Query 026899
Match_columns 231
No_of_seqs 283 out of 1677
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 14:16:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026899.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026899hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 2.2E-49 4.8E-54 350.9 14.7 164 68-231 69-237 (369)
2 PLN03158 methionine aminopepti 100.0 2.8E-41 6.1E-46 314.8 19.0 164 68-231 90-258 (396)
3 PRK12897 methionine aminopepti 100.0 3E-29 6.5E-34 219.8 15.6 124 108-231 2-125 (248)
4 COG0024 Map Methionine aminope 100.0 2.6E-29 5.6E-34 221.7 14.4 122 109-230 4-127 (255)
5 PRK12318 methionine aminopepti 100.0 2E-28 4.4E-33 220.2 16.6 123 108-230 41-165 (291)
6 TIGR00500 met_pdase_I methioni 100.0 4.2E-28 9.2E-33 211.5 15.7 122 109-230 2-123 (247)
7 PRK07281 methionine aminopepti 100.0 3.4E-28 7.3E-33 218.5 15.2 125 107-231 1-156 (286)
8 PRK12896 methionine aminopepti 100.0 1.2E-27 2.5E-32 209.2 15.2 125 106-230 6-130 (255)
9 COG0006 PepP Xaa-Pro aminopept 99.9 8.5E-28 1.8E-32 222.5 12.0 125 102-231 146-270 (384)
10 PRK05716 methionine aminopepti 99.9 7.4E-27 1.6E-31 203.8 15.1 124 108-231 3-126 (252)
11 PRK09795 aminopeptidase; Provi 99.9 1.5E-26 3.4E-31 212.7 13.1 122 104-230 121-247 (361)
12 PRK10879 proline aminopeptidas 99.9 1.8E-26 3.9E-31 217.9 13.7 123 104-231 167-290 (438)
13 TIGR02993 ectoine_eutD ectoine 99.9 5.5E-26 1.2E-30 211.5 11.2 128 102-230 150-277 (391)
14 PRK15173 peptidase; Provisiona 99.9 5.3E-25 1.1E-29 200.5 12.3 125 101-231 86-210 (323)
15 PRK14575 putative peptidase; P 99.9 9.1E-25 2E-29 204.4 13.0 126 100-231 168-293 (406)
16 cd01090 Creatinase Creatine am 99.9 3.1E-24 6.8E-29 186.4 13.9 116 116-231 1-117 (228)
17 cd01086 MetAP1 Methionine Amin 99.9 5E-24 1.1E-28 184.5 14.3 115 116-230 1-115 (238)
18 PRK14576 putative endopeptidas 99.9 3E-24 6.5E-29 200.9 13.1 123 103-231 170-292 (405)
19 cd01087 Prolidase Prolidase. E 99.9 7.8E-24 1.7E-28 184.2 13.8 110 116-231 1-111 (243)
20 PRK13607 proline dipeptidase; 99.9 8.7E-24 1.9E-28 200.1 12.1 122 103-231 154-276 (443)
21 cd01092 APP-like Similar to Pr 99.9 3.8E-23 8.2E-28 174.3 13.5 110 116-230 1-110 (208)
22 TIGR00495 crvDNA_42K 42K curve 99.9 1.2E-22 2.6E-27 189.5 14.6 122 108-230 11-145 (389)
23 cd01085 APP X-Prolyl Aminopept 99.9 3.7E-22 8.1E-27 173.3 11.9 108 118-230 6-118 (224)
24 PF00557 Peptidase_M24: Metall 99.9 6.9E-22 1.5E-26 167.2 11.9 108 117-230 1-109 (207)
25 cd01066 APP_MetAP A family inc 99.9 3.1E-21 6.7E-26 160.2 12.5 109 116-230 1-109 (207)
26 PTZ00053 methionine aminopepti 99.9 6.5E-21 1.4E-25 180.8 15.2 116 106-230 148-270 (470)
27 cd01089 PA2G4-like Related to 99.9 4.9E-21 1.1E-25 165.9 13.1 115 116-230 1-127 (228)
28 TIGR00501 met_pdase_II methion 99.8 4E-20 8.7E-25 166.7 13.6 107 113-230 2-111 (295)
29 PRK08671 methionine aminopepti 99.8 9.3E-20 2E-24 163.9 12.9 105 115-230 1-108 (291)
30 KOG2414 Putative Xaa-Pro amino 99.8 2.3E-20 5E-25 172.1 7.5 124 103-231 221-345 (488)
31 KOG2737 Putative metallopeptid 99.8 8.6E-20 1.9E-24 167.1 9.1 126 102-231 177-307 (492)
32 cd01088 MetAP2 Methionine Amin 99.8 6.6E-19 1.4E-23 158.4 12.7 104 116-230 1-107 (291)
33 cd01091 CDC68-like Related to 99.7 1.4E-17 3E-22 146.4 11.3 114 116-231 1-127 (243)
34 KOG2413 Xaa-Pro aminopeptidase 99.2 3E-11 6.6E-16 116.4 8.9 124 102-229 299-432 (606)
35 KOG2776 Metallopeptidase [Gene 99.2 7.6E-11 1.7E-15 107.8 9.4 112 109-222 14-134 (398)
36 KOG1189 Global transcriptional 98.8 2.2E-08 4.7E-13 98.9 9.1 132 94-230 121-264 (960)
37 KOG2775 Metallopeptidase [Gene 98.7 1.4E-07 3E-12 85.2 11.1 104 111-220 80-190 (397)
38 cd01066 APP_MetAP A family inc 97.9 0.00028 6.1E-09 58.1 11.9 102 117-220 102-204 (207)
39 COG5406 Nucleosome binding fac 97.8 5.5E-05 1.2E-09 74.3 7.1 129 99-230 159-305 (1001)
40 cd01092 APP-like Similar to Pr 97.7 0.00069 1.5E-08 56.8 11.3 96 117-219 103-204 (208)
41 PRK05716 methionine aminopepti 97.6 0.00095 2.1E-08 58.1 11.0 100 118-220 119-240 (252)
42 cd01086 MetAP1 Methionine Amin 97.5 0.0017 3.6E-08 56.1 11.7 101 117-220 108-230 (238)
43 PRK15173 peptidase; Provisiona 97.4 0.0018 3.8E-08 59.3 11.5 100 117-219 202-305 (323)
44 TIGR00500 met_pdase_I methioni 97.4 0.0022 4.7E-08 55.8 11.6 100 118-220 117-238 (247)
45 PRK14575 putative peptidase; P 97.4 0.0023 5E-08 60.3 11.6 100 118-220 286-389 (406)
46 cd01090 Creatinase Creatine am 97.4 0.0031 6.8E-08 54.8 11.6 101 117-220 109-220 (228)
47 PRK14576 putative endopeptidas 97.3 0.0034 7.4E-08 59.1 12.1 100 117-219 284-387 (405)
48 PRK09795 aminopeptidase; Provi 97.3 0.0046 1E-07 57.1 12.3 105 112-219 235-341 (361)
49 PRK12318 methionine aminopepti 97.3 0.0033 7.2E-08 56.8 11.0 88 117-207 158-248 (291)
50 TIGR02993 ectoine_eutD ectoine 97.2 0.0033 7.1E-08 58.9 11.1 99 117-219 270-373 (391)
51 PRK12897 methionine aminopepti 97.2 0.0031 6.8E-08 55.2 10.1 100 118-220 118-239 (248)
52 PRK08671 methionine aminopepti 97.2 0.0033 7.2E-08 56.7 10.2 95 118-219 102-205 (291)
53 cd01091 CDC68-like Related to 97.2 0.0046 9.9E-08 54.5 10.5 104 117-220 119-234 (243)
54 cd01088 MetAP2 Methionine Amin 97.1 0.004 8.6E-08 56.2 10.0 95 118-219 101-204 (291)
55 PRK12896 methionine aminopepti 97.1 0.0075 1.6E-07 52.6 11.2 100 118-220 124-246 (255)
56 cd01087 Prolidase Prolidase. E 97.0 0.0092 2E-07 51.8 10.8 103 117-220 103-235 (243)
57 PRK07281 methionine aminopepti 97.0 0.0073 1.6E-07 54.6 10.4 85 118-205 149-237 (286)
58 PF00557 Peptidase_M24: Metall 97.0 0.005 1.1E-07 51.8 8.7 98 119-219 104-206 (207)
59 PLN03158 methionine aminopepti 96.8 0.014 3.1E-07 55.2 11.1 84 119-205 252-339 (396)
60 cd01089 PA2G4-like Related to 96.8 0.014 3.1E-07 50.4 10.3 98 117-220 120-220 (228)
61 TIGR00501 met_pdase_II methion 96.8 0.0088 1.9E-07 54.2 9.1 93 119-218 106-207 (295)
62 COG0006 PepP Xaa-Pro aminopept 96.5 0.032 6.8E-07 51.9 11.2 101 118-220 263-367 (384)
63 COG0024 Map Methionine aminope 96.4 0.046 1E-06 48.8 10.8 89 117-206 120-210 (255)
64 TIGR00495 crvDNA_42K 42K curve 96.3 0.032 6.9E-07 52.6 10.1 100 117-217 138-247 (389)
65 PTZ00053 methionine aminopepti 96.1 0.045 9.6E-07 52.9 10.2 101 118-218 264-375 (470)
66 PRK10879 proline aminopeptidas 95.7 0.14 3.1E-06 48.8 11.6 101 118-219 283-410 (438)
67 cd01085 APP X-Prolyl Aminopept 94.4 0.69 1.5E-05 40.1 11.3 97 119-219 113-215 (224)
68 PRK13607 proline dipeptidase; 93.1 0.68 1.5E-05 44.4 9.6 89 119-207 270-391 (443)
69 KOG2738 Putative methionine am 87.0 3.7 7.9E-05 37.9 8.2 82 117-201 229-314 (369)
70 KOG1189 Global transcriptional 83.6 4.6 9.9E-05 41.4 7.8 102 118-223 258-371 (960)
71 cd01666 TGS_DRG_C TGS_DRG_C: 74.8 11 0.00025 27.3 5.7 52 137-199 21-73 (75)
72 COG5406 Nucleosome binding fac 73.8 12 0.00026 37.9 7.2 81 119-203 300-385 (1001)
73 PRK01490 tig trigger factor; P 57.2 42 0.00091 31.7 7.3 57 140-220 131-191 (435)
74 TIGR00115 tig trigger factor. 48.7 67 0.0014 30.0 7.1 57 140-220 119-180 (408)
75 cd04938 TGS_Obg-like TGS_Obg-l 47.1 36 0.00078 24.6 4.0 47 137-199 28-74 (76)
76 PF05184 SapB_1: Saposin-like 44.6 41 0.00088 20.4 3.5 34 122-155 3-36 (39)
77 PF03477 ATP-cone: ATP cone do 41.7 22 0.00048 25.7 2.2 36 124-159 39-74 (90)
78 PF04363 DUF496: Protein of un 36.8 1.4E+02 0.003 22.7 5.8 38 117-155 26-63 (95)
79 PF00254 FKBP_C: FKBP-type pep 36.8 1.5E+02 0.0032 21.2 6.0 41 188-228 2-51 (94)
80 KOG2413 Xaa-Pro aminopeptidase 36.1 1.1E+02 0.0024 30.8 6.6 81 119-207 428-519 (606)
81 COG0544 Tig FKBP-type peptidyl 35.6 78 0.0017 30.5 5.5 44 141-208 132-175 (441)
82 cd01669 TGS_Ygr210_C TGS_Ygr21 34.1 1.2E+02 0.0025 22.0 4.9 48 137-199 27-74 (76)
83 KOG2414 Putative Xaa-Pro amino 31.2 2.9E+02 0.0062 26.9 8.2 90 110-205 334-438 (488)
84 PRK05423 hypothetical protein; 30.1 74 0.0016 24.5 3.4 28 128-155 43-70 (104)
85 COG1163 DRG Predicted GTPase [ 29.8 1.3E+02 0.0028 28.4 5.6 49 138-199 311-362 (365)
86 PF10415 FumaraseC_C: Fumarase 28.8 76 0.0016 21.5 3.0 35 118-152 10-49 (55)
87 PRK15131 mannose-6-phosphate i 28.2 2.8E+02 0.0061 26.2 7.8 46 18-64 69-114 (389)
88 PRK00464 nrdR transcriptional 27.3 1.6E+02 0.0035 24.3 5.3 38 123-160 85-122 (154)
89 PF09506 Salt_tol_Pase: Glucos 26.4 2.6E+02 0.0055 26.5 6.9 107 112-219 98-254 (381)
90 KOG2776 Metallopeptidase [Gene 25.1 3.4E+02 0.0074 25.9 7.5 83 122-206 145-236 (398)
91 TIGR02399 salt_tol_Pase glucos 24.7 2.8E+02 0.006 26.3 6.8 95 112-207 104-234 (389)
92 COG4001 Predicted metal-bindin 22.6 2.2E+02 0.0047 21.8 4.7 40 118-159 53-92 (102)
93 TIGR03147 cyt_nit_nrfF cytochr 22.1 1.2E+02 0.0026 24.4 3.5 30 123-152 56-85 (126)
94 PF03701 UPF0181: Uncharacteri 21.1 1.7E+02 0.0037 19.9 3.5 30 128-157 15-44 (51)
95 PF14615 Rsa3: Ribosome-assemb 20.9 29 0.00063 23.1 -0.2 29 113-141 15-43 (47)
96 COG3001 Uncharacterized protei 20.5 1.7E+02 0.0038 26.5 4.5 40 190-230 201-240 (286)
97 PF04355 SmpA_OmlA: SmpA / Oml 20.3 73 0.0016 22.0 1.7 19 132-150 7-25 (71)
98 COG3140 Uncharacterized protei 20.1 1.4E+02 0.003 20.8 2.9 31 128-158 15-45 (60)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-49 Score=350.88 Aligned_cols=164 Identities=66% Similarity=1.077 Sum_probs=155.3
Q ss_pred CCCCccCCCcccCCCCCCCCCCCCCCCCccCCCC----CCCCC-CCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 026899 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----IGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (231)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~----~~~~~-~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvT 142 (231)
.|.++++||||++||++.||+||++|+|+.+|.+ +.... ...|++++||++||+||++++++++.+..+++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 4889999999999999999999999999999653 22332 467899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCC
Q 026899 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (231)
Q Consensus 143 e~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s 222 (231)
++|||+++|++++++|+|||||||.+||+++|+|+|+++|||+|+.|+||+|||||||++++++|||+|+++||+||+++
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd 228 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD 228 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC
Q 026899 223 DEARNLVKG 231 (231)
Q Consensus 223 ~e~~~l~e~ 231 (231)
++.++|+++
T Consensus 229 e~~k~LVkv 237 (369)
T KOG2738|consen 229 EKAKKLVKV 237 (369)
T ss_pred HHHHHHHHH
Confidence 999999863
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.8e-41 Score=314.77 Aligned_cols=164 Identities=52% Similarity=0.879 Sum_probs=156.7
Q ss_pred CCCCccCCCcccCCCCCCCCCCCCCCCCccCCCCC-----CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 026899 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI-----GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (231)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~~-----~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvT 142 (231)
.|+++++||||++||++.||+||++|+|+..+.+. .+.+.|+|||++||++||+||++++++++.+.+.++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 48899999999999999999999999999886542 3567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCC
Q 026899 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (231)
Q Consensus 143 e~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s 222 (231)
|.||+++++++++++|++|++++|.+||+++|+|.|+++|||+|++++|++||+|+||++++++||++|++|||+||+++
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~ 249 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVD 249 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC
Q 026899 223 DEARNLVKG 231 (231)
Q Consensus 223 ~e~~~l~e~ 231 (231)
+++++++++
T Consensus 250 ~e~~~l~e~ 258 (396)
T PLN03158 250 EASRQLVKC 258 (396)
T ss_pred HHHHHHHHH
Confidence 999999874
No 3
>PRK12897 methionine aminopeptidase; Reviewed
Probab=99.96 E-value=3e-29 Score=219.80 Aligned_cols=124 Identities=36% Similarity=0.621 Sum_probs=118.0
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC
