Your job contains 1 sequence.
>026891
MRRSLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYR
RRYPDEFLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGA
PGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDV
PSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEYFPESAEFLNKMIIS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026891
(231 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204533 - symbol:DECOY "AT1G14620" species:370... 903 1.5e-90 1
DICTYBASE|DDB_G0290311 - symbol:DDB_G0290311 "54S ribosom... 248 3.9e-21 1
SGD|S000005196 - symbol:MRPL17 "Mitochondrial ribosomal p... 184 8.1e-19 2
UNIPROTKB|Q9H2W6 - symbol:MRPL46 "39S ribosomal protein L... 200 2.1e-18 2
UNIPROTKB|E1C892 - symbol:MRPL46 "Uncharacterized protein... 219 4.6e-18 1
ZFIN|ZDB-GENE-040718-224 - symbol:mrpl46 "mitochondrial r... 186 3.7e-17 2
CGD|CAL0000338 - symbol:orf19.585 species:5476 "Candida a... 169 9.3e-17 2
UNIPROTKB|Q59X93 - symbol:MRPL17 "Likely mitochondrial ri... 169 9.3e-17 2
UNIPROTKB|E2R6F9 - symbol:MRPL46 "Uncharacterized protein... 205 1.4e-16 1
UNIPROTKB|F6XH70 - symbol:MRPL46 "Uncharacterized protein... 205 1.4e-16 1
UNIPROTKB|F1N499 - symbol:MRPL46 "39S ribosomal protein L... 179 3.4e-16 2
UNIPROTKB|Q3SZ22 - symbol:MRPL46 "39S ribosomal protein L... 179 3.4e-16 2
UNIPROTKB|F1SRT0 - symbol:LOC100523040 "Uncharacterized p... 194 2.0e-15 1
MGI|MGI:1914558 - symbol:Mrpl46 "mitochondrial ribosomal ... 191 4.2e-15 1
RGD|1309123 - symbol:Mrpl46 "mitochondrial ribosomal prot... 189 6.9e-15 1
UNIPROTKB|Q5RK00 - symbol:Mrpl46 "39S ribosomal protein L... 189 6.9e-15 1
ASPGD|ASPL0000066251 - symbol:AN10922 species:162425 "Eme... 185 4.8e-14 1
WB|WBGene00021935 - symbol:mrpl-46 species:6239 "Caenorha... 125 2.0e-08 2
FB|FBgn0035272 - symbol:mRpL46 "mitochondrial ribosomal p... 122 1.6e-05 1
POMBASE|SPCC126.05c - symbol:mrpl17 "mitochondrial riboso... 116 2.2e-05 2
>TAIR|locus:2204533 [details] [associations]
symbol:DECOY "AT1G14620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] EMBL:CP002684 GO:GO:0005739 InterPro:IPR021757
Pfam:PF11788 EMBL:AY127001 EMBL:BT001031 IPI:IPI00529883
RefSeq:NP_172914.1 UniGene:At.11695 ProteinModelPortal:Q8L7U3
IntAct:Q8L7U3 STRING:Q8L7U3 PRIDE:Q8L7U3 DNASU:838024
EnsemblPlants:AT1G14620.1 GeneID:838024 KEGG:ath:AT1G14620
TAIR:At1g14620 HOGENOM:HOG000006153 InParanoid:Q8L7U3 OMA:PVWHFPE
PhylomeDB:Q8L7U3 ProtClustDB:CLSN2682967 Genevestigator:Q8L7U3
Uniprot:Q8L7U3
Length = 233
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 164/231 (70%), Positives = 196/231 (84%)
Query: 2 RRSLTSLVRPLTATR-GFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYR 60
R SL L +PL +R GF T+S+KIVASVLFERL VVIPK DP VYAFQEF F W+QQ+R
Sbjct: 3 RSSLRLLAKPLLESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFR 62
Query: 61 RRYPDEFLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGA 120
RRYPDEFLD + +R KG+YQM+YVPAPRITE DK NDRKSL RALD++LYL+++G+ FGA
Sbjct: 63 RRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGA 122
Query: 121 PGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDV 180
KP+WHFPEKVY+SE +LRKCAE AL+SV+GDL+HTYFVGNAPM HM +QP E+MPD+
Sbjct: 123 TSDKPVWHFPEKVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDL 182
Query: 181 PSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEYFPESAEFLNKMIIS 231
PSYK+FFFK V+A++K+ I CEDFVWVTKDEL+E+FPE AEF NKMIIS
Sbjct: 183 PSYKRFFFKCSVVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233
