Query 026907
Match_columns 231
No_of_seqs 171 out of 695
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 14:22:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026907.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026907hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 2.2E-70 4.8E-75 511.5 17.9 174 57-230 47-224 (387)
2 PF14416 PMR5N: PMR5 N termina 99.9 8.7E-29 1.9E-33 173.9 4.6 53 60-112 1-55 (55)
3 PF13839 PC-Esterase: GDSL/SGN 99.9 3E-24 6.5E-29 185.4 8.8 104 113-226 1-115 (263)
4 cd01842 SGNH_hydrolase_like_5 96.4 0.0019 4.2E-08 55.8 2.5 22 130-151 2-23 (183)
5 cd01829 SGNH_hydrolase_peri2 S 79.9 1.6 3.4E-05 36.0 2.7 21 129-149 1-21 (200)
6 cd01834 SGNH_hydrolase_like_2 79.2 1 2.2E-05 36.4 1.3 15 127-141 1-15 (191)
7 cd01841 NnaC_like NnaC (CMP-Ne 77.2 1.2 2.6E-05 36.0 1.2 13 128-140 1-13 (174)
8 COG2845 Uncharacterized protei 76.5 3.1 6.8E-05 39.3 3.8 30 122-151 111-140 (354)
9 PF00185 OTCace: Aspartate/orn 66.2 4 8.6E-05 33.9 1.9 25 126-151 1-25 (158)
10 cd01825 SGNH_hydrolase_peri1 S 64.5 3 6.4E-05 33.8 0.8 16 129-144 1-17 (189)
11 cd01844 SGNH_hydrolase_like_6 62.4 3.8 8.2E-05 33.5 1.1 13 129-141 1-13 (177)
12 cd01838 Isoamyl_acetate_hydrol 60.6 4 8.8E-05 33.0 0.9 13 129-141 1-13 (199)
13 cd01835 SGNH_hydrolase_like_3 60.2 4.1 8.8E-05 33.5 0.9 13 128-140 2-14 (193)
14 cd01832 SGNH_hydrolase_like_1 59.7 4.1 8.9E-05 33.0 0.8 12 129-140 1-12 (185)
15 cd01820 PAF_acetylesterase_lik 57.8 4 8.7E-05 34.5 0.5 16 126-141 31-46 (214)
16 PF12026 DUF3513: Domain of un 54.7 1 2.2E-05 39.9 -3.8 17 125-141 132-148 (210)
17 cd01827 sialate_O-acetylestera 54.3 5.8 0.00013 32.3 0.9 13 129-141 2-14 (188)
18 cd01831 Endoglucanase_E_like E 53.9 6.1 0.00013 32.0 0.9 14 129-142 1-14 (169)
19 cd01822 Lysophospholipase_L1_l 53.6 6.1 0.00013 31.6 0.9 12 129-140 2-13 (177)
20 PRK10528 multifunctional acyl- 53.0 6.7 0.00015 32.8 1.1 15 127-141 10-24 (191)
21 cd01833 XynB_like SGNH_hydrola 51.8 5.7 0.00012 31.4 0.4 12 129-140 2-13 (157)
22 PRK14805 ornithine carbamoyltr 49.5 10 0.00022 35.0 1.7 26 124-151 144-169 (302)
23 cd00229 SGNH_hydrolase SGNH_hy 46.7 7.1 0.00015 29.7 0.2 13 130-142 1-13 (187)
24 cd01839 SGNH_arylesterase_like 46.3 9.4 0.0002 31.8 0.9 12 129-140 1-12 (208)
25 cd01836 FeeA_FeeB_like SGNH_hy 44.7 10 0.00022 31.0 0.8 14 128-141 3-16 (191)
26 cd04501 SGNH_hydrolase_like_4 44.7 10 0.00022 30.7 0.9 12 128-139 1-12 (183)
27 cd01830 XynE_like SGNH_hydrola 43.8 11 0.00024 31.5 0.9 12 129-140 1-12 (204)
28 PF09949 DUF2183: Uncharacteri 43.3 18 0.0004 28.1 2.1 25 115-139 52-76 (100)
29 PRK04284 ornithine carbamoyltr 42.2 16 0.00036 34.1 1.9 27 124-151 152-178 (332)
30 cd01828 sialate_O-acetylestera 41.3 13 0.00027 29.9 0.9 13 130-142 2-14 (169)
31 cd01821 Rhamnogalacturan_acety 37.5 15 0.00032 30.4 0.8 14 129-142 2-15 (198)
32 PLN02527 aspartate carbamoyltr 37.1 23 0.00049 32.8 2.0 27 124-150 148-174 (306)
33 cd04502 SGNH_hydrolase_like_7 36.7 16 0.00036 29.3 0.9 12 130-141 2-13 (171)
34 PF00702 Hydrolase: haloacid d 36.6 26 0.00056 28.6 2.1 20 119-138 185-206 (215)
35 PRK00856 pyrB aspartate carbam 35.5 24 0.00051 32.7 1.8 28 124-151 153-180 (305)
36 PRK02102 ornithine carbamoyltr 35.2 26 0.00057 32.9 2.1 27 124-151 152-178 (331)
37 PLN02342 ornithine carbamoyltr 34.7 27 0.0006 33.0 2.2 27 123-151 190-216 (348)
38 cd04506 SGNH_hydrolase_YpmR_li 34.6 18 0.00039 29.9 0.8 12 129-140 1-12 (204)
39 PRK03515 ornithine carbamoyltr 33.7 26 0.00056 32.9 1.8 26 125-151 154-179 (336)
40 TIGR01489 DKMTPPase-SF 2,3-dik 33.6 42 0.00092 26.9 2.9 13 127-139 162-174 (188)
41 PF13472 Lipase_GDSL_2: GDSL-l 33.4 20 0.00044 27.6 0.9 12 131-142 1-12 (179)
42 PRK01713 ornithine carbamoyltr 32.7 29 0.00063 32.5 2.0 26 125-151 154-179 (334)
43 cd01840 SGNH_hydrolase_yrhL_li 32.6 21 0.00046 28.5 0.9 16 130-145 2-17 (150)
44 PRK08192 aspartate carbamoyltr 31.6 30 0.00065 32.5 1.9 26 125-150 157-182 (338)
45 COG0078 ArgF Ornithine carbamo 30.7 35 0.00075 32.1 2.1 22 125-148 151-172 (310)
46 PF01861 DUF43: Protein of unk 29.7 24 0.00053 32.0 0.9 12 125-136 43-54 (243)
47 PRK11891 aspartate carbamoyltr 28.5 41 0.00088 32.9 2.2 26 125-150 239-264 (429)
48 PRK12562 ornithine carbamoyltr 28.4 38 0.00083 31.8 2.0 26 125-151 154-179 (334)
