Query 026905
Match_columns 231
No_of_seqs 145 out of 1164
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 14:21:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026905.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026905hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02608 L-ascorbate peroxidas 100.0 5.4E-76 1.2E-80 520.9 20.2 231 1-231 1-231 (289)
2 PLN02879 L-ascorbate peroxidas 100.0 8.5E-73 1.8E-77 492.9 20.5 230 2-231 5-234 (251)
3 PLN02364 L-ascorbate peroxidas 100.0 1.2E-71 2.5E-76 486.3 20.8 230 2-231 4-234 (250)
4 cd00691 ascorbate_peroxidase A 100.0 9.6E-69 2.1E-73 469.3 17.5 227 4-230 2-236 (253)
5 PLN03030 cationic peroxidase; 100.0 3.6E-61 7.9E-66 431.9 12.7 197 23-231 48-295 (324)
6 cd00693 secretory_peroxidase H 100.0 8.7E-60 1.9E-64 421.4 12.9 202 18-231 19-270 (298)
7 cd00692 ligninase Ligninase an 100.0 1.9E-58 4E-63 415.6 17.8 216 15-231 18-262 (328)
8 PF00141 peroxidase: Peroxidas 100.0 6.9E-60 1.5E-64 408.8 5.6 197 17-224 1-230 (230)
9 cd00649 catalase_peroxidase_1 100.0 8E-58 1.7E-62 418.1 18.1 225 7-231 32-380 (409)
10 cd00314 plant_peroxidase_like 100.0 2.5E-56 5.5E-61 391.4 15.5 215 16-230 2-244 (255)
11 TIGR00198 cat_per_HPI catalase 100.0 1.6E-54 3.6E-59 418.4 18.9 224 7-230 42-386 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1E-52 2.2E-57 404.2 18.3 224 7-230 44-392 (726)
13 cd08201 plant_peroxidase_like_ 100.0 4E-52 8.6E-57 363.0 9.3 197 26-229 37-252 (264)
14 cd08200 catalase_peroxidase_2 100.0 8.4E-49 1.8E-53 346.0 16.7 225 3-231 3-284 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 3.3E-43 7.1E-48 340.0 16.8 224 3-231 422-697 (716)
16 PRK15061 catalase/hydroperoxid 100.0 2.2E-42 4.8E-47 332.8 16.5 225 3-231 428-709 (726)
17 COG0376 KatG Catalase (peroxid 100.0 4.9E-37 1.1E-41 284.9 15.9 225 6-230 56-403 (730)
18 COG0376 KatG Catalase (peroxid 99.8 8.5E-21 1.8E-25 177.1 12.4 223 3-230 439-712 (730)
19 PF09533 DUF2380: Predicted li 49.6 23 0.0005 29.8 3.7 32 136-167 107-138 (188)
20 PF15656 Tox-HDC: Toxin with a 35.2 43 0.00092 26.4 3.0 70 145-216 22-95 (119)
21 TIGR01911 HesB_rel_seleno HesB 31.0 49 0.0011 24.4 2.6 32 15-56 8-39 (92)
22 PRK12346 transaldolase A; Prov 29.7 29 0.00062 31.8 1.4 87 74-162 137-241 (316)
23 PF09027 GTPase_binding: GTPas 29.4 23 0.0005 25.0 0.5 12 178-189 31-42 (66)
24 PTZ00411 transaldolase-like pr 28.1 34 0.00075 31.5 1.6 59 104-162 178-252 (333)
25 PRK13859 type IV secretion sys 27.6 35 0.00076 22.9 1.1 31 94-124 9-42 (55)
26 PF00043 GST_C: Glutathione S- 25.6 1.9E+02 0.0041 20.1 4.9 35 73-107 34-73 (95)
27 KOG0693 Myo-inositol-1-phospha 21.4 2.1E+02 0.0046 27.1 5.3 90 6-116 198-290 (512)
No 1
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=5.4e-76 Score=520.94 Aligned_cols=231 Identities=87% Similarity=1.382 Sum_probs=224.4
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHcCCcccchhhhheeecCCCccCCCCCCCCCccCChhhccCCCCCchHHHHHHHH
Q 026905 1 MALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCE 80 (231)
Q Consensus 1 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~~e~~~~~N~gl~~~~~~i~ 80 (231)
|+-|+++++|+++|+++|++|+++++++.++|.+|||+||||+|||.++++|||||||++++|+++++|.||++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid 80 (289)
T PLN02608 1 MAAPVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCE 80 (289)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHHhhCCCCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCCCCCCCCCCCChHHHHHHHHHcCCCcccceeecccc
Q 026905 81 EVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGH 160 (231)
Q Consensus 81 ~~k~~~p~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaH 160 (231)
++|+++|+|||||||+||||+||+++|||.|+|++||+|+++++++++||.|+.+++++++.|+++||+++|||+|+|||
T Consensus 81 ~iK~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGAH 160 (289)
T PLN02608 81 PVKAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGGH 160 (289)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcccc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCccChHHHHHHhhcccCCcccccchhhcccChhhHHHHHHHhhChhhhhcC
Q 026905 161 TLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKVNALILTK 231 (231)
Q Consensus 161 tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~~F~~~ 231 (231)
|||++||.+++|.|+|+.||.+|||+||++|+.++++|+++|+||++|++|++|+.+|++||.||+.||++
T Consensus 161 TiG~ahc~r~g~~g~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~ 231 (289)
T PLN02608 161 TLGRAHPERSGFDGPWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRD 231 (289)
T ss_pred ccccccccCCCCCCCCCCCCCccChHHHHHHHcCCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHH
Confidence 99999999988889999999999999999999996569988999999999999999999999999999863
No 2
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=8.5e-73 Score=492.87 Aligned_cols=230 Identities=61% Similarity=1.043 Sum_probs=223.6
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHcCCcccchhhhheeecCCCccCCCCCCCCCccCChhhccCCCCCchHHHHHHHHH
Q 026905 2 ALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEE 81 (231)
Q Consensus 2 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~~e~~~~~N~gl~~~~~~i~~ 81 (231)
+.|.+..+|.+++++++++|.+++.++.++|.+|||+||||+|||..++.|||||||+|.+|+++|+|.||+.++++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~i~~ 84 (251)
T PLN02879 5 SYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRLLDP 84 (251)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHHHHH
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHhhCCCCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCCCCCCCCCCCChHHHHHHHHHcCCCcccceeeccccc
Q 026905 82 VKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHT 161 (231)
Q Consensus 82 ~k~~~p~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaHt 161 (231)
||+++++|||||||+||+++||+.+|||.|+|++||+|+.+++++++||.|+.++++|++.|+++||+++|||||+||||
T Consensus 85 iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGaHT 164 (251)
T PLN02879 85 IKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHT 164 (251)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecccc
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCccChHHHHHHhhcccCCcccccchhhcccChhhHHHHHHHhhChhhhhcC
Q 026905 162 LGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKVNALILTK 231 (231)
Q Consensus 162 iG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~~F~~~ 231 (231)
||++||.++|++|+|+.||.+|||+||++|+.++++|+++|+||++|+.|++|+++|++||.||+.||++
T Consensus 165 iG~ah~~r~g~~g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~ 234 (251)
T PLN02879 165 LGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFED 234 (251)
T ss_pred ccccccccccCCCCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHH
Confidence 9999999999999999999999999999999996569988999999999999999999999999999863
No 3
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.2e-71 Score=486.34 Aligned_cols=230 Identities=60% Similarity=1.034 Sum_probs=221.9
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHcCCcccchhhhheeecCCCccCCCCCCCCCccCChhhccCCCCCchHHHHHHHHH
Q 026905 2 ALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEE 81 (231)
Q Consensus 2 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~~e~~~~~N~gl~~~~~~i~~ 81 (231)
+.|.++.+|.+++++++++|++++.+++++|.||||+||||+|||.....|||||||++++|+++++|.||.+++++|+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~i~~ 83 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRLLDP 83 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHhhCCCCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCCCCCCCCCCCChHHHHHHHHH-cCCCcccceeecccc
Q 026905 82 VKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYR-MGLSDKDIVALSGGH 160 (231)
Q Consensus 82 ~k~~~p~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~-~Gl~~~e~VaL~GaH 160 (231)
