Query 026895
Match_columns 231
No_of_seqs 217 out of 1298
Neff 5.1
Searched_HMMs 29240
Date Tue Mar 26 00:52:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwb_A Peptide methionine sulf 100.0 9.9E-62 3.4E-66 408.9 14.8 138 43-181 2-155 (168)
2 3bqh_A PILB, peptide methionin 100.0 5.6E-60 1.9E-64 405.7 12.4 139 42-182 1-157 (193)
3 1ff3_A Peptide methionine sulf 100.0 1.9E-59 6.7E-64 406.9 12.7 141 40-181 39-201 (211)
4 1fvg_A Peptide methionine sulf 100.0 3.3E-59 1.1E-63 402.4 11.7 138 40-178 40-198 (199)
5 1nwa_A Peptide methionine sulf 100.0 1.4E-58 4.9E-63 399.2 13.4 135 42-177 24-173 (203)
6 3pim_A Peptide methionine sulf 100.0 4.4E-59 1.5E-63 398.4 9.9 139 38-178 14-178 (187)
7 2j89_A Methionine sulfoxide re 100.0 1.3E-57 4.3E-62 404.2 13.0 135 39-175 90-242 (261)
8 3e0m_A Peptide methionine sulf 100.0 1.4E-56 4.9E-61 407.5 13.3 138 42-181 1-154 (313)
9 3dxs_X Copper-transporting ATP 96.1 0.0058 2E-07 41.5 3.9 47 50-111 14-60 (74)
10 1cpz_A Protein (COPZ); copper 95.7 0.02 6.7E-07 37.1 5.1 46 50-110 12-57 (68)
11 1osd_A MERP, hypothetical prot 95.6 0.02 6.7E-07 37.6 4.9 46 50-110 15-60 (72)
12 1p6t_A Potential copper-transp 95.4 0.017 5.7E-07 44.2 4.7 47 50-111 86-132 (151)
13 2l3m_A Copper-ION-binding prot 95.4 0.015 5E-07 38.3 3.8 46 50-110 17-62 (71)
14 2ldi_A Zinc-transporting ATPas 95.2 0.037 1.3E-06 35.7 5.1 46 50-110 15-60 (71)
15 1yjr_A Copper-transporting ATP 95.0 0.035 1.2E-06 36.7 4.8 46 50-110 16-61 (75)
16 1opz_A Potential copper-transp 95.0 0.038 1.3E-06 36.4 5.0 47 49-110 17-63 (76)
17 2qif_A Copper chaperone COPZ; 95.0 0.026 8.8E-07 36.0 4.0 46 50-110 14-59 (69)
18 2g9o_A Copper-transporting ATP 94.9 0.021 7.1E-07 40.8 3.6 46 50-110 15-60 (90)
19 1q8l_A Copper-transporting ATP 94.8 0.057 2E-06 37.4 5.5 46 50-110 21-66 (84)
20 3cjk_B Copper-transporting ATP 94.7 0.035 1.2E-06 37.0 4.2 46 50-110 14-59 (75)
21 1y3j_A Copper-transporting ATP 94.7 0.037 1.3E-06 37.3 4.2 46 50-110 15-60 (77)
22 2ofg_X Zinc-transporting ATPas 94.6 0.049 1.7E-06 40.6 5.2 46 50-110 20-65 (111)
23 1kvi_A Copper-transporting ATP 94.5 0.04 1.4E-06 37.2 4.0 46 50-110 20-65 (79)
24 1aw0_A Menkes copper-transport 94.4 0.026 9E-07 37.0 2.9 46 50-110 15-60 (72)
25 2ew9_A Copper-transporting ATP 94.3 0.023 7.9E-07 43.0 2.8 45 51-110 93-137 (149)
26 2xmw_A PACS-N, cation-transpor 94.3 0.043 1.5E-06 35.7 3.7 45 50-110 15-59 (71)
27 4a4j_A Pacszia, cation-transpo 93.8 0.069 2.4E-06 35.4 4.1 46 50-111 14-59 (69)
28 1yg0_A COP associated protein; 93.8 0.09 3.1E-06 33.6 4.5 45 50-110 13-57 (66)
29 2kt2_A Mercuric reductase; nme 93.7 0.074 2.5E-06 34.6 4.0 45 50-110 12-56 (69)
30 1jww_A Potential copper-transp 93.2 0.074 2.5E-06 35.6 3.4 46 50-110 15-60 (80)
31 2kkh_A Putative heavy metal tr 92.1 0.23 7.8E-06 35.2 5.0 46 50-110 28-73 (95)
32 2rop_A Copper-transporting ATP 91.9 0.17 5.9E-06 41.0 4.7 46 50-110 134-179 (202)
33 1fvq_A Copper-transporting ATP 91.7 0.16 5.4E-06 33.1 3.5 45 50-110 14-58 (72)
34 1mwy_A ZNTA; open-faced beta-s 91.3 0.33 1.1E-05 32.1 4.8 43 50-109 15-57 (73)
35 2rop_A Copper-transporting ATP 90.2 0.38 1.3E-05 38.9 5.1 46 50-110 32-77 (202)
36 2ew9_A Copper-transporting ATP 88.3 0.45 1.5E-05 35.7 4.0 46 50-110 16-61 (149)
37 2kwa_A Kinase A inhibitor; bac 87.4 0.23 7.7E-06 37.2 1.7 31 63-110 45-85 (101)
38 3j09_A COPA, copper-exporting 85.2 0.61 2.1E-05 46.0 4.0 49 50-113 14-62 (723)
39 3fry_A Probable copper-exporti 82.6 1.2 4.2E-05 29.9 3.6 41 50-110 17-57 (73)
40 1cc8_A Protein (metallochapero 81.8 1.4 4.9E-05 29.3 3.7 28 49-76 15-43 (73)
41 2phc_B Uncharacterized protein 80.2 1.8 6.3E-05 37.2 4.6 31 63-110 39-69 (225)
42 3iwl_A Copper transport protei 79.1 1.3 4.6E-05 29.3 2.7 42 51-111 14-55 (68)
43 1p6t_A Potential copper-transp 76.0 3.3 0.00011 31.0 4.5 46 50-110 18-63 (151)
44 1ans_A Neurotoxin III; NMR {An 72.4 0.93 3.2E-05 26.7 0.4 7 50-56 9-15 (27)
45 2kyz_A Heavy metal binding pro 72.1 1.1 3.9E-05 29.0 0.8 35 50-100 13-47 (67)
46 2crl_A Copper chaperone for su 70.7 3.4 0.00012 29.9 3.3 28 49-76 29-56 (98)
47 2aj0_A Probable cadmium-transp 70.5 1.8 6.2E-05 28.2 1.6 35 50-99 15-49 (71)
48 3oep_A Putative uncharacterize 67.7 5.1 0.00017 38.4 4.6 34 63-113 33-66 (494)
49 2k2p_A Uncharacterized protein 67.2 2.2 7.7E-05 30.0 1.6 27 50-76 34-60 (85)
50 2roe_A Heavy metal binding pro 65.1 3.4 0.00012 26.4 2.1 28 50-77 12-39 (66)
51 3va7_A KLLA0E08119P; carboxyla 64.7 5.6 0.00019 42.0 4.6 32 63-111 877-908 (1236)
52 3mml_B Allophanate hydrolase s 52.5 12 0.0004 32.3 3.8 32 62-111 53-84 (228)
53 2xmm_A SSR2857 protein, ATX1; 49.5 2.3 7.7E-05 26.5 -0.9 27 50-76 13-39 (64)
54 1b4u_A LIGA, LIGB, protocatech 48.7 8.5 0.00029 31.0 2.2 44 187-231 27-70 (139)
55 1qup_A Superoxide dismutase 1 39.1 37 0.0013 28.5 4.8 45 49-111 16-60 (222)
56 1xd7_A YWNA; structural genomi 32.9 13 0.00043 28.9 0.8 39 56-111 40-80 (145)
57 2f40_A Hypothetical protein PF 32.5 27 0.00093 26.3 2.5 23 87-109 42-64 (96)
58 1jk9_B CCS, copper chaperone f 25.6 70 0.0024 27.4 4.3 28 49-76 17-44 (249)
59 1ylf_A RRF2 family protein; st 23.6 21 0.00073 27.7 0.6 39 56-111 47-87 (149)
60 1ybx_A Conserved hypothetical 20.4 47 0.0016 26.7 2.1 58 68-140 67-130 (143)
No 1
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.9e-62 Score=408.92 Aligned_cols=138 Identities=36% Similarity=0.612 Sum_probs=129.5
Q ss_pred ccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHHHhccCC-----
Q 026895 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDC----- 117 (231)
Q Consensus 43 ~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~Ff~~hDP----- 117 (231)
.++|+||||||||+|++|++++||++|+|||+||+++||||++||+|+|+|+|+|||++|||++||++||++|||
T Consensus 2 te~A~fagGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~hDPT~~nr 81 (168)
T 4gwb_A 2 TKRAVLAGGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQIHDPTTKDR 81 (168)
T ss_dssp CEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTTE
T ss_pred ceEEEEEccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhhcCCcCcCC
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---------ceEEEeCChHHHHHHHHHHHHHHhh-cCCCceEEEEeeCCCcccCchhHhhhhhhcCCcce-eccC
Q 026895 118 ---------RSIIFTNGTEESRLAAHSKEREQMK-SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLI-HLMG 181 (231)
Q Consensus 118 ---------RS~If~~~~eq~~~A~~~~~~~~~~-~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~~~-~~~~ 181 (231)
||+|||+|++|+++|+.+++++++. .+.++|+|||+|+++||+||+|||||| +|||+.| |++.
