBTTC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEecHHHhcCccc
Confidence 46799999997 99999988888 6899999999887543
No 98
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=51.50 E-value=28 Score=28.03 Aligned_cols=38 Identities=5% Similarity=0.071 Sum_probs=29.2
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCceeEEeecCcc
Q 026886 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde------~~I~~L~~~ga~id~fGVGT~L 90 (231)
++..++-|++|+|-+. +.+..+.+.|..+-++|||+..
T Consensus 122 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~ 165 (223)
T 2b2x_A 122 RGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHY 165 (223)
T ss_dssp TTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGG
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCcc
Confidence 4567888999998763 3456777888889999999753
No 99
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=51.18 E-value=16 Score=28.58 Aligned_cols=38 Identities=11% Similarity=0.210 Sum_probs=29.6
Q ss_pred CCCCCeEEEEeCCCCH-------HHHHHHHhcCCceeEEeecCcc
Q 026886 53 PDFEKMSITASNDLNE-------ETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde-------~~I~~L~~~ga~id~fGVGT~L 90 (231)
++.+++-|++|+|-+- +.+..+.+.|..+-++|||...
T Consensus 104 ~~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~ 148 (194)
T 1mf7_A 104 KNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAF 148 (194)
T ss_dssp TTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGG
T ss_pred CCCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccc
Confidence 3456788999988743 4578888899899999999754
No 100
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=50.46 E-value=28 Score=31.24 Aligned_cols=66 Identities=20% Similarity=0.278 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHH-----------HHHHHHhcCCceeEEeecCcccccCCCC---------
Q 026886 38 EARKFFRTIEKEFGVPDFEKMSITASNDLNEE-----------TLDALNKQGHEVDAFGIGTYLVTCYAQA--------- 97 (231)
Q Consensus 38 ~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~-----------~I~~L~~~ga~id~fGVGT~Lvt~~~~p--------- 97 (231)
-++++|+.|++. -+++++ +.|+.+.+ -++.|.++|++||++|+=.|+......+
T Consensus 160 ~i~~aF~~Ar~a-----dP~a~L-~~NDyn~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~ 233 (348)
T 1w32_A 160 YIDEAFRRARAA-----DPTAEL-YYNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQK 233 (348)
T ss_dssp HHHHHHHHHHHH-----CTTSEE-EEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCCEE-EecccccccCCchHHHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHH
Confidence 356777776652 257676 45666532 2567888999999999988986543211
Q ss_pred ----cceeEEEEeEEC
Q 026886 98 ----ALGCVFKLVEIN 109 (231)
Q Consensus 98 ----~l~~VyKLve~~ 109 (231)
.+|.=.-++|++
T Consensus 234 ~a~~~~Gl~i~ITElD 249 (348)
T 1w32_A 234 IVALSPTLKIKITELD 249 (348)
T ss_dssp HHTTCSSCEEEEEEEE
T ss_pred HhcccCCCeEEEEeCc
Confidence 567777777876
No 101
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=49.86 E-value=44 Score=31.39 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=33.3
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~ 98 (231)
++.|+++||+ +...|.+..+.| .|+..+||.|+.+...|.
T Consensus 334 ~iPVIa~GGI~~~~di~kala~G--Ad~V~iGs~f~~t~Espg 374 (496)
T 4fxs_A 334 GIPVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAPG 374 (496)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSS
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCeEEecHHHhcCCCCCc
Confidence 3689999999 688888888888 479999999998776654
No 102
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=48.63 E-value=30 Score=31.10 Aligned_cols=64 Identities=20% Similarity=0.264 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCC-----------HHHHHHHHhcCCceeEEeecCcccccCCCC----------
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLN-----------EETLDALNKQGHEVDAFGIGTYLVTCYAQA---------- 97 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-----------e~~I~~L~~~ga~id~fGVGT~Lvt~~~~p---------- 97 (231)
++.+|+.|++. .++++++. |+.| .+.|+.|.++|.+||+.|+=+|+... ..|
T Consensus 172 i~~af~~Ar~~-----dP~a~L~~-NDyn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~-~~~~~~~~~~l~~ 244 (341)
T 3niy_A 172 IEKAFRWTKEA-----DPDAILIY-NDYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYR-GLNYDSFRRNLER 244 (341)
T ss_dssp HHHHHHHHHHH-----CTTSEEEE-EESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----CCCceEEe-eccccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecCCC-CCCHHHHHHHHHH
Confidence 56677776652 35767666 5555 24566788899999999999998653 122
Q ss_pred --cceeEEEEeEEC
Q 026886 98 --ALGCVFKLVEIN 109 (231)
Q Consensus 98 --~l~~VyKLve~~ 109 (231)
.+|.=.-++|++
T Consensus 245 ~a~lGl~v~iTElD 258 (341)
T 3niy_A 245 FAKLGLQIYITEMD 258 (341)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHcCCeEEEEecc
Confidence 356666677776
No 103
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=47.37 E-value=18 Score=29.62 Aligned_cols=71 Identities=21% Similarity=0.280 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhcCCCccEEE---eC-C--C-ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCH-HHHHHHHhc-
Q 026886 7 NFCAVALALNDLGYKAVGIR---LD-S--G-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNE-ETLDALNKQ- 77 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVR---lD-S--G-Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde-~~I~~L~~~- 77 (231)
+.++.++++.+.|.....+= .| + | |+ .+.++++ +. .++.|+++||++. +.+.++.+.
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~-~~~~~l~----~~---------~~ipvia~GGI~~~~d~~~~~~~~ 215 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGGPNL-DLLAGVA----DR---------TDAPVIASGGVSSLDDLRAIATLT 215 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCH-HHHHHHH----TT---------CSSCEEEESCCCSHHHHHHHHTTG
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCCCCH-HHHHHHH----Hh---------CCCCEEEECCCCCHHHHHHHHhhc
Confidence 45777777777776655441 12 1 2 21 1222222 11 3568999999995 999999987
Q ss_pred --CCceeEEeecCccccc
Q 026886 78 --GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 78 --ga~id~fGVGT~Lvt~ 93 (231)
| +|++-||+.+...
T Consensus 216 ~~G--ad~v~vG~al~~~ 231 (244)
T 2y88_A 216 HRG--VEGAIVGKALYAR 231 (244)
T ss_dssp GGT--EEEEEECHHHHTT
T ss_pred cCC--CCEEEEcHHHHCC
Confidence 7 7899999998764
No 104
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=47.34 E-value=33 Score=26.22 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=26.2
Q ss_pred CCCeEEEEeCCCC--------HHHHHHHHhcCCceeEEeec
Q 026886 55 FEKMSITASNDLN--------EETLDALNKQGHEVDAFGIG 87 (231)
Q Consensus 55 ~~~v~Iv~S~~Ld--------e~~I~~L~~~ga~id~fGVG 87 (231)
..++-|++|+|-+ .+.+..+.+.|..+-++|||
T Consensus 106 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg 146 (185)
T 3n2n_F 106 TASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK 146 (185)
T ss_dssp EEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS
T ss_pred CCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec
Confidence 4578899999987 34566777888888888888
No 105
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=47.09 E-value=40 Score=27.68 Aligned_cols=74 Identities=18% Similarity=0.150 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhcCCCccEEEeC-CCC---hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCce
Q 026886 7 NFCAVALALNDLGYKAVGIRLD-SGD---LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlD-SGD---l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~i 81 (231)
+.+++|+++.+.|....-++ | +++ .......++ +.+++ .++.++++|+++ .+.+.++.+.| +
T Consensus 32 d~~~~a~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~----~i~~~------~~iPvi~~Ggi~~~~~~~~~~~~G--a 98 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFL-DISATHEERAILLDVVA----RVAER------VFIPLTVGGGVRSLEDARKLLLSG--A 98 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEE-ECCSSTTCHHHHHHHHH----HHHTT------CCSCEEEESSCCSHHHHHHHHHHT--C
T ss_pred CHHHHHHHHHHcCCCEEEEE-cCCccccCccccHHHHH----HHHHh------CCCCEEEECCcCCHHHHHHHHHcC--C
Confidence 57888999998897766565 2 111 112222222 22221 356899999987 78889988888 7
Q ss_pred eEEeecCccccc
Q 026886 82 DAFGIGTYLVTC 93 (231)
Q Consensus 82 d~fGVGT~Lvt~ 93 (231)
|..-+|+.+...
T Consensus 99 d~V~lg~~~l~~ 110 (252)
T 1ka9_F 99 DKVSVNSAAVRR 110 (252)
T ss_dssp SEEEECHHHHHC
T ss_pred CEEEEChHHHhC
Confidence 899999988764
No 106
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=46.11 E-value=50 Score=25.31 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=39.8
Q ss_pred CCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-----CHH-HHHHHHhcCCceeEEeecCccc
Q 026886 19 GYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-----NEE-TLDALNKQGHEVDAFGIGTYLV 91 (231)
Q Consensus 19 g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-----de~-~I~~L~~~ga~id~fGVGT~Lv 91 (231)
+-...|+=.=++.-....+++.+.|++. |..+++|++-|.. |.. .-..+.+.|+ -..|+.||...
T Consensus 54 ~~d~v~lS~~~~~~~~~~~~~i~~l~~~-------g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~-d~~~~~g~~~~ 124 (137)
T 1ccw_A 54 KADAILVSSLYGQGEIDCKGLRQKCDEA-------GLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY-DRVYAPGTPPE 124 (137)
T ss_dssp TCSEEEEEECSSTHHHHHTTHHHHHHHT-------TCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC-SEECCTTCCHH
T ss_pred CCCEEEEEecCcCcHHHHHHHHHHHHhc-------CCCCCEEEEECCCcCchHhhhhhHHHHHHCCC-CEEECCCCCHH
Confidence 4455555554555455566677777776 6667888888864 122 2344677775 34677887653
No 107
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=46.05 E-value=81 Score=27.39 Aligned_cols=34 Identities=9% Similarity=0.076 Sum_probs=28.6
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||+ +.+.+.++.+.| .|..+|||.+..
T Consensus 289 ~ipVi~~GGI~~~~da~~~l~~G--Ad~V~igr~~l~ 323 (336)
T 1f76_A 289 RLPIIGVGGIDSVIAAREKIAAG--ASLVQIYSGFIF 323 (336)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEeeHHHHh
Confidence 5789999998 578888888888 689999998764
No 108
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=45.88 E-value=16 Score=32.14 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=31.5
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.+|+.+|+ +.+.+..+.+.| +|+|-||+.|+...
T Consensus 220 ~~~vIaesGI~t~edv~~l~~~G--a~gvLVG~almr~~ 256 (272)
T 3tsm_A 220 DRLLVGESGIFTHEDCLRLEKSG--IGTFLIGESLMRQH 256 (272)
T ss_dssp TSEEEEESSCCSHHHHHHHHTTT--CCEEEECHHHHTSS
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHcCCc
Confidence 5678888888 999999999999 78999999998764
No 109
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=45.36 E-value=23 Score=31.49 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=30.4
Q ss_pred eEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccC
Q 026886 58 MSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
+.++++||+ +.+.+..+.+.| .|++-||+.|..+.