>DICTYBASE|DDB_G0290311 [details] [associations]
symbol:DDB_G0290311 "54S ribosomal protein L17,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR015797 dictyBase:DDB_G0290311
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 EMBL:AAFI02000162
InterPro:IPR021757 Pfam:PF11788 eggNOG:NOG256490 RefSeq:XP_635795.1
ProteinModelPortal:Q54G88 EnsemblProtists:DDB0188832 GeneID:8627600
KEGG:ddi:DDB_G0290311 InParanoid:Q54G88 OMA:RAHYFGG Uniprot:Q54G88
Length = 361
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 67/206 (32%), Positives = 107/206 (51%)
Query: 31 FERLPVVIPKIDPVVY-AFQEFSFRWRQQYRRRYPDEFLDKSNSRGKGDYQMEYVPAPRI 89
+ERL ++ + DP+ + + E +++Q R + D D+ D+ Y P PR
Sbjct: 158 YERLQEIVRR-DPIRFVSIVEDLPEFKEQQREKNEDNLQDEFEE----DFS-NYTPEPRE 211
Query: 90 TETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQ 149
TE D NDRKSL R LD+ LYLI+ G + W FP + + ES++ CAE +L+
Sbjct: 212 TEADLKNDRKSLDRKLDKSLYLII-----NKSGSRYDWQFPSTNWINGESMKNCAERSLR 266
Query: 150 SVLGDLSHTYFV-GNAPMG---HMVMQPAEKMPDVPSYKQFFFKSQVIASNKFTIGK--C 203
LG + YF+ AP G + V +++ K+FF+++ + F I
Sbjct: 267 DSLGS-NWKYFIPSQAPCGVYKYNVDDDIQELIKAQGIKEFFYRAHYFGGD-FQINPKIV 324
Query: 204 EDFVWVTKDELMEYFPESAEFLNKMI 229
+D++WVTKDEL EYF E ++ N+ +
Sbjct: 325 KDYLWVTKDELQEYFDE--DYYNETV 348
>SGD|S000005196 [details] [associations]
symbol:MRPL17 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IDA;IPI] [GO:0032543 "mitochondrial translation"
evidence=IC] SGD:S000005196 EMBL:BK006947 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 EMBL:X96722 OMA:RLMWTFP
OrthoDB:EOG47H909 InterPro:IPR021757 Pfam:PF11788 EMBL:Z71528
EMBL:AY558015 PIR:S63225 RefSeq:NP_014147.1
ProteinModelPortal:P36528 DIP:DIP-4278N IntAct:P36528
MINT:MINT-487311 STRING:P36528 PaxDb:P36528 EnsemblFungi:YNL252C
GeneID:855469 KEGG:sce:YNL252C CYGD:YNL252c eggNOG:NOG256490
HOGENOM:HOG000248758 NextBio:979412 Genevestigator:P36528
GermOnline:YNL252C Uniprot:P36528
Length = 281
Score = 184 (69.8 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 55/167 (32%), Positives = 83/167 (49%)
Query: 67 FLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPI 126
F + + K D +P RITE D++ND KSL+R L R LYL++ ++ G
Sbjct: 124 FSNNQKEQSKDDVNRPVIPNDRITEADRSNDMKSLERQLSRTLYLLVKDKS-GT------ 176
Query: 127 WHFPE-KVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSYKQ 185
W FP + + + L AE L+ + GD +T+ V P+G V+Q +
Sbjct: 177 WKFPNFDLSDESKPLHVHAENELKLLSGDQIYTWSVSATPIG--VLQDERNRT-----AE 229
Query: 186 FFFKSQVIASNKFTI--GK---CEDFVWVTKDELMEYFPESAEFLNK 227
F KS ++A KF + K EDF W+TK E+ EY P+ ++ NK
Sbjct: 230 FIVKSHILAG-KFDLVASKNDAFEDFAWLTKGEISEYVPK--DYFNK 273
Score = 56 (24.8 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 13 TATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYRRRYPDEFLDKSN 72
TAT S+ KI VL R+P++ +++ + + E+ ++ +P F K
Sbjct: 13 TATATASSAPPKIKVGVLLSRIPIIKSELNELEKKYYEYQSELEKRLMWTFPAYFYFKKG 72
Query: 73 S 73
+
Sbjct: 73 T 73
>UNIPROTKB|Q9H2W6 [details] [associations]
symbol:MRPL46 "39S ribosomal protein L46, mitochondrial"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR015797
GO:GO:0005739 Gene3D:3.90.79.10 GO:GO:0005840 GO:GO:0016787
EMBL:CH471101 InterPro:IPR021757 Pfam:PF11788 eggNOG:NOG256490
CTD:26589 HOGENOM:HOG000047532 HOVERGEN:HBG057426 OrthoDB:EOG46MBKN
EMBL:AF210056 EMBL:AF205435 EMBL:AK315434 EMBL:BC017883
IPI:IPI00023161 RefSeq:NP_071446.2 UniGene:Hs.534261
ProteinModelPortal:Q9H2W6 SMR:Q9H2W6 IntAct:Q9H2W6 STRING:Q9H2W6
PhosphoSite:Q9H2W6 DMDM:52783325 PaxDb:Q9H2W6 PRIDE:Q9H2W6