Q 026899 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (231)
Q Consensus 108 R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~ 187 (231)
..|||++||++||+|+++++++++++.+.++||+||.||++.++..+.++|+.....+|.+|+.++|+|.|++.+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998765667789999999999999999999
Q ss_pred CCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
+++|++||+|.+|+++.++||++|++|||++|+++++++++|++
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~ 125 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLV 125 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999863
No 4
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=2.6e-29 Score=221.72 Aligned_cols=122 Identities=45% Similarity=0.837 Sum_probs=115.9
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC-
Q 026899 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 187 (231)
Q Consensus 109 ~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~- 187 (231)
.+|+++||++||+||+|+.++++.+.+.++||+|+.||+..+++++.++|++|++++|.+||..+|+|.|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCH-HHHHhhc
Q 026899 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-EARNLVK 230 (231)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~-e~~~l~e 230 (231)
+++|++||+|+||+|+.++||++|.++||.||+.++ ..++|.+
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~ 127 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLE 127 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHH
Confidence 678999999999999999999999999999997664 6666765
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=99.96 E-value=2e-28 Score=220.24 Aligned_cols=123 Identities=37% Similarity=0.703 Sum_probs=116.8
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCeeeecCCCcccccC
Q 026899 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGI 185 (231)
Q Consensus 108 R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~--gFp~~v~sg~n~~~~Hg~ 185 (231)
++|||++||++||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.++.++|. +|++++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 359999999999999999999999999999999999999999999999999988777774 599999999999999999
Q ss_pred CCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 186 P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
|++++|++||+|.+|+++.++||++|++|||++|+++++++++|+
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~ 165 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQ 165 (291)
T ss_pred CCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999986
No 6
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=99.96 E-value=4.2e-28 Score=211.48 Aligned_cols=122 Identities=50% Similarity=0.847 Sum_probs=117.3
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCC
Q 026899 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (231)
Q Consensus 109 ~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~ 188 (231)
+|||++||++||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+...+|.+|+.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999987766777899999999999999999999
Q ss_pred CCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 189 r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
++|++||+|++|+|+.|+||++|++|||++|+++++++++|+
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~ 123 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLE 123 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999986
No 7
>PRK07281 methionine aminopeptidase; Reviewed
Probab=99.96 E-value=3.4e-28 Score=218.48 Aligned_cols=125 Identities=23% Similarity=0.434 Sum_probs=117.5
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCC----CCCCCeeeecCCCccc
Q 026899 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECIC 182 (231)
Q Consensus 107 ~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y----~gFp~~v~sg~n~~~~ 182 (231)
|..|||++||++||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.++.+++ .+||+++|+|.|++++
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEecccccc
Confidence 457999999999999999999999999999999999999999999999999998877665 4699999999999999
Q ss_pred ccCCCCCCCCCCCEEEEEEcc---------------------------EECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 183 HGIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 183 Hg~P~~r~L~~GDiV~iDvg~---------------------------~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
|+.|++++|++||+|++|+++ .++||++|++|||++|+++++++++|++
T Consensus 81 H~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~ 156 (286)
T PRK07281 81 HAFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDV 156 (286)
T ss_pred CCCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999997 4899999999999999999999999873
No 8
>PRK12896 methionine aminopeptidase; Reviewed
Probab=99.95 E-value=1.2e-27 Score=209.23 Aligned_cols=125 Identities=48% Similarity=0.855 Sum_probs=119.0
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccC
Q 026899 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (231)
Q Consensus 106 ~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~ 185 (231)
+.++|||++||++||+|+++++++++.+.+.++||+||.||+..+.+.+.++|+.+++..|.+|+.++|+|.|...+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45689999999999999999999999999999999999999999999999999988777778899999999999999999
Q ss_pred CCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 186 P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
|++++|++||+|.+|+++.++||++|++|||++|+++++++++|+
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~ 130 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCR 130 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999876
No 9
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.95 E-value=8.5e-28 Score=222.49 Aligned_cols=125 Identities=28% Similarity=0.371 Sum_probs=118.5
Q ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcc
Q 026899 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (231)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~ 181 (231)
..+.++|+|||++||+.||+|+++++.++..+.+.+++|+||.||.+.++..+.+.|++. .+|+++|++|.|+++
T Consensus 146 ~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n~a~ 220 (384)
T COG0006 146 DLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGENAAL 220 (384)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEeccccccC
Confidence 346789999999999999999999999999999999999999999999999999999764 259999999999999
Q ss_pred cccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 182 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 182 ~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
+|+.|+++.+++||+|+||+|+.|+||++|+||||++|+++++++++|++
T Consensus 221 pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~ 270 (384)
T COG0006 221 PHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEA 270 (384)
T ss_pred cCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999863
No 10
>PRK05716 methionine aminopeptidase; Validated
Probab=99.95 E-value=7.4e-27 Score=203.79 Aligned_cols=124 Identities=53% Similarity=0.915 Sum_probs=117.6
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC
Q 026899 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (231)
Q Consensus 108 R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~ 187 (231)
..|||++||++||+|+++++++++.+.+.++||+||.||++.+.+.+.++|+.+.+.++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 57999999999999999999999999999999999999999999999999998776667788889999999999999999
Q ss_pred CCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
+++|++||+|.+|+++.++||++|++|||++|+++++++++|++
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~ 126 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEV 126 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999863
No 11
>PRK09795 aminopeptidase; Provisional
Probab=99.94 E-value=1.5e-26 Score=212.65 Aligned_cols=122 Identities=18% Similarity=0.314 Sum_probs=112.7
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccc
Q 026899 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (231)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~H 183 (231)
+..+|+|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.++|+++ .+|+++|++|.|++.||
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEeccccccC
Confidence 6789999999999999999999999999999999999999999999999999999876 36899999999999999
Q ss_pred cCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCC--CCHH---HHHhhc
Q 026899 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVK 230 (231)
Q Consensus 184 g~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~--~s~e---~~~l~e 230 (231)
+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~ 247 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQ 247 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999963 3433 567765
No 12
>PRK10879 proline aminopeptidase P II; Provisional
Probab=99.94 E-value=1.8e-26 Score=217.93 Aligned_cols=123 Identities=23% Similarity=0.352 Sum_probs=115.7
Q ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccc
Q 026899 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (231)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~H 183 (231)
+.++|+|||++||++||+|+++++.++.++.+.++||+||.||++.+...+.++|+.. .+|+++|++|.|++++|
T Consensus 167 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H 241 (438)
T PRK10879 167 VHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILH 241 (438)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCcccccc
Confidence 4468999999999999999999999999999999999999999999999999999863 24888999999999999
Q ss_pred cCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEc-CCCCHHHHHhhcC
Q 026899 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKG 231 (231)
Q Consensus 184 g~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~V-G~~s~e~~~l~e~ 231 (231)
+.|++++|++||+|++|+|+.++||++|+||||+| |+++++++++|++
T Consensus 242 ~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~ 290 (438)
T PRK10879 242 YTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDI 290 (438)
T ss_pred CCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999873
No 13
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.93 E-value=5.5e-26 Score=211.51 Aligned_cols=128 Identities=17% Similarity=0.173 Sum_probs=110.4
Q ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcc
Q 026899 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (231)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~ 181 (231)
+.+.++|+|||++||++||+|++|++.+++.+.+.++||+||.||++.+...... +.....-.|.+|.+++++|.|++.
T Consensus 150 ~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~~~~~g~~~~~~~~iv~sG~~~a~ 228 (391)
T TIGR02993 150 ALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR-GVDGFGGDYPAIVPLLPSGADASA 228 (391)
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh-cccCcCCCcCCcccccccCccccC
Confidence 3467899999999999999999999999999999999999999999888655332 111000012346678889999999
Q ss_pred cccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 182 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 182 ~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+|+.|++++|++||+|++|+++.|+||++|++|||++|+|+++++++|+
T Consensus 229 pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~ 277 (391)
T TIGR02993 229 PHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEK 277 (391)
T ss_pred CCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999886
No 14
>PRK15173 peptidase; Provisional
Probab=99.92 E-value=5.3e-25 Score=200.49 Aligned_cols=125 Identities=19% Similarity=0.292 Sum_probs=110.8
Q ss_pred CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc
Q 026899 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (231)
Q Consensus 101 ~~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~ 180 (231)
.+.+.++|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|... |..| .++.+|.+ .