T Consensus 210 VivvA~GGI~t~~dv~~~~~~G--AdgVlVGsai~~a~ 245 (297)
T 4adt_A 210 VVNFAAGGIATPADAAMCMQLG--MDGVFVGSGIFESE 245 (297)
T ss_dssp SEEEEESCCCSHHHHHHHHHTT--CSCEEESHHHHTSS
T ss_pred eEEEecCCCCCHHHHHHHHHcC--CCEEEEhHHHHcCC
Confidence 455699999 999999999999 78999999998753
No 110
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=44.85 E-value=43 Score=28.05 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=29.4
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCceeEEeecCcc
Q 026886 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde------~~I~~L~~~ga~id~fGVGT~L 90 (231)
++.+++-|++|+|-+- +.+..+.+.|..+-++|||...
T Consensus 123 ~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~ 166 (266)
T 4hqo_A 123 EKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGI 166 (266)
T ss_dssp TTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSC
T ss_pred CCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCccc
Confidence 4566889999998742 4556677889999999999843
No 111
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=44.63 E-value=66 Score=24.36 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=26.4
Q ss_pred CCCCeEEEEeCCCC--------HHHHHHHHhcCCceeEEeecC
Q 026886 54 DFEKMSITASNDLN--------EETLDALNKQGHEVDAFGIGT 88 (231)
Q Consensus 54 g~~~v~Iv~S~~Ld--------e~~I~~L~~~ga~id~fGVGT 88 (231)
+..++-|++|+|.+ ...+..+.+.|..+..+|||.
T Consensus 102 ~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~ 144 (182)
T 1shu_X 102 KTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLD 144 (182)
T ss_dssp GSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCc
Confidence 45788999999984 224556677888899999983
No 112
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=44.46 E-value=14 Score=32.33 Aligned_cols=37 Identities=27% Similarity=0.364 Sum_probs=31.7
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCC
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~ 95 (231)
++.|+++||+ |.+.+.++.+.| .|+..|||.+..+..
T Consensus 172 ~iPviaaGGI~~~~~v~~al~~G--AdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 172 RVPIIASGGFADGRGLVAALALG--ADAINMGTRFLATRE 209 (328)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTSSS
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCcc
Confidence 4689999999 788998888878 689999999988754
No 113
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=44.42 E-value=9.7 Score=34.29 Aligned_cols=75 Identities=31% Similarity=0.339 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCC-------CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcC
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDS-------GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQG 78 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDS-------GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~g 78 (231)
..++.+++++.+.|..+.++.-.+ ++...+++++|+.. +..|++.+..+.+.+.++.+.|
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~-------------~~~v~~~g~~~~~~ae~~l~~G 307 (358)
T 4a3u_A 241 QVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVF-------------KPPLVLNQDYTFETAQAALDSG 307 (358)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHC-------------CSCEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhc-------------CCcEEEeCCCCHHHHHHHHHcC
Confidence 456778888888888777775322 22344566665431 2367788999999999999987
Q ss_pred CceeEEeecCcccccC
Q 026886 79 HEVDAFGIGTYLVTCY 94 (231)
Q Consensus 79 a~id~fGVGT~Lvt~~ 94 (231)
. .|..|+|-.+..+.
T Consensus 308 ~-aD~V~~gR~~ladP 322 (358)
T 4a3u_A 308 V-ADAISFGRPFIGNP 322 (358)
T ss_dssp S-CSEEEESHHHHHCT
T ss_pred C-ceEeHhhHHHHhCh
Confidence 5 69999999998864
No 114
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=44.05 E-value=9.5 Score=31.46 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=31.1
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|++.||++.+.+.++.+.| .|.+.||+.++..
T Consensus 166 ~~pi~v~GGI~~~~~~~~~~aG--Ad~vvvGsaI~~a 200 (218)
T 3jr2_A 166 GIELSITGGIVPEDIYLFEGIK--TKTFIAGRALAGA 200 (218)
T ss_dssp TCEEEEESSCCGGGGGGGTTSC--EEEEEESGGGSHH
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEchhhcCC
Confidence 5689999999999999999988 7899999998754
No 115
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=44.01 E-value=39 Score=26.83 Aligned_cols=37 Identities=5% Similarity=0.071 Sum_probs=28.5
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCceeEEeecCc
Q 026886 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde------~~I~~L~~~ga~id~fGVGT~ 89 (231)
++..++-|++|+|-+. +.+..+.+.|..+-++|||+.
T Consensus 107 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 107 RGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGS 149 (213)
T ss_dssp TTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHH
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccc
Confidence 4567888999998753 345677788988899999975
No 116
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=42.76 E-value=51 Score=27.05 Aligned_cols=71 Identities=14% Similarity=0.202 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCccEEEeC-------CC-ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhc
Q 026886 7 NFCAVALALNDLGYKAVGIRLD-------SG-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQ 77 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlD-------SG-Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ 77 (231)
+..+.++++.+.|.....+ .+ +| | ..+.+++++.. ++.+++|||+. .+.+.++.+.
T Consensus 145 ~~~e~~~~~~~~G~~~i~~-t~~~~~g~~~g~~-~~~i~~l~~~~-------------~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVH-TEIEKDGTLQEHD-FSLTKKIAIEA-------------EVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEE-EETTHHHHTCCCC-HHHHHHHHHHH-------------TCEEEEESSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEE-EeecccccCCcCC-HHHHHHHHHhc-------------CCcEEEECCCCCHHHHHHHHhc
Confidence 4567777777888776555 23 22 2 22223333222 45899999999 5999999876
Q ss_pred -----CCceeEEeecCccccc
Q 026886 78 -----GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 78 -----ga~id~fGVGT~Lvt~ 93 (231)
|. +|+.=||+.|...
T Consensus 210 ~~~~~G~-adgv~vgsal~~~ 229 (241)
T 1qo2_A 210 HTETNGL-LKGVIVGRAFLEG 229 (241)
T ss_dssp HHHTTTS-EEEEEECHHHHTT
T ss_pred ccccCCe-EeEEEeeHHHHcC
Confidence 52 6888999998765
No 117
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=42.65 E-value=76 Score=27.18 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCCC-hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEe-CCCCHHHHHHHHhcCCcee
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSGD-LAYLSCEARKFFRTIEKEFGVPDFEKMSITAS-NDLNEETLDALNKQGHEVD 82 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSGD-l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S-~~Lde~~I~~L~~~ga~id 82 (231)
....++.++++.+.|. ..|-+=+|. +..-...+.++++.+++. .+.|.+| +.++++.+..|.+.| ++
T Consensus 86 ~eei~~~i~~~~~~g~--~~i~~~gGe~p~~~~~~~~~li~~i~~~-------~~~i~~s~g~l~~e~l~~L~~ag--~~ 154 (348)
T 3iix_A 86 PEEIVERARLAVQFGA--KTIVLQSGEDPYXMPDVISDIVKEIKKM-------GVAVTLSLGEWPREYYEKWKEAG--AD 154 (348)
T ss_dssp HHHHHHHHHHHHHTTC--SEEEEEESCCGGGTTHHHHHHHHHHHTT-------SCEEEEECCCCCHHHHHHHHHHT--CC
T ss_pred HHHHHHHHHHHHHCCC--CEEEEEeCCCCCccHHHHHHHHHHHHhc-------CceEEEecCCCCHHHHHHHHHhC--CC
Confidence 4566777777777774 467776676 433226677777777542 4566666 567999999999988 45
Q ss_pred EEeec
Q 026886 83 AFGIG 87 (231)
Q Consensus 83 ~fGVG 87 (231)
.+-+|
T Consensus 155 ~v~i~ 159 (348)
T 3iix_A 155 RYLLR 159 (348)
T ss_dssp EEECC
T ss_pred EEeee
Confidence 55554
No 118
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=42.60 E-value=5.2 Score=33.46 Aligned_cols=36 Identities=25% Similarity=0.176 Sum_probs=0.0
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.++++||+. .+.+.++.+.| +|+.-||+.|....
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~G--ad~v~vg~al~~~p 236 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLRG--ADKVSINTAAVENP 236 (247)
T ss_dssp ---------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CcHhhccHHHHcCc
Confidence 46899999997 89999999988 78999999997753
No 119
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=40.84 E-value=97 Score=26.44 Aligned_cols=64 Identities=22% Similarity=0.151 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCc
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE 80 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~ 80 (231)
...++.++++|-+.|.+..=||+.|.+-....+++|+.+ +++.|-+..=++.+.++...+.|+.
T Consensus 45 ~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~------------~~~~iGaGTVlt~~~a~~Ai~AGA~ 108 (232)
T 4e38_A 45 AEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ------------PEMLIGAGTILNGEQALAAKEAGAT 108 (232)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC------------TTCEEEEECCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC------------CCCEEeECCcCCHHHHHHHHHcCCC
Confidence 456889999999999998888888888444443333332 2344444455566666666665553
No 120
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=40.76 E-value=53 Score=28.93 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=48.4
Q ss_pred HHHHHHHhcCCCccEEEe--C-CCChHHHHHHHHHHHHHHHHhhCCCCCCCeE-EEEeCCCCH----HHHHHHHhcCCce
Q 026886 10 AVALALNDLGYKAVGIRL--D-SGDLAYLSCEARKFFRTIEKEFGVPDFEKMS-ITASNDLNE----ETLDALNKQGHEV 81 (231)
Q Consensus 10 ~Va~~L~~~g~~~~GVRl--D-SGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~-Iv~S~~Lde----~~I~~L~~~ga~i 81 (231)
..++++.++|-.+.++=. | +|++..+.+-++ .++.. ..+. |++|||.++ +.+....+.| .
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~-~~~~~---------~~~P~Vv~aGG~~~~~~~~~~~~a~~aG--a 248 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYGKGARSDLLTASQ-RLNGH---------INMPWVILSSGVDEKLFPRAVRVAMEAG--A 248 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHH-HHHHT---------CCSCEEECCTTSCTTTHHHHHHHHHHTT--C
T ss_pred HHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHH-hcccc---------CCCCeEEEecCCCHHHHHHHHHHHHHcC--C
Confidence 346677778877776654 2 356555543333 34432 3446 999999988 4578887777 4
Q ss_pred eEEeecCccccc
Q 026886 82 DAFGIGTYLVTC 93 (231)
Q Consensus 82 d~fGVGT~Lvt~ 93 (231)
+++-||.++...
T Consensus 249 ~Gv~vGRaI~q~ 260 (304)
T 1to3_A 249 SGFLAGRAVWSS 260 (304)
T ss_dssp CEEEESHHHHGG
T ss_pred eEEEEehHHhCc
Confidence 899999999764
No 121
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=40.72 E-value=1.5e+02 Score=26.93 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=33.4
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCCcc
Q 026886 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAAL 99 (231)
Q Consensus 59 ~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p~l 99 (231)
.|+++||+ +...|....+.| .|+..|||.|..+...|.-
T Consensus 201 PVIAdGGI~~~~di~kALa~G--Ad~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALAFG--ADFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp EEEEESCCCSHHHHHHHHHTT--CSEEEESGGGTTBTTSSSC
T ss_pred CEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCccCCce
Confidence 89999999 588898888889 5899999999988766643
No 122
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=40.56 E-value=33 Score=28.81 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=30.9
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|++.+|++ .+.+.++.+.| .|++-|||.++..