T Consensus 82 Qg~D~G~QYRS~If~~~~~Q~~~a~~~~~~l~~~~~~~~~IvTei~p~~~Fy~AE~yHQ~Yl-~knP~~y~Ch~~ 155 (168)
T 4gwb_A 82 QGNDIGTSYRSAIYYVDDEQKRIAQETIADVEASGLWPGKVVTEVEPVRDFWEAEPEHQNYL-ERYPNGYTCHFP 155 (168)
T ss_dssp ETTEESGGGCEEEEESSHHHHHHHHHHHHHHHHHTCSSSCCCCEEEECCCEEECCGGGTTHH-HHSTTSCCCCCC
T ss_pred CCCCCCcCceEEEecCCHHHHHHHHHHHHHHHHcccCCCCEEEEEEecCCeeECHHHHHHHH-HhCCCCCccCcC
Confidence 9999999999999999998877654 467799999999999999999999995 7899865 6554
No 2
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=100.00 E-value=5.6e-60 Score=405.71 Aligned_cols=139 Identities=31% Similarity=0.494 Sum_probs=129.5
Q ss_pred CccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCcccc----CCceeEEEEEEcCCCCcHHHHHHHHHhccCC
Q 026895 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDC 117 (231)
Q Consensus 42 ~~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v----~gHaE~V~V~yDp~~iSy~~LL~~Ff~~hDP 117 (231)
++++|+||||||||+|+.|++++||++|+|||+||+++||||++| +||+|+|+|+|||++|||++||++||++|||
T Consensus 1 ~~~~a~fagGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~hDP 80 (193)
T 3bqh_A 1 NTRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP 80 (193)
T ss_dssp CEEEEEEEESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHHSCC
T ss_pred CccEEEEecCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCC
Confidence 368999999999999999999999999999999999999999999 4999999999999999999999999999999
Q ss_pred --------------ceEEEeCChHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhHhhhhhhcCCcceeccCC
Q 026895 118 --------------RSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLMGN 182 (231)
Q Consensus 118 --------------RS~If~~~~eq~~~A~~~~~~~~~~~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~~~~~~~~ 182 (231)
||+|||+|++|+++|+.++++++++ +.++|+|||+|+.+||+||+|||+|| +|||..||++..
T Consensus 81 T~~nrQG~D~G~QYRS~If~~~~~Q~~~A~~~~~~~~~~-~~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~knp~~Yc~~~~ 157 (193)
T 3bqh_A 81 TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQK-YQLPLVVENEPLKNFYDAEEYHQDYL-IKNPNGYCHIDI 157 (193)
T ss_dssp BGGGSSSCCTTCTTCEEEEESSHHHHHHHHHHHHHHHTT-CSSCBCCEEEECCCEEECCGGGTTHH-HHCTTCCC---C
T ss_pred CCCCCCCCCcCccceeeeecCCHHHHHHHHHHHHHHHHH-hCCCeEEEEecCCCeeEcHHHHHHHH-HhCCCCceeeec
Confidence 9999999999999999999988865 67899999999999999999999995 689999998853
No 3
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=100.00 E-value=1.9e-59 Score=406.93 Aligned_cols=141 Identities=40% Similarity=0.700 Sum_probs=131.6
Q ss_pred CCCccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccC----CceeEEEEEEcCCCCcHHHHHHHHHhcc
Q 026895 40 GRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTSH 115 (231)
Q Consensus 40 ~~~~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~----gHaE~V~V~yDp~~iSy~~LL~~Ff~~h 115 (231)
+.++++|+||||||||+|+.|++++||++|+|||+||+++||||++|| ||+|+|+|+|||++|||++||++||++|
T Consensus 39 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~h 118 (211)
T 1ff3_A 39 PDGMEIAIFAMGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENH 118 (211)
T ss_dssp CTTCEEEEEECSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHSS
T ss_pred CCCceEEEEecCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHhc
Confidence 467899999999999999999999999999999999999999999995 9999999999999999999999999999
Q ss_pred CC--------------ceEEEeCChHHHHHHHHHHHHHHhh----cCCCceEEEEeeCCCcccCchhHhhhhhhcCCcce
Q 026895 116 DC--------------RSIIFTNGTEESRLAAHSKEREQMK----SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLI 177 (231)
Q Consensus 116 DP--------------RS~If~~~~eq~~~A~~~~~~~~~~----~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~~~ 177 (231)
|| ||+|||+|++|+++|++++++++++ .+.++|+|||+|+.+||+||||||||| +|||..|
T Consensus 119 DPT~~nrQG~D~GtQYRSaIf~~~~eQ~~~A~~~~~~~q~~l~~~g~~~~IvTeI~p~~~Fy~AE~YHQ~Yl-~knP~~Y 197 (211)
T 1ff3_A 119 DPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYL-HKNPYGY 197 (211)
T ss_dssp CTTSSSEETTEESGGGCCEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEECCCCCEEECCGGGTTHH-HHSCCCC
T ss_pred CCcccCCCCCCcCccceeeeecCCHHHHHHHHHHHHHHHHHHhhcccCCceEEEEeeCCCceeChHHHHHHH-HHCCCCC
Confidence 99 9999999999999999988776653 356789999999999999999999995 7899988
Q ss_pred eccC
Q 026895 178 HLMG 181 (231)
Q Consensus 178 ~~~~ 181 (231)
|+++
T Consensus 198 c~~~ 201 (211)
T 1ff3_A 198 CGIG 201 (211)
T ss_dssp CCCC
T ss_pred cCcC
Confidence 8876
No 4
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=100.00 E-value=3.3e-59 Score=402.40 Aligned_cols=138 Identities=38% Similarity=0.620 Sum_probs=127.5
Q ss_pred CCCccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccC----CceeEEEEEEcCCCCcHHHHHHHHHhcc
Q 026895 40 GRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTSH 115 (231)
Q Consensus 40 ~~~~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~----gHaE~V~V~yDp~~iSy~~LL~~Ff~~h 115 (231)
+.++++|+||||||||+|+.|++++||++|+|||+||+++||||++|| ||+|+|+|+|||++|||++||++||++|
T Consensus 40 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~h 119 (199)
T 1fvg_A 40 PEGTQMAVFGMGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENH 119 (199)
T ss_dssp CTTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHTS
T ss_pred CCCceEEEEecCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhc
Confidence 457899999999999999999999999999999999999999999994 9999999999999999999999999999
Q ss_pred CC--------------ceEEEeCChHHHHHHHHHHHHHHhhc---CCCceEEEEeeCCCcccCchhHhhhhhhcCCccee
Q 026895 116 DC--------------RSIIFTNGTEESRLAAHSKEREQMKS---KSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIH 178 (231)
Q Consensus 116 DP--------------RS~If~~~~eq~~~A~~~~~~~~~~~---~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~~~~ 178 (231)
|| ||+|||+|++|+++|+.++++++++. ..++|+|||+|+++||+||||||||| +|||..||