||+++++|||||||+||||+||+++|||.|+|++||+|+++++++++||.|..++++|++.|++ +|||++|||+|+|||
T Consensus 84 ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~d~VaLsGaH 163 (250)
T PLN02364 84 IREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAH 163 (250)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHHHHhcCCCHHHheeeecce
Confidence 9999999999999999999999999999999999999999999888999999999999999997 599999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCccChHHHHHHhhcccCCcccccchhhcccChhhHHHHHHHhhChhhhhcC
Q 026905 161 TLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKVNALILTK 231 (231)
Q Consensus 161 tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~~F~~~ 231 (231)
|||++||.++++.|+|+.||.+|||+||++|+.++++|+++|+||++|+.|++|+.+|++||.|++.|+++
T Consensus 164 TiG~~hc~r~~~~g~~~~tp~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~ 234 (250)
T PLN02364 164 TLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFAD 234 (250)
T ss_pred eeccccCCCCCCCCCCCCCCCccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHH
Confidence 99999999999999999999999999999999996569988899999999999999999999999999863
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=9.6e-69 Score=469.30 Aligned_cols=227 Identities=63% Similarity=1.070 Sum_probs=214.3
Q ss_pred CccchhhHHH-HHHHHHHHHHHHHcCCcccchhhhheeecCCCccCCCCCCCCCccCChhhccCCCCCchHHHHHHHHHH
Q 026905 4 PVVDTEYLKE-IDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEV 82 (231)
Q Consensus 4 ~~~~~~y~~~-~~~~~~~~~~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~~e~~~~~N~gl~~~~~~i~~~ 82 (231)
|+|+.-|... ++.+++.|++++.++.++|++|||+||||++||++++.|||||++++.+|+++++|.+|.+++++|++|
T Consensus 2 ~~~~~~~~~~~~~~V~~~v~~~~~~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~i 81 (253)
T cd00691 2 PVVSAAYAAKDLEAARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPI 81 (253)
T ss_pred CcccccccHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHH
Confidence 8999888655 788899998887799999999999999999999999999999999998999999999998899999999
Q ss_pred HhhCCCCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCC---CCCCCCCCCCChHHHHHHHHHcCCCcccceeeccc
Q 026905 83 KAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISP---KEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGG 159 (231)
Q Consensus 83 k~~~p~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~Ga 159 (231)
|+++|+|||||||+|||++||+.+|||.|+|++||+|+.++. ++++||.|..+++++++.|+++||+++|||+|+||
T Consensus 82 K~~~~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 82 KKKYPDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 999999999999999999999999999999999999999887 56789999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCccChHHHHHHhhccc----CCcccccchhhcccChhhHHHHHHHhhChhhhhc
Q 026905 160 HTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGES----EGLLQLPTDKALLEDPEFRRYVELYAKVNALILT 230 (231)
Q Consensus 160 HtiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~~----~gl~~l~SD~~L~~d~~t~~~V~~yA~~~~~F~~ 230 (231)
||||++||.++++.|+|+.||.+|||+||++|+.+++ +++++|+||++|+.|++|+++|++||.|++.|++
T Consensus 162 HTiG~a~c~~~~~~g~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~ 236 (253)
T cd00691 162 HTLGRCHKERSGYDGPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFFK 236 (253)
T ss_pred ceeecccccCCCCCCCCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHHHcCccHHHHHHHHhhCHHHHHH
Confidence 9999999998888888899999999999999999984 3455589999999999999999999999999986
No 5
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=3.6e-61 Score=431.85 Aligned_cols=197 Identities=29% Similarity=0.410 Sum_probs=176.3
Q ss_pred HHHHcCCcccchhhhheeecCCCccCCCCCCCCCccCCh---hhccCCCCCchHHHHHHHHHHHhh----CC-CCcHHHH
Q 026905 23 ALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNE---EEYSHGSNNGLKIALDFCEEVKAK----HP-KITYADL 94 (231)
Q Consensus 23 ~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~---~e~~~~~N~gl~~~~~~i~~~k~~----~p-~vS~ADi 94 (231)
++.+|++++|++|||+||||| ++||||||+++ .|+++++|.+| +++++|+.+|++ || +||||||
T Consensus 48 ~~~~d~~~aa~llRL~FHDCf-------v~GCDaSvLl~~~~~Ek~a~~N~~l-~Gf~~i~~iK~~~e~~CPg~VSCADi 119 (324)
T PLN03030 48 HFQSNPAIAPGLLRMHFHDCF-------VRGCDASILIDGSNTEKTALPNLLL-RGYDVIDDAKTQLEAACPGVVSCADI 119 (324)
T ss_pred HHhhCcccchhhhhhhhhhhe-------ecCCceEEeeCCCcccccCCCCcCc-chHHHHHHHHHHHHhhCCCcccHHHH
Confidence 466799999999999999999 89999999974 69999999998 699999999964 99 8999999
Q ss_pred HHHHhhHHHHhcCCCcccCCCCcCCCCCCC--CCCCCCCCCCChHHHHHHHHHcCCCcccceeeccccccccCCCCCC--
Q 026905 95 YQLAGVVAVEVTGGPTVDFVPGRKDSKISP--KEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERS-- 170 (231)
Q Consensus 95 ialAa~~av~~~GgP~~~v~~GR~D~~~s~--~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaHtiG~~~~~~~-- 170 (231)
|++|||+||.++|||.|+|++||+|+++|. ...+||.|+.++++|++.|+++||+.+|||+||||||||++||...
T Consensus 120 lalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~ 199 (324)
T PLN03030 120 LALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRY 199 (324)
T ss_pred HHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeecccc
Confidence 999999999999999999999999998875 3358999999999999999999999999999999999999999531
Q ss_pred ---CCCC-------------------------C-------CCCCCCccChHHHHHHhhcccCCcccccchhhcccChhhH
Q 026905 171 ---GFDG-------------------------P-------WTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFR 215 (231)
Q Consensus 171 ---~~~g-------------------------~-------~~~tp~~fDN~Yy~~ll~~~~~gl~~l~SD~~L~~d~~t~ 215 (231)
+|.+ . +..||.+|||+||++|+.++ |+ |+|||+|++|++|+
T Consensus 200 Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~~r--Gl--L~SDq~L~~d~~T~ 275 (324)
T PLN03030 200 RLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLKNGR--GI--LESDQKLWTDASTR 275 (324)
T ss_pred ccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHHhcC--CC--cCCchHhhcCccHH
Confidence 1110 0 23689999999999999998 98 79999999999999
Q ss_pred HHHHHHhhCh----hhhhcC
Q 026905 216 RYVELYAKVN----ALILTK 231 (231)
Q Consensus 216 ~~V~~yA~~~----~~F~~~ 231 (231)
++|++||.|+ +.||++
T Consensus 276 ~~V~~~A~~~~~~~~~F~~~ 295 (324)
T PLN03030 276 TFVQRFLGVRGLAGLNFNVE 295 (324)
T ss_pred HHHHHHhcccccchhhhHHH
Confidence 9999999875 488863
No 6
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.7e-60 Score=421.35 Aligned_cols=202 Identities=38% Similarity=0.580 Sum_probs=179.4
Q ss_pred HHHHHH-HHHcCCcccchhhhheeecCCCccCCCCCCCCCccCCh------hhccCCCCCchHHHHHHHHHHHhh----C
Q 026905 18 RRDLRA-LIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNE------EEYSHGSNNGLKIALDFCEEVKAK----H 86 (231)
Q Consensus 18 ~~~~~~-~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~------~e~~~~~N~gl~~~~~~i~~~k~~----~ 86 (231)
++.|++ +..+++++|++|||+||||+ ++||||||+++ +|+++++|.++ +++++|+.+|++ |
T Consensus 19 ~~~v~~~~~~~~~~a~~~lRl~FHDc~-------v~GcDaSill~~~~~~~~E~~~~~N~~l-~g~~~i~~iK~~~e~~c 90 (298)
T cd00693 19 RSVVRAAVKADPRLAAALLRLHFHDCF-------VRGCDASVLLDSTANNTSEKDAPPNLSL-RGFDVIDDIKAALEAAC 90 (298)
T ss_pred HHHHHHHHHhCCCcCchhhhhhhHhhh-------ccCcceeEEecCCCCCchhccCCCCCCc-chhHHHHHHHHHHHhhC
Confidence 344443 56789999999999999999 79999999863 69999999999 699999999964 8
Q ss_pred C-CCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCC--CCCCCCCCCChHHHHHHHHHcCCCcccceeeccccccc
Q 026905 87 P-KITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPK--EGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLG 163 (231)
Q Consensus 87 p-~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~--~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaHtiG 163 (231)
| +|||||||+||||+||+++|||.|+|++||+|+.++.+ .+.||.|+.+++++++.|+++||+++|||+|+||||||
T Consensus 91 p~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~d~VaL~GaHTiG 170 (298)