T Consensus 86 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~-~ 159 (323)
T PRK15173 86 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-F 159 (323)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-C
Confidence 3457789999999999999999999999999999999999999999999988888876543 1223 46777776 5
Q ss_pred ccccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 181 ~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
.+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|++
T Consensus 160 ~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~ 210 (323)
T PRK15173 160 SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQT 210 (323)
T ss_pred ccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999873
No 15
>PRK14575 putative peptidase; Provisional
Probab=99.92 E-value=9.1e-25 Score=204.42 Aligned_cols=126 Identities=18% Similarity=0.235 Sum_probs=112.1
Q ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC
Q 026899 100 KPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE 179 (231)
Q Consensus 100 ~~~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~ 179 (231)
..+.+.++|+|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.+.|.... . +.+++.+|.+
T Consensus 168 ~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~-~~~~v~~G~~- 241 (406)
T PRK14575 168 SSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----S-RFHLISVGAD- 241 (406)
T ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----C-cCceEEECCC-
Confidence 334467899999999999999999999999999999999999999999999998888776531 1 2246777877
Q ss_pred cccccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 180 CICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 180 ~~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
..+|+.|++++|++||+|++|+|+.++||++|++|||++|+++++++++|++
T Consensus 242 ~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~ 293 (406)
T PRK14575 242 FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQT 293 (406)
T ss_pred cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999873
No 16
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=99.92 E-value=3.1e-24 Score=186.43 Aligned_cols=116 Identities=18% Similarity=0.205 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCeeeecCCCcccccCCCCCCCCCC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~-l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~G 194 (231)
|++||+|++|++++++++.+.++||+||.||++.+.+.+.++|+...+ ..|.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 2233344678999999999999999999999
Q ss_pred CEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 195 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 195 DiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
|+|++|+++.++||++|++|||++|+++++++++|++
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~ 117 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEA 117 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999873
No 17
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.91 E-value=5e-24 Score=184.51 Aligned_cols=115 Identities=58% Similarity=1.071 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GD 195 (231)
|++||+|+++++++++++.+.++||+||.||+..+.+.+.++|+.+...+|.+|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999887777888998999999999999999999999999
Q ss_pred EEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+|.+|+++.++||++|++|||++|+++++++++|+
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~ 115 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVE 115 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999886
No 18
>PRK14576 putative endopeptidase; Provisional
Probab=99.91 E-value=3e-24 Score=200.87 Aligned_cols=123 Identities=20% Similarity=0.258 Sum_probs=111.8
Q ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccc
Q 026899 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (231)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~ 182 (231)
.+.++|+|||++||+.||+|++++++++..+.+.++||+||.||++.++..+.+.|... +..| .+|++|.| +.+
T Consensus 170 ~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~~ 243 (405)
T PRK14576 170 LFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FSP 243 (405)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-ccC
Confidence 46789999999999999999999999999999999999999999999999999887542 1123 57888988 679
Q ss_pred ccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 183 Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|++
T Consensus 244 h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~ 292 (405)
T PRK14576 244 KIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDT 292 (405)
T ss_pred CCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998863
No 19
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=99.91 E-value=7.8e-24 Score=184.23 Aligned_cols=110 Identities=28% Similarity=0.420 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GD 195 (231)
|++||+|+++++++++++.+.++||+||.||++.++..+.++|+++ +|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3788999999999999999999999999
Q ss_pred EEEEEEccEECCEEeceeeEEEc-CCCCHHHHHhhcC
Q 026899 196 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKG 231 (231)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRTf~V-G~~s~e~~~l~e~ 231 (231)
+|++|+++.++||++|++|||++ |+++++++++|++
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~ 111 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEA 111 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHH
Confidence 99999999999999999999999 6999999999863
No 20
>PRK13607 proline dipeptidase; Provisional
Probab=99.90 E-value=8.7e-24 Score=200.07 Aligned_cols=122 Identities=17% Similarity=0.203 Sum_probs=106.3
Q ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccc
Q 026899 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (231)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~ 182 (231)
.+.++|+|||++||++||+|+++++++++.+.+.++||+||.||+..+.... ..|+.. .+|+++|++|.|++++
T Consensus 154 ~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~~ 227 (443)
T PRK13607 154 YLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAVL 227 (443)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceEe
Confidence 3567899999999999999999999999999999999999999997654322 222221 3588999999999999
Q ss_pred ccCCCCC-CCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 183 HGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 183 Hg~P~~r-~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
|+.|+++ ++++||+|++|+|+.++||++|+||||+ |+++++++++|++
T Consensus 228 H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~ 276 (443)
T PRK13607 228 HYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKD 276 (443)
T ss_pred cCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHH
Confidence 9999875 6899999999999999999999999999 8899999988863
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=99.90 E-value=3.8e-23 Score=174.31 Aligned_cols=110 Identities=29% Similarity=0.511 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GD 195 (231)
|++||+||++++.++..+.+.++||+||.||+..++..+.++|+++ .+|+++|++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 6899999999999999999999999999999999999999999874 25899999999999999999999999999
Q ss_pred EEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+|++|+++.++||++|++|||++|+++++++++++
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~ 110 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYE 110 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999886
No 22
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.89 E-value=1.2e-22 Score=189.50 Aligned_cols=122 Identities=22% Similarity=0.369 Sum_probs=105.7
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCeeeecCCCcccc
Q 026899 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNECICH 183 (231)
Q Consensus 108 R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l----~y~gFp~~v~sg~n~~~~H 183 (231)
-.+|+++||++||+|++|++++++.+.+.++||+|+.||+..+++++.+.++. ... ++.+|+..+|++.|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 36999999999999999999999999999999999999999999999987653 221 1445555567789999999
Q ss_pred cCC--C--CCCCCCCCEEEEEEccEECCEEeceeeEEEcCC-----CCHHHHHhhc
Q 026899 184 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVK 230 (231)
Q Consensus 184 g~P--~--~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~-----~s~e~~~l~e 230 (231)
|+| + ++.|++||+|+||+|+.++||++|++|||+||+ ++++++++++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~ 145 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIA 145 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHH
Confidence 999 2 489999999999999999999999999999995 4667777775
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=99.88 E-value=3.7e-22 Score=173.27 Aligned_cols=108 Identities=19% Similarity=0.147 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC---CCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pG--vTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~---~r~L~ 192 (231)
.||.+..+ .++++.+.+.++|| +||.||++.+++++.+.|.++. .+|+++||+|.|++++|++|+ +++|+
T Consensus 6 ~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l~ 80 (224)
T cd01085 6 HIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKIS 80 (224)
T ss_pred HHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCcccC
Confidence 45555555 58999999999999 9999999999988877665432 258999999999999999998 99999
Q ss_pred CCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+||+|++|+++.++||++|++|||++|+++++++++|+
T Consensus 81 ~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~ 118 (224)
T cd01085 81 PDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYT 118 (224)
T ss_pred CCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999886
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.87 E-value=6.9e-22 Score=167.18 Aligned_cols=108 Identities=33% Similarity=0.536 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~-~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GD 195 (231)
|+||+|+++++++++.+.+.++||+||.||...+.+. +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56677543 35888999999999999999999999999
Q ss_pred EEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+|.+|+++.++||++|++|||++| ++++++++++
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~ 109 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYE 109 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHH
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhh
Confidence 999999999999999999999999 9999999886
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.86 E-value=3.1e-21 Score=160.22 Aligned_cols=109 Identities=31% Similarity=0.564 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GD 195 (231)
|+.||+|+++++++++.+.+.++||+||.||...+.+.+.++|+.+ .|+.++.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999843 3778888998889999999999999999
Q ss_pred EEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+|++|+++.++||++|++|||++|+++++++++++
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~ 109 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYE 109 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHH
Confidence 99999999999999999999999999999999886
No 26
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.86 E-value=6.5e-21 Score=180.82 Aligned_cols=116 Identities=23% Similarity=0.303 Sum_probs=100.1
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC----CCCCCCCCCCCCCCeeeecCCCcc
Q 026899 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECI 181 (231)
Q Consensus 106 ~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~----Ga~ps~l~y~gFp~~v~sg~n~~~ 181 (231)
+.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..+++.+.+. |+... .+||+ |+|.|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g----~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG----WAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc----CCCCc--eeecCccc
Confidence 3345689999999999999999999999999999999999999988876554 54322 46887 55799999
Q ss_pred cccCCC---CCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 182 CHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 182 ~Hg~P~---~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+|++|+ +++|++||+|.||+|+.++||++|++|||++| ++++++++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~e 270 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQ 270 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHH
Confidence 999996 68899999999999999999999999999997 56666665
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.86 E-value=4.9e-21 Score=165.91 Aligned_cols=115 Identities=24% Similarity=0.483 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CCC-CCCCCCCCCeeeecCCCcccccCC----CC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPS-PLGYGGFPKSVCTSVNECICHGIP----DS 188 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga--~ps-~l~y~gFp~~v~sg~n~~~~Hg~P----~~ 188 (231)
+++||+|++|++++++.+.+.++||+||.||+..+++++.+... ++. ..++.+++..+|++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 36899999999999999999999999999999888888777432 221 122233333334557999999996 68
Q ss_pred CCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCH-----HHHHhhc
Q 026899 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVK 230 (231)
Q Consensus 189 r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~-----e~~~l~e 230 (231)
++|++||+|++|+|+.++||++|++|||++|++++ +++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~ 127 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIA 127 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHH
Confidence 89999999999999999999999999999999885 7878775
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.83 E-value=4e-20 Score=166.69 Aligned_cols=107 Identities=33% Similarity=0.513 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC---CC
Q 026899 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (231)
Q Consensus 113 ~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~---~r 189 (231)
-+||++||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.++ ||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 47999999999999999999999999999999999999999999999864 88765 478999999985 67
Q ss_pred CCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 190 ~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
.|++||+|++|+|+.++||++|++|||++|+. ++++++
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~~---~~~l~~ 111 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGDQ---YDNLVK 111 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCcH---HHHHHH
Confidence 89999999999999999999999999999964 445554
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.82 E-value=9.3e-20 Score=163.90 Aligned_cols=105 Identities=32% Similarity=0.544 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC---CCCC
Q 026899 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (231)
Q Consensus 115 EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~---~r~L 191 (231)
+|++||+|++|++++++.+.+.++||+||.||+..+++.+.+.|+.++ ||+.+ +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 77654 567788999986 6889
Q ss_pred CCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 192 ~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
++||+|.+|+|+.++||++|++|||++|. +++++++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~ 108 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLGG---KYEDLVE 108 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeCh---hHHHHHH
Confidence 99999999999999999999999999993 4555554
No 30
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.81 E-value=2.3e-20 Score=172.08 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=117.4
Q ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccc
Q 026899 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (231)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~ 182 (231)
.+.++|.|||+.|+++||+||.|+.+++-..+..-|++..|..+.+.++..++..|++- ..|++.|+.|.|+...
T Consensus 221 li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tI 295 (488)
T KOG2414|consen 221 LIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTI 295 (488)
T ss_pred HHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceE
Confidence 35688999999999999999999999999888889999999999999999999999975 3699999999999999
Q ss_pred ccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEc-CCCCHHHHHhhcC
Q 026899 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKG 231 (231)
Q Consensus 183 Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~V-G~~s~e~~~l~e~ 231 (231)
|+.-++..|.++|.|++|.|+.++||++|+||||.+ |..++.|+.|||+
T Consensus 296 HY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYea 345 (488)
T KOG2414|consen 296 HYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEA 345 (488)
T ss_pred EEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999984
No 31
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=99.80 E-value=8.6e-20 Score=167.07 Aligned_cols=126 Identities=15% Similarity=0.252 Sum_probs=116.6
Q ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcc
Q 026899 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (231)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~ 181 (231)
|.+.+.|.|||+.||+.||.|++|+++++.+++.+++||+.|.++...+.......|.-.. .+|..|+|+|.|.++
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 4577899999999999999999999999999999999999999999999988888876322 357889999999999
Q ss_pred ccc----CCCCCCCCCCCEEEEEEccEECCEEeceeeEEEc-CCCCHHHHHhhcC
Q 026899 182 CHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKG 231 (231)
Q Consensus 182 ~Hg----~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~V-G~~s~e~~~l~e~ 231 (231)
.|+ .|+++.+++||.+++|+|+.|.+|.+|+|++|.+ |+.+++|+.+|++
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYna 307 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNA 307 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHH
Confidence 998 8999999999999999999999999999999999 8999999999974
No 32
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.79 E-value=6.6e-19 Score=158.41 Aligned_cols=104 Identities=35% Similarity=0.574 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCC---CCCCC
Q 026899 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~---~r~L~ 192 (231)
+++||+|++|++++++++.+.++||+||.||++.+++.+.++|+.++ ||. ++|.|+..+|+.|. +++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 37899999999999999999999999999999999999999998754 775 46899999999986 38999
Q ss_pred CCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
+||+|.+|+|+.++||++|++|||++|+ +++++++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~e 107 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLE 107 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHH
Confidence 9999999999999999999999999995 4555554
No 33
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.74 E-value=1.4e-17 Score=146.44 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hcCCC--CCHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCCeeeecCCC-ccc
Q 026899 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 182 (231)
Q Consensus 116 Ie~mR~Aa~ia~~~l~~~~~-----~i~pG--vTe~EI~~~v~~~~~~~Ga~-----ps~l~y~gFp~~v~sg~n~-~~~ 182 (231)
++.||+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. +..+. .+|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999975555 89999 99999999999999988744 11111 3699999999999 899
Q ss_pred ccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhcC
Q 026899 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKG 231 (231)
Q Consensus 183 Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e~ 231 (231)
|+.++++.++.|++|.+|+|+.|+|||+|++|||++| ++++++++|++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~ 127 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNF 127 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHH
Confidence 9999999999999999999999999999999999998 79999999873
No 34
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.22 E-value=3e-11 Score=116.36 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=102.2
Q ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhh----cCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeee
Q 026899 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTL----VKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT 175 (231)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~----i~pG--vTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~s 175 (231)
+++..++++|.++|++.||.|----..|+.+.+.+ +.-| +||.+++..++++-..+..+-. .+|++|.++
T Consensus 299 Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s 374 (606)
T KOG2413|consen 299 SPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSS 374 (606)
T ss_pred CHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeecc
Confidence 45566789999999999999865555555555444 4556 8999999999988877665432 259999966
Q ss_pred -cCCCcccccCCC---CCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhh
Q 026899 176 -SVNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLV 229 (231)
Q Consensus 176 -g~n~~~~Hg~P~---~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~ 229 (231)
|+|.+++|+.|. ++.+.+..+.++|.|+.|.--.+|+|||+.+|+|++++++.|
T Consensus 375 ~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~y 432 (606)
T KOG2413|consen 375 VGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAY 432 (606)
T ss_pred CCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHH
Confidence 999999999986 468999999999999999888999999999999999999865
No 35
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.19 E-value=7.6e-11 Score=107.83 Aligned_cols=112 Identities=25% Similarity=0.484 Sum_probs=93.2
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCC--CCCCCCC-C--CCCCCeeeecCCCcccc
Q 026899 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPSPLG-Y--GGFPKSVCTSVNECICH 183 (231)
Q Consensus 109 ~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G--a~ps~l~-y--~gFp~~v~sg~n~~~~H 183 (231)
.|-++.-+.++|-|++|+..++..+.+.+.||.+..||+.....++.+.- .|..... + -.||+ |+++|.++||
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceeec
Confidence 56788899999999999999999999999999999999988887776542 1221111 1 23666 5679999999
Q ss_pred cCCC----CCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCC
Q 026899 184 GIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (231)
Q Consensus 184 g~P~----~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s 222 (231)
+.|- +..|++||+|.||+|+.+|||.+-.+.|++|+.++
T Consensus 92 ~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~ 134 (398)
T KOG2776|consen 92 FSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAP 134 (398)
T ss_pred cCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCC
Confidence 9883 57899999999999999999999999999998765
No 36
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=98.78 E-value=2.2e-08 Score=98.87 Aligned_cols=132 Identities=17% Similarity=0.221 Sum_probs=99.1
Q ss_pred CCccCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-----HhhhcCCC--CCHHHHHHHHHHHHHHCC----CCCC
Q 026899 94 PYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEY-----AGTLVKPG--ITTDEIDKAVHQMIIDNG----AYPS 162 (231)
Q Consensus 94 ~y~~~~~~~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~-----~~~~i~pG--vTe~EI~~~v~~~~~~~G----a~ps 162 (231)
.|...++.-.+..+.+||++.||+.||+|+.++...|.. +.++|..| +|...+...++.++.+.. ..|.