T Consensus 120 DPT~~nrQG~D~G~QYRS~If~~~~~Q~~~A~~~~~~~q~~~~~~g~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~knP~~Yc 198 (199)
T 1fvg_A 120 DPTQGMRQGNDHGSQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQTFYYAEDYHQQYL-SKDPDGYC 198 (199)
T ss_dssp CTTCSSEETTEESGGGCEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCEECSSCCCEECCGGGTTHH-HHSTTCCC
T ss_pred CCcccCCCCCCCChhheeccccCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeeCCCeeECHHHHHHHH-HhCCCCCC
Confidence 99 99999999999999999888766531 12589999999999999999999995 78998665
No 5
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=100.00 E-value=1.4e-58 Score=399.19 Aligned_cols=135 Identities=36% Similarity=0.595 Sum_probs=126.7
Q ss_pred CccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHHHhccCC----
Q 026895 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDC---- 117 (231)
Q Consensus 42 ~~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~Ff~~hDP---- 117 (231)
.+++|+||||||||+|++|++++||++|+|||+||+++||||++.+.|+|+|+|+|||++|||++||++||++|||
T Consensus 24 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~~hDPT~~n 103 (203)
T 1nwa_A 24 SNQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKD 103 (203)
T ss_dssp CCEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTT
T ss_pred ccceEEEecCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHHhcCCcccC
Confidence 3689999999999999999999999999999999999999999943499999999999999999999999999999
Q ss_pred ----------ceEEEeCChHHHHHHHHHHHHHHhh-cCCCceEEEEeeCCCcccCchhHhhhhhhcCCcce
Q 026895 118 ----------RSIIFTNGTEESRLAAHSKEREQMK-SKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLI 177 (231)
Q Consensus 118 ----------RS~If~~~~eq~~~A~~~~~~~~~~-~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~~~ 177 (231)
||+|||+|++|+++|+.++++++++ .+.++|+|||+|+++||+||||||||| +|||+.|
T Consensus 104 rQG~D~GtQYRSaIfy~~~eQ~~~A~~~~~~lq~~g~~~~~IvTeI~p~~~Fy~AE~YHQ~Yl-~knP~~Y 173 (203)
T 1nwa_A 104 RQGNDRGTSYRSAIFYFDEQQKRIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYL-QRYPNGY 173 (203)
T ss_dssp EETTEESGGGCEEEEESSHHHHHHHHHHHHHHHHHCCSSSCCCCEEEECCCEEECCGGGTTHH-HHSTTSC
T ss_pred CCCCCCCccccccccCCCHHHHHHHHHHHHHHHHhcCcCCCeEEEEecCCCEEEChHHHHHHH-HhCCCCC
Confidence 9999999999999999999888765 467899999999999999999999995 6899855
No 6
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=100.00 E-value=4.4e-59 Score=398.38 Aligned_cols=139 Identities=33% Similarity=0.502 Sum_probs=125.6
Q ss_pred CCCCCccEEEEcCCcccchhhhhccC--CCeEEeeeeecCC--CCCC----CCccccC----CceeEEEEEEcCCCCcHH
Q 026895 38 ELGRPLKAAVFALGSFWRSEAVFGCL--NGVVRTTVGYAGG--SKTN----PEFRNLG----DHAESVQVEYDPRVINFR 105 (231)
Q Consensus 38 ~~~~~~~~a~fagGCFW~~Ea~F~~l--~GV~~t~vGYaGG--~~~n----PtY~~v~----gHaE~V~V~yDp~~iSy~ 105 (231)
..+.++++|+||||||||+|++|+++ +||++|+|||+|| +++| |||++|| ||+|+|+|+|||++|||+
T Consensus 14 ~~p~~~~~a~fagGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~ 93 (187)
T 3pim_A 14 YDPAKDKLITLACGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLR 93 (187)
T ss_dssp CCTTTCEEEEEESSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHH
T ss_pred cCCCCCcEEEEecCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHH
Confidence 34567899999999999999999999 9999999999999 9999 9999995 899999999999999999
Q ss_pred HHHHHHHhccCC--------------ceEEEeCChHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhHhhhhhh
Q 026895 106 QLLEVFWTSHDC--------------RSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELK 171 (231)
Q Consensus 106 ~LL~~Ff~~hDP--------------RS~If~~~~eq~~~A~~~~~~~~~~~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~ 171 (231)
+||++||++||| ||+|||+|++|+++|+.++++++++ +.++|+|||+|+++||+||||||||| +
T Consensus 94 ~LL~~Ff~~hDPT~~nrQG~D~G~QYRS~Ify~~~~Q~~~A~~~~~~l~~~-~~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~ 171 (187)
T 3pim_A 94 ELTDFFFRIHDPTTSNSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQPK-WGNKIATVIEPIKNFYDAEEYHQLYL-D 171 (187)
T ss_dssp HHHHHHTTSSCCBTTCC-----CGGGCCEEEESSHHHHHHHHHHHHHHGGG-GTTCBCCEEEEEEEEEEHHHHHHHHC-T
T ss_pred HHHHHHHHhcCCCcCCCCCCCcCcccceeeEeCCHHHHHHHHHHHHHHHHH-hCCCcEEEEeeCCCeeecHHHHHHHH-H
Confidence 999999999999 9999999999999999999988865 57899999999999999999999995 7
Q ss_pred cCCccee
Q 026895 172 RNPFLIH 178 (231)
Q Consensus 172 knP~~~~ 178 (231)
|||+.||
T Consensus 172 knP~~Yc 178 (187)
T 3pim_A 172 KNPQGYA 178 (187)
T ss_dssp TCTTCTT
T ss_pred HCCCCCC
Confidence 8998553
No 7
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=100.00 E-value=1.3e-57 Score=404.24 Aligned_cols=135 Identities=34% Similarity=0.563 Sum_probs=128.4
Q ss_pred CCCCccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccC----CceeEEEEEEcCCCCcHHHHHHHHHhc
Q 026895 39 LGRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTS 114 (231)
Q Consensus 39 ~~~~~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~----gHaE~V~V~yDp~~iSy~~LL~~Ff~~ 114 (231)
+..++++|+||||||||+|+.|++++||++|+|||+||+++||||++|| ||+|+|+|+|||++|||++||++||++
T Consensus 90 p~~~~e~a~fAgGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~ 169 (261)
T 2j89_A 90 PAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWAR 169 (261)
T ss_dssp CSTTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 3367899999999999999999999999999999999999999999996 899999999999999999999999999
Q ss_pred cCC--------------ceEEEeCChHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhHhhhhhhcCCc
Q 026895 115 HDC--------------RSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPF 175 (231)
Q Consensus 115 hDP--------------RS~If~~~~eq~~~A~~~~~~~~~~~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~ 175 (231)
||| ||+|||+|++|+++|++++++++++ +.++|+|||+|+.+||+||||||||| +|||.
