BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026895
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SL43|MSRA5_ARATH Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana
GN=MSRA5 PE=2 SV=1
Length = 254
Score = 326 bits (835), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/238 (65%), Positives = 188/238 (78%), Gaps = 17/238 (7%)
Query: 7 YLFFSVLHLLLLTDTALCIRFPDRVSTSINDELGRPLKAAVFALGSFWRSEAVFGCLNGV 66
+ FF + LL D + IR +++S ++ D RPLK+AVFALGSFWRSEA FGC+NGV
Sbjct: 19 FFFFLCVSLL---DKTVSIRISNQISDTVVDSPDRPLKSAVFALGSFWRSEAAFGCINGV 75
Query: 67 VRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCR-------- 118
VRT+ GYAGG+KTNPE+RNLGDHAESVQVEYDPR+I +RQLL+VFW+SHD R
Sbjct: 76 VRTSAGYAGGTKTNPEYRNLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPD 135
Query: 119 ------SIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKR 172
S IFTN TEE RLA+ SKEREQ+ ++SSIVTTQIQQL FY AEP+HQKFELK+
Sbjct: 136 VGNQYRSCIFTNSTEELRLASTSKEREQLNTRSSIVTTQIQQLGTFYRAEPDHQKFELKQ 195
Query: 173 NPFLIHLMGNLPQEELEKSNLAAKLNSYAAELCPPRIQKQIDAKIKDIIRKGWPILRD 230
+PFLI L+GN+ +EELE+S LA KLN YAAELCPPRIQK ID+++ +IIRKGWP+LRD
Sbjct: 196 HPFLIQLIGNMVEEELERSALATKLNGYAAELCPPRIQKHIDSRVNEIIRKGWPVLRD 253
>sp|Q5VPG8|MSRA5_ORYSJ Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp.
japonica GN=MSRA5 PE=2 SV=1
Length = 254
Score = 280 bits (715), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/197 (67%), Positives = 156/197 (79%), Gaps = 14/197 (7%)
Query: 48 FALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQL 107
FALGSFWRSEA FGCL GV+RT+VGYAGGSK PE+RNLGDHAE V+VEYDPR+I +++L
Sbjct: 57 FALGSFWRSEAAFGCLPGVIRTSVGYAGGSKARPEYRNLGDHAECVKVEYDPRLIQYKKL 116
Query: 108 LEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQ 153
LEVFW SHD RSIIFTNG+ E+RLA SKE+EQ K + S++TTQIQ
Sbjct: 117 LEVFWASHDPREVFGQGPDVGNQYRSIIFTNGSVEARLAGLSKEKEQAKDRRSVITTQIQ 176
Query: 154 QLVAFYPAEPEHQKFELKRNPFLIHLMGNLPQEELEKSNLAAKLNSYAAELCPPRIQKQI 213
+ AFYPAEPEHQKFELKR PFL+ L+GNLP+EEL S LAAKLN+YAAELC P Q +I
Sbjct: 177 PIGAFYPAEPEHQKFELKRKPFLLQLIGNLPEEELLTSTLAAKLNAYAAELCSPNTQNRI 236
Query: 214 DAKIKDIIRKGWPILRD 230
++KI +I +KGWPILRD
Sbjct: 237 NSKIDEIAKKGWPILRD 253
>sp|P08761|MSRA_DROME Peptide methionine sulfoxide reductase OS=Drosophila melanogaster
GN=Eip71CD PE=2 SV=2
Length = 246
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 11/167 (6%)
Query: 46 AVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFR 105
A F +G FW +E+++G GV+RTTVGYAGGS P +R +GDH E ++++YDP VI+F+
Sbjct: 42 ATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDPTVISFK 101
Query: 106 QLLEVFWTSHD----------CRSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQL 155
+LL++FW +H+ S+I + E+ ++A SK EQ + I+TT+I
Sbjct: 102 ELLDLFWNNHEYGLTTPIKRQYASLILYHDEEQKQVAHASKLEEQERRAPEIITTEIASK 161
Query: 156 VAFYPAEPEHQKFELKRNPFLIHLMGNLPQEELEKSNLAAKLNSYAA 202
FYPAE HQK+ L+ + L + NL + L+ S +A KLN Y A
Sbjct: 162 ENFYPAEAYHQKYRLQGHKDLASSL-NLSPKLLQTSYVATKLNGYLA 207
>sp|Q6LYY1|MSRA_METMP Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain S2 / LL) GN=msrA PE=3 SV=1
Length = 157
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 19/157 (12%)
Query: 41 RPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVE 96
+ +K VF +G FW +E VF +NGVV T VG+ GG+ NP + R H E V+++
Sbjct: 2 KNIKTTVFGMGCFWGAEEVFRKINGVVSTEVGFMGGTIKNPTYGQVCRGKSGHIEVVKID 61
Query: 97 YDPRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMK 142
YDP +I++ +LL++FW +H+ S IF E+ +A S E+ Q
Sbjct: 62 YDPEIISYDELLDLFWNNHNPTTPNKQGWDVGEQYSSYIFYFDDEQKLIAEKSLEKMQEN 121
Query: 143 SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHL 179
+ IVT I++ +FYPAE HQK+ +K+N +++
Sbjct: 122 TDLKIVTI-IEKAGSFYPAEEYHQKYFMKKNNSILNF 157
>sp|A9MEZ2|MSRA_SALAR Peptide methionine sulfoxide reductase MsrA OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrA PE=3
SV=1
Length = 212
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 86/163 (52%), Gaps = 23/163 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V+V YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRVVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+S A S+ER Q
