Query 026890
Match_columns 231
No_of_seqs 19 out of 21
Neff 2.8
Searched_HMMs 29240
Date Tue Mar 26 00:45:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3teo_A Carbon disulfide hydrol 61.1 2.4 8.3E-05 36.0 0.9 75 31-105 71-165 (204)
2 1jdp_H CNP, C-type natriuretic 31.1 16 0.00055 22.6 0.9 19 185-203 4-22 (26)
3 1z4h_A TORI, TOR inhibition pr 18.8 69 0.0024 21.4 2.3 29 65-93 35-63 (66)
4 1dkc_A PAFP-S, antifungal pept 16.5 58 0.002 21.6 1.4 13 200-212 15-27 (38)
5 3l8h_A Putative haloacid dehal 15.4 1.1E+02 0.0037 22.4 2.8 68 78-153 60-127 (179)
6 1q01_A Lebetin 2 isoform alpha 15.1 36 0.0012 22.7 0.1 20 184-203 11-30 (38)
7 1yk0_E Atrial natriuretic fact 14.4 36 0.0012 21.0 -0.0 18 187-204 2-19 (26)
8 1q3j_A ALO3; peptide, knottin, 13.0 44 0.0015 21.9 0.1 13 200-212 13-25 (36)
9 3fz2_A Minor tail protein U; m 12.5 1.1E+02 0.0036 24.8 2.2 23 77-99 74-96 (134)
10 3n57_C Atrial natriuretic fact 12.3 55 0.0019 20.5 0.4 20 185-204 5-24 (28)
No 1
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A*
Probab=61.12 E-value=2.4 Score=36.04 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=44.8
Q ss_pred cccCCcccccccc-ccccccCCCceeeeeecccee-----cccccc---cccccccchhhHHHHHH-----------HHH
Q 026890 31 IRYPTASLNVTPA-MSENRKCQAMPISISSSRADI-----DLVEPK---RKQERSVSTENVIDKWM-----------KDS 90 (231)
Q Consensus 31 ~~~~~~~~~~r~~-~~~~~~s~~~~~s~s~s~~~~-----d~~~~~---~~~~~~~~~~ek~e~Wm-----------reS 90 (231)
+-|......++-- +=+|++|++++.....-+.-+ ++..-. -.+.-.......++.|+ +++
T Consensus 71 l~~av~~L~v~~IvV~GHt~CG~~~a~~~~~~~~~~~~g~~~~~i~~~~~~p~~~~~~~~~~~~Wl~~~~d~~~~~vees 150 (204)
T 3teo_A 71 ASLTTNFFGTKEIIVVTHTDCGMLRFTGEEVAKYFISKGIKPTEVQLDPLLPAFRISSEEDFIKWFKFYEDLGVKSPDEM 150 (204)
T ss_dssp HHHHHHHSCCCEEEEEEETTCGGGTSCHHHHHHHHHTTTCCTTTCCSCTTCTTCCCCSHHHHHHHTCCHHHHTCCSHHHH
T ss_pred HHHHHHhcCCCEEEEEeecCCcceeccHHHHHHHHHhcCCCcchhccccccccccccccccHHhhhccccchhhccHHHH
Confidence 4454445556555 778999999887754221111 111000 00000111257889995 799
Q ss_pred HHHHHhcCCCCccEE
Q 026890 91 VVEIVKNLRETPLLV 105 (231)
Q Consensus 91 V~EIVKnl~EAPfL~ 105 (231)
|.+-|+.|+.+||+-
T Consensus 151 V~~~V~~Lr~~Plip 165 (204)
T 3teo_A 151 ALKGVEILRNHPLIP 165 (204)
T ss_dssp HHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHhCCCCC
Confidence 999999999999985
No 2
>1jdp_H CNP, C-type natriuretic peptide; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, signaling protein; HET: NDG NAG; 2.00A {Homo sapiens}
Probab=31.12 E-value=16 Score=22.64 Aligned_cols=19 Identities=47% Similarity=0.780 Sum_probs=16.8
Q ss_pred CceEEeeecccCCCCCCCc
Q 026890 185 PACYLLKTSRAGAGSGLGL 203 (231)
Q Consensus 185 ~~CYlLKTtRv~S~~glG~ 203 (231)
++|+=.|-=|+.|-+||||
T Consensus 4 ~gCFG~riDRIgs~SglGC 22 (26)
T 1jdp_H 4 KGCFGLKLDRIGSMSGLGC 22 (26)
T ss_pred ccccCceecccccccCCCc
Confidence 5799999999999889876
No 3
>1z4h_A TORI, TOR inhibition protein; winged helix, reverse turn, protein binding, DNA binding protein; NMR {Escherichia coli}