T cd00693 91 PGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIG 170 (298)
T ss_pred CCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHHHHcCCCHHHheeecccceee
Confidence 8 99999999999999999999999999999999987653 36899999999999999999999999999999999999
Q ss_pred cCCCC----C-CCCCC--------------------CCC-----------CCCCccChHHHHHHhhcccCCcccccchhh
Q 026905 164 RAHPE----R-SGFDG--------------------PWT-----------REPLKFDNSYFVELLNGESEGLLQLPTDKA 207 (231)
Q Consensus 164 ~~~~~----~-~~~~g--------------------~~~-----------~tp~~fDN~Yy~~ll~~~~~gl~~l~SD~~ 207 (231)
++||. | .+|.| ++. .||.+|||+||++|+.++ |+ |+|||+
T Consensus 171 ~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~--gl--L~SD~~ 246 (298)
T cd00693 171 RAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR--GL--LTSDQA 246 (298)
T ss_pred eeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcc--cC--ccCCHH
Confidence 99995 2 23321 121 789999999999999997 87 799999
Q ss_pred cccChhhHHHHHHHhhChhhhhcC
Q 026905 208 LLEDPEFRRYVELYAKVNALILTK 231 (231)
Q Consensus 208 L~~d~~t~~~V~~yA~~~~~F~~~ 231 (231)
|+.|++|+++|++||.||++||++
T Consensus 247 L~~d~~t~~~V~~~A~d~~~F~~~ 270 (298)
T cd00693 247 LLSDPRTRAIVNRYAANQDAFFRD 270 (298)
T ss_pred hccCccHHHHHHHHhhCHHHHHHH
Confidence 999999999999999999999863
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.9e-58 Score=415.63 Aligned_cols=216 Identities=28% Similarity=0.416 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHH-cCCc---ccchhhhheeecCCCc-----cCCCCCCCCCccCCh--hhccCCCCCchHHHHHHHHHHH
Q 026905 15 DKARRDLRALIA-YKNC---APIMLRLAWHDAGTYD-----VNTKTGGPNGSIRNE--EEYSHGSNNGLKIALDFCEEVK 83 (231)
Q Consensus 15 ~~~~~~~~~~~~-~~~~---a~~~lRl~FHDc~t~d-----~s~~~gG~dgsi~~~--~e~~~~~N~gl~~~~~~i~~~k 83 (231)
..++++|++.+. +.++ |+.+|||+||||++|| ...+.|||||||++. .|+++++|.||+.+++.|++++
T Consensus 18 ~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~vvd~lk~~~ 97 (328)
T cd00692 18 FDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEIVEALRPFH 97 (328)
T ss_pred HHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHHHHHHHHHH
Confidence 346778888764 4444 6679999999999999 467889999999864 5999999999998888888888
Q ss_pred hhCCCCcHHHHHHHHhhHHHHhc-CCCcccCCCCcCCCCCCCCCCCCCCCCCChHHHHHHHHHcCCCcccceeecccccc
Q 026905 84 AKHPKITYADLYQLAGVVAVEVT-GGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTL 162 (231)
Q Consensus 84 ~~~p~vS~ADiialAa~~av~~~-GgP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaHti 162 (231)
++++ |||||||+|||++||+.| |||.|+|++||+|++++.++++||.|+.++++|++.|+++||+++|||+|+|||||
T Consensus 98 e~~c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F~~~Gf~~~E~VaLsGAHTi 176 (328)
T cd00692 98 QKHN-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARFADAGFSPDELVALLAAHSV 176 (328)
T ss_pred HhcC-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHHHHcCCCHHHHhhhcccccc
Confidence 8765 999999999999999965 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCC-CCCCCCCccChHHHHHHhh-ccc---------------CCcccccchhhcccChhhHHHHHHHhhCh
Q 026905 163 GRAHPERSGFDG-PWTREPLKFDNSYFVELLN-GES---------------EGLLQLPTDKALLEDPEFRRYVELYAKVN 225 (231)
Q Consensus 163 G~~~~~~~~~~g-~~~~tp~~fDN~Yy~~ll~-~~~---------------~gl~~l~SD~~L~~d~~t~~~V~~yA~~~ 225 (231)
|++|......+| +|+.||.+|||+||++++. ++. +|+++|+||++|+.|++|+.+|++||.||
T Consensus 177 G~a~~~Dps~~g~p~D~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq 256 (328)
T cd00692 177 AAQDFVDPSIAGTPFDSTPGVFDTQFFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQ 256 (328)
T ss_pred cccCCCCCCCCCCCCCCCcchhcHHHHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCH
Confidence 999965444444 7899999999999999874 431 35677999999999999999999999999
Q ss_pred hhhhcC
Q 026905 226 ALILTK 231 (231)
Q Consensus 226 ~~F~~~ 231 (231)
++||++
T Consensus 257 ~~f~~~ 262 (328)
T cd00692 257 AKMNAA 262 (328)
T ss_pred HHHHHH
Confidence 999863
No 8
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=6.9e-60 Score=408.76 Aligned_cols=197 Identities=46% Similarity=0.707 Sum_probs=170.1
Q ss_pred HHHHHHHH-HHcCCcccchhhhheeecCCCccCCCCCCCCCccCC-hhhccCCCCCchHHHHHHHHHHHhh----CC-CC
Q 026905 17 ARRDLRAL-IAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRN-EEEYSHGSNNGLKIALDFCEEVKAK----HP-KI 89 (231)
Q Consensus 17 ~~~~~~~~-~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~-~~e~~~~~N~gl~~~~~~i~~~k~~----~p-~v 89 (231)
+|++|++. ..+++++|+||||+||||++| |||||||++ .+|+++++|.||++++++|++||++ || +|
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~V 74 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVV 74 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcccccCCC
Confidence 46677664 457999999999999999944 999999965 7899999999998899999999975 88 89
Q ss_pred cHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCCCC--CCCCCCCChHHHHHHHHHcCCCcccceeeccccccccCCC
Q 026905 90 TYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEG--RLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHP 167 (231)
Q Consensus 90 S~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaHtiG~~~~ 167 (231)
||||||+||+++||+.+|||.|+|++||+|+.++++.+ +||.|..++++|++.|+++|||++|||||+||||||++||
T Consensus 75 S~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 75 SCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp -HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred CHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999998643 5999999999999999999999999999999999999999
Q ss_pred CCCC---------CC--------------C-CCCCCCCccChHHHHHHhhcccCCcccccchhhcccChhhHHHHHHHhh
Q 026905 168 ERSG---------FD--------------G-PWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAK 223 (231)
Q Consensus 168 ~~~~---------~~--------------g-~~~~tp~~fDN~Yy~~ll~~~~~gl~~l~SD~~L~~d~~t~~~V~~yA~ 223 (231)
.... ++ . +++ ||.+|||+||++|++++ |+ |.||++|++|++|+++|++||+
T Consensus 155 ~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~d-tp~~fDN~Yy~~ll~~~--gl--l~SD~~L~~d~~t~~~V~~yA~ 229 (230)
T PF00141_consen 155 SSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLD-TPTVFDNSYYKNLLNGR--GL--LPSDQALLNDPETRPIVERYAQ 229 (230)
T ss_dssp GCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESS-STTS-SSHHHHHHHHTE--EE--EHHHHHHHHSTTHHHHHHHHHH
T ss_pred ccccccccccccccccccceeccCCCcccccccc-CCCcchhHHHHHHhcCC--Cc--CHHHHHHhcCHHHHHHHHHHhc
Confidence 6211 00 0 123 89999999999999987 77 7999999999999999999998
Q ss_pred C
Q 026905 224 V 224 (231)
Q Consensus 224 ~ 224 (231)
|
T Consensus 230 d 230 (230)
T PF00141_consen 230 D 230 (230)
T ss_dssp T
T ss_pred C
Confidence 6
No 9
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=8e-58 Score=418.06 Aligned_cols=225 Identities=36% Similarity=0.579 Sum_probs=203.2
Q ss_pred chhhHHH-----HHHHHHHHHHHHHcC---------CcccchhhhheeecCCCccCCCCCCCC-CccCChhhccCCCCCc
Q 026905 7 DTEYLKE-----IDKARRDLRALIAYK---------NCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNG 71 (231)
Q Consensus 7 ~~~y~~~-----~~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~t~d~s~~~gG~d-gsi~~~~e~~~~~N~g 71 (231)
+++|.++ +++++++|++++.+. .++|.+|||+||+++|||.+++.||++ |+|||++|.+++.|.|
T Consensus 32 ~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~g 111 (409)
T cd00649 32 DFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVN 111 (409)
T ss_pred CCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhh
Confidence 3567666 488899999998764 689999999999999999999999998 6999999999999999
Q ss_pred hHHHHHHHHHHHhhCC-CCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCC--------------------------
Q 026905 72 LKIALDFCEEVKAKHP-KITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISP-------------------------- 124 (231)
Q Consensus 72 l~~~~~~i~~~k~~~p-~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~-------------------------- 124 (231)
|++++.+|++||+++| .||+||+|+||+++|||.+|||.|+|.+||.|+..+.