Sbjct: 103 PAVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQSTAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLMGNL 183
+ +TT+I FY AE EHQ++ L +NP+ +G +
Sbjct: 163 DAGDERPITTEIAHATPFYYAEDEHQQY-LHKNPYGYCGVGGI 204
>sp|B4TT49|MSRA_SALSV Peptide methionine sulfoxide reductase MsrA OS=Salmonella
schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1
Length = 212
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL++FW +HD RS I+ E+S A S+ER Q
Sbjct: 103 PAVIRYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQSAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGNHRPITTEITHATPFYYAEDEHQQY-LHKNP 195
>sp|B2TZL3|MSRA_SHIB3 Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=msrA PE=3
SV=1
Length = 212
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E++F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7LMP0|MSRA_ESCF3 Peptide methionine sulfoxide reductase MsrA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=msrA PE=3 SV=1
Length = 212
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S+ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDSAARASRERFQAAMI 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+ VTT+I FY AE +HQ++ L +NP
Sbjct: 163 AANDDRPVTTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B5Z3H5|MSRA_ECO5E Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=msrA PE=3 SV=1
Length = 212
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q8XCG3|MSRA_ECO57 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O157:H7 GN=msrA PE=3 SV=3
Length = 212
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7UQN3|MSRA_ECO27 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B1LRA3|MSRA_ECOSM Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=msrA PE=3 SV=1
Length = 212
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 23/155 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNPF 175
++ +TT+I FY AE +HQ++ L +NP+
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNPY 196
>sp|Q8ZK71|MSRA_SALTY Peptide methionine sulfoxide reductase MsrA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=msrA PE=3 SV=1
Length = 212
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMT 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B4T3H1|MSRA_SALNS Peptide methionine sulfoxide reductase MsrA OS=Salmonella newport
(strain SL254) GN=msrA PE=3 SV=1
Length = 212
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMT 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5F3D4|MSRA_SALA4 Peptide methionine sulfoxide reductase MsrA OS=Salmonella agona
(strain SL483) GN=msrA PE=3 SV=1
Length = 212
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQAAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q551H3|MSRA_DICDI Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum
GN=msrA PE=3 SV=1
Length = 147
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDH----AESVQVEYD 98
+ A FA G FW E +F + GV +T VGY G+ NP +R + AE+V++EYD
Sbjct: 1 MTKATFAAGCFWSVELLFQRVAGVTKTRVGYTNGTVENPTYRQVCSGKTGCAEAVELEYD 60
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P + + QLL +FW+ HD RS I+ + E+ A SKE+EQ+K K
Sbjct: 61 PEKVTYNQLLGLFWSKHDPTTLNRQGNDVGTQYRSGIYYHNEEQKNEAIASKEKEQLKYK 120
Query: 145 SSIVTTQIQQLVAFYPAEPEHQKF 168
I +T+I FYPAE EHQ++
Sbjct: 121 DPI-STEILPAGVFYPAETEHQQY 143
>sp|Q8Z150|MSRA_SALTI Peptide methionine sulfoxide reductase MsrA OS=Salmonella typhi
GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5BKM8|MSRA_SALPK Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain AKU_12601) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|C0Q6H8|MSRA_SALPC Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
C (strain RKS4594) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q5PJ81|MSRA_SALPA Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B4TFF2|MSRA_SALHS Peptide methionine sulfoxide reductase MsrA OS=Salmonella
