Query 026913
Match_columns 231
No_of_seqs 175 out of 1195
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 01:21:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f7f_A Nicotinate phosphoribos 100.0 1.1E-54 3.8E-59 414.8 22.3 219 1-230 238-462 (494)
2 3dhf_A Nicotinamide phosphorib 100.0 9.3E-38 3.2E-42 297.1 11.6 161 19-209 305-481 (484)
3 2i14_A Nicotinate-nucleotide p 100.0 6.1E-37 2.1E-41 285.6 16.2 171 3-218 219-394 (395)
4 2i1o_A Nicotinate phosphoribos 100.0 3.4E-36 1.2E-40 280.8 16.5 169 3-217 222-396 (398)
5 2im5_A Nicotinate phosphoribos 100.0 6.3E-33 2.2E-37 258.4 6.7 122 4-136 253-387 (394)
6 1yir_A Naprtase 2, nicotinate 100.0 1.4E-32 4.9E-37 257.0 8.1 122 4-135 267-396 (408)
7 1ybe_A Naprtase, nicotinate ph 100.0 6.2E-32 2.1E-36 255.4 7.6 109 21-137 307-428 (449)
8 3os4_A Naprtase, nicotinate ph 100.0 1.6E-31 5.4E-36 249.8 9.3 111 4-124 262-378 (407)
9 4hl7_A Naprtase, nicotinate ph 100.0 5.5E-31 1.9E-35 248.2 8.4 112 4-125 272-397 (446)
10 1vlp_A Naprtase, nicotinate ph 100.0 3.9E-31 1.3E-35 249.5 3.3 120 4-134 286-420 (441)
11 2jbm_A Nicotinate-nucleotide p 99.2 3.9E-11 1.3E-15 107.9 7.2 81 22-116 218-298 (299)
12 3c2e_A Nicotinate-nucleotide p 98.7 6.1E-09 2.1E-13 93.4 5.2 75 22-107 220-294 (294)
13 3gnn_A Nicotinate-nucleotide p 98.5 3.1E-07 1.1E-11 82.6 8.1 69 22-107 230-298 (298)
14 2b7n_A Probable nicotinate-nuc 98.4 2.8E-07 9.6E-12 81.6 6.3 70 22-105 203-272 (273)
15 3paj_A Nicotinate-nucleotide p 98.4 4.6E-07 1.6E-11 82.2 7.7 69 22-107 252-320 (320)
16 1qap_A Quinolinic acid phospho 98.0 6.7E-06 2.3E-10 73.7 5.6 67 22-105 229-295 (296)
17 1qpo_A Quinolinate acid phosph 97.3 0.00075 2.6E-08 60.1 8.5 70 22-105 215-284 (284)
18 3tqv_A Nicotinate-nucleotide p 97.1 0.00093 3.2E-08 59.6 7.3 68 22-106 219-286 (287)
19 1o4u_A Type II quinolic acid p 96.9 0.0017 5.8E-08 57.8 7.1 71 22-106 214-284 (285)
20 3l0g_A Nicotinate-nucleotide p 96.6 0.0052 1.8E-07 55.1 7.6 67 22-105 228-294 (300)
21 1x1o_A Nicotinate-nucleotide p 96.1 0.024 8.3E-07 50.3 9.3 46 57-107 240-285 (286)
22 3f4w_A Putative hexulose 6 pho 90.3 0.4 1.4E-05 39.1 5.4 37 56-94 158-194 (211)
23 2yxb_A Coenzyme B12-dependent 90.1 1.4 4.8E-05 35.2 8.4 66 16-90 66-132 (161)
24 3khj_A Inosine-5-monophosphate 86.5 4.2 0.00015 36.7 10.0 40 57-98 207-247 (361)
25 2v82_A 2-dehydro-3-deoxy-6-pho 85.6 0.47 1.6E-05 38.8 3.0 35 57-93 148-182 (212)
26 3hgj_A Chromate reductase; TIM 85.6 4.4 0.00015 36.1 9.6 75 5-93 238-324 (349)
27 3ctl_A D-allulose-6-phosphate 85.4 1.5 5.2E-05 37.2 6.1 50 34-93 152-202 (231)
28 3l5l_A Xenobiotic reductase A; 83.9 3.9 0.00013 36.7 8.5 75 5-93 245-331 (363)