T Consensus 170 hDPT~~nrQG~D~GtQYRSaIfy~~eeQ~~~Ae~s~~~~q~~-~~~~IvTEI~p~~~Fy~AEdYHQ~Yl-~Kn~~ 242 (261)
T 2j89_A 170 HDPTTLNRQGNDVGTQYRSGIYYYTPEQEKAAKESLERQQKL-LNRKIVTEILPAKKFYRAEEYHQQYL-AKGGR 242 (261)
T ss_dssp SCTTSTTEETTEESGGGCEEEEESSHHHHHHHHHHHHHHHTT-CSSCCCCEEEECCCEEECCGGGTTTT-TTTTT
T ss_pred cCCcccCCCCCCCCccccccccCCCHHHHHHHHHHHHHHHHh-cCCCcEEEEecCCCeeECHHHHHHHH-HHCCC
Confidence 999 9999999999999999999988865 56799999999999999999999995 68998
No 8
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.4e-56 Score=407.52 Aligned_cols=138 Identities=27% Similarity=0.447 Sum_probs=131.5
Q ss_pred CccEEEEcCCcccchhhhhccCCCeEEeeeeecCCCCCCCCcccc--CCceeEEEEEEcCCCCcHHHHHHHHHhccCC--
Q 026895 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GDHAESVQVEYDPRVINFRQLLEVFWTSHDC-- 117 (231)
Q Consensus 42 ~~~~a~fagGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v--~gHaE~V~V~yDp~~iSy~~LL~~Ff~~hDP-- 117 (231)
+|++|+||||||||+|++|++++||++|+|||+||+++||||++| +||+|+|+|+|||++|||++||++||++|||
T Consensus 1 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT~ 80 (313)
T 3e0m_A 1 HMAEIYLAGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRVIDPLS 80 (313)
T ss_dssp -CEEEEEECSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHHSCTTC
T ss_pred CccEEEEecCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhhcCCCc
Confidence 378999999999999999999999999999999999999999999 4999999999999999999999999999999
Q ss_pred ------------ceEEEeCChHHHHHHHHHHHHHHhhcCCCceEEEEeeCCCcccCchhHhhhhhhcCCcceeccC
Q 026895 118 ------------RSIIFTNGTEESRLAAHSKEREQMKSKSSIVTTQIQQLVAFYPAEPEHQKFELKRNPFLIHLMG 181 (231)
Q Consensus 118 ------------RS~If~~~~eq~~~A~~~~~~~~~~~~~~~IvTeI~pl~~Fy~AEdyHQ~Y~l~knP~~~~~~~ 181 (231)
||+|||+|++|+++|+.++++++.+ +.+||+|||+|+++||+||+|||||| +|||..||++.
T Consensus 81 ~nrQG~D~G~QYRS~Ify~~~~Q~~~a~~~~~~~~~~-~~~~IvTeI~p~~~Fy~AE~yHQ~Yl-~knP~~Yc~~~ 154 (313)
T 3e0m_A 81 INQQGNDRGRQYRTGIYYQDEADLPAIYTVVQEQERM-LGRKIAVEVEQLRHYILAEDYHQDYL-RKNPSGYCHID 154 (313)
T ss_dssp SSEETTEESGGGCCEEEESCGGGHHHHHHHHHHHHHH-HSSCCCCEEEECCCEEECCGGGTTHH-HHSTTCCCCSC
T ss_pred CCCcCCCCccccceeEecCCHHHHHHHHHHHHHHHHh-cCCCeEEEEeeccceeEcHHHHHHHH-HHCCCcceeee
Confidence 9999999999999999999888765 56799999999999999999999995 68999999987
No 9
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=96.06 E-value=0.0058 Score=41.55 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=40.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
++|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 14 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 60 (74)
T 3dxs_X 14 AACSNSVEAALMNVNGVFKASVALLQN---------------RADVVFDPNLVKEEDIKEEI 60 (74)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEGGGT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 478999999999999999999988755 67899999999999887653
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=95.67 E-value=0.02 Score=37.10 Aligned_cols=46 Identities=17% Similarity=0.249 Sum_probs=39.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-+.+|..+.+++||.++.+.+..| .+.|.|||..++.++|.+.
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 57 (68)
T 1cpz_A 12 NHCVARIEEAVGRISGVKKVKVQLKKE---------------KAVVKFDEANVQATEICQA 57 (68)
T ss_dssp SSHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999988755 5678999998988887764
No 11
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=95.57 E-value=0.02 Score=37.64 Aligned_cols=46 Identities=13% Similarity=0.199 Sum_probs=39.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 60 (72)
T 1osd_A 15 SACPITVKKAISKVEGVSKVDVTFETR---------------QAVVTFDDAKTSVQKLTKA 60 (72)
T ss_dssp TTHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEETTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999887755 5778999999988887764
No 12
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=95.45 E-value=0.017 Score=44.18 Aligned_cols=47 Identities=28% Similarity=0.391 Sum_probs=41.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
++|-|.+|..+.+++||.++.+-++.+ .+.|+|||..++.++|++..
T Consensus 86 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 132 (151)
T 1p6t_A 86 AACANRIEKRLNKIEGVANAPVNFALE---------------TVTVEYNPKEASVSDLKEAV 132 (151)
T ss_dssp SSHHHHHHHHHTTSSSEEECCEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 489999999999999999999988755 67899999999998888754
No 13
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=95.43 E-value=0.015 Score=38.27 Aligned_cols=46 Identities=28% Similarity=0.370 Sum_probs=39.3
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-+.+|..+.+++||.++.+.+..| .+.|.|||..++.++|.+.
T Consensus 17 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 62 (71)
T 2l3m_A 17 GHCVNAIESSVKELNGVEQVKVQLAEG---------------TVEVTIDSSVVTLKDIVAV 62 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 368899999999999999999988765 5678999999998888764
No 14
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=95.18 E-value=0.037 Score=35.71 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=38.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+..++||.++.+.+..+ .+.|.||+..++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 60 (71)
T 2ldi_A 15 AACASSIERALERLKGVAEASVTVATG---------------RLTVTYDPKQVSEITIQER 60 (71)
T ss_dssp SGGGHHHHTGGGGCSSEEEEEEETTTT---------------EEEEEECTTTCCTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 589999999999999999999887755 5668999988887777654
No 15
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=95.04 E-value=0.035 Score=36.68 Aligned_cols=46 Identities=20% Similarity=0.418 Sum_probs=38.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 16 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 61 (75)
T 1yjr_A 16 ASCVHKIESSLTKHRGILYCSVALATN---------------KAHIKYDPEIIGPRDIIHT 61 (75)
T ss_dssp TTHHHHHHHHHTTSTTEEEEEEETTTT---------------EEEEEECTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 489999999999999999999887755 5778999998887777654
No 16
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=95.04 E-value=0.038 Score=36.38 Aligned_cols=47 Identities=26% Similarity=0.259 Sum_probs=39.2
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 49 agGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
..+|-+.+|..+..++||.++.+.+..+ .+.|.|||..++.++|.+.