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~~G--AdgvvVGSai~~~ 236 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQWG--ADGVIIGSAMVRQ 236 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcC--CCEEEEChHHHhH
Confidence 46899999999 99999999988 5889999998764
No 123
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=40.47 E-value=2.1e+02 Score=26.01 Aligned_cols=40 Identities=13% Similarity=0.099 Sum_probs=31.8
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccccCCCC
Q 026886 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 56 ~~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~~~~p 97 (231)
.++.|++|||+ +...+.++.+.| .|+.++|+.+..+...|
T Consensus 335 ~~ipvia~GGi~~~~di~kal~~G--A~~v~vG~~~~~~~e~~ 375 (491)
T 1zfj_A 335 YGKTIIADGGIKYSGDIVKALAAG--GNAVMLGSMFAGTDEAP 375 (491)
T ss_dssp TTCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBSSCC
T ss_pred cCCCEEeeCCCCCHHHHHHHHHcC--CcceeeCHHhhCCCcCc
Confidence 35789999997 677788888888 67999999998765444
No 124
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=39.90 E-value=76 Score=25.83 Aligned_cols=49 Identities=18% Similarity=0.117 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC
Q 026886 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL 66 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L 66 (231)
|+-.++..|.+.|+....+++=.=|...+...++++++++ + -|+.|||+
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~----------D-lVittGG~ 72 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVS----------D-LVVSSGGL 72 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHC----------S-EEEEESCC
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcC----------C-EEEEcCCC
Confidence 6667788888899887776665556667766677766652 3 66677765
No 125
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=39.89 E-value=34 Score=30.18 Aligned_cols=49 Identities=18% Similarity=0.261 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCC------------HHHHHHHHhcCCceeEEeecCccccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLN------------EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld------------e~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.+|+.|++. -++++++. |+.+ .+.++.|.++|++||++|+=+|+.+.
T Consensus 151 i~~af~~Ar~~-----dP~a~L~~-Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~ 211 (313)
T 1v0l_A 151 IEVAFRTARAA-----DPSAKLCY-NDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSG 211 (313)
T ss_dssp HHHHHHHHHHH-----CTTSEEEE-EESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTT
T ss_pred HHHHHHHHHhh-----CCCCEEEE-eccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCC
Confidence 45666666552 25667775 4433 34566778899999999998888654
No 126
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=39.66 E-value=67 Score=28.18 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=29.7
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCccccc
Q 026886 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 56 ~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
.++.|+++||+. .+.+.+....| .|+.+|||.++..
T Consensus 250 ~~ipvia~GGI~~~~d~~k~l~~G--Ad~V~iG~~~l~~ 286 (349)
T 1p0k_A 250 PASTMIASGGLQDALDVAKAIALG--ASCTGMAGHFLKA 286 (349)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHHH
Confidence 468999999985 78888877778 5899999988764
No 127
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=38.90 E-value=75 Score=25.26 Aligned_cols=57 Identities=12% Similarity=0.063 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHH
Q 026886 9 CAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEET 70 (231)
Q Consensus 9 i~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~ 70 (231)
-.+++.|.++|++-.++=....+... +++-.+-|.++-++. |++ ..++..++.+.+.
T Consensus 109 ~~a~~~L~~~G~~~i~~i~~~~~~~~-~~~R~~gf~~~l~~~---~~~-~~~~~~~~~~~~~ 165 (272)
T 3o74_A 109 RQLAASLLSSAPRSIALIGARPELSV-SQARAGGFDEALQGY---TGE-VRRYQGEAFSREC 165 (272)
T ss_dssp HHHHHHHHTTCCSEEEEEEECTTSHH-HHHHHHHHHHHTTTC---CSE-EEEEEESSSSHHH
T ss_pred HHHHHHHHHCCCcEEEEEecCCCCcc-HHHHHHHHHHHHHHc---CCC-hheeecCCCCHHH
Confidence 34556677788775555432222222 222222333332233 333 3556677777654
No 128
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=38.61 E-value=56 Score=25.63 Aligned_cols=36 Identities=8% Similarity=0.055 Sum_probs=27.6
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCceeEEeecC
Q 026886 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGT 88 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde------~~I~~L~~~ga~id~fGVGT 88 (231)
++.+++-|++|+|-+. +.+..+.+.|..+-++|||+
T Consensus 106 ~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 106 RSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLG 147 (200)
T ss_dssp TTSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEecc
Confidence 4567788999988752 45677888898888889965
No 129
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=38.46 E-value=21 Score=31.06 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=28.5
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCceeEEeecCccccc
Q 026886 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 59 ~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
-++++||+ +.+.+.++.+.| .|++.||+.+..+
T Consensus 211 i~~a~GGI~~~~d~~~~~~~G--adgV~vGsai~~~ 244 (305)
T 2nv1_A 211 VNFAAGGVATPADAALMMQLG--ADGVFVGSGIFKS 244 (305)
T ss_dssp CEEBCSCCCSHHHHHHHHHTT--CSCEEECGGGGGS
T ss_pred EEEeccCCCCHHHHHHHHHcC--CCEEEEcHHHHcC
Confidence 34499999 999999999888 6899999999864
No 130
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=38.19 E-value=51 Score=30.85 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCC-eEEEEeCCCCHHHHHHHHhcCCceeEE
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-MSITASNDLNEETLDALNKQGHEVDAF 84 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~-v~Iv~S~~Lde~~I~~L~~~ga~id~f 84 (231)
.+++..+.+|.+.|.++..|-.+.|+...+...+ +.+.+. + ++ +.+++.+-.+.+.++.+.+.|+..-..
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~---~-----~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V 311 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREK---Y-----GDKVKVGAGNIVDGEGFRYLADAGADFIKI 311 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHH---H-----GGGSCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHh---C-----CCCceEeeccccCHHHHHHHHHhCCCeEEe
Confidence 4567777788877887777766778765543333 333332 2 34 688899999999999999999874444
Q ss_pred eec
Q 026886 85 GIG 87 (231)
Q Consensus 85 GVG 87 (231)
|+|
T Consensus 312 g~~ 314 (503)
T 1me8_A 312 GIG 314 (503)
T ss_dssp CSS
T ss_pred ccc
Confidence 773
No 131
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=38.11 E-value=49 Score=29.55 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCC----------HHHHHHHHhcCCceeEEeecCcccccCCC-----------C
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLN----------EETLDALNKQGHEVDAFGIGTYLVTCYAQ-----------A 97 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld----------e~~I~~L~~~ga~id~fGVGT~Lvt~~~~-----------p 97 (231)
++.+|+.|++. -++++++. |+.| .+-|+.|.++|.+||+.|+=.|+...... .
T Consensus 157 i~~aF~~Ar~a-----dP~a~L~~-NDyn~~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a 230 (331)
T 3emz_A 157 LVQAFNMAHEA-----DPNALLFY-NDYNETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYA 230 (331)
T ss_dssp HHHHHHHHHHH-----CTTSEEEE-EESSCSSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-----CCCceEEe-ccccccChHHHHHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHH
Confidence 55666666552 25666665 4444 24567788899999999999998654211 2
Q ss_pred cceeEEEEeEEC
Q 026886 98 ALGCVFKLVEIN 109 (231)
Q Consensus 98 ~l~~VyKLve~~ 109 (231)
.+|.=.-+.|++
T Consensus 231 ~lGl~v~iTElD 242 (331)
T 3emz_A 231 SLDVQLHVTELD 242 (331)
T ss_dssp TTSCEEEEEEEE
T ss_pred HcCCcEEEeecc
Confidence 467777778876
No 132
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=37.91 E-value=39 Score=27.75 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=30.2
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
++.++++||+. .+.+.++.+.| +|++=||+.+....
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vgsal~~~~ 232 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQAG--AEAALAASVFHFGE 232 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTS
T ss_pred CCCEEEeCCCCCHHHHHHHHHCC--CHHHHHHHHHHcCC
Confidence 46899999999 59999998877 68999999997653
No 133
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=37.40 E-value=1.5e+02 Score=23.35 Aligned_cols=73 Identities=19% Similarity=0.101 Sum_probs=47.2
Q ss_pred chHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeE
Q 026886 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDA 83 (231)
Q Consensus 4 Gvpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~ 83 (231)
-..++.++++++.+.|..+..|=+.+.+.....+++|+.+. .++.|-++.-.|.+.+....+.|+. .
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~-----------~~~~ig~~~v~~~~~~~~a~~~Gad--~ 86 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE-----------KGAIIGAGTVTSVEQCRKAVESGAE--F 86 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH-----------TTCEEEEESCCSHHHHHHHHHHTCS--E
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC-----------CCcEEEecccCCHHHHHHHHHcCCC--E
Confidence 35788899999998887766664455554333444454431 2346667666788888888888854 4
Q ss_pred EeecCcc
Q 026886 84 FGIGTYL 90 (231)
Q Consensus 84 fGVGT~L 90 (231)
. |+..+
T Consensus 87 i-v~~~~ 92 (205)
T 1wa3_A 87 I-VSPHL 92 (205)
T ss_dssp E-ECSSC
T ss_pred E-EcCCC
Confidence 4 55443
No 134
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=37.12 E-value=1.1e+02 Score=21.55 Aligned_cols=66 Identities=14% Similarity=-0.001 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEE---EEeCCCCHHHHHHHH
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI---TASNDLNEETLDALN 75 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~I---v~S~~Lde~~I~~L~ 75 (231)
|.--++...|.++|..+.-+-+|.-+.... .+++++..+..+....+-+.| -.-++.|++.|.++.
T Consensus 33 p~C~~ak~~L~~~~i~y~~vdI~~~~~~~~----~~~~~~l~~~~g~~~vP~l~i~~~~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 33 VWCKKTKKLLTDLGVDFDYVYVDRLEGKEE----EEAVEEVRRFNPSVSFPTTIINDEKAIVGFKEKEIRESL 101 (103)
T ss_dssp HHHHHHHHHHHHHTBCEEEEEGGGCCHHHH----HHHHHHHHHHCTTCCSCEEEETTTEEEESCCHHHHHHHT
T ss_pred chHHHHHHHHHHcCCCcEEEEeeccCcccH----HHHHHHHHHhCCCCccCEEEECCCEEEEcCCHHHHHHHh
Confidence 333444445677777777777776442221 122222222234444443222 122357777777664
No 135
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=36.83 E-value=87 Score=24.17 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=25.4
Q ss_pred CCCCeEEEEeCCCC----HHHHHHHHhcCCceeEEeecCc
Q 026886 54 DFEKMSITASNDLN----EETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~Iv~S~~Ld----e~~I~~L~~~ga~id~fGVGT~ 89 (231)
+..++-|++++|-. .+.+..+.+.|..+.++|||..
T Consensus 107 ~~~~~vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~~ 146 (189)
T 1atz_A 107 GASKAVVILVTDVSVDSVDAAADAARSNRVTVFPIGIGDR 146 (189)
T ss_dssp TSEEEEEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESSS
T ss_pred CCCcEEEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCCc
Confidence 34455566776543 4556777888989999999975
No 136
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=36.09 E-value=19 Score=32.93 Aligned_cols=49 Identities=18% Similarity=0.258 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCCH------------HHHHHHHhcCCceeEEeecCccccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLNE------------ETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde------------~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.+|+.|++. -++++++. |+.+. +-++.|.++|++||+.|+=.|+...