Probab=18.79 E-value=69 Score=21.38 Aligned_cols=29 Identities=14% Similarity=0.005 Sum_probs=22.3
Q ss_pred cccccccccccccchhhHHHHHHHHHHHH
Q 026890 65 DLVEPKRKQERSVSTENVIDKWMKDSVVE 93 (231)
Q Consensus 65 d~~~~~~~~~~~~~~~ek~e~WmreSV~E 93 (231)
++|.+..=+++.......|+.|+.+.+.+
T Consensus 35 ~fP~piklG~~~~w~~~ev~~Wl~~~~~~ 63 (66)
T 1z4h_A 35 DLPKAKVIHGRARWLYRDHCEFKNKLLSR 63 (66)
T ss_dssp HCCCSEESSSCEEEEHHHHHHHHHHHHHH
T ss_pred CCCCCEEeCCCeEEeHHHHHHHHHHHHHh
Confidence 34776666666678899999999987664
No 4
>1dkc_A PAFP-S, antifungal peptide; three-strands beta sheet, antifungal protein; NMR {Phytolacca americana} SCOP: g.3.4.2
Probab=16.53 E-value=58 Score=21.60 Aligned_cols=13 Identities=31% Similarity=1.076 Sum_probs=11.0
Q ss_pred CCCceeeeeeeee
Q 026890 200 GLGLCCTHFCLVK 212 (231)
Q Consensus 200 glG~~CTHFCL~k 212 (231)
++|.||.-|||--
T Consensus 15 s~g~CcSGfC~q~ 27 (38)
T 1dkc_A 15 GPPYCCSSYCFQI 27 (38)
T ss_dssp CCCCCSSSEEEEE
T ss_pred CCcccccceeEec
Confidence 6789999999854
No 5
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=15.35 E-value=1.1e+02 Score=22.38 Aligned_cols=68 Identities=10% Similarity=0.183 Sum_probs=40.7
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCccEEEeecCCCCCCeeeEeecCCCCCChhhHHhhhcCCCCCCCCeEEEEEec
Q 026890 78 STENVIDKWMKDSVVEIVKNLRETPLLVHVYSDSGSGDSTRLKTEKAVPDDWPLMKSKWEDGTTPLPEGVIFVEQL 153 (231)
Q Consensus 78 ~~~ek~e~WmreSV~EIVKnl~EAPfL~~Vfs~~g~g~~~tlk~~~a~pE~Wp~I~e~w~~g~~~~PdGVILVe~l 153 (231)
.+.+.++. +.+.+..+.+++. ..+..+|... -.+.......|+.|+.+..+.++++ ..|+-+|+|.--
T Consensus 60 ~~~~~~~~-~~~~~~~~l~~~g--~~~~~~~~~~-~~~~~~~~~~KP~~~~~~~~~~~~~----~~~~~~~~vGD~ 127 (179)
T 3l8h_A 60 FDTATLNA-IHDKMHRALAQMG--GVVDAIFMCP-HGPDDGCACRKPLPGMYRDIARRYD----VDLAGVPAVGDS 127 (179)
T ss_dssp SCHHHHHH-HHHHHHHHHHHTT--CCCCEEEEEC-CCTTSCCSSSTTSSHHHHHHHHHHT----CCCTTCEEEESS
T ss_pred CCHHHHHH-HHHHHHHHHHhCC--CceeEEEEcC-CCCCCCCCCCCCCHHHHHHHHHHcC----CCHHHEEEECCC
Confidence 34444443 3355667777777 3444555322 0111112445677899999999996 688888888753
No 6
>1q01_A Lebetin 2 isoform alpha; beta-bulged hairpain, blood clotting; NMR {Macrovipera lebetina}
Probab=15.15 E-value=36 Score=22.68 Aligned_cols=20 Identities=40% Similarity=0.659 Sum_probs=17.5
Q ss_pred CCceEEeeecccCCCCCCCc
Q 026890 184 GPACYLLKTSRAGAGSGLGL 203 (231)
Q Consensus 184 a~~CYlLKTtRv~S~~glG~ 203 (231)
+++|+=.|-=|+.|.+||||
T Consensus 11 ~sgCFG~riDRIGs~SglGC 30 (38)
T 1q01_A 11 PNGCFGHKIDRIGSHSGLGC 30 (38)
T ss_dssp SSSSSCCTTSCCCSSCCCCC
T ss_pred CCCccccccccccccccCCC
Confidence 46899999999998889987
No 7
>1yk0_E Atrial natriuretic factor; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, hormone-growth factor receptor complex; HET: NAG; 2.40A {Homo sapiens} PDB: 1t34_H*
Probab=14.37 E-value=36 Score=21.04 Aligned_cols=18 Identities=44% Similarity=0.711 Sum_probs=14.1
Q ss_pred eEEeeecccCCCCCCCce
Q 026890 187 CYLLKTSRAGAGSGLGLC 204 (231)
Q Consensus 187 CYlLKTtRv~S~~glG~~ 204 (231)
|+=.|-=|+.|.+||||.