T Consensus 121 ~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~ 200 (960)
T KOG1189|consen 121 GFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPD 200 (960)
T ss_pred CCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCcc
Confidence 343444444577889999999999999999999999983 33445555 577777777777776643 3332
Q ss_pred CCCCCCCCCeeeecCCCc-ccccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 163 PLGYGGFPKSVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 163 ~l~y~gFp~~v~sg~n~~-~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
.+. ++||+++.+|.+-. -+....+++.| + +|+-.+|++|++||+.++|||+| .|+.++++.|+
T Consensus 201 ~~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~ 264 (960)
T KOG1189|consen 201 LLD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYE 264 (960)
T ss_pred ccc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHH
Confidence 222 57999999988743 33445677888 4 88889999999999999999999 68999988875
No 37
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=98.71 E-value=1.4e-07 Score=85.23 Aligned_cols=104 Identities=26% Similarity=0.409 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCCCCCCCCCCCCeeeecCCCcccccCC
Q 026899 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (231)
Q Consensus 111 Ks~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~----~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P 186 (231)
-..+...-+|+|+++.+++-.++.+.|+||||-.||++.++...+ +.|.... -+||+. .|.|.+..|++|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 345567789999999999999999999999999999999887544 4444322 368875 578999999999
Q ss_pred C---CCCCCCCCEEEEEEccEECCEEeceeeEEEcCC
Q 026899 187 D---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD 220 (231)
Q Consensus 187 ~---~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~ 220 (231)
+ ..+|+.+|+..||+|...+|-.-|++.|+.+.+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F~p 190 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAFNP 190 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEeeCc
Confidence 6 358999999999999999999999999999863
No 38
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.87 E-value=0.00028 Score=58.15 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCE
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDi 196 (231)
+.++++.+.+.++++.+.+.++||++..||..++.+.+.++|....... .+.+.+.....+.-.-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~--~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGH--RTGHGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCC--CCccccCcccCCCCCcCCCCCCCcCCCCE
Confidence 6788999999999999999999999999999999999999987421111 11112221111111001123679999999
Q ss_pred EEEEEccEEC-CEEeceeeEEEcCC
Q 026899 197 INIDVTVYLN-GYHGDTSATFFCGD 220 (231)
Q Consensus 197 V~iDvg~~~~-GY~aD~tRTf~VG~ 220 (231)
+.++.+.+.. ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999987 58888999999864
No 39
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=97.78 E-value=5.5e-05 Score=74.26 Aligned_cols=129 Identities=18% Similarity=0.230 Sum_probs=82.9
Q ss_pred CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhc----CCC--CCHHHHHHHHHHHHHH----------CCCCC-
Q 026899 99 QKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV----KPG--ITTDEIDKAVHQMIID----------NGAYP- 161 (231)
Q Consensus 99 ~~~~~~~~~R~VKs~~EIe~mR~Aa~ia~~~l~~~~~~i----~pG--vTe~EI~~~v~~~~~~----------~Ga~p- 161 (231)
++.--+..+-.+|+.+||+.+|.+.+.....|......+ ..+ +|...+...++..+-+ .|-..
T Consensus 159 DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~ 238 (1001)
T COG5406 159 DVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDL 238 (1001)
T ss_pred hhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccch
Confidence 333346678899999999999999999999888554432 111 3334443333332111 11000
Q ss_pred CCCCCCCCCCeeeecCCC-cccccCCCCCCCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 162 SPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 162 s~l~y~gFp~~v~sg~n~-~~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
..+. .+|.+++.+|..- ..+..+..++.| -||+|...+|.+|+|||+.++|||++ +|+.+|++-|+
T Consensus 239 d~le-w~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~ 305 (1001)
T COG5406 239 DQLE-WCYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYE 305 (1001)
T ss_pred hhhh-hhcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHH
Confidence 0111 2477788877642 233333344455 38899999999999999999999999 58888876554
No 40
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.67 E-value=0.00069 Score=56.81 Aligned_cols=96 Identities=23% Similarity=0.320 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccc----CC-CCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----IP-DSRAL 191 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg----~P-~~r~L 191 (231)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.++|..+. |+..++.|.. ...|- .+ ++.+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~------~~~~~Gh~iG-~~~~e~p~i~~~~~~~l 175 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEY------FIHRTGHGVG-LEVHEAPYISPGSDDVL 175 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCcccc------CCCCCccccC-cccCcCCCcCCCCCCCc
Confidence 4677899999999999999999999999999999999999987432 2221111111 01121 12 46789
Q ss_pred CCCCEEEEEEccEECCE-EeceeeEEEcC
Q 026899 192 EDGDTINIDVTVYLNGY-HGDTSATFFCG 219 (231)
Q Consensus 192 ~~GDiV~iDvg~~~~GY-~aD~tRTf~VG 219 (231)
++|.++.|+.+.+..|+ -.-+..|++|.
T Consensus 176 ~~gmv~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 176 EEGMVFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred CCCCEEEECCeEEecCCCEEEeeeEEEEC
Confidence 99999999998887554 33467888874
No 41
>PRK05716 methionine aminopeptidase; Validated
Probab=97.56 E-value=0.00095 Score=58.12 Aligned_cols=100 Identities=19% Similarity=0.228 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--cccc-CC-CCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~--~~Hg-~P-~~r~L~~ 193 (231)
..|++.+++.++.+.+.+.++||++-.||++++++.+.++|..+. .++.|+ .+....++. +.++ .+ ++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGH--GIGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCcccc--ccCCccCCCCccCcCCCCCCCCEecC
Confidence 467788889999999999999999999999999999999987542 223232 222222111 1111 22 3678999
Q ss_pred CCEEEEEEccEE------------------CCEEeceeeEEEcCC
Q 026899 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (231)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~tRTf~VG~ 220 (231)
|.++.|+.+.+. +++-.-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999988764 235566778888864
No 42
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.50 E-value=0.0017 Score=56.12 Aligned_cols=101 Identities=21% Similarity=0.258 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--cc-ccCCC-CCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--IC-HGIPD-SRALE 192 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~--~~-Hg~P~-~r~L~ 192 (231)
+.+|++.+.+.++.+.+.+.++||++-.|++.++.+.+.+.|... ..++.|+ .+.....+. +. +..++ +.+|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~-~~~~~GH--giG~~~~e~p~~~~~~~~~~~~~le 184 (238)
T cd01086 108 EEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSV-VREFGGH--GIGRKFHEEPQIPNYGRPGTGPKLK 184 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcce-ecCcccc--CCCCccccCCCcCCccCCCCCCEec
Confidence 346788889999999999999999999999999999999998753 2223222 222111111 11 22243 67899
Q ss_pred CCCEEEEEEccEE------------------CCEEeceeeEEEcCC
Q 026899 193 DGDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (231)
Q Consensus 193 ~GDiV~iDvg~~~------------------~GY~aD~tRTf~VG~ 220 (231)
+|.++.++.+.++ +.+-.-+..|++|.+
T Consensus 185 ~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte 230 (238)
T cd01086 185 PGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITE 230 (238)
T ss_pred CCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcC
Confidence 9999999998875 223445667888854
No 43
>PRK15173 peptidase; Provisional
Probab=97.43 E-value=0.0018 Score=59.32 Aligned_cols=100 Identities=13% Similarity=0.103 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCcccccC-CCCCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGI-PDSRALED 193 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~--sg~n~~~~Hg~-P~~r~L~~ 193 (231)
+..|++.+++.++++.+.+.++||++-.||+..+.+.+.+.|.......+.| +.+. .|.++. |... .++.+|++
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~G--HGiG~~lg~~E~-P~i~~~~~~~Le~ 278 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLG--HGNGVFLGLEES-PFVSTHATESFTS 278 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCC--CcCCCCCCcCCC-CCCCCCCCCccCC
Confidence 4567888999999999999999999999999999999999886432222222 2222 133321 1111 23578999
Q ss_pred CCEEEEEEccEECCE-EeceeeEEEcC
Q 026899 194 GDTINIDVTVYLNGY-HGDTSATFFCG 219 (231)
Q Consensus 194 GDiV~iDvg~~~~GY-~aD~tRTf~VG 219 (231)
|.++.|..+.+..|. -.-+..|++|.