29 1wa3_A 2-keto-3-deoxy-6-phosph 83.6 0.51 1.7E-05 38.4 2.3 36 55-92 148-183 (205)
30 1tqx_A D-ribulose-5-phosphate 83.3 0.97 3.3E-05 38.4 4.0 36 57-94 173-208 (227)
31 1z41_A YQJM, probable NADH-dep 83.2 4.8 0.00016 35.6 8.7 75 5-93 228-313 (338)
32 4fo4_A Inosine 5'-monophosphat 82.9 5.8 0.0002 36.0 9.2 43 57-101 211-254 (366)
33 1rpx_A Protein (ribulose-phosp 80.8 2.1 7.1E-05 35.4 5.1 50 36-95 166-215 (230)
34 3ffs_A Inosine-5-monophosphate 80.1 6.5 0.00022 36.2 8.6 42 57-100 246-288 (400)
35 1y0e_A Putative N-acetylmannos 79.1 1.3 4.5E-05 36.3 3.2 34 57-92 175-209 (223)
36 3gr7_A NADPH dehydrogenase; fl 79.1 5 0.00017 35.8 7.3 75 5-93 228-313 (340)
37 1vc4_A Indole-3-glycerol phosp 78.0 3.8 0.00013 35.1 6.0 36 57-95 208-244 (254)
38 3inp_A D-ribulose-phosphate 3- 77.6 2.2 7.5E-05 36.8 4.3 50 35-94 181-230 (246)
39 2yw3_A 4-hydroxy-2-oxoglutarat 77.3 1 3.5E-05 37.5 2.0 36 55-92 149-184 (207)
40 4af0_A Inosine-5'-monophosphat 77.2 3.1 0.00011 40.1 5.6 93 7-108 281-379 (556)
41 1yad_A Regulatory protein TENI 76.8 1.1 3.6E-05 37.0 2.0 36 57-94 164-199 (221)
42 3qja_A IGPS, indole-3-glycerol 76.7 2 6.7E-05 37.4 3.8 36 57-94 213-249 (272)
43 2r14_A Morphinone reductase; H 76.7 6 0.0002 35.9 7.2 36 57-93 299-334 (377)
44 1yxy_A Putative N-acetylmannos 76.6 1.5 5.2E-05 36.3 3.0 34 57-92 186-220 (234)
45 2gou_A Oxidoreductase, FMN-bin 76.3 8.6 0.00029 34.6 8.1 75 5-93 249-328 (365)
46 1tqj_A Ribulose-phosphate 3-ep 76.3 2.2 7.6E-05 35.8 3.9 51 34-94 158-208 (230)
47 1mxs_A KDPG aldolase; 2-keto-3 76.2 4.5 0.00015 34.1 5.8 37 54-93 163-200 (225)
48 3cu2_A Ribulose-5-phosphate 3- 76.1 3.7 0.00013 35.0 5.3 35 57-93 187-223 (237)
49 3q58_A N-acetylmannosamine-6-p 75.8 3.5 0.00012 34.8 5.1 34 57-92 181-215 (229)
50 1eep_A Inosine 5'-monophosphat 75.8 8.9 0.0003 34.7 8.1 40 57-98 256-296 (404)
51 1ep3_A Dihydroorotate dehydrog 75.1 3.6 0.00012 35.3 5.1 35 57-93 241-276 (311)
52 3gka_A N-ethylmaleimide reduct 75.0 10 0.00034 34.3 8.2 35 58-93 288-322 (361)
53 1h5y_A HISF; histidine biosynt 74.7 3.7 0.00013 33.5 4.9 35 57-93 198-233 (253)
54 1vyr_A Pentaerythritol tetrani 74.4 11 0.00037 33.9 8.2 75 5-93 250-329 (364)
55 3igs_A N-acetylmannosamine-6-p 74.0 4.9 0.00017 33.9 5.5 34 57-92 181-215 (232)
56 2fli_A Ribulose-phosphate 3-ep 73.9 3.4 0.00012 33.6 4.4 36 57-94 170-205 (220)
57 3kru_A NADH:flavin oxidoreduct 73.2 14 0.00049 32.9 8.7 75 5-94 229-314 (343)
58 1geq_A Tryptophan synthase alp 72.9 3.1 0.00011 34.6 4.0 35 57-93 191-226 (248)
59 4ab4_A Xenobiotic reductase B; 72.8 12 0.00042 33.7 8.2 35 58-93 280-314 (362)