DNASU:26589 GeneID:26589 KEGG:hsa:26589 UCSC:uc002bmj.2
GeneCards:GC15M089002 GeneCards:GC15M089003 H-InvDB:HIX0012555
HGNC:HGNC:1192 MIM:611851 neXtProt:NX_Q9H2W6 PharmGKB:PA30978
InParanoid:Q9H2W6 OMA:GHHVWVT PhylomeDB:Q9H2W6 GenomeRNAi:26589
NextBio:48962 ArrayExpress:Q9H2W6 Bgee:Q9H2W6 CleanEx:HS_MRPL46
Genevestigator:Q9H2W6 GermOnline:ENSG00000173867 Uniprot:Q9H2W6
Length = 279
Score = 200 (75.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 50/139 (35%), Positives = 74/139 (53%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ RITE D+ NDR SL R LDR L L++ E FG + +W P+ ++ E+L
Sbjct: 129 LQFKLGARITEADEKNDRTSLNRKLDRNLVLLVR-EKFG---DQDVWILPQAEWQPGETL 184
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSY--KQFFFKSQVIASNKF 198
R AE L ++ + F+GNAP GH + + M + K FFFK+ ++ +
Sbjct: 185 RGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFS 244
Query: 199 TIGKCEDFVWVTKDELMEY 217
G VWVTKDEL +Y
Sbjct: 245 QAGNKGHHVWVTKDELGDY 263
Score = 36 (17.7 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 4 SLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPV 44
SL+S L A + + +++ ++ +R PVV + P+
Sbjct: 26 SLSSRSLALAAAPSSNGSPWRLLGALCLQRPPVVSKPLTPL 66
>UNIPROTKB|E1C892 [details] [associations]
symbol:MRPL46 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR015797
GO:GO:0005739 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
InterPro:IPR021757 Pfam:PF11788 OMA:GHHVWVT
GeneTree:ENSGT00390000015400 EMBL:AADN02041512 IPI:IPI00572498
ProteinModelPortal:E1C892 Ensembl:ENSGALT00000010970 Uniprot:E1C892
Length = 279
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 53/150 (35%), Positives = 84/150 (56%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ PAPR+T+ DK NDR SL R LD L L++ + G + +W P+ ++ E+L
Sbjct: 129 LQFSPAPRVTDADKKNDRTSLNRKLDSNLMLLVKQKI----GNQELWLLPQVEWQPGETL 184
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMG-HMVMQP-AEKMPDVPSYKQFFFKSQVIASNKF 198
R E A+ + LGD +GNAP G + P A + D K FF+K+ + +S+
Sbjct: 185 RSTVERAMATFLGDHIQAKILGNAPYGIYKYKFPRAIRTEDNVGAKVFFYKAFLQSSDLS 244
Query: 199 TIGKCEDFVWVTKDELMEYFPESAEFLNKM 228
+D++WVTKDEL +Y +E+L K+
Sbjct: 245 QAELKKDYLWVTKDELGDYL--KSEYLKKV 272
>ZFIN|ZDB-GENE-040718-224 [details] [associations]
symbol:mrpl46 "mitochondrial ribosomal protein L46"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR015797 ZFIN:ZDB-GENE-040718-224 Gene3D:3.90.79.10
GO:GO:0016787 InterPro:IPR021757 Pfam:PF11788 CTD:26589
HOVERGEN:HBG057426 EMBL:BC076280 IPI:IPI00851296
RefSeq:NP_001002518.1 UniGene:Dr.75555 PRIDE:Q6DGR0 GeneID:436791
KEGG:dre:436791 InParanoid:Q6DGR0 NextBio:20831224 Bgee:Q6DGR0
Uniprot:Q6DGR0
Length = 286
Score = 186 (70.5 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 54/154 (35%), Positives = 85/154 (55%)
Query: 82 EYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLR 141
++ PAPR+ + D D SL+R L L L++ + G + IW P+ +++ E+LR
Sbjct: 139 QFQPAPRL-QGDGETDMSSLERCLADSLVLLVQKDV----GSQKIWLLPQIEWQTGETLR 193
Query: 142 KCAECALQSVLG-DLSHTYFVGNAPMG-HMVMQPAEKMPD-VPSYKQFFFKSQVIASNKF 198
+ AE AL S+ G DL T F+GNAP G + P + + + K FFFK+ V++S K
Sbjct: 194 QTAERALASLPGADLKAT-FLGNAPCGFYKYKYPKDVQKEGLVGAKVFFFKA-VMSSQKH 251
Query: 199 TIGKCEDFVWVTKDELMEYF-PESAEFLNKMIIS 231
+ F WV KDEL E+ PE + + + I++
Sbjct: 252 LPLEKNTFAWVKKDELQEFLKPEYLKQVRRFIMT 285
Score = 38 (18.4 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 28 SVLFERLPVVIPKIDPVVYAFQE 50
+V +RLPVV P+ F E
Sbjct: 54 AVCLQRLPVVSQDRSPIEEDFME 76