49 COG0034 PurF Glutamine phospho 28.2 33 0.00072 33.9 1.6 32 121-152 342-374 (470)
50 TIGR00670 asp_carb_tr aspartat 27.4 39 0.00084 31.2 1.8 29 123-151 146-174 (301)
51 PF00657 Lipase_GDSL: GDSL-lik 24.8 38 0.00082 27.6 1.1 11 130-140 1-11 (234)
52 PRK14804 ornithine carbamoyltr 24.7 48 0.001 30.7 1.9 26 124-151 150-175 (311)
53 PRK00779 ornithine carbamoyltr 24.5 42 0.00091 30.9 1.5 42 108-151 133-174 (304)
54 COG0540 PyrB Aspartate carbamo 24.2 21 0.00044 33.6 -0.6 44 108-151 139-182 (316)
55 TIGR00658 orni_carb_tr ornithi 23.3 49 0.0011 30.4 1.7 25 125-151 146-170 (304)
56 PF14647 FAM91_N: FAM91 N-term 22.2 84 0.0018 29.5 3.0 31 112-152 108-138 (308)
57 PF13242 Hydrolase_like: HAD-h 21.9 68 0.0015 22.6 1.9 19 126-144 20-38 (75)
58 cd01823 SEST_like SEST_like. A 21.1 49 0.0011 28.4 1.2 13 128-140 1-13 (259)
59 PF09084 NMT1: NMT1/THI5 like; 21.0 83 0.0018 25.9 2.5 25 123-147 89-113 (216)
60 PF03193 DUF258: Protein of un 21.0 81 0.0017 26.6 2.4 35 115-151 23-57 (161)
61 PRK02255 putrescine carbamoylt 21.0 71 0.0015 30.0 2.3 24 125-150 152-175 (338)
62 PRK10113 cell division modulat 20.2 48 0.001 24.7 0.8 17 124-140 38-56 (80)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=2.2e-70 Score=511.53 Aligned_cols=174 Identities=54% Similarity=1.092 Sum_probs=161.3
Q ss_pred CCCCCCCcCccCceeecCCCCCC--CCCC-CCCCCcccccCCCCCCccccceeecCCCCCCCCCHHHHHHHhcCCceEEe
Q 026907 57 SLGGGKCNIFQGKWVYDASYPLY--SHCP-FVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFV 133 (231)
Q Consensus 57 ~~~~~~Cd~~~G~WV~D~~~PlY--~tCp-~i~~~~~C~~nGRpD~~y~~WrWqP~gC~Lprfd~~~fL~~lrgkri~FV 133 (231)
..+.++||+|+|+||+|+++|+| ++|| ||++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 34567899999999999999999 7999 99999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHhhcccCCCceeeEeecCeeEEEEEcccceEEEEEEecceeccccCCCCceEEeccCCC-CCCCCCC
Q 026907 134 GDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKG-GNAWRGM 212 (231)
Q Consensus 134 GDSl~Rnq~~SL~ClL~~~~p~~~~~~~~~~~~~~~~f~~yn~Tv~f~WsPfLv~~~~~~~~~~L~lD~~~~-~~~w~~~ 212 (231)
||||+|||||||+|||++++|...+...+.++..+|+|++||+||+||||||||+.+.....++|+||+++. +++|+++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence 999999999999999999998776666667788999999999999999999999988776677999999974 5899999
Q ss_pred cEEEEcccccccCCCCCC
Q 026907 213 DMLIFNTWHWWTHTGRSQ 230 (231)
Q Consensus 213 DvlVfntGhWw~~~~~~~ 230 (231)
|||||||||||.|++..+
T Consensus 207 DvlVfntghWw~~~~~~~ 224 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQ 224 (387)
T ss_pred CEEEEeCccccCCCCeeE
Confidence 999999999999986543
No 2
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.95 E-value=8.7e-29 Score=173.95 Aligned_cols=53 Identities=60% Similarity=1.365 Sum_probs=51.1
Q ss_pred CCCCcCccCceeecCCCCCC--CCCCCCCCCcccccCCCCCCccccceeecCCCC
Q 026907 60 GGKCNIFQGKWVYDASYPLY--SHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCS 112 (231)
Q Consensus 60 ~~~Cd~~~G~WV~D~~~PlY--~tCp~i~~~~~C~~nGRpD~~y~~WrWqP~gC~ 112 (231)
+++||+|+|+||+|+++||| ++||||+++|||++|||||++|++|||||++|+
T Consensus 1 e~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 1 EKRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CCccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 35899999999999999999 999999999999999999999999999999996
No 3
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=99.90 E-value=3e-24 Score=185.36 Aligned_cols=104 Identities=29% Similarity=0.578 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhcccCC-----CceeeEeecCeeEEEEEcccceEEEEEEeccee
Q 026907 113 IPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAP-----KTKYSVVRTAVLSSITFQEFGLQILLYRTTYLV 187 (231)
Q Consensus 113 Lprfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~~~~p-----~~~~~~~~~~~~~~~~f~~yn~Tv~f~WsPfLv 187 (231)
|++||+.++|++||||+|+|||||++||||+||+|+|.+..+ +........+....+.++++|+||+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998776 222323334567788999999999999999999
Q ss_pred ccccCCCCceEEeccCC--CCCCCC----CCcEEEEcccccccCC
Q 026907 188 DLVREPAGTVLRLDSIK--GGNAWR----GMDMLIFNTWHWWTHT 226 (231)
Q Consensus 188 ~~~~~~~~~~L~lD~~~--~~~~w~----~~DvlVfntGhWw~~~ 226 (231)
+. +|.++ ....|. .+||||+|+|+||.+.