60 1xi3_A Thiamine phosphate pyro 72.1 1.5 5.1E-05 35.4 1.7 36 57-94 162-197 (215)
61 1vrd_A Inosine-5'-monophosphat 70.0 15 0.00052 33.9 8.4 40 57-98 340-380 (494)
62 1jcn_A Inosine monophosphate d 69.5 22 0.00074 33.1 9.3 39 57-97 358-397 (514)
63 4avf_A Inosine-5'-monophosphat 69.4 20 0.0007 33.4 9.1 40 57-98 332-372 (490)
64 2qr6_A IMP dehydrogenase/GMP r 68.3 15 0.00051 33.0 7.7 45 57-103 277-322 (393)
65 2zbt_A Pyridoxal biosynthesis 67.3 4.5 0.00015 34.9 3.9 33 59-93 211-244 (297)
66 2tps_A Protein (thiamin phosph 66.7 1.7 5.9E-05 35.5 1.0 35 57-93 172-206 (227)
67 1h1y_A D-ribulose-5-phosphate 66.4 2.3 8E-05 35.3 1.8 36 57-94 173-208 (228)
68 4e38_A Keto-hydroxyglutarate-a 65.6 4 0.00014 34.9 3.1 37 54-92 171-207 (232)
69 3ajx_A 3-hexulose-6-phosphate 64.9 2.8 9.7E-05 33.8 2.0 36 57-94 158-193 (207)
70 3b0p_A TRNA-dihydrouridine syn 63.6 19 0.00064 32.0 7.3 35 56-93 196-231 (350)
71 3ceu_A Thiamine phosphate pyro 63.5 2.6 9E-05 34.6 1.5 37 56-94 143-179 (210)
72 1jub_A Dihydroorotate dehydrog 62.9 17 0.00057 31.3 6.7 34 57-92 242-276 (311)
73 3bw2_A 2-nitropropane dioxygen 62.7 5.2 0.00018 35.7 3.5 39 57-97 208-247 (369)
74 1vhc_A Putative KHG/KDPG aldol 62.5 5.8 0.0002 33.4 3.6 38 54-93 154-191 (224)
75 3aty_A Tcoye, prostaglandin F2 62.4 27 0.00093 31.5 8.3 36 57-93 307-342 (379)
76 1wbh_A KHG/KDPG aldolase; lyas 62.0 5.7 0.0002 33.1 3.4 38 54-93 153-190 (214)
77 2w6r_A Imidazole glycerol phos 62.0 9.3 0.00032 31.9 4.8 35 57-93 200-235 (266)
78 1ccw_A Protein (glutamate muta 60.6 21 0.00072 27.3 6.3 65 19-91 54-124 (137)
79 3o63_A Probable thiamine-phosp 60.2 2.8 9.6E-05 35.8 1.2 36 57-94 191-226 (243)
80 3usb_A Inosine-5'-monophosphat 59.4 42 0.0014 31.4 9.2 40 57-98 359-399 (511)
81 1ps9_A 2,4-dienoyl-COA reducta 59.2 14 0.00049 35.3 6.1 76 5-94 227-317 (671)
82 2e6f_A Dihydroorotate dehydrog 58.8 16 0.00056 31.4 5.9 35 56-92 243-278 (314)
83 2qjg_A Putative aldolase MJ040 58.0 34 0.0012 28.5 7.7 36 57-94 202-244 (273)
84 1me8_A Inosine-5'-monophosphat 57.7 6.2 0.00021 36.9 3.2 91 6-105 241-338 (503)
85 3lab_A Putative KDPG (2-keto-3 57.1 7 0.00024 33.1 3.1 37 54-92 156-192 (217)
86 2hsa_B 12-oxophytodienoate red 56.8 38 0.0013 30.8 8.2 35 58-93 320-354 (402)
87 2xgg_A Microneme protein 2; A/ 56.7 21 0.00072 27.7 5.8 37 54-90 121-163 (178)
88 3tsm_A IGPS, indole-3-glycerol 56.2 8.9 0.0003 33.4 3.7 37 57-95 220-257 (272)
89 1vzw_A Phosphoribosyl isomeras 55.4 17 0.00059 29.9 5.3 35 57-93 190-228 (244)
90 1rd5_A Tryptophan synthase alp 54.2 15 0.00052 30.8 4.8 35 57-93 201-236 (262)