>CGD|CAL0000338 [details] [associations]
symbol:orf19.585 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] CGD:CAL0000338
EMBL:AACQ01000109 EMBL:AACQ01000108 InterPro:IPR021757 Pfam:PF11788
eggNOG:NOG256490 RefSeq:XP_714171.1 RefSeq:XP_714212.1
STRING:Q59X93 GeneID:3644128 GeneID:3644157 KEGG:cal:CaO19.585
KEGG:cal:CaO19.8217 Uniprot:Q59X93
Length = 283
Score = 169 (64.5 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 60/196 (30%), Positives = 95/196 (48%)
Query: 36 VVIPKIDPVVYAFQEFSFRWRQQYRRRYPDE--FLD-KSNSRGKGDYQMEYVPAPRITET 92
V+ P+ P + ++ FR + + Y +E ++ + N++ D + VP RITE
Sbjct: 92 VIYPRGKPDLKHNRDRRFRQYIRLPKTYKEESELVEGEENTQSDQDIARKIVPNSRITEA 151
Query: 93 DKTNDRKSLQRALDRRLYLIL-YGETFGAPGGKPIWHFPE-KVYESEE--SLRKCAECAL 148
DK ND SL+R L R LYL++ E+ G W FP K E+ + L + AE L
Sbjct: 152 DKKNDSTSLERKLSRTLYLVVKQSESDGE------WKFPNFKQPENGDLVPLHELAETGL 205
Query: 149 QSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSYKQFFFKSQVIASNKFTIGKCEDFVW 208
S+ G + + V P H++ + S KQ+F KS +++ K +F W
Sbjct: 206 YSIGGKKINYFNVSRVPC-HVIQDSKD------SSKQYFIKSHILSGAFEAQEKDVEFKW 258
Query: 209 VTKDELMEYFPESAEF 224
+TK+EL E SAE+
Sbjct: 259 LTKEELGECL--SAEY 272
Score = 55 (24.4 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 1 MRRSLTSLVRPLTATRGFSTNSEKIVASVLFERLPVV---IPKIDPVVYAFQEFSFRWRQ 57
MR S V +T ST+S I ++++ RLP++ +PK D Y +Q + WR+
Sbjct: 1 MRGSTFHKVIRTYSTTPASTSSS-ISSTLVLSRLPIITPDVPKFDQQFYNYQ--TELWRR 57
>UNIPROTKB|Q59X93 [details] [associations]
symbol:MRPL17 "Likely mitochondrial ribosomal protein
MRPL17p" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] CGD:CAL0000338 EMBL:AACQ01000109
EMBL:AACQ01000108 InterPro:IPR021757 Pfam:PF11788 eggNOG:NOG256490
RefSeq:XP_714171.1 RefSeq:XP_714212.1 STRING:Q59X93 GeneID:3644128
GeneID:3644157 KEGG:cal:CaO19.585 KEGG:cal:CaO19.8217
Uniprot:Q59X93
Length = 283
Score = 169 (64.5 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 60/196 (30%), Positives = 95/196 (48%)
Query: 36 VVIPKIDPVVYAFQEFSFRWRQQYRRRYPDE--FLD-KSNSRGKGDYQMEYVPAPRITET 92
V+ P+ P + ++ FR + + Y +E ++ + N++ D + VP RITE
Sbjct: 92 VIYPRGKPDLKHNRDRRFRQYIRLPKTYKEESELVEGEENTQSDQDIARKIVPNSRITEA 151
Query: 93 DKTNDRKSLQRALDRRLYLIL-YGETFGAPGGKPIWHFPE-KVYESEE--SLRKCAECAL 148
DK ND SL+R L R LYL++ E+ G W FP K E+ + L + AE L
Sbjct: 152 DKKNDSTSLERKLSRTLYLVVKQSESDGE------WKFPNFKQPENGDLVPLHELAETGL 205
Query: 149 QSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSYKQFFFKSQVIASNKFTIGKCEDFVW 208
S+ G + + V P H++ + S KQ+F KS +++ K +F W
Sbjct: 206 YSIGGKKINYFNVSRVPC-HVIQDSKD------SSKQYFIKSHILSGAFEAQEKDVEFKW 258
Query: 209 VTKDELMEYFPESAEF 224
+TK+EL E SAE+
Sbjct: 259 LTKEELGECL--SAEY 272
Score = 55 (24.4 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 1 MRRSLTSLVRPLTATRGFSTNSEKIVASVLFERLPVV---IPKIDPVVYAFQEFSFRWRQ 57
MR S V +T ST+S I ++++ RLP++ +PK D Y +Q + WR+
Sbjct: 1 MRGSTFHKVIRTYSTTPASTSSS-ISSTLVLSRLPIITPDVPKFDQQFYNYQ--TELWRR 57
>UNIPROTKB|E2R6F9 [details] [associations]
symbol:MRPL46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR015797
GO:GO:0005739 Gene3D:3.90.79.10 GO:GO:0016787 InterPro:IPR021757
Pfam:PF11788 CTD:26589 RefSeq:XP_536185.2 ProteinModelPortal:E2R6F9
Ensembl:ENSCAFT00000018235 GeneID:479035 KEGG:cfa:479035
NextBio:20854283 Uniprot:E2R6F9
Length = 280
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P RITE DK NDR SLQR LDR L L++ + G + +W P+ ++ E+L
Sbjct: 130 LQFKPGARITEADKKNDRTSLQRKLDRNLVLLVKEKL----GDQDVWMLPQAEWQPGETL 185
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSY--KQFFFKSQVIASNKF 198