T Consensus 81 ~~----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~ 115 (263)
T PF13839_consen 81 DQ----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRR 115 (263)
T ss_pred cc----------ccccchhhhccccccccCCCEEEEEcchhhhhc
Confidence 74 33332 124444 8999999999999975
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.45 E-value=0.0019 Score=55.75 Aligned_cols=22 Identities=18% Similarity=0.540 Sum_probs=20.7
Q ss_pred eEEecchhhHHHHHHHHHhhcc
Q 026907 130 IMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 130 i~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|+|||+-|-+|--|+|||..
T Consensus 2 v~~lgds~~ravykdlv~l~q~ 23 (183)
T cd01842 2 VVILGDSIQRAVYKDLVLLLQK 23 (183)
T ss_pred EEEEccHHHHHHHHHHHHHhcC
Confidence 6899999999999999999984
No 5
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=79.94 E-value=1.6 Score=36.05 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=17.5
Q ss_pred ceEEecchhhHHHHHHHHHhh
Q 026907 129 KIMFVGDSLSLNQWQSLACMI 149 (231)
Q Consensus 129 ri~FVGDSl~Rnq~~SL~ClL 149 (231)
||+|+|||++...+-++...+
T Consensus 1 ril~iGDS~~~g~~~~l~~~~ 21 (200)
T cd01829 1 RVLVIGDSLAQGLAPGLLRAL 21 (200)
T ss_pred CEEEEechHHHHHHHHHHHHh
Confidence 689999999999887776544
No 6
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=79.23 E-value=1 Score=36.39 Aligned_cols=15 Identities=33% Similarity=0.802 Sum_probs=13.8
Q ss_pred CCceEEecchhhHHH
Q 026907 127 GKKIMFVGDSLSLNQ 141 (231)
Q Consensus 127 gkri~FVGDSl~Rnq 141 (231)
|++|+++|||++...
T Consensus 1 ~~~v~~~GDSit~g~ 15 (191)
T cd01834 1 GDRIVFIGNSITDRG 15 (191)
T ss_pred CCEEEEeCCChhhcc
Confidence 789999999999976
No 7
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=77.24 E-value=1.2 Score=35.98 Aligned_cols=13 Identities=54% Similarity=0.820 Sum_probs=11.6
Q ss_pred CceEEecchhhHH
Q 026907 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
|+|+|+|||++..
T Consensus 1 ~~iv~~GdS~t~~ 13 (174)
T cd01841 1 KNIVFIGDSLFEG 13 (174)
T ss_pred CCEEEEcchhhhc
Confidence 7899999999974
No 8
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.52 E-value=3.1 Score=39.31 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=24.4
Q ss_pred HHHhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 122 LEKFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 122 L~~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.+.=.+++|.|||||+++..-+.|...|..
T Consensus 111 ~k~~~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 111 AKSRDADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred hhCCCCCEEEEechHHhhhhHHHHHHHhcc
Confidence 333457899999999999998888888865
No 9
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=66.22 E-value=4 Score=33.89 Aligned_cols=25 Identities=32% Similarity=0.396 Sum_probs=21.5
Q ss_pred cCCceEEecchhhHHHHHHHHHhhcc
Q 026907 126 RGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 126 rgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
+|++|+|||| ..-|.-.|++.++..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4899999999 657899999998864
No 10
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=64.50 E-value=3 Score=33.80 Aligned_cols=16 Identities=25% Similarity=0.329 Sum_probs=12.1
Q ss_pred ceEEecchhhHH-HHHH
Q 026907 129 KIMFVGDSLSLN-QWQS 144 (231)
Q Consensus 129 ri~FVGDSl~Rn-q~~S 144 (231)
||+|+|||++-. .|-+
T Consensus 1 ~iv~~GDS~t~g~~~~~ 17 (189)
T cd01825 1 RIAQLGDSHIAGDFFTD 17 (189)
T ss_pred CeeEecCccccccchhh
Confidence 799999999963 3444
No 11
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=62.44 E-value=3.8 Score=33.50 Aligned_cols=13 Identities=31% Similarity=0.450 Sum_probs=11.4
Q ss_pred ceEEecchhhHHH
Q 026907 129 KIMFVGDSLSLNQ 141 (231)
Q Consensus 129 ri~FVGDSl~Rnq 141 (231)
||+|+|||++...
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 6999999999864
No 12
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=60.60 E-value=4 Score=33.03 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=11.3
Q ss_pred ceEEecchhhHHH
Q 026907 129 KIMFVGDSLSLNQ 141 (231)
Q Consensus 129 ri~FVGDSl~Rnq 141 (231)
||+|+|||++...