91 3jr2_A Hexulose-6-phosphate sy 53.8 3.2 0.00011 34.2 0.5 35 57-93 166-200 (218)
92 2gjl_A Hypothetical protein PA 53.8 8.7 0.0003 33.6 3.3 38 57-96 172-210 (328)
93 1gox_A (S)-2-hydroxy-acid oxid 53.0 31 0.0011 30.8 7.0 34 57-92 280-314 (370)
94 4f8x_A Endo-1,4-beta-xylanase; 50.7 12 0.00041 33.5 3.7 39 54-93 170-219 (335)
95 1icp_A OPR1, 12-oxophytodienoa 50.6 15 0.0005 33.2 4.3 35 58-93 302-336 (376)
96 2nv1_A Pyridoxal biosynthesis 50.3 11 0.00037 32.7 3.3 34 59-94 211-245 (305)
97 1yya_A Triosephosphate isomera 48.8 24 0.00083 30.4 5.2 53 36-92 186-238 (250)
98 4hqo_A Sporozoite surface prot 48.7 31 0.0011 28.8 5.9 38 53-90 123-166 (266)
99 3ibs_A Conserved hypothetical 48.7 34 0.0012 26.9 5.9 36 54-89 110-150 (218)
100 3l5a_A NADH/flavin oxidoreduct 48.2 41 0.0014 30.8 7.0 75 5-93 263-352 (419)
101 4fxs_A Inosine-5'-monophosphat 47.4 74 0.0025 29.6 8.8 41 57-99 334-375 (496)
102 1hg3_A Triosephosphate isomera 46.9 24 0.00083 29.7 4.9 37 56-94 175-212 (225)
103 1to3_A Putative aldolase YIHT; 46.8 44 0.0015 29.2 6.8 75 7-93 177-260 (304)
104 2z6i_A Trans-2-enoyl-ACP reduc 45.2 15 0.00052 32.1 3.5 39 57-97 162-201 (332)
105 1w0m_A TIM, triosephosphate is 45.0 45 0.0015 28.1 6.3 37 56-94 172-209 (226)
106 2btm_A TIM, protein (triosepho 44.7 31 0.0011 29.7 5.3 54 35-92 185-238 (252)
107 4e38_A Keto-hydroxyglutarate-a 44.4 1E+02 0.0035 26.0 8.4 37 6-42 46-82 (232)
108 3bo9_A Putative nitroalkan dio 44.2 15 0.00052 32.2 3.3 39 57-97 176-215 (326)
109 2xij_A Methylmalonyl-COA mutas 44.1 53 0.0018 32.7 7.5 69 16-92 652-720 (762)
110 3t7v_A Methylornithine synthas 43.3 1.2E+02 0.0041 26.1 9.1 71 7-87 95-169 (350)
111 1p0k_A Isopentenyl-diphosphate 43.2 56 0.0019 28.5 6.9 36 56-93 250-286 (349)
112 1f76_A Dihydroorotate dehydrog 42.9 47 0.0016 28.8 6.3 34 57-92 289-323 (336)
113 4adt_A Pyridoxine biosynthetic 42.6 14 0.00047 32.6 2.8 35 58-94 210-245 (297)
114 1n3y_A Integrin alpha-X; alpha 42.5 30 0.001 26.8 4.6 38 53-90 108-152 (198)
115 1ka9_F Imidazole glycerol phos 41.9 70 0.0024 26.1 7.0 75 7-93 32-110 (252)
116 3tdn_A FLR symmetric alpha-bet 41.5 5.5 0.00019 33.2 0.0 36 57-94 200-236 (247)
117 3r2g_A Inosine 5'-monophosphat 41.3 30 0.001 31.2 4.9 70 7-87 100-171 (361)
118 4a3u_A NCR, NADH\:flavin oxido 40.8 14 0.00049 33.0 2.6 36 58-94 287-322 (358)
119 3ovp_A Ribulose-phosphate 3-ep 40.4 13 0.00043 31.3 2.1 36 57-94 169-204 (228)
120 2yc6_A Triosephosphate isomera 40.3 40 0.0014 29.1 5.3 36 56-92 207-242 (257)
121 1qo2_A Molecule: N-((5-phospho 40.2 61 0.0021 26.5 6.3 72 7-93 145-229 (241)
