BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026889
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74507|YJD4_SCHPO Uncharacterized protein C594.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC594.04c PE=3 SV=2
Length = 344
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 50 IFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPEN 109
IFQ + ++ ++ P + + + + A D I ++ +E +ADQQ+ + + +
Sbjct: 164 IFQVLHLYLLASPTYIAMLAGNERAFGAWDWIALELFMFMFVLEMLADQQQWDYYEARNH 223
Query: 110 R-----------------GKWCNV-GFWKYSRHPNYFGEIFLWWGIF----VASTPVLDG 147
G+ N G +++SRHPN+ E +W + +AS +L+
Sbjct: 224 YNVDKTVPPRFKYDLLSLGRGFNATGLFRWSRHPNFLAEQLIWLSFYLFGAIASESLLN- 282
Query: 148 AEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIP 198
W + +L L+ +F L E+ + +K+ P YR+Y+ P
Sbjct: 283 --WTIF---AWLGLVGVFQGSTRLTEKMSCEKY---PLYRVYQDKVGRFFP 325
>sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1
PE=2 SV=2
Length = 255
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 80 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 139
+ G+ +W VG+ I +D + + E K G ++Y NYFGE+ W G +
Sbjct: 148 LTGFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSSANYFGELVEWCGFAL 207
Query: 140 AS 141
AS
Sbjct: 208 AS 209
>sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus
GN=Srd5a1 PE=1 SV=2
Length = 259
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 82 GWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAS 141
G+ +W VG+ I +D + + E K G ++Y NYFGE+ W G +AS
Sbjct: 154 GFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSAANYFGELVEWCGFALAS 213
>sp|Q9LDR4|ERG24_ARATH Delta(14)-sterol reductase OS=Arabidopsis thaliana GN=FK PE=1 SV=2
Length = 369
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 80 VIGWIMWSVGVSIEAIADQQKLSFKNSPEN----------RGKWCNVGFWKYSRHPNYFG 129
V+ +++ +G + A++QK FK +P+ GK G+W +RH NY G
Sbjct: 245 VVNCLVFLIGYMVFRGANKQKHIFKKNPKTPIWGKPPVVVGGKLLVSGYWGIARHCNYLG 304
Query: 130 EIFL 133
++ L
Sbjct: 305 DLML 308
>sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1
PE=1 SV=1
Length = 259
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 45 LAIFWIFQAVWVWTVSLPVTVVNASD--RDPSVQAVDVIGWIMWSVGVSIEAIADQQKLS 102
+AI + ++ + L V A D DP +IG+ +W G+ I +D +
Sbjct: 119 MAIMFCTCNGYLQSRYLSHCAVYADDWVTDPRF----LIGFGLWLTGMLINIHSDHILRN 174
Query: 103 FKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAS 141
+ + K G ++Y NYFGEI W G +AS
Sbjct: 175 LRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYALAS 213
>sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis
GN=SRD5A1 PE=1 SV=1
Length = 263
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 80 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 139
+IG+ +W G+ I +D + + + K G ++Y NYFGEI W G +
Sbjct: 156 LIGFGLWLAGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYAL 215
Query: 140 AS 141
AS
Sbjct: 216 AS 217
>sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1
PE=2 SV=1
Length = 257
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 80 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFV 139
+ G +W +G+ I +D + + E K G ++Y NYFGE+ W G +
Sbjct: 150 LTGSALWLIGMLINIHSDHVLRNLRKPGETGYKIPRGGLFEYISAANYFGEVVEWCGYAL 209
Query: 140 AS 141
AS
Sbjct: 210 AS 211
>sp|Q9UT20|YFY8_SCHPO Uncharacterized protein C9.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC9.08c PE=3 SV=1
