BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026900
(231 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224124634|ref|XP_002330072.1| predicted protein [Populus trichocarpa]
gi|222871497|gb|EEF08628.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 142/155 (91%)
Query: 66 AVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGA 125
AVPRRNAMALILSSY+FS+FGF N A AQQSVGFREYID FDGYSFKYPQNWIQVRGAGA
Sbjct: 1 AVPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGA 60
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP+VLDEN+SVELSSPSSSRYKSVEDLGPP+EAG+KVL+QYLTEFMSTRLGVRRE
Sbjct: 61 DIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRE 120
Query: 186 SNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
SNILSTSSRVADDG+LYY VEV+ N +L V
Sbjct: 121 SNILSTSSRVADDGKLYYQVEVNIKSYANNNELAV 155
>gi|224124990|ref|XP_002319475.1| predicted protein [Populus trichocarpa]
gi|118485159|gb|ABK94442.1| unknown [Populus trichocarpa]
gi|222857851|gb|EEE95398.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 127/156 (81%), Positives = 140/156 (89%)
Query: 65 FAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAG 124
FAVPRRNAMALILSSYIFS+ GF N A AQ+SVGFREYID FDGYS K+PQNWIQVRGAG
Sbjct: 51 FAVPRRNAMALILSSYIFSEVGFNNIAFAQRSVGFREYIDQFDGYSLKHPQNWIQVRGAG 110
Query: 125 ADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRR 184
ADIF+RDP+VLDEN+SVELSSPSSS YKSVEDLGPP+EAG+KVL+QYLTEFMSTRLGVRR
Sbjct: 111 ADIFFRDPFVLDENLSVELSSPSSSNYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRR 170
Query: 185 ESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
ESNI+STSSRVADDG+LYY VEV+ N +L V
Sbjct: 171 ESNIISTSSRVADDGKLYYQVEVNIKSYANNNELAV 206
>gi|255542948|ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223548498|gb|EEF49989.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 265
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/168 (74%), Positives = 145/168 (86%), Gaps = 3/168 (1%)
Query: 41 PLPREALHVTASNEKKNPVMAATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFR 100
P+ ++ T+ + K P A FAVPRR+ MALI SS I S+ GF ++ALAQ SVGFR
Sbjct: 32 PISADSTRCTSISCKNQPTKA---FAVPRRSTMALIFSSCILSEVGFHSSALAQSSVGFR 88
Query: 101 EYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPP 160
EYIDTFDGYSFKYP+NWIQVRGAGADIF+RDPYVLDEN+SVE+SSPSSS+Y SVEDLGPP
Sbjct: 89 EYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPP 148
Query: 161 KEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVS 208
+EAG+KVL+QYLTEFMSTRLGVRRES+ILSTSSRVADDG+LYY VEV+
Sbjct: 149 QEAGKKVLKQYLTEFMSTRLGVRRESDILSTSSRVADDGKLYYQVEVN 196
>gi|311335431|gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
Length = 257
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/156 (80%), Positives = 139/156 (89%), Gaps = 1/156 (0%)
Query: 66 AVPRRNAMALILSSYIFSDFGFR-NTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAG 124
++PRRNAMALILS+YIFS+ G N A A+ SVGFREYIDTFDGYS KYPQNWIQVRGAG
Sbjct: 43 SIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVGFREYIDTFDGYSLKYPQNWIQVRGAG 102
Query: 125 ADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRR 184
ADIF+RDPYVLDEN+SVELSSPSSSRYK+VEDLGPP+EAG+KVL+QYLTEFMSTRLGVRR
Sbjct: 103 ADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRR 162
Query: 185 ESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
ESNILSTSSRVADDG+LYY VEV+ N +L V
Sbjct: 163 ESNILSTSSRVADDGKLYYQVEVNIKSYANTNELAV 198
>gi|296089803|emb|CBI39622.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 148/181 (81%), Gaps = 1/181 (0%)
Query: 41 PLPREALHVTASNEKKNPVMAATQ-FAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGF 99
P P + +AS+ + + T+ FAV RR+AMALI SSYIFS G + ALAQ SVGF
Sbjct: 9 PAPFATTNYSASSRAISCQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGF 68
Query: 100 REYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGP 159
REYIDTFDGYSFKYPQNWIQVRG+GADIF+RDP+VLDEN+SVELSSPSSSRYKSVEDLG
Sbjct: 69 REYIDTFDGYSFKYPQNWIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQ 128
Query: 160 PKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLL 219
P+EAG+KVL+QYLTEFMSTRLGVRRESNI+STSSRVADDGR YY VEV+ N +L
Sbjct: 129 PQEAGKKVLQQYLTEFMSTRLGVRRESNIVSTSSRVADDGRTYYQVEVNIKSYANNNELA 188
Query: 220 V 220
V
Sbjct: 189 V 189
>gi|359487555|ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1, chloroplastic [Vitis
vinifera]
Length = 282
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 148/181 (81%), Gaps = 1/181 (0%)
Query: 41 PLPREALHVTASNEKKNPVMAATQ-FAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGF 99
P P + +AS+ + + T+ FAV RR+AMALI SSYIFS G + ALAQ SVGF
Sbjct: 43 PAPFATTNYSASSRAISCQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGF 102
Query: 100 REYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGP 159
REYIDTFDGYSFKYPQNWIQVRG+GADIF+RDP+VLDEN+SVELSSPSSSRYKSVEDLG
Sbjct: 103 REYIDTFDGYSFKYPQNWIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQ 162
Query: 160 PKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLL 219
P+EAG+KVL+QYLTEFMSTRLGVRRESNI+STSSRVADDGR YY VEV+ N +L
Sbjct: 163 PQEAGKKVLQQYLTEFMSTRLGVRRESNIVSTSSRVADDGRTYYQVEVNIKSYANNNELA 222
Query: 220 V 220
V
Sbjct: 223 V 223
>gi|388502234|gb|AFK39183.1| unknown [Lotus japonicus]
Length = 326
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/258 (52%), Positives = 167/258 (64%), Gaps = 53/258 (20%)
Query: 1 MARMVMM--QHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNP 58
MA+MV+ QH P FS L S+LS F+ + +Q++ +++ P+ + TAS+ KK
Sbjct: 1 MAKMVVAPPQHHNQPSFSPLASSLSEFSSPTFLTQIQLKRKVWQPKGSFSATASSPKKML 60
Query: 59 VMAATQF------------------------------------------------AVPRR 70
+M +F AVPRR
Sbjct: 61 MMGGNRFTGVFLSRLFVKEGHQVTLCTRGEVPITQHLPDESDSDCADFSSKSKAFAVPRR 120
Query: 71 NAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYR 130
AM+LILSS I S G A AQQ FREY+DTFDGYSFKYP NWIQVRGAGADIF+R
Sbjct: 121 KAMSLILSSCILSKVGL---AFAQQPPVFREYVDTFDGYSFKYPGNWIQVRGAGADIFFR 177
Query: 131 DPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILS 190
DPY+LDEN+S+E+SSPSSS+YKSVEDLGPP+EAG+KVL+QYLTEFMSTRLGVRRE+N+LS
Sbjct: 178 DPYILDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRREANVLS 237
Query: 191 TSSRVADDGRLYYLVEVS 208
TSSRVADDG+LYY VEV+
Sbjct: 238 TSSRVADDGKLYYQVEVN 255
>gi|356571066|ref|XP_003553702.1| PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 1,
chloroplastic-like [Glycine max]
Length = 227
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 140/176 (79%), Gaps = 6/176 (3%)
Query: 45 EALHVTASNEKKNPVMAATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYID 104
EA + +K+N A FAVPRR AM+LILSSY+ S+ G ALAQQS FREYID
Sbjct: 2 EAAESNLAVDKEN---HAKAFAVPRRKAMSLILSSYVLSEVGL---ALAQQSPVFREYID 55
Query: 105 TFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
FDG SF+YP +WIQVRGAGADIF+RDP+VLDEN+SVE+S PSSS+YK+VEDLG P+EAG
Sbjct: 56 AFDGCSFQYPGSWIQVRGAGADIFFRDPFVLDENLSVEISXPSSSQYKNVEDLGAPQEAG 115
Query: 165 RKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
+KVL+QYLTEFMSTRLGVRRESNILSTSSRV DDGRLYY +EV+ N +L V
Sbjct: 116 KKVLKQYLTEFMSTRLGVRRESNILSTSSRVTDDGRLYYQIEVNIKSYANNNELAV 171
>gi|356505763|ref|XP_003521659.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Glycine max]
Length = 258
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/160 (75%), Positives = 137/160 (85%), Gaps = 3/160 (1%)
Query: 61 AATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV 120
+A FAVPRR A++LILSSY S+ G ALAQQS FREYID FDGYSF+YP +WIQV
Sbjct: 43 SAKAFAVPRRKALSLILSSYFLSEAGL---ALAQQSPVFREYIDAFDGYSFQYPGSWIQV 99
Query: 121 RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRL 180
RGAGADIF+RDP+VLDEN+S+E+SSPSSS+YKSVEDLGPP+EAG+KVL+QYLTEFMSTRL
Sbjct: 100 RGAGADIFFRDPFVLDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRL 159
Query: 181 GVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
GVRRESNILSTSSRVADDGRLYY VEV+ N +L V
Sbjct: 160 GVRRESNILSTSSRVADDGRLYYQVEVNIKSYANNNELAV 199
>gi|449443516|ref|XP_004139523.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Cucumis sativus]
gi|449520599|ref|XP_004167321.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Cucumis sativus]
Length = 258
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/155 (76%), Positives = 133/155 (85%), Gaps = 5/155 (3%)
Query: 66 AVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGA 125
AVPRR+AMAL+LS+ IFS N+ALA SVG EYIDTFDGYSFKYP+NWIQVRGAGA
Sbjct: 50 AVPRRSAMALMLSTCIFS-----NSALAVSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGA 104
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP+VLDEN+SVE SSPSSSRY SV+DLGPP+EAG+KVL+QYLTEFMSTRLGVRRE
Sbjct: 105 DIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRE 164
Query: 186 SNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
SNILSTSSR+ADDGR YY VEV+ N +L V
Sbjct: 165 SNILSTSSRMADDGRTYYQVEVNIKSYANNNELAV 199
>gi|297804700|ref|XP_002870234.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297316070|gb|EFH46493.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 286
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 138/197 (70%), Gaps = 15/197 (7%)
Query: 26 NGASLHSQVRQQQQTPLPREALHVTASNEKKNPVMAATQFAVPRRNAM--ALILSSYIFS 83
+G S + +P+PR +L A AV RR +M L++S + S
Sbjct: 47 SGPKHQSSKSAKPDSPVPRNSL-----------TDAKQVCAVGRRRSMMMGLLMSGLMVS 95
Query: 84 DFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVEL 143
+ TA A SV FREYIDTFDGYSFKYPQNWIQVRGAGADIF+RDP VLDEN+SVE
Sbjct: 96 EANL-PTAFASISV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEF 153
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
SSPSSS+Y S+EDLG P+E G++VLRQYLTEFMSTRLGV+RE+NILSTSSRVADDG+LYY
Sbjct: 154 SSPSSSKYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKREANILSTSSRVADDGKLYY 213
Query: 204 LVEVSCVWCWNITQLLV 220
VEV+ N +L V
Sbjct: 214 QVEVNIKSYANNNELAV 230
>gi|242083818|ref|XP_002442334.1| hypothetical protein SORBIDRAFT_08g018390 [Sorghum bicolor]
gi|241943027|gb|EES16172.1| hypothetical protein SORBIDRAFT_08g018390 [Sorghum bicolor]
Length = 255
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGA 125
VPRRN ++ +LS+ G R LA+ S G FREYID FDGY+F YP++WIQVRGAGA
Sbjct: 43 VPRRNVLSTMLSTSTILLLGPRQITLAETSGGAFREYIDIFDGYTFLYPKSWIQVRGAGA 102
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP+VLDEN+SVE+SSPSSS+Y SVEDLGPP++A KVL+QYLTEFMSTRLGVRRE
Sbjct: 103 DIFFRDPFVLDENMSVEISSPSSSKYMSVEDLGPPEKAAEKVLKQYLTEFMSTRLGVRRE 162
Query: 186 SNILSTSSRVADDGRLYYLVEVSC 209
SN+LS S+VADDG+LYY VEV+
Sbjct: 163 SNVLSAVSKVADDGKLYYEVEVNI 186
>gi|42572917|ref|NP_974555.1| PsbP domain-containing protein 1 [Arabidopsis thaliana]
gi|332658212|gb|AEE83612.1| PsbP domain-containing protein 1 [Arabidopsis thaliana]
Length = 229
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/156 (69%), Positives = 122/156 (78%), Gaps = 4/156 (2%)
Query: 66 AVPRRNAM--ALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA 123
AV RR +M L++S I S TA A V FREYIDTFDGYSFKYPQNWIQVRGA
Sbjct: 76 AVGRRKSMMMGLLMSGLIVSQANL-PTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGA 133
Query: 124 GADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVR 183
GADIF+RDP VLDEN+SVE SSPSSS Y S+EDLG P+E G++VLRQYLTEFMSTRLGV+
Sbjct: 134 GADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVK 193
Query: 184 RESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLL 219
R++NILSTSSRVADDG+LYY VEVS N LL
Sbjct: 194 RQANILSTSSRVADDGKLYYQVEVSQSQVPNYILLL 229
>gi|226506430|ref|NP_001146583.1| uncharacterized protein LOC100280179 [Zea mays]
gi|195611674|gb|ACG27667.1| thylakoid lumenal 21.5 kDa protein [Zea mays]
gi|223942997|gb|ACN25582.1| unknown [Zea mays]
Length = 335
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGA 125
+ RRN ++ +LS++ G +LA+ + G FREYIDTFDGY+F YP+NWIQVRGAGA
Sbjct: 123 IQRRNVLSTMLSAWTILLLGPGQVSLAETTGGAFREYIDTFDGYTFLYPKNWIQVRGAGA 182
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP VLDEN+SVE+SSPSSSRY SVEDLGPP++A KVL QYLTEFMSTRLGVRRE
Sbjct: 183 DIFFRDPMVLDENMSVEISSPSSSRYTSVEDLGPPEKAAEKVLGQYLTEFMSTRLGVRRE 242
Query: 186 SNILSTSSRVADDGRLYYLVEVSC 209
SN+LS SS+VADDG+LYY VEV+
Sbjct: 243 SNVLSASSKVADDGKLYYEVEVNI 266
>gi|219887905|gb|ACL54327.1| unknown [Zea mays]
Length = 216
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGA 125
+ RRN ++ +LS++ G +LA+ + G FREYIDTFDGY+F YP+NWIQVRGAGA
Sbjct: 4 IQRRNVLSTMLSAWTILLLGPGQVSLAETTGGAFREYIDTFDGYTFLYPKNWIQVRGAGA 63
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP VLDEN+SVE+SSPSSSRY SVEDLGPP++A KVL QYLTEFMSTRLGVRRE
Sbjct: 64 DIFFRDPMVLDENMSVEISSPSSSRYTSVEDLGPPEKAAEKVLGQYLTEFMSTRLGVRRE 123
Query: 186 SNILSTSSRVADDGRLYYLVEVSC 209
SN+LS SS+VADDG+LYY VEV+
Sbjct: 124 SNVLSASSKVADDGKLYYEVEVNI 147
>gi|18414467|ref|NP_567468.1| PsbP domain-containing protein 1 [Arabidopsis thaliana]
gi|13959580|sp|O23403.1|PPD1_ARATH RecName: Full=PsbP domain-containing protein 1, chloroplastic;
AltName: Full=OEC23-like protein 3; AltName:
Full=PsbP-related thylakoid lumenal protein 1; Flags:
Precursor
gi|2244908|emb|CAB10329.1| hypothetical protein [Arabidopsis thaliana]
gi|7268298|emb|CAB78593.1| hypothetical protein [Arabidopsis thaliana]
gi|332658213|gb|AEE83613.1| PsbP domain-containing protein 1 [Arabidopsis thaliana]
Length = 287
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/157 (68%), Positives = 123/157 (78%), Gaps = 4/157 (2%)
Query: 66 AVPRRNAM--ALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA 123
AV RR +M L++S I S TA A V FREYIDTFDGYSFKYPQNWIQVRGA
Sbjct: 76 AVGRRKSMMMGLLMSGLIVSQANL-PTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGA 133
Query: 124 GADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVR 183
GADIF+RDP VLDEN+SVE SSPSSS Y S+EDLG P+E G++VLRQYLTEFMSTRLGV+
Sbjct: 134 GADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVK 193
Query: 184 RESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
R++NILSTSSRVADDG+LYY VEV+ N +L V
Sbjct: 194 RQANILSTSSRVADDGKLYYQVEVNIKSYANNNELAV 230
>gi|115489108|ref|NP_001067041.1| Os12g0564400 [Oryza sativa Japonica Group]
gi|108862837|gb|ABA98969.2| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113649548|dbj|BAF30060.1| Os12g0564400 [Oryza sativa Japonica Group]
gi|215737646|dbj|BAG96776.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765534|dbj|BAG87231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 249
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGA 125
VPRRN ++ +LS+ FG + LA+ + G FREYIDTFDGYSF YP++WIQVRGAGA
Sbjct: 37 VPRRNVLSTMLSTSTVFLFGPKQITLAETTGGTFREYIDTFDGYSFLYPKSWIQVRGAGA 96
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP+ LDEN+SVE+SSPSSS+Y +VEDLGPP++A +VL+QYLTEFMSTRLGVRR
Sbjct: 97 DIFFRDPFFLDENMSVEISSPSSSKYMTVEDLGPPEKAAERVLQQYLTEFMSTRLGVRRT 156
Query: 186 SNILSTSSRVADDGRLYYLVEVS 208
SNILS SS+VADDG+LYY VEV+
Sbjct: 157 SNILSASSKVADDGKLYYEVEVN 179
>gi|116791965|gb|ABK26180.1| unknown [Picea sitchensis]
Length = 270
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 121/160 (75%), Gaps = 4/160 (2%)
Query: 49 VTASNEKKNPVMAATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDG 108
+A E P + T F+ RR + ++ S F ALA+ + ++EY D FDG
Sbjct: 44 TSAHKESSQPPL--TTFS--RRILLYYTFTTAFASHVAFNELALAKPAFRYKEYFDNFDG 99
Query: 109 YSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVL 168
Y+FKYP+NWIQVRGA ADIF+RDP LDENVSV+++SPSSS++ S++DLGPP+ AG KVL
Sbjct: 100 YTFKYPRNWIQVRGANADIFFRDPINLDENVSVDITSPSSSKFNSIKDLGPPEAAGEKVL 159
Query: 169 RQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVS 208
RQYLTEFMSTRLGVRRESNILSTSSRVADDG++YY ++V+
Sbjct: 160 RQYLTEFMSTRLGVRRESNILSTSSRVADDGKMYYDIQVN 199
>gi|21537231|gb|AAM61572.1| unknown [Arabidopsis thaliana]
Length = 287
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/157 (68%), Positives = 123/157 (78%), Gaps = 4/157 (2%)
Query: 66 AVPRRNAM--ALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA 123
AV RR +M L++S I S TA A V FREYIDTFDGYSFKYPQNWIQVRGA
Sbjct: 76 AVGRRKSMMMGLLMSGLIVSQANL-PTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGA 133
Query: 124 GADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVR 183