T Consensus 151 i~~af~~Ar~~-----dP~a~l~~-Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~ 211 (436)
T 2d1z_A 151 IEVAFRTARAA-----DPAAKLCY-NDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSG 211 (436)
T ss_dssp HHHHHHHHHHH-----CTTSEEEE-EESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTT
T ss_pred HHHHHHHHHhh-----CCCCEEEE-eccccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCC
Confidence 45666666552 25667755 54432 2277788899999999998887654
No 137
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=35.79 E-value=70 Score=26.85 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCCC
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSGD 31 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSGD 31 (231)
...++.++++|-+.|.++.=+|..+-+
T Consensus 37 ~~~~~~~~~al~~gGv~~iel~~k~~~ 63 (225)
T 1mxs_A 37 EEDILPLADALAAGGIRTLEVTLRSQH 63 (225)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEESSSTH
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCcc
Confidence 457889999999999999999987654
No 138
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=35.26 E-value=1.7e+02 Score=27.16 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=28.7
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||+ +.+.+.+....| .|..+|||.+.-
T Consensus 373 ~iPVIg~GGI~s~~DA~e~l~aG--Ad~Vqigrall~ 407 (443)
T 1tv5_A 373 QIPIIASGGIFSGLDALEKIEAG--ASVCQLYSCLVF 407 (443)
T ss_dssp CSCEEEESSCCSHHHHHHHHHTT--EEEEEESHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHh
Confidence 6789999997 677888888888 799999999764
No 139
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=35.24 E-value=37 Score=29.95 Aligned_cols=48 Identities=17% Similarity=0.194 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCCH----------HHHHHHHhcCCceeEEeecCcccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLNE----------ETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde----------~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.+|+.|++. -++++++ .|+.|. +.+++|.++|.+||+.|+=+|+..
T Consensus 158 i~~af~~Ar~~-----dP~a~L~-~Ndyn~~~~~k~~~~~~~v~~l~~~g~~idgiG~Q~H~~~ 215 (331)
T 1n82_A 158 MEQAFLYAYEA-----DPDALLF-YNDYNECFPEKREKIFALVKSLRDKGIPIHGIGMQAHWSL 215 (331)
T ss_dssp HHHHHHHHHHH-----CTTSEEE-EEESSTTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEES
T ss_pred HHHHHHHHHHH-----CCCCEEE-EecccCCCchhHHHHHHHHHHHHHCCCccceEEeceecCC
Confidence 56677776552 3566664 566552 446678889999999999888854
No 140
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=35.21 E-value=1.6e+02 Score=23.92 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCceeEEe
Q 026886 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fG 85 (231)
+.+++|+++.+.|....-|+--+++-.... ..-+.+.+.++ ..++.+++.|+++ .+.+.++.+.| .|...
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~-~~~~~i~~i~~------~~~ipvi~~ggI~~~~~~~~~~~~G--ad~V~ 101 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRK-TMLELVEKVAE------QIDIPFTVGGGIHDFETASELILRG--ADKVS 101 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHH-HHHHHHHHHHT------TCCSCEEEESSCCSHHHHHHHHHTT--CSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCc-ccHHHHHHHHH------hCCCCEEEeCCCCCHHHHHHHHHcC--CCEEE
Confidence 578889999999987766664344321111 11122222222 1346788888887 56688888888 67888
Q ss_pred ecCccccc
Q 026886 86 IGTYLVTC 93 (231)
Q Consensus 86 VGT~Lvt~ 93 (231)
+|+.+...
T Consensus 102 lg~~~l~~ 109 (253)
T 1thf_D 102 INTAAVEN 109 (253)
T ss_dssp ESHHHHHC
T ss_pred EChHHHhC
Confidence 99987664
No 141
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=34.08 E-value=71 Score=28.60 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=29.0
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||+ +.+.+.++...| .|+.+||+.+..
T Consensus 280 ~ipvia~GGI~~~~D~~k~l~~G--AdaV~iGr~~l~ 314 (370)
T 1gox_A 280 RIPVFLDGGVRRGTDVFKALALG--AAGVFIGRPVVF 314 (370)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHcC--CCEEeecHHHHH
Confidence 6899999999 666888888888 689999998864
No 142
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=33.80 E-value=1.3e+02 Score=26.32 Aligned_cols=74 Identities=9% Similarity=0.051 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCC-C--ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCC-CCHHHHHHHHhcCCce
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDS-G--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASND-LNEETLDALNKQGHEV 81 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDS-G--Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~-Lde~~I~~L~~~ga~i 81 (231)
...++.++++.+.|. ..|-+-. | ........+.++++.+++ . |+ .|.++++ ++++.++.|.+.|...
T Consensus 102 eei~~~~~~~~~~g~--~~i~~~gg~~~p~~~~~~~l~~ll~~ik~-~---g~---~i~~t~G~l~~e~l~~L~~aGvd~ 172 (369)
T 1r30_A 102 EQVLESARKAKAAGS--TRFCMGAAWKNPHERDMPYLEQMVQGVKA-M---GL---EACMTLGTLSESQAQRLANAGLDY 172 (369)
T ss_dssp HHHHHHHHHHHHTTC--SEEEEEECCSSCCTTTHHHHHHHHHHHHH-T---TS---EEEEECSSCCHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHHcCC--cEEEEEeCCCCCCcCCHHHHHHHHHHHHH-c---CC---eEEEecCCCCHHHHHHHHHCCCCE
Confidence 445566666666663 4566632 2 121223445566665544 2 22 3445655 7999999999999544
Q ss_pred eEEeecC
Q 026886 82 DAFGIGT 88 (231)
Q Consensus 82 d~fGVGT 88 (231)
-.+|+.|
T Consensus 173 v~i~les 179 (369)
T 1r30_A 173 YNHNLDT 179 (369)
T ss_dssp EECCCBS
T ss_pred EeecCcC
Confidence 4445554
No 143
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=33.25 E-value=1.2e+02 Score=24.16 Aligned_cols=76 Identities=13% Similarity=0.197 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhcCCCccEEE-eCCC--ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCce
Q 026886 6 PNFCAVALALNDLGYKAVGIR-LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVR-lDSG--Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~i 81 (231)
.+.+++++++.+.|....-|+ .|.. ........++++-++ . ++.|++++++. .+.+.++.+.| .
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~----~------~ipvi~~g~i~~~~~~~~~~~~G--a 100 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA----V------SIPVLVGGGVRSLEDATTLFRAG--A 100 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH----C------SSCEEEESSCCSHHHHHHHHHHT--C
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh----c------CCCEEEECCCCCHHHHHHHHHcC--C
Confidence 467889999999887755554 2221 111222222222222 2 35677887765 67788888888 6
Q ss_pred eEEeecCccccc
Q 026886 82 DAFGIGTYLVTC 93 (231)
Q Consensus 82 d~fGVGT~Lvt~ 93 (231)
|...+|+.+...
T Consensus 101 d~V~i~~~~~~~ 112 (253)
T 1h5y_A 101 DKVSVNTAAVRN 112 (253)
T ss_dssp SEEEESHHHHHC
T ss_pred CEEEEChHHhhC
Confidence 888888887653
No 144
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=32.83 E-value=66 Score=29.65 Aligned_cols=43 Identities=19% Similarity=0.359 Sum_probs=28.3
Q ss_pred ccEEEeCCC-ChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC-CHHHHHHHHhcCCc
Q 026886 22 AVGIRLDSG-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDALNKQGHE 80 (231)
Q Consensus 22 ~~GVRlDSG-Dl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L-de~~I~~L~~~ga~ 80 (231)
++|+|+|-| +....+ .+- .+++|.+--+- +++.+.+|.++++.
T Consensus 93 i~glRLD~Gf~~~eia-----~ls-----------~nlkIeLNASti~~~~l~~l~~~~~n 137 (372)
T 2p0o_A 93 VTGLRMDYGITIEQMA-----HAS-----------HKIDIGLNASTITLEEVAELKAHQAD 137 (372)
T ss_dssp CCEEEECSSCCHHHHH-----HHH-----------TTSEEEEETTTCCHHHHHHHHHTTCC
T ss_pred CCEEEEcCCCCHHHHH-----HHh-----------cCCEEEEECccCCHHHHHHHHHcCCC
Confidence 679999999 322222 221 12577776555 89999999888764
No 145
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=32.41 E-value=31 Score=28.59 Aligned_cols=72 Identities=18% Similarity=0.127 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCccEEEe-CC-----CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCC
Q 026886 7 NFCAVALALNDLGYKAVGIRL-DS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGH 79 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRl-DS-----GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga 79 (231)
+.+.+|+++.+.|....-|+- |. |....+. .+.+++ .++.++++|++. .+.+.++.+.|
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i-------~~i~~~------~~ipvi~~Ggi~~~~~~~~~l~~G- 101 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMI-------RFVRPL------TTLPIIASGGAGKMEHFLEAFLRG- 101 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHH-------HHHGGG------CCSCEEEESCCCSHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHH-------HHHHHh------CCCCEEEeCCCCCHHHHHHHHHcC-
Confidence 578899999999977665542 21 1112222 222221 245788998885 57788888888
Q ss_pred ceeEEeecCccccc
Q 026886 80 EVDAFGIGTYLVTC 93 (231)
Q Consensus 80 ~id~fGVGT~Lvt~ 93 (231)
+|..-|||.+..+
T Consensus 102 -ad~V~ig~~~l~d 114 (247)
T 3tdn_A 102 -ADKVSINTAAVEN 114 (247)
T ss_dssp -CSEECCSHHHHHC
T ss_pred -CCeeehhhHHhhC
Confidence 7899999988764
No 146
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=31.79 E-value=1.6e+02 Score=24.98 Aligned_cols=64 Identities=13% Similarity=0.071 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCc
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE 80 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~ 80 (231)
...++.++++|.+-|.+..=|-+.|.+-....+++++.+ +++.|-+-.=+|.+..+...+.|+.
T Consensus 24 ~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~------------p~~~IGAGTVlt~~~a~~ai~AGA~ 87 (217)
T 3lab_A 24 LVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV------------PEAIVGAGTVCTADDFQKAIDAGAQ 87 (217)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC------------TTSEEEEECCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC------------CCCeEeeccccCHHHHHHHHHcCCC
Confidence 467899999999999887777677777443333333322 3345555555666666666666654
No 147
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=31.56 E-value=1.3e+02 Score=25.50 Aligned_cols=46 Identities=11% Similarity=0.311 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhc---CCceeEEeecCc
Q 026886 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQ---GHEVDAFGIGTY 89 (231)
Q Consensus 36 s~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~---ga~id~fGVGT~ 89 (231)
.+-+|+..+++ | .++.|-+|||+- .+...++.+. |+..+-|=|||+
T Consensus 171 v~lm~~~i~~~-------g-~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 171 AAAIARYIKEK-------G-YRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp HHHHHHHHHHH-------T-CCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred HHHHHHHHHHh-------C-CCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 44566666665 4 568999999998 7777878887 887677778875
No 148
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=31.39 E-value=68 Score=22.71 Aligned_cols=24 Identities=25% Similarity=0.182 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCC
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDS 29 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDS 29 (231)
|..-+++.++...+..+.+|=.|+
T Consensus 54 ~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 54 PQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp HHHHHHHHHCCCSSEEEEEEECGG
T ss_pred HHHHHHHHHcCCCCEEEEEEEccC
Confidence 334444444443466778888876
No 149
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=31.07 E-value=52 Score=29.98 Aligned_cols=71 Identities=25% Similarity=0.254 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCC--CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeE
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDA 83 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDS--GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~ 83 (231)
+...+.++++.+.|.+ -|=+|+ |....+ .+.++..++.+ +++.|++-|-.+.+.++.+.+.|+..-.