R AE L ++ + F+GNAP GH + + + S K FFFK+ ++ +
Sbjct: 186 RGTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQALRTESSLGAKVFFFKALLLTGDFS 245
Query: 199 TIGKCEDFVWVTKDELMEY 217
K + VWV K+EL +Y
Sbjct: 246 QTSKKDHHVWVCKEELGDY 264
>UNIPROTKB|F6XH70 [details] [associations]
symbol:MRPL46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR015797 Gene3D:3.90.79.10 GO:GO:0016787
InterPro:IPR021757 Pfam:PF11788 OMA:GHHVWVT
GeneTree:ENSGT00390000015400 EMBL:AAEX03002316
Ensembl:ENSCAFT00000018235 Uniprot:F6XH70
Length = 299
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P RITE DK NDR SLQR LDR L L++ + G + +W P+ ++ E+L
Sbjct: 149 LQFKPGARITEADKKNDRTSLQRKLDRNLVLLVKEKL----GDQDVWMLPQAEWQPGETL 204
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSY--KQFFFKSQVIASNKF 198
R AE L ++ + F+GNAP GH + + + S K FFFK+ ++ +
Sbjct: 205 RGTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQALRTESSLGAKVFFFKALLLTGDFS 264
Query: 199 TIGKCEDFVWVTKDELMEY 217
K + VWV K+EL +Y
Sbjct: 265 QTSKKDHHVWVCKEELGDY 283
>UNIPROTKB|F1N499 [details] [associations]
symbol:MRPL46 "39S ribosomal protein L46, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR015797
GO:GO:0005739 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
InterPro:IPR021757 Pfam:PF11788 IPI:IPI00702931 UniGene:Bt.52114
GeneTree:ENSGT00390000015400 EMBL:DAAA02052093
Ensembl:ENSBTAT00000026420 OMA:HAWVTRH Uniprot:F1N499
Length = 277
Score = 179 (68.1 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 45/139 (32%), Positives = 73/139 (52%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P RIT+ D NDR SL R LDR L L++ + G + +W P+ ++ E+L
Sbjct: 127 LQFKPGARITDADVKNDRSSLHRKLDRNLILLVKDKL----GDQDVWMLPQAEWQPGETL 182
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ-P-AEKMPDVPSYKQFFFKSQVIASNKF 198
R+ AE L ++ + F+GNAP GH + P A + K FFFK+ ++ +
Sbjct: 183 RQTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQAVRAEGSLGAKIFFFKALLLTGDFS 242
Query: 199 TIGKCEDFVWVTKDELMEY 217
+ VW +K+EL +Y
Sbjct: 243 PAVEKGRHVWASKEELGDY 261
Score = 36 (17.7 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 4 SLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPV 44
SL S L A S + +++ ++ +R P+V ++ P+
Sbjct: 24 SLGSRSLTLAAAPSNSASPWRLLGALCLQRPPLVSKQLTPM 64
>UNIPROTKB|Q3SZ22 [details] [associations]
symbol:MRPL46 "39S ribosomal protein L46, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR015797 GO:GO:0005739
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0005840 GO:GO:0016787
InterPro:IPR021757 Pfam:PF11788 eggNOG:NOG256490 EMBL:BC103228
IPI:IPI00702931 RefSeq:NP_001029884.1 UniGene:Bt.52114
ProteinModelPortal:Q3SZ22 PRIDE:Q3SZ22 GeneID:540720
KEGG:bta:540720 CTD:26589 HOGENOM:HOG000047532 HOVERGEN:HBG057426
InParanoid:Q3SZ22 OrthoDB:EOG46MBKN NextBio:20878793 Uniprot:Q3SZ22
Length = 277
Score = 179 (68.1 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 45/139 (32%), Positives = 73/139 (52%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P RIT+ D NDR SL R LDR L L++ + G + +W P+ ++ E+L
Sbjct: 127 LQFKPGARITDADVKNDRSSLHRKLDRNLILLVKDKL----GDQDVWMLPQAEWQPGETL 182
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ-P-AEKMPDVPSYKQFFFKSQVIASNKF 198
R+ AE L ++ + F+GNAP GH + P A + K FFFK+ ++ +
Sbjct: 183 RQTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQAVRAEGSLGAKIFFFKALLLTGDFS 242
Query: 199 TIGKCEDFVWVTKDELMEY 217
+ VW +K+EL +Y
Sbjct: 243 PAVEKGRHVWASKEELGDY 261