GADIF+RDP VLDEN+SVE SSPSSS Y S+EDLG P+E G++VLRQYLTEFMSTRLGV+
Sbjct: 134 GADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVK 193
Query: 184 RESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLV 220
R++NILSTSSRVADDG+LYY VEV+ N +L V
Sbjct: 194 RQANILSTSSRVADDGKLYYQVEVNIKSYANNNELAV 230
>gi|34394134|dbj|BAC84394.1| putative Thylakoid lumenal 21.5 kDa protein, chloroplast precursor
[Oryza sativa Japonica Group]
gi|50509637|dbj|BAD31480.1| putative Thylakoid lumenal 21.5 kDa protein, chloroplast precursor
[Oryza sativa Japonica Group]
Length = 249
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 120/143 (83%), Gaps = 1/143 (0%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQ-QSVGFREYIDTFDGYSFKYPQNWIQVRGAGA 125
VPRRN ++ +LS+ FG + LA+ FREYIDTFDGYSF YP++WIQVRGAGA
Sbjct: 37 VPRRNVLSTMLSTSTVILFGSKQITLAEITGATFREYIDTFDGYSFLYPKSWIQVRGAGA 96
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP+VLDEN+SVE+SSPSSS+Y +VEDLGPP++A +VL+QYLTEFMSTRLGVRR
Sbjct: 97 DIFFRDPFVLDENMSVEISSPSSSKYVTVEDLGPPEKAAERVLQQYLTEFMSTRLGVRRT 156
Query: 186 SNILSTSSRVADDGRLYYLVEVS 208
SNILS SS+VADDG+LYY VEV+
Sbjct: 157 SNILSASSKVADDGKLYYEVEVN 179
>gi|125557948|gb|EAZ03484.1| hypothetical protein OsI_25622 [Oryza sativa Indica Group]
gi|125599820|gb|EAZ39396.1| hypothetical protein OsJ_23828 [Oryza sativa Japonica Group]
Length = 274
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 120/143 (83%), Gaps = 1/143 (0%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQ-QSVGFREYIDTFDGYSFKYPQNWIQVRGAGA 125
VPRRN ++ +LS+ FG + LA+ FREYIDTFDGYSF YP++WIQVRGAGA
Sbjct: 37 VPRRNVLSTMLSTSTVILFGSKQITLAEITGATFREYIDTFDGYSFLYPKSWIQVRGAGA 96
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
DIF+RDP+VLDEN+SVE+SSPSSS+Y +VEDLGPP++A +VL+QYLTEFMSTRLGVRR
Sbjct: 97 DIFFRDPFVLDENMSVEISSPSSSKYVTVEDLGPPEKAAERVLQQYLTEFMSTRLGVRRT 156
Query: 186 SNILSTSSRVADDGRLYYLVEVS 208
SNILS SS+VADDG+LYY VEV+
Sbjct: 157 SNILSASSKVADDGKLYYEVEVN 179
>gi|79325123|ref|NP_001031646.1| PsbP domain-containing protein 1 [Arabidopsis thaliana]
gi|51969264|dbj|BAD43324.1| unknown protein [Arabidopsis thaliana]
gi|332658214|gb|AEE83614.1| PsbP domain-containing protein 1 [Arabidopsis thaliana]
Length = 205
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/148 (70%), Positives = 118/148 (79%), Gaps = 2/148 (1%)
Query: 73 MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDP 132
M L++S I S TA A V FREYIDTFDGYSFKYPQNWIQVRGAGADIF+RDP
Sbjct: 3 MGLLMSGLIVSQANL-PTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDP 60
Query: 133 YVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTS 192
VLDEN+SVE SSPSSS Y S+EDLG P+E G++VLRQYLTEFMSTRLGV+R++NILSTS
Sbjct: 61 VVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTS 120
Query: 193 SRVADDGRLYYLVEVSCVWCWNITQLLV 220
SRVADDG+LYY VEV+ N +L V
Sbjct: 121 SRVADDGKLYYQVEVNIKSYANNNELAV 148
>gi|357161753|ref|XP_003579193.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Brachypodium distachyon]
Length = 268
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Query: 66 AVPRRNAMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAG 124
+VPRRN ++ +LS+ G + LA+ + G FREYIDTFDGYSF YP+ WIQV+GAG
Sbjct: 54 SVPRRNVLSTLLSASTVLLLGRKKIGLAETTGGAFREYIDTFDGYSFLYPKGWIQVKGAG 113
Query: 125 ADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRR 184
ADIF+RDP +LD N+SV++SSPSSS Y++VEDLGPP++A VL+QYLTEFMSTRLGVRR
Sbjct: 114 ADIFFRDPVLLDVNMSVDISSPSSSNYQTVEDLGPPEKAADAVLKQYLTEFMSTRLGVRR 173
Query: 185 ESNILSTSSRVADDGRLYYLVEVS 208
ESN+LS SS+VADDG+LYY VEV+
Sbjct: 174 ESNVLSASSKVADDGKLYYQVEVN 197
>gi|108862838|gb|ABA98971.2| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|215694664|dbj|BAG89855.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 143
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 110/125 (88%), Gaps = 1/125 (0%)
Query: 85 FGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVEL 143
FG + LA+ + G FREYIDTFDGYSF YP++WIQVRGAGADIF+RDP+ LDEN+SVE+
Sbjct: 10 FGPKQITLAETTGGTFREYIDTFDGYSFLYPKSWIQVRGAGADIFFRDPFFLDENMSVEI 69
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
SSPSSS+Y +VEDLGPP++A +VL+QYLTEFMSTRLGVRR SNILS SS+VADDG+LYY
Sbjct: 70 SSPSSSKYMTVEDLGPPEKAAERVLQQYLTEFMSTRLGVRRTSNILSASSKVADDGKLYY 129
Query: 204 LVEVS 208
VEV+
Sbjct: 130 EVEVN 134
>gi|125537045|gb|EAY83533.1| hypothetical protein OsI_38745 [Oryza sativa Indica Group]
gi|125579740|gb|EAZ20886.1| hypothetical protein OsJ_36525 [Oryza sativa Japonica Group]
Length = 204
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 85 FGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVEL 143
FG + LA+ + G FREYIDTFDGYSF YP++WIQVRGAGADIF+RDP+ LDEN+SVE+
Sbjct: 10 FGPKQITLAETTGGTFREYIDTFDGYSFLYPKSWIQVRGAGADIFFRDPFFLDENMSVEI 69
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
SSPSSS+Y +VEDLGPP++A +VL+QYLTEFMSTRLGVRR SNILS SS+VADDG+LYY
Sbjct: 70 SSPSSSKYMTVEDLGPPEKAAERVLQQYLTEFMSTRLGVRRTSNILSASSKVADDGKLYY 129
Query: 204 LVEVSC 209
VEV+
Sbjct: 130 EVEVNI 135
>gi|192764531|gb|ACF05809.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764533|gb|ACF05810.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764535|gb|ACF05811.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764537|gb|ACF05812.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764539|gb|ACF05813.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764541|gb|ACF05814.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764543|gb|ACF05815.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764545|gb|ACF05816.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764547|gb|ACF05817.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764549|gb|ACF05818.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764551|gb|ACF05819.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764553|gb|ACF05820.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764555|gb|ACF05821.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764557|gb|ACF05822.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764559|gb|ACF05823.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764561|gb|ACF05824.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764563|gb|ACF05825.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764565|gb|ACF05826.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764571|gb|ACF05829.1| chloroplast photosystem II reaction center protein [Populus
tremula]
gi|192764573|gb|ACF05830.1| chloroplast photosystem II reaction center protein [Populus
tremula]
Length = 104
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/104 (85%), Positives = 100/104 (96%)
Query: 103 IDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKE 162
ID FDGYS KYPQNWIQVRGAGADIF+RDP+VLDEN+SVELSSPSSS+YKSVEDLGPP+E
Sbjct: 1 IDQFDGYSLKYPQNWIQVRGAGADIFFRDPFVLDENLSVELSSPSSSKYKSVEDLGPPEE 60
Query: 163 AGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
AG+KVL+QYLTEFMSTR+GV R+SNI+STSSRVADDG+LYY VE
Sbjct: 61 AGKKVLKQYLTEFMSTRIGVMRDSNIISTSSRVADDGKLYYQVE 104
>gi|192764569|gb|ACF05828.1| chloroplast photosystem II reaction center protein [Populus
tremula]
Length = 104
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/104 (84%), Positives = 100/104 (96%)
Query: 103 IDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKE 162
ID FDGYS KYPQNWIQVRGAGADIF+RDP+VLDEN+SVELSSPSSS+YKS+EDLGPP+E
Sbjct: 1 IDQFDGYSLKYPQNWIQVRGAGADIFFRDPFVLDENLSVELSSPSSSKYKSIEDLGPPEE 60
Query: 163 AGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
AG+KVL+QYLTEFMSTR+GV R+SNI+STSSRVADDG+LYY VE
Sbjct: 61 AGKKVLKQYLTEFMSTRIGVMRDSNIISTSSRVADDGKLYYQVE 104
>gi|192764567|gb|ACF05827.1| chloroplast photosystem II reaction center protein [Populus
tremula]
Length = 104
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/104 (85%), Positives = 100/104 (96%)
Query: 103 IDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKE 162
ID FDGYS KYPQNWIQVRGAGADIF+RDP+VLDEN+SVELSSPSSS+YKSVEDLGPP+E
Sbjct: 1 IDQFDGYSSKYPQNWIQVRGAGADIFFRDPFVLDENLSVELSSPSSSKYKSVEDLGPPEE 60
Query: 163 AGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
AG+KVL+QYLTEFMSTR+GV R+SNI+STSSRVADDG+LYY VE
Sbjct: 61 AGKKVLKQYLTEFMSTRIGVMRDSNIISTSSRVADDGKLYYQVE 104
>gi|168028840|ref|XP_001766935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681914|gb|EDQ68337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 98/122 (80%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
+R+Y+D DGY+F YP WIQVRGAGAD+F+RDP LDENV VE+SSPSSS++KSVEDLG
Sbjct: 18 YRKYVDRLDGYAFSYPSGWIQVRGAGADVFFRDPVNLDENVLVEMSSPSSSKFKSVEDLG 77
Query: 159 PPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQL 218
PP+EA +KVL+Q LTEFMSTR+GVRRE+NI +T SRV DG+LYY VEV N QL
Sbjct: 78 PPEEAAKKVLQQQLTEFMSTRIGVRREANITATRSRVGGDGKLYYEVEVVASSYANNNQL 137
Query: 219 LV 220
V
Sbjct: 138 AV 139
>gi|302840062|ref|XP_002951587.1| hypothetical protein VOLCADRAFT_61541 [Volvox carteri f.
nagariensis]
gi|300263196|gb|EFJ47398.1| hypothetical protein VOLCADRAFT_61541 [Volvox carteri f.
nagariensis]
Length = 268
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
G+R +D DGYSF P+NWI V +G DIF R+P +++EN+ V+++SPSSSR+KSV DL
Sbjct: 84 GYRLLVDKLDGYSFICPENWIAVTSSGNDIFLRNPRIVEENLFVDITSPSSSRFKSVGDL 143
Query: 158 GPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNIT 216
G P EA +++L QYLT EFMSTRLG+ R I+S SSRVADDG+ YY + + +
Sbjct: 144 GTPDEAAKRLLDQYLTKEFMSTRLGISRYGEIVSASSRVADDGQTYYDIAIRMTSYGSRN 203
Query: 217 QLLVTRIFILSLFEL 231
TR +L + L
Sbjct: 204 AYAATRAEVLRDYSL 218
>gi|302795047|ref|XP_002979287.1| hypothetical protein SELMODRAFT_57446 [Selaginella moellendorffii]
gi|302813820|ref|XP_002988595.1| hypothetical protein SELMODRAFT_47401 [Selaginella moellendorffii]
gi|300143702|gb|EFJ10391.1| hypothetical protein SELMODRAFT_47401 [Selaginella moellendorffii]
gi|300153055|gb|EFJ19695.1| hypothetical protein SELMODRAFT_57446 [Selaginella moellendorffii]
Length = 179
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 89/111 (80%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
F+ + D FDGYSF YP +W QVRGAGAD F+R P LDE+V+V++SSPSSSRY+S+E+LG
Sbjct: 1 FKVFEDPFDGYSFSYPGSWFQVRGAGADCFFRSPVNLDESVTVDVSSPSSSRYQSIEELG 60
Query: 159 PPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
P++A + +L+Q TEFMSTRLGVRRE N+LS+ SRV DGRL Y VEV+
Sbjct: 61 LPQDAAQGLLKQLSTEFMSTRLGVRREINVLSSRSRVDGDGRLLYEVEVNA 111
>gi|159476000|ref|XP_001696102.1| lumenal PsbP-like protein [Chlamydomonas reinhardtii]
gi|158275273|gb|EDP01051.1| lumenal PsbP-like protein [Chlamydomonas reinhardtii]
Length = 257
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 97 VGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G+R + D DGYSF P+NW+ V +G DIF R+P ++EN+ V+++SPSSSRYKSVED
Sbjct: 75 AGYRLFNDKLDGYSFVCPENWLAVTSSGNDIFLRNPRSVEENLFVDITSPSSSRYKSVED 134
Query: 157 LGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEV 207
LG P++A ++L QYLT EFMSTRLG+ R I+S + R ADDG++YY + +
Sbjct: 135 LGSPQDAANRLLDQYLTKEFMSTRLGIARYGEIVSANKRTADDGKVYYDIAI 186
>gi|307109920|gb|EFN58157.1| hypothetical protein CHLNCDRAFT_141958 [Chlorella variabilis]
Length = 215
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
G+R + D DGYSF YP++W V +G D+F+R+P+ ++EN+ V +SSPSSS+Y++V DL
Sbjct: 34 GYRYHEDKLDGYSFFYPEDWQPVTTSGNDVFFRNPFNVEENLFVNVSSPSSSKYETVADL 93
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQ 217
G P+EA + +QYL EFMSTRLGV+R + +++ S R A DGRLYY + + Q
Sbjct: 94 GAPEEAATRTEQQYLEEFMSTRLGVKRTAEVVAASQRTAPDGRLYYDTQTRVKSFASRNQ 153
Query: 218 LLVTRIFI 225
L VT+ I
Sbjct: 154 LAVTQAEI 161
>gi|303288447|ref|XP_003063512.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455344|gb|EEH52648.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 179
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 76/97 (78%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
FR + DT DGY P++WI+V+G+G D+F+R+P +EN+ V +SSPSS+++ +V DLG
Sbjct: 1 FRPFNDTIDGYKLFRPEDWIEVKGSGNDVFFRNPARAEENMFVSISSPSSTKFDTVRDLG 60
Query: 159 PPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRV 195
P++ +KVL QYLTEFMSTR+GVRRES+++S + RV
Sbjct: 61 TPEDVAKKVLDQYLTEFMSTRIGVRRESSVVSAAERV 97
>gi|255089168|ref|XP_002506506.1| predicted protein [Micromonas sp. RCC299]
gi|226521778|gb|ACO67764.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
Query: 91 ALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSR 150
A + G+R + DT DGY P++WI+V+G+G D+F+R+P ++EN+ V +SSPSS++
Sbjct: 90 AFTRPPPGYRPFNDTIDGYKLFRPEDWIEVKGSGNDVFFRNPSSVEENMFVSISSPSSTK 149
Query: 151 YKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADD----GRLYYLVE 206
+ S DLG P EA +K+L QYL EFMS+RLGVRRES+++S R D L+Y VE
Sbjct: 150 FASPRDLGTPDEAAQKILAQYLNEFMSSRLGVRRESSVVSAREREGTDVDGEPMLFYDVE 209
Query: 207 V 207
+
Sbjct: 210 L 210
>gi|145355006|ref|XP_001421763.1| lumenal PsbP-like protein [Ostreococcus lucimarinus CCE9901]
gi|144582001|gb|ABP00057.1| lumenal PsbP-like protein [Ostreococcus lucimarinus CCE9901]
Length = 271
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Query: 71 NAMALILSSYIFSDFGFRNTALA--QQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIF 128
+AM LS+ + A A + +GF Y D DGY F P W++VRG+G D+F
Sbjct: 48 DAMRAALSAVALARVAIATPARAFERPPIGFARYTDAIDGYGFDRPSAWVEVRGSGNDVF 107
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+RD ++ N V +SSPSSS Y+SVEDLG ++A ++VL QY+ E MSTRLGVRRE I
Sbjct: 108 FRDASEVETNAFVAVSSPSSSAYESVEDLGTAEDAAKRVLEQYVGELMSTRLGVRREKEI 167
Query: 189 LSTSSRVADDGRLYYLVEV 207
L+ R DG++YY VEV
Sbjct: 168 LNARRRTKSDGKVYYDVEV 186
>gi|412985183|emb|CCO20208.1| predicted protein [Bathycoccus prasinos]
Length = 304
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 9/160 (5%)
Query: 51 ASNEKKNPVMAATQFAVPRRNAMALILSSYIFSD-FGFRNTALAQQSV----GFREYIDT 105
+S +KKN T+ R + L +SS++ + G ++ AQ GF +IDT
Sbjct: 60 SSGKKKNKSGLNTR----REMMLTLGVSSFVLTGGLGGKDENKAQAFTRPPPGFDLFIDT 115
Query: 106 FDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGR 165
DGY F P +W++V+G+G DIFYR+P ++EN V +SSPSS+ Y SV D+G P+E
Sbjct: 116 IDGYEFLRPSSWVEVKGSGNDIFYRNPRNVEENCFVAISSPSSNVYASVRDVGTPEETAE 175
Query: 166 KVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLV 205
K+L+Q L E STRLG+ RES ++S + DG +Y +
Sbjct: 176 KILKQTLIELTSTRLGIIRESEVVSAKEDLDKDGTAFYDI 215
>gi|384251657|gb|EIE25134.1| Mog1p/PsbP-like protein [Coccomyxa subellipsoidea C-169]
Length = 196
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 76/110 (69%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
GF + D DGY F P++W+ V +G DIFYR+P ++EN+ V++SSPSSS + +VEDL
Sbjct: 13 GFSVHQDKLDGYLFFVPESWLPVTTSGNDIFYRNPRNVNENLFVDVSSPSSSNFSTVEDL 72
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEV 207
G P+EA ++ L QYL E MSTR+GV+R ILS R DG+ YY ++V
Sbjct: 73 GSPEEAAKRTLNQYLEELMSTRIGVKRTGEILSADKRTGPDGKEYYDIQV 122
>gi|308812694|ref|XP_003083654.1| putative Thylakoid lumenal (ISS) [Ostreococcus tauri]
gi|116055535|emb|CAL58203.1| putative Thylakoid lumenal (ISS) [Ostreococcus tauri]
Length = 206
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 73 MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDP 132
+AL L + G R A + G+ Y+D DG G D+F+RDP
Sbjct: 6 LALGLGHVLALGRGDRAWAYERPRAGYARYVDAIDG---------------GNDVFFRDP 50
Query: 133 YVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTS 192
++ N VE+SSP+SS Y SV DLG P+EA KVL +YL E MSTRLGVRRE ++
Sbjct: 51 REVETNAFVEVSSPTSSGYGSVRDLGTPEEAAEKVLDRYLGELMSTRLGVRREKEVVRAR 110
Query: 193 SRVADDGRLYYLVEV 207
DG+ YY VEV
Sbjct: 111 EVTGKDGKAYYDVEV 125
>gi|116781263|gb|ABK22029.1| unknown [Picea sitchensis]
gi|148908317|gb|ABR17272.1| unknown [Picea sitchensis]
Length = 239
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 49 VTASNEKKNPVMAATQFAVPRRNAMALI--LSSYIFSDFGFRNTALAQQS-VGFREYIDT 105
V AS + N V A Q RR +A++ L++ +F F NTALA Q+ GF+ ++D
Sbjct: 41 VRASAQGDN-VYLAKQGTTARREVLAVVGALTASVF----FTNTALAAQAPKGFQAFLDK 95
Query: 106 FDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGR 165
FDGYSF YP W +V G D Y+D E+VS+ + S + + +LGPP++
Sbjct: 96 FDGYSFLYPFGWQEVVVNGQDKAYKDVIEPLESVSITIVPTSKT---DIHELGPPEQVAE 152