T Consensus 99 ~~~~e~~~~a~~aGvd--vI~id~a~G~~~~~----~e~I~~ir~~~-----~~~~Vi~G~V~T~e~A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 99 ENELQRAEALRDAGAD--FFCVDVAHAHAKYV----GKTLKSLRQLL-----GSRCIMAGNVATYAGADYLASCGADIIK 167 (361)
T ss_dssp HHHHHHHHHHHHTTCC--EEEEECSCCSSHHH----HHHHHHHHHHH-----TTCEEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHcCCC--EEEEeCCCCCcHhH----HHHHHHHHHhc-----CCCeEEEcCcCCHHHHHHHHHcCCCEEE
Confidence 3456677778888876 455553 554332 22222322222 3568888777899999999999965333
Q ss_pred Eeec
Q 026886 84 FGIG 87 (231)
Q Consensus 84 fGVG 87 (231)
.|+|
T Consensus 168 Vg~g 171 (361)
T 3r2g_A 168 AGIG 171 (361)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 3443
No 150
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=30.26 E-value=87 Score=25.31 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=22.0
Q ss_pred EEEEeCCC--CHH----HHHHHHhcCCceeEEeecCcc
Q 026886 59 SITASNDL--NEE----TLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 59 ~Iv~S~~L--de~----~I~~L~~~ga~id~fGVGT~L 90 (231)
-|+.++++ |+. .++.+.+.|..+...|+||.-
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~ 147 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ 147 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC-
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCC
Confidence 44555666 344 355667789999999999864
No 151
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=30.13 E-value=1.5e+02 Score=26.54 Aligned_cols=71 Identities=11% Similarity=0.074 Sum_probs=45.7
Q ss_pred HHHHHHHHhcCCCccEE------EeCCCChH-HHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCc
Q 026886 9 CAVALALNDLGYKAVGI------RLDSGDLA-YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHE 80 (231)
Q Consensus 9 i~Va~~L~~~g~~~~GV------RlDSGDl~-~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~ 80 (231)
...|+.+.+.|-....| .+|+|-.. ....++++. + + .++.|+++||+. ...+.+....|
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~---v-------~-~~ipVia~GGI~~g~D~~kalalG-- 306 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAER---V-------N-KRVPIVFDSGVRRGEHVAKALASG-- 306 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHH---H-------T-TSSCEEECSSCCSHHHHHHHHHTT--
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHH---h-------C-CCCeEEEECCCCCHHHHHHHHHcC--
Confidence 45677778888776655 35666322 222333332 2 1 357899999984 55666666788
Q ss_pred eeEEeecCcccc
Q 026886 81 VDAFGIGTYLVT 92 (231)
Q Consensus 81 id~fGVGT~Lvt 92 (231)
.|+.+||+-+..
T Consensus 307 Ad~V~iGr~~l~ 318 (368)
T 2nli_A 307 ADVVALGRPVLF 318 (368)
T ss_dssp CSEEEECHHHHH
T ss_pred CCEEEECHHHHH
Confidence 589999987754
No 152
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=30.02 E-value=75 Score=32.32 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=29.6
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
.++.|+++||+ +.+.+.++.+.| .|...|||.+..
T Consensus 786 ~~ipvi~~GGI~s~~da~~~l~~G--a~~v~vg~~~l~ 821 (1025)
T 1gte_A 786 PGFPILATGGIDSAESGLQFLHSG--ASVLQVCSAVQN 821 (1025)
T ss_dssp TTCCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHT
T ss_pred CCCCEEEecCcCCHHHHHHHHHcC--CCEEEEeecccc
Confidence 35789999999 778888888888 589999998875
No 153
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=29.93 E-value=34 Score=28.79 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=30.8
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
+..|.+-||++.+.+.++.+.| .|.+=+|+.+...
T Consensus 169 ~~~I~VdGGI~~~t~~~~~~aG--Ad~~VvGsaIf~a 203 (228)
T 3ovp_A 169 SLDIEVDGGVGPDTVHKCAEAG--ANMIVSGSAIMRS 203 (228)
T ss_dssp TCEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTC
T ss_pred CCCEEEeCCcCHHHHHHHHHcC--CCEEEEeHHHhCC
Confidence 5689999999999999999999 5788889888764
No 154
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=28.64 E-value=59 Score=28.24 Aligned_cols=48 Identities=21% Similarity=0.225 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCC------------HHHHHHHHhcCCceeEEeecCcccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLN------------EETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld------------e~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.+|+.|++ -.++++++. |+.| .+.++.|.++|.+||+.|+=+|+..
T Consensus 153 i~~af~~Ar~-----~dP~a~L~~-Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~ 212 (303)
T 1i1w_A 153 IPIAFQTARA-----ADPNAKLYI-NDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSA 212 (303)
T ss_dssp HHHHHHHHHH-----HCTTSEEEE-EESSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECT
T ss_pred HHHHHHHHHH-----HCCCCeEEe-ccccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCC
Confidence 5667776655 235767664 4333 2356677889999999999888754
No 155
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=28.50 E-value=36 Score=27.94 Aligned_cols=35 Identities=20% Similarity=0.064 Sum_probs=29.9
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||+. .+.+.++.+.| +|++=||+.+...
T Consensus 195 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vGsal~~~ 230 (253)
T 1thf_D 195 TLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFR 230 (253)
T ss_dssp CSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--ChHHHHHHHHHcC
Confidence 56899999999 59999998877 6888999998764
No 156
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=27.61 E-value=2.4e+02 Score=22.92 Aligned_cols=68 Identities=21% Similarity=0.108 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHH--------------HHHHHHHhhCCCCCCCeEEEEeCCCCHHHH
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARK--------------FFRTIEKEFGVPDFEKMSITASNDLNEETL 71 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~--------------~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I 71 (231)
..++.++++|.+.|.++.-+|.-+.+-....+++|+ .+|.+. +. .+..+.|++.|.+.+
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~-~~------GAd~v~~~~~d~~v~ 97 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAAL-EA------GAAFLVSPGLLEEVA 97 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHH-HH------TCSEEEESSCCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHH-Hc------CCCEEEcCCCCHHHH
Confidence 457889999989999999999887654333333332 011110 01 124556777887777
Q ss_pred HHHHhcCCc
Q 026886 72 DALNKQGHE 80 (231)
Q Consensus 72 ~~L~~~ga~ 80 (231)
+..++.|.+
T Consensus 98 ~~~~~~g~~ 106 (207)
T 2yw3_A 98 ALAQARGVP 106 (207)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHhCCC
Confidence 777776643
No 157
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=27.56 E-value=85 Score=21.63 Aligned_cols=54 Identities=7% Similarity=-0.057 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHhcCCCc--------cEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCC
Q 026886 5 VPNFCAVALALNDLGYKA--------VGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASND 65 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~--------~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~ 65 (231)
-.||-++...|...|+.. +=||+=.=.=..-+.++++.|.+. |++...|..|||
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~-------g~~~~iv~~~~g 81 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMA-------GHTNCIRLAAGG 81 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHH-------CCSCCBCCCCCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHc-------CCCcEEEeCCCC
Confidence 468888888888888653 234432211123355566666665 666666666664
No 158
>3gaa_A Uncharacterized protein TA1441; the protein with unknown function from thermoplasma acidophi structural genomics,PSI, MCSG; 2.70A {Thermoplasma acidophilum}
Probab=26.89 E-value=39 Score=28.90 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=24.2
Q ss_pred ccEEEeCCCChHHHHHHHHHHHHHHHH
Q 026886 22 AVGIRLDSGDLAYLSCEARKFFRTIEK 48 (231)
Q Consensus 22 ~~GVRlDSGDl~~ls~~~R~~ld~~~~ 48 (231)
+.|+.+|.++|...++++++.+++..+
T Consensus 209 ~~gl~i~~~~L~e~Ae~~e~~i~~l~e 235 (252)
T 3gaa_A 209 AYNLKIKTDLLEEQVKALDEQIKKIEE 235 (252)
T ss_dssp HHCCCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 569999999999999999999998755
No 159
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=26.36 E-value=2.4e+02 Score=25.38 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=27.6
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCccc
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLV 91 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lv 91 (231)
++.|+++||+. .+.+.++.+.| .|...|||.+.
T Consensus 298 ~ipvI~~GGI~s~~da~~~l~~G--Ad~V~vgra~l 331 (367)
T 3zwt_A 298 RVPIIGVGGVSSGQDALEKIRAG--ASLVQLYTALT 331 (367)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCEEEECHHHH
Confidence 67999999984 77778877788 58999999885
No 160
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=26.34 E-value=1.4e+02 Score=26.02 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=27.1
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCcccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.|+++||+ +.+.+.+....| .|+.+||+-+..
T Consensus 256 ~ipvia~GGI~~~~d~~kal~~G--Ad~V~igr~~l~ 290 (332)
T 1vcf_A 256 HLPLVASGGVYTGTDGAKALALG--ADLLAVARPLLR 290 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEECGGGHH
T ss_pred CCeEEEECCCCCHHHHHHHHHhC--CChHhhhHHHHH
Confidence 5789999998 566677766778 589999998764
No 161
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=26.16 E-value=1.5e+02 Score=23.56 Aligned_cols=51 Identities=6% Similarity=0.019 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC
Q 026886 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL 66 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L 66 (231)
|+-.++..|.+.|+......+=.=|...+...+++++++ +-.+ -|+.|||+
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~--------~~~D-lVittGG~ 79 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIAS--------DDVQ-VVLITGGT 79 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHS--------SSCC-EEEEESCC
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhc--------CCCC-EEEeCCCC
Confidence 555667777777776554444333555555555555442 1123 56667765
No 162
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=26.00 E-value=49 Score=31.67 Aligned_cols=39 Identities=8% Similarity=0.143 Sum_probs=32.5
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcC------CceeEEeecCcccccC
Q 026886 56 EKMSITASNDLNEETLDALNKQG------HEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~Iv~S~~Lde~~I~~L~~~g------a~id~fGVGT~Lvt~~ 94 (231)
.++.+++-||++.+.+.++.+++ +-.|++.|++.+..+.
T Consensus 172 ~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~ 216 (540)
T 3nl6_A 172 HWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASL 216 (540)
T ss_dssp TTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCT
T ss_pred CCCCEEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhcCC
Confidence 56799999999999999999732 3489999999998653
No 163
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=25.96 E-value=1.5e+02 Score=29.84 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=45.3
Q ss_pred HhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccc
Q 026886 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 16 ~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
.+.+-.+.|+=.=.+.-..+.+++.+.|+++ |..+++|++-|-.=......+.+.|+. ..|+.||++..
T Consensus 652 ~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~-------G~~dv~VivGG~~P~~d~~~l~~~GaD-~~f~pgtd~~e 720 (762)
T 2xij_A 652 VDADVHAVGVSTLAAGHKTLVPELIKELNSL-------GRPDILVMCGGVIPPQDYEFLFEVGVS-NVFGPGTRIPK 720 (762)
T ss_dssp HHTTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHHTCC-EEECTTCCHHH
T ss_pred HHcCCCEEEEeeecHHHHHHHHHHHHHHHhc-------CCCCCEEEEeCCCCcccHHHHHhCCCC-EEeCCCCCHHH
Confidence 3446667777543344466678888888887 887888888773323234556777742 35788987754
No 164
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.93 E-value=3.5e+02 Score=23.98 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=32.2
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccCCCC
Q 026886 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~~~p 97 (231)
++.|+++||+. -..|......| .|+.+|||.+..+...|
T Consensus 223 ~ipvIa~GGI~~g~di~kAlalG--A~~V~vG~~fl~~~Es~ 262 (351)
T 2c6q_A 223 KGHIISDGGCSCPGDVAKAFGAG--ADFVMLGGMLAGHSESG 262 (351)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSC
T ss_pred CCcEEEeCCCCCHHHHHHHHHcC--CCceeccHHHhcCccCc
Confidence 47899999986 88888888889 57999999998865544
No 165
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=25.16 E-value=1.7e+02 Score=26.06 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=30.5
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCceeEEeecCccccc
Q 026886 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.|++.||+ +.+.++++.+.| .|...|||.++..