Score = 36 (17.7 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 4 SLTSLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPV 44
SL S L A S + +++ ++ +R P+V ++ P+
Sbjct: 24 SLGSRSLTLAAAPSNSASPWRLLGALCLQRPPLVSKQLTPM 64
>UNIPROTKB|F1SRT0 [details] [associations]
symbol:LOC100523040 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR015797 GO:GO:0005739
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR021757
Pfam:PF11788 GeneTree:ENSGT00390000015400 OMA:HAWVTRH EMBL:FP102243
RefSeq:XP_003121908.1 UniGene:Ssc.17653 Ensembl:ENSSSCT00000005627
GeneID:100523040 KEGG:ssc:100523040 Uniprot:F1SRT0
Length = 279
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 48/132 (36%), Positives = 72/132 (54%)
Query: 88 RITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECA 147
R+TE DK +DR SL R LDR L L++ + G + IW P+ ++ E+LR+ AE
Sbjct: 136 RLTEADKKDDRTSLHRKLDRNLILLVREKL----GDQDIWMLPQSDWQPGETLRQTAERT 191
Query: 148 LQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSY--KQFFFKSQVIASNKFTIGKCED 205
L ++ + F+GNAP GH + + M S K FFFK+ ++ + GK
Sbjct: 192 LATLSENNMEAKFLGNAPCGHYKFKFPQAMRTETSLGAKVFFFKALLLTGDFSQAGKKGH 251
Query: 206 FVWVTKDELMEY 217
VWV+K+EL +Y
Sbjct: 252 HVWVSKEELGDY 263
>MGI|MGI:1914558 [details] [associations]
symbol:Mrpl46 "mitochondrial ribosomal protein L46"
species:10090 "Mus musculus" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005840 "ribosome" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR015797 MGI:MGI:1914558 GO:GO:0005739 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0005840 GO:GO:0016787 InterPro:IPR021757
Pfam:PF11788 eggNOG:NOG256490 CTD:26589 HOGENOM:HOG000047532
HOVERGEN:HBG057426 OrthoDB:EOG46MBKN OMA:GHHVWVT EMBL:AF217090
EMBL:BC061094 IPI:IPI00111211 RefSeq:NP_075820.1 UniGene:Mm.193181
ProteinModelPortal:Q9EQI8 SMR:Q9EQI8 STRING:Q9EQI8
PhosphoSite:Q9EQI8 PaxDb:Q9EQI8 PRIDE:Q9EQI8
Ensembl:ENSMUST00000032841 GeneID:67308 KEGG:mmu:67308
UCSC:uc009hxl.1 GeneTree:ENSGT00390000015400 InParanoid:Q9EQI8
NextBio:324194 Bgee:Q9EQI8 CleanEx:MM_MRPL46 Genevestigator:Q9EQI8
GermOnline:ENSMUSG00000030612 Uniprot:Q9EQI8
Length = 283
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 48/139 (34%), Positives = 73/139 (52%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P R TE DK NDR SL R LDR L L++ + G + +W P+ ++ E+L
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLVLLVREKL----GDQDVWMLPQVEWQPGETL 182
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ-P-AEKMPDVPSYKQFFFKSQVIASNKF 198
R AE L ++ + F+GNAP GH + P A + K FFFK+ ++ +
Sbjct: 183 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFV 242
Query: 199 TIGKCEDFVWVTKDELMEY 217
GK VW +K+EL +Y
Sbjct: 243 QAGKKSRHVWASKEELGDY 261
>RGD|1309123 [details] [associations]
symbol:Mrpl46 "mitochondrial ribosomal protein L46"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR015797 RGD:1309123
GO:GO:0005739 Gene3D:3.90.79.10 GO:GO:0005840 GO:GO:0016787
InterPro:IPR021757 Pfam:PF11788 eggNOG:NOG256490 CTD:26589
HOGENOM:HOG000047532 HOVERGEN:HBG057426 OrthoDB:EOG46MBKN
GeneTree:ENSGT00390000015400 EMBL:BC086407 IPI:IPI00950139
RefSeq:NP_001013086.1 UniGene:Rn.104883 ProteinModelPortal:Q5RK00
STRING:Q5RK00 PRIDE:Q5RK00 Ensembl:ENSRNOT00000067172 GeneID:293054
KEGG:rno:293054 UCSC:RGD:1309123 InParanoid:Q5RK00 NextBio:635269
ArrayExpress:Q5RK00 Genevestigator:Q5RK00 Uniprot:Q5RK00
Length = 277
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 48/139 (34%), Positives = 73/139 (52%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P R TE DK NDR SL R LDR L L++ + G + +W P+ ++ E+L
