Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>026890
MASLGIHYGGGGGGGAGATFSSNRRGTITKIRYPTASLNVTPAMSENRKCQAMPISISSS
RADIDLVEPKRKQERSVSTENVIDKWMKDSVVEIVKNLRETPLLVHVYSDSGSGDSTRLK
TEKAVPDDWPLMKSKWEDGTTPLPEGVIFVEQLKEEDAADDSGGESEITRAWGILVQAKG
EGCGPACYLLKTSRAGAGSGLGLCCTHFCLVKVKSFRETAEAQFKNCWLLN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026890
        (231 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2153509 - symbol:AT5G05250 "AT5G05250" species...   430  2.0e-40   1
TAIR|locus:2102489 - symbol:AT3G56360 "AT3G56360" species...   425  6.8e-40   1


>TAIR|locus:2153509 [details] [associations]
            symbol:AT5G05250 "AT5G05250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB010692 EMBL:AY054291
            IPI:IPI00548957 RefSeq:NP_568152.1 UniGene:At.26381 STRING:Q9FLC9
            EnsemblPlants:AT5G05250.1 GeneID:830407 KEGG:ath:AT5G05250
            TAIR:At5g05250 eggNOG:NOG288610 HOGENOM:HOG000152542
            InParanoid:Q9FLC9 OMA:MAYAKIG PhylomeDB:Q9FLC9
            ProtClustDB:CLSN2917568 Genevestigator:Q9FLC9 Uniprot:Q9FLC9
        Length = 239

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 98/216 (45%), Positives = 132/216 (61%)

Query:    23 NRRGTITKIRYPTASLNVTPAMSENRKCQAMPISISSSRADIDLVEPKRKQERSVSTENV 82
             NRR +I      T S ++  A++E  K +    S   SR D   VE +R++         
Sbjct:    43 NRRSSIG-----TISASIGEAVTEIEKQRGGRRSGGRSRGDRWEVEAEREK--------- 88

Query:    83 IDKWMKDSVVEIVKNLRETPLLVHVYS-DSGSGDSTRLKTEKAVPDDWPLMKSKWEDGTT 141
             +D+WMK+SV EIVKNL E PLLVH+Y+ D   G    +K E     +W  +K +WE G  
Sbjct:    89 LDRWMKESVTEIVKNLSEAPLLVHLYTGDKEEGTVVVMKAE-----EWAAVKGRWERGEA 143

Query:   142 PLPEGVIFVEQL---KEEDAADDSGGESEITRAWGILVQAKGEGCGPACYLLKTSR---- 194
              +PEG++FVEQL   +E       GG+   TRAWG++VQ +G  CGP CYLLKT+R    
Sbjct:   144 EMPEGIVFVEQLGAAEESCGCGFDGGDG--TRAWGLVVQGRGVECGPVCYLLKTTRVGSG 201

Query:   195 AGAGSGLGLCCTHFCLVKVKSFRETAEAQFKNCWLL 230
             +G+GSGLG+ CTHFCL KV SFRET+E+Q +NCWL+
Sbjct:   202 SGSGSGLGMRCTHFCLAKVSSFRETSESQLRNCWLV 237


>TAIR|locus:2102489 [details] [associations]
            symbol:AT3G56360 "AT3G56360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009536 "plastid"
            evidence=IDA] GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AL163972 UniGene:At.25520 eggNOG:NOG288610 EMBL:AY120780
            EMBL:AY085273 EMBL:BT006277 IPI:IPI00542786 PIR:T49037
            RefSeq:NP_191195.1 IntAct:Q9LY04 STRING:Q9LY04
            EnsemblPlants:AT3G56360.1 GeneID:824803 KEGG:ath:AT3G56360
            TAIR:At3g56360 HOGENOM:HOG000091170 InParanoid:Q9LY04 OMA:SARICCG
            PhylomeDB:Q9LY04 ProtClustDB:CLSN2913455 ArrayExpress:Q9LY04
            Genevestigator:Q9LY04 Uniprot:Q9LY04
        Length = 233

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 95/202 (47%), Positives = 122/202 (60%)

Query:    40 VTPAMSENRKCQAMPISIS-------SSRADIDLVEPKRKQERSVSTENVIDKWMKDSVV 92
             V P  +    C    IS+S       S+   I+ +   RK+  SV +   +D W++DSVV
Sbjct:    33 VVPVTNRRNMCAIGKISMSMEDLSPPSAAVKIERIGG-RKRGGSVVSREKLDVWLRDSVV 91

Query:    93 EIVKNLRETPLLVHVYSDSGSGDSTRLKTEKAVPDDWPLMKSKWEDGTTPLPEGVIFVEQ 152
             EIVKNLRE+PLL+H+Y+++  G +T     KA  +DW  M+ KW  G    PEGVI VE+
Sbjct:    92 EIVKNLRESPLLMHLYAEANGGLTTTATNPKA--EDWTEMEGKWGRGEERTPEGVILVEK 149

Query:   153 LKEEDAADDS---GGE-SEITRAWGILVQAKGEGCGPACYLLKTSRAGAGSGLGLCCTHF 208
             L + D ADD    GG   E T AWGI+ Q +G   GP CYLLKT+R    SG+G  CTHF
Sbjct:   150 LADGDIADDDDHDGGACGEDTSAWGIVAQGRGSDTGPVCYLLKTTRVR--SGMGTVCTHF 207

Query:   209 CLVKVKSFRETAEAQFKNCWLL 230
             CLVKVKSFRETA +Q  N WL+
Sbjct:   208 CLVKVKSFRETAMSQLNNSWLV 229


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      231       221   0.00095  112 3  11 23  0.43    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  185 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.14u 0.08s 22.22t   Elapsed:  00:00:00
  Total cpu time:  22.14u 0.08s 22.22t   Elapsed:  00:00:01
  Start:  Sat May 11 09:43:11 2013   End:  Sat May 11 09:43:12 2013

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