T Consensus 227 ~iPV~vGGGIrs~Eda~~ll~aG--AD~VVVGSAav~d 262 (286)
T 3vk5_A 227 DQVLFVSGNVRSGRQVTEYLDSG--ADYVGFAGALEQP 262 (286)
T ss_dssp TCEEEEESSCCSHHHHHHHHHTT--CSEEEESGGGSST
T ss_pred CCCEEEEeCCCCHHHHHHHHHcC--CCEEEECchhhcC
Confidence 5789999998 678888899988 7899999999875
No 166
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=25.01 E-value=71 Score=27.87 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCC------------HHHHHHHHhcCCceeEEeecCccccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLN------------EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld------------e~~I~~L~~~ga~id~fGVGT~Lvt~ 93 (231)
++.+|+.|++. -++++++. |+.+ .+.++.|.++|.+||++|+=.|+.+.
T Consensus 152 i~~af~~Ar~~-----dP~a~L~~-Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~ 212 (303)
T 1ta3_B 152 VRIAFETARAA-----DPDAKLYI-NDYNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSS 212 (303)
T ss_dssp HHHHHHHHHHH-----CTTSEEEE-EESCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTT
T ss_pred HHHHHHHHHHH-----CCCCEEEe-ccccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCC
Confidence 56777777652 25656554 4443 23456678899999999998887654
No 167
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=24.86 E-value=1.6e+02 Score=23.93 Aligned_cols=63 Identities=16% Similarity=-0.016 Sum_probs=37.4
Q ss_pred HHHhcCCCccEEEeCC-CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC--HHHHHHHHhcCCceeEEe
Q 026886 14 ALNDLGYKAVGIRLDS-GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 14 ~L~~~g~~~~GVRlDS-GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld--e~~I~~L~~~ga~id~fG 85 (231)
++++.|+.+.=...++ +|.......++.++.. + -+.-|+.+.+.+ ...+..+.+.|.|+-.++
T Consensus 28 ~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~--------~-vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 28 AAEELKVDLQILAPPGANDVPKQVQFIESALAT--------Y-PSGIATTIPSDTAFSKSLQRANKLNIPVIAVD 93 (297)
T ss_dssp HHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT--------C-CSEEEECCCCSSTTHHHHHHHHHHTCCEEEES
T ss_pred HHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc--------C-CCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 3556687765333333 4776666555555543 2 233455555555 778888888887765543
No 168
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=24.80 E-value=1.8e+02 Score=27.00 Aligned_cols=40 Identities=10% Similarity=0.182 Sum_probs=29.9
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccCCCC
Q 026886 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 56 ~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~~~p 97 (231)
.++.|+++||+- -..|....+.| .|+.++||.++.+...|
T Consensus 351 ~~ipvia~GGi~~~~di~kAlalG--A~~V~iG~~~~~~~E~~ 391 (503)
T 1me8_A 351 IYIPVCSDGGIVYDYHMTLALAMG--ADFIMLGRYFARFEESP 391 (503)
T ss_dssp EECCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSS
T ss_pred CCceEEEeCCCCCHHHHHHHHHcC--CCEEEECchhhccccCC
Confidence 357899998874 66667777778 47899999998765444
No 169
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=24.78 E-value=1.5e+02 Score=21.69 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=30.5
Q ss_pred cEEEeCCCC-hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHH
Q 026886 23 VGIRLDSGD-LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEET 70 (231)
Q Consensus 23 ~GVRlDSGD-l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~ 70 (231)
.-||..+|. |..--+++-+.|..+ |..+++|..|..-||+.
T Consensus 21 idirvstgkeleralqelekalara-------garnvqitisaendeqa 62 (96)
T 2jvf_A 21 IDIRVSTGKELERALQELEKALARA-------GARNVQITISAENDEQA 62 (96)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHHH-------TCSEEEEEEECSSHHHH
T ss_pred EEEEEcccHHHHHHHHHHHHHHHhc-------cccceEEEEEecChHHH
Confidence 368888885 344445566777776 88999999999888764
No 170
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=24.75 E-value=1.2e+02 Score=27.56 Aligned_cols=67 Identities=16% Similarity=0.386 Sum_probs=45.9
Q ss_pred CccEEEeCCCChHHHH-HHHHHHHHHHHHhhCCCCCCCeEEEEe-CCCCHHHHHHHHhcCCceeEEeec
Q 026886 21 KAVGIRLDSGDLAYLS-CEARKFFRTIEKEFGVPDFEKMSITAS-NDLNEETLDALNKQGHEVDAFGIG 87 (231)
Q Consensus 21 ~~~GVRlDSGDl~~ls-~~~R~~ld~~~~~l~i~g~~~v~Iv~S-~~Lde~~I~~L~~~ga~id~fGVG 87 (231)
.+..|-+-.|.+..+. ..+.++++.+.+.|++++...+.|-+. +.+|++.+..|.+.|...-++||=
T Consensus 104 ~i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQ 172 (457)
T 1olt_A 104 HVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172 (457)
T ss_dssp CEEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEE
T ss_pred ceEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeec
Confidence 3567777778877654 457888888877676543334455443 558999999999998655555553
No 171
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=24.52 E-value=2.3e+02 Score=25.12 Aligned_cols=80 Identities=23% Similarity=0.187 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHhcCC--CccEEEeCCCCh-------HHH---HHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHH
Q 026886 5 VPNFCAVALALNDLGY--KAVGIRLDSGDL-------AYL---SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLD 72 (231)
Q Consensus 5 vpnai~Va~~L~~~g~--~~~GVRlDSGDl-------~~l---s~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~ 72 (231)
-..++++|+.|++.|. ...+|.--|=|- .+. -.+--++|.++++++|++ ++|.-+|++.+.
T Consensus 54 ~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLp-------v~Tev~D~~~v~ 126 (298)
T 3fs2_A 54 RDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFP-------VLTDIHTEEQCA 126 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCC-------EEEECCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCe-------EEEEeCCHHHHH
Confidence 4567888988887542 234555543331 111 123345677777788887 456689999999
Q ss_pred HHHhcCCceeEEeecCcccccC
Q 026886 73 ALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 73 ~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
.+.+. +|.+=||+...+..
T Consensus 127 ~l~~~---vd~lkIgA~~~~n~ 145 (298)
T 3fs2_A 127 AVAPV---VDVLQIPAFLCRQT 145 (298)
T ss_dssp HHTTT---CSEEEECGGGTTCH
T ss_pred HHHhh---CCEEEECccccCCH
Confidence 99775 89999999887753
No 172
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=24.42 E-value=1.6e+02 Score=23.84 Aligned_cols=61 Identities=16% Similarity=0.126 Sum_probs=37.5
Q ss_pred HHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC--HHHHHHHHhcCCceeEEe
Q 026886 14 ALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 14 ~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld--e~~I~~L~~~ga~id~fG 85 (231)
++++.|+.+ +-.++.|.......++.++.. + -+.-|+.+.+.+ ...+..+.+.|.|+-.++
T Consensus 27 ~a~~~g~~~--~~~~~~~~~~~~~~i~~l~~~--------~-vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 27 AGKDLGFEV--IKIAVPDGEKTLNAIDSLAAS--------G-AKGFVICTPDPKLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHTEEE--EEEECCSHHHHHHHHHHHHHT--------T-CCEEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHcCCEE--EEeCCCCHHHHHHHHHHHHHc--------C-CCEEEEeCCCchhhHHHHHHHHHCCCcEEEeC
Confidence 355668776 456788877666666655543 3 233555554443 345788888888865554
No 173
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=24.28 E-value=2e+02 Score=20.59 Aligned_cols=26 Identities=8% Similarity=0.196 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCC
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGD 31 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGD 31 (231)
|..-+++.++...|..+.+|-.|..+
T Consensus 48 ~~l~~l~~~~~~~~~~vv~v~~~~~~ 73 (153)
T 2l5o_A 48 PKIIKTANDYKNKNFQVLAVAQPIDP 73 (153)
T ss_dssp HHHHHHHHHGGGTTEEEEEEECTTSC
T ss_pred HHHHHHHHHhccCCeEEEEEecCCCC
Confidence 44445566666667778888877655
No 174
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=24.16 E-value=2.4e+02 Score=22.78 Aligned_cols=61 Identities=7% Similarity=0.082 Sum_probs=34.6
Q ss_pred HHHhcCCCccEEEeCC-CChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEe
Q 026886 14 ALNDLGYKAVGIRLDS-GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 14 ~L~~~g~~~~GVRlDS-GDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fG 85 (231)
++++.|+.+. + .++ +|.......++.+.. -+++| -|+.+.+.+...+..+.+.|.|+-.++
T Consensus 41 ~a~~~g~~~~-~-~~~~~~~~~~~~~~~~l~~-----~~vdg----iIi~~~~~~~~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 41 IATMYKYNII-L-SNSDQNMEKELHLLNTMLG-----KQVDG----IVFMGGNITDEHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp HHHHTTCEEE-E-EECTTCHHHHHHHHHHHHH-----TTCSE----EEECCSCCCHHHHHHHHHSSSCEEEES
T ss_pred HHHHcCCEEE-E-EeCCCCHHHHHHHHHHHHh-----CCCCE----EEEecCCCCHHHHHHHHhcCCCEEEEc
Confidence 4567788753 2 244 455444433443332 23332 455555677788888888887765543
No 175
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=23.85 E-value=1.1e+02 Score=28.11 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCCC-------hHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhc
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSGD-------LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSGD-------l~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ 77 (231)
...|.++|+++.+.|.. .||..+=+ ...+..+--++|.++++++|++ ++|.=+|++.+..+.+.