Query: 166 KVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
++R+ L+ +++ +L+ R A +G++YY E
Sbjct: 153 TLVRKVLSS-------PSQKTKLLNVKERTA-EGKIYYTFE 185
>gi|22299618|ref|NP_682865.1| photosystem II oxygen-evolving complex 23K protein PsbP-like
protein [Thermosynechococcus elongatus BP-1]
gi|22295802|dbj|BAC09627.1| psbP [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAG-ADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y+D++DGY F YP+ W+QV+ D+ + D ENVSV +++ +S+ KS+E+
Sbjct: 25 GLQAYVDSYDGYEFLYPRGWVQVQVEDPVDVVFHDIIETTENVSVVVNTVAST--KSLEE 82
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P+E G ++LR + S R S +++ +S+ ADD + YY++E
Sbjct: 83 LGSPEEVGDRLLRNIIAPSESG-----RSSALIAATSQKADD-KTYYILE 126
>gi|354568357|ref|ZP_08987522.1| photosystem II oxygen evolving complex protein PsbP [Fischerella
sp. JSC-11]
gi|353540720|gb|EHC10193.1| photosystem II oxygen evolving complex protein PsbP [Fischerella
sp. JSC-11]
Length = 180
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 69 RRNAMALILS-SYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGAD 126
+R A+ L+L S+ F+++G + AL R ++DT DGY F YP W+QVR G D
Sbjct: 3 KRIAVILLLVLSFSFTNYGTASAAL-------RSFVDTSDGYQFLYPNGWVQVRVTDGPD 55
Query: 127 IFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRES 186
+ + D ENVSV +S + KS+ +LG P E G K+ + L S R
Sbjct: 56 VVFHDLIEFSENVSVVISPVPEA--KSLPELGTPSEVGYKLAKNALAPEGSGRTAE---- 109
Query: 187 NILSTSSRVADDGRLYYLVE 206
L + +V DG++YY +E
Sbjct: 110 --LVNAEQVESDGKIYYKLE 127
>gi|427705531|ref|YP_007047908.1| photosystem II oxygen evolving complex protein PsbP [Nostoc sp. PCC
7107]
gi|427358036|gb|AFY40758.1| photosystem II oxygen evolving complex protein PsbP [Nostoc sp. PCC
7107]
Length = 182
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ GF+ Y+DT DGY F YP W+ V+ A G D+ + D + ENVSV +S S K++
Sbjct: 25 AAGFKSYVDTADGYQFSYPNGWLPVKVANGPDVVFHDLIEISENVSVVISPVSEG--KTL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
++LG P E G K+ + L S R + ++ + D+G++YY++E
Sbjct: 83 KELGAPTEVGYKLGKAALAPSDSGRT-----AELVDAREKEDDEGKIYYVLE 129
>gi|440683961|ref|YP_007158756.1| photosystem II oxygen evolving complex protein PsbP [Anabaena
cylindrica PCC 7122]
gi|428681080|gb|AFZ59846.1| photosystem II oxygen evolving complex protein PsbP [Anabaena
cylindrica PCC 7122]
Length = 181
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 81 IFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENV 139
+FS F F N+ +A + GF+ ++D+ DGY F YP W+QV+ A G D+ + D + ENV
Sbjct: 12 VFS-FSFSNSDVAA-AAGFKSFVDSADGYQFLYPNGWLQVKVANGPDVVFHDLIEISENV 69
Query: 140 SVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDG 199
SV +S + K++ +LG P E G K+ + L S R + E L+ + + +G
Sbjct: 70 SVVISPVPAG--KNLAELGTPTEVGYKLGKAALAPVDSGR---KAE---LTNAVQKESNG 121
Query: 200 RLYYLVE 206
++YYL+E
Sbjct: 122 KIYYLLE 128
>gi|304445658|pdb|2XB3|A Chain A, The Structure Of Cyanobacterial Psbp
Length = 165
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAG-ADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y+D++DGY F YP+ W+QV+ D+ + D ENVSV +++ +S+ KS+E+
Sbjct: 7 GLQAYVDSYDGYEFLYPRGWVQVQVEDPVDVVFHDIIETTENVSVVVNTVAST--KSLEE 64
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P+E G ++LR + S R S +++ +S+ ADD + YY++E
Sbjct: 65 LGSPEEVGDRLLRNIIAPSESG-----RSSALIAATSQKADD-KTYYILE 108
>gi|17230568|ref|NP_487116.1| hypothetical protein all3076 [Nostoc sp. PCC 7120]
gi|17132170|dbj|BAB74775.1| all3076 [Nostoc sp. PCC 7120]
Length = 246
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 95 QSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKS 153
++ GF+ ++DT DGY F YP W+QV+ A G D+ + D + EN+SV +S KS
Sbjct: 89 EAAGFKSFVDTADGYEFSYPNGWLQVKVANGPDVVFHDLIEISENISVVISPVPDD--KS 146
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+++LG P E G K+ + L S R S L +S +GR YY +E
Sbjct: 147 LQELGTPTEVGYKLGKAALAPPDSGR------SAELVNASEYESEGRTYYHLE 193
>gi|158333805|ref|YP_001514977.1| photosystem II oxygen evolution complex protein PsbP [Acaryochloris
marina MBIC11017]
gi|359458641|ref|ZP_09247204.1| photosystem II oxygen evolution complex protein PsbP [Acaryochloris
sp. CCMEE 5410]
gi|158304046|gb|ABW25663.1| photosystem II oxygen evolution complex protein PsbP [Acaryochloris
marina MBIC11017]
Length = 179
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 69 RRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAG-ADI 127
R A+ALI+ S A A + G + Y D DGY+F YP W ++ G +D+
Sbjct: 4 RIAALALIILSLTLQ-------ACASDTAGLQAYADNIDGYTFMYPNGWAPIKVPGSSDV 56
Query: 128 FYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESN 187
+ D ENVSV +S +S + DLG P E R +L + S +E++
Sbjct: 57 VFHDLIEETENVSVVVSDITSD--TQLTDLGDPTEVARTLLNAVIAPSQSG-----QEAD 109
Query: 188 ILSTSSRVADDGRLYYLVEVSCVWC----WNITQLLVTR--IFILSL 228
+L+ +SR DD ++YY +E S N++ ++V R +F LSL
Sbjct: 110 LLAAASRTEDD-KVYYALEYSVDLPIGKRHNLSTVVVRRGKLFTLSL 155
>gi|427731619|ref|YP_007077856.1| PsbP [Nostoc sp. PCC 7524]
gi|427367538|gb|AFY50259.1| PsbP [Nostoc sp. PCC 7524]
Length = 181
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 85 FGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVEL 143
F N +A + GF+ ++DT DGY F YP W+QV+ A G D+ + D + ENVSV +
Sbjct: 15 FSLTNPGVAT-AAGFKSFVDTTDGYEFLYPNGWLQVKVANGPDVVFHDLIEISENVSVVI 73
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
S ++ S+++LG P E G K+ + L S R S L + +G++YY
Sbjct: 74 SPVPENQ--SLKELGTPTEVGYKLGKAALAPPDSGR------SAELVNALEKESEGKIYY 125
Query: 204 LVE 206
++E
Sbjct: 126 ILE 128
>gi|75907057|ref|YP_321353.1| photosystem II oxygen evolving complex protein PsbP [Anabaena
variabilis ATCC 29413]
gi|75700782|gb|ABA20458.1| Photosystem II oxygen evolving complex protein PsbP [Anabaena
variabilis ATCC 29413]
Length = 199
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 95 QSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKS 153
++ GF+ ++DT DGY F YP W+QV+ A G D+ + D + EN+SV +S KS
Sbjct: 42 KAAGFKSFVDTADGYEFLYPNGWLQVKVANGPDVVFHDLIEISENISVVISPVPDD--KS 99
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+++LG P E G K+ + L S R S L +S +G+ YY +E
Sbjct: 100 LKELGTPTEVGYKLGKAALAPPDSGR------SAELVNASEYESEGKTYYHLE 146
>gi|411116287|ref|ZP_11388775.1| PsbP protein [Oscillatoriales cyanobacterium JSC-12]
gi|410713778|gb|EKQ71278.1| PsbP protein [Oscillatoriales cyanobacterium JSC-12]
Length = 180
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
GF+ ++D DGY F YP W++++ G D+ + D ENVSV ++ S KS++D
Sbjct: 26 GFKSFVDAVDGYQFLYPNGWLEIKVSDGPDVVFHDIIEQTENVSVVINPVSGE--KSLKD 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P + G K L++ G RE+ ++S +R DG+ YYL+E
Sbjct: 84 LGDPGQVGYK-----LSKTAIAPPGSGREAELVSAEAREV-DGKQYYLLE 127
>gi|427420263|ref|ZP_18910446.1| CO dehydrogenase/acetyl-CoA synthase beta subunit [Leptolyngbya sp.
PCC 7375]
gi|425762976|gb|EKV03829.1| CO dehydrogenase/acetyl-CoA synthase beta subunit [Leptolyngbya sp.
PCC 7375]
Length = 182
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 97 VGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVE 155
V Y++++ GY F YP W++V+ G D+ + D + ENVSV +S + K++E
Sbjct: 27 VSLLNYVNSYQGYQFSYPTGWLEVKVSGGPDVVFHDIINVTENVSVVVSPVAEG--KTLE 84
Query: 156 DLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+LG P E G K L + +TE G R +++ + D+G++YY++E
Sbjct: 85 ELGGPTEVGYK-LSKSITEMA----GDSRNVELINAQNIETDEGKIYYILE 130
>gi|414079791|ref|YP_007001215.1| photosystem II oxygen evolving complex protein PsbP [Anabaena sp.
90]
gi|413973070|gb|AFW97158.1| photosystem II oxygen evolving complex protein PsbP [Anabaena sp.
90]
Length = 181
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 95 QSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
+ G ++D+ DGY F YP W+QV+ G G D+ + D + ENVSV +S S K+
Sbjct: 24 NAAGLNRFVDSADGYQFDYPNGWLQVKVGDGPDVVFHDLIEVSENVSVVISPVPSG--KT 81
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ +LG P E G K+ + L +G R + +++ + R +G++YY +E
Sbjct: 82 LAELGTPTEVGYKLGKVALAP-----VGSDRTAELINAAEREV-NGKIYYFLE 128
>gi|119513527|ref|ZP_01632547.1| Photosystem II oxygen evolving complex protein PsbP [Nodularia
spumigena CCY9414]
gi|119461816|gb|EAW42833.1| Photosystem II oxygen evolving complex protein PsbP [Nodularia
spumigena CCY9414]
Length = 181
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ GF+ ++D++DGY F YP W+QV+ A G D+ + D + ENVSV +S KS+
Sbjct: 25 AAGFKSFVDSYDGYEFLYPNGWLQVKVANGPDVVFHDLIEISENVSVVISPVPDD--KSL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+LG P E G K+ + L S R S L + +G+ YY++E
Sbjct: 83 AELGTPTEVGYKLAKAALAPPDSGR------SAELVNAFERESNGKTYYILE 128
>gi|427721282|ref|YP_007069276.1| photosystem II oxygen evolving complex protein PsbP [Calothrix sp.
PCC 7507]
gi|427353718|gb|AFY36442.1| photosystem II oxygen evolving complex protein PsbP [Calothrix sp.
PCC 7507]
Length = 181
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 73 MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRD 131
+ALIL + F NT +A + G + +++T DGY F YP W+QV+ A G D+ + D
Sbjct: 5 IALIL--LLVLSFSVSNTDVAIAA-GLKSFVNTIDGYQFLYPNGWVQVKVANGPDVVFHD 61
Query: 132 PYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILST 191
+ ENVSV +S K++ +LG P E G K+ + L S R N L
Sbjct: 62 LIEVSENVSVVISPVPGG--KTLTELGTPTEVGYKLGKVALAPTDSGRTA--ELVNALER 117
Query: 192 SSRVADDGRLYYLVE 206
S DG+ YY++E
Sbjct: 118 ES----DGKKYYILE 128
>gi|443317401|ref|ZP_21046813.1| PsbP [Leptolyngbya sp. PCC 6406]
gi|442783008|gb|ELR92936.1| PsbP [Leptolyngbya sp. PCC 6406]
Length = 196
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAG-ADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y DT+ GY F YP W QV+ AG AD+ + D ENVSV +S+ + ++E
Sbjct: 43 GLKSYADTYTGYQFLYPNGWTQVKVAGAADVVFHDIVNETENVSVVISTVPEDQ--TLEG 100
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P E G K L++ ++ G R+ ++LS + DD + YY++E
Sbjct: 101 LGTPTEVGYK-----LSKSINFLTGDDRKVDLLSAQAITKDD-KTYYILE 144
>gi|186685570|ref|YP_001868766.1| photosystem II oxygen evolving complex protein PsbP [Nostoc
punctiforme PCC 73102]
gi|186468022|gb|ACC83823.1| photosystem II oxygen evolving complex protein PsbP [Nostoc
punctiforme PCC 73102]
Length = 181
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ G + ++DT DGY F YP W+QV+ A G D+ + D + ENVSV +S K++
Sbjct: 25 AAGLKSFVDTSDGYQFLYPNGWLQVKVANGPDVVFHDLIEVSENVSVVISPVPEG--KTL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+LG P E G K+ + L S R S L +++ DG+ YYL+E
Sbjct: 83 SELGTPTEVGYKLGKAALAPPDSGR------SAELVNAAQREVDGKTYYLLE 128
>gi|282897983|ref|ZP_06305978.1| Photosystem II oxygen evolving complex protein PsbP [Raphidiopsis
brookii D9]
gi|281197127|gb|EFA72028.1| Photosystem II oxygen evolving complex protein PsbP [Raphidiopsis
brookii D9]
Length = 199
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ GFR ++DT DGY F YP W+QV+ A G D+ + D + ENVSV +S KS+
Sbjct: 43 AAGFRSFVDTEDGYQFSYPNGWLQVKVANGPDVVFHDLIEVSENVSVVISPVPQG--KSL 100
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+LG P E G K+ + L S R S L ++ +G YY +E
Sbjct: 101 TELGTPTEVGYKLGKSALAPEGSGR------SAELVNVAQKEINGNNYYFLE 146
>gi|282899129|ref|ZP_06307110.1| Photosystem II oxygen evolving complex protein PsbP
[Cylindrospermopsis raciborskii CS-505]
gi|281196045|gb|EFA70961.1| Photosystem II oxygen evolving complex protein PsbP
[Cylindrospermopsis raciborskii CS-505]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ GFR ++DT DGY F YP W+QV+ A G D+ + D + ENVSV +S KS+
Sbjct: 30 AAGFRSFVDTEDGYQFSYPNGWLQVKVANGPDVVFHDLIEVSENVSVVISPVPQG--KSL 87
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+LG P E G K+ + L S R S L ++ +G YY +E +
Sbjct: 88 TELGTPTEVGYKLGKSALAPEGSGR------SAELVNVAQKEINGNNYYFLEYAV 136
>gi|434407469|ref|YP_007150354.1| PsbP [Cylindrospermum stagnale PCC 7417]
gi|428261724|gb|AFZ27674.1| PsbP [Cylindrospermum stagnale PCC 7417]
Length = 181
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ G + ++D+ DGY F YP W+QV+ A G D+ + D + ENVSV +S+ K++
Sbjct: 25 AAGLKSFVDSADGYQFLYPNGWLQVKVANGPDVVFHDLIEVSENVSVVISAAPEG--KTL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+LG P E G ++ + L S R + L + + DG++YYL+E
Sbjct: 83 AELGTPTEVGYRLGKAALAPPDSGR------TAELVNAGQKEVDGKIYYLLE 128
>gi|428301236|ref|YP_007139542.1| photosystem II oxygen evolving complex protein PsbP [Calothrix sp.
PCC 6303]
gi|428237780|gb|AFZ03570.1| photosystem II oxygen evolving complex protein PsbP [Calothrix sp.
PCC 6303]
Length = 192
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 85 FGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVEL 143
FG N A + G +++DT DGY F YP W+QV+ G D+ + D EN+SV +
Sbjct: 26 FGLSNIN-AANAAGLNDFVDTTDGYQFSYPNGWVQVKVSNGPDVVFHDIIEPSENISVVI 84
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
S KS+ +LG P E G K+ + L G R++ +++ R +G+ YY
Sbjct: 85 SPVPGG--KSLVELGTPGEVGYKLGKNALAP-----EGSGRQAELVNAGQREV-EGKQYY 136
Query: 204 LVE 206
+E
Sbjct: 137 KLE 139
>gi|443312253|ref|ZP_21041872.1| PsbP [Synechocystis sp. PCC 7509]
gi|442777723|gb|ELR87997.1| PsbP [Synechocystis sp. PCC 7509]
Length = 181
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 87 FRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSS 145
F T G + Y+D GY F YP W V+ A GAD+ + D + ENVSV +S
Sbjct: 16 FNLTGCVTAGAGLKSYVDAISGYEFLYPNGWQPVKVANGADVVFHDLIEISENVSVVVSP 75
Query: 146 PSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLV 205
++ K++ +LG P E G K+ + + S RE+ +++ +SR G+ YYL+
Sbjct: 76 VANG--KTLAELGTPTEVGYKLSKSAIAPPDSG-----REAELVNAASREV-KGKKYYLL 127
Query: 206 E 206
E
Sbjct: 128 E 128
>gi|298489692|ref|YP_003719869.1| photosystem II oxygen evolving complex protein PsbP ['Nostoc
azollae' 0708]
gi|298231610|gb|ADI62746.1| photosystem II oxygen evolving complex protein PsbP ['Nostoc
azollae' 0708]
Length = 181
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 69 RRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADI 127
+R A+ L+L +FS N ++A + G + +ID+ DGY F YP W+QV+ A G D+
Sbjct: 3 KRIALILVL---VFS-ISLSNPSVAN-AYGLKSFIDSADGYQFLYPNGWLQVKVANGPDV 57
Query: 128 FYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESN 187
+ D + ENVSV +S R ++ +LG P E G + + L S R S
Sbjct: 58 VFHDLIEVSENVSVVISPVPDGR--TLTELGTPTEVGYNLGKSALAPVDSGR------SA 109
Query: 188 ILSTSSRVADDGRLYYLVE 206
L + DG+ YY++E
Sbjct: 110 ELINVGQKEVDGKTYYVLE 128
>gi|434388488|ref|YP_007099099.1| PsbP [Chamaesiphon minutus PCC 6605]
gi|428019478|gb|AFY95572.1| PsbP [Chamaesiphon minutus PCC 6605]
Length = 181
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 95 QSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELSSPSSSRYKS 153
++ G + Y+DT DGY F YP W+ V+ GADI + D ENVSV +S + K
Sbjct: 25 EAAGLQGYVDTGDGYKFLYPNGWVAVKTTKGADIIFHDLIESSENVSVVIS--QVDKDKK 82
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ DLG + G K+ + + G RE+ ++S + A G+ YY++E
Sbjct: 83 LSDLGTASDVGYKLGKNAIAP-----PGSGREAELISAETHEA-KGKTYYILE 129
>gi|427735100|ref|YP_007054644.1| PsbP [Rivularia sp. PCC 7116]
gi|427370141|gb|AFY54097.1| PsbP [Rivularia sp. PCC 7116]
Length = 182
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ Y D+ DGY F YP W++++ G D+ + D ENVSV +S S KS+
Sbjct: 25 AAALNSYSDSTDGYQFLYPAGWVEIQISKGPDVVFHDIIETTENVSVVISPVPSG--KSL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+LG P E G K+ + L G R++ +++ +DG+ YYL+E
Sbjct: 83 TELGTPTEVGYKLGKNALAP-----EGSNRKAELVNAEQTEGEDGKTYYLLE 129
>gi|409991886|ref|ZP_11275111.1| photosystem II oxygen evolving complex protein PsbP [Arthrospira
platensis str. Paraca]
gi|291568093|dbj|BAI90365.1| photosystem II oxygen-evolving complex protein PsbP [Arthrospira
platensis NIES-39]
gi|409937256|gb|EKN78695.1| photosystem II oxygen evolving complex protein PsbP [Arthrospira
platensis str. Paraca]
Length = 180
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + ++DT DGY F YP W++VR G D+ + D ENVSV +SS +R S+E+
Sbjct: 26 GLKSFVDTADGYEFLYPNGWVEVRVSNGPDVVFHDMIDSTENVSVVISSV--TRGDSLEE 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+G P E G + + + G R + +L+ R + + YYL+E
Sbjct: 84 IGTPTEVGYTLSKNAIAP-----EGSGRTAELLNAGKRESTN-NTYYLLE 127
>gi|434392011|ref|YP_007126958.1| photosystem II oxygen evolving complex protein PsbP [Gloeocapsa sp.