T Consensus 1 ~i~~~GDSit~g~ 13 (199)
T cd01838 1 KIVLFGDSITQFS 13 (199)
T ss_pred CEEEecCcccccc
Confidence 6999999999863
No 13
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=60.20 E-value=4.1 Score=33.48 Aligned_cols=13 Identities=46% Similarity=0.810 Sum_probs=11.6
Q ss_pred CceEEecchhhHH
Q 026907 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
++|+|+|||++..
T Consensus 2 ~~i~~lGDSit~G 14 (193)
T cd01835 2 KRLIVVGDSLVYG 14 (193)
T ss_pred cEEEEEcCccccC
Confidence 6899999999975
No 14
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=59.71 E-value=4.1 Score=33.00 Aligned_cols=12 Identities=25% Similarity=0.515 Sum_probs=10.4
Q ss_pred ceEEecchhhHH
Q 026907 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
||+|+|||++..
T Consensus 1 ~i~~~GDSit~G 12 (185)
T cd01832 1 RYVALGDSITEG 12 (185)
T ss_pred CeeEecchhhcc
Confidence 699999999963
No 15
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=57.84 E-value=4 Score=34.53 Aligned_cols=16 Identities=31% Similarity=0.706 Sum_probs=13.0
Q ss_pred cCCceEEecchhhHHH
Q 026907 126 RGKKIMFVGDSLSLNQ 141 (231)
Q Consensus 126 rgkri~FVGDSl~Rnq 141 (231)
...+|+|+|||++...
T Consensus 31 ~~~~iv~lGDSit~g~ 46 (214)
T cd01820 31 KEPDVVFIGDSITQNW 46 (214)
T ss_pred CCCCEEEECchHhhhh
Confidence 3457999999999863
No 16
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=54.69 E-value=1 Score=39.90 Aligned_cols=17 Identities=29% Similarity=0.706 Sum_probs=14.6
Q ss_pred hcCCceEEecchhhHHH
Q 026907 125 FRGKKIMFVGDSLSLNQ 141 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq 141 (231)
|-|.+++||||+|.|+.
T Consensus 132 l~ahkLVfiGDTl~r~~ 148 (210)
T PF12026_consen 132 LSAHKLVFIGDTLCREA 148 (210)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred EEeeeeeeeccHHHHHh
Confidence 77889999999999863
No 17
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=54.29 E-value=5.8 Score=32.25 Aligned_cols=13 Identities=31% Similarity=0.537 Sum_probs=10.7
Q ss_pred ceEEecchhhHHH
Q 026907 129 KIMFVGDSLSLNQ 141 (231)
Q Consensus 129 ri~FVGDSl~Rnq 141 (231)
||+|+|||++...
T Consensus 2 ~i~~~GDSit~G~ 14 (188)
T cd01827 2 KVACVGNSITEGA 14 (188)
T ss_pred eEEEEeccccccc
Confidence 7999999996653
No 18
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=53.87 E-value=6.1 Score=31.99 Aligned_cols=14 Identities=43% Similarity=0.626 Sum_probs=11.5
Q ss_pred ceEEecchhhHHHH
Q 026907 129 KIMFVGDSLSLNQW 142 (231)
Q Consensus 129 ri~FVGDSl~Rnq~ 142 (231)
+|+|+|||++....
T Consensus 1 ~i~~iGDSit~G~~ 14 (169)
T cd01831 1 KIEFIGDSITCGYG 14 (169)
T ss_pred CEEEEeccccccCc
Confidence 68999999988643
No 19
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=53.60 E-value=6.1 Score=31.57 Aligned_cols=12 Identities=42% Similarity=0.684 Sum_probs=10.3
Q ss_pred ceEEecchhhHH
Q 026907 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
||+|+|||++..
T Consensus 2 ~i~~~GDSit~G 13 (177)
T cd01822 2 TILALGDSLTAG 13 (177)
T ss_pred eEEEEccccccC
Confidence 799999999754
No 20
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=53.00 E-value=6.7 Score=32.81 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=12.9
Q ss_pred CCceEEecchhhHHH
Q 026907 127 GKKIMFVGDSLSLNQ 141 (231)
Q Consensus 127 gkri~FVGDSl~Rnq 141 (231)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 679999999999763
No 21
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=51.79 E-value=5.7 Score=31.40 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=10.3
Q ss_pred ceEEecchhhHH
Q 026907 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
+|+++|||++-.
T Consensus 2 ~~~~~Gds~~~g 13 (157)
T cd01833 2 RIMPLGDSITWG 13 (157)
T ss_pred ceeecCCceeec
Confidence 689999998765
No 22
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=49.53 E-value=10 Score=35.04 Aligned_cols=26 Identities=27% Similarity=0.235 Sum_probs=21.8
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||. .|...|++.++..
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 4789999999994 5788999998864
No 23
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=46.73 E-value=7.1 Score=29.70 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=10.7
Q ss_pred eEEecchhhHHHH
Q 026907 130 IMFVGDSLSLNQW 142 (231)
Q Consensus 130 i~FVGDSl~Rnq~ 142 (231)
|+|+|||++....
T Consensus 1 i~~~GDS~~~g~~ 13 (187)
T cd00229 1 ILVIGDSITAGYG 13 (187)
T ss_pred CeeeccccccccC
Confidence 6899999988743
No 24
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.28 E-value=9.4 Score=31.85 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=10.4
Q ss_pred ceEEecchhhHH
Q 026907 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
+|+|+|||++..