heidelberg (strain SL476) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5R9G7|MSRA_SALG2 Peptide methionine sulfoxide reductase MsrA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=msrA PE=3
SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5R0T7|MSRA_SALEP Peptide methionine sulfoxide reductase MsrA OS=Salmonella
enteritidis PT4 (strain P125109) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|B5FSB9|MSRA_SALDC Peptide methionine sulfoxide reductase MsrA OS=Salmonella dublin
(strain CT_02021853) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q57GH3|MSRA_SALCH Peptide methionine sulfoxide reductase MsrA OS=Salmonella
choleraesuis (strain SC-B67) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI + QLL+ FW +HD RS I+ E++ A S+ER Q
Sbjct: 103 PAVIRYEQLLQTFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASRERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|A9N540|MSRA_SALPB Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL++FW +HD RS I+ E++ A S ER Q
Sbjct: 103 PAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASCERFQSAMA 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDHRPITTEIAHATPFYYAEDEHQQY-LHKNP 195
>sp|Q0T9G6|MSRA_ECOL5 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHSTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B6I2D2|MSRA_ECOSE Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SE11) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDQGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q3YUC8|MSRA_SHISS Peptide methionine sulfoxide reductase MsrA OS=Shigella sonnei
(strain Ss046) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|P0A745|MSRA_SHIFL Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
GN=msrA PE=3 SV=2
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q0SXG5|MSRA_SHIF8 Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
serotype 5b (strain 8401) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|P0A744|MSRA_ECOLI Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12) GN=msrA PE=1 SV=2
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B1ISY2|MSRA_ECOLC Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|A8A7X5|MSRA_ECOHS Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O9:H4 (strain HS) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B1XDW8|MSRA_ECODH Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / DH10B) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|C4ZR95|MSRA_ECOBW Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7M9I1|MSRA_ECO8A Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O8
(strain IAI1) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7LCT1|MSRA_ECO55 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain 55989 / EAEC) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7MLN1|MSRA_ECO45 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|A7ZV98|MSRA_ECO24 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7NGF6|MSRA_ECOLU Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7MTA1|MSRA_ECO81 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O81
(strain ED1a) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|B7NUD2|MSRA_ECO7I Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|Q31TF9|MSRA_SHIBS Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 4 (strain Sb227) GN=msrA PE=3 SV=1
Length = 212
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQ---- 140
P VI++ QLL+VFW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 141 MKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
+TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRHITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|A7MM56|MSRA_CROS8 Peptide methionine sulfoxide reductase MsrA OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=msrA PE=3 SV=1
Length = 212
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V+V YD
Sbjct: 43 MEVALFAMGCFWGVERLFWALPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL+VFW +HD RS I+ E+ A S ER + +
Sbjct: 103 PNVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYPLTPEQEAAAQASLERFRAAME 162