T Consensus 112 L~~a~~~L~pik~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~p 191 (409)
T cd00649 112 LDKARRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENP 191 (409)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccc
Confidence 9999999999999998 7999999999999999999999999999999996532
Q ss_pred ------------CCC--CCCCCCCChHHHHHHHHHcCCCcccceee-ccccccccCCCCC--------------------
Q 026905 125 ------------KEG--RLPDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPER-------------------- 169 (231)
Q Consensus 125 ------------~~~--~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL-~GaHtiG~~~~~~-------------------- 169 (231)
|++ .+|.|..++.+|++.|.+||||.+||||| +||||||++||..
T Consensus 192 l~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLg 271 (409)
T cd00649 192 LAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLG 271 (409)
T ss_pred hhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhc
Confidence 233 68999999999999999999999999999 5999999999952
Q ss_pred ---------------CCCCCCCCCCCCccChHHHHHHhhccc--------------------------------CCcccc
Q 026905 170 ---------------SGFDGPWTREPLKFDNSYFVELLNGES--------------------------------EGLLQL 202 (231)
Q Consensus 170 ---------------~~~~g~~~~tp~~fDN~Yy~~ll~~~~--------------------------------~gl~~l 202 (231)
++++|+|+.||.+|||+||++|+..+| .++.+|
T Consensus 272 w~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL 351 (409)
T cd00649 272 WKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMML 351 (409)
T ss_pred ccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccc
Confidence 357788999999999999999998432 155678
Q ss_pred cchhhcccChhhHHHHHHHhhChhhhhcC
Q 026905 203 PTDKALLEDPEFRRYVELYAKVNALILTK 231 (231)
Q Consensus 203 ~SD~~L~~d~~t~~~V~~yA~~~~~F~~~ 231 (231)
+||++|+.|++|+.+|++||.|++.||++
T Consensus 352 ~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~d 380 (409)
T cd00649 352 TTDLALRFDPEYEKISRRFLENPDEFADA 380 (409)
T ss_pred hhhHhhhcCccHHHHHHHHhcCHHHHHHH
Confidence 99999999999999999999999999863
No 10
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=2.5e-56 Score=391.36 Aligned_cols=215 Identities=45% Similarity=0.674 Sum_probs=194.0
Q ss_pred HHHHHHHH-HHHcCCcccchhhhheeecCCCccCC-CCCCCCCccCChhhccCCCCCchHHHHHHHHHHHhhCC---CCc
Q 026905 16 KARRDLRA-LIAYKNCAPIMLRLAWHDAGTYDVNT-KTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHP---KIT 90 (231)
Q Consensus 16 ~~~~~~~~-~~~~~~~a~~~lRl~FHDc~t~d~s~-~~gG~dgsi~~~~e~~~~~N~gl~~~~~~i~~~k~~~p---~vS 90 (231)
.++++|.+ +.+++.+++++|||+||||++++.++ +.|||||||++.+|+++|+|.++.+++++|+++|.+++ +||
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~~~~~vS 81 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYDGGNPVS 81 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcCCCCccc
Confidence 34556654 34578999999999999999999987 78999999999999999999998899999999999985 799
Q ss_pred HHHHHHHHhhHHHHhc--CCCcccCCCCcCCCC-----CCCCCCCCCCCCCChHHHHHHHHHcCCCcccceeec-ccccc
Q 026905 91 YADLYQLAGVVAVEVT--GGPTVDFVPGRKDSK-----ISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALS-GGHTL 162 (231)
Q Consensus 91 ~ADiialAa~~av~~~--GgP~~~v~~GR~D~~-----~s~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~-GaHti 162 (231)
|||||++|+++||+.+ |||.|+|++||+|+. .+.|.+++|.|..+++++++.|+++||+++|||||+ |+|||
T Consensus 82 ~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VAL~~GaHti 161 (255)
T cd00314 82 RADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVALSAGAHTL 161 (255)
T ss_pred HHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHhhccCCeec
Confidence 9999999999999999 999999999999999 455778889999999999999999999999999999 99999
Q ss_pred -ccCCCCCCCCC--CCCCCCCCccChHHHHHHhhcccC------------CcccccchhhcccChhhHHHHHHHhhChhh
Q 026905 163 -GRAHPERSGFD--GPWTREPLKFDNSYFVELLNGESE------------GLLQLPTDKALLEDPEFRRYVELYAKVNAL 227 (231)
Q Consensus 163 -G~~~~~~~~~~--g~~~~tp~~fDN~Yy~~ll~~~~~------------gl~~l~SD~~L~~d~~t~~~V~~yA~~~~~ 227 (231)
|++||...+.. ++|+.||.+|||+||++|+.++|. ++.+|+||++|+.|++|+.+|++||.|+++
T Consensus 162 ~G~~~~~~~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~ 241 (255)
T cd00314 162 GGKNHGDLLNYEGSGLWTSTPFTFDNAYFKNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEK 241 (255)
T ss_pred cCcccCCCCCcccCCCCCCCCCccchHHHHHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHH
Confidence 99999766543 678899999999999999998753 234489999999999999999999999999
Q ss_pred hhc
Q 026905 228 ILT 230 (231)
Q Consensus 228 F~~ 230 (231)
|++
T Consensus 242 f~~ 244 (255)
T cd00314 242 FFE 244 (255)
T ss_pred HHH
Confidence 986
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.6e-54 Score=418.40 Aligned_cols=224 Identities=36% Similarity=0.556 Sum_probs=200.9
Q ss_pred chhhHHHH-----HHHHHHHHHHHHcC---------CcccchhhhheeecCCCccCCCCCCCC-CccCChhhccCCCCCc
Q 026905 7 DTEYLKEI-----DKARRDLRALIAYK---------NCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNG 71 (231)
Q Consensus 7 ~~~y~~~~-----~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~t~d~s~~~gG~d-gsi~~~~e~~~~~N~g 71 (231)
+++|.+++ ++++++|++++.+. .++|.+|||+||+++|||.+++.||++ |+|||.+|++||.|.+
T Consensus 42 ~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~ 121 (716)
T TIGR00198 42 DFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVN 121 (716)
T ss_pred CccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhh
Confidence 47888776 66899999998764 689999999999999999999999996 6999999999999999
Q ss_pred hHHHHHHHHHHHhhCC-CCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCC--------------------------
Q 026905 72 LKIALDFCEEVKAKHP-KITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISP-------------------------- 124 (231)
Q Consensus 72 l~~~~~~i~~~k~~~p-~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~-------------------------- 124 (231)
|++++.+|++||++|| .|||||||+|||++||+.+|||.|+|.+||+|+..+.
T Consensus 122 Ldka~~lL~pIk~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~ 201 (716)
T TIGR00198 122 LDKARRLLWPIKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPL 201 (716)
T ss_pred HHHHHHHHHHHHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccc
Confidence 9999999999999999 8999999999999999999999999999999994321
Q ss_pred -----------CCC--CCCCCCCChHHHHHHHHHcCCCcccceeec-cccccccCCCCC---------------------
Q 026905 125 -----------KEG--RLPDAKRGAPHLRDIFYRMGLSDKDIVALS-GGHTLGRAHPER--------------------- 169 (231)
Q Consensus 125 -----------~~~--~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~-GaHtiG~~~~~~--------------------- 169 (231)
+++ .+|.|..++.+|++.|.++|||.+|||||+ ||||||++||..