T Consensus 1 ~I~~~GDSiT~G 12 (208)
T cd01839 1 TILCFGDSNTWG 12 (208)
T ss_pred CEEEEecCcccC
Confidence 689999999864
No 25
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=44.71 E-value=10 Score=31.01 Aligned_cols=14 Identities=21% Similarity=0.456 Sum_probs=11.7
Q ss_pred CceEEecchhhHHH
Q 026907 128 KKIMFVGDSLSLNQ 141 (231)
Q Consensus 128 kri~FVGDSl~Rnq 141 (231)
.||+|+|||++-..
T Consensus 3 ~~i~~~GDSit~G~ 16 (191)
T cd01836 3 LRLLVLGDSTAAGV 16 (191)
T ss_pred eEEEEEeccccccc
Confidence 37999999999773
No 26
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=44.65 E-value=10 Score=30.71 Aligned_cols=12 Identities=25% Similarity=0.689 Sum_probs=10.4
Q ss_pred CceEEecchhhH
Q 026907 128 KKIMFVGDSLSL 139 (231)
Q Consensus 128 kri~FVGDSl~R 139 (231)
.||+|+|||++.
T Consensus 1 ~~i~~~GDSi~~ 12 (183)
T cd04501 1 MRVVCLGDSITY 12 (183)
T ss_pred CeEEEEcccccc
Confidence 379999999996
No 27
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=43.79 E-value=11 Score=31.55 Aligned_cols=12 Identities=25% Similarity=0.515 Sum_probs=10.3
Q ss_pred ceEEecchhhHH
Q 026907 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
+|+|+|||++..
T Consensus 1 ~iv~~GDSiT~G 12 (204)
T cd01830 1 SVVALGDSITDG 12 (204)
T ss_pred CEEEEecccccC
Confidence 489999999964
No 28
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=43.27 E-value=18 Score=28.15 Aligned_cols=25 Identities=32% Similarity=0.374 Sum_probs=19.4
Q ss_pred CCCHHHHHHHhcCCceEEecchhhH
Q 026907 115 RFNGLYFLEKFRGKKIMFVGDSLSL 139 (231)
Q Consensus 115 rfd~~~fL~~lrgkri~FVGDSl~R 139 (231)
+-.-+++++..-+++.++||||--.
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~ 76 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQH 76 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCc
Confidence 3344568888899999999999543
No 29
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=42.17 E-value=16 Score=34.13 Aligned_cols=27 Identities=22% Similarity=0.276 Sum_probs=22.0
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||..+ |...|++-++..
T Consensus 152 ~l~g~kia~vGD~~~-~v~~Sl~~~~~~ 178 (332)
T PRK04284 152 PYKDIKFTYVGDGRN-NVANALMQGAAI 178 (332)
T ss_pred CcCCcEEEEecCCCc-chHHHHHHHHHH
Confidence 468999999999766 588898888763
No 30
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=41.35 E-value=13 Score=29.86 Aligned_cols=13 Identities=38% Similarity=0.611 Sum_probs=10.8
Q ss_pred eEEecchhhHHHH
Q 026907 130 IMFVGDSLSLNQW 142 (231)
Q Consensus 130 i~FVGDSl~Rnq~ 142 (231)
|+|+|||+++..-
T Consensus 2 v~~~GdSi~~~~~ 14 (169)
T cd01828 2 LVFLGDSLTEGGP 14 (169)
T ss_pred EEEecchhhccCc
Confidence 7999999998643
No 31
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=37.51 E-value=15 Score=30.36 Aligned_cols=14 Identities=29% Similarity=0.314 Sum_probs=11.9
Q ss_pred ceEEecchhhHHHH
Q 026907 129 KIMFVGDSLSLNQW 142 (231)
Q Consensus 129 ri~FVGDSl~Rnq~ 142 (231)
+|+|+|||++....
T Consensus 2 ~i~~~GDS~t~G~~ 15 (198)
T cd01821 2 TIFLAGDSTVADYD 15 (198)
T ss_pred EEEEEecCCcccCC
Confidence 68999999998654
No 32
>PLN02527 aspartate carbamoyltransferase
Probab=37.07 E-value=23 Score=32.75 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=21.7
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhc
Q 026907 124 KFRGKKIMFVGDSLSLNQWQSLACMIH 150 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~ 150 (231)
.++|++|+||||-.+-+...|++-++.
T Consensus 148 ~l~g~kva~vGD~~~~rv~~Sl~~~~~ 174 (306)
T PLN02527 148 RLDGIKVGLVGDLANGRTVRSLAYLLA 174 (306)
T ss_pred CcCCCEEEEECCCCCChhHHHHHHHHH
Confidence 478999999999865467888887764
No 33
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=36.69 E-value=16 Score=29.30 Aligned_cols=12 Identities=33% Similarity=0.285 Sum_probs=10.2
Q ss_pred eEEecchhhHHH
Q 026907 130 IMFVGDSLSLNQ 141 (231)
Q Consensus 130 i~FVGDSl~Rnq 141 (231)
|+|||||+.+.-
T Consensus 2 i~~~g~s~~~~w 13 (171)
T cd04502 2 ILFYGSSSIRLW 13 (171)
T ss_pred EEEEcCchhcch
Confidence 799999988764
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=36.57 E-value=26 Score=28.62 Aligned_cols=20 Identities=20% Similarity=0.537 Sum_probs=15.8
Q ss_pred HHHHHHhc--CCceEEecchhh
Q 026907 119 LYFLEKFR--GKKIMFVGDSLS 138 (231)
Q Consensus 119 ~~fL~~lr--gkri~FVGDSl~ 138 (231)
..+++.|+ +.++++|||+++
T Consensus 185 ~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 185 LRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp HHHHHHHTCTGGGEEEEESSGG
T ss_pred HHHHHHHhcCCCEEEEEccCHH
Confidence 46777776 568999999984
No 35
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=35.52 E-value=24 Score=32.67 Aligned_cols=28 Identities=21% Similarity=0.228 Sum_probs=22.6
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||-..-|...|++-++..