Length = 282
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 84 IMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTP 143
I++ + S D L S + + G ++Y PNYF E W+G ++A+ P
Sbjct: 177 ILYDLRRSSNKKKDPDNLDTVQSENSYYRIPYGGLFQYVSCPNYFCEWIEWFGCYLAAGP 236
Query: 144 VLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYR 187
+ W FL+ +LL + + KKF PA R
Sbjct: 237 SAEPFWWF------FLSEILLMLPRALKAHQWYCKKFPKYPANR 274
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 146 DGAEWLVILGPIFLTLLLLFISGIPLLEES 175
+GAEW +I +F ++ F SG+P+L ES
Sbjct: 134 EGAEWSLIKPEVFAVIMDFFASGLPILHES 163
>sp|O46502|SCTR_RABIT Secretin receptor OS=Oryctolagus cuniculus GN=SCTR PE=2 SV=1
Length = 445
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 146 DGAEWLVILGPIFLTLLLLFISGIPLLE------ESADKKFGNMPAYRLYKKTTSPLIPL 199
+ A W VI GP+ L++L+ FI I +L + + + +M Y+ ++T LIPL
Sbjct: 287 NAAIWWVIRGPVILSILINFILFINILRILTRKLRTQETRGQDMNHYKRLARSTLLLIPL 346
Query: 200 PPVVY 204
V Y
Sbjct: 347 FGVHY 351
>sp|Q38944|DET2_ARATH Steroid 5-alpha-reductase DET2 OS=Arabidopsis thaliana GN=DET2 PE=1
SV=2
Length = 262
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 80 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWC--NVGFWKYSRHPNYFGEIFLWWG 136
VIG +++ G+ I +D+ + K ENRG + G+++ PNYFGE W G
Sbjct: 154 VIGMVVFITGMYINITSDRTLVRLKK--ENRGGYVIPRGGWFELVSCPNYFGEAIEWLG 210
>sp|Q89BK7|PCKA_BRAJA Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium japonicum
(strain USDA 110) GN=pckA PE=3 SV=1
Length = 538
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 144 VLDGAEWLVILGPIF----LTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPL 199
V+ A+ +L PI + F+SG ++ GN P SP +PL
Sbjct: 347 VMLAADAFGVLPPIAKLSPAQAMYHFLSGYTAKVAGTERGLGNEPQPEFSTCFGSPFLPL 406
Query: 200 PPVVYGNL 207
P VYGN+
Sbjct: 407 DPSVYGNM 414
>sp|A5EST5|PCKA_BRASB Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=pckA PE=3 SV=1
Length = 537
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 144 VLDGAEWLVILGPIF----LTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPL 199
V+ A+ +L PI + F+SG ++ GN P SP +PL
Sbjct: 346 VMLAADAFGVLPPIAKLSPAQAMYHFLSGYTAKVAGTERGLGNEPQPEFSTCFGSPFLPL 405
Query: 200 PPVVYGNL 207
P VYGN+
Sbjct: 406 DPSVYGNM 413
>sp|P23913|LBR_CHICK Lamin-B receptor OS=Gallus gallus GN=LBR PE=1 SV=1
Length = 637
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 13/63 (20%)
Query: 84 IMWSVGVSIEAIADQQKLSFKNSPEN------------RGKWCNV-GFWKYSRHPNYFGE 130
I+ +G I A+ QK +F+ +P + GK V G+W + RHPNY G+
Sbjct: 485 ILNCIGYYIFRSANSQKNNFRRNPADPKLSYLKVIPTATGKGLLVTGWWGFVRHPNYLGD 544
Query: 131 IFL 133
I +
Sbjct: 545 IIM 547
>sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum GN=DET2 PE=1
SV=1
Length = 258
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 80 VIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWG 136
+ G +++ VG+ + AD+ + K + K G ++ PNYFGEI W+G
Sbjct: 150 LAGLLIFVVGMWVNVRADKVLVGLKKQGDGGYKIPRGGLFELVSCPNYFGEIMEWFG 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.486
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,744,063
Number of Sequences: 539616
Number of extensions: 3801509
Number of successful extensions: 9189
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 9173
Number of HSP's gapped (non-prelim): 25
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)