T Consensus 279 GMV~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 279 GMVLSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred CCEEEECCEEEcCCCcEEEEeeEEEEc
Confidence 999999998875443 24578899885
No 44
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.43 E-value=0.0022 Score=55.84 Aligned_cols=100 Identities=19% Similarity=0.122 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--ccccC-C-CCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI-P-DSRALED 193 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~--~~Hg~-P-~~r~L~~ 193 (231)
.+|++.+++.++++.+.+.++||+|-.||+.++.+.+.+.|..+. .+|.|+ .+....++. ++.+. + ++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 467788888999999999999999999999999999999986542 223222 222222221 12111 1 3678999
Q ss_pred CCEEEEEEccEE------------------CCEEeceeeEEEcCC
Q 026899 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (231)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~tRTf~VG~ 220 (231)
|.++.|+.+.+. +++-.-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988775 234555777888853
No 45
>PRK14575 putative peptidase; Provisional
Probab=97.36 E-value=0.0023 Score=60.30 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCcccccC-CCCCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGI-PDSRALEDG 194 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~--sg~n~~~~Hg~-P~~r~L~~G 194 (231)
..|++.+++.++++.+.+.++||++-.||++.+.+.+.+.|.......+ +.+.+. .|.++. +... -++.+|++|
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~-P~i~~~~~~~Le~G 362 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEES-PFVSTHATESFTSG 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccC-CCCCCCCCCCcCCC
Confidence 4677888999999999999999999999999999999998864322222 122222 233221 1111 235789999
Q ss_pred CEEEEEEccEECCE-EeceeeEEEcCC
Q 026899 195 DTINIDVTVYLNGY-HGDTSATFFCGD 220 (231)
Q Consensus 195 DiV~iDvg~~~~GY-~aD~tRTf~VG~ 220 (231)
.++.+..+.+..|. -.-+..|++|.+
T Consensus 363 Mv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 363 MVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 99999998886553 356789999853
No 46
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=97.35 E-value=0.0031 Score=54.75 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccc----C--CCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----I--PDSRA 190 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg----~--P~~r~ 190 (231)
+..|++.+++.++++.+.+.++||++-.||++++.+.+.++|...... .++.+.+....++. +|+ + -++.+
T Consensus 109 ~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~ 185 (228)
T cd01090 109 DAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTV 185 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCc
Confidence 347788999999999999999999999999999999999998643211 11222332222222 221 1 13588
Q ss_pred CCCCCEEEEEEccEEC----CE-EeceeeEEEcCC
Q 026899 191 LEDGDTINIDVTVYLN----GY-HGDTSATFFCGD 220 (231)
Q Consensus 191 L~~GDiV~iDvg~~~~----GY-~aD~tRTf~VG~ 220 (231)
|++|.++.++.+.++. |. -.-+..|++|.+
T Consensus 186 Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 186 LEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred cCCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 9999999999998863 22 223788888864
No 47
>PRK14576 putative endopeptidase; Provisional
Probab=97.30 E-value=0.0034 Score=59.13 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCcccccCC-CCCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALED 193 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~--sg~n~~~~Hg~P-~~r~L~~ 193 (231)
+..+++.+++.++++.+.+.+|||++-.||+.++.+.+.+.|......++.| +.+. .|.++ .+.-.+ ++.+|++
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~G--HgiG~~l~~~e-~P~i~~~~~~~Le~ 360 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLG--HGDGVFLGLEE-VPFVSTQATETFCP 360 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCC--CCCCCCCCcCc-CCCcCCCCCCccCC
Confidence 4567788899999999999999999999999999999999886432222222 2222 23332 222223 3678999
Q ss_pred CCEEEEEEccEECC-EEeceeeEEEcC
Q 026899 194 GDTINIDVTVYLNG-YHGDTSATFFCG 219 (231)
Q Consensus 194 GDiV~iDvg~~~~G-Y~aD~tRTf~VG 219 (231)
|.++.++.+.+..| .-.-+..|++|.
T Consensus 361 GMv~~vEp~~y~~g~ggvriEDtvlVT 387 (405)
T PRK14576 361 GMVLSLETPYYGIGVGSIMLEDMILIT 387 (405)
T ss_pred CCEEEECCceeecCCCEEEEeeEEEEC
Confidence 99999998776544 233478899885
No 48
>PRK09795 aminopeptidase; Provisional
Probab=97.26 E-value=0.0046 Score=57.08 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCC-CCCC
Q 026899 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRA 190 (231)
Q Consensus 112 s~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P-~~r~ 190 (231)
.+++-+.++++.+++.++.+.+.+.++||++-.||++.+.+.+.++|........ ..+.+....++ .|.-.| ++.+
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~--~GHgiGl~~he-~p~i~~~~~~~ 311 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHN--TGHAIGIEVHE-DPRFSPRDTTT 311 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCC--CCccCCccccC-CCCcCCCCCCC
Confidence 3555567889999999999999999999999999999999999998864321111 11122222211 121122 3678
Q ss_pred CCCCCEEEEEEccEECCEE-eceeeEEEcC
Q 026899 191 LEDGDTINIDVTVYLNGYH-GDTSATFFCG 219 (231)
Q Consensus 191 L~~GDiV~iDvg~~~~GY~-aD~tRTf~VG 219 (231)
|++|.++.|+.+.+..|+. .-+.-|++|.
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 9999999999999876642 4467888884
No 49
>PRK12318 methionine aminopeptidase; Provisional
Probab=97.25 E-value=0.0033 Score=56.83 Aligned_cols=88 Identities=19% Similarity=0.203 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--ccccCCC-CCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIPD-SRALED 193 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~--~~Hg~P~-~r~L~~ 193 (231)
+.+|++.+++.++++.+.+.++||++..||+.++.+.+.+.|.... ..+.|+ .|....++. +.+..++ +.+|++
T Consensus 158 ~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~ 234 (291)
T PRK12318 158 EIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGH--GVGIKFHENPYVPHHRNSSKIPLAP 234 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccC--CcCccccCCCcccCcCCCCCCEeCC
Confidence 3467888999999999999999999999999999999999886532 122222 222222221 2222222 467999
Q ss_pred CCEEEEEEccEECC
Q 026899 194 GDTINIDVTVYLNG 207 (231)
Q Consensus 194 GDiV~iDvg~~~~G 207 (231)
|.++.|..+.+..+
T Consensus 235 GMV~~iEP~i~~~~ 248 (291)
T PRK12318 235 GMIFTIEPMINVGK 248 (291)
T ss_pred CCEEEECCEEEcCC
Confidence 99999998877653
No 50
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=97.23 E-value=0.0033 Score=58.88 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc----ccccCC-CCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC----ICHGIP-DSRAL 191 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~----~~Hg~P-~~r~L 191 (231)
+.++++.+++.++.+.+.+.++||+|-.||++++.+.+.+.|.... +..|+ .+..+.... .+.-.| ++.+|
T Consensus 270 ~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Gh--giGl~~~~~~~e~~~~l~~~~~~~L 345 (391)
T TIGR02993 270 QAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGY--PIGLSYPPDWGERTMSLRPGDNTVL 345 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCcee--eeccCcCCCCCCccccccCCCCcee
Confidence 3467788999999999999999999999999999999999886431 12222 222111100 011112 35789
Q ss_pred CCCCEEEEEEccEECCEEeceeeEEEcC
Q 026899 192 EDGDTINIDVTVYLNGYHGDTSATFFCG 219 (231)
Q Consensus 192 ~~GDiV~iDvg~~~~GY~aD~tRTf~VG 219 (231)
++|.++.+.-+.+..|+-.-+.-|++|.
T Consensus 346 ~~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 346 KPGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred cCCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 9999999999999887766778899985
No 51
>PRK12897 methionine aminopeptidase; Reviewed
Probab=97.21 E-value=0.0031 Score=55.21 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC--cccccC-C-CCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI-P-DSRALED 193 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~--~~~Hg~-P-~~r~L~~ 193 (231)
..|++.+++.++++.+.+.++||++..|++.++.+.+.+.|.... .++.|+ .+....++ .+.++. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 466777888999999999999999999999999999999886432 222222 22222222 122221 2 2468999
Q ss_pred CCEEEEEEccEE-----------------CC-EEeceeeEEEcCC
Q 026899 194 GDTINIDVTVYL-----------------NG-YHGDTSATFFCGD 220 (231)
Q Consensus 194 GDiV~iDvg~~~-----------------~G-Y~aD~tRTf~VG~ 220 (231)
|.++.+..+.+. +| +-.-++.|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 999999988872 44 5667788888853
No 52
>PRK08671 methionine aminopeptidase; Provisional
Probab=97.18 E-value=0.0033 Score=56.68 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccC--------CCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~--------P~~r 189 (231)
..+++.+.+.++++.+.+.++||++..||++.+++.+.+.|..+. .+..|+ |......|.- .++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GH------giG~~~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGH------GLERYELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCccc------CcCCCcccCCCccCccCCCCCc
Confidence 456788888999999999999999999999999999999987653 222221 1111122321 1367
Q ss_pred CCCCCCEEEEEEccE-ECCEEeceeeEEEcC
Q 026899 190 ALEDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (231)
Q Consensus 190 ~L~~GDiV~iDvg~~-~~GY~aD~tRTf~VG 219 (231)
+|++|+++.|+..+. -.|+..|-.+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 899999999998765 367888877777664
No 53
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=97.15 E-value=0.0046 Score=54.48 Aligned_cols=104 Identities=14% Similarity=0.080 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCC-CCCCCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 195 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P-~~r~L~~GD 195 (231)
+.+|++.+++.++.+++.+.++||++-.||+..+.+.+.+.|..-...-..+....+....++.-..-.+ ++++|++|.
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GM 198 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGM 198 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCccccCCCCCCCcCCCC
Confidence 4577889999999999999999999999999999999988752111000011122222222232111112 357899999
Q ss_pred EEEEEEccE-EC----------CEEeceeeEEEcCC
Q 026899 196 TINIDVTVY-LN----------GYHGDTSATFFCGD 220 (231)
Q Consensus 196 iV~iDvg~~-~~----------GY~aD~tRTf~VG~ 220 (231)
++.|..|.+ +. .|-.=++-|++|.+
T Consensus 199 vf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 199 VFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred EEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 999999987 32 46777899999964
No 54
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.12 E-value=0.004 Score=56.20 Aligned_cols=95 Identities=22% Similarity=0.182 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccC--------CCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~--------P~~r 189 (231)
..++..+++.++++.+.+.++||++..||++.+++.+.+.|..+. .++.|+ . .|. ...|+. .++.
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~-~~~~GH--g--ig~--~~~h~~~~ip~~~~~~~~ 173 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI-RNLTGH--S--IER--YRLHAGKSIPNVKGGEGT 173 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe-ecCCcc--C--ccC--ccccCCCccCccCCCCCC
Confidence 566788899999999999999999999999999999999997652 222222 1 121 122221 2357
Q ss_pred CCCCCCEEEEEEccE-ECCEEeceeeEEEcC
Q 026899 190 ALEDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (231)
Q Consensus 190 ~L~~GDiV~iDvg~~-~~GY~aD~tRTf~VG 219 (231)
+|++|+++.|+..+. -.|+..|-.+|-+..
T Consensus 174 ~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~ 204 (291)
T cd01088 174 RLEEGDVYAIEPFATTGKGYVHDGPECSIYM 204 (291)
T ss_pred EeCCCCEEEEceeEECCCCeeecCCceEEEE
Confidence 899999999998765 357777766666654
No 55
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.09 E-value=0.0075 Score=52.56 Aligned_cols=100 Identities=22% Similarity=0.193 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc---cccc-CCC-CCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC---ICHG-IPD-SRALE 192 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~---~~Hg-~P~-~r~L~ 192 (231)
..+++.+.+.++++.+.+.++||++-.||...+.+.+.+.|.... .++.|+ .+....++. +.++ .|+ +.+|+
T Consensus 124 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~-~~~~GH--giG~~~he~p~~~~~~~~~~~~~~le 200 (255)
T PRK12896 124 EAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVV-RDLTGH--GVGRSLHEEPSVILTYTDPLPNRLLR 200 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCcccC--CcCcccccCCCccccCCCCCCCCEec
Confidence 356778888889999999999999999999999999999886431 222222 222111111 1111 133 57899
Q ss_pred CCCEEEEEEccEE------------------CCEEeceeeEEEcCC
Q 026899 193 DGDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (231)
Q Consensus 193 ~GDiV~iDvg~~~------------------~GY~aD~tRTf~VG~ 220 (231)
+|.++.|+.+.+. +++..-+..|++|.+
T Consensus 201 ~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~ 246 (255)
T PRK12896 201 PGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTR 246 (255)
T ss_pred CCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcC
Confidence 9999999977752 244555888998864
No 56
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.98 E-value=0.0092 Score=51.76 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC----CCC----------CCCC--CCCCCeeeecCCCc
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA----YPS----------PLGY--GGFPKSVCTSVNEC 180 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga----~ps----------~l~y--~gFp~~v~sg~n~~ 180 (231)
+..+++.+.+.++++.+.+.++||++-.||++++.+.+.+++. .+. ...| .++...+....++
T Consensus 103 ~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e- 181 (243)
T cd01087 103 DEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD- 181 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-
Confidence 3466778888999999999999999999999999988876532 110 0011 1122222222222
Q ss_pred cccc--CC-CCCCCCCCCEEEEEEccEECC-----------EEeceeeEEEcCC
Q 026899 181 ICHG--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCGD 220 (231)
Q Consensus 181 ~~Hg--~P-~~r~L~~GDiV~iDvg~~~~G-----------Y~aD~tRTf~VG~ 220 (231)
.++. .+ ++.+|++|.++.+..+.+..| +-.-+..|++|.+
T Consensus 182 ~p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 182 VGGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred CccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 2222 23 357899999999999998765 5566788888853
No 57
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.98 E-value=0.0073 Score=54.61 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--cccc-CC-CCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~--~~Hg-~P-~~r~L~~ 193 (231)
..|++.+++.++++.+.+.++||++..||+.++.+.+.++|... ..++.|+ .|....++. +++. .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 46789999999999999999999999999999999998887542 1222221 222222221 2221 12 2468999
Q ss_pred CCEEEEEEccEE
Q 026899 194 GDTINIDVTVYL 205 (231)
Q Consensus 194 GDiV~iDvg~~~ 205 (231)
|.++.|..+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999998875
No 58
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.96 E-value=0.005 Score=51.77 Aligned_cols=98 Identities=24% Similarity=0.345 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCeeeecCCCcccccC-C-CCCCCCCCC
Q 026899 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA-YPSPLGYGGFPKSVCTSVNECICHGI-P-DSRALEDGD 195 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga-~ps~l~y~gFp~~v~sg~n~~~~Hg~-P-~~r~L~~GD 195 (231)
.+++.+.+.++++.+.+.++||+|..||.+.+.+.+.++|. .+.+. .+.+.+.....+..|.-. + ++.+|++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~---~~GH~iG~~~~~~~P~i~~~~~~~~l~~gm 180 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPH---GLGHGIGLEFHEPGPNIARPGDDTVLEPGM 180 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTS---SSEEEESSSSSEEEEEESSTTTSSB--TTB
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeee---cccccccccccccceeeecccccceecCCC
Confidence 78888888999999999999999999999999999999986 22111 112222221111112211 2 567999999
Q ss_pred EEEEEEccE-ECCE-EeceeeEEEcC
Q 026899 196 TINIDVTVY-LNGY-HGDTSATFFCG 219 (231)
Q Consensus 196 iV~iDvg~~-~~GY-~aD~tRTf~VG 219 (231)
++.++.+.. ..|. -.-+.-|++|.