T Consensus 153 ~l~g~kv~~vGD~~~~~v~~Sl~~~~~~ 180 (305)
T PRK00856 153 RLEGLKVAIVGDIKHSRVARSNIQALTR 180 (305)
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence 4789999999997655788888887754
No 36
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=35.16 E-value=26 Score=32.86 Aligned_cols=27 Identities=30% Similarity=0.365 Sum_probs=22.0
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||.-+ |...|++.++..
T Consensus 152 ~l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 152 PLKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 478999999999854 588998888753
No 37
>PLN02342 ornithine carbamoyltransferase
Probab=34.67 E-value=27 Score=33.00 Aligned_cols=27 Identities=26% Similarity=0.441 Sum_probs=22.2
Q ss_pred HHhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 123 EKFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 123 ~~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
..+.|++|+||||- .|...|++.++..
T Consensus 190 G~l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 190 GRLEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred CCcCCCEEEEECCC--chhHHHHHHHHHH
Confidence 34789999999995 3699999998864
No 38
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=34.61 E-value=18 Score=29.88 Aligned_cols=12 Identities=50% Similarity=0.692 Sum_probs=10.7
Q ss_pred ceEEecchhhHH
Q 026907 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
+|+|+|||++..
T Consensus 1 ~i~~~GDSit~G 12 (204)
T cd04506 1 KIVALGDSLTEG 12 (204)
T ss_pred CEeEEeccccCc
Confidence 589999999986
No 39
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=33.70 E-value=26 Score=32.92 Aligned_cols=26 Identities=23% Similarity=0.267 Sum_probs=20.6
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|.+|+||||-.+ |...|++-++..
T Consensus 154 l~g~~ia~vGD~~~-~v~~Sl~~~~~~ 179 (336)
T PRK03515 154 FNEMTLAYAGDARN-NMGNSLLEAAAL 179 (336)
T ss_pred cCCCEEEEeCCCcC-cHHHHHHHHHHH
Confidence 57899999999534 688998888753
No 40
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=33.64 E-value=42 Score=26.90 Aligned_cols=13 Identities=23% Similarity=0.611 Sum_probs=10.6
Q ss_pred CCceEEecchhhH
Q 026907 127 GKKIMFVGDSLSL 139 (231)
Q Consensus 127 gkri~FVGDSl~R 139 (231)
.++++|||||.+=
T Consensus 162 ~~~~i~iGD~~~D 174 (188)
T TIGR01489 162 YQHIIYIGDGVTD 174 (188)
T ss_pred CceEEEECCCcch
Confidence 5689999999764
No 41
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=33.35 E-value=20 Score=27.57 Aligned_cols=12 Identities=33% Similarity=0.603 Sum_probs=9.6
Q ss_pred EEecchhhHHHH
Q 026907 131 MFVGDSLSLNQW 142 (231)
Q Consensus 131 ~FVGDSl~Rnq~ 142 (231)
+|+|||++-...
T Consensus 1 v~~GDS~t~g~~ 12 (179)
T PF13472_consen 1 VFLGDSITAGYG 12 (179)
T ss_dssp EEEESHHHHTTT
T ss_pred CEEccccccCCC
Confidence 699999998643
No 42
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=32.73 E-value=29 Score=32.47 Aligned_cols=26 Identities=19% Similarity=0.252 Sum_probs=20.9
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
+.|++|+||||-.+ |...|++.++..
T Consensus 154 l~gl~ia~vGD~~~-~v~~Sl~~~~~~ 179 (334)
T PRK01713 154 LSEISYVYIGDARN-NMGNSLLLIGAK 179 (334)
T ss_pred cCCcEEEEECCCcc-CHHHHHHHHHHH
Confidence 67899999999654 488888887754
No 43
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=32.65 E-value=21 Score=28.51 Aligned_cols=16 Identities=38% Similarity=0.544 Sum_probs=11.6
Q ss_pred eEEecchhhHHHHHHH
Q 026907 130 IMFVGDSLSLNQWQSL 145 (231)
Q Consensus 130 i~FVGDSl~Rnq~~SL 145 (231)
|.|+|||++-..-..|
T Consensus 2 v~~~GDSv~~~~~~~~ 17 (150)
T cd01840 2 ITAIGDSVMLDSSPAL 17 (150)
T ss_pred eeEEeehHHHchHHHH
Confidence 7899999987643333
No 44
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=31.55 E-value=30 Score=32.52 Aligned_cols=26 Identities=27% Similarity=0.296 Sum_probs=20.9
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIH 150 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~ 150 (231)
++|++|+||||-..-|...|++.+|.
T Consensus 157 l~g~kia~vGD~~~~rv~~Sl~~~l~ 182 (338)
T PRK08192 157 IDGMHIAMVGDLKFGRTVHSLSRLLC 182 (338)
T ss_pred cCCCEEEEECcCCCCchHHHHHHHHH
Confidence 68899999999754577888887664
No 45
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=30.74 E-value=35 Score=32.06 Aligned_cols=22 Identities=36% Similarity=0.514 Sum_probs=19.0
Q ss_pred hcCCceEEecchhhHHHHHHHHHh
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACM 148 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~Cl 148 (231)
++|++++||||- -|+-.||+-.