PCC 7428]
gi|428263852|gb|AFZ29798.1| photosystem II oxygen evolving complex protein PsbP [Gloeocapsa sp.
PCC 7428]
Length = 180
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 85 FGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVEL 143
F T+ + G + Y+D+ DGY F YP W+ V G D+ D ENVSV +
Sbjct: 13 FSVSLTSCSSAVSGLKSYVDSTDGYEFLYPNGWVPVNVSNGPDVVLHDLIETTENVSVVI 72
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
S + K++ DLG P E G K+ + + S RE+ +++ + +A D + YY
Sbjct: 73 S--DVPQGKTLADLGSPSEVGYKLGKSAIAPPES-----GREAELVN-AEELATDAKTYY 124
Query: 204 LVE 206
L+E
Sbjct: 125 LLE 127
>gi|428312301|ref|YP_007123278.1| PsbP [Microcoleus sp. PCC 7113]
gi|428253913|gb|AFZ19872.1| PsbP [Microcoleus sp. PCC 7113]
Length = 179
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y+D+ DGY F YP W+ ++ G DI +RD ENVSV S + K+++D
Sbjct: 26 GLKSYVDSTDGYEFLYPNGWVPIQVTTGPDIVFRDLVEQTENVSVIFS--EVPKGKTLQD 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P E G ++ + + S R++ +++ +R + D + YYL+E
Sbjct: 84 LGTPGEVGYQLQKNAIAPPNSG-----RQAELVNAEARESGD-KTYYLLE 127
>gi|218247324|ref|YP_002372695.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8801]
gi|257061341|ref|YP_003139229.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8802]
gi|218167802|gb|ACK66539.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8801]
gi|256591507|gb|ACV02394.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8802]
Length = 183
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR----GAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
+ YID+ DGY F YP+ WI+V G D+ +RD EN+SV +S + K+
Sbjct: 26 ALQSYIDSRDGYQFLYPKGWIEVTVKNASEGVDVVFRDLIEQTENLSVIISQVPDN--KT 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTS-SRVADDGRLYYLVE 206
+ DLG P E G ++L++ M+ R++++++ S +AD + YY++E
Sbjct: 84 LADLGTPTEVGYRLLQE-----MNQNPDSNRKADLINAEVSEIAD--KTYYILE 130
>gi|300864079|ref|ZP_07108979.1| photosystem II oxygen evolving complex protein PsbP [Oscillatoria
sp. PCC 6506]
gi|300337958|emb|CBN54125.1| photosystem II oxygen evolving complex protein PsbP [Oscillatoria
sp. PCC 6506]
Length = 179
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 85 FGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVEL 143
F F T+ G + YIDT DGY F YP W + G D+ +RD ENVSV +
Sbjct: 13 FSFTLTSCVSTVSGLKSYIDTADGYQFLYPNGWTALNVSNGPDVVFRDLIEQTENVSVVI 72
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
S S K++ DLG P E G ++ + + S RE+ +++ +R + YY
Sbjct: 73 SEVPSG--KTLADLGTPSEVGYRLSKSAIAPPNSG-----REAELVNAEAR-ESRTKSYY 124
Query: 204 LVE 206
++E
Sbjct: 125 ILE 127
>gi|209524880|ref|ZP_03273426.1| photosystem II oxygen evolving complex protein PsbP [Arthrospira
maxima CS-328]
gi|376007637|ref|ZP_09784829.1| Photosystem II oxygen-evolving complex 23K protein [Arthrospira sp.
PCC 8005]
gi|423063070|ref|ZP_17051860.1| photosystem II oxygen evolving complex protein PsbP [Arthrospira
platensis C1]
gi|209494759|gb|EDZ95068.1| photosystem II oxygen evolving complex protein PsbP [Arthrospira
maxima CS-328]
gi|375323957|emb|CCE20582.1| Photosystem II oxygen-evolving complex 23K protein [Arthrospira sp.
PCC 8005]
gi|406715192|gb|EKD10348.1| photosystem II oxygen evolving complex protein PsbP [Arthrospira
platensis C1]
Length = 180
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + ++DT DGY F YP W++VR G D+ + D ENVSV +SS +R S+E+
Sbjct: 26 GLKSFVDTADGYEFLYPNGWVEVRVSNGPDVVFHDMIDSTENVSVVISSV--TRGDSLEE 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+G P E G + + + G R + +++ R + + YYL+E
Sbjct: 84 IGTPTEVGYTLSKNAIAP-----EGSGRTAELVNAGKRESTN-NTYYLLE 127
>gi|449457309|ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
Length = 383
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA + HQ FS+L S+LS FNGA LH+QV+ +++ P+ LHVTAS +K +M
Sbjct: 4 MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
Query: 61 AATQF 65
T+F
Sbjct: 64 GGTRF 68
>gi|428213016|ref|YP_007086160.1| PsbP [Oscillatoria acuminata PCC 6304]
gi|428001397|gb|AFY82240.1| PsbP [Oscillatoria acuminata PCC 6304]
Length = 180
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + +ID+ DGY F YP W+ V+ G D+ Y D ENVSV +S K++ +
Sbjct: 27 GLKSHIDSTDGYEFLYPNGWVPVKVNKGPDVVYHDLIETRENVSVVISPVQDG--KTLSE 84
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P E G K+ + + G RE+ +++ R + YYL+E
Sbjct: 85 LGTPSEVGYKLSKNAIAP-----PGSGREAELINAEQR-EKGSKTYYLLE 128
>gi|254415923|ref|ZP_05029680.1| PsbP [Coleofasciculus chthonoplastes PCC 7420]
gi|196177350|gb|EDX72357.1| PsbP [Coleofasciculus chthonoplastes PCC 7420]
Length = 179
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSS-PSSSRYKSVE 155
G + Y+DT DGY F YP W+ ++ G D+ +RD ENVSV ++ P ++ ++
Sbjct: 26 GLKSYVDTADGYEFLYPNGWVPIKVTDGPDVVFRDLIEQTENVSVVINPVPENT---TLT 82
Query: 156 DLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
DLG P E G ++ + L+ S R+ ++ +R D + YYL+E S
Sbjct: 83 DLGTPGEVGYQLQQNVLSAANS-----NRQVELVDAKARDTGD-KTYYLLEYSV 130
>gi|427711315|ref|YP_007059939.1| PsbP [Synechococcus sp. PCC 6312]
gi|427375444|gb|AFY59396.1| PsbP [Synechococcus sp. PCC 6312]
Length = 195
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAG-ADIFYRDPYVLDENVSVELSSPSSSRY 151
A + G + Y+D+ DGY F YP W+QV +G AD+ + D ENVSV +S SS+
Sbjct: 32 ANAATGLQAYVDSIDGYEFLYPTGWVQVDVSGNADVVFHDIIQTSENVSVVVSQTSSN-- 89
Query: 152 KSVEDLGPPKEAGRKVLRQYLTEFMSTR 179
K++ DLG P+E G+++LR + S R
Sbjct: 90 KTLTDLGSPEEVGQRLLRNVIAPQESGR 117
>gi|220908009|ref|YP_002483320.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 7425]
gi|219864620|gb|ACL44959.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 7425]
Length = 183
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y+D+ DGY F YP W+ V+ +GAD+ +RD ENVSV +S S +S+ D
Sbjct: 25 GLKVYVDSIDGYEFAYPNGWVAVQVSSGADVVFRDLIQTTENVSVVVSQVSGE--QSLAD 82
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYL 204
LG P+E G+++ ++ + S R+++++S +SR D Y L
Sbjct: 83 LGKPEEVGQRLAQRVIAPPESG-----RQADLISATSRQTDHQTYYNL 125
>gi|334121484|ref|ZP_08495552.1| photosystem II oxygen evolving complex protein PsbP [Microcoleus
vaginatus FGP-2]
gi|333455003|gb|EGK83670.1| photosystem II oxygen evolving complex protein PsbP [Microcoleus
vaginatus FGP-2]
Length = 180
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 92 LAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSR 150
++ + G + Y+DT DGY F YP W+ + G D+ +RD ENVSV +S + ++
Sbjct: 21 VSSKGTGLKSYVDTGDGYQFLYPNGWLPIAVSNGPDVVFRDLIQQTENVSVVIS--TVAK 78
Query: 151 YKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K++ DLG P + G K+ + + S RE+ +++ +R + YY++E
Sbjct: 79 DKTLADLGTPTDVGYKLSKSAIAPSDSG-----REAELVNAEAR-ESRSKNYYILE 128
>gi|126660268|ref|ZP_01731383.1| hypothetical protein CY0110_15405 [Cyanothece sp. CCY0110]
gi|126618443|gb|EAZ89197.1| hypothetical protein CY0110_15405 [Cyanothece sp. CCY0110]
Length = 183
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV----RGAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y+D DGY F YP W+ V G D+ +RD EN+SV +S + K+
Sbjct: 26 GLQSYVDAGDGYQFLYPNGWVGVDVKQSSQGVDVIFRDIIEPSENLSVIVSDV--DKEKT 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ +LG P E G +L+Q M+ R+ ++++ SR +G+ YY +E
Sbjct: 84 LSELGTPTEVGYYLLKQ-----MNNNEDNDRKVDLINAESREV-EGKTYYNLE 130
>gi|428772022|ref|YP_007163810.1| photosystem II oxygen evolving complex protein PsbP [Cyanobacterium
stanieri PCC 7202]
gi|428686301|gb|AFZ46161.1| photosystem II oxygen evolving complex protein PsbP [Cyanobacterium
stanieri PCC 7202]
Length = 185
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNW--IQVRGA--GADIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y D DGY F YP W ++V+ A G D+ YRD EN+SV +S + + K
Sbjct: 26 GLQRYTDAIDGYQFLYPNGWMPVEVQNASDGVDVVYRDFIERTENLSVIISEVNEN--KD 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ DLG P + G + ++ ++ R + ++S R DG+ YY++E
Sbjct: 84 LSDLGSPTDVGYRFMK-----MVNQNQDSGRNAELISADKREV-DGKDYYILE 130
>gi|428319548|ref|YP_007117430.1| photosystem II oxygen evolving complex protein PsbP [Oscillatoria
nigro-viridis PCC 7112]
gi|428243228|gb|AFZ09014.1| photosystem II oxygen evolving complex protein PsbP [Oscillatoria
nigro-viridis PCC 7112]
Length = 179
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y+DT DGY F YP W+ + G D+ +RD ENVSV +S S K++ D
Sbjct: 26 GLKSYVDTGDGYQFLYPNGWLPIAVSNGPDVVFRDLIQQTENVSVVISPVSEG--KTLAD 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P + G K+ + + S RE+ +++ +R + YY++E
Sbjct: 84 LGSPTDVGYKLSKSAIAPADSG-----REAELVNAEAR-ESRSKSYYILE 127
>gi|428304586|ref|YP_007141411.1| photosystem II oxygen evolving complex protein PsbP [Crinalium
epipsammum PCC 9333]
gi|428246121|gb|AFZ11901.1| photosystem II oxygen evolving complex protein PsbP [Crinalium
epipsammum PCC 9333]
Length = 181
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
GF+ Y DT D Y F YP W+ V+ GADI + D ENVSV +S SR K++ D
Sbjct: 28 GFQRYEDTTDSYRFFYPNGWVAVKVKNGADIVFHDIIEPTENVSVVIS--PVSRDKNLAD 85
Query: 157 LGPPKEAGRKV 167
LG P E G K+
Sbjct: 86 LGTPGEVGYKL 96
>gi|16330611|ref|NP_441339.1| hypothetical protein sll1418 [Synechocystis sp. PCC 6803]
gi|383322352|ref|YP_005383205.1| hypothetical protein SYNGTI_1443 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325521|ref|YP_005386374.1| hypothetical protein SYNPCCP_1442 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491405|ref|YP_005409081.1| hypothetical protein SYNPCCN_1442 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436672|ref|YP_005651396.1| hypothetical protein SYNGTS_1443 [Synechocystis sp. PCC 6803]
gi|451814769|ref|YP_007451221.1| hypothetical protein MYO_114560 [Synechocystis sp. PCC 6803]
gi|1653103|dbj|BAA18019.1| sll1418 [Synechocystis sp. PCC 6803]
gi|339273704|dbj|BAK50191.1| hypothetical protein SYNGTS_1443 [Synechocystis sp. PCC 6803]
gi|359271671|dbj|BAL29190.1| hypothetical protein SYNGTI_1443 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274841|dbj|BAL32359.1| hypothetical protein SYNPCCN_1442 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278011|dbj|BAL35528.1| hypothetical protein SYNPCCP_1442 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451780738|gb|AGF51707.1| hypothetical protein MYO_114560 [Synechocystis sp. PCC 6803]
Length = 188
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 16/140 (11%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWI--QVRGA--GAD 126
+ A++L + + S F TA + + Y DT DGY F YP WI V+GA G D
Sbjct: 7 STAVVLVTLLLS---FTLTACGGVGIASLQRYSDTKDGYEFLYPNGWIGVDVKGASPGVD 63
Query: 127 IFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRES 186
+ +RD DEN+SV +S S K++ DLG + G + ++ ++ R++
Sbjct: 64 VVFRDLIERDENLSVIISEIPSD--KTLTDLGTATDVGYRFMKT-----VNDASQGDRQA 116
Query: 187 NILSTSSRVADDGRLYYLVE 206
+++ +R +DG++YY +E
Sbjct: 117 ELINAEAR-DEDGQVYYTLE 135
>gi|119492446|ref|ZP_01623767.1| Photosystem II oxygen evolving complex protein PsbP [Lyngbya sp.
PCC 8106]
gi|119453112|gb|EAW34281.1| Photosystem II oxygen evolving complex protein PsbP [Lyngbya sp.
PCC 8106]
Length = 180
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ G ++DT DGY F YP W+QV G D+ + D ENVSV +S + K++
Sbjct: 25 AAGLNSFVDTTDGYEFLYPNGWVQVNVSDGPDVVFHDMIEQTENVSVVISPIPDN--KTL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+++G P + G K+ + + G R + +++ SR + + YYL+E
Sbjct: 83 DEIGTPTDVGYKLSKNAIAP-----PGSGRSAELVNAESRQKGE-KTYYLLE 128
>gi|172035720|ref|YP_001802221.1| photosystem II oxygen evolving complex protein PsbP, 23 kD
extrinsic protein [Cyanothece sp. ATCC 51142]
gi|354554960|ref|ZP_08974263.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
ATCC 51472]
gi|171697174|gb|ACB50155.1| photosystem II oxygen evolving complex protein PsbP, 23 kD
extrinsic protein [Cyanothece sp. ATCC 51142]
gi|353553114|gb|EHC22507.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
ATCC 51472]
Length = 183
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV----RGAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y+D+ DGY F YP W+ V G D+ +RD EN+SV +S K+
Sbjct: 26 GLQSYVDSADGYQFLYPNGWVGVDVKQSSQGVDVIFRDLIEPTENLSVIVSDVDEE--KT 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ LG P E G +L+Q M+ R+ ++++ SR +G+ YY +E
Sbjct: 84 LTALGTPTEVGYYLLKQ-----MNNNKNNGRKVDLINAESREV-EGKTYYNLE 130
>gi|407958537|dbj|BAM51777.1| hypothetical protein BEST7613_2846 [Bacillus subtilis BEST7613]
Length = 196
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 16/140 (11%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVG-FREYIDTFDGYSFKYPQNWI--QVRGA--GAD 126
+ A++L + + S F TA + + Y DT DGY F YP WI V+GA G D
Sbjct: 15 STAVVLVTLLLS---FTLTACGGVGIASLQRYSDTKDGYEFLYPNGWIGVDVKGASPGVD 71
Query: 127 IFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRES 186
+ +RD DEN+SV +S S K++ DLG + G + ++ ++ R++
Sbjct: 72 VVFRDLIERDENLSVIISEIPSD--KTLTDLGTATDVGYRFMKT-----VNDASQGDRQA 124
Query: 187 NILSTSSRVADDGRLYYLVE 206
+++ +R +DG++YY +E
Sbjct: 125 ELINAEAR-DEDGQVYYTLE 143
>gi|115482366|ref|NP_001064776.1| Os10g0461100 [Oryza sativa Japonica Group]
gi|110289195|gb|ABG66116.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
gi|113639385|dbj|BAF26690.1| Os10g0461100 [Oryza sativa Japonica Group]
Length = 537
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 70 RNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFY 129
R M L + +F + A+ GF D DGYSF YP W +V G D Y
Sbjct: 343 RRRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVY 402
Query: 130 RDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNI 188
+D E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 403 KDVIEPLESVSVN-TIPTSK--QDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV 459
Query: 189 LSTSSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 460 ---------DGRTYYTFEFTA 471
>gi|110289198|gb|ABG66119.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 536
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 70 RNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFY 129
R M L + +F + A+ GF D DGYSF YP W +V G D Y
Sbjct: 342 RRRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVY 401
Query: 130 RDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNI 188
+D E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 402 KDVIEPLESVSVN-TIPTSK--QDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV 458
Query: 189 LSTSSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 459 ---------DGRTYYTFEFTA 470
>gi|110289196|gb|ABG66117.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
gi|215701443|dbj|BAG92867.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215769320|dbj|BAH01549.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 70 RNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFY 129
R M L + +F + A+ GF D DGYSF YP W +V G D Y
Sbjct: 343 RRRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVY 402
Query: 130 RDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNI 188
+D E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 403 KDVIEPLESVSVN-TIPTSK--QDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV 459
Query: 189 LSTSSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 460 ---------DGRTYYTFEFTA 471
>gi|428776864|ref|YP_007168651.1| photosystem II oxygen evolving complex protein PsbP [Halothece sp.
PCC 7418]
gi|428691143|gb|AFZ44437.1| photosystem II oxygen evolving complex protein PsbP [Halothece sp.