122 4hqf_A Thrombospondin-related 39.9 51 0.0017 27.6 5.9 36 54-89 127-168 (281)
123 2h6r_A Triosephosphate isomera 39.7 36 0.0012 28.1 4.8 36 57-94 170-206 (219)
124 1ka9_F Imidazole glycerol phos 39.1 39 0.0013 27.6 5.0 36 57-94 196-232 (252)
125 1ijb_A VON willebrand factor; 38.6 34 0.0012 27.1 4.3 36 54-89 114-157 (202)
126 1shu_X Anthrax toxin receptor 38.4 98 0.0034 23.3 7.0 34 54-87 102-143 (182)
127 1b9b_A TIM, protein (triosepho 38.3 28 0.00095 30.1 4.0 53 36-92 188-240 (255)
128 1mzh_A Deoxyribose-phosphate a 37.7 1.5E+02 0.0051 24.3 8.4 66 7-87 133-204 (225)
129 1req_A Methylmalonyl-COA mutas 37.6 67 0.0023 31.8 7.0 69 16-92 644-712 (727)
130 1thf_D HISF protein; thermophI 37.1 91 0.0031 25.4 6.9 78 7-93 31-109 (253)
131 2b2x_A Integrin alpha-1; compu 36.9 56 0.0019 26.1 5.5 37 53-89 122-164 (223)
132 1aw2_A Triosephosphate isomera 36.9 26 0.00089 30.3 3.6 36 56-92 205-240 (256)
133 2y88_A Phosphoribosyl isomeras 36.8 18 0.00061 29.7 2.4 35 57-93 193-231 (244)
134 3vk5_A MOEO5; TIM barrel, tran 36.5 89 0.003 27.5 7.0 35 57-93 227-262 (286)
135 2j27_A Triosephosphate isomera 36.3 30 0.001 29.8 3.9 53 36-92 187-239 (250)
136 1mf7_A Integrin alpha M; cell 35.8 34 0.0012 26.5 3.9 37 54-90 105-148 (194)
137 1o5x_A TIM, triosephosphate is 35.7 34 0.0012 29.4 4.1 53 36-92 185-237 (248)
138 1mxs_A KDPG aldolase; 2-keto-3 35.7 1.1E+02 0.0036 25.4 7.2 31 5-35 37-67 (225)
139 3tdn_A FLR symmetric alpha-bet 35.5 43 0.0015 27.6 4.7 72 7-93 36-114 (247)
140 1jgt_A Beta-lactam synthetase; 35.3 35 0.0012 31.9 4.5 58 30-89 217-276 (513)
141 3lab_A Putative KDPG (2-keto-3 34.4 1.8E+02 0.0061 24.3 8.4 63 5-79 24-86 (217)
142 3n2n_F Anthrax toxin receptor 34.3 61 0.0021 24.6 5.1 33 55-87 106-146 (185)
143 1thf_D HISF protein; thermophI 33.8 26 0.0009 28.7 3.0 35 57-93 195-230 (253)
144 1xm3_A Thiazole biosynthesis p 33.5 47 0.0016 28.2 4.6 37 56-94 177-214 (264)
145 3kbq_A Protein TA0487; structu 33.5 1.1E+02 0.0037 24.6 6.6 39 7-45 24-62 (172)
146 2jgq_A Triosephosphate isomera 33.4 41 0.0014 28.6 4.2 51 34-92 172-222 (233)
147 2c6q_A GMP reductase 2; TIM ba 32.9 2.5E+02 0.0087 24.7 10.8 40 57-98 223-263 (351)
148 1q15_A CARA; CMPR, (2S,5S)-5-c 32.9 43 0.0015 31.2 4.6 58 30-89 214-273 (503)
149 2vxn_A Triosephosphate isomera 32.7 43 0.0015 28.8 4.3 53 36-92 188-240 (251)
150 1pt6_A Integrin alpha-1; cell 32.4 59 0.002 25.7 4.9 37 53-89 107-149 (213)
151 3o74_A Fructose transport syst 32.3 1E+02 0.0035 24.5 6.4 54 11-70 111-165 (272)
152 3nl6_A Thiamine biosynthetic b 32.3 34 0.0011 32.5 3.8 40 56-95 172-217 (540)
153 2nli_A Lactate oxidase; flavoe 32.3 1.2E+02 0.0041 27.0 7.4 71 9-92 240-318 (368)