T Consensus 202 a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~ 281 (716)
T TIGR00198 202 AATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGW 281 (716)
T ss_pred hhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhcc
Confidence 122 589999999999999999999999999996 999999999951
Q ss_pred --------------CCCCCCCCCCCCccChHHHHHHhhccc------------------------------CCcccccch
Q 026905 170 --------------SGFDGPWTREPLKFDNSYFVELLNGES------------------------------EGLLQLPTD 205 (231)
Q Consensus 170 --------------~~~~g~~~~tp~~fDN~Yy~~ll~~~~------------------------------~gl~~l~SD 205 (231)
++++|+|+.||.+|||+||++|+.++| ....+|+||
T Consensus 282 ~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SD 361 (716)
T TIGR00198 282 HNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDAD 361 (716)
T ss_pred cCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchh
Confidence 345688999999999999999998632 024558999
Q ss_pred hhcccChhhHHHHHHHhhChhhhhc
Q 026905 206 KALLEDPEFRRYVELYAKVNALILT 230 (231)
Q Consensus 206 ~~L~~d~~t~~~V~~yA~~~~~F~~ 230 (231)
++|..|++|+++|++||.|++.|++
T Consensus 362 laL~~Dp~~r~iVe~yA~d~~~F~~ 386 (716)
T TIGR00198 362 LALRFDPEFRKISRRFLREPDYFAE 386 (716)
T ss_pred HHhccCccHHHHHHHHhcCHHHHHH
Confidence 9999999999999999999999986
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1e-52 Score=404.21 Aligned_cols=224 Identities=36% Similarity=0.575 Sum_probs=201.4
Q ss_pred chhhHHHH-----HHHHHHHHHHHHcC---------CcccchhhhheeecCCCccCCCCCCCC-CccCChhhccCCCCCc
Q 026905 7 DTEYLKEI-----DKARRDLRALIAYK---------NCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNG 71 (231)
Q Consensus 7 ~~~y~~~~-----~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~t~d~s~~~gG~d-gsi~~~~e~~~~~N~g 71 (231)
+++|..++ ++++++|++++.+. .+.|.+|||+||+++|||.+++.||++ |+|||.+|.+||.|.+
T Consensus 44 ~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~g 123 (726)
T PRK15061 44 DFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVN 123 (726)
T ss_pred CCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhh
Confidence 46787665 78899999998764 689999999999999999999999997 6999999999999999
Q ss_pred hHHHHHHHHHHHhhCC-CCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCC-------------------------
Q 026905 72 LKIALDFCEEVKAKHP-KITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPK------------------------- 125 (231)
Q Consensus 72 l~~~~~~i~~~k~~~p-~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~------------------------- 125 (231)
|++++.+|++||+++| .||+||+|+||+.+|||.+|||.|+|.+||.|...+..
T Consensus 124 L~ka~~~L~pik~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~ 203 (726)
T PRK15061 124 LDKARRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLEN 203 (726)
T ss_pred HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccccccccccccccccc
Confidence 9999999999999998 89999999999999999999999999999999864321
Q ss_pred --------------C--CCCCCCCCChHHHHHHHHHcCCCcccceeec-cccccccCCCCC-------------------
Q 026905 126 --------------E--GRLPDAKRGAPHLRDIFYRMGLSDKDIVALS-GGHTLGRAHPER------------------- 169 (231)
Q Consensus 126 --------------~--~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~-GaHtiG~~~~~~------------------- 169 (231)
+ .-+|.|..++.+|++.|.+||||.+|||||+ ||||||++||..
T Consensus 204 pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgL 283 (726)
T PRK15061 204 PLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGL 283 (726)
T ss_pred chhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhc
Confidence 1 1278999999999999999999999999995 999999999941
Q ss_pred ----------------CCCCCCCCCCCCccChHHHHHHhhccc--------------------------------CCccc
Q 026905 170 ----------------SGFDGPWTREPLKFDNSYFVELLNGES--------------------------------EGLLQ 201 (231)
Q Consensus 170 ----------------~~~~g~~~~tp~~fDN~Yy~~ll~~~~--------------------------------~gl~~ 201 (231)
++++|+|+.||.+|||+||++|+.++| .++.|
T Consensus 284 gw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~M 363 (726)
T PRK15061 284 GWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTM 363 (726)
T ss_pred cccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCccc
Confidence 356788999999999999999998742 13567
Q ss_pred ccchhhcccChhhHHHHHHHhhChhhhhc
Q 026905 202 LPTDKALLEDPEFRRYVELYAKVNALILT 230 (231)
Q Consensus 202 l~SD~~L~~d~~t~~~V~~yA~~~~~F~~ 230 (231)
|+||++|..||+++.+|++||.|++.||+
T Consensus 364 LtSD~AL~~DP~~r~iV~~fA~d~~~F~~ 392 (726)
T PRK15061 364 LTTDLALRFDPEYEKISRRFLENPEEFAD 392 (726)
T ss_pred ccccHHhhcCCcHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999999999986
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=4e-52 Score=363.01 Aligned_cols=197 Identities=29% Similarity=0.442 Sum_probs=165.6
Q ss_pred HcCCcccchhhhheeecCCCccCCCCCCCCCccCChhhccCCCCCchH--HHHHHHHHHHhhCCCCcHHHHHHHHhhHHH
Q 026905 26 AYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLK--IALDFCEEVKAKHPKITYADLYQLAGVVAV 103 (231)
Q Consensus 26 ~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~~e~~~~~N~gl~--~~~~~i~~~k~~~p~vS~ADiialAa~~av 103 (231)
.++.++++||||+||||+|||...++|||||||++ |...++|.|+. ..+..++.++. +.||||||||||+++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~~--~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFYS--PRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeecc--CccCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999998 57788998875 34455555533 48999999999999999
Q ss_pred HhcCCCcccCCCCcCCCCCCCCCCCCCCCCCChHHHHHHHHHcCCCcccceeecc-ccccccCCCCCC------CCC--C
Q 026905 104 EVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSG-GHTLGRAHPERS------GFD--G 174 (231)
Q Consensus 104 ~~~GgP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~G-aHtiG~~~~~~~------~~~--g 174 (231)
+.||||.|+|++||+|++.+.+.+ ||.|+.++++|++.|+++||+++|||+|+| |||||++||..+ ++. +
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~~ 191 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPDT 191 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeecccccchhhcCCccccCC
Confidence 999999999999999999998876 999999999999999999999999999996 999999999865 333 3
Q ss_pred --CCCCCCCccChHHHHHHhhcccCCcccc------cchhhcccChhhHHHHHHHhhChhhhh
Q 026905 175 --PWTREPLKFDNSYFVELLNGESEGLLQL------PTDKALLEDPEFRRYVELYAKVNALIL 229 (231)
Q Consensus 175 --~~~~tp~~fDN~Yy~~ll~~~~~gl~~l------~SD~~L~~d~~t~~~V~~yA~~~~~F~ 229 (231)
+|+.||.+|||+||.+++++.++|+|++ .||..+++...-+. ++..| +++.|.
T Consensus 192 ~~p~dstp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~t-~~~l~-~~~~f~ 252 (264)
T cd08201 192 VLQFFDTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGNVT-MNELA-SPDTFQ 252 (264)
T ss_pred CCCCCCCccccchHHHHHHhcCCCCCceeecCCCCccchhhheecCccHH-HHHhc-ChHHHH
Confidence 8999999999999999999999898876 46666665332222 24454 455554
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=8.4e-49 Score=346.00 Aligned_cols=225 Identities=29% Similarity=0.406 Sum_probs=190.3
Q ss_pred CCccchhhHHHHHHHHHHHHH-HHHcCCcccchhhhheeecCCCccCCCCCCCCCc-cCChhhccCCCCCc--hHHHHHH
Q 026905 3 LPVVDTEYLKEIDKARRDLRA-LIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNG--LKIALDF 78 (231)
Q Consensus 3 ~~~~~~~y~~~~~~~~~~~~~-~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgs-i~~~~e~~~~~N~g--l~~~~~~ 78 (231)
+|++++++..+-+ ++.|++ ++....+++.+|||+||+++|||.+++.||+||+ |+|.+|++|+.|.+ |.+++.+
T Consensus 3 ~p~~~~~~i~~~d--i~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~ 80 (297)
T cd08200 3 IPAVDYELIDDAD--IAALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAV 80 (297)
T ss_pred CCCCCccccCHHH--HHHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHH
Confidence 6888877655322 445554 4455678999999999999999999999999995 99999999999999 9999999
Q ss_pred HHHHHhhCC-------CCcHHHHHHHHhhHHHHhcCC-----CcccCCCCcCCCCCCCC--C---CCCCCCC--------
Q 026905 79 CEEVKAKHP-------KITYADLYQLAGVVAVEVTGG-----PTVDFVPGRKDSKISPK--E---GRLPDAK-------- 133 (231)
Q Consensus 79 i~~~k~~~p-------~vS~ADiialAa~~av~~~Gg-----P~~~v~~GR~D~~~s~~--~---~~lP~p~-------- 133 (231)
+++||+++| .||+||+|+||+.+|||.+|| |.|+|.+||.|++.+.. + .++|.+.