PCC 7418]
Length = 182
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR----GAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y ++ +GY F YP W +V+ AG D+ +RD ENVSV ++ R
Sbjct: 26 GLQGYTNSTEGYQFLYPNGWQEVKVDNNTAGVDVVFRDLVEQSENVSVVINQVGEDR--K 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWC- 212
++DLG P + G++ L+ + S R G L + + DG+ YYL+E +
Sbjct: 84 LQDLGTPSDVGQR-LKNTIAPPNSDRKGE------LLRADELEKDGQTYYLLEYQVTFPD 136
Query: 213 ----WNITQLLVTR--IFILSL 228
N+ + V+R +F LS+
Sbjct: 137 QRQRHNVASVAVSRGKLFTLSV 158
>gi|428216461|ref|YP_007100926.1| photosystem II oxygen evolving complex protein PsbP [Pseudanabaena
sp. PCC 7367]
gi|427988243|gb|AFY68498.1| photosystem II oxygen evolving complex protein PsbP [Pseudanabaena
sp. PCC 7367]
Length = 180
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 90 TALAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSS 148
+ ++ G Y D+ DGYSF YP W++ R G DI + D E+VSV +S S
Sbjct: 18 SGCVSKAGGLVPYNDSKDGYSFLYPNGWLETRVPGGPDILFHDLIEQSESVSVIISGLKS 77
Query: 149 SRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ + ++G K+ G K+ M G RE+ ++ R A+D + YYL+E
Sbjct: 78 VNH--LTEIGSAKDVGEKIKTN-----MIALPGTDREAKLVRAQQREAND-KTYYLLE 127
>gi|218201012|gb|EEC83439.1| hypothetical protein OsI_28915 [Oryza sativa Indica Group]
Length = 244
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D Y+D E+VSV + P+S +
Sbjct: 87 AEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVIEPLESVSVN-TIPTSKQ-- 143
Query: 153 SVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ +LGPP + ++R+ L T+L +E+++ DGR YY E +
Sbjct: 144 DIRELGPPDQVAEALIRKVLAAPTQKTKLMEAKENDV---------DGRTYYTFEFTA 192
>gi|110289197|gb|ABG66118.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 323
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 70 RNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFY 129
R M L + +F + A+ GF D DGYSF YP W +V G D Y
Sbjct: 143 RRRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVY 202
Query: 130 RDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNI 188
+D E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 203 KDVIEPLESVSVN-TIPTSK--QDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV 259
Query: 189 LSTSSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 260 ---------DGRTYYTFEFTA 271
>gi|303277077|ref|XP_003057832.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460489|gb|EEH57783.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 221
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 69 RRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIF 128
RR A +LS+ S N A GF DT DGY F YP W ++ G D
Sbjct: 44 RRQA---VLSTAALSASLLTNAKPAHALSGFSVVKDTRDGYQFYYPVGWQEISVDGQDAV 100
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
Y+D V++ SV L+ + R +S+ D+G P E ++ + L + ++ +
Sbjct: 101 YKD--VIEPLESVALNIYPTQR-ESLTDIGSPDEVANTLVGKALAVPGA-------QAKV 150
Query: 189 LSTSSRVADDGRLYYLVE 206
L T+ R DG LYY +E
Sbjct: 151 LKTAQRKDKDGHLYYFLE 168
>gi|390136096|pdb|2LNJ|A Chain A, Solution Structure Of Cyanobacterial Psbp (Cyanop) From
Synechocystis Sp. Pcc 6803
Length = 170
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 99 FREYIDTFDGYSFKYPQNWI--QVRGA--GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ Y DT DGY F YP WI V+GA G D+ +RD DEN+SV +S S K++
Sbjct: 14 LQRYSDTKDGYEFLYPNGWIGVDVKGASPGVDVVFRDLIERDENLSVIISEIPSD--KTL 71
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG + G + ++ R++ +++ +R +DG++YY +E
Sbjct: 72 TDLGTATDVGYRFMKTVNDASQGD-----RQAELINAEAR-DEDGQVYYTLE 117
>gi|222640410|gb|EEE68542.1| hypothetical protein OsJ_27001 [Oryza sativa Japonica Group]
Length = 244
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D Y+D E+VSV + P+S +
Sbjct: 87 AEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVIEPLESVSVN-TIPTSKQ-- 143
Query: 153 SVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ +LGPP + ++R+ L T+L +E+++ DGR YY E +
Sbjct: 144 DIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV---------DGRTYYTFEFTA 192
>gi|110289199|gb|AAP54144.2| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 352
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 70 RNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFY 129
R M L + +F + A+ GF D DGYSF YP W +V G D Y
Sbjct: 156 RRRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVY 215
Query: 130 RDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNI 188
+D E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 216 KDVIEPLESVSVN-TIPTSK--QDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV 272
Query: 189 LSTSSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 273 ---------DGRTYYTFEFTA 284
>gi|425457013|ref|ZP_18836719.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
gi|389801727|emb|CCI19132.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
Length = 182
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F TA A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TACATPIAGLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|428203745|ref|YP_007082334.1| PsbP [Pleurocapsa sp. PCC 7327]
gi|427981177|gb|AFY78777.1| PsbP [Pleurocapsa sp. PCC 7327]
Length = 183
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 91 ALAQQSVG---FREYIDTFDGYSFKYPQNWIQVRGAGA----DIFYRDPYVLDENVSVEL 143
L+ SVG + Y + GY F YP WI+V A D+ +RD EN+SV +
Sbjct: 16 TLSGCSVGISNLQHYANAVKGYEFFYPNGWIEVNIQNASEEVDVVFRDLIQRTENLSVII 75
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
SS + K++ DLG P + G + L+Q ++ RE+ ++ +R +G+ YY
Sbjct: 76 SSVPEN--KTLTDLGTPTDVGYRFLKQ-----VNNNPNANREAELIKAEAR-ESNGKTYY 127
Query: 204 LVE 206
+E
Sbjct: 128 TLE 130
>gi|443646837|ref|ZP_21129515.1| psbP protein [Microcystis aeruginosa DIANCHI905]
gi|159028863|emb|CAO90668.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335666|gb|ELS50130.1| psbP protein [Microcystis aeruginosa DIANCHI905]
Length = 182
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F TA A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TACATPIAGLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|425448156|ref|ZP_18828135.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
gi|389731137|emb|CCI04772.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
Length = 182
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F TA A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TACATPIAGLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|390441645|ref|ZP_10229687.1| Genome sequencing data, contig C315 [Microcystis sp. T1-4]
gi|389835063|emb|CCI33813.1| Genome sequencing data, contig C315 [Microcystis sp. T1-4]
Length = 182
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F TA A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TACATPIAGLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|38636895|dbj|BAD03159.1| oxygen evolving complex protein-like [Oryza sativa Japonica Group]
Length = 257
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D Y+D E+VSV + P+S +
Sbjct: 87 AEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVIEPLESVSVN-TIPTSK--Q 143
Query: 153 SVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ +LGPP + ++R+ L T+L +E+++ DGR YY E +
Sbjct: 144 DIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV---------DGRTYYTFEFTA 192
>gi|297843724|ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335585|gb|EFH66002.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA+M+M+Q Q P FS+LTS+LS FNGA LH QV+ +++ P+ ALHV+AS+EKK +M
Sbjct: 1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALHVSASSEKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|22165105|gb|AAM93722.1| putative oxygen evolving complex protein [Oryza sativa Japonica
Group]
gi|22165114|gb|AAM93731.1| putative oxygen evolving complex protein [Oryza sativa Japonica
Group]
Length = 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 73 MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDP 132
M L + +F + A+ GF D DGYSF YP W +V G D Y+D
Sbjct: 1 MLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDV 60
Query: 133 YVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNILST 191
E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 61 IEPLESVSVN-TIPTSKQ--DIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV--- 114
Query: 192 SSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 115 ------DGRTYYTFEFTA 126
>gi|125532246|gb|EAY78811.1| hypothetical protein OsI_33914 [Oryza sativa Indica Group]
gi|125575051|gb|EAZ16335.1| hypothetical protein OsJ_31797 [Oryza sativa Japonica Group]
Length = 194
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 73 MALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDP 132
M L + +F + A+ GF D DGYSF YP W +V G D Y+D
Sbjct: 1 MLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDV 60
Query: 133 YVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNILST 191
E+VSV + P+S + + +LGPP + ++R+ L T+L +E+++
Sbjct: 61 IEPLESVSVN-TIPTSKQ--DIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDV--- 114
Query: 192 SSRVADDGRLYYLVEVSC 209
DGR YY E +
Sbjct: 115 ------DGRTYYTFEFTA 126
>gi|443475034|ref|ZP_21064996.1| photosystem II oxygen evolving complex protein PsbP [Pseudanabaena
biceps PCC 7429]
gi|443020162|gb|ELS34153.1| photosystem II oxygen evolving complex protein PsbP [Pseudanabaena
biceps PCC 7429]
Length = 182
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 87 FRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGA-DIFYRDPYVLDENVSVELSS 145
F + + + G + D+ DGY F YP W + +G A DI + D ENVSV +S
Sbjct: 16 FLTSCASTPTSGLVPFADSKDGYRFLYPNGWTETKGNSAIDILFHDIIEPSENVSVAISK 75
Query: 146 PSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLV 205
+ KS+E++G P+ G + L E + G R++ +LS + + + D R YY
Sbjct: 76 LET--VKSLEEIGNPEAIGLR-----LKERVVAPEGSGRQAKLLSATQKESGD-RNYYTF 127
Query: 206 E 206
E
Sbjct: 128 E 128
>gi|428206738|ref|YP_007091091.1| photosystem II oxygen evolving complex protein PsbP
[Chroococcidiopsis thermalis PCC 7203]
gi|428008659|gb|AFY87222.1| photosystem II oxygen evolving complex protein PsbP
[Chroococcidiopsis thermalis PCC 7203]
Length = 181
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 96 SVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ G + ++D+ DGY F YP W+ V+ G DI D EN SV + S + K++
Sbjct: 25 TAGLKSFVDSVDGYEFLYPNGWLPVKVTDGPDIVLHDLIETTENASVVIGSIADG--KTL 82
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P + G K+ + + S RE+ +++ + +G+ YY++E
Sbjct: 83 ADLGTPGDVGYKLGKSAIAPPDSG-----REAELVNAGQQ-DYNGKTYYILE 128
>gi|332705273|ref|ZP_08425354.1| PsbP [Moorea producens 3L]
gi|332356016|gb|EGJ35475.1| PsbP [Moorea producens 3L]
Length = 184
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + Y+D+ +GY F YP W+ ++ G D+ + D ENVSV +S KS+ D
Sbjct: 30 GLQSYVDSLNGYQFLYPNGWVPIKVTDGPDVVFHDIIETTENVSVVISPVPEG--KSLAD 87
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSR-VADDGRLYYLVE 206
LG P E G ++ + + S R + +++ +R VA+ + YYL+E
Sbjct: 88 LGTPSEVGYQLQKNAIAPPDSGRT-----AELVNAEAREVAE--KTYYLLE 131
>gi|428223927|ref|YP_007108024.1| photosystem II oxygen evolving complex protein PsbP [Geitlerinema
sp. PCC 7407]
gi|427983828|gb|AFY64972.1| photosystem II oxygen evolving complex protein PsbP [Geitlerinema
sp. PCC 7407]
Length = 179
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G Y++T GY F YP W+ V+ G D+ + D ENVSV ++ ++++D
Sbjct: 26 GLNSYVNTNKGYEFLYPTGWVSVKVSGGPDVVFHDLIEETENVSVVINPVEEG--QTLQD 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
LG P E G+++ + ++ S G R++ +++ +R G YYL+E
Sbjct: 84 LGTPSELGQRLAQSIIS---SVEAG--RKAELVNAEAR-ESQGITYYLLE 127
>gi|226491834|ref|NP_001147590.1| chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa
protein [Zea mays]
gi|195612378|gb|ACG28019.1| chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa
protein [Zea mays]
gi|238006362|gb|ACR34216.1| unknown [Zea mays]
gi|414864456|tpg|DAA43013.1| TPA: chloroplast oxygen-evolving complex/thylakoid lumenal protein
[Zea mays]
Length = 242
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF +D GYSF YP W +V G D Y+D E+VSV S P+S +
Sbjct: 85 AEAKKGFLPVVDKKAGYSFLYPFGWEEVAVQGQDKVYKDVIEPLESVSVN-SIPTSK--E 141
Query: 153 SVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ DLGPP + ++++ L T+L +E+++ DGR YY E
Sbjct: 142 DIRDLGPPDKVAEALIKKVLAPSTQKTKLIEAKENDV---------DGRAYYTFE 187
>gi|67924039|ref|ZP_00517489.1| Photosystem II reaction center protein PsbP [Crocosphaera watsonii
WH 8501]
gi|416401306|ref|ZP_11687210.1| Photosystem II oxygen evolving complex protein PsbP [Crocosphaera
watsonii WH 0003]
gi|67854106|gb|EAM49415.1| Photosystem II reaction center protein PsbP [Crocosphaera watsonii
WH 8501]
gi|357262075|gb|EHJ11266.1| Photosystem II oxygen evolving complex protein PsbP [Crocosphaera
watsonii WH 0003]
Length = 183
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNW----IQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y+D DGY F YP W ++ G D+ +RD EN+SV +S + K+
Sbjct: 26 GLQSYVDAADGYQFLYPNGWAGVDVKQSSQGLDVVFRDIIEESENLSVIVSDV--DKEKT 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ LG P E G YL + ++ + RE ++++ SR +G+ YY +E
Sbjct: 84 LASLGTPTEVG-----YYLLKRINNDVENDREVDLINAESREL-EGKTYYKLE 130
>gi|440751819|ref|ZP_20931022.1| psbP protein [Microcystis aeruginosa TAIHU98]
gi|440176312|gb|ELP55585.1| psbP protein [Microcystis aeruginosa TAIHU98]
Length = 182
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F T A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TGCATPIAGLQGYTSGSQGYQFLYPKGWTQVEVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|242037137|ref|XP_002465963.1| hypothetical protein SORBIDRAFT_01g049040 [Sorghum bicolor]
gi|241919817|gb|EER92961.1| hypothetical protein SORBIDRAFT_01g049040 [Sorghum bicolor]
Length = 242
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF +D GYSF YP W +V G D Y+D E+VSV S P+S +
Sbjct: 85 AEAKKGFLPVVDKKAGYSFLYPFGWEEVAVQGQDKVYKDVIEPLESVSVN-SIPTSK--E 141
Query: 153 SVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ DLGPP + ++++ L T+L +E+++ DGR YY E +
Sbjct: 142 DIRDLGPPDKVAEALIKKVLAPPTQKTKLIEAKENDV---------DGRAYYTFEFTA 190
>gi|113474070|ref|YP_720131.1| photosystem II oxygen evolving complex protein PsbP [Trichodesmium
erythraeum IMS101]
gi|110165118|gb|ABG49658.1| photosystem II oxygen evolving complex protein PsbP [Trichodesmium
erythraeum IMS101]
Length = 180
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVED 156
G + ++DT DGY F YP WI+V+ G D+ + D ENVSV +S K++ D
Sbjct: 26 GLQSFVDTTDGYEFLYPNGWIEVKVSDGPDVVFHDLVEATENVSVVISPMVEE--KTLSD 83
Query: 157 LGPPKEAGRKVLRQYLTEFMSTR 179
LG P + G ++ + + S R
Sbjct: 84 LGTPTDVGYRLSKNAIAPKDSGR 106
>gi|428222551|ref|YP_007106721.1| PsbP [Synechococcus sp. PCC 7502]
gi|427995891|gb|AFY74586.1| PsbP [Synechococcus sp. PCC 7502]
Length = 180
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 85 FGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVEL 143
F + Q+ G ++D+ DGYSF +P W+Q G D+ + D ENVSV +
Sbjct: 13 FSLSLSGCVTQTSGLAPFVDSRDGYSFLHPNGWLQKSVVNGPDVVFHDIVEPSENVSVVI 72
Query: 144 SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYY 203
S K++ED+G P++ G ++ + + ++ + N +G+ YY
Sbjct: 73 GKLKS--VKTLEDIGTPQDIGLRIQEKVIGSPNASLISAETYQN----------NGKPYY 120
Query: 204 LVE 206
L+E
Sbjct: 121 LLE 123
>gi|425450206|ref|ZP_18830038.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
gi|389769062|emb|CCI05990.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
Length = 182
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F T A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TGCATPIAGLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|425434490|ref|ZP_18814959.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
gi|389676034|emb|CCH94906.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
Length = 182
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 72 AMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV---RGAGADIF 128
A L++++ +F T A G + Y GY F YP+ W QV + AG D+
Sbjct: 7 ATFLLITTLLF-------TGCATPIAGLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVV 59
Query: 129 YRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNI 188
+ D EN+SV ++ + K++ DLG P E G ++L+ S + +E +
Sbjct: 60 FHDLIETSENLSVIINPVPDN--KTLTDLGTPSEVGYRLLKN-----NSLNPNLDKEVEL 112
Query: 189 LSTSSRVADDGRLYYLVE 206
+ + S DG+ YY++E
Sbjct: 113 IRSESHQI-DGQDYYILE 129
>gi|434400320|ref|YP_007134324.1| photosystem II oxygen evolving complex protein PsbP [Stanieria
cyanosphaera PCC 7437]
gi|428271417|gb|AFZ37358.1| photosystem II oxygen evolving complex protein PsbP [Stanieria
cyanosphaera PCC 7437]
Length = 182
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR----GAGADIFYRDPYVLDENVSVELSS-PSSSRYK 152
G + Y++ GY F YP WI V G D+ +RD EN+SV +S P+ S
Sbjct: 26 GLQSYVNPSQGYEFLYPNGWIPVDLKKPSPGVDVVFRDLIERGENLSVIVSDVPADS--- 82
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
++E+LG P E G + + M R++ L+ S+ DG+ YYL+E
Sbjct: 83 TLEELGTPSEVGYRFFK------MMNNPEFDRQAEFLTAESK-DRDGKTYYLLE 129
>gi|443325256|ref|ZP_21053960.1| PsbP [Xenococcus sp. PCC 7305]
gi|442795138|gb|ELS04521.1| PsbP [Xenococcus sp. PCC 7305]
Length = 181
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGA----DIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y++ GY F YP WI V +GA + YRD EN+SV +S + ++
Sbjct: 26 GVQSYVNPSAGYEFLYPNGWIPVTVSGASSNVSVVYRDLVERSENLSVIVSDVPAE--ET 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+EDLG P E G + F + RE+ +S SR DD + YY+ E
Sbjct: 84 LEDLGTPTEVGYRF-------FKAVNDDRDRETEFISAESRQRDD-QTYYIFE 128
>gi|302755416|ref|XP_002961132.1| hypothetical protein SELMODRAFT_74043 [Selaginella moellendorffii]
gi|300172071|gb|EFJ38671.1| hypothetical protein SELMODRAFT_74043 [Selaginella moellendorffii]
Length = 159
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 92 LAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRY 151