T Consensus 17 C~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 63 (76)
T 1opz_A 17 CAACAARIEKGLKRMPGVTDANVNLATE---------------TVNVIYDPAETGTAAIQEK 63 (76)
T ss_dssp STTHHHHHHHHHHTSTTEEEEEEEGGGT---------------EEEEEECTTTCCHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 3588999999999999999999887755 5678999998888877654
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=95.03 E-value=0.026 Score=36.02 Aligned_cols=46 Identities=22% Similarity=0.381 Sum_probs=38.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+..++||.++.+.+..| .+.|.|||..++.++|.+.
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 59 (69)
T 2qif_A 14 QHCVKAVETSVGELDGVSAVHVNLEAG---------------KVDVSFDADKVSVKDIADA 59 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 478899999999999999999887655 5678999998888877654
No 18
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=94.93 E-value=0.021 Score=40.85 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=38.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-|.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 15 ~~C~~~Ie~~L~~~~GV~~v~v~l~~~---------------~~~V~~~~~~~~~~~i~~~ 60 (90)
T 2g9o_A 15 KSCVSNIESTLSALQYVSSIVVSLENR---------------SAIVVYNASSVTPESLRKA 60 (90)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTTT---------------EEEEEECCSSCCTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC---------------EEEEEECCCCCCHHHHHHH
Confidence 379999999999999999999988755 6779999988887776654
No 19
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=94.76 E-value=0.057 Score=37.43 Aligned_cols=46 Identities=22% Similarity=0.337 Sum_probs=39.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 21 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 66 (84)
T 1q8l_A 21 HSCTSTIEGKIGKLQGVQRIKVSLDNQ---------------EATIVYQPHLISVEEMKKQ 66 (84)
T ss_dssp CSSCHHHHHHHHTCTTEEEEEECSTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 489999999999999999999877654 6778999998888877765
No 20
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=94.72 E-value=0.035 Score=36.97 Aligned_cols=46 Identities=26% Similarity=0.448 Sum_probs=39.2
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 59 (75)
T 3cjk_B 14 NSCVWTIEQQIGKVNGVHHIKVSLEEK---------------NATIIYDPKLQTPKTLQEA 59 (75)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 378999999999999999999888755 5778999998888877764
No 21
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=94.66 E-value=0.037 Score=37.28 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=38.5
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 60 (77)
T 1y3j_A 15 ASCVANIERNLRREEGIYSILVALMAG---------------KAEVRYNPAVIQPPMIAEF 60 (77)
T ss_dssp CSHHHHHHHHHTTSSSEEECCCBTTTT---------------BEEEEECTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 489999999999999999988876654 5678999998888777664
No 22
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=94.63 E-value=0.049 Score=40.64 Aligned_cols=46 Identities=26% Similarity=0.374 Sum_probs=39.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-|.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 20 ~~Ca~~Ie~~L~~~~GV~~v~v~~~~~---------------~~~V~~~~~~~~~~~i~~~ 65 (111)
T 2ofg_X 20 TSCKLKIEGSLERLKGVAEASVTVATG---------------RLTVTYDPKQVSEITIQER 65 (111)
T ss_dssp GGTHHHHHHHHTTSSSEEEEEEETTTT---------------EEEEEECTTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEECCCC---------------EEEEEECCCCCCHHHHHHH
Confidence 489999999999999999999988765 6779999998888777764
No 23
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=94.46 E-value=0.04 Score=37.17 Aligned_cols=46 Identities=26% Similarity=0.448 Sum_probs=39.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+.
T Consensus 20 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 65 (79)
T 1kvi_A 20 NSCVWTIEQQIGKVNGVHHIKVSLEEK---------------NATIIYDPKLQTPKTLQEA 65 (79)
T ss_dssp TTTHHHHHHHHHHSSSCCCEEEEGGGT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCCCCCHHHHHHH
Confidence 489999999999999999998887755 6778999998888777664
No 24
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=94.45 E-value=0.026 Score=37.00 Aligned_cols=46 Identities=26% Similarity=0.238 Sum_probs=38.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 60 (72)
T 1aw0_A 15 NSCVQSIEGVISKKPGVKSIRVSLANS---------------NGTVEYDPLLTSPETLRGA 60 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCCcCCHHHHHHH
Confidence 378999999999999999999887755 5678999998888877764
No 25
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=94.35 E-value=0.023 Score=43.02 Aligned_cols=45 Identities=22% Similarity=0.433 Sum_probs=39.7
Q ss_pred CcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 51 GSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 51 GCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
+|-|.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++.
T Consensus 93 ~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 137 (149)
T 2ew9_A 93 SCVHNIESKLTRTNGITYASVALATS---------------KALVKFDPEIIGPRDIIKI 137 (149)
T ss_dssp HHHHHHHHHHHHSSSCCEEEEETTTT---------------EEEEECCTTTSCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEEcCCC---------------EEEEEECCCCCCHHHHHHH
Confidence 78999999999999999999988755 6779999999999888765
No 26
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=94.28 E-value=0.043 Score=35.72 Aligned_cols=45 Identities=18% Similarity=0.143 Sum_probs=35.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-+.+|..+.+++||.++.+-+..+ .+.|.||+. ++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~-~~~~~i~~~ 59 (71)
T 2xmw_A 15 AACASSIERAIAKVPGVQSCQVNFALE---------------QAVVSYHGE-TTPQILTDA 59 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEC----CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCC-CCHHHHHHH
Confidence 478999999999999999999988755 567899987 787777664
No 27
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=93.83 E-value=0.069 Score=35.40 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=39.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
++|-|-+|..+.+++||.++.+-+..+ .+.|.| +..++.++|.+..
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~-~~~~~~~~i~~~i 59 (69)
T 4a4j_A 14 TSCASSIERAIAKVPGVQSCQVNFALE---------------QAVVSY-HGETTPQILTDAV 59 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEE-CTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEE-CCCCCHHHHHHHH
Confidence 478999999999999999999988755 567999 7889998888754
No 28
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=93.76 E-value=0.09 Score=33.58 Aligned_cols=45 Identities=24% Similarity=0.215 Sum_probs=36.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..| .+.|.||+.. +.++|.+.
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~-~~~~i~~~ 57 (66)
T 1yg0_A 13 NHCVDKIEKFVGEIEGVSFIDVSVEKK---------------SVVVEFDAPA-TQDLIKEA 57 (66)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEETTTT---------------EEEEEECTTC-CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcCCC---------------EEEEEECCCC-CHHHHHHH
Confidence 579999999999999999999877655 5678999875 77776654
No 29
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=93.72 E-value=0.074 Score=34.64 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=37.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.||+. ++.++|.+.
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~-~~~~~i~~~ 56 (69)
T 2kt2_A 12 DSCAAHVKEALEKVPGVQSALVSYPKG---------------TAQLAIVPG-TSPDALTAA 56 (69)
T ss_dssp THHHHHHHHHHHHSTTEEEEEEETTTT---------------EEEEEECTT-SCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC---------------EEEEEECCC-CCHHHHHHH
Confidence 478999999999999999999987765 566899987 677777665
No 30
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=93.15 E-value=0.074 Score=35.59 Aligned_cols=46 Identities=28% Similarity=0.399 Sum_probs=37.3
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
.+|-+.+|..+..++||.++.+-+..+ .+.|.|||..++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 60 (80)
T 1jww_A 15 AACANRIEKRLNKIEGVANAPVNFALE---------------TVTVEYNPKEASVSDLKEA 60 (80)
T ss_dssp HHHHHHHHHHHHTSTTEEECCCCSSSS---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 478899999999999999888776644 5678999988887776654
No 31
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=92.09 E-value=0.23 Score=35.25 Aligned_cols=46 Identities=22% Similarity=0.148 Sum_probs=38.1
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+..++||.++.+.+..+ .+.|.||+..++-++|.+.