T Consensus 181 v~~iep~~~~~~~~~g~~~ed~v~Vt 206 (207)
T PF00557_consen 181 VFAIEPGLYFIPGWGGVRFEDTVLVT 206 (207)
T ss_dssp EEEEEEEEEEETTSEEEEEBEEEEEE
T ss_pred ceeEeeeEEccCCCcEEEEEEEEEEC
Confidence 999999877 4454 55666677663
No 59
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.79 E-value=0.014 Score=55.18 Aligned_cols=84 Identities=19% Similarity=0.241 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC--cccccCCC--CCCCCCC
Q 026899 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIPD--SRALEDG 194 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~--~~~Hg~P~--~r~L~~G 194 (231)
.|++.+.+.++++.+.+.++||++-.||.+++++.+.++|... ..+|.|+ .|....++ .++|+..+ ..+|++|
T Consensus 252 ~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~-v~~~~GH--GIG~~~He~P~i~~~~~~~~~~~l~~G 328 (396)
T PLN03158 252 SRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSV-VKSYCGH--GIGELFHCAPNIPHYARNKAVGVMKAG 328 (396)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCc-cCCccCC--ccccccCCCCCCCcccCCCCCCEecCC
Confidence 4678888999999999999999999999999999999988643 1223222 22222222 24554322 3689999
Q ss_pred CEEEEEEccEE
Q 026899 195 DTINIDVTVYL 205 (231)
Q Consensus 195 DiV~iDvg~~~ 205 (231)
.++.|.-+.+.
T Consensus 329 MVfTIEP~i~~ 339 (396)
T PLN03158 329 QVFTIEPMINA 339 (396)
T ss_pred cEEEECCeecc
Confidence 99999887764
No 60
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.79 E-value=0.014 Score=50.41 Aligned_cols=98 Identities=19% Similarity=0.187 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCeeeecCCCcccccCCCCCCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY--GGFPKSVCTSVNECICHGIPDSRALEDG 194 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y--~gFp~~v~sg~n~~~~Hg~P~~r~L~~G 194 (231)
...+++.+.+.++++.+.+.++||++-.||+.++.+.+.+.|+.+. .+| +++...+.++.+... -..+|++|
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~-~~~~~h~~g~~~~~~~~~~~-----~~~~l~~g 193 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPV-EGVLSHQLKRVVSSGEGKAK-----LVECVKHG 193 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEe-cCccccCcCceEecCCCCcc-----chhhccCC
Confidence 4678889999999999999999999999999999999999995321 011 111222222222110 14679999
Q ss_pred CEEEEEEccEECC-EEeceeeEEEcCC
Q 026899 195 DTINIDVTVYLNG-YHGDTSATFFCGD 220 (231)
Q Consensus 195 DiV~iDvg~~~~G-Y~aD~tRTf~VG~ 220 (231)
.++.+.......| +-.-+.-|++|.+
T Consensus 194 mvf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 194 LLFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred cccccceeEccCCCeEEEEEEEEEEcC
Confidence 9999999998766 7788999999964
No 61
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.76 E-value=0.0088 Score=54.15 Aligned_cols=93 Identities=25% Similarity=0.315 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccc-------CC-CCCC
Q 026899 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG-------IP-DSRA 190 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg-------~P-~~r~ 190 (231)
.++..+.+.++++.+.+.++||++..||++++++.+.+.|..+. .++.|+. + | ....|+ .+ ++.+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHg--i--g--~~~~h~g~~ip~i~~~~~~~ 178 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHS--M--A--PYRLHGGKSIPNVKERDTTK 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcc--e--e--cccccCCCccCeecCCCCCE
Confidence 47788889999999999999999999999999999999998663 3333332 1 1 112232 11 3568
Q ss_pred CCCCCEEEEEEccE-ECCEEeceeeEEEc
Q 026899 191 LEDGDTINIDVTVY-LNGYHGDTSATFFC 218 (231)
Q Consensus 191 L~~GDiV~iDvg~~-~~GY~aD~tRTf~V 218 (231)
|++|+++.|+..+. -.|+..|..+|-+.
T Consensus 179 le~GmV~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 179 LEEGDVVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred eCCCCEEEEceeEECCcCeEecCCCeEEE
Confidence 99999999998665 35788777766544
No 62
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=96.51 E-value=0.032 Score=51.91 Aligned_cols=101 Identities=24% Similarity=0.228 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCcccccCC-CCCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALEDG 194 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~--sg~n~~~~Hg~P-~~r~L~~G 194 (231)
..|+..+++.++++++.++++||+|-.|++..+.+.+.++|.-.... .+..+.+. ..+++.-..-.| ++.+|++|
T Consensus 263 ~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~G 340 (384)
T COG0006 263 EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGVGFVLDVHEHPQYLSPGSDTTLEPG 340 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccCCCCcccCcCccccCCCCCccccCC
Confidence 35578889999999999999999999999999999999976533211 12222222 112111101112 36789999
Q ss_pred CEEEEEEccEE-CCEEeceeeEEEcCC
Q 026899 195 DTINIDVTVYL-NGYHGDTSATFFCGD 220 (231)
Q Consensus 195 DiV~iDvg~~~-~GY~aD~tRTf~VG~ 220 (231)
-++.++.|.++ +++-.-+..+++|.+
T Consensus 341 Mv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 341 MVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred cEEEeccccccCCCceEEEEEEEEEcC
Confidence 99999999885 447778899999965
No 63
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.36 E-value=0.046 Score=48.84 Aligned_cols=89 Identities=16% Similarity=0.091 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccC-CCC-CCCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDS-RALEDG 194 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~-P~~-r~L~~G 194 (231)
+..++.++.+.++|..+.+.++||.+..||-+++++.+..+|..+. .+|.|..-.-..=..-.++|+. +.. .+|++|
T Consensus 120 ~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vV-r~~~GHgig~~~He~p~ip~y~~~~~~~~l~~G 198 (255)
T COG0024 120 EDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVV-RNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEG 198 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEe-ecccCCccCcccCCCCeeccccCCCCCcccCCC
Confidence 4566778899999999999999999999999999999998886553 3444421110011112456642 223 589999
Q ss_pred CEEEEEEccEEC
Q 026899 195 DTINIDVTVYLN 206 (231)
Q Consensus 195 DiV~iDvg~~~~ 206 (231)
+++.|+--+..+
T Consensus 199 mv~aIEPmi~~G 210 (255)
T COG0024 199 MVFAIEPMINTG 210 (255)
T ss_pred CEEEEeeEEEcC
Confidence 999998777654
No 64
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.31 E-value=0.032 Score=52.64 Aligned_cols=100 Identities=22% Similarity=0.233 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCeeeecCCCcccccCC------CC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG--FPKSVCTSVNECICHGIP------DS 188 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~g--Fp~~v~sg~n~~~~Hg~P------~~ 188 (231)
...+++.+.+.++++.+.+.++||++-.||..++++.+.+.|+.+. .++.| +...+--|....++++.+ .+
T Consensus 138 ~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v-~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~ 216 (389)
T TIGR00495 138 GRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPV-EGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDT 216 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCceeecccceeccCCCeeeecCCccccCCCCC
Confidence 3466677888889999999999999999999999999999997653 22221 111111111122233221 13
Q ss_pred CCCCCCCEEEEEEccEE-CCEEecee-eEEE
Q 026899 189 RALEDGDTINIDVTVYL-NGYHGDTS-ATFF 217 (231)
Q Consensus 189 r~L~~GDiV~iDvg~~~-~GY~aD~t-RTf~ 217 (231)
..+++|+++.||..+.. .|+.-+.. ||-+
T Consensus 217 ~~le~gev~aIEp~vs~G~g~v~~~~~~~ti 247 (389)
T TIGR00495 217 AEFEENEVYAVDILVSTGEGKAKDADQRTTI 247 (389)
T ss_pred CEecCCCEEEEeeeecCCCceEEECCCeeEE
Confidence 47999999999998874 55555544 3443
No 65
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=96.13 E-value=0.045 Score=52.93 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCeeeecCCCccccc---CC-----C
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY--PSPLGYGGFPKSVCTSVNECICHG---IP-----D 187 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~--ps~l~y~gFp~~v~sg~n~~~~Hg---~P-----~ 187 (231)
..+...+++.+|++.+++.++||++-.||++++++.+.+.|.. .-.+.+..+...+..|......|+ +| +
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~ 343 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGE 343 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCC
Confidence 4677888899999999999999999999999999999999853 000000011222222332223444 33 2
Q ss_pred CCCCCCCCEEEEEEccE-ECCEEeceeeEEEc
Q 026899 188 SRALEDGDTINIDVTVY-LNGYHGDTSATFFC 218 (231)
Q Consensus 188 ~r~L~~GDiV~iDvg~~-~~GY~aD~tRTf~V 218 (231)
..+|++|+++.|+..+. -.||..|-.+|-+.
T Consensus 344 ~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 344 NTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred CCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 46899999999998887 47888885555544
No 66
>PRK10879 proline aminopeptidase P II; Provisional
Probab=95.68 E-value=0.14 Score=48.78 Aligned_cols=101 Identities=18% Similarity=0.236 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCCCC-------CCCC-CCCCeeeecCCCcccccC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGYG-GFPKSVCTSVNECICHGI 185 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~----~~Ga~ps~-------l~y~-gFp~~v~sg~n~~~~Hg~ 185 (231)
..|++.+++.++.+++.+.++||++-.||...+.+.+. +.|..+.. .+|. .|++.++.+.. ...|-.
T Consensus 283 ~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG-ldvHd~ 361 (438)
T PRK10879 283 AQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG-LDVHDV 361 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC-cCcCcC
Confidence 35677888888999999999999999999988876543 33432100 0011 13333322221 112322
Q ss_pred ----C-CCCCCCCCCEEEEEEccEEC----------CEEeceeeEEEcC
Q 026899 186 ----P-DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCG 219 (231)
Q Consensus 186 ----P-~~r~L~~GDiV~iDvg~~~~----------GY~aD~tRTf~VG 219 (231)
+ ++++|++|.++.|..|.++. |+-.-+.-|++|.
T Consensus 362 ~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 362 GVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred CCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 2 35799999999999998863 4555677888885
No 67
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=94.43 E-value=0.69 Score=40.10 Aligned_cols=97 Identities=16% Similarity=0.102 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCc--ccccCCCCCCCCC
Q 026899 119 MRVSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALED 193 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i-~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~--sg~n~~--~~Hg~P~~r~L~~ 193 (231)
.|++.+++.++...+.+.+ +||++-.+|++.+.+.+.+.|.+- ....| +.|. ...++. +.+...++.+|++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~--~h~~G--HgIG~~l~~hE~P~i~~~~~~~~~L~~ 188 (224)
T cd01085 113 QKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDY--GHGTG--HGVGSFLNVHEGPQSISPAPNNVPLKA 188 (224)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCC--CCCCC--CCCCCCCcCCCCCCcCCcCCCCCCcCC
Confidence 3445555566666666666 589999999999999998887531 00111 1222 111221 1101113578999
Q ss_pred CCEEEEEEccEECC-EEeceeeEEEcC
Q 026899 194 GDTINIDVTVYLNG-YHGDTSATFFCG 219 (231)
Q Consensus 194 GDiV~iDvg~~~~G-Y~aD~tRTf~VG 219 (231)
|.++.|.-+.+..| +-.-+..|++|.