+A+ GF+ +D DGY F YP W ++ G D+ Y+D E+VSV + +
Sbjct: 2 VAETPAGFKASLDKSDGYVFYYPFGWEEIVVKGQDVVYKDVIEPLESVSVNIVKTEKT-- 59
Query: 152 KSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ D GPP + + ++ ++LT +++ ++ R DG+ YY E
Sbjct: 60 -DIHDFGPPDKLSKTLVEKFLT-------SPSQKTQVIEAKERET-DGKPYYTFE 105
>gi|302766918|ref|XP_002966879.1| hypothetical protein SELMODRAFT_86878 [Selaginella moellendorffii]
gi|300164870|gb|EFJ31478.1| hypothetical protein SELMODRAFT_86878 [Selaginella moellendorffii]
Length = 159
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 92 LAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRY 151
+A+ GF+ +D DGY F YP W ++ G D+ Y+D E+VSV + +
Sbjct: 2 VAETPAGFKASLDKNDGYVFYYPFGWEEIVVKGQDVVYKDVIEPLESVSVNIVKTEKT-- 59
Query: 152 KSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ D GPP + + ++ ++LT +++ ++ R DG+ YY E
Sbjct: 60 -DIHDFGPPDKLSKTLVEKFLT-------SPSQKTQVIEAKERET-DGKPYYTFE 105
>gi|125532244|gb|EAY78809.1| hypothetical protein OsI_33912 [Oryza sativa Indica Group]
Length = 178
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D Y+D E+VSV + P+S +
Sbjct: 21 AEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVIEPLESVSVN-TIPTSKQ-- 77
Query: 153 SVEDLGPPKEAGRKVLRQYLTE-FMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ +LGPP + ++R+ L +L +E+++ DGR YY E +
Sbjct: 78 DIRELGPPDQVAEALIRKVLAAPTQKAKLIEAKENDV---------DGRTYYTFEFTA 126
>gi|398313931|emb|CCI55392.1| PsbP-like protein PPL1 [Marchantia polymorpha]
Length = 239
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 66 AVPRRNAMALILSSYIFSDFGFRNTALAQQS-VGFREYIDTFDGYSFKYPQNWIQVRGAG 124
+V RR A+A + ++ + N+ALA ++ G+ +D DGY+F YP W +V G
Sbjct: 58 SVGRREALAGV-AALVTGVLSSNNSALAAKAPKGYAAILDNADGYAFFYPFGWQEVAVKG 116
Query: 125 ADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRR 184
D+ +D E+VSV + + S+++LG P+E + ++ + L+ +
Sbjct: 117 QDVALKDVIEPLESVSVSIIKTDKT---SLQELGSPEEVAKALVEKVLSSPT-------Q 166
Query: 185 ESNILSTSSRVADDGRLYYLVE 206
+ N++S + +D R YY E
Sbjct: 167 KVNLVSAKEKTEND-RTYYQFE 187
>gi|422303663|ref|ZP_16391014.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9806]
gi|389791336|emb|CCI12845.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9806]
Length = 182
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV---RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
G + Y GY F YP+ W QV + AG D+ + D EN+SV ++ + K++
Sbjct: 26 GLQGYTSGSQGYQFLYPKGWTQVEVKKVAGVDVVFHDLIETSENLSVIINPVPDN--KTL 83
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G ++L+ S + +E ++ + S DG+ YY++E
Sbjct: 84 TDLGTPSEVGYRLLKN-----NSLNPNLDKEVELIRSESHQI-DGQDYYILE 129
>gi|425469643|ref|ZP_18848562.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9701]
gi|389880473|emb|CCI38767.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9701]
Length = 182
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV---RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
G + Y GY F YP+ W QV + AG D+ + D EN+SV ++ + K++
Sbjct: 26 GLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVVFHDLIETSENLSVIINPVPDN--KTL 83
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G ++L+ S + +E ++ + S DG+ YY++E
Sbjct: 84 TDLGTPSEVGYRLLKN-----NSLNPNLDKEVELIRSESHQI-DGQDYYILE 129
>gi|357120910|ref|XP_003562167.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Brachypodium
distachyon]
Length = 288
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 61 AATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQV 120
AA + PRR L+ + + F R A + + ID GYSF YP W +V
Sbjct: 101 AAAVESSPRRQV--LVAGAAAAAAFVSRRPNQAALAAEYLPVIDRKAGYSFVYPFGWQEV 158
Query: 121 RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLT-EFMSTR 179
G D Y+D E+VS+ + + + + DLGPP + ++R+ L T+
Sbjct: 159 AVQGQDKVYKDVIEPLESVSINM---IQTTKEDIRDLGPPDQVAEALIRKVLAPPTQKTK 215
Query: 180 LGVRRESNILSTSSRVADDGRLYYLVEVSC 209
L +E++I DGR YY E +
Sbjct: 216 LIEAKENDI---------DGRAYYTFEFTA 236
>gi|2765081|emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA+M+M+Q Q P FS+LTS+LS FNGA LH QV+ +++ P+ AL+V+AS+EKK +M
Sbjct: 1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana]
gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs
gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934
and gb|T46767 come from this gene [Arabidopsis
thaliana]
gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]
Length = 378
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA+M+M+Q Q P FS+LTS+LS FNGA LH QV+ +++ P+ AL+V+AS+EKK +M
Sbjct: 1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|17064988|gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA+M+M+Q Q P FS+LTS+LS FNGA LH QV+ +++ P+ AL+V+AS+EKK +M
Sbjct: 1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA+M+M+Q Q P FS+LTS+LS FNGA LH QV+ +++ P+ AL+V+AS+EKK +M
Sbjct: 1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|326489825|dbj|BAJ93986.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521280|dbj|BAJ96843.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
F ID GYSF YP W +V G D Y+D E+VS+ + P++ + + DLG
Sbjct: 81 FMPVIDRKAGYSFVYPFGWQEVSVQGQDKVYKDVIEPLESVSINM-IPTTK--EDIRDLG 137
Query: 159 PPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
PP + ++R+ L+ T+L +E++I DGR YY E +
Sbjct: 138 PPDQVAEALVRKVLSPPTQKTKLIEAKETDI---------DGRAYYTFEFTA 180
>gi|428781554|ref|YP_007173340.1| PsbP [Dactylococcopsis salina PCC 8305]
gi|428695833|gb|AFZ51983.1| PsbP [Dactylococcopsis salina PCC 8305]
Length = 182
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVR----GAGADIFYRDPYVLDENVSVELSSPSSSRYKS 153
G + Y + +GY F YP W +V+ AG D+ +RD EN+SV ++ R
Sbjct: 26 GLQAYTNGTEGYKFLYPNGWQEVKVDNNTAGVDVVFRDLVEQTENISVVINQVGEDR--Q 83
Query: 154 VEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ DLG P E G++ L+ + S R G L + + G+ YYL+E
Sbjct: 84 LTDLGTPSEVGQR-LKNTIAPPNSDRQGE------LIRADELEKKGQTYYLLE 129
>gi|425440192|ref|ZP_18820500.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9717]
gi|389719412|emb|CCH96737.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9717]
Length = 182
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV---RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
G + Y GY F YP+ W QV + AG D+ + D EN+SV ++ + K++
Sbjct: 26 GLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVVFHDLIETSENLSVIINPVPDN--KTL 83
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G ++L+ S + +E ++ + S DG+ YY++E
Sbjct: 84 TDLGTPSEVGYRLLKN-----NSLNPNLDKEVELIRSESHQI-DGQDYYILE 129
>gi|166365167|ref|YP_001657440.1| photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa NIES-843]
gi|166087540|dbj|BAG02248.1| photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa NIES-843]
Length = 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV---RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
G + Y GY F YP+ W QV + AG D+ + D EN+SV ++ + K++
Sbjct: 26 GLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVVFHDLIETSENLSVIINPIPDN--KTL 83
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G ++L+ S + +E ++ + S DG+ YY++E
Sbjct: 84 TDLGTPSEVGYRLLKN-----NSLNPNLDKEVELIRSESHQI-DGQDYYILE 129
>gi|425465367|ref|ZP_18844676.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9809]
gi|389832407|emb|CCI24008.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9809]
Length = 182
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV---RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
G + Y GY F YP+ W QV + AG D+ + D EN+SV ++ + K++
Sbjct: 26 GLQGYTSGSQGYQFLYPKGWTQVEVKKVAGVDVVFHDLIETSENLSVIINPIPDN--KTL 83
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G ++L+ S + +E ++ + S DG+ YY++E
Sbjct: 84 TDLGTPSEVGYRLLKN-----NSLNPNLDKEVELIRSESHQI-DGQDYYILE 129
>gi|425460168|ref|ZP_18839650.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9808]
gi|389827163|emb|CCI21744.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9808]
Length = 182
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQV---RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
G + Y GY F YP+ W QV + AG D+ + D EN+SV ++ + K++
Sbjct: 26 GLQGYTSGSQGYQFLYPKGWTQVDVKKVAGVDVVFHDLIETSENLSVIINPVPDN--KTL 83
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G ++L+ S + +E ++ + S DG+ YY++E
Sbjct: 84 TDLGTPSEVGYRLLKN-----NSLNPNLDKEVELIRSESHQI-DGQDYYILE 129
>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MA+++M+Q Q+ P FS+LTS+LS FNGA LH QV+ +++ P+ AL+V+AS+EKK +M
Sbjct: 1 MAKIMMLQ-QSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|326492770|dbj|BAJ90241.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 201
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
F ID GYSF YP W +V G D Y+D E+VS+ + P++ + + DLG
Sbjct: 50 FMPVIDRKAGYSFVYPFGWQEVSVQGQDKVYKDVIEPLESVSINM-IPTTK--EDIRDLG 106
Query: 159 PPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
PP + ++R+ L+ T+L +E++I DGR YY E +
Sbjct: 107 PPDQVAEALVRKVLSPPTQKTKLIEAKETDI---------DGRAYYTFEFTA 149
>gi|449464194|ref|XP_004149814.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Cucumis
sativus]
gi|449519084|ref|XP_004166565.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 236
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D ++D ENVSV L P+S +
Sbjct: 80 AETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLENVSVNL-IPTSK--E 136
Query: 153 SVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ D GPP++ ++++ L T+L E ++ +G+ YY E
Sbjct: 137 DIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDV---------NGKAYYTFE 182
>gi|145348519|ref|XP_001418695.1| lumenal PsbP-like protein [Ostreococcus lucimarinus CCE9901]
gi|144578925|gb|ABO96988.1| lumenal PsbP-like protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
G DT +GY F YP W +++ G Y+D +++ SV L+ + R +SV+D+
Sbjct: 76 GMNAVKDTREGYEFLYPVGWQEIQVDGQAAVYKD--IIEPLESVALNVYPTQR-ESVKDI 132
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G E + ++ + LT + ++ +L+TS R DG LYY E
Sbjct: 133 GTADEVAKTLVGKALTAPGA-------QAKVLATSERTDKDGHLYYQFE 174
>gi|428768446|ref|YP_007160236.1| photosystem II oxygen evolving complex protein PsbP [Cyanobacterium
aponinum PCC 10605]
gi|428682725|gb|AFZ52192.1| photosystem II oxygen evolving complex protein PsbP [Cyanobacterium
aponinum PCC 10605]
Length = 183
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 90 TALAQQSVGFREYIDTFDGYSFKYPQNWIQVR----GAGADIFYRDPYVLDENVSVELSS 145
+A + G Y+D DGY F YP W+ V G D+ +RD EN+SV +S
Sbjct: 18 SACVSPTGGLNPYVDGADGYKFLYPNGWMAVDVKEASEGVDVVFRDFIERSENLSVIISD 77
Query: 146 PSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLV 205
+ + + DLG P + G + + + ++ +RE+ ++S R + YYL+
Sbjct: 78 VNKNM--DLSDLGSPTDVGYRFM-----QIVNQDTNNQREAELISAEKR-EQNLEDYYLL 129
Query: 206 E 206
E
Sbjct: 130 E 130
>gi|255582368|ref|XP_002531973.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223528370|gb|EEF30409.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 242
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D ++D ENVSV + P+S +
Sbjct: 86 AETKKGFLLVTDKKDGYSFLYPFGWQEVFIEGQDKVFKDIIEPLENVSV-TTVPTSKQ-- 142
Query: 153 SVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ D GPP++ ++++ L T+L E ++ DG+ YY E +
Sbjct: 143 DIRDFGPPQQVAEVLIKKVLAPPSQKTKLIEASEHDV---------DGKTYYTFEFTA 191
>gi|297820294|ref|XP_002878030.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297323868|gb|EFH54289.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 229
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D D YSF YP W +V G D Y+D E+VSV L P+S +
Sbjct: 74 AESKKGFLAVSDNKDAYSFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNL-IPTSKQ-- 130
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
++++ GPPK+ ++++ L + L +S DG+ YY E +
Sbjct: 131 TIKEFGPPKQIAETLIKKVLAP--------PNQKTTLIDASEHDVDGKTYYQFEFTV 179
>gi|218438119|ref|YP_002376448.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 7424]
gi|218170847|gb|ACK69580.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 7424]
Length = 183
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 72 AMALILS---SYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWI--QVRGA--G 124
A+ LI+S S SD G G + Y++ GY F YP WI V+ A G
Sbjct: 8 ALVLIISLTLSSCASDLG-----------GLQSYVNPTSGYEFLYPNGWIPVDVKNASDG 56
Query: 125 ADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRR 184
D+ YRD EN+SV +S K + D+G P + G + + ++ + R
Sbjct: 57 VDLVYRDLIERSENLSVIISDVPEG--KDLSDIGTPSDVGYRFFKA-----VNNDSNLNR 109
Query: 185 ESNILSTSSRVADDGRLYYLVE 206
+ ++ S ++G+ YY++E
Sbjct: 110 NAELIRADSH-EENGKTYYILE 130
>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]
Length = 378
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q Q F L S+LS FNGA L + ++ +++T P+ +L V+AS+ KK +M
Sbjct: 1 MARLVALQ-QNQLSFPPLASSLSDFNGARLQTHIQLKRKTWQPKGSLIVSASSTKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|388495618|gb|AFK35875.1| unknown [Medicago truncatula]
Length = 237
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 69 RRNAMALILSSYIFSDFGFRNTAL---AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGA 125
RR A+A+ ++ + F F +++ A GF+ +D DGY F YP W +V G
Sbjct: 56 RRQAIAIAATAPLV--FLFNQSSISFAADNKSGFQPVVDRKDGYQFVYPFGWQEVVIEGQ 113
Query: 126 DIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRE 185
D ++D ENVSV + P+S + +++ G P++ ++++ L ++
Sbjct: 114 DKVFKDVIEPLENVSVTM-IPTSK--QDIKEFGSPEQVAATLIKKVLAP-------PNQK 163
Query: 186 SNILSTSSRVADDGRLYYLVE 206
+ I+ + R DG+ YY E
Sbjct: 164 TKIIQATEREI-DGKAYYQFE 183
>gi|15233245|ref|NP_191093.1| PsbP-like protein 1 [Arabidopsis thaliana]
gi|9297075|sp|P82538.1|PPL1_ARATH RecName: Full=PsbP-like protein 1, chloroplastic; AltName:
Full=OEC23-like protein 4; AltName: Full=PsbP-related
thylakoid lumenal protein 2; Flags: Precursor
gi|16930399|gb|AAL31885.1|AF419553_1 AT3g55330/T26I12_210 [Arabidopsis thaliana]
gi|7019666|emb|CAB75767.1| putative protein [Arabidopsis thaliana]
gi|20453231|gb|AAM19854.1| AT3g55330/T26I12_210 [Arabidopsis thaliana]
gi|21593252|gb|AAM65201.1| unknown [Arabidopsis thaliana]
gi|332645848|gb|AEE79369.1| PsbP-like protein 1 [Arabidopsis thaliana]
Length = 230
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D D Y+F YP W +V G D Y+D E+VSV L P+S +
Sbjct: 75 AESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNL-VPTSKQ-- 131
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
++++ GPPK+ ++++ L + L +S DG+ YY E +
Sbjct: 132 TIKEFGPPKQIAETLIKKVLAP--------PNQKTTLIDASEHDVDGKTYYQFEFTV 180
>gi|307153689|ref|YP_003889073.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 7822]
gi|306983917|gb|ADN15798.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 7822]
Length = 183
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 99 FREYIDTFDGYSFKYPQNWI--QVRGA--GADIFYRDPYVLDENVSVELSSPSSSRYKSV 154
+ Y+ GY F YP WI V+ A G D+ YRD EN+SV +S K++
Sbjct: 27 LQSYVSPGAGYQFLYPNGWIPVDVKNATQGVDLVYRDLIERSENLSVIISDVPDG--KTL 84
Query: 155 EDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
D+G P + G + + ++ V R + ++ SR ++G+ YY++E
Sbjct: 85 SDIGTPSDVGYRFFQT-----VNNDPNVNRTAELIRADSR-EENGKTYYILE 130
>gi|308806035|ref|XP_003080329.1| putative protein (ISS) [Ostreococcus tauri]
gi|116058789|emb|CAL54496.1| putative protein (ISS) [Ostreococcus tauri]
Length = 188
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
G DT +GY F YP W +++ G Y+D +++ SV L+ + R KSV ++
Sbjct: 37 GMNAVKDTREGYEFLYPVGWQEIQVDGQQAVYKD--IIEPLESVALNVYPTQR-KSVAEI 93
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G +E + ++ + LT + +L+TS R DG LYY E
Sbjct: 94 GTAEEVAKTLVGKALTAPGAA-------GKVLATSERTDKDGHLYYQFE 135
>gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 374
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 4 MVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVMAAT 63
M++ QHQ P FS+LTS+LS FNGA LH QV+ +++ P+ AL+V+AS+EKK +M T
Sbjct: 1 MMLQQHQ--PSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGT 58
Query: 64 QF 65
+F
Sbjct: 59 RF 60
>gi|388493196|gb|AFK34664.1| unknown [Lotus japonicus]
Length = 240
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGY+F YP W +V G D ++D E+VSV + P+ +
Sbjct: 84 AENKKGFLPVTDQKDGYTFIYPFGWQEVSIEGQDKVFKDVIEPLESVSVNI-IPTGK--Q 140
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
++++ GPP++ G ++++ L +++ I+ + + DG+ YY E
Sbjct: 141 NIKEFGPPQQVGETLIKRVLAP-------PNQKTKIIEATEQDV-DGKTYYRFE 186
>gi|384248434|gb|EIE21918.1| Mog1p/PsbP-like protein [Coccomyxa subellipsoidea C-169]
Length = 237
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 59 VMAATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWI 118
+ A T+ VP R AL + S + ++ F+ Y GY F+ P +W
Sbjct: 35 IRAKTESPVPIRRRQALSILFMTASTLQTAASDAETETSQFQTYSSPKQGYKFQIPSDWQ 94
Query: 119 QVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVL----RQYLTE 174
+ +GAD+ + +P ++ V + S R KS+E G G ++L + TE
Sbjct: 95 KTEKSGADVLFVEPASKAGDIGVTV---SPVRIKSLEQFGDLTAVGDRLLAAERSKESTE 151
Query: 175 FMSTRLGVRRESNILSTSSRVADDGRLYY 203
++ N+LS++SR ++G L Y
Sbjct: 152 YV----------NLLSSASRRGENGTLIY 170
>gi|33240547|ref|NP_875489.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33238075|gb|AAQ00142.1| Photosystem II protein P PsbP [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 185
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 107 DG-YSFKYPQNW--IQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEA 163
DG Y F YP W I ++G G ++ + D DE +S+ +S S+ +E++G P E
Sbjct: 39 DGRYGFFYPTGWTRITLKG-GPEVVFHDLINSDETLSLVISDISAD--VELENMGSPSEV 95
Query: 164 GRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLY---YLVEV 207
G K++ L G RE+ +L SRVAD+ Y YL+ +
Sbjct: 96 GEKLMNNLLAPN-----GGEREAELLDAKSRVADNHTFYDIEYLIHL 137
>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]
Length = 378
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q Q F L S+LS FNG L + ++ +++T P+ +L V+AS+ KK +M
Sbjct: 1 MARLVALQ-QNQLSFPPLASSLSDFNGTRLQTHIQLKRKTWQPKGSLIVSASSTKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|255072847|ref|XP_002500098.1| thylakoid lumenal 25.6kDa protein like, chloroplast precursor