T Consensus 81 Le~ik~~~~~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~ 160 (297)
T cd08200 81 LEGIQKEFNESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKK 160 (297)
T ss_pred HHHHHHHhcccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCccccccccc
Confidence 999999997 799999999999999999999 99999999999987542 1 2345331
Q ss_pred ----CChHHHHHHHHHcCCCcccceeecccc-ccccCCCCCCCCCCCCCCCCCccChHHHHHHhhcc--c----------
Q 026905 134 ----RGAPHLRDIFYRMGLSDKDIVALSGGH-TLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGE--S---------- 196 (231)
Q Consensus 134 ----~~~~~l~~~F~~~Gl~~~e~VaL~GaH-tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~--~---------- 196 (231)
...+.|++.|.++|||++|||||+||| ++|..|. ++ +.|+|+.+|.+|||+||++|+..+ |
T Consensus 161 ~~~~~~~~~Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~-~s-~~G~wT~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~ 238 (297)
T cd08200 161 GYRVPPEEMLVDKAQLLTLTAPEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMSTEWKPADEDDGLF 238 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCChHHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcccceeeecCCCCCce
Confidence 234679999999999999999999997 7999886 44 469999999999999999999632 1
Q ss_pred ------CCcc---cccchhhcccChhhHHHHHHHhhC--hhhhhcC
Q 026905 197 ------EGLL---QLPTDKALLEDPEFRRYVELYAKV--NALILTK 231 (231)
Q Consensus 197 ------~gl~---~l~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~ 231 (231)
.|.+ ++++|.+|.+|+++|++|+.||+| ++.||++
T Consensus 239 ~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~D 284 (297)
T cd08200 239 EGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKD 284 (297)
T ss_pred eeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHH
Confidence 1222 368899999999999999999998 8999863
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3.3e-43 Score=340.05 Aligned_cols=224 Identities=28% Similarity=0.392 Sum_probs=189.5
Q ss_pred CCccchhhHHHHHHHHHHHHH-HHHcCCcccchhhhheeecCCCccCCCCCCCCCc-cCChhhccCCCC--CchHHHHHH
Q 026905 3 LPVVDTEYLKEIDKARRDLRA-LIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSN--NGLKIALDF 78 (231)
Q Consensus 3 ~~~~~~~y~~~~~~~~~~~~~-~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgs-i~~~~e~~~~~N--~gl~~~~~~ 78 (231)
+|++++++. ++.++.|++ ++.+...++.+|||+||+++|||.+++.||+||+ |||.+|++|+.| .+|.+++.+
T Consensus 422 ~p~~~~~~v---~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~ 498 (716)
T TIGR00198 422 LPPVDYTLS---EGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAV 498 (716)
T ss_pred CCCCCchhH---HHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHH
Confidence 688876655 555666764 5666778999999999999999999999999995 999999999999 899999999
Q ss_pred HHHHHhhCC--CCcHHHHHHHHhhHHHHhc---CCC--cccCCCCcCCCCCCC--CCCCCCC---------------CCC
Q 026905 79 CEEVKAKHP--KITYADLYQLAGVVAVEVT---GGP--TVDFVPGRKDSKISP--KEGRLPD---------------AKR 134 (231)
Q Consensus 79 i~~~k~~~p--~vS~ADiialAa~~av~~~---GgP--~~~v~~GR~D~~~s~--~~~~lP~---------------p~~ 134 (231)
+++||+++| .||+||+|+||+.+|||.+ ||| .|+|.+||.|++... +++..|. ...
T Consensus 499 Le~Ik~~f~~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 499 LEKIQAEFAKGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHHHHHcCCCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCC
Confidence 999999999 8999999999999999999 897 589999999998754 2222221 112
Q ss_pred ChHHHHHHHHHcCCCcccceeeccc-cccccCCCCCCCCCCCCCCCCCccChHHHHHHhhcc--c---------------
Q 026905 135 GAPHLRDIFYRMGLSDKDIVALSGG-HTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGE--S--------------- 196 (231)
Q Consensus 135 ~~~~l~~~F~~~Gl~~~e~VaL~Ga-HtiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~--~--------------- 196 (231)
....|++.|..+|||++|||||+|| |++|.+|.. + +.|+|+.+|.+|||+||++|+..+ |
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~-s-~~G~~T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr 656 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGG-S-KHGVFTDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDR 656 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCC-C-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCceeeeecC
Confidence 3456889999999999999999998 599999974 3 469999999999999999999742 2
Q ss_pred -CCcccc---cchhhcccChhhHHHHHHHhhCh--hhhhcC
Q 026905 197 -EGLLQL---PTDKALLEDPEFRRYVELYAKVN--ALILTK 231 (231)
Q Consensus 197 -~gl~~l---~SD~~L~~d~~t~~~V~~yA~~~--~~F~~~ 231 (231)
.|.+++ ++|.+|.+|+++|++|+.||+|+ +.||++
T Consensus 657 ~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~D 697 (716)
T TIGR00198 657 QTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKD 697 (716)
T ss_pred CCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHH
Confidence 144444 78999999999999999999997 889863
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.2e-42 Score=332.83 Aligned_cols=225 Identities=30% Similarity=0.425 Sum_probs=190.5
Q ss_pred CCccchhhHHHHHHHHHHHHH-HHHcCCcccchhhhheeecCCCccCCCCCCCCCc-cCChhhccCCCCC--chHHHHHH
Q 026905 3 LPVVDTEYLKEIDKARRDLRA-LIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNN--GLKIALDF 78 (231)
Q Consensus 3 ~~~~~~~y~~~~~~~~~~~~~-~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgs-i~~~~e~~~~~N~--gl~~~~~~ 78 (231)
+|+|+++++..-+ +..||+ ++...-.++.+||++||+++|||.+++.||+||+ |||++|++|+.|. +|.+++.+
T Consensus 428 ~p~~~~~~~~~~d--i~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~ 505 (726)
T PRK15061 428 VPAVDHELIDDAD--IAALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAV 505 (726)
T ss_pred CCCCCcccCCHHH--HHHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHH
Confidence 6888888766544 556665 5556667999999999999999999999999995 9999999999999 99999999
Q ss_pred HHHHHhhC-------CCCcHHHHHHHHhhHHHHhc---CC--CcccCCCCcCCCCCCCC--C---CCCCCCC--------
Q 026905 79 CEEVKAKH-------PKITYADLYQLAGVVAVEVT---GG--PTVDFVPGRKDSKISPK--E---GRLPDAK-------- 133 (231)
Q Consensus 79 i~~~k~~~-------p~vS~ADiialAa~~av~~~---Gg--P~~~v~~GR~D~~~s~~--~---~~lP~p~-------- 133 (231)
+++||+++ |.||+||+|+||+.+|||.+ || |.|+|.+||.|++...+ + .++|...
T Consensus 506 LE~Ik~~f~~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~ 585 (726)
T PRK15061 506 LEGIQAEFNAAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKK 585 (726)
T ss_pred HHHHHHHHhhccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccc
Confidence 99999998 68999999999999999999 57 99999999999987542 2 2456432
Q ss_pred ----CChHHHHHHHHHcCCCcccceeecccc-ccccCCCCCCCCCCCCCCCCCccChHHHHHHhhcc--c----------
Q 026905 134 ----RGAPHLRDIFYRMGLSDKDIVALSGGH-TLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGE--S---------- 196 (231)
Q Consensus 134 ----~~~~~l~~~F~~~Gl~~~e~VaL~GaH-tiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~--~---------- 196 (231)
.....|++.|.++|||++|||||+||| ++|..|. ++ +.|+|+.+|.+|||.||++|+..+ |
T Consensus 586 ~~~~~~e~~L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~-~S-~~G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~y 663 (726)
T PRK15061 586 GYSVSPEELLVDKAQLLTLTAPEMTVLVGGLRVLGANYG-GS-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVY 663 (726)
T ss_pred cCCCCHHHHHHHHHHhCCCChHHHhheecchhhcccCCC-CC-CCCCCcCCCCccccHHHHHHhcCCceeeecCCCCCce
Confidence 123679999999999999999999996 7888885 35 469999999999999999999632 1
Q ss_pred ------CCccc---ccchhhcccChhhHHHHHHHhhC--hhhhhcC
Q 026905 197 ------EGLLQ---LPTDKALLEDPEFRRYVELYAKV--NALILTK 231 (231)
Q Consensus 197 ------~gl~~---l~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~ 231 (231)
.|.++ +++|.+|.+|+++|++|+.||+| ++.||++
T Consensus 664 e~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~D 709 (726)
T PRK15061 664 EGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRD 709 (726)
T ss_pred eeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHH
Confidence 13232 47899999999999999999998 9999863
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-37 Score=284.91 Aligned_cols=225 Identities=36% Similarity=0.572 Sum_probs=198.1
Q ss_pred cchhhHHHH-----HHHHHHHHHHHHcC---------CcccchhhhheeecCCCccCCCCCCCCC-ccCChhhccCCCCC
Q 026905 6 VDTEYLKEI-----DKARRDLRALIAYK---------NCAPIMLRLAWHDAGTYDVNTKTGGPNG-SIRNEEEYSHGSNN 70 (231)
Q Consensus 6 ~~~~y~~~~-----~~~~~~~~~~~~~~---------~~a~~~lRl~FHDc~t~d~s~~~gG~dg-si~~~~e~~~~~N~ 70 (231)
.+.+|-..+ ++++++|+++..+. .+.|.+|||+||.++||+..++.||+.+ ..||.++.+||.|.