154 1vcf_A Isopentenyl-diphosphate 32.3 1.1E+02 0.0036 26.6 6.9 34 57-92 256-290 (332)
155 1tre_A Triosephosphate isomera 31.4 45 0.0015 28.7 4.2 53 35-92 186-238 (255)
156 1r2r_A TIM, triosephosphate is 31.1 40 0.0014 29.0 3.7 54 35-92 184-237 (248)
157 3rot_A ABC sugar transporter, 30.6 1.1E+02 0.0039 24.9 6.5 64 13-85 27-93 (297)
158 1mo0_A TIM, triosephosphate is 30.5 38 0.0013 29.6 3.6 53 36-92 204-256 (275)
159 1vcv_A Probable deoxyribose-ph 30.3 1.6E+02 0.0054 24.7 7.3 46 36-89 171-220 (226)
160 1zfj_A Inosine monophosphate d 30.0 3.1E+02 0.011 24.8 11.1 39 57-97 336-375 (491)
161 3niy_A Endo-1,4-beta-xylanase; 30.0 98 0.0033 27.4 6.3 37 56-93 184-231 (341)
162 3zwt_A Dihydroorotate dehydrog 29.2 1.8E+02 0.0062 25.9 8.0 34 57-92 298-332 (367)
163 1uta_A FTSN, MSGA, cell divisi 28.9 83 0.0028 21.4 4.6 54 5-65 20-81 (81)
164 2i9e_A Triosephosphate isomera 28.8 53 0.0018 28.4 4.2 54 35-92 183-236 (259)
165 1h5y_A HISF; histidine biosynt 28.4 2.2E+02 0.0075 22.5 8.0 74 7-92 34-111 (253)
166 1gte_A Dihydropyrimidine dehyd 28.1 78 0.0027 32.0 5.9 35 56-92 786-821 (1025)
167 1m6j_A TIM, TPI, triosephospha 28.1 47 0.0016 28.7 3.7 36 56-92 211-246 (261)
168 2v5b_A Triosephosphate isomera 27.7 1E+02 0.0035 26.3 5.7 35 56-91 198-232 (244)
169 3r2g_A Inosine 5'-monophosphat 27.7 1.2E+02 0.004 27.3 6.4 39 59-99 201-240 (361)
170 3exr_A RMPD (hexulose-6-phosph 27.2 41 0.0014 27.8 3.1 36 57-94 168-203 (221)
171 2fep_A Catabolite control prot 26.6 2.2E+02 0.0074 23.0 7.6 63 13-85 40-102 (289)
172 1qop_A Tryptophan synthase alp 26.2 65 0.0022 27.2 4.3 35 57-93 205-240 (268)
173 1v7p_C Integrin alpha-2; snake 25.9 49 0.0017 25.9 3.3 35 54-88 107-147 (200)
174 4avf_A Inosine-5'-monophosphat 25.8 2E+02 0.0069 26.5 7.9 90 7-107 229-326 (490)
175 4ef8_A Dihydroorotate dehydrog 25.8 77 0.0026 28.3 4.8 35 56-92 276-311 (354)
176 2i6t_A Ubiquitin-conjugating e 25.2 76 0.0026 27.5 4.6 35 58-92 120-155 (303)
177 2y88_A Phosphoribosyl isomeras 25.0 2.6E+02 0.0091 22.3 7.9 72 7-92 32-108 (244)
178 1w32_A Endo-1,4-beta-xylanase 24.8 1.4E+02 0.0047 26.4 6.3 65 39-109 161-249 (348)
179 3qst_A Triosephosphate isomera 24.5 59 0.002 28.0 3.7 36 56-92 206-241 (255)
180 2jvf_A De novo protein M7; tet 24.3 1.9E+02 0.0066 20.4 5.9 40 24-70 22-62 (96)
181 3krs_A Triosephosphate isomera 24.2 52 0.0018 28.7 3.3 36 56-92 225-260 (271)
182 1tv5_A Dhodehase, dihydroorota 24.2 3.1E+02 0.011 25.2 8.8 34 57-92 373-407 (443)
183 1kbi_A Cytochrome B2, L-LCR; f 24.1 2.1E+02 0.0071 26.8 7.7 75 9-92 354-437 (511)