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLILLVREKL----GDQDLWMLPQVEWQPGETL 182
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ-P-AEKMPDVPSYKQFFFKSQVIASNKF 198
R AE L ++ + F+GNAP GH + P A + K FFFK+ ++ +
Sbjct: 183 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 242
Query: 199 TIGKCEDFVWVTKDELMEY 217
GK VW +K+EL +Y
Sbjct: 243 QTGKKGRHVWASKEELGDY 261
>UNIPROTKB|Q5RK00 [details] [associations]
symbol:Mrpl46 "39S ribosomal protein L46, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR015797 RGD:1309123 GO:GO:0005739
Gene3D:3.90.79.10 GO:GO:0005840 GO:GO:0016787 InterPro:IPR021757
Pfam:PF11788 eggNOG:NOG256490 CTD:26589 HOGENOM:HOG000047532
HOVERGEN:HBG057426 OrthoDB:EOG46MBKN GeneTree:ENSGT00390000015400
EMBL:BC086407 IPI:IPI00950139 RefSeq:NP_001013086.1
UniGene:Rn.104883 ProteinModelPortal:Q5RK00 STRING:Q5RK00
PRIDE:Q5RK00 Ensembl:ENSRNOT00000067172 GeneID:293054
KEGG:rno:293054 UCSC:RGD:1309123 InParanoid:Q5RK00 NextBio:635269
ArrayExpress:Q5RK00 Genevestigator:Q5RK00 Uniprot:Q5RK00
Length = 277
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 48/139 (34%), Positives = 73/139 (52%)
Query: 81 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESL 140
+++ P R TE DK NDR SL R LDR L L++ + G + +W P+ ++ E+L
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLILLVREKL----GDQDLWMLPQVEWQPGETL 182
Query: 141 RKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ-P-AEKMPDVPSYKQFFFKSQVIASNKF 198
R AE L ++ + F+GNAP GH + P A + K FFFK+ ++ +
Sbjct: 183 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 242
Query: 199 TIGKCEDFVWVTKDELMEY 217
GK VW +K+EL +Y
Sbjct: 243 QTGKKGRHVWASKEELGDY 261
>ASPGD|ASPL0000066251 [details] [associations]
symbol:AN10922 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] InterPro:IPR015797
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 EMBL:BN001304
OMA:RLMWTFP InterPro:IPR021757 Pfam:PF11788
EnsemblFungi:CADANIAT00000155 HOGENOM:HOG000168342 Uniprot:C8VCS3
Length = 338
Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 71 SNSRGKGDYQMEYVPAP--RITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWH 128
+N+ + + E +P P R+TE DK D KSL RAL R LYL++ + + W
Sbjct: 172 ANNTSQDTSKQEQIPRPHPRVTEADKKGDTKSLDRALQRTLYLLVQHK-------EGYWK 224
Query: 129 FPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPD------VPS 182
P S E+LR AE L+ G +T+ VG P+GH V + D +
Sbjct: 225 LPSSPVASGETLRSAAERTLEQSAGVNMNTFMVGYHPVGHYVYNSRKPKIDETTGATLAG 284
Query: 183 YKQFFFKSQVIASN---KFTIGKCEDFVWVTKDELMEY 217
K FF K +++A + +DF W+ K+E+ +Y
Sbjct: 285 EKTFFMKGRIMAGQADLSANVQNLKDFKWLAKEEIAKY 322
>WB|WBGene00021935 [details] [associations]
symbol:mrpl-46 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462 GO:GO:0008340
GO:GO:0040010 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
InterPro:IPR021757 Pfam:PF11788 OMA:GHHVWVT
GeneTree:ENSGT00390000015400 EMBL:FO081485 RefSeq:NP_499994.4
ProteinModelPortal:C0VXV6 SMR:C0VXV6 PaxDb:C0VXV6
EnsemblMetazoa:Y55F3BL.1 GeneID:190311 KEGG:cel:CELE_Y55F3BL.1
CTD:190311 WormBase:Y55F3BL.1 eggNOG:NOG293080 Uniprot:C0VXV6
Length = 265
Score = 125 (49.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 96 NDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQSVLG-D 154
N+ KS++R L R+L LI+ + G G W P+ + E+LR+ AE + + G D
Sbjct: 123 NELKSVERELQRKLVLIVK-QKLGEKGYSSPWILPQMKHRDGETLRQTAERCIGELSGTD 181
Query: 155 LSHTYFVGNAPMG---HMVMQPAEKMPDVPSYKQFFFKSQVIA-SNKFTIGKCE--DFVW 208