T Consensus 28 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 73 (95)
T 2kkh_A 28 TSEVPIIENILKSLDGVKEYSVIVPSR---------------TVIVVHDSLLISPFQIAKA 73 (95)
T ss_dssp TTTHHHHHHHHHHSSSEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC---------------EEEEEECCCCCCHHHHHHH
Confidence 478999999999999999999887755 5678999988887777654
No 32
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=91.92 E-value=0.17 Score=41.00 Aligned_cols=46 Identities=28% Similarity=0.413 Sum_probs=39.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-|.+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++.
T Consensus 134 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 179 (202)
T 2rop_A 134 ASCVHSIEGMISQLEGVQQISVSLAEG---------------TATVLYNPAVISPEELRAA 179 (202)
T ss_dssp THHHHHHHHHGGGSSSEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEccCC---------------EEEEEECCCCCCHHHHHHH
Confidence 488999999999999999999988755 6778999999988887765
No 33
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=91.69 E-value=0.16 Score=33.07 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=36.5
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.|| ..++.++|.+.
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~-~~~~~~~i~~~ 58 (72)
T 1fvq_A 14 SACTNTINTQLRALKGVTKCDISLVTN---------------ECQVTYD-NEVTADSIKEI 58 (72)
T ss_dssp HHHHHHHHHHHHTSSSEEEECCBTTTT---------------EEEEEEC-TTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEEC-CCCCHHHHHHH
Confidence 368899999999999999988877654 5678899 77887777654
No 34
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=91.25 E-value=0.33 Score=32.06 Aligned_cols=43 Identities=21% Similarity=0.142 Sum_probs=34.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLE 109 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~ 109 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.||+. ..++|.+
T Consensus 15 ~~C~~~ie~~l~~~~gV~~~~v~~~~~---------------~~~v~~~~~--~~~~i~~ 57 (73)
T 1mwy_A 15 AACARKVENAVRQLAGVNQVQVLFATE---------------KLVVDADND--IRAQVES 57 (73)
T ss_dssp TTHHHHHHHHHHTSSSEEEEEEETTTT---------------EEEEEESSC--CHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCC--CHHHHHH
Confidence 589999999999999999999988765 566899984 3455544
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=90.22 E-value=0.38 Score=38.94 Aligned_cols=46 Identities=26% Similarity=0.297 Sum_probs=39.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-|.+|..+..++||.++.+-+..+ .+.|.||+..++.++|.+.
T Consensus 32 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 77 (202)
T 2rop_A 32 KSCVLNIEENIGQLLGVQSIQVSLENK---------------TAQVKYDPSCTSPVALQRA 77 (202)
T ss_dssp STHHHHHHHHTTSBTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHH
Confidence 478999999999999999999887755 5678999999998887765
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=88.28 E-value=0.45 Score=35.68 Aligned_cols=46 Identities=22% Similarity=0.327 Sum_probs=37.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
+||-+.+|..+.+++||.+..+-+..+ .+.|.|||..++.++|.+.
T Consensus 16 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 61 (149)
T 2ew9_A 16 ASCVSNIERNLQKEAGVLSVLVALMAG---------------KAEIKYDPEVIQPLEIAQF 61 (149)
T ss_dssp SSHHHHHHHHHHTTSSCCCEEEETTTT---------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC---------------EEEEEEcCCCCCHHHHHHH
Confidence 589999999999999999888877654 5668899988887776654
No 37
>2kwa_A Kinase A inhibitor; bacterial signal transduction, KIPI, histidine kinase inhibi bacillus subtilis, transferase inhibitor; NMR {Bacillus subtilis}
Probab=87.39 E-value=0.23 Score=37.20 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=26.9
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCC----------cHHHHHHH
Q 026895 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVI----------NFRQLLEV 110 (231)
Q Consensus 63 l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~i----------Sy~~LL~~ 110 (231)
++||+++++||. +|.|.|||..+ +++.|...
T Consensus 45 ~~Gv~EiVPa~~-----------------SllV~ydp~~i~~~~~~~~~~~~~~l~~~ 85 (101)
T 2kwa_A 45 FPGFIECIPAFT-----------------SLTVFYDMYEVYKHLPQGISSPFESVKRD 85 (101)
T ss_dssp CTTEEEEEECSS-----------------EEEEEECHHHHHTTCCTTCCSHHHHHHHH
T ss_pred CCCeEEeccCce-----------------EEEEEEcchHhcccccccccCCHHHHHHH
Confidence 799999999998 89999999988 78777653
No 38
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=85.25 E-value=0.61 Score=46.02 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=42.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHHHh
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~Ff~ 113 (231)
++|-|.+|..+.+++||.++.+-++.+ .+.|+|||..++.++|.+..=.
T Consensus 14 a~Ca~~Ie~~L~~~~GV~~v~Vnl~~~---------------~~~V~~d~~~~~~~~i~~ai~~ 62 (723)
T 3j09_A 14 AMCVKSIETAVGSLEGVEEVRVNLATE---------------TAFIRFDEKRIDFETIKRVIED 62 (723)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCceEEEEEcCCC---------------EEEEEeCCCcCCHHHHHHHHHh
Confidence 478999999999999999999988755 6789999999999999887644
No 39
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=82.62 E-value=1.2 Score=29.87 Aligned_cols=41 Identities=10% Similarity=0.084 Sum_probs=32.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++|-+-+|..+.+ +||.++.+-+. ...+.|+|| +.++|.+.
T Consensus 17 ~~C~~~ie~~l~~-~gv~~~~v~~~---------------~~~~~v~~~----~~~~i~~~ 57 (73)
T 3fry_A 17 HHCVARVKKALEE-AGAKVEKVDLN---------------EAVVAGNKE----DVDKYIKA 57 (73)
T ss_dssp GGGHHHHHHHHHH-TTCEEEEECSS---------------EEEEEEEGG----GHHHHHHH
T ss_pred HHHHHHHHHHhcc-CCcEEEEEEcc---------------CCEEEEEEC----CHHHHHHH
Confidence 4899999999999 99999998776 346788998 66666554
No 40
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=81.84 E-value=1.4 Score=29.30 Aligned_cols=28 Identities=14% Similarity=0.116 Sum_probs=25.0
Q ss_pred cCCcccchhhhhccCC-CeEEeeeeecCC
Q 026895 49 ALGSFWRSEAVFGCLN-GVVRTTVGYAGG 76 (231)
Q Consensus 49 agGCFW~~Ea~F~~l~-GV~~t~vGYaGG 76 (231)
-++|-+.+|..+.+++ ||.++.+-+..+
T Consensus 15 C~~C~~~ie~~l~~~~~GV~~~~v~~~~~ 43 (73)
T 1cc8_A 15 CSGCSGAVNKVLTKLEPDVSKIDISLEKQ 43 (73)
T ss_dssp SHHHHHHHHHHHHTTTTSEEEEEEETTTT
T ss_pred CHHHHHHHHHHHHhCCCCceEEEEECCCC
Confidence 4689999999999999 999999988766
No 41
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=80.17 E-value=1.8 Score=37.20 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=27.8
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 63 l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
++||++++.||. ++.|.|||.++++.+|++.