T Consensus 56 ~~fdYaeefk~lD~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~ 135 (730)
T COG0376 56 EDFDYAEEFKSLDLAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNA 135 (730)
T ss_pred cchHHHHHhhhccHHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCccc
Confidence 456777664 77899999988763 4789999999999999999999999875 89999999999999
Q ss_pred chHHHHHHHHHHHhhCC-CCcHHHHHHHHhhHHHHhcCCCcccCCCCcCCCCCCCC------------------------
Q 026905 71 GLKIALDFCEEVKAKHP-KITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPK------------------------ 125 (231)
Q Consensus 71 gl~~~~~~i~~~k~~~p-~vS~ADiialAa~~av~~~GgP~~~v~~GR~D~~~s~~------------------------ 125 (231)
+|++++.++++||++|+ .||+||+|.|++.+|++.+|++.+.|..||.|-..+..
T Consensus 136 nLDKarRLLWPIKkKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~ 215 (730)
T COG0376 136 NLDKARRLLWPIKKKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLEN 215 (730)
T ss_pred chHHHHHHhhhHhHhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccC
Confidence 99999999999999999 99999999999999999999999999999999876532
Q ss_pred --------------C--CCCCCCCCChHHHHHHHHHcCCCcccceeecc-ccccccCCCCC-------------------
Q 026905 126 --------------E--GRLPDAKRGAPHLRDIFYRMGLSDKDIVALSG-GHTLGRAHPER------------------- 169 (231)
Q Consensus 126 --------------~--~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~G-aHtiG~~~~~~------------------- 169 (231)
+ +..|+|-....+++..|++|+++.+|.|||++ |||+|++|...
T Consensus 216 PlaavqMGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGl 295 (730)
T COG0376 216 PLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGL 295 (730)
T ss_pred chhhheeeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhcc
Confidence 1 23678888889999999999999999999996 89999999742
Q ss_pred ----------------CCCCCCCCCCCCccChHHHHHHhhccc--------------C-----------------Ccccc
Q 026905 170 ----------------SGFDGPWTREPLKFDNSYFVELLNGES--------------E-----------------GLLQL 202 (231)
Q Consensus 170 ----------------~~~~g~~~~tp~~fDN~Yy~~ll~~~~--------------~-----------------gl~~l 202 (231)
+|.+++|+.+|++|||+||.+|+..+| + .+.||
T Consensus 296 GW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Ml 375 (730)
T COG0376 296 GWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMML 375 (730)
T ss_pred ccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceee
Confidence 133567999999999999999987653 1 45789
Q ss_pred cchhhcccChhhHHHHHHHhhChhhhhc
Q 026905 203 PTDKALLEDPEFRRYVELYAKVNALILT 230 (231)
Q Consensus 203 ~SD~~L~~d~~t~~~V~~yA~~~~~F~~ 230 (231)
++|.+|.-||+++.+.++|..|++.|.+
T Consensus 376 ttDlaLr~DP~Y~kIs~rf~e~pd~F~~ 403 (730)
T COG0376 376 TTDLALRFDPEYEKISRRFLEDPDEFAD 403 (730)
T ss_pred ccchhhhcChHHHHHHHHHHhCHHHHHH
Confidence 9999999999999999999999998864
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.84 E-value=8.5e-21 Score=177.14 Aligned_cols=223 Identities=29% Similarity=0.410 Sum_probs=173.3
Q ss_pred CCccchhhHHHHHHHHHHHHH-HHHcCCcccchhhhheeecCCCccCCCCCCCCC-ccCChhhccCCCCC--chHHHHHH
Q 026905 3 LPVVDTEYLKEIDKARRDLRA-LIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNG-SIRNEEEYSHGSNN--GLKIALDF 78 (231)
Q Consensus 3 ~~~~~~~y~~~~~~~~~~~~~-~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dg-si~~~~e~~~~~N~--gl~~~~~~ 78 (231)
+|+|+++..+ ..++.|++ |+.+.-....++-.+|..+.||+.|++.||+|| .|++.+.++|+.|. .|.+++.+
T Consensus 439 iP~vd~~l~d---~di~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~ 515 (730)
T COG0376 439 LPAVDYELVD---ADIAALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAV 515 (730)
T ss_pred CCccccccch---HHHHHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHH
Confidence 7888888766 44556664 667777889999999999999999999999998 89999999999996 57789999
Q ss_pred HHHHHhhCC-CCcHHHHHHHHhhHHHHhc---CCC--cccCCCCcCCCCCCCCC-----CCCC------------CCCCC
Q 026905 79 CEEVKAKHP-KITYADLYQLAGVVAVEVT---GGP--TVDFVPGRKDSKISPKE-----GRLP------------DAKRG 135 (231)
Q Consensus 79 i~~~k~~~p-~vS~ADiialAa~~av~~~---GgP--~~~v~~GR~D~~~s~~~-----~~lP------------~p~~~ 135 (231)
++.|.+.+. .||.||+|+|++..|||.+ +|- .++|.+||.|++..... -.-| .....
T Consensus 516 le~iq~~fnkkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~p 595 (730)
T COG0376 516 LEKIQKEFNKKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTP 595 (730)
T ss_pred HHHHHHHhcCccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCH
Confidence 999999886 7999999999999999986 443 46889999999754311 0011 11122
Q ss_pred hHHHHHHHHHcCCCcccceeeccc-cccccCCCCCCCCCCCCCCCCCccChHHHHHHhhccc------------------
Q 026905 136 APHLRDIFYRMGLSDKDIVALSGG-HTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGES------------------ 196 (231)
Q Consensus 136 ~~~l~~~F~~~Gl~~~e~VaL~Ga-HtiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~~------------------ 196 (231)
..-|+++-+-.+||..||++|+|| .-+|..+.. + -.|.++..|.++.|.||.||+....
T Consensus 596 e~~LvDkAqlL~LtapemtVLiGGlRvLg~n~g~-s-~~GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~Drk 673 (730)
T COG0376 596 EELLVDKAQLLTLTAPEMTVLIGGLRVLGANYGG-S-KHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRK 673 (730)
T ss_pred HHHHHHHHHHhccCCccceEEEcceEeeccCCCC-C-ccceeccCcccccchhhhhhhhccceeeeccccccceeccccc
Confidence 334778888899999999999997 556655431 1 2477889999999999999997531
Q ss_pred CCccc---ccchhhcccChhhHHHHHHHhhC--hhhhhc
Q 026905 197 EGLLQ---LPTDKALLEDPEFRRYVELYAKV--NALILT 230 (231)
Q Consensus 197 ~gl~~---l~SD~~L~~d~~t~~~V~~yA~~--~~~F~~ 230 (231)
.|.++ -..|..+-++++.|++.+-||++ ++.|-+
T Consensus 674 tG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~ 712 (730)
T COG0376 674 TGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVK 712 (730)
T ss_pred cCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHH
Confidence 12211 14788888999999999999885 555643
No 19
>PF09533 DUF2380: Predicted lipoprotein of unknown function (DUF2380); InterPro: IPR011755 This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N terminus; the others are predicted lipoproteins. The function is unknown.
Probab=49.60 E-value=23 Score=29.83 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=25.5
Q ss_pred hHHHHHHHHHcCCCcccceeeccccccccCCC
Q 026905 136 APHLRDIFYRMGLSDKDIVALSGGHTLGRAHP 167 (231)
Q Consensus 136 ~~~l~~~F~~~Gl~~~e~VaL~GaHtiG~~~~ 167 (231)
..+|...|.++|+++-|.+.++..|.-=+.|.
T Consensus 107 a~~la~wF~~~Gi~IHd~ti~Ip~~vH~rIH~ 138 (188)
T PF09533_consen 107 AEELAEWFERRGIDIHDYTIPIPRDVHRRIHG 138 (188)
T ss_pred cHHHHHHHHHcCCChhheeEecCHHHHHHhhC
Confidence 35789999999999999999998755444443
No 20
>PF15656 Tox-HDC: Toxin with a H, D/N and C signature
Probab=35.20 E-value=43 Score=26.36 Aligned_cols=70 Identities=23% Similarity=0.179 Sum_probs=36.7
Q ss_pred HcCCC--cccceeeccccccccCCCCCCCCCCCCCCCCCccChHHHHHHhhccc--CCcccccchhhcccChhhHH
Q 026905 145 RMGLS--DKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGES--EGLLQLPTDKALLEDPEFRR 216 (231)
Q Consensus 145 ~~Gl~--~~e~VaL~GaHtiG~~~~~~~~~~g~~~~tp~~fDN~Yy~~ll~~~~--~gl~~l~SD~~L~~d~~t~~ 216 (231)
+++++ ..++++|||.| |..+.++.--.+.....|...++.||.+=+..-. .|.-.-.-|.+.++..+...