LS GNAP G H P + K FF+ + + +F + + D+ W
Sbjct: 182 LSAD-ISGNAPFGVFTHRYPTPISQKTGARGAKIFFYTANLSTIPTEFQVNPDDVTDYQW 240
Query: 209 VTKDELMEYFP 219
V ++E + P
Sbjct: 241 VNREEFWKTVP 251
Score = 57 (25.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 7 SLVRPLTATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQ 58
S++R L+A S +I ASV+ R PVV P + V F Q+
Sbjct: 4 SVLRRLSAASA-SPQKWEIFASVVLSRAPVVAPPMSEVESRFHRLQMAEEQE 54
>FB|FBgn0035272 [details] [associations]
symbol:mRpL46 "mitochondrial ribosomal protein L46"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0032543 "mitochondrial translation"
evidence=IC] InterPro:IPR000086 InterPro:IPR015797 Pfam:PF00293
PROSITE:PS51462 EMBL:AE014296 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 GO:GO:0005762 GO:GO:0003735 InterPro:IPR021757
Pfam:PF11788 eggNOG:NOG256490 CTD:26589 OMA:GHHVWVT
GeneTree:ENSGT00390000015400 EMBL:AY071006 RefSeq:NP_647661.1
UniGene:Dm.7655 SMR:Q9W086 IntAct:Q9W086 MINT:MINT-988683
STRING:Q9W086 EnsemblMetazoa:FBtr0072776 GeneID:38230
KEGG:dme:Dmel_CG13922 UCSC:CG13922-RA FlyBase:FBgn0035272
InParanoid:Q9W086 OrthoDB:EOG4VX0NC GenomeRNAi:38230 NextBio:807644
Uniprot:Q9W086
Length = 258
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 88 RITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECA 147
R T D+ N S R LD LYL++ + G + P+ E ES+R+ AE
Sbjct: 119 RTTPDDQANRTTSTDRCLDDTLYLLVQQKL----GQQEHLILPQGKREEGESMRQTAERV 174
Query: 148 LQSVLGDLSHTYFVGNAPMG-HMVMQPAEKMPDVPSYKQFFFKSQVIASNKFTIGKCEDF 206
L+ G F GNAP+G H P + + K FF+++ + S + + F
Sbjct: 175 LRESCGQELQVLFYGNAPVGFHKYKYPRNQRTETVGAKVFFYRAS-LRSGQVPENLTK-F 232
Query: 207 VWVTKDELMEYFPESA 222
W+ K+ L E +A
Sbjct: 233 EWLPKEALNEKLTNTA 248
>POMBASE|SPCC126.05c [details] [associations]
symbol:mrpl17 "mitochondrial ribosomal protein subunit
L17 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] PomBase:SPCC126.05c EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
PIR:T40909 RefSeq:NP_588448.1 STRING:O94398
EnsemblFungi:SPCC126.05c.1 GeneID:2539103 KEGG:spo:SPCC126.05c
eggNOG:NOG265222 OMA:RLMWTFP OrthoDB:EOG47H909 NextBio:20800275
InterPro:IPR021757 Pfam:PF11788 Uniprot:O94398
Length = 268
Score = 116 (45.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 88 RITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEK-VYESEESLRKCAEC 146
R+TE D ND +S R+LD+ LYL++ + + G W FP V SE++L +
Sbjct: 135 RVTEADTKNDERSTLRSLDKSLYLLV--KKSKSSG----WQFPNTPVTSSEKALHLLCQD 188
Query: 147 ALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSYKQFFFKSQVIASNKF-TIGKCED 205
L+++L + S T+ V P+ +++ ++ K F +++++ + D
Sbjct: 189 LLKNILDENSLTWLVARHPLA--LLKTEQE-------KTFLLRARLLNGLDVPNLQNVYD 239
Query: 206 FVWVTKDELMEYFPESAEFLNKMIIS 231
+VW T DEL S+ K I+S
Sbjct: 240 WVWCTYDELKNKLSPSSWDSVKNILS 265
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 1 MRRSLTSLVRPL---TATRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQ 57
+R S+ S +PL T +G S + ++ S + R P + + +Y + + W +
Sbjct: 22 VRNSIQSS-KPLSNSTPLKGCSVGTI-LIRSPILTRQP---SEFEKSIYKYN--AELWNE 74
Query: 58 QYRRRYPDEFLDKSNSRGKGDYQ 80
P EF K S G+ D+Q
Sbjct: 75 -LSDPLPAEFYFKKGSVGEKDWQ 96
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 231 231 0.00084 113 3 11 22 0.38 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 592 (63 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.40u 0.11s 19.51t Elapsed: 00:00:01
Total cpu time: 19.40u 0.11s 19.51t Elapsed: 00:00:01
Start: Sat May 11 09:44:04 2013 End: Sat May 11 09:44:05 2013