184 2w6r_A Imidazole glycerol phos 24.1 85 0.0029 25.8 4.5 70 7-91 31-107 (266)
185 3g1w_A Sugar ABC transporter; 23.9 2.3E+02 0.008 22.8 7.3 64 13-85 28-93 (305)
186 4fo4_A Inosine 5'-monophosphat 23.8 2.3E+02 0.0079 25.3 7.6 65 10-85 111-177 (366)
187 2x5n_A SPRPN10, 26S proteasome 23.8 1.2E+02 0.0041 24.2 5.3 33 58-90 109-147 (192)
188 1w8s_A FBP aldolase, fructose- 23.7 2E+02 0.0068 24.2 6.9 36 58-95 197-239 (263)
189 4g1k_A Triosephosphate isomera 23.5 1E+02 0.0034 26.8 5.0 46 37-90 213-258 (272)
190 1vhn_A Putative flavin oxidore 23.5 72 0.0025 27.5 4.1 35 57-93 183-219 (318)
191 1v0l_A Endo-1,4-beta-xylanase 22.9 1.1E+02 0.0036 26.7 5.1 37 56-93 163-211 (313)
192 1me8_A Inosine-5'-monophosphat 22.8 1.2E+02 0.0042 28.0 5.8 40 56-97 351-391 (503)
193 3m9y_A Triosephosphate isomera 22.8 60 0.002 27.9 3.3 51 38-92 192-242 (254)
194 1vzw_A Phosphoribosyl isomeras 22.6 2.4E+02 0.0081 22.7 7.0 72 7-92 33-109 (244)
195 1ney_A TIM, triosephosphate is 22.5 41 0.0014 28.9 2.2 54 35-92 183-236 (247)
196 1p4c_A L(+)-mandelate dehydrog 22.5 94 0.0032 27.8 4.8 32 59-92 280-312 (380)
197 3iix_A Biotin synthetase, puta 22.1 2.7E+02 0.0094 23.5 7.6 71 6-87 87-159 (348)
198 1atz_A VON willebrand factor; 21.9 99 0.0034 23.7 4.3 36 54-89 107-146 (189)
199 3o6p_A Peptide ABC transporter 21.8 74 0.0025 25.3 3.6 39 36-75 80-118 (229)
200 1vrd_A Inosine-5'-monophosphat 21.7 2.5E+02 0.0086 25.5 7.6 65 8-81 238-302 (494)
201 1q6o_A Humps, 3-keto-L-gulonat 21.5 28 0.00097 28.3 1.0 36 57-94 163-198 (216)
202 2h3h_A Sugar ABC transporter, 21.4 1.9E+02 0.0064 23.7 6.2 63 14-85 25-89 (313)
203 3brq_A HTH-type transcriptiona 20.9 3.2E+02 0.011 21.7 7.9 61 14-85 46-108 (296)
204 2bdq_A Copper homeostasis prot 20.7 49 0.0017 28.1 2.3 50 23-77 59-115 (224)
205 3abq_B Ethanolamine ammonia-ly 20.5 21 0.00072 31.8 -0.0 33 35-72 154-186 (306)
206 3dpi_A NAD+ synthetase; ssgcid 20.2 1E+02 0.0035 26.8 4.3 38 31-75 25-66 (285)
207 4a29_A Engineered retro-aldol 20.0 1.1E+02 0.0037 26.5 4.4 36 57-94 205-240 (258)
No 1
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=1.1e-54 Score=414.85 Aligned_cols=219 Identities=37% Similarity=0.550 Sum_probs=206.7
Q ss_pred CcCchHHHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCc
Q 026913 1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE 80 (231)
Q Consensus 1 l~sGv~naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~ 80 (231)
++|||++||+++++|.+. ..+.|||+|||||.++++++|++||++ |+++++|++|||||+++|.+|.++|++
T Consensus 238 l~~gv~~al~~~~~l~~~-~~~~gIRlDSgd~~~l~~~~r~~ld~~-------G~~~~kI~aSggld~~~i~~l~~~G~~ 309 (494)