T Consensus 151 l~g~k~a~vGDg--NNv~nSl~~~ 172 (310)
T COG0078 151 LKGLKLAYVGDG--NNVANSLLLA 172 (310)
T ss_pred ccCcEEEEEcCc--chHHHHHHHH
Confidence 799999999999 8888888643
No 46
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=29.68 E-value=24 Score=31.96 Aligned_cols=12 Identities=50% Similarity=1.173 Sum_probs=9.0
Q ss_pred hcCCceEEecch
Q 026907 125 FRGKKIMFVGDS 136 (231)
Q Consensus 125 lrgkri~FVGDS 136 (231)
|.||+|+||||=
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 789999999994
No 47
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=28.51 E-value=41 Score=32.86 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=21.0
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIH 150 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~ 150 (231)
++|++|+||||-..-|...|++.++.
T Consensus 239 l~G~kIa~vGD~~~~rv~~Sl~~~la 264 (429)
T PRK11891 239 VDGAHIALVGDLKYGRTVHSLVKLLA 264 (429)
T ss_pred cCCCEEEEECcCCCChHHHHHHHHHH
Confidence 67899999999864577888888764
No 48
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=28.38 E-value=38 Score=31.81 Aligned_cols=26 Identities=19% Similarity=0.281 Sum_probs=21.1
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|++|++|||..+ |...|++.++..
T Consensus 154 l~gl~va~vGD~~~-~v~~S~~~~~~~ 179 (334)
T PRK12562 154 FNEMTLVYAGDARN-NMGNSMLEAAAL 179 (334)
T ss_pred cCCcEEEEECCCCC-CHHHHHHHHHHH
Confidence 57899999999864 588898887753
No 49
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=28.24 E-value=33 Score=33.91 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=25.3
Q ss_pred HHHHhcCCceEEecchhhHH-HHHHHHHhhccc
Q 026907 121 FLEKFRGKKIMFVGDSLSLN-QWQSLACMIHSW 152 (231)
Q Consensus 121 fL~~lrgkri~FVGDSl~Rn-q~~SL~ClL~~~ 152 (231)
+-+.++||||+.|-||+-|. -...++.||..+
T Consensus 342 vr~~v~GKrVvlVDDSIVRGTTsr~IV~mlReA 374 (470)
T COG0034 342 VREVVKGKRVVLVDDSIVRGTTSRRIVQMLREA 374 (470)
T ss_pred hHHHhCCCeEEEEccccccCccHHHHHHHHHHh
Confidence 55778999999999999885 456677777743
No 50
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=27.37 E-value=39 Score=31.18 Aligned_cols=29 Identities=31% Similarity=0.311 Sum_probs=22.6
Q ss_pred HHhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 123 EKFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 123 ~~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
..++|++|+||||...-|.-.|++-++..
T Consensus 146 g~l~g~~va~vGD~~~~~v~~Sl~~~~a~ 174 (301)
T TIGR00670 146 GRLDGLKIALVGDLKYGRTVHSLAEALTR 174 (301)
T ss_pred CCCCCCEEEEEccCCCCcHHHHHHHHHHH
Confidence 34789999999997645778888877753
No 51
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=24.81 E-value=38 Score=27.65 Aligned_cols=11 Identities=45% Similarity=0.643 Sum_probs=10.2
Q ss_pred eEEecchhhHH
Q 026907 130 IMFVGDSLSLN 140 (231)
Q Consensus 130 i~FVGDSl~Rn 140 (231)
|+++|||++-.
T Consensus 1 i~~fGDS~td~ 11 (234)
T PF00657_consen 1 IVVFGDSLTDG 11 (234)
T ss_dssp EEEEESHHHHT
T ss_pred CEEEeehhccc
Confidence 68999999998
No 52
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=24.75 E-value=48 Score=30.68 Aligned_cols=26 Identities=19% Similarity=0.287 Sum_probs=20.9
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||. -|...|++-++..
T Consensus 150 ~l~g~~va~vGd~--~rv~~Sl~~~~~~ 175 (311)
T PRK14804 150 PLNQKQLTYIGVH--NNVVNSLIGITAA 175 (311)
T ss_pred CCCCCEEEEECCC--CcHHHHHHHHHHH
Confidence 4789999999993 5778888887753
No 53
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=24.51 E-value=42 Score=30.95 Aligned_cols=42 Identities=21% Similarity=0.165 Sum_probs=27.2
Q ss_pred cCCCCCCCCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 108 PFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 108 P~gC~Lprfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
|.+..+--|.-.+-+..++|++|++||| .+ |...|++.+|..
T Consensus 133 PtQaL~Dl~Ti~e~~g~l~gl~i~~vGd-~~-~v~~Sl~~~l~~ 174 (304)
T PRK00779 133 PCQILADLLTIYEHRGSLKGLKVAWVGD-GN-NVANSLLLAAAL 174 (304)
T ss_pred hHHHHHHHHHHHHHhCCcCCcEEEEEeC-CC-ccHHHHHHHHHH
Confidence 5444333333333334578999999999 34 588898888753
No 54
>COG0540 PyrB Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]
Probab=24.18 E-value=21 Score=33.62 Aligned_cols=44 Identities=18% Similarity=0.130 Sum_probs=37.3
Q ss_pred cCCCCCCCCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 108 PFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 108 P~gC~Lprfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
|.+|-|--|.-.+-...+.|++|++|||=.----..|++.+|..
T Consensus 139 PTQ~LLDl~TI~~~~G~~~gl~iaivGDlkhsRva~S~~~~L~~ 182 (316)
T COG0540 139 PTQALLDLYTIREEFGRLDGLKIAIVGDLKHSRVAHSNIQALKR 182 (316)
T ss_pred ccHHHHHHHHHHHHhCCcCCcEEEEEccccchHHHHHHHHHHHH
Confidence 78888877777777777999999999999888888899988875
No 55
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=23.27 E-value=49 Score=30.44 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=21.0
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
+.|.+|++|||. + +...|++.+|..