T Consensus 22 ar~~s~~~~~I~IlSGtH--G~~~G~nw~~~~~~~R~p~l~e~~f~~eD~~~~~~~~~~~v~v~D~~~~~~~el~~ 95 (119)
T PF15656_consen 22 ARRPSGDNGDIHILSGTH--GYCSGQNWLSESNRLRRPGLKEKAFYKEDLRDYKGNKGRKVHVVDVATASMEELNN 95 (119)
T ss_pred HhCcCCCCCCEEEEeCCC--CCccccchhhccccccCchhhhhhHHHHHHHHhccccCCceeeeehhhcCHHHHHH
Confidence 34555 89999999998 3322211000011134688899999977664321 01111235655555444443
No 21
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=31.03 E-value=49 Score=24.44 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCcccchhhhheeecCCCccCCCCCCCCC
Q 026905 15 DKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNG 56 (231)
Q Consensus 15 ~~~~~~~~~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dg 56 (231)
++|.+.|++++......+..||+.+- .|||.|
T Consensus 8 ~~A~~~i~~ll~~~~~~~~~LRi~v~----------~gGCsG 39 (92)
T TIGR01911 8 DDAYEEFKDFLKENDIDNDVIRIHFA----------GMGCMG 39 (92)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEEe----------CCCccC
Confidence 56777888877654444455998774 467877
No 22
>PRK12346 transaldolase A; Provisional
Probab=29.67 E-value=29 Score=31.78 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhhCCCCcHHHHHHHH--hhHHHHhcCCCcccCCCCcCCCCCCCC---CCCCCCCCC---ChHHHHHHHHH
Q 026905 74 IALDFCEEVKAKHPKITYADLYQLA--GVVAVEVTGGPTVDFVPGRKDSKISPK---EGRLPDAKR---GAPHLRDIFYR 145 (231)
Q Consensus 74 ~~~~~i~~~k~~~p~vS~ADiialA--a~~av~~~GgP~~~v~~GR~D~~~s~~---~~~lP~p~~---~~~~l~~~F~~ 145 (231)
.|+..+..++++ .|+|-=.+.+. =..+...+|-..+..++||.|.+.-.. ...-+.... .+.++.+.|++
T Consensus 137 eGi~A~~~L~~~--GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~ 214 (316)
T PRK12346 137 EGIRAAEELEKE--GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQ 214 (316)
T ss_pred HHHHHHHHHHHC--CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHHHH
Confidence 355555555543 22222222222 223334458888999999998753221 111112222 35667778888
Q ss_pred cCCC----------cccceeecccccc
Q 026905 146 MGLS----------DKDIVALSGGHTL 162 (231)
Q Consensus 146 ~Gl~----------~~e~VaL~GaHti 162 (231)
.|+. ..|+.+|.|+|.+
T Consensus 215 ~~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 215 HRYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred cCCCcEEEecccCCHHHHHHHhCCCEE
Confidence 8865 4555666677644
No 23
>PF09027 GTPase_binding: GTPase binding; InterPro: IPR015116 The GTPase binding domain binds to the G protein Cdc42, inhibiting both its intrinsic and stimulated GTPase activity. The domain is largely unstructured in the absence of Cdc42 []. ; PDB: 1CF4_B.
Probab=29.44 E-value=23 Score=24.98 Aligned_cols=12 Identities=33% Similarity=0.664 Sum_probs=4.6
Q ss_pred CCCCccChHHHH
Q 026905 178 REPLKFDNSYFV 189 (231)
Q Consensus 178 ~tp~~fDN~Yy~ 189 (231)
.+|..|||.|+.
T Consensus 31 g~~~~idn~yl~ 42 (66)
T PF09027_consen 31 GSPSEIDNNYLN 42 (66)
T ss_dssp -SS----TTT--
T ss_pred CChhhhhhhhhc
Confidence 588999999997
No 24
>PTZ00411 transaldolase-like protein; Provisional
Probab=28.05 E-value=34 Score=31.51 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=36.0
Q ss_pred HhcCCCcccCCCCcCCCCCCCCC---CCCCCCCC---ChHHHHHHHHHcCCC----------cccceeecccccc
Q 026905 104 EVTGGPTVDFVPGRKDSKISPKE---GRLPDAKR---GAPHLRDIFYRMGLS----------DKDIVALSGGHTL 162 (231)
Q Consensus 104 ~~~GgP~~~v~~GR~D~~~s~~~---~~lP~p~~---~~~~l~~~F~~~Gl~----------~~e~VaL~GaHti 162 (231)
..+|-..+..++||.+.+.-.+. ...+.... .+.++.+.|++.|+. ..|+..|.|+|.+
T Consensus 178 aeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 178 AQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred HHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 34587889999999976532211 11122223 355677778888875 4556667788754
No 25
>PRK13859 type IV secretion system lipoprotein VirB7; Provisional
Probab=27.64 E-value=35 Score=22.88 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=21.6
Q ss_pred HHHHHhh---HHHHhcCCCcccCCCCcCCCCCCC
Q 026905 94 LYQLAGV---VAVEVTGGPTVDFVPGRKDSKISP 124 (231)
Q Consensus 94 iialAa~---~av~~~GgP~~~v~~GR~D~~~s~ 124 (231)
+++||+. +-+..|.||.+++-.||--..-|.
T Consensus 9 ~l~La~CqT~D~lAtckGpiFpLNVgrWqptpsD 42 (55)
T PRK13859 9 ALALAGCQTNDTLASCKGPIFPLNVGRWQPTPSD 42 (55)
T ss_pred HHHHHhccccCccccccCCccccccccccCChhh
Confidence 4555544 455678999999999997654443
No 26
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=25.58 E-value=1.9e+02 Score=20.05 Aligned_cols=35 Identities=23% Similarity=0.126 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhC----C-CCcHHHHHHHHhhHHHHhcC
Q 026905 73 KIALDFCEEVKAKH----P-KITYADLYQLAGVVAVEVTG 107 (231)
Q Consensus 73 ~~~~~~i~~~k~~~----p-~vS~ADiialAa~~av~~~G 107 (231)
.+.++.++..-... . .+|.||+..+....-+...+
T Consensus 34 ~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~ 73 (95)
T PF00043_consen 34 PRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLG 73 (95)
T ss_dssp HHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhC
Confidence 34566665544432 3 79999999998877666554
No 27
>KOG0693 consensus Myo-inositol-1-phosphate synthase [Lipid transport and metabolism]
Probab=21.38 E-value=2.1e+02 Score=27.05 Aligned_cols=90 Identities=19% Similarity=0.345 Sum_probs=48.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCcccchhhhheeecCCCccCCCCCCCCCccCChhhccCCCCCchH-HHHHHHHHHHh
Q 026905 6 VDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLK-IALDFCEEVKA 84 (231)
Q Consensus 6 ~~~~y~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHDc~t~d~s~~~gG~dgsi~~~~e~~~~~N~gl~-~~~~~i~~~k~ 84 (231)
+..+-+.+++.+|+||+++.++..+ -..|=||=. .+|+-...-.|+. .+-++++.++.
T Consensus 198 I~g~~keqle~Ir~Dir~Fke~~~l-dkViVLWTA--------------------NTERy~~V~~GlNdT~enl~~si~~ 256 (512)
T KOG0693|consen 198 IKGTKKEQLEQIRKDIREFKEENKL-DKVIVLWTA--------------------NTERYSNVIPGLNDTAENLLESIEK 256 (512)
T ss_pred ccCchHHHHHHHHHHHHHHHHhcCC-ceEEEEEec--------------------CcceeeccccccchHHHHHHHHHhc
Confidence 4455567789999999998765321 111212110 1233333333443 34566777776
Q ss_pred hCCCCcHHHHHHHHhh-HHHHhc-CCCcccCCCC
Q 026905 85 KHPKITYADLYQLAGV-VAVEVT-GGPTVDFVPG 116 (231)
Q Consensus 85 ~~p~vS~ADiialAa~-~av~~~-GgP~~~v~~G 116 (231)
....||-+-|.|+|.. +.+... |.|.=.+-+|
T Consensus 257 ~~~EisPStifA~AsilEg~~yiNGSPQNTfVPG 290 (512)
T KOG0693|consen 257 DESEISPSTIFAIASILEGCPYINGSPQNTFVPG 290 (512)
T ss_pred CccccChHHHHHHHHHHcCCCcccCCCccccchh
Confidence 5457888888888765 222222 5565444333
Done!