[Micromonas sp. RCC299]
gi|226515360|gb|ACO61356.1| thylakoid lumenal 25.6kDa protein like, chloroplast precursor
[Micromonas sp. RCC299]
Length = 222
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
GF DT GY F YP W ++ G D Y+D +++ SV L+ +SR +S+ ++
Sbjct: 71 GFNVVKDTRKGYQFYYPVGWQEITVDGQDAVYKD--IIEPLESVALNIYPTSR-ESLTEI 127
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G P E + ++ + L + ++ +L T+ R +G LYY E
Sbjct: 128 GNPDEVAKTLVAKALAVPGA-------QAKVLKTAQRKDKEGHLYYAFE 169
>gi|427722721|ref|YP_007069998.1| photosystem II oxygen evolving complex protein PsbP [Leptolyngbya
sp. PCC 7376]
gi|427354441|gb|AFY37164.1| photosystem II oxygen evolving complex protein PsbP [Leptolyngbya
sp. PCC 7376]
Length = 190
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 108 GYSFKYPQNWIQVR----GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEA 163
GY F YP WI V G D+ +RD EN+SV +S K++ DLG P +
Sbjct: 45 GYEFLYPNGWIPVNVENAKTGVDVVFRDLIEYSENLSVIISDVPVE--KNLTDLGSPTDV 102
Query: 164 GRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G + +++ R+ ++ R D G+ YY++E
Sbjct: 103 GYRFMQE-------ASQNSDRQPELIRAEERSDDAGQTYYILE 138
>gi|224109588|ref|XP_002315246.1| predicted protein [Populus trichocarpa]
gi|222864286|gb|EEF01417.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D DGYSF YP W +V G D ++D E++SV + + +
Sbjct: 87 AESKKGFLLVTDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLESISVNV---IPTVKQ 143
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ D GPP++ ++++ L + L + DG++YY E
Sbjct: 144 DIRDFGPPQQVAETLIKKVLAP--------PSQKTKLIEAKEHGADGKIYYTFE 189
>gi|225449629|ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
gi|296086288|emb|CBI31729.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
++ ++D DGYS+ YP +W + G D ++D Y+ +NV V P+ R + DL
Sbjct: 84 NYKAFVDLSDGYSYYYPLDWREFEFRGHDSAFKDRYLQLQNVRVSF-IPTDKR--DIHDL 140
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
GP +E +++ + + IL +V DG+ YY VE
Sbjct: 141 GPMEEVVPNLVKNVYA-------APNQIATILDMQEKVV-DGKNYYTVE 181
>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max]
gi|255647108|gb|ACU24022.1| unknown [Glycine max]
Length = 378
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q Q FS L S+LS F+G L +Q++ +++ P+ + +V+AS+ KK +M
Sbjct: 1 MARVVALQ-QNQLSFSTLASSLSDFSGTRLQTQLQFKRKQCHPKGSFYVSASSTKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|225449633|ref|XP_002284256.1| PREDICTED: putative oxygen evolving enhancer protein [Vitis
vinifera]
gi|296086290|emb|CBI31731.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF +D DGYSF YP W +V G D ++D E+VSV + P+ +
Sbjct: 82 AETKKGFLAVMDKKDGYSFLYPFGWQEVVIDGQDKVFKDVIEPLESVSVNM-IPTVK--Q 138
Query: 153 SVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVW 211
+ +LG P+E ++++ L T+L E ++ DG+ YY E + V
Sbjct: 139 DIRELGSPQEVAEALIKKVLAPPSQKTKLVEAVEHDV---------DGKAYYTFEFT-VQ 188
Query: 212 CWNITQLLVTRIFI 225
N T+ ++ I I
Sbjct: 189 AANFTRHALSAITI 202
>gi|356568959|ref|XP_003552675.1| PREDICTED: uncharacterized protein LOC100305918 [Glycine max]
Length = 236
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 89 NTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSS 148
N+ A+ GF +D DGYSF YP W +V G D ++D ENVSV + P+
Sbjct: 76 NSFAAENKKGFLPVLDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLENVSVNV-IPTG 134
Query: 149 SRYKSVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ + + G P+E ++++ L T++ +E ++ +G+ YY E
Sbjct: 135 KQ--DITEFGSPQEVAETLIKKVLAPPNQKTKIVEAKEQDV---------EGKKYYQFE 182
>gi|255626971|gb|ACU13830.1| unknown [Glycine max]
Length = 216
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 89 NTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSS 148
N+ A+ GF +D DGYSF YP W +V G D ++D ENVSV + P+
Sbjct: 76 NSFAAENKKGFLPVLDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLENVSVNV-IPTG 134
Query: 149 SRYKSVEDLGPPKEAGRKVLRQYLT-EFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ + + G P+E ++++ L T++ +E ++ +G+ YY E
Sbjct: 135 KQ--DITEFGSPQEVAETLIKKVLAPPNQKTKIVEAKEQDV---------EGKKYYQFE 182
>gi|170077918|ref|YP_001734556.1| PsbP [Synechococcus sp. PCC 7002]
gi|169885587|gb|ACA99300.1| PsbP [Synechococcus sp. PCC 7002]
Length = 183
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 108 GYSFKYPQNWIQV----RGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEA 163
GY F YP WI V G D+ +RD EN+SV +S + K++ DLG P +
Sbjct: 39 GYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISDVPAD--KALNDLGTPTDV 96
Query: 164 GRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G + +++ R+ ++ SR D G+ YY +E
Sbjct: 97 GYRFMKE-------ASQNSDRQPELIRAESR-TDKGQTYYTLE 131
>gi|388494952|gb|AFK35542.1| unknown [Medicago truncatula]
Length = 234
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 89 NTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPS 147
N+ LA++ +R ++D DGYS+ YP +W + D ++D Y+ +NV V P+
Sbjct: 73 NSLLAEEIPDRYRSFVDYEDGYSYIYPSDWKEFDFRAHDSAFKDRYLQLQNVRVRF-IPT 131
Query: 148 SSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K + DLGP +E +++ T R I R DG+ YY +E
Sbjct: 132 EK--KDIRDLGPMEEVITDLVKHRYT-------APNRRPTIYDMQERTI-DGKHYYTME 180
>gi|356499671|ref|XP_003518660.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Glycine max]
Length = 232
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 89 NTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSS 148
N+ A+ GF +D DGYSF YP W +V G D ++D ENVSV + P+
Sbjct: 72 NSFAAENKKGFLPVLDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLENVSVNV-IPTG 130
Query: 149 SRYKSVEDLGPPKEAGRKVLRQYL 172
+ + + G P+E ++++ L
Sbjct: 131 KQ--DITEFGSPQEVAETLIKKVL 152
>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
Length = 380
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q QT P FS+L S+LS FNG LHSQVR +++ + AL V+AS+ K +M
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVRCKRRVWQTKGALQVSASSSKNILIM 60
Query: 61 AATQF 65
T+F
Sbjct: 61 GGTRF 65
>gi|357464759|ref|XP_003602661.1| PsbP domain-containing protein [Medicago truncatula]
gi|358348394|ref|XP_003638232.1| PsbP domain-containing protein [Medicago truncatula]
gi|355491709|gb|AES72912.1| PsbP domain-containing protein [Medicago truncatula]
gi|355504167|gb|AES85370.1| PsbP domain-containing protein [Medicago truncatula]
Length = 237
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 69 RRNAMALILSSYIFSDFGFRNTALAQQSV--GFREYIDTFDGYSFKYPQNWIQVRGAGAD 126
R+ + L+L+ +++S F N L+ Q + + Y D+ +G++ + P +W +V AGA
Sbjct: 51 RKLNLTLLLTPFLWS--VFPNVLLSAQELITELQRYTDSNEGFTLQIPSSWTKVDKAGAT 108
Query: 127 IFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRES 186
++DP N+ V + + R ++ D G P+ K+L+ R +E+
Sbjct: 109 ALFQDPNKGSNNIGVVV---NPVRLTALGDFGTPQFVVDKLLQ------AERRKESTKEA 159
Query: 187 NILSTSSRVADDGRLYYLVE 206
+++ + R G Y E
Sbjct: 160 EVVTVAERSGKGGLQVYEFE 179
>gi|217072084|gb|ACJ84402.1| unknown [Medicago truncatula]
Length = 234
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 89 NTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPS 147
N+ LA++ +R ++D DGYS+ YP +W + D ++D Y+ +NV V P+
Sbjct: 73 NSLLAEEIPDRYRSFVDYEDGYSYIYPSDWKEFDFRAHDSAFKDRYLQLQNVRVRF-IPT 131
Query: 148 SSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K V DLGP +E +T+ + R + + DG+ YY +E
Sbjct: 132 EK--KDVRDLGPMEEV--------ITDLVKHRYTAPNQRPTIYDMQERTIDGKHYYTME 180
>gi|388504902|gb|AFK40517.1| unknown [Lotus japonicus]
Length = 234
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
+R ++D DGYS+ YP +W + D ++D Y+ +NV V + K + D+G
Sbjct: 84 YRAFVDYSDGYSYVYPSDWKEFDFRAHDSAFKDRYLQLQNVRVRF---LPTEKKDIRDMG 140
Query: 159 PPKEAGRKVLR-QYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
P +E +++ +Y T + + +E NI DG+ YY E
Sbjct: 141 PIEEVVPNLVKHKYSTPTQISTIYDMQEKNI---------DGKHYYTFE 180
>gi|225450527|ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic
[Vitis vinifera]
gi|147773479|emb|CAN73432.1| hypothetical protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product [Vitis vinifera]
Length = 378
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V+ QHQ P FS+L S+LS FNG L + ++ +++ P+ ALHVTAS EKK +M
Sbjct: 1 MARLVV-QHQNQPSFSLLPSSLSDFNGIRLTNHIQCRRKVCQPKGALHVTASGEKKILMM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|294462069|gb|ADE76588.1| unknown [Picea sitchensis]
Length = 295
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
+ID +G++ P +W +V AGA + + DP V N+ V + + R S++D G
Sbjct: 140 LERFIDEKEGFTLLKPSDWNKVDKAGATVLFEDPDVRTNNIGVVV---NPVRISSLKDFG 196
Query: 159 PPKEAGRKVLR 169
P++ K+L+
Sbjct: 197 TPQDVADKLLK 207
>gi|254421321|ref|ZP_05035039.1| PsbP [Synechococcus sp. PCC 7335]
gi|196188810|gb|EDX83774.1| PsbP [Synechococcus sp. PCC 7335]
Length = 185
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 15/122 (12%)
Query: 91 ALAQQS----VGFREYIDTFDGYSFKYPQNWI--QVRGAGADIFYRDPYVLDENVSVELS 144
AL QS V + Y D+++GY FKYP W+ QV G D + D ENVSV +S
Sbjct: 21 ALGLQSCSPGVSLQSYNDSYEGYEFKYPTGWVPAQVEN-GPDTVFHDIIRASENVSVVVS 79
Query: 145 SPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYL 204
S K++ DLG P E G L++ +++ R +++ S A D +LYY+
Sbjct: 80 PVSGG--KTLPDLGTPSEVGYT-----LSKSITSLAPDDRNVELVNAQSFEAGD-KLYYI 131
Query: 205 VE 206
+E
Sbjct: 132 LE 133
>gi|412986723|emb|CCO15149.1| predicted protein [Bathycoccus prasinos]
Length = 218
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
GF +T DGY F YP W ++ G ++D +++ S+ L+ + R +S++D+
Sbjct: 67 GFNVVKETRDGYQFIYPVGWQEISVDGQAKVFKD--IIEPLESISLNIYPTER-ESLKDI 123
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G +E +++Q L+ LG +LS R DG LYY E
Sbjct: 124 GTAQEVAETLVKQALS--APGALG-----KLLSAKERTDKDGHLYYSFE 165
>gi|388499356|gb|AFK37744.1| unknown [Lotus japonicus]
Length = 377
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V+ Q Q FS L S+LS F+G L +Q++ +++ P+ HV+AS+ KK +M
Sbjct: 1 MARLVVPQ-QNQLSFSPLASSLSDFSGTRLQTQIQFRRKAWQPK-GFHVSASSTKKILIM 58
Query: 61 AATQF 65
T+F
Sbjct: 59 GGTRF 63
>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q QT P FS+L S+LS FNG LHSQV+ +++ + AL V+AS+ K +M
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIM 60
Query: 61 AATQF 65
T+F
Sbjct: 61 GGTRF 65
>gi|388520007|gb|AFK48065.1| unknown [Lotus japonicus]
Length = 377
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V+ Q Q FS L S+LS F+G L +Q++ +++ P+ HV+AS+ KK +M
Sbjct: 1 MARLVVPQ-QNQLSFSPLASSLSDFSGTRLQTQIQFRRKAWQPK-GFHVSASSTKKILIM 58
Query: 61 AATQF 65
T+F
Sbjct: 59 GGTRF 63
>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa]
gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q QT P FS+L S+LS FNG LHSQV+ +++ + AL V+AS+ K +M
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIM 60
Query: 61 AATQF 65
T+F
Sbjct: 61 GGTRF 65
>gi|412988572|emb|CCO17908.1| predicted protein [Bathycoccus prasinos]
Length = 279
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 59 VMAATQFAVPRRNAMALILSSYIFSDFGF----RNTALAQQSVGFREYIDTFDGYSFKYP 114
M+A++ RR L+LS ++F FG R A + EY+D + + YP
Sbjct: 78 AMSASKTTTSRREH--LLLSEFLF--FGMIWNGRRIAAFADEMTLTEYVDETNNFHLSYP 133
Query: 115 QNWIQVRGAGADIFYRDPYVLDENVSVELSS---PSSSRYKSVEDLGPP 160
W+ + AGA +++P V ++ V ++ S + S+ED+G
Sbjct: 134 TEWVLEKKAGATALFKNPSVKYASIGVTVTPVRIDSLKEFGSLEDIGAK 182
>gi|358248758|ref|NP_001239935.1| uncharacterized protein LOC100813624 [Glycine max]
gi|255647240|gb|ACU24088.1| unknown [Glycine max]
Length = 234
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 89 NTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPS 147
N AQ+ +R ++D DGYS+ YP +W + D ++D Y+ +NV V
Sbjct: 73 NLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQLQNVRVRF---I 129
Query: 148 SSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ K + DLGP +E + + + R + ++ DG+ YY E
Sbjct: 130 PTEKKDIRDLGPMEEV--------IYDLVKHRYAAPNQRPTINDMQEKTIDGKHYYTFE 180
>gi|384253416|gb|EIE26891.1| Mog1p/PsbP-like protein [Coccomyxa subellipsoidea C-169]
Length = 162
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 104 DTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEA 163
D+ DGYSF YP W +V G D+ Y+D E+VSV ++ + +V + G P EA
Sbjct: 15 DSQDGYSFVYPFGWQEVAVKGQDVVYKDVIEPLESVSVSITQTDKA---NVSEFGSPAEA 71
Query: 164 GRKV---LRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ L + + V++E DGR+YY E
Sbjct: 72 CPYIDASLFLFAVQDAVCYCCVQKEK-----------DGRMYYTFE 106
>gi|255582372|ref|XP_002531975.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223528372|gb|EEF30411.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 180
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
+R ++D DGYS+ YP +WI D ++D Y +NV V P+ + + DL
Sbjct: 29 NYRAFVDLKDGYSYYYPSDWIDFDFRAHDSAFKDRYKQLQNVRVRF-IPTDK--QDIHDL 85
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
GP ++ +++ + I+ R A DG+ YY VE
Sbjct: 86 GPMEQVVSDLVKHVYA-------APNQRPTIIDIQERSA-DGKNYYTVE 126
>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Glycine max]
Length = 378
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLSGFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPVM 60
MAR+V +Q Q FS L S+L F+G L +Q++ +++ P+ + +V+AS+ KK +M
Sbjct: 1 MARVVALQ-QNQLSFSPLASSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSASSTKKILIM 59
Query: 61 AATQF 65
T+F
Sbjct: 60 GGTRF 64
>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 381
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MARMVMMQHQTHPCFSILTSTLS-GFNGASLHSQVRQQQQTPLPREALHVTASNEKKNPV 59
MAR++ +Q QT P FS+LTS+LS FNG LH+Q++ +++ + AL VTAS+ K +
Sbjct: 1 MARLITIQQQTQPSFSLLTSSLSSDFNGTRLHTQIQCKRRVWQAKGALQVTASSSKNILI 60
Query: 60 MAATQF 65
M T+F
Sbjct: 61 MGGTRF 66
>gi|159903629|ref|YP_001550973.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9211]
gi|159888805|gb|ABX09019.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9211]
Length = 186
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 90 TALAQQSVGFREYIDTFDG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPS 147
TA S E + DG Y F YP W +V G ++ + D DE +S+ +S
Sbjct: 22 TACNTSSTAGLEAFQSNDGRYGFFYPTGWTRVTVSGGPEVVFHDVINSDETLSLVVSDLD 81
Query: 148 SSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEV 207
+E+LG PK G++++ Q + G R++ +L R DG +Y +E
Sbjct: 82 ED--VDLEELGGPKTVGQRLIEQVFSA-----DGAGRQAELLDAQKREF-DGHTFYDIEY 133
Query: 208 S 208
S
Sbjct: 134 S 134
>gi|302771736|ref|XP_002969286.1| hypothetical protein SELMODRAFT_91861 [Selaginella moellendorffii]
gi|300162762|gb|EFJ29374.1| hypothetical protein SELMODRAFT_91861 [Selaginella moellendorffii]
Length = 182
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 102 YIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPK 161
Y D +G++F P+ W +V GA + + DP +V V + S R S+E+ G P+
Sbjct: 27 YEDERNGFAFSRPEEWTKVDKYGATVLFEDPTKKSNSVGVVV---SPVRISSLEEFGSPQ 83
Query: 162 EAGRKVL 168
E K++
Sbjct: 84 EVAIKLM 90
>gi|74272685|gb|ABA01138.1| chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa
protein [Chlamydomonas incerta]
Length = 204
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 11/117 (9%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D D Y F YP W +V GAD+ ++D E+VSV L +++ K
Sbjct: 49 AKAPKGFNPVEDAQDNYRFVYPFGWQEVAVKGADVVFKDVVEPLESVSVTL---TATDKK 105
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ + G + + + LT + E I++T R A G YY +E +
Sbjct: 106 DITEFGDLQTVAETLAKDVLTAPGT-------EVKIIATEQREA-KGHNYYQIEFTA 154
>gi|307108176|gb|EFN56417.1| hypothetical protein CHLNCDRAFT_13502, partial [Chlorella
variabilis]
Length = 153
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 104 DTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEA 163
DT DGYSF YP W +V+ G D+ Y+D E+VSV L + V + G KE
Sbjct: 8 DTQDGYSFLYPFGWQEVQVEGQDVVYKDVIEPLESVSVSLVPTEKA---EVGEFGDAKEV 64
Query: 164 GRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
+ + LT +E +++ R +GR YY E +
Sbjct: 65 AFTLADKVLT-------APNQEIALINVGERTT-NGRKYYDFEFTA 102
>gi|224081048|ref|XP_002306276.1| predicted protein [Populus trichocarpa]
gi|222855725|gb|EEE93272.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 89 NTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSS 148
N LAQ+ + Y D+ +G++ + P +++QV AGA + + + N+ V + +P S
Sbjct: 87 NITLAQE-LELERYTDSKEGFTLRRPSSYVQVDKAGATVLFEEANKGSNNIGV-VVTPES 144
Query: 149 SRYKSVEDLGPPKEAGRKVLRQYLTEFM--STRLGVRR 184
+ K E + + +G L+ Y E+ STR G++R
Sbjct: 145 T--KDAEVISVAERSGHGGLQVYEFEYKVDSTRGGMKR 180
>gi|255637163|gb|ACU18912.1| unknown [Glycine max]
Length = 205
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 89 NTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPS 147
N AQ+ +R ++D DGYS+ YP +W + D ++D Y+ +NV V
Sbjct: 73 NLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQLQNVRVRF---I 129
Query: 148 SSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ K + +LGP + + + + + R + ++ DG+ YY E
Sbjct: 130 PTEKKDIRELGP--------MEEVVYDLVKHRYAAPNQRPTINDMQEKTIDGKHYYTFE 180
>gi|86606589|ref|YP_475352.1| photosystem II oxygen evolving complex protein PsbP [Synechococcus
sp. JA-3-3Ab]
gi|86555131|gb|ABD00089.1| photosystem II oxygen evolving complex protein PsbP [Synechococcus
sp. JA-3-3Ab]
Length = 176
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVR---GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVE 155
R Y D ++F YP + V G G + RD ENVS+ ++ + +++
Sbjct: 22 LRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAP--FDKGETIA 79
Query: 156 DLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
DLG P E G+ V + + S R S L + GR YYL E
Sbjct: 80 DLGGPDEVGQLVAEKIIAPEGSGR------STKLLAAEAFERQGRPYYLFE 124
>gi|356536494|ref|XP_003536772.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Glycine max]
Length = 234
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 89 NTALAQQSVG-FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPS 147
N AQ+ +R ++D DGYS+ YP +W + D ++D Y+ +NV V
Sbjct: 73 NLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQLQNVRVRF---I 129
Query: 148 SSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ K + +LGP +E + + + R + ++ DG+ YY E