T Consensus 146 l~g~~v~~vGd~-~-~v~~Sl~~~l~~ 170 (304)
T TIGR00658 146 LKGVKVVYVGDG-N-NVCNSLMLAGAK 170 (304)
T ss_pred CCCcEEEEEeCC-C-chHHHHHHHHHH
Confidence 688999999996 4 589999988864
No 56
>PF14647 FAM91_N: FAM91 N-terminus
Probab=22.21 E-value=84 Score=29.51 Aligned_cols=31 Identities=26% Similarity=0.302 Sum_probs=25.4
Q ss_pred CCCCCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhccc
Q 026907 112 SIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSW 152 (231)
Q Consensus 112 ~Lprfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~~~ 152 (231)
.||-|.|+|.|+++. ++||||-.|+--..+.
T Consensus 108 sLPNFTAaD~LRllG----------IGRNqYIdlmn~~RS~ 138 (308)
T PF14647_consen 108 SLPNFTAADCLRLLG----------IGRNQYIDLMNKCRSK 138 (308)
T ss_pred cCCCCcHHHHHHHhc----------chHHHHHHHHHHhchh
Confidence 599999999997663 5699999998776654
No 57
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=21.88 E-value=68 Score=22.61 Aligned_cols=19 Identities=26% Similarity=0.347 Sum_probs=13.8
Q ss_pred cCCceEEecchhhHHHHHH
Q 026907 126 RGKKIMFVGDSLSLNQWQS 144 (231)
Q Consensus 126 rgkri~FVGDSl~Rnq~~S 144 (231)
.-.++++||||+..-.--+
T Consensus 20 ~~~~~~~VGD~~~~Di~~a 38 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDIEAA 38 (75)
T ss_dssp GGGGEEEEESSTTTHHHHH
T ss_pred CHHHEEEEcCCcHhHHHHH
Confidence 3468999999976665444
No 58
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=21.05 E-value=49 Score=28.39 Aligned_cols=13 Identities=23% Similarity=0.391 Sum_probs=10.8
Q ss_pred CceEEecchhhHH
Q 026907 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
.+++++|||++-.
T Consensus 1 ~~~v~iGDS~~~G 13 (259)
T cd01823 1 VRYVALGDSYAAG 13 (259)
T ss_pred CCEEEecchhhcC
Confidence 3789999998765
No 59
>PF09084 NMT1: NMT1/THI5 like; InterPro: IPR015168 This entry is found in the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine [, , ]. They are regulated by thiamine []. ; PDB: 2X26_A 3E4R_A 3KSJ_A 3KSX_A 3UIF_A 4DDD_A 1US4_A 1US5_A 3IX1_B 2X7P_A ....
Probab=21.04 E-value=83 Score=25.91 Aligned_cols=25 Identities=28% Similarity=0.193 Sum_probs=19.2
Q ss_pred HHhcCCceEEecchhhHHHHHHHHH
Q 026907 123 EKFRGKKIMFVGDSLSLNQWQSLAC 147 (231)
Q Consensus 123 ~~lrgkri~FVGDSl~Rnq~~SL~C 147 (231)
+-|+||+|++.+.|.+.-.+..++.
T Consensus 89 ~DLkGK~i~v~~~s~~~~~~~~~l~ 113 (216)
T PF09084_consen 89 ADLKGKKIGVSRGSSSEYFLRALLK 113 (216)
T ss_dssp GGGTTSEEEESTTSHHHHHHHHHHH
T ss_pred HHhCCCEEEEecCcchhHHHHHHHH
Confidence 4478999999998887776666553
No 60
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=21.01 E-value=81 Score=26.63 Aligned_cols=35 Identities=20% Similarity=0.099 Sum_probs=24.7
Q ss_pred CCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhcc
Q 026907 115 RFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 115 rfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.-.-.++.+.++||.++|+|-|=.-- -||+-.|..
T Consensus 23 ~~g~~~l~~~l~~k~~vl~G~SGvGK--SSLiN~L~~ 57 (161)
T PF03193_consen 23 GEGIEELKELLKGKTSVLLGQSGVGK--SSLINALLP 57 (161)
T ss_dssp TTTHHHHHHHHTTSEEEEECSTTSSH--HHHHHHHHT
T ss_pred CcCHHHHHHHhcCCEEEEECCCCCCH--HHHHHHHHh
Confidence 44567889999999999999873322 355555544
No 61
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=20.96 E-value=71 Score=30.01 Aligned_cols=24 Identities=29% Similarity=0.444 Sum_probs=20.2
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhc
Q 026907 125 FRGKKIMFVGDSLSLNQWQSLACMIH 150 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~ 150 (231)
+.|++|++|||- .|...|++.++.
T Consensus 152 l~glkv~~vGD~--~~v~~Sl~~~~~ 175 (338)
T PRK02255 152 LEDCKVVFVGDA--TQVCVSLMFIAT 175 (338)
T ss_pred CCCCEEEEECCC--chHHHHHHHHHH
Confidence 678999999995 368999988885
No 62
>PRK10113 cell division modulator; Provisional
Probab=20.17 E-value=48 Score=24.67 Aligned_cols=17 Identities=41% Similarity=0.704 Sum_probs=13.0
Q ss_pred HhcCCceEEe--cchhhHH
Q 026907 124 KFRGKKIMFV--GDSLSLN 140 (231)
Q Consensus 124 ~lrgkri~FV--GDSl~Rn 140 (231)
.||||-++|| |||.-|.
T Consensus 38 ~LrGKYVAFvl~ge~FrRS 56 (80)
T PRK10113 38 MLRGKYVAFVLMGESFLRS 56 (80)
T ss_pred eeccceEEEEEechhhccC
Confidence 5899999997 7776553
Done!