BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026894
         (231 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9QUK4|BIR1B_MOUSE Baculoviral IAP repeat-containing protein 1b OS=Mus musculus
           GN=Naip2 PE=1 SV=2
          Length = 1447

 Score = 32.0 bits (71), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query: 50  YDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNL 99
           + ++   PTV+  L  +V  K++L  +     Y+ +   ALLW+ C+  L
Sbjct: 842 HPSSKAAPTVVSHLLQLVDEKESLENMSENEDYMKLHPEALLWIECLRGL 891


>sp|Q86W33|TPRA1_HUMAN Transmembrane protein adipocyte-associated 1 OS=Homo sapiens
           GN=TPRA1 PE=1 SV=1
          Length = 373

 Score = 31.2 bits (69), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 50  YDAALVVPTVLFVLYLVVHAKKNLTKLCNGRSYIMISYYALLWLACVLNLAWCSLQ---- 105
           +D  L++P VLF+++L+        K+    S I I++Y L+++  ++ +A   +     
Sbjct: 46  WDLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVS 105

Query: 106 -GWQCSAGKEVAWNLLSLFTVAAVLYLEISLMAFLLQESYASGLETLARTFIIS 158
                +   ++ W +   F +A  L + I  +AF   ES +S    LA T ++S
Sbjct: 106 TSNAATVADKILWEITRFFLLAIELSVIILGLAFGHLESKSSIKRVLAITTVLS 159


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.329    0.141    0.449 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,357,347
Number of Sequences: 539616
Number of extensions: 3093927
Number of successful extensions: 8071
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 8058
Number of HSP's gapped (non-prelim): 24
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)