T Consensus 189 GmvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 189 GMILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CCEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 99999999998654 445578888885
No 68
>PRK13607 proline dipeptidase; Provisional
Probab=93.10 E-value=0.68 Score=44.40 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH----HHCCCCCC-------CCCC--CCCCCeee----ecCCCcc
Q 026899 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGY--GGFPKSVC----TSVNECI 181 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~----~~~Ga~ps-------~l~y--~gFp~~v~----sg~n~~~ 181 (231)
.++..+++.++.+.+.+.++||++-.||+.++++.+ .+.|.... ..++ ..|++.+. ..+++.-
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~ 349 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVA 349 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCC
Confidence 347788999999999999999999999998887655 44444321 0011 01333322 2222220
Q ss_pred cc----------------cCCCCCCCCCCCEEEEEEccEECC
Q 026899 182 CH----------------GIPDSRALEDGDTINIDVTVYLNG 207 (231)
Q Consensus 182 ~H----------------g~P~~r~L~~GDiV~iDvg~~~~G 207 (231)
.+ +.-.+++|++|.++.|.-|.++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 350 GFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred CcccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 00 011357999999999999999864
No 69
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=87.00 E-value=3.7 Score=37.90 Aligned_cols=82 Identities=23% Similarity=0.306 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCeeeecCCCcccccCCC--CCCCC
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGF--PKSVCTSVNECICHGIPD--SRALE 192 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gF--p~~v~sg~n~~~~Hg~P~--~r~L~ 192 (231)
+..|+-.+.+.++|+.+++.++||++-.||-..+++...++|..- ...|.|. ...+-+.+ .++|+.-+ -.+..
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sV-Vr~ycGHGig~~FH~~P--nipHya~n~a~GvM~ 305 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSV-VRSYCGHGIGRVFHCAP--NIPHYAKNKAPGVMK 305 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCcee-ehhhhccccccccccCC--CchhhcccCCcceee
Confidence 467888999999999999999999999999999999988877531 1224332 22222222 36777543 23567
Q ss_pred CCCEEEEEE
Q 026899 193 DGDTINIDV 201 (231)
Q Consensus 193 ~GDiV~iDv 201 (231)
+|..+.|.-
T Consensus 306 ~G~tFTIEP 314 (369)
T KOG2738|consen 306 PGQTFTIEP 314 (369)
T ss_pred cCceEEeee
Confidence 788777653
No 70
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=83.62 E-value=4.6 Score=41.44 Aligned_cols=102 Identities=18% Similarity=0.203 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCC-----CcccccCCCCCCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-----ECICHGIPDSRALE 192 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n-----~~~~Hg~P~~r~L~ 192 (231)
.|.+|....-.+.+++..+++||.+-.+|...+...+.+.+-+-. ..|.+.+.+|.. ..+.-..-++++|+
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~----~~~~k~lG~~iGlEFREssl~inaKnd~~lk 333 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELV----PNFTKNLGFGIGLEFRESSLVINAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchh----hhhhhhcccccceeeecccccccccchhhhc
Confidence 466788888888999999999999999999999999998874321 123333332221 11111223568999
Q ss_pred CCCEEEEEEccE-------ECCEEeceeeEEEcCCCCH
Q 026899 193 DGDTINIDVTVY-------LNGYHGDTSATFFCGDVDD 223 (231)
Q Consensus 193 ~GDiV~iDvg~~-------~~GY~aD~tRTf~VG~~s~ 223 (231)
+|++.+|.+|.. -+-|.-=++-|+.||+-++
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~~p 371 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGEDPP 371 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeecCCCc
Confidence 999999999874 2347777889999985443
No 71
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=74.80 E-value=11 Score=27.29 Aligned_cols=52 Identities=17% Similarity=0.323 Sum_probs=33.0
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC-cccccCCCCCCCCCCCEEEE
Q 026899 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (231)
Q Consensus 137 i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~-~~~Hg~P~~r~L~~GDiV~i 199 (231)
++.|.|-.|++..+|..+.++ |...+-.|... ..+.-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~-----------f~~A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQ-----------FKYALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHh-----------CCeeEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 467999999999999777654 11111112211 11223456889999999986
No 72
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=73.79 E-value=12 Score=37.90 Aligned_cols=81 Identities=21% Similarity=0.274 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecC--C---CcccccCCCCCCCCC
Q 026899 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV--N---ECICHGIPDSRALED 193 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~--n---~~~~Hg~P~~r~L~~ 193 (231)
|.+-........+.+...++||.+-.+|...+..++...|-+-.| .|-.-+..+. . ...+...-++|+||.
T Consensus 300 ~~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~ 375 (1001)
T COG5406 300 QQKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQA 375 (1001)
T ss_pred hhhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceecc
Confidence 334455566667778889999999999999999999998864321 2333222221 1 122223345799999
Q ss_pred CCEEEEEEcc
Q 026899 194 GDTINIDVTV 203 (231)
Q Consensus 194 GDiV~iDvg~ 203 (231)
|++++|.+|-
T Consensus 376 g~~fnis~gf 385 (1001)
T COG5406 376 GCIFNISLGF 385 (1001)
T ss_pred ccEEEEeecc
Confidence 9999999864
No 73
>PRK01490 tig trigger factor; Provisional
Probab=57.18 E-value=42 Score=31.73 Aligned_cols=57 Identities=19% Similarity=0.382 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCEEEEEEccEECCEEece----eeE
Q 026899 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SAT 215 (231)
Q Consensus 140 GvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDiV~iDvg~~~~GY~aD~----tRT 215 (231)
-+|+.||+..+......++-. .+.+++++.||.|.+|+....+|-.-|- ..+
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~------------------------~~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~ 186 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATL------------------------VPVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFS 186 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCcc------------------------ccccccCCCCCEEEEEEEEEECCEECcCCCCCceE
Confidence 478899999888876664422 1223568999999999999988854332 267
Q ss_pred EEcCC
Q 026899 216 FFCGD 220 (231)
Q Consensus 216 f~VG~ 220 (231)
|.+|.
T Consensus 187 ~~lg~ 191 (435)
T PRK01490 187 LELGS 191 (435)
T ss_pred EEEcC
Confidence 77773
No 74
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=48.68 E-value=67 Score=30.04 Aligned_cols=57 Identities=23% Similarity=0.455 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCC-CCCCCCCCCEEEEEEccEECCEEecee----e
Q 026899 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGDTS----A 214 (231)
Q Consensus 140 GvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P-~~r~L~~GDiV~iDvg~~~~GY~aD~t----R 214 (231)
-+|+.+|+..++....+++..- | .+++++.||.|.+|+....+|=..+-+ .
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~ 174 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDGEAFEGGKAENF 174 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECCEECcCCCCCCe
Confidence 4689999999988777655321 1 235789999999999988777554433 4
Q ss_pred EEEcCC
Q 026899 215 TFFCGD 220 (231)
Q Consensus 215 Tf~VG~ 220 (231)
+|.+|.
T Consensus 175 ~~~lg~ 180 (408)
T TIGR00115 175 SLELGS 180 (408)
T ss_pred EEEECC
Confidence 677773
No 75
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=47.05 E-value=36 Score=24.59 Aligned_cols=47 Identities=19% Similarity=0.257 Sum_probs=30.9
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCEEEE
Q 026899 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (231)
Q Consensus 137 i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDiV~i 199 (231)
++.|.|-.|++..+|..+.+. |-..+-.| +.-...+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~-----------F~~A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKG-----------FIEAVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhc-----------cEEEEEcc-----CEEECCCEEecCCCEEEE
Confidence 466999999999999766542 22111122 222345778999999987
No 76
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=44.63 E-value=41 Score=20.39 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 026899 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (231)
Q Consensus 122 Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~ 155 (231)
.|.+...++..+...++...|+.+|...+++.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4677888899999999999999999999988663
No 77
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=41.71 E-value=22 Score=25.74 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC
Q 026899 124 RLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (231)
Q Consensus 124 ~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga 159 (231)
+|+.++...+.+..+.++|+.||...+...+.+.|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344445444444444499999999999999997764
No 78
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=36.83 E-value=1.4e+02 Score=22.69 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 026899 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (231)
Q Consensus 117 e~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~ 155 (231)
.++|.-.+-+.- ++.+.+.|+|+||..||.+.++.+-.
T Consensus 26 kKIRDNqKRV~L-LdNL~~YI~~~Ms~edi~~II~nMr~ 63 (95)
T PF04363_consen 26 KKIRDNQKRVLL-LDNLSDYIKPDMSIEDIRAIIENMRS 63 (95)
T ss_pred HHHhhhHHHHHH-HHHHHHHccCCCCHHHHHHHHHHHHh
Confidence 356666655543 88889999999999999988876543
No 79
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=36.81 E-value=1.5e+02 Score=21.22 Aligned_cols=41 Identities=32% Similarity=0.340 Sum_probs=30.7
Q ss_pred CCCCCCCCEEEEEEccEE-CCEEecee------eEEEcC--CCCHHHHHh
Q 026899 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCG--DVDDEARNL 228 (231)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~-~GY~aD~t------RTf~VG--~~s~e~~~l 228 (231)
.+..++||.|.+++.+.. +|-.-|.+ .+|.+| ..-+..++.
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~~i~g~e~a 51 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQVIPGLEEA 51 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSSSSHHHHHH
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCccccchhhh
Confidence 356789999999999997 88777777 778877 455554443
No 80
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=36.14 E-value=1.1e+02 Score=30.81 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccc----------CCC
Q 026899 119 MRVSGRLAAQVLEYAGTLVKP-GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----------IPD 187 (231)
Q Consensus 119 mR~Aa~ia~~~l~~~~~~i~p-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg----------~P~ 187 (231)
.|++.-.+-++.-++.+++-| |..-..+|.+...++.+.|.+ |.+...-|+....||. .++
T Consensus 428 ek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLD--------y~HgTGHGVG~fLnVhE~P~~is~r~~~~ 499 (606)
T KOG2413|consen 428 EKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLD--------YGHGTGHGVGSFLNVHEGPIGIGYRPYSS 499 (606)
T ss_pred HHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhccc--------cCCCCCcccccceEeccCCceeeeeecCC
Confidence 344555666677777777665 777788999999999998865 1222222232322221 234
Q ss_pred CCCCCCCCEEEEEEccEECC
Q 026899 188 SRALEDGDTINIDVTVYLNG 207 (231)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~G 207 (231)
+-+|+.|-++.+.-|-+-+|
T Consensus 500 ~~~l~ag~~~s~EPGYY~dg 519 (606)
T KOG2413|consen 500 NFPLQAGMVFSIEPGYYKDG 519 (606)
T ss_pred CchhcCceEeccCCcccccC
Confidence 56788898888877666555
No 81
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=35.58 E-value=78 Score=30.54 Aligned_cols=44 Identities=23% Similarity=0.410 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCEEEEEEccEECCE
Q 026899 141 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 208 (231)
Q Consensus 141 vTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDiV~iDvg~~~~GY 208 (231)
+|+.||+..+......+... .|.++.++.||.|.||+.+..+|=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 57888888877655543211 122222899999999999988774
No 82
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=34.09 E-value=1.2e+02 Score=21.99 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=31.4
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcccccCCCCCCCCCCCEEEE
Q 026899 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (231)
Q Consensus 137 i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg~P~~r~L~~GDiV~i 199 (231)
++.|.|-.|.+..+|..+.+. |-..+.. .| ..-.+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 466999999999999766542 1111111 12 233456789999999987
No 83
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=31.19 E-value=2.9e+02 Score=26.93 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=53.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCCHHHHHHH----HHHHHHHCCCCCCCC-----CCCCCCCeeeecCC
Q 026899 110 VHDEKGIECMRVSGRLAAQVLEYAGTLVKP--GITTDEIDKA----VHQMIIDNGAYPSPL-----GYGGFPKSVCTSVN 178 (231)
Q Consensus 110 VKs~~EIe~mR~Aa~ia~~~l~~~~~~i~p--GvTe~EI~~~----v~~~~~~~Ga~ps~l-----~y~gFp~~v~sg~n 178 (231)
.-|+.+.+.+...-++-+ .+...+++ |.|-.+|... +.+.+.+.|...+.. .+.-+|+.|. .+
T Consensus 334 kFs~~Qr~LYeavL~vq~----ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVg--Hy 407 (488)
T KOG2414|consen 334 KFSDAQRDLYEAVLQVQE----ECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVG--HY 407 (488)
T ss_pred ccCcHHHHHHHHHHHHHH----HHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccc--hh
Confidence 346666666655555444 44555666 8898888654 455566667543311 1122444432 22
Q ss_pred -CcccccCC---CCCCCCCCCEEEEEEccEE
Q 026899 179 -ECICHGIP---DSRALEDGDTINIDVTVYL 205 (231)
Q Consensus 179 -~~~~Hg~P---~~r~L~~GDiV~iDvg~~~ 205 (231)
....|-.| .+.+|++|-++.|.-|++.