T Consensus 2 CFG~riDRIgs~SglGC~ 19 (26)
T 1yk0_E 2 CFGGRMDRIGAQSGLGCN 19 (26)
T ss_dssp TTCSCCCCCSSSCCSCCC
T ss_pred CcCccccccccccCCCCC
Confidence 666677789988899874
No 8
>1q3j_A ALO3; peptide, knottin, cystine-knot, antifungal protein; NMR {Synthetic} SCOP: g.3.4.2
Probab=12.99 E-value=44 Score=21.92 Aligned_cols=13 Identities=31% Similarity=1.025 Sum_probs=10.8
Q ss_pred CCCceeeeeeeee
Q 026890 200 GLGLCCTHFCLVK 212 (231)
Q Consensus 200 glG~~CTHFCL~k 212 (231)
++|.||.-||+--
T Consensus 13 s~g~CcSGfC~q~ 25 (36)
T 1q3j_A 13 SQGNCCSGYCHKQ 25 (36)
T ss_dssp SSCCCTTSCEECC
T ss_pred CCcccccceeEec
Confidence 6789999999854
No 9
>3fz2_A Minor tail protein U; mixed alpha-beta fold, viral protein; 2.70A {Enterobacteria phage lambda} SCOP: d.323.1.1 PDB: 3fzb_A 1z1z_A
Probab=12.53 E-value=1.1e+02 Score=24.85 Aligned_cols=23 Identities=13% Similarity=0.495 Sum_probs=19.6
Q ss_pred cchhhHHHHHHHHHHHHHHhcCC
Q 026890 77 VSTENVIDKWMKDSVVEIVKNLR 99 (231)
Q Consensus 77 ~~~~ek~e~WmreSV~EIVKnl~ 99 (231)
..++..||+||++-|.+++..+-
T Consensus 74 ~~~ds~LD~w~ee~I~~~l~~~~ 96 (134)
T 3fz2_A 74 QVPASELDAWMESRIYPVMSDIP 96 (134)
T ss_dssp TSCHHHHHHHHHHHTHHHHTCCH
T ss_pred CCChHHHHHHHHHHHHHHHhcch
Confidence 67889999999999999887643
No 10
>3n57_C Atrial natriuretic factor; insulysin, insulinase, A-beta degrading enzyme, cryptidase, hydrolase, hormone, disease mutation, diabetes mellitus; 3.03A {Homo sapiens} PDB: 1anp_A
Probab=12.28 E-value=55 Score=20.51 Aligned_cols=20 Identities=40% Similarity=0.665 Sum_probs=17.6
Q ss_pred CceEEeeecccCCCCCCCce
Q 026890 185 PACYLLKTSRAGAGSGLGLC 204 (231)
Q Consensus 185 ~~CYlLKTtRv~S~~glG~~ 204 (231)
++|+=.|-=|+.+.+||||.
T Consensus 5 ~gCFG~riDRIgs~SglGC~ 24 (28)
T 3n57_C 5 SSCFGGRMDRIGAQSGLGCN 24 (28)
T ss_pred ccccCcccccccccccCCcC
Confidence 57999999999998999875
Done!