T Consensus 39 ~~gv~e~vP~~~-----------------sl~V~~dp~~~~~~~l~~~ 69 (225)
T 2phc_B 39 PEWLVELVPAYS-----------------SLLVIYDPLKASYEEVESY 69 (225)
T ss_dssp CTTEEEEEEETT-----------------EEEEEECTTTSCHHHHHHH
T ss_pred CCCeEEeeccce-----------------EEEEEEcCCcCCHHHHHHH
Confidence 799999999997 8999999999999887763
No 42
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=79.09 E-value=1.3 Score=29.34 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=32.8
Q ss_pred CcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 51 GSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 51 GCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
+|-+.+|..+.+++|| ++.+-+..+ .+.|+++ ++.++|++..
T Consensus 14 ~C~~~i~~~l~~~~gV-~v~v~~~~~---------------~~~v~~~---~~~~~i~~~i 55 (68)
T 3iwl_A 14 GCAEAVSRVLNKLGGV-KYDIDLPNK---------------KVCIESE---HSMDTLLATL 55 (68)
T ss_dssp HHHHHHHHHHHHHCSE-EEEEETTTT---------------EEEEEES---SCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCe-EEEEEcCCC---------------EEEEEec---CCHHHHHHHH
Confidence 7888899999999999 999988765 4556663 5677776654
No 43
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=76.03 E-value=3.3 Score=30.98 Aligned_cols=46 Identities=26% Similarity=0.261 Sum_probs=36.6
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHH
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~ 110 (231)
+||-+.+|..+..++||.+..+.+..+ .+.|.||+..++..++.+.
T Consensus 18 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 63 (151)
T 1p6t_A 18 AACAARIEKGLKRMPGVTDANVNLATE---------------TVNVIYDPAETGTAAIQEK 63 (151)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEEGGGT---------------EEEEEECTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC---------------EEEEEEcCCcCCHHHHHHH
Confidence 478889999999999999988877654 4557899888877766543
No 44
>1ans_A Neurotoxin III; NMR {Anemonia sulcata} SCOP: g.11.1.1
Probab=72.42 E-value=0.93 Score=26.70 Aligned_cols=7 Identities=29% Similarity=0.567 Sum_probs=6.1
Q ss_pred CCcccch
Q 026895 50 LGSFWRS 56 (231)
Q Consensus 50 gGCFW~~ 56 (231)
||||||-
T Consensus 9 ~gCpWGQ 15 (27)
T 1ans_A 9 GGCPWGQ 15 (27)
T ss_dssp TTCSSSC
T ss_pred cCCcccc
Confidence 8999994
No 45
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=72.07 E-value=1.1 Score=28.97 Aligned_cols=35 Identities=23% Similarity=0.102 Sum_probs=29.0
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCC
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPR 100 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~ 100 (231)
++|-+.+|..+.++ ||.++.+-+..| .+.|.||+.
T Consensus 13 ~~C~~~i~~~l~~~-gv~~~~v~~~~~---------------~~~v~~~~~ 47 (67)
T 2kyz_A 13 NHCKMRISKALEEL-GVKNYEVSVEEK---------------KVVVETENL 47 (67)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEETTTT---------------EEEEECSCH
T ss_pred HHHHHHHHHHHHHc-CCeEEEEECCCC---------------EEEEEECCH
Confidence 47999999999999 999999887755 566788874
No 46
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.72 E-value=3.4 Score=29.86 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=24.5
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCC
Q 026895 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (231)
Q Consensus 49 agGCFW~~Ea~F~~l~GV~~t~vGYaGG 76 (231)
-.+|-|.+|..+.+++||.++.+-+..+
T Consensus 29 C~~C~~~Ie~aL~~l~GV~~v~vdl~~~ 56 (98)
T 2crl_A 29 CQSCVDAVRKSLQGVAGVQDVEVHLEDQ 56 (98)
T ss_dssp SHHHHHHHHHTTTTCTTCCEEEEETTTT
T ss_pred CHHHHHHHHHHHHcCCCceEEEEECCCC
Confidence 4579999999999999999999987755
No 47
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=70.47 E-value=1.8 Score=28.17 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=28.7
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcC
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDP 99 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp 99 (231)
++|-+.+|..+.+++||.++.+-+..+ .+.|.+|+
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~ 49 (71)
T 2aj0_A 15 TNCAAKFERNVKEIEGVTEAIVNFGAS---------------KITVTGEA 49 (71)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEECCSSE---------------EEEEEESC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECCCC---------------EEEEEecC
Confidence 368999999999999999998877644 56677887
No 48
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=67.73 E-value=5.1 Score=38.39 Aligned_cols=34 Identities=26% Similarity=0.493 Sum_probs=29.8
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHHHh
Q 026895 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (231)
Q Consensus 63 l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~Ff~ 113 (231)
++||++++.+|. ++.|.|||.++++++|++..-.
T Consensus 33 ~~gv~e~vP~~~-----------------sllV~ydp~~~~~~~l~~~l~~ 66 (494)
T 3oep_A 33 PPGLLDAVPAYG-----------------VLYLEYDPRRLSRGRLLRLLKG 66 (494)
T ss_dssp CTTEEEEEEETT-----------------EEEEEECTTTSCHHHHHHHHHH
T ss_pred CCCcEEeecccc-----------------EEEEEecCCCCCHHHHHHHHHH
Confidence 699999999887 7899999999999999876543
No 49
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=67.16 E-value=2.2 Score=29.99 Aligned_cols=27 Identities=4% Similarity=-0.328 Sum_probs=23.8
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCC
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG 76 (231)
++|-+.+|..+.+++||.++.+-+..+
T Consensus 34 ~~C~~~Ie~aL~~~~GV~~v~v~l~~~ 60 (85)
T 2k2p_A 34 GHCAGVIKGAIEKTVPGAAVHADPASR 60 (85)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEETTTT
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCCC
Confidence 379999999999999999999887755
No 50
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=65.09 E-value=3.4 Score=26.37 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=23.9
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCCC
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGS 77 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG~ 77 (231)
++|-+.+|..+.+++||.++.+-+..+.
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~~ 39 (66)
T 2roe_A 12 NHCVMAVTKALKKVPGVEKVEVSLEKGE 39 (66)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEECSSSCB
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEeCCCE
Confidence 4789999999999999999888777653
No 51
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=64.67 E-value=5.6 Score=41.97 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=28.8
Q ss_pred CCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 63 l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
++||++++.||. ++.|.|||.++++.+|++..
T Consensus 877 ~~gv~e~vP~~~-----------------sl~v~~dp~~~~~~~l~~~l 908 (1236)
T 3va7_A 877 TVGIVEMSQGVR-----------------SVLIEFDGSKINQKALLKCL 908 (1236)
T ss_dssp CTTEEEEEECSS-----------------EEEEEECTTTSCHHHHHHHH
T ss_pred CCCeEEeeccce-----------------EEEEEECCCCCCHHHHHHHH
Confidence 799999999987 78999999999999888765
No 52
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=52.48 E-value=12 Score=32.29 Aligned_cols=32 Identities=19% Similarity=0.056 Sum_probs=26.1
Q ss_pred cCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 62 CLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 62 ~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
.++||++++.||. +|.|.|||..++. ++++..