T Consensus 155 ~e~a~~~a~~~k~aGa~--~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~-------~~te~~d~~~~~~l~~~ 225 (385)
T 3nvt_A 155 YEQVAAVAESIKAKGLK--LIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLG-------VISEIVTPADIEVALDY 225 (385)
T ss_dssp HHHHHHHHHHHHHTTCC--EEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCE-------EEEECCSGGGHHHHTTT
T ss_pred HHHHHHHHHHHHHcCCC--eEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCE-------EEEecCCHHHHHHHHhh
Confidence 56789999999998854 55554311 0012234345666777778765 56678999999999775
Q ss_pred CCceeEEeecCcccccC
Q 026886 78 GHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 78 ga~id~fGVGT~Lvt~~ 94 (231)
+|.+=||+..++++
T Consensus 226 ---vd~lkIgs~~~~n~ 239 (385)
T 3nvt_A 226 ---VDVIQIGARNMQNF 239 (385)
T ss_dssp ---CSEEEECGGGTTCH
T ss_pred ---CCEEEECcccccCH
Confidence 89999999998863
No 176
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=23.85 E-value=2.8e+02 Score=22.08 Aligned_cols=26 Identities=8% Similarity=0.155 Sum_probs=16.0
Q ss_pred EEEEeCCCCHHHHHHHHh-cCCceeEE
Q 026886 59 SITASNDLNEETLDALNK-QGHEVDAF 84 (231)
Q Consensus 59 ~Iv~S~~Lde~~I~~L~~-~ga~id~f 84 (231)
-|+.+.+.+...+..+.+ .|.|+-.+
T Consensus 81 ii~~~~~~~~~~~~~l~~~~~iPvV~~ 107 (296)
T 3brq_A 81 IMIYPRFLSVDEIDDIIDAHSQPIMVL 107 (296)
T ss_dssp EEEECSSSCHHHHHHHHHTCSSCEEEE
T ss_pred EEEecCCCChHHHHHHHhcCCCCEEEE
Confidence 455555566666777776 67665443
No 177
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=23.72 E-value=1.5e+02 Score=27.95 Aligned_cols=76 Identities=12% Similarity=0.178 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCCCccEE------EeCCCCh-HHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCc
Q 026886 9 CAVALALNDLGYKAVGI------RLDSGDL-AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHE 80 (231)
Q Consensus 9 i~Va~~L~~~g~~~~GV------RlDSGDl-~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-e~~I~~L~~~ga~ 80 (231)
...|+.+.+.|-...-| .+|++-. ..+..++++.+.+. ++ ..++.|+++||+. -..+.+....|
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~----~~--~~~ipVia~GGI~~g~Dv~kaLalG-- 425 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQR----NL--KDKLEVFVDGGVRRGTDVLKALCLG-- 425 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTT----TC--BTTBEEEEESSCCSHHHHHHHHHHT--
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhh----cc--CCCcEEEEECCCCCHHHHHHHHHcC--
Confidence 45577777777543333 3455432 22333444444331 11 2468999999985 45566666678
Q ss_pred eeEEeecCcccc
Q 026886 81 VDAFGIGTYLVT 92 (231)
Q Consensus 81 id~fGVGT~Lvt 92 (231)
.|+.+||+-+.-
T Consensus 426 AdaV~iGr~~l~ 437 (511)
T 1kbi_A 426 AKGVGLGRPFLY 437 (511)
T ss_dssp CSEEEECHHHHH
T ss_pred CCEEEECHHHHH
Confidence 589999997764
No 178
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=23.49 E-value=2e+02 Score=26.38 Aligned_cols=70 Identities=21% Similarity=0.284 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEe
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fG 85 (231)
+.+.+.+.+|.+.|....-+=...|++..+- +.+++.++.+ +++.|++-+..+.+.+..+.+.|+ |.+-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~----e~i~~i~~~~-----p~~pvi~g~~~t~e~a~~l~~~G~--d~I~ 304 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHSRRVI----ETLEMIKADY-----PDLPVVAGNVATPEGTEALIKAGA--DAVK 304 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSHHHH----HHHHHHHHHC-----TTSCEEEEEECSHHHHHHHHHTTC--SEEE
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCchHHHH----HHHHHHHHHC-----CCceEEeCCcCCHHHHHHHHHcCC--CEEE
Confidence 3456667777777765444433345543332 2333333323 245677788999999999999995 4444
Q ss_pred e
Q 026886 86 I 86 (231)
Q Consensus 86 V 86 (231)
|
T Consensus 305 v 305 (494)
T 1vrd_A 305 V 305 (494)
T ss_dssp E
T ss_pred E
Confidence 4
No 179
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=23.41 E-value=2.3e+02 Score=26.29 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEe
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fG 85 (231)
++..+.+++|.+.|.. .|=+|+.... +..+.+.+++.++++ +++.|++.|-.+.+.++.+.+.|+..-..|
T Consensus 228 ~~~~~~a~~l~~aG~d--~I~id~a~g~--~~~~~~~v~~i~~~~-----p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVD--VVVVDTAHGH--SKGVIERVRWVKQTF-----PDVQVIGGNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCS--EEEEECSCCS--BHHHHHHHHHHHHHC-----TTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred cchHHHHHHHhhcccc--eEEecccCCc--chhHHHHHHHHHHHC-----CCceEEEeeeCcHHHHHHHHHcCCCEEEEC
Confidence 3567778888887744 5666654321 222223333333322 456888988899999999999996533333
Q ss_pred e--cCcccc----cCCCCcceeEEEEeE
Q 026886 86 I--GTYLVT----CYAQAALGCVFKLVE 107 (231)
Q Consensus 86 V--GT~Lvt----~~~~p~l~~VyKLve 107 (231)
+ |++..| ..+.|.+..++.+++
T Consensus 299 ~g~Gs~~~t~~~~g~g~p~~~~l~~v~~ 326 (490)
T 4avf_A 299 IGPGSICTTRIVAGVGVPQISAIANVAA 326 (490)
T ss_dssp SSCSTTCHHHHHTCBCCCHHHHHHHHHH
T ss_pred CCCCcCCCccccCCCCccHHHHHHHHHH
Confidence 2 233322 233566665555554
No 180
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=23.21 E-value=1.6e+02 Score=29.41 Aligned_cols=69 Identities=22% Similarity=0.273 Sum_probs=44.9
Q ss_pred HhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCcccc
Q 026886 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 16 ~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
.+.+-++.|+=.=.+.-..+.+++.+.|+++ |..+++|++-|-.=.+....+.+.|+. ..|+.||.+..
T Consensus 644 ~e~~adiVglSsl~~~~~~~~~~vi~~L~~~-------G~~~i~VivGG~~p~~d~~~l~~~GaD-~~f~~gt~~~e 712 (727)
T 1req_A 644 VEADVHVVGVSSLAGGHLTLVPALRKELDKL-------GRPDILITVGGVIPEQDFDELRKDGAV-EIYTPGTVIPE 712 (727)
T ss_dssp HHTTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHTTEE-EEECTTCCHHH
T ss_pred HHcCCCEEEEeeecHhHHHHHHHHHHHHHhc-------CCCCCEEEEcCCCccccHHHHHhCCCC-EEEcCCccHHH
Confidence 3446667777544444456678888888887 777888888874433344556777732 35777887654
No 181
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=22.88 E-value=2.1e+02 Score=20.65 Aligned_cols=24 Identities=25% Similarity=0.438 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCC
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDS 29 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDS 29 (231)
|..-+++.++.+.|..+.+|=.|.
T Consensus 49 ~~l~~l~~~~~~~~~~vv~v~~d~ 72 (152)
T 2lrn_A 49 PYLLKTYNAFKDKGFTIYGVSTDR 72 (152)
T ss_dssp HHHHHHHHHHTTTTEEEEEEECCS
T ss_pred HHHHHHHHHhccCCeEEEEEEccC
Confidence 444555556665567778887774
No 182
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=22.26 E-value=2.1e+02 Score=24.32 Aligned_cols=72 Identities=18% Similarity=0.245 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHH-------HHHHHHhc
Q 026886 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEE-------TLDALNKQ 77 (231)
Q Consensus 5 vpnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~-------~I~~L~~~ 77 (231)
+..++++|.++ |-.+.++=. +|+ -..++++-+.. +.+.|++|||+..+ .+....+.
T Consensus 161 i~~a~~~a~~~---GAD~vkt~~-~~~----~e~~~~~~~~~---------~~~pV~asGGi~~~~~~~~l~~i~~~~~a 223 (263)
T 1w8s_A 161 VAYAARIALEL---GADAMKIKY-TGD----PKTFSWAVKVA---------GKVPVLMSGGPKTKTEEDFLKQVEGVLEA 223 (263)
T ss_dssp HHHHHHHHHHH---TCSEEEEEC-CSS----HHHHHHHHHHT---------TTSCEEEECCSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHc---CCCEEEEcC-CCC----HHHHHHHHHhC---------CCCeEEEEeCCCCCCHHHHHHHHHHHHHc
Q ss_pred CCceeEEeecCcccccCC
Q 026886 78 GHEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 78 ga~id~fGVGT~Lvt~~~ 95 (231)
|+. +.-+|.++....+
T Consensus 224 GA~--GvsvgraI~~~~d 239 (263)
T 1w8s_A 224 GAL--GIAVGRNVWQRRD 239 (263)
T ss_dssp TCC--EEEESHHHHTSTT
T ss_pred CCe--EEEEehhhcCCcC
No 183
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.01 E-value=1.5e+02 Score=23.38 Aligned_cols=51 Identities=8% Similarity=0.009 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCC
Q 026886 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL 66 (231)
Q Consensus 7 nai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~L 66 (231)
|+-.++..|++.|+......+=.=|...+...+++++++ .-.+ -|+.|||+
T Consensus 32 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~--------~~~D-lVittGG~ 82 (169)
T 1y5e_A 32 SGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHK--------EDVD-VVLTNGGT 82 (169)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTC--------TTCS-EEEEECCC
T ss_pred hHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhc--------CCCC-EEEEcCCC
Confidence 455566667777776554444333544444444444431 0123 56667765
No 184
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=21.90 E-value=2.4e+02 Score=23.84 Aligned_cols=17 Identities=18% Similarity=0.438 Sum_probs=9.8
Q ss_pred hhhHHHHHhhhcCCcce
Q 026886 198 VFGDVQFLSTLNGPFIS 214 (231)
Q Consensus 198 ~~s~r~~~~~~~~~~~~ 214 (231)
+-+...||......|+.
T Consensus 225 iA~~v~fLaSd~a~~iT 241 (254)
T 4fn4_A 225 IANVIVFLASDEASFVN 241 (254)
T ss_dssp HHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHhCchhcCCc
Confidence 34445577666666655
No 185
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=21.67 E-value=43 Score=26.01 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=26.1
Q ss_pred CCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEeecCc
Q 026886 53 PDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 53 ~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fGVGT~ 89 (231)
++.+++-|++|+|-.-+......+.|..+-++|||..
T Consensus 101 ~~~~~~iillTDG~~~~~~~~~~~~~i~i~~igvG~~ 137 (179)
T 1mjn_A 101 PDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKH 137 (179)
T ss_dssp TTSEEEEEEEESSCCSSCSCCGGGTTSEEEEEEESGG
T ss_pred CCCCeEEEEEcCCCCCCCcchHHHCCCEEEEEEcccc
Confidence 4566788999998754333334567888888999975
No 186
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=21.54 E-value=3.1e+02 Score=22.08 Aligned_cols=63 Identities=11% Similarity=-0.015 Sum_probs=35.5
Q ss_pred HHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCC--HHHHHHHHhcCCceeEEe
Q 026886 14 ALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 14 ~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld--e~~I~~L~~~ga~id~fG 85 (231)
++++.|+.+.=+-...+|.......++.++.. +++ .-|+.+.+.+ ...+..+.+.|.|+-.++
T Consensus 29 ~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~-----~vd----giIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 29 AAQALNVTVEYRGAAQYDIQEQITVLEQAIAK-----NPA----GIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHTCEEEEEECSSSCHHHHHHHHHHHHHH-----CCS----EEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHh-----CCC----EEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 35566877642233345765555555555443 233 2455444443 577888888887765543
No 187
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=21.39 E-value=1e+02 Score=26.20 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=31.0
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCceeEEeecCcccccC
Q 026886 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~Iv~S~~Ld-e~~I~~L~~~ga~id~fGVGT~Lvt~~ 94 (231)
.++.|++-+|+. .+.+.++.+.| .|++-|||.++...