T Consensus 408 LGmDVHD~p~v~r~~pL~pg~ViTIEPGvYI 438 (488)
T KOG2414|consen 408 LGMDVHDCPTVSRDIPLQPGMVITIEPGVYI 438 (488)
T ss_pred cCcccccCCCCCCCccCCCCceEEecCceec
Confidence 12344444 4789999999999999875
No 84
>PRK05423 hypothetical protein; Provisional
Probab=30.07 E-value=74 Score=24.49 Aligned_cols=28 Identities=25% Similarity=0.493 Sum_probs=23.0
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 026899 128 QVLEYAGTLVKPGITTDEIDKAVHQMII 155 (231)
Q Consensus 128 ~~l~~~~~~i~pGvTe~EI~~~v~~~~~ 155 (231)
..++.+.+.|+||||..||...+..+-.
T Consensus 43 lLLdNL~~YIk~~Ms~e~i~~II~nMr~ 70 (104)
T PRK05423 43 LLLDNLSDYIKPGMSIEEIQGIIANMKS 70 (104)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 3567788899999999999988886644
No 85
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=29.83 E-value=1.3e+02 Score=28.39 Aligned_cols=49 Identities=22% Similarity=0.406 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccc---CCCCCCCCCCCEEEE
Q 026899 138 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG---IPDSRALEDGDTINI 199 (231)
Q Consensus 138 ~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~gFp~~v~sg~n~~~~Hg---~P~~r~L~~GDiV~i 199 (231)
+.|-|-.|+++.+|.-+.++ |-...-.|. .+.|. .--+.+|+++|+|.|
T Consensus 311 r~GsTV~Dvc~~IH~~l~~~-----------FryA~VWGk--Svk~~~QrVG~dHvLeD~DIV~I 362 (365)
T COG1163 311 RRGSTVGDVCRKIHRDLVEN-----------FRYARVWGK--SVKHPGQRVGLDHVLEDEDIVEI 362 (365)
T ss_pred eCCCcHHHHHHHHHHHHHHh-----------cceEEEecc--CCCCCccccCcCcCccCCCeEEE
Confidence 34789999999999998875 333333444 23443 123678999999987
No 86
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=28.80 E-value=76 Score=21.55 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHh---hh-cCCC-CCHHHHHHHHHH
Q 026899 118 CMRVSGRLAAQVLEYAG---TL-VKPG-ITTDEIDKAVHQ 152 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~---~~-i~pG-vTe~EI~~~v~~ 152 (231)
.+.+|++|+.+++..-. +. ++.| +|+.|++.++.-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 46788899988886422 22 3456 799999987653
No 87
>PRK15131 mannose-6-phosphate isomerase; Provisional
Probab=28.22 E-value=2.8e+02 Score=26.25 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=31.7
Q ss_pred hhcCcccccccchhhhhccCCCCceeeEEeecccchhhhhhhhcccC
Q 026899 18 FVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNL 64 (231)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (231)
++|.........|+-||..---.+-+|+|+|-. ...++.+|.|...
T Consensus 69 ~LG~~~~~~f~~lP~L~KiL~a~~~LSIQvHPd-~~~A~~~f~~e~~ 114 (389)
T PRK15131 69 LLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPN-KRAAEIGFAKENA 114 (389)
T ss_pred HcCcchhhhcCCCceEeeeeccCCCceeEeCCC-HHHHHHHhhhccc
Confidence 567655433224666777777789999999998 5677777775543
No 88
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=27.35 E-value=1.6e+02 Score=24.31 Aligned_cols=38 Identities=8% Similarity=0.033 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCC
Q 026899 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY 160 (231)
Q Consensus 123 a~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ 160 (231)
..+++.+...+......+++..||...+++.+.+.|..
T Consensus 85 ~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~ 122 (154)
T PRK00464 85 EAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEV 122 (154)
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCE
Confidence 34555555555554446899999999999999999864
No 89
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=26.37 E-value=2.6e+02 Score=26.50 Aligned_cols=107 Identities=17% Similarity=0.313 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC----CCCe---------------
Q 026899 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG----FPKS--------------- 172 (231)
Q Consensus 112 s~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~g----Fp~~--------------- 172 (231)
|+.||+-+-++-......+......+-|..++.||...++..+.+.-+.|. .|..+ ++.-
T Consensus 98 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT-iNlN~lf~~~~~d~~~~~~LQ~~~~~lM 176 (381)
T PF09506_consen 98 SDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT-INLNSLFDLVPDDVERQQQLQQMMQELM 176 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc-cchHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999887774 23211 0000
Q ss_pred -------eeec-CCCcccccCCCC----------CCCCCCCEEEEEEccEECC-------------EEeceeeEEEcC
Q 026899 173 -------VCTS-VNECICHGIPDS----------RALEDGDTINIDVTVYLNG-------------YHGDTSATFFCG 219 (231)
Q Consensus 173 -------v~sg-~n~~~~Hg~P~~----------r~L~~GDiV~iDvg~~~~G-------------Y~aD~tRTf~VG 219 (231)
-+-| .|+...|..|+- ++-..||+=..|+--.+.| |+.+-|-++.+|
T Consensus 177 ~~Ll~~A~~~GL~~SFFlH~aPNLGrd~~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG 254 (381)
T PF09506_consen 177 NELLEKAEAQGLENSFFLHYAPNLGRDANGREILKPATAGDVGTTDIQFMLRGAIKEAGLLVLLNRYIAQRTGKAPLG 254 (381)
T ss_pred HHHHHHHHhCCcccceEEEeCCCCCCCCCcceeecccccCCCCchhhhhhhhhhhhhcchhHHHHHHHHhhcCCCCcc
Confidence 1122 356677887751 2345688888887665544 555555555555
No 90
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=25.08 E-value=3.4e+02 Score=25.85 Aligned_cols=83 Identities=20% Similarity=0.227 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCC--CCC-------CCCCCeeeecCCCcccccCCCCCCCC
Q 026899 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP--LGY-------GGFPKSVCTSVNECICHGIPDSRALE 192 (231)
Q Consensus 122 Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~--l~y-------~gFp~~v~sg~n~~~~Hg~P~~r~L~ 192 (231)
+-..|..+++.+...++||-+-..|-+.+..-..+.++.|.. +.. .|-.+++......-.-| -..-.++
T Consensus 145 vI~AAh~A~eaa~rllkpgn~n~~vT~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~--~e~~~fe 222 (398)
T KOG2776|consen 145 VIAAAHLAAEAALRLLKPGNTNTQVTRAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKE--HEKTEFE 222 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhcc--ccccccc
Confidence 344566678888999999999999999999988888887641 100 12222222111110001 1234678
Q ss_pred CCCEEEEEEccEEC
Q 026899 193 DGDTINIDVTVYLN 206 (231)
Q Consensus 193 ~GDiV~iDvg~~~~ 206 (231)
++++..+|+.+..+
T Consensus 223 ~~Evya~Di~~stg 236 (398)
T KOG2776|consen 223 EHEVYAIDILVSTG 236 (398)
T ss_pred cceeEEEEEEEecC
Confidence 88899999888764
No 91
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=24.75 E-value=2.8e+02 Score=26.35 Aligned_cols=95 Identities=18% Similarity=0.317 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-C---CC----------------
Q 026899 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG-F---PK---------------- 171 (231)
Q Consensus 112 s~~EIe~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~g-F---p~---------------- 171 (231)
|+.||+-+-++-......+......+-|..++.||...++..+.+.-+.|. .|..+ | +.
T Consensus 104 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT-iNlN~lf~~v~~d~~~~~~LQ~~~~~lM 182 (389)
T TIGR02399 104 SKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT-INLNSLFDLVKDDSEIRKILQKSFEDLM 182 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc-cchHHHHHHccchHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999887774 22211 0 00
Q ss_pred ------eeeec-CCCcccccCCC---------CCCCCCCCEEEEEEccEECC
Q 026899 172 ------SVCTS-VNECICHGIPD---------SRALEDGDTINIDVTVYLNG 207 (231)
Q Consensus 172 ------~v~sg-~n~~~~Hg~P~---------~r~L~~GDiV~iDvg~~~~G 207 (231)
.-+-| .|+...|.-|+ -++-.+||+=..|+--.+.|
T Consensus 183 ~~Ll~~A~~~GL~~SFFlH~aPNLG~d~G~E~lk~A~~~d~GTTDiQfml~G 234 (389)
T TIGR02399 183 NELMYKAKTQGLENSFFLHIAPNLGSDNGNEIIKLASKGDIGTTDIQFMLKG 234 (389)
T ss_pred HHHHHHHHhCCcccceEEEeCCcCCCccccEeecccCCCCCCchhhHHHhcc
Confidence 01122 35667788775 12446688888887766554
No 92
>COG4001 Predicted metal-binding protein [General function prediction only]
Probab=22.58 E-value=2.2e+02 Score=21.78 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC
Q 026899 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (231)
Q Consensus 118 ~mR~Aa~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~Ga 159 (231)
.-|.++++....++....+ -|+.|.||.+.++......|.
T Consensus 53 kCra~a~ivkkive~garA--fgVdee~iRE~~~d~ywrrGl 92 (102)
T COG4001 53 KCRALASIVKKIVERGARA--FGVDEEDIREQMHDQYWRRGL 92 (102)
T ss_pred HHHHHHHHHHHHHHhcchh--cCCCHHHHHHHHHHHHHHHHH
Confidence 4556666666666655543 499999999999988887774
No 93
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=22.14 E-value=1.2e+02 Score=24.35 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCHHHHHHHHHH
Q 026899 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQ 152 (231)
Q Consensus 123 a~ia~~~l~~~~~~i~pGvTe~EI~~~v~~ 152 (231)
+.+|..+-..+.+.+..|.|..||-..+.+
T Consensus 56 a~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v~ 85 (126)
T TIGR03147 56 SPIAYDLRHEVYSMVNEGKSNQQIIDFMTA 85 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 468888999999999999999999876443
No 94
>PF03701 UPF0181: Uncharacterised protein family (UPF0181); InterPro: IPR005371 This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH P76260 from SWISSPROT.
Probab=21.08 E-value=1.7e+02 Score=19.86 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=24.5
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHC
Q 026899 128 QVLEYAGTLVKPGITTDEIDKAVHQMIIDN 157 (231)
Q Consensus 128 ~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~ 157 (231)
++.+.+.+.+..|++..|.-..+.+.+++.
T Consensus 15 ~AvE~Iq~LMaqGmSsgEAI~~VA~~iRe~ 44 (51)
T PF03701_consen 15 QAVERIQELMAQGMSSGEAIAIVAQEIREE 44 (51)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 456677777888999999999998888865
No 95
>PF14615 Rsa3: Ribosome-assembly protein 3
Probab=20.89 E-value=29 Score=23.09 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 026899 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGI 141 (231)
Q Consensus 113 ~~EIe~mR~Aa~ia~~~l~~~~~~i~pGv 141 (231)
.+||+.+|+|-......+..+.+.++.|.
T Consensus 15 gdDLd~lR~~~dF~~~sl~~Li~aL~~G~ 43 (47)
T PF14615_consen 15 GDDLDELRKAPDFTDKSLPLLIDALQQGT 43 (47)
T ss_pred HHHHHHHhcCCCCCchhHHHHHHHHHhcc
Confidence 36788888888888888888888777775
No 96
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.46 E-value=1.7e+02 Score=26.54 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEEccEECCEEeceeeEEEcCCCCHHHHHhhc
Q 026899 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVK 230 (231)
Q Consensus 190 ~L~~GDiV~iDvg~~~~GY~aD~tRTf~VG~~s~e~~~l~e 230 (231)
-+.+| +|.+|-.+++..--+|++-|=++|..+++..+-|+
T Consensus 201 ~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~efy~gY~ 240 (286)
T COG3001 201 FGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPEFYDGYQ 240 (286)
T ss_pred ccCCC-CeeeccccccCCcccceehhhhhcCCcHHHHHhhh
Confidence 34567 99999999999999999999999888888776554
No 97
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=20.30 E-value=73 Score=22.04 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=14.3
Q ss_pred HHhhhcCCCCCHHHHHHHH
Q 026899 132 YAGTLVKPGITTDEIDKAV 150 (231)
Q Consensus 132 ~~~~~i~pGvTe~EI~~~v 150 (231)
...+.|++|||..||..++
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 3467799999999998664
No 98
>COG3140 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.12 E-value=1.4e+02 Score=20.75 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=25.2
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHCC
Q 026899 128 QVLEYAGTLVKPGITTDEIDKAVHQMIIDNG 158 (231)
Q Consensus 128 ~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G 158 (231)
++++.+.+.+..||+..|.-+.+...+++..
T Consensus 15 ~AVE~Iq~lMaeGmSsGEAIa~VA~elRe~h 45 (60)
T COG3140 15 KAVERIQELMAEGMSSGEAIALVAQELRENH 45 (60)
T ss_pred HHHHHHHHHHHccccchhHHHHHHHHHHHHh
Confidence 4666777778889999999999999888753
Done!