T Consensus 53 ~~~gv~e~vP~~~-----------------SllV~ydp~~~~~-~~~~~l 84 (228)
T 3mml_B 53 ELLGVVDIVPAAR-----------------TVLVKLAGPRYQA-PTRQRL 84 (228)
T ss_dssp TCTTEEEEEECSS-----------------EEEEEESSGGGHH-HHHHHH
T ss_pred CCCCcEEeecccc-----------------EEEEEEcCccCCH-HHHHHH
Confidence 4699999999887 7899999999987 455543
No 53
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=49.54 E-value=2.3 Score=26.48 Aligned_cols=27 Identities=4% Similarity=-0.142 Sum_probs=23.4
Q ss_pred CCcccchhhhhccCCCeEEeeeeecCC
Q 026895 50 LGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (231)
Q Consensus 50 gGCFW~~Ea~F~~l~GV~~t~vGYaGG 76 (231)
++|-+.+|..+.+++||.++.+-+..+
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~ 39 (64)
T 2xmm_A 13 EACAEAVTKAVQNEDAQATVQVDLTSK 39 (64)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECTTTC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 478999999999999999998877655
No 54
>1b4u_A LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: a.88.1.1 PDB: 1bou_A
Probab=48.71 E-value=8.5 Score=31.05 Aligned_cols=44 Identities=14% Similarity=0.289 Sum_probs=35.5
Q ss_pred HHHhhHHHHHhhhhhhhcCChhHHHHHHHHHHHHHhcCCCCCCCC
Q 026895 187 ELEKSNLAAKLNSYAAELCPPRIQKQIDAKIKDIIRKGWPILRDE 231 (231)
Q Consensus 187 ~~~~S~~Aarln~y~~~~~~pk~~k~l~~~~~~~~~~~~~~~~~~ 231 (231)
+...|.-+=+||.+|...+.|.+..+|.+-=..++ +.|+|++.|
T Consensus 27 d~~~s~kgY~LNkf~~sL~~~~~RerF~aDpeA~l-~~~gLTeEE 70 (139)
T 1b4u_A 27 TAQRARKGYNLNQFAMSLMKAENRERFKADESAYL-DEWNLTPAA 70 (139)
T ss_dssp CHHHHHHTHHHHHHHHHTTSHHHHHHHHHCHHHHH-HTTTCCHHH
T ss_pred CHHHHHHhHHHHHHHHHHCCHHHHHHHHhCHHHHH-HHcCCCHHH
Confidence 45566777889999999999999998887655666 889998754
No 55
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=39.14 E-value=37 Score=28.51 Aligned_cols=45 Identities=9% Similarity=0.099 Sum_probs=34.8
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 49 agGCFW~~Ea~F~~l~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
-++|-+.+|..+.+++||.++.+-++.+ .+.|.++ ++.++|++..
T Consensus 16 C~~Ca~~IekaL~~l~GV~~v~Vnl~~~---------------~v~V~~~---~~~~~I~~aI 60 (222)
T 1qup_A 16 CENCVNDIKACLKNVPGINSLNFDIEQQ---------------IMSVESS---VAPSTIINTL 60 (222)
T ss_dssp STTHHHHHHHHHTTCTTEEEEEEETTTT---------------EEEEEES---SCHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeeEEEEEcCCC---------------EEEEecc---CCHHHHHHHH
Confidence 5789999999999999999999988755 4445543 5667776654
No 56
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=32.93 E-value=13 Score=28.90 Aligned_cols=39 Identities=15% Similarity=0.358 Sum_probs=31.3
Q ss_pred hhhhhccC--CCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 56 SEAVFGCL--NGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 56 ~Ea~F~~l--~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
++.++..| .|++.+.-| .||- +..=||+.||+.++++..
T Consensus 40 l~kIl~~L~~aGlv~s~rG-~GGy----------------~Lar~p~~Itl~dVi~av 80 (145)
T 1xd7_A 40 VRRMISLLKKADILTSRAG-VPGA----------------SLKKDPADISLLEVYRAV 80 (145)
T ss_dssp HHHHHHHHHHTTSEECCSS-SSSC----------------EESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHCCceEeecC-CCCc----------------eecCCHHHCCHHHHHHHH
Confidence 57778777 799999999 7774 366689999999998864
No 57
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=32.51 E-value=27 Score=26.27 Aligned_cols=23 Identities=26% Similarity=0.296 Sum_probs=20.3
Q ss_pred CCceeEEEEEEcCCCCcHHHHHH
Q 026895 87 GDHAESVQVEYDPRVINFRQLLE 109 (231)
Q Consensus 87 ~gHaE~V~V~yDp~~iSy~~LL~ 109 (231)
.|.+-.-.|.||+++++-++||+
T Consensus 42 NgYAk~g~ViFDe~kl~~e~lLe 64 (96)
T 2f40_A 42 NPYAKVAEVVIDDSKVNIEELKE 64 (96)
T ss_dssp CTTTTCCEEECCBCSCSHHHHHH
T ss_pred ccccccceEEECcccCCHHHHHH
Confidence 46777778999999999999998
No 58
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=25.57 E-value=70 Score=27.38 Aligned_cols=28 Identities=7% Similarity=0.005 Sum_probs=25.3
Q ss_pred cCCcccchhhhhccCCCeEEeeeeecCC
Q 026895 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (231)
Q Consensus 49 agGCFW~~Ea~F~~l~GV~~t~vGYaGG 76 (231)
-++|-+.+|..+.+++||.++.+-+..+
T Consensus 17 C~~Ca~~IekaL~~l~GV~~v~Vnl~~~ 44 (249)
T 1jk9_B 17 CENCVNDIKACLKNVPGINSLNFDIEQQ 44 (249)
T ss_dssp SSSHHHHHHHHHTTCTTEEEEEEETTTT
T ss_pred cHHHHHHHHHHHhccCCeeEEEEEcCCC
Confidence 5789999999999999999999988765
No 59
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=23.57 E-value=21 Score=27.67 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=27.4
Q ss_pred hhhhhccC--CCeEEeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCcHHHHHHHH
Q 026895 56 SEAVFGCL--NGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (231)
Q Consensus 56 ~Ea~F~~l--~GV~~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iSy~~LL~~F 111 (231)
++.++..| .|++.++-| .||- +..=||+.||..++++.+
T Consensus 47 l~kil~~L~~~Glv~s~rG-~GGy----------------~L~~~p~~Itl~dVi~a~ 87 (149)
T 1ylf_A 47 IRKIMSYLKQAGFVYVNRG-PGGA----------------GLLKDLHEITLLDVYHAV 87 (149)
T ss_dssp HHHHHHHHHHTTSEEEC----CCE----------------EESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEccC-CCce----------------EeCCChhhCcHHHHHHHH
Confidence 56677766 799999999 6663 355678999999988865
No 60
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=20.45 E-value=47 Score=26.66 Aligned_cols=58 Identities=12% Similarity=0.178 Sum_probs=35.0
Q ss_pred EeeeeecCCCCCCCCccccCCceeEEEEEEcCCCCc------HHHHHHHHHhccCCceEEEeCChHHHHHHHHHHHHHH
Q 026895 68 RTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVIN------FRQLLEVFWTSHDCRSIIFTNGTEESRLAAHSKEREQ 140 (231)
Q Consensus 68 ~t~vGYaGG~~~nPtY~~v~gHaE~V~V~yDp~~iS------y~~LL~~Ff~~hDPRS~If~~~~eq~~~A~~~~~~~~ 140 (231)
.+..|.+||..-.- .++|.-|++.|..||+.+. +++|+-.- .|+.++++.+...++..
T Consensus 67 ~eveg~sGgGlVkV---tvnG~~ev~~I~Idp~lldpeD~E~LeDLI~aA------------vNdA~~ka~e~~~e~M~ 130 (143)
T 1ybx_A 67 KTVEASAGGGAVTV---VATGRKDIKEITIKPEVVDPDDVEMLQDLILAA------------VNEALRKADEMVTAEIS 130 (143)
T ss_dssp CEEEEEETTTTEEE---EEETTCCEEEEEECGGGCCTTCHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCEEEE---EEecCceEEEEEECHHHcCCcCHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
Confidence 35567776632111 1248899999999999985 55555333 25666666555544443
Done!