T Consensus 177 ~~iPviv~gGI~t~eda~~~~~~G--AdgViVGSAi~~a~ 214 (264)
T 1xm3_A 177 AKVPVIVDAGIGSPKDAAYAMELG--ADGVLLNTAVSGAD 214 (264)
T ss_dssp CSSCBEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 356889999995 89999999988 68999999998753
No 188
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=21.33 E-value=80 Score=27.39 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=29.4
Q ss_pred CeEEEEeCCC-CHHHHHHHHh-cCCceeEEeecCccccc
Q 026886 57 KMSITASNDL-NEETLDALNK-QGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~Iv~S~~L-de~~I~~L~~-~ga~id~fGVGT~Lvt~ 93 (231)
++.|+++||+ +.+.+.++.+ .| .|...||+.+..+
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~~g--ad~V~iGR~~l~~ 219 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEESG--CDGLLVARGAIGR 219 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHHC--CSEEEESGGGTTC
T ss_pred CCeEEEECCcCCHHHHHHHHHcCC--CCEEEECHHHHhC
Confidence 5789999998 8888888887 46 6899999988774
No 189
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=21.10 E-value=1.3e+02 Score=25.41 Aligned_cols=37 Identities=3% Similarity=-0.033 Sum_probs=28.5
Q ss_pred CCeEEEEeCCCCHHHHHHH-HhcCCceeEEeecCcccccC
Q 026886 56 EKMSITASNDLNEETLDAL-NKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~Iv~S~~Lde~~I~~L-~~~ga~id~fGVGT~Lvt~~ 94 (231)
.++.|+.-++++.....++ .+.| +|+|-||+.+....
T Consensus 175 ~~~~ilyggsV~~~n~~~~~~~~~--vDG~LVG~a~l~a~ 212 (225)
T 1hg3_A 175 PEVKVLCGAGISTGEDVKKAIELG--TVGVLLASGVTKAK 212 (225)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTCS
T ss_pred CCCEEEEeCCCCcHHHHHHHHhCC--CCEEEeCHHHHCCc
Confidence 5679999999996655555 4445 89999999988753
No 190
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=21.00 E-value=2.4e+02 Score=22.91 Aligned_cols=63 Identities=19% Similarity=0.116 Sum_probs=35.0
Q ss_pred HHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCceeEEe
Q 026886 13 LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 13 ~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L~~~ga~id~fG 85 (231)
.++.+.||.+ +-.++.+-...-.++.+.+.+ .+++| -|+++...+.+.+..+.+.|.|+-.++
T Consensus 36 ~~a~~~g~~~--~~~~~~~~~~~~~~~~~~l~~----~~vdG----iI~~~~~~~~~~~~~l~~~~iPvV~i~ 98 (295)
T 3hcw_A 36 ETCNQHGYGT--QTTVSNNMNDLMDEVYKMIKQ----RMVDA----FILLYSKENDPIKQMLIDESMPFIVIG 98 (295)
T ss_dssp HHHHTTTCEE--EECCCCSHHHHHHHHHHHHHT----TCCSE----EEESCCCTTCHHHHHHHHTTCCEEEES
T ss_pred HHHHHCCCEE--EEEcCCCChHHHHHHHHHHHh----CCcCE----EEEcCcccChHHHHHHHhCCCCEEEEC
Confidence 3456678765 334555433333333344433 23332 555555566677888888887765543
No 191
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=20.89 E-value=2.4e+02 Score=20.23 Aligned_cols=66 Identities=9% Similarity=0.257 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHH--------------HHHHhhCCCCCCCeEEE---------E
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFR--------------TIEKEFGVPDFEKMSIT---------A 62 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld--------------~~~~~l~i~g~~~v~Iv---------~ 62 (231)
|..-+++.++...+..+.+|-.|... ..+++.++ +....|++.+.+.+-|+ .
T Consensus 46 ~~l~~~~~~~~~~~v~vv~v~~d~~~-----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 120 (151)
T 2f9s_A 46 PYMANQYKHFKSQGVEIVAVNVGESK-----IAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 120 (151)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCCH-----HHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEECCCCH-----HHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEE
Confidence 44455566666667788888887532 22333333 23344677666653332 3
Q ss_pred eCCCCHHHHHHHHh
Q 026886 63 SNDLNEETLDALNK 76 (231)
Q Consensus 63 S~~Lde~~I~~L~~ 76 (231)
+|..+.+.+.++.+
T Consensus 121 ~G~~~~~~l~~~l~ 134 (151)
T 2f9s_A 121 TGTMTESMIHDYMN 134 (151)
T ss_dssp ESCCCHHHHHHHHH
T ss_pred eCCCCHHHHHHHHH
Confidence 35556666655544
No 192
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=20.66 E-value=97 Score=27.99 Aligned_cols=35 Identities=14% Similarity=0.310 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCCCH------HHHHHHH---------hcCCceeEEeecCc
Q 026886 55 FEKMSITASNDLNE------ETLDALN---------KQGHEVDAFGIGTY 89 (231)
Q Consensus 55 ~~~v~Iv~S~~Lde------~~I~~L~---------~~ga~id~fGVGT~ 89 (231)
..++-|++|+|.+. +.+..+. +.|..+-++|||+.
T Consensus 124 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~ 173 (509)
T 2odp_A 124 IRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKL 173 (509)
T ss_dssp EEEEEEEESCSCCCSSSCTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSS
T ss_pred cceEEEEECCCCccCCCChhHHHHHHHHHhhccccccCceEEEEEEcCCC
Confidence 45778999998643 1233343 55777899999986
No 193
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.62 E-value=1.9e+02 Score=24.48 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=10.3
Q ss_pred ChhhHHHHHhhhcCCcce
Q 026886 197 MVFGDVQFLSTLNGPFIS 214 (231)
Q Consensus 197 ~~~s~r~~~~~~~~~~~~ 214 (231)
++-....||......|+.
T Consensus 224 diA~~v~fL~S~~a~~iT 241 (255)
T 4g81_D 224 ELIGTAIFLSSKASDYIN 241 (255)
T ss_dssp GGHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHhCchhCCCc
Confidence 344555577666566654
No 194
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=20.49 E-value=1e+02 Score=27.10 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=26.5
Q ss_pred ChHHHHHH----HHHHHHHHHHhhCCCCCCCeEEEEeCCCCHHHHHHH
Q 026886 31 DLAYLSCE----ARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDAL 74 (231)
Q Consensus 31 Dl~~ls~~----~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde~~I~~L 74 (231)
|+....++ +|+.+.+. |++++-|-+|||+|=-.+..|
T Consensus 25 ~~~~~i~~~v~~L~d~l~~~-------g~~~vvvglSGGiDSal~a~L 65 (285)
T 3dpi_A 25 DARDEAERRIGFVADYLRTA-------GLRACVLGISGGIDSSTAGRL 65 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-------TCCEEEEECCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHc-------CCCcEEEEccCChhHHHHHHH
Confidence 55555555 45555555 789999999999998777554
No 195
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=20.33 E-value=91 Score=26.98 Aligned_cols=48 Identities=19% Similarity=0.347 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCC-----------HHHHHHHHhcCCceeEEeecCcccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLN-----------EETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Ld-----------e~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.+++.|++. + ++++++. |+.| .+.+..|.++|.+||+.|+=+|+..
T Consensus 150 i~~af~~Ar~~---d--P~a~l~~-ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~ 208 (315)
T 3cui_A 150 IETAFRAARAA---D--PTAKLCI-NDYNVEGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIV 208 (315)
T ss_dssp HHHHHHHHHHH---C--SSSEEEE-EESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEET
T ss_pred HHHHHHHHHhh---C--CCCEEEE-CCccccCcchHHHHHHHHHHHHHHCCCcccEEEeeeecCC
Confidence 45666666542 2 5667765 4432 2345667788999999999888754
No 196
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=20.27 E-value=91 Score=26.75 Aligned_cols=48 Identities=21% Similarity=0.366 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhhCCCCCCCeEEEEeCCCCH-----------HHHHHHHhcCCceeEEeecCcccc
Q 026886 39 ARKFFRTIEKEFGVPDFEKMSITASNDLNE-----------ETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 39 ~R~~ld~~~~~l~i~g~~~v~Iv~S~~Lde-----------~~I~~L~~~ga~id~fGVGT~Lvt 92 (231)
++.+++.+++. + ++++++. |+.+. ..++.|.++|.+||+.|+=+|+..
T Consensus 151 ~~~af~~Ar~~---d--P~a~L~~-Ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~q~H~~~ 209 (302)
T 1nq6_A 151 IEEAFRTARTV---D--ADAKLCY-NDYNTDGQNAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNS 209 (302)
T ss_dssp HHHHHHHHHHH---C--TTSEEEE-EESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBT
T ss_pred HHHHHHHHHHh---C--CCCEEEe-cccccccCchHHHHHHHHHHHHHHCCCCcceEEEEEeecC
Confidence 46666666552 2 4656555 44331 345667778999999999888854
No 197
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=20.21 E-value=1.6e+02 Score=24.95 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=28.6
Q ss_pred CCeEEEEeCCCCHHHHHHH-HhcCCceeEEeecCcccccC
Q 026886 56 EKMSITASNDLNEETLDAL-NKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~Iv~S~~Lde~~I~~L-~~~ga~id~fGVGT~Lvt~~ 94 (231)
.++.|+.-++++.....++ .+.| +|+|-||+.+....
T Consensus 172 ~~~~ilyggsV~~~n~~~~~~~~g--iDG~LVG~a~l~a~ 209 (226)
T 1w0m_A 172 PEVSVITGAGIESGDDVAAALRLG--TRGVLLASAAVKAK 209 (226)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTCS
T ss_pred CCCEEEEeCCCCcHHHHHHHHhCC--CCEEEECHHHHCCc
Confidence 5689999999996655555 4445 89999999988753
No 198
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=20.07 E-value=3.1e+02 Score=21.32 Aligned_cols=61 Identities=13% Similarity=0.138 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhcCCCccEEEeCCCChHHHHHHHHHHHHHHHHhhCCCCCCCeEEE-------EeCCCCHHHHHHHHhc
Q 026886 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT-------ASNDLNEETLDALNKQ 77 (231)
Q Consensus 6 pnai~Va~~L~~~g~~~~GVRlDSGDl~~ls~~~R~~ld~~~~~l~i~g~~~v~Iv-------~S~~Lde~~I~~L~~~ 77 (231)
|...++|.++...+..+.-+++|..+-.. ..++|+|.+++.+.++ .+|..+++.+.++..+
T Consensus 167 p~~~~~a~~~~~~~~~v~~~~vd~~~~~~-----------l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~l~~ 234 (241)
T 3idv_A 167 PEYEKAAKELSKRSPPIPLAKVDATAETD-----------LAKRFDVSGYPTLKIFRKGRPYDYNGPREKYGIVDYMIE 234 (241)
T ss_dssp HHHHHHHHHHHTSSSCCCEEEEETTTCHH-----------HHHHTTCCSSSEEEEEETTEEEECCSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCcEEEEEEECCCCHH-----------HHHHcCCcccCEEEEEECCeEEEecCCCCHHHHHHHHHh
Confidence 56677788777655557777888765332 3345899888864433 3566788888776553
Done!