Sbjct: 130 PTEKKDIRELGPMEEV--------VYDLVKHRYAAPNQRPTINDMQEKTIDGKHYYTFE 180
>gi|56750518|ref|YP_171219.1| hypothetical protein syc0509_c [Synechococcus elongatus PCC 6301]
gi|81299847|ref|YP_400055.1| photosystem II oxygen-evolving complex 23K protein [Synechococcus
elongatus PCC 7942]
gi|56685477|dbj|BAD78699.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168728|gb|ABB57068.1| photosystem II oxygen-evolving complex 23K protein [Synechococcus
elongatus PCC 7942]
Length = 195
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 109 YSFKYPQNWIQVRGAG-ADIFYRDPYVLDENVSVELSS-PSSSRYKSVEDLGPPKEAGRK 166
+ F YP WI V G A I +RDP D N+S+ +S P +S+ + DLG P G +
Sbjct: 43 WQFSYPPAWIAVENPGLATIAFRDPLSPDRNLSLLISPVPDTSQ---LSDLGDPTTVGYE 99
Query: 167 VLRQYL 172
+ Q+L
Sbjct: 100 LQTQWL 105
>gi|449524958|ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplastic-like, partial
[Cucumis sativus]
Length = 202
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
+R ++D+ DGYS+ YP +W + D ++D Y+ +NV V+ + K + +
Sbjct: 85 NYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKF---IPTEKKDIHEE 141
Query: 158 GPPKEAGRKVLR-QYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
GP E +++ +Y T + +E I DG++YY E
Sbjct: 142 GPLDEVVNFLVKHRYAAPNQKTTIYDMKERTI---------DGKIYYTFE 182
>gi|356516389|ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
[Glycine max]
Length = 251
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 102 YIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPK 161
Y D+ +G++ P +W +V AGA + +++ + N+ V + + R K++E+ G P+
Sbjct: 98 YTDSEEGFTLLTPSSWTKVDKAGATVLFQEADMGSNNIGVVV---NPVRLKTLEEFGTPQ 154
Query: 162 EAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K+L+ R +E+ +++ + R + G Y E
Sbjct: 155 FVADKLLQA------ERRKESTKEAELITVAERSGEGGLQIYEFE 193
>gi|318040216|ref|ZP_07972172.1| PsbP [Synechococcus sp. CB0101]
Length = 190
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 90 TALAQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSS 148
+A + + G Y Y+F YP W +V+ G + + D DE +S+ +S +S
Sbjct: 28 SACSAAAAGLNSYQSPDGRYAFLYPTGWTRVQVTDGPQVVFHDLINADETLSLVVSDVNS 87
Query: 149 SRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+ S+E+LG G K+ R + G RE+ ++ S R D GR +Y +E
Sbjct: 88 T--NSLENLGSAVAVGEKLRRVVIAP-----EGSGREAELVEASER-EDGGRTFYDLE 137
>gi|356576841|ref|XP_003556538.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Glycine max]
Length = 231
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 89 NTALAQQ-SVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPS 147
N AQ+ S R ++D DGYS+ YP +W + D ++D Y+ +NV V+ S P+
Sbjct: 70 NLVFAQEKSDRCRVFLDYEDGYSYIYPIDWKEFDFRALDSAFKDRYLQLQNVRVK-SIPT 128
Query: 148 SSRYKSVEDLGPPKE 162
K + DLGP +E
Sbjct: 129 EK--KDIRDLGPMEE 141
>gi|159465647|ref|XP_001691034.1| OEE2-like protein of thylakoid lumen [Chlamydomonas reinhardtii]
gi|158279720|gb|EDP05480.1| OEE2-like protein of thylakoid lumen [Chlamydomonas reinhardtii]
Length = 218
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYK 152
A+ GF D D Y F YP W +V GAD+ ++D E+VSV L++
Sbjct: 63 AKGPKGFNPVEDAQDNYRFVYPFGWQEVAVKGADVVFKDVVEPLESVSVTLTATDKKDIT 122
Query: 153 SVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSC 209
DL + + L + + T G E I++T R A G YY +E +
Sbjct: 123 EFGDLA--------TVAETLAKDVLTAPGT--EVKIIATEQREA-KGHNYYQIEFTA 168
>gi|449464218|ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Cucumis
sativus]
Length = 236
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
+R ++D+ DGYS+ YP +W + D ++D Y+ +NV V+ P+ K + +
Sbjct: 85 NYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKF-IPTEK--KDIHEE 141
Query: 158 GPPKEAGRKVLR-QYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
GP E +++ +Y T + +E I DG++YY E
Sbjct: 142 GPLDEVVNFLVKHRYAAPNQKTTIYDMKERTI---------DGKIYYTFE 182
>gi|168010384|ref|XP_001757884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690761|gb|EDQ77126.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
G+ +D DGY F YP W +V G D+ ++D E+VSV + S ++ +L
Sbjct: 8 GYTAVLDNADGYKFFYPFGWQEVAVKGQDVAFKDVIEPLESVSVSIIKTDKS---NLSEL 64
Query: 158 GPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
G E + ++ + L +++ ++ RV +DG YY E
Sbjct: 65 GSADEVAKALVERVLAS-------PTQKTKLVEAKERV-NDGISYYTFE 105
>gi|126696543|ref|YP_001091429.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9301]
gi|126543586|gb|ABO17828.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L +R +E LG P E G
Sbjct: 39 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISDVNREVQLEQLGSPSEVG 96
Query: 165 RKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYL 204
+ ++ + + G RE +++ + R D Y L
Sbjct: 97 QTLIDKVIAP-----EGSGREVKLINANKRETSDHIFYDL 131
>gi|156104860|ref|NP_001092974.1| vomeronasal 2 receptor, 79 precursor [Rattus norvegicus]
Length = 864
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%)
Query: 29 SLHSQVRQQQQTPLPREALHVTASNEKKNPVMAATQFAVPRRNAMALILSSYIFSDFGFR 88
SLH V QQ R + S K NP++ QF P +A+ L S + D+
Sbjct: 410 SLHKIVMQQIDMEEMRNGGRMKISPWKLNPILKNIQFTNPGGDAVTLNPSEKLHEDYDIL 469
Query: 89 NTALAQQSVGFREYIDTFDGY 109
N Q +G++E + TF Y
Sbjct: 470 NFWNFPQGLGYKEKVGTFSTY 490
>gi|149028120|gb|EDL83558.1| rCG64170 [Rattus norvegicus]
Length = 854
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%)
Query: 29 SLHSQVRQQQQTPLPREALHVTASNEKKNPVMAATQFAVPRRNAMALILSSYIFSDFGFR 88
SLH V QQ R + S K NP++ QF P +A+ L S + D+
Sbjct: 405 SLHKIVMQQIDMEEMRNGGRMKISPWKLNPILKNIQFTNPGGDAVTLNPSEKLHEDYDIL 464
Query: 89 NTALAQQSVGFREYIDTFDGY 109
N Q +G++E + TF Y
Sbjct: 465 NFWNFPQGLGYKEKVGTFSTY 485
>gi|357112832|ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Brachypodium
distachyon]
Length = 226
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 88 RNTALAQQ-SVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSP 146
R++A A++ +R Y+D DGYS+ YP +W G D ++D V ++V V
Sbjct: 62 RSSAYAEEVPKNYRSYVDANDGYSYLYPADWRDFDFLGHDSAFKDKNVQLQSVRVAFIPT 121
Query: 147 SSSRYKSVEDLGPPKE 162
+ + DLGP E
Sbjct: 122 EKT---DIHDLGPMDE 134
>gi|356508949|ref|XP_003523215.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
[Glycine max]
Length = 241
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 102 YIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPK 161
Y D+ +G++ P +W +V AGA + +++ + N+ V + + R K++E+ G P+
Sbjct: 88 YTDSDEGFTLLTPSSWTKVDKAGATVLFQEADMGSNNIGVVV---NPVRLKTLEEFGTPQ 144
Query: 162 EAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K+L+ R +E +++ + R + G Y E
Sbjct: 145 FVADKLLQA------ERRKESTKEVELITVAERSGEGGLQIYEFE 183
>gi|224109586|ref|XP_002315245.1| predicted protein [Populus trichocarpa]
gi|222864285|gb|EEF01416.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
+ ++D DGYS+ YP +WI G D ++D +NV V + K + +L
Sbjct: 84 NYTSFVDFEDGYSYYYPSDWIDFDFRGHDSAFKDRTKQLQNVRVRF---IPTEKKDIHEL 140
Query: 158 GPPKEA 163
GP +EA
Sbjct: 141 GPMEEA 146
>gi|422293804|gb|EKU21104.1| hypothetical protein NGA_0078900 [Nannochloropsis gaditana CCMP526]
Length = 372
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 98 GFREYIDTFDGYSFKYPQNWI 118
GF+ ++DT DGY F+YPQ+W+
Sbjct: 172 GFKRFVDTEDGYEFRYPQSWL 192
>gi|254527172|ref|ZP_05139224.1| PsbP [Prochlorococcus marinus str. MIT 9202]
gi|221538596|gb|EEE41049.1| PsbP [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L ++ +E LG P E G
Sbjct: 39 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISDVNKEVQLEQLGSPSEVG 96
Query: 165 RKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYL 204
+ ++ + + G RE +++ + R A + Y L
Sbjct: 97 QTLIDKVIAP-----EGSGREVKLINANKREASNHIFYDL 131
>gi|194477244|ref|YP_002049423.1| Photosystem II oxygen evolving complex protein PsbP [Paulinella
chromatophora]
gi|171192251|gb|ACB43213.1| Photosystem II oxygen evolving complex protein PsbP [Paulinella
chromatophora]
Length = 187
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 107 DG-YSFKYPQNWIQVRGA-GADIFYRDPYVLDENVSVELS--SPSSSRYKSVEDLGPPKE 162
DG Y+F YP W ++ A GA + + D DE +S+ +S +P S +E LG PKE
Sbjct: 41 DGRYAFLYPTGWTRINVAGGAQLVFHDLINSDETISLLISDVTPES----KLEALGDPKE 96
Query: 163 AGRKVLRQYLTEFMSTRLGV-----RRESN 187
G + + + S R V +RESN
Sbjct: 97 VGEVLQEKIIAPPESGRKAVLIQAHQRESN 126
>gi|33861654|ref|NP_893215.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33634231|emb|CAE19557.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 185
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L ++ +E LG PKE G
Sbjct: 39 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISDVNKEVELEQLGDPKEVG 96
Query: 165 RKVLRQYLTEFMSTR 179
+ ++ + + S R
Sbjct: 97 QTLITKVIAPEGSGR 111
>gi|317970377|ref|ZP_07971767.1| PsbP [Synechococcus sp. CB0205]
Length = 187
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G + + D DE +S+ +S + + S+E+LG G
Sbjct: 41 DGRYAFLYPTGWTRVQVTEGPQVVFHDLINADETLSLVVSDVNET--NSLENLGSAVAVG 98
Query: 165 RKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K+ R + G RE+ ++ S R D GR +Y +E
Sbjct: 99 EKLRRVVIAPD-----GSGREAELVEASER-EDGGRTFYDLE 134
>gi|218192555|gb|EEC74982.1| hypothetical protein OsI_11024 [Oryza sativa Indica Group]
Length = 221
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
++ Y+D+ DGYS+ YP +W G D ++D V + V V + + + DL
Sbjct: 68 NYKSYVDSKDGYSYLYPADWRDFDFLGHDSAFKDRNVALQCVRVGFIPTTKT---DIRDL 124
Query: 158 GPPKEA 163
GP EA
Sbjct: 125 GPMDEA 130
>gi|297722003|ref|NP_001173365.1| Os03g0279950 [Oryza sativa Japonica Group]
gi|222624678|gb|EEE58810.1| hypothetical protein OsJ_10361 [Oryza sativa Japonica Group]
gi|255674406|dbj|BAH92093.1| Os03g0279950 [Oryza sativa Japonica Group]
Length = 232
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
++ Y+D+ DGYS+ YP +W G D ++D V + V V + + + DL
Sbjct: 79 NYKSYVDSKDGYSYLYPADWRDFDFLGHDSAFKDRNVALQCVRVGFIPTTKT---DIRDL 135
Query: 158 GPPKEA 163
GP EA
Sbjct: 136 GPMDEA 141
>gi|357163596|ref|XP_003579784.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
Y D G++ P +W++V AGA ++ N+ V + + R S++D G
Sbjct: 89 LERYTDQDQGFTLLKPASWLKVEKAGATALFQQDGKGSNNIGVVV---NPVRLSSLKDFG 145
Query: 159 PPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQL 218
P+ ++L Q + ST + + ++ST R DG Y +E + + T+
Sbjct: 146 TPEFVADRLL-QAEKKKEST-----KSAEVISTGERSGRDGLTVYEIE----YSLDSTRG 195
Query: 219 LVTRIF 224
+ RIF
Sbjct: 196 GMKRIF 201
>gi|225438398|ref|XP_002274735.1| PREDICTED: psbP domain-containing protein 2, chloroplastic [Vitis
vinifera]
gi|296082589|emb|CBI21594.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 92 LAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRY 151
+AQ+ F+ Y D+ +G++ P +WI+V GA + + + ++ V+ S R
Sbjct: 69 VAQELEEFQRYTDSVEGFTLLIPSSWIKVDKGGATVLFEEE---NKGVNNVGVVVSPVRL 125
Query: 152 KSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
+S++ G P+ KV++ R +++ ++ + R G Y E
Sbjct: 126 ESLKQFGSPQFVADKVIQ------AEKRKESTKDAELIGVAERSGQGGLQVYEFE 174
>gi|297822573|ref|XP_002879169.1| hypothetical protein ARALYDRAFT_481771 [Arabidopsis lyrata subsp.
lyrata]
gi|297325008|gb|EFH55428.1| hypothetical protein ARALYDRAFT_481771 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 56 KNPVMAATQFAVPRRNAMALILSSYIFSDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQ 115
+NP + T+ ++ +R+ IL+ + F+ F + A + + + + Y D+ +G++ P
Sbjct: 44 QNP-SSKTEISLSKRHLNLSILTLF-FNGFFLLDKAKSIEEL--QRYTDSNNGFTLLIPS 99
Query: 116 NWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAGRKVL 168
++ +V AGA+ + +P N+ V + S R KS++ G P+ K++
Sbjct: 100 SYTKVDKAGANALFEEPNNGSNNIGVVV---SPVRIKSLDQFGTPQFVADKLI 149
>gi|157413569|ref|YP_001484435.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9215]
gi|157388144|gb|ABV50849.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L ++ +E LG P E G
Sbjct: 39 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISDVNKEVQLEQLGSPSEVG 96
Query: 165 RKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYL 204
+ ++ + + G R+ +++ + R A + Y L
Sbjct: 97 QTLIDKVIAP-----EGSGRQVKLINANKREASNHIFYDL 131
>gi|266624336|ref|ZP_06117271.1| putative carboxypeptidase T [Clostridium hathewayi DSM 13479]
gi|288863811|gb|EFC96109.1| putative carboxypeptidase T [Clostridium hathewayi DSM 13479]
Length = 391
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 67 VPRRNAMALILSSYIFSDFGFRNTALAQ-------QSVGFREYIDTFDGYSFKYPQNWIQ 119
VP N + LS F R+ +L Q + V + D+F+ Y K+ N
Sbjct: 183 VPMTNPDGVTLSQ--FGIDAIRSDSLKQGIRDCYTRDVTLKRTADSFETYLTKWKAN--- 237
Query: 120 VRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPK-EAGRKVLRQY 171
AG D+ Y PY DE ++ +L+ PSS+ YK P+ +A R ++ QY
Sbjct: 238 --AAGVDLNYNFPYGWDE-LATKLTEPSSASYKGPAPFSEPESQALRTLVDQY 287
>gi|123968737|ref|YP_001009595.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. AS9601]
gi|123198847|gb|ABM70488.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. AS9601]
Length = 185
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L ++ +E LG P E G
Sbjct: 39 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISDVNKEVQLEQLGSPSEVG 96
Query: 165 RKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYL 204
+ ++ + + G R+ +++ + R A + Y L
Sbjct: 97 QTLIDKVIAP-----EGSGRKVKLINANKREASNHIFYDL 131
>gi|356569683|ref|XP_003553026.1| PREDICTED: LOW QUALITY PROTEIN: psbP-like protein 2,
chloroplastic-like [Glycine max]
Length = 104
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 100 REYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGP 159
R ++D DGYS+ YP +W + D ++D Y+ + V V+ S P+ K + DLGP
Sbjct: 47 RAFLDYEDGYSYVYPVDWKEFDFRALDSAFKDRYLQLQIVRVK-SIPTEK--KDIRDLGP 103
>gi|123966422|ref|YP_001011503.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9515]
gi|123200788|gb|ABM72396.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9515]
Length = 194
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L ++ +E LG P E G
Sbjct: 48 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISEVNKEIDLEQLGSPTEVG 105
Query: 165 RKVLRQYLTEFMSTR 179
+ ++ + + S R
Sbjct: 106 QTLIDKVIAPEGSGR 120
>gi|114050517|dbj|BAF30961.1| kinase binding protein [Oryza sativa Japonica Group]
Length = 142
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 98 GFREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDL 157
++ Y+D+ DGYS+ YP +W G D ++D V + V V + + + DL
Sbjct: 47 NYKSYVDSKDGYSYLYPADWRDFDFLGHDSAFKDRNVALQCVRVGFIPTTKT---DIRDL 103
Query: 158 GPPKEA 163
GP EA
Sbjct: 104 GPMDEA 109
>gi|78779492|ref|YP_397604.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9312]
gi|78712991|gb|ABB50168.1| photosystem II oxygen evolving complex protein PsbP
[Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 107 DG-YSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPKEAG 164
DG Y+F YP W +V+ G +I Y D +++ N ++ L ++ +E LG P E G
Sbjct: 39 DGRYAFLYPTGWTRVKVDGGPEIIYHD--LINSNETLSLVISDVNKEVQLEQLGSPSEVG 96
Query: 165 RKVLRQYLTEFMSTR 179
+ ++ + + S R
Sbjct: 97 QTLIDKVIAPEGSGR 111
>gi|326516106|dbj|BAJ88076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 102 YIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLGPPK 161
Y D G++ P +W +V AGA ++ N+ V + + R S+ D G P+
Sbjct: 92 YTDQDQGFTLLKPASWPKVEKAGATALFQQEGKGSNNIGVVV---NPVRLSSLTDFGTPQ 148
Query: 162 EAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVEVSCVWCWNITQLLVT 221
++L Q + ST + + ++ST R DG Y +E + + T+ +
Sbjct: 149 FVAERLL-QAEKKKEST-----KSAEVISTGERSGHDGLTVYEIE----YSLDSTRGGMK 198
Query: 222 RIF 224
RIF
Sbjct: 199 RIF 201
>gi|148241901|ref|YP_001227058.1| photosystem II PsbP protein [Synechococcus sp. RCC307]
gi|147850211|emb|CAK27705.1| Photosystem II PsbP protein [Synechococcus sp. RCC307]
Length = 242
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 93 AQQSVGFREYIDTFDGYSFKYPQNWIQVR-GAGADIFYRDPYVLDENVSVELSSPSSSRY 151
A + G + + Y+F YP W +V G ++ + D DE +S+ ++
Sbjct: 83 AGSAAGLQRFSSADGRYAFLYPTGWSRVAISDGPEVVFHDLINSDETISLVIAPVDPD-- 140
Query: 152 KSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
K +EDLG G K+ R + G RE+ ++ S R D GR +Y +E
Sbjct: 141 KRLEDLGSVVAVGEKLGRTVIAP-----PGSGREAELIEASER-EDLGRTFYDLE 189
>gi|297823835|ref|XP_002879800.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325639|gb|EFH56059.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 228
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 99 FREYIDTFDGYSFKYPQNWIQVRGAGADIFYRDPYVLDENVSVELSSPSSSRYKSVEDLG 158
+ ++D DGYS+ YP +W + D ++D Y+ +NV V + + ++G
Sbjct: 78 YSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKN---DIREVG 134
Query: 159 PPKEAGRKVLRQYLTEFMSTRLGVRRESNILSTSSRVADDGRLYYLVE 206
P +E +++ + + I RV +DGR YY E
Sbjct: 135 PMEEVVYDLVKHKFA-------APNQVATIYDMKERV-EDGRNYYTFE 174
>gi|413953068|gb|AFW85717.1| hypothetical protein ZEAMMB73_055926 [Zea mays]
Length = 277
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 83 SDFGFRNTALAQQSVGFREYIDTFDGYSFKYPQNWIQVRGAGADI-----FYRDPYVLDE 137
+ FG A GF Y D + ++ + PQ W+ G + I FY + D
Sbjct: 111 AQFGITAARRAPDDEGFTTYEDEANKFNIQVPQGWLVGAGEASGIKSVTAFYPEQAATDS 170
Query: 138 NVSVEL--SSPSSSRYKSVEDLGPPKEAGRKVLRQYLTEFMSTRLGVRR 184
NVSV + P + KS D+ E ++R Y E+ S G RR
Sbjct: 171 NVSVAIIEIGPDFTSLKSFGDVAAFAEG---LVRLYYLEYTSQNPGERR 216
>gi|12230757|sp|P82796.1|TL22_SPIOL RecName: Full=Thylakoid lumenal 22 kDa protein; AltName: Full=P22
Length = 20
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 16/20 (80%)
Query: 94 QQSVGFREYIDTFDGYSFKY 113
+QS GFREYID FDGYS Y
Sbjct: 1 EQSAGFREYIDFFDGYSLTY 20
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,302,591,029
Number of Sequences: 23463169
Number of extensions: 127387351
Number of successful extensions: 296506
Number of sequences better than 100.0: 239
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 296241
Number of HSP's gapped (non-prelim): 241
length of query: 231
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 93
effective length of database: 9,121,278,045
effective search space: 848278858185
effective search space used: 848278858185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)