Query: 145 SS----IVTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE EHQ++ L +NP
Sbjct: 163 AAGDYRHITTEIAPAKPFYYAEDEHQQY-LHKNP 195
>sp|A9AB97|MSRA_METM6 Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=msrA PE=3
SV=1
Length = 157
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 19/154 (12%)
Query: 44 KAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVEYDP 99
+ AVF +G FW +E +F +NGV+ T VG+ GG+ NP + R H E V + Y+P
Sbjct: 5 ETAVFGMGCFWSAEELFRKINGVISTEVGFMGGNIKNPTYGQVCRGRSGHIEVVNIIYNP 64
Query: 100 RVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSKS 145
+++ + LLE+FW +HD S IF E+ LA S E+ Q S+
Sbjct: 65 KILKYDDLLELFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQKLLAEKSFEKIQKNSEL 124
Query: 146 SIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHL 179
IVT I++ F+PAE HQK+ +K+N +++
Sbjct: 125 KIVTA-IRKASDFFPAEEYHQKYFMKKNNCILNF 157
>sp|Q8YXZ4|MSRA1_NOSS1 Peptide methionine sulfoxide reductase MsrA 1 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=msrA1 PE=3 SV=1
Length = 163
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 19/146 (13%)
Query: 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEY 97
P++ A F G FW EA F + GVV T+VGY GG NP + + + HAE VQ+EY
Sbjct: 11 PMEKATFGAGCFWGVEAAFRKVKGVVSTSVGYMGGHFPNPCYLDVLSRITGHAEVVQIEY 70
Query: 98 DPRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKS 143
DP+++++ LL VFW HD RS+IF + +++ A SK + Q+
Sbjct: 71 DPQLVSYEDLLAVFWDIHDPTTLNRQGPDKGEQYRSVIFFHNEQQAEAAQQSKAKVQVSG 130
Query: 144 KSSI-VTTQIQQLVAFYPAEPEHQKF 168
+ + + T+I+ +Y A EHQ++
Sbjct: 131 RFELDIVTEIKHKSEYYLATEEHQQY 156
>sp|Q328B8|MSRA_SHIDS Peptide methionine sulfoxide reductase MsrA OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=msrA PE=3 SV=1
Length = 212
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L V T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPSVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSK 144
P VI++ QLL++FW +HD RS I+ E+ A S ER Q
Sbjct: 103 PSVISYEQLLQIFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAML 162
Query: 145 SSI----VTTQIQQLVAFYPAEPEHQKFELKRNP 174
++ +TT+I FY AE +HQ++ L +NP
Sbjct: 163 AADDDRRITTEIANATPFYYAEDDHQQY-LHKNP 195
>sp|A8G8X6|MSRA_SERP5 Peptide methionine sulfoxide reductase MsrA OS=Serratia
proteamaculans (strain 568) GN=msrA PE=3 SV=1
Length = 213
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 25/155 (16%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
L+ A+FA+G FW E +F GV T GY+GG NP +R + H E V+V +D
Sbjct: 44 LEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFD 103
Query: 99 PRVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKER-----E 139
P++I+++QLL+VFW +HD RS I+T E+ A S +R E
Sbjct: 104 PKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAME 163
Query: 140 QMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNP 174
Q K +I TT++ + FY AE +HQ++ L +NP
Sbjct: 164 QAGDKRAI-TTEVAPALPFYYAEDDHQQY-LYKNP 196
>sp|A6VFD6|MSRA_METM7 Peptide methionine sulfoxide reductase MsrA OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=msrA PE=3
SV=1
Length = 157
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 19/154 (12%)
Query: 44 KAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEF----RNLGDHAESVQVEYDP 99
+ AVF +G FW +E +F ++GV+ T VGY GG+ NP + R H E V+V YD
Sbjct: 5 ETAVFGMGCFWSAEELFRHVDGVISTEVGYMGGNVKNPTYGQVCRGKSGHIEVVKVSYDS 64
Query: 100 RVINFRQLLEVFWTSHD--------------CRSIIFTNGTEESRLAAHSKEREQMKSKS 145
++I + LLE+FW +HD S IF E+ +A S E+ Q
Sbjct: 65 KIITYDDLLELFWKNHDPTTPNRQGWDVGEQYSSHIFYFTDEQRIVAEKSLEKMQCYMDL 124
Query: 146 SIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHL 179
IVT I++ F+PAE HQK+ +K+N +++
Sbjct: 125 KIVTA-IKKASDFFPAEEYHQKYFMKKNNCILNF 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,983,484
Number of Sequences: 539616
Number of extensions: 3112719
Number of successful extensions: 7779
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 6880
Number of HSP's gapped (non-prelim): 357
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)