T 2f7f_A 238 LKAGVPSAIRVAREMGDK-INFLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSK 309 (494)
T ss_dssp TTTHHHHHHHHHHHHGGG-SEEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTCEEEECSSCCHHHHHHHHHTTCC
T ss_pred hhhhHHHHHHHHHHhhhh-cCCeEEEcCCCCHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHcCCC
Confidence 358999999999998654 468899999999999999999999998 888999999999999999999999999
Q ss_pred ccEEeeCCcccccCCCCccceEEEEeEE---CCc--cccccCCCCCCCCCCccceeEeecC-CCCceeeeeeecCCCCCC
Q 026913 81 VDAFGIGTYLVTCYAQAALGCVFKLVEI---NKQ--PRIKLSEDVSKVSIPCKKRSYRLYG-KEGYPLVDIMTGENEPPP 154 (231)
Q Consensus 81 id~fGvGT~l~~~~~~p~l~~vyKlv~~---~g~--p~~K~S~~~~K~t~PG~K~v~R~~~-~~g~~~~D~i~l~~e~~~ 154 (231)
+++|||||+|+++.++|++++|||||++ ||+ |++|+|++++|.|+||+|+|||+|+ .+|.+..|+|++.+|+++
T Consensus 310 ~~sfGvGT~Lt~~~~~~~ld~v~Klv~~~~~~G~~~pv~K~s~~~~K~s~pG~k~v~R~~~~~~g~~~~d~i~~~~e~~~ 389 (494)
T 2f7f_A 310 IDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPR 389 (494)
T ss_dssp CCEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCCGG
T ss_pred EEEEecCcccccCCCCCcccEEEEEEEEEcCCCcCccccccCCCCCCcCCCCceEEEEEeecCCCeEEEEEEEecCCCCc
Confidence 9999999999999999999999999999 999 9999999999999999999999997 578999999999998643
Q ss_pred CCCcceeecCCCCcccceeecCccccccceeeeeCCCCeeecCCCCHHHHHHHHHHHHhcCChhhhhccCCCCCcC
Q 026913 155 KVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKV 230 (231)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~~~~~~~~~LL~~v~~~~~G~~~~~~~sl~~iR~~~~~~l~~L~~~~~rl~~p~~Y~V 230 (231)
.++.++|+||+++|+++++.++..++||+||| ++|+++++.|||++||+|++++|++||++++|+.|||+|+|
T Consensus 390 -~~~~~~~~~p~~~~~~~~~~~~~~~~ll~~v~--~~G~~~~~~~~l~eir~~~~~~l~~l~~~~~r~~~p~~y~v 462 (494)
T 2f7f_A 390 -QEEEIYMFHPVHTFINKYVRDFEARPVLQDIF--VEGKRVYELPTLDEIKQYAKENLDSLHEEYKRDLNPQKYPV 462 (494)
T ss_dssp -GCSEEEEECSSSTTSEEEEESEEEEECCEEEE--ETTEECCCCCCHHHHHHHHHHHHHHSCHHHHCSSSCCCCCE
T ss_pred -cccceeeeCcchhhhhccccCccchhhhhhhh--cCCEEcCCCCCHHHHHHHHHHHHHhCCHHHhcccCCcCCcc
Confidence 46678999999999999999999999999999 99999999999999999999999999999999999999998
No 2
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=100.00 E-value=9.3e-38 Score=297.13 Aligned_cols=161 Identities=17% Similarity=0.188 Sum_probs=136.5
Q ss_pred CCCccEEeeCCCChHHHHHHHHHHHHHH-hHhhCCCCC---C-CeEEEEeCCCCHHH----HHHHHhcCCcccE--EeeC
Q 026913 19 GYKAVGIRLDSGDLAYLSCEARKFFRTI-EKEFGVPDF---E-KMSITASNDLNEET----LDALNKQGHEVDA--FGIG 87 (231)
Q Consensus 19 g~~~~gVRlDSGDl~~ls~~~r~~ld~~-~~~l~~~g~---~-~v~I~~S~~Lde~~----i~~l~~~g~~id~--fGvG 87 (231)
+.++ |||+|||||+++++++|++||+. |-..|.+|+ + +++||+||||||++ |..|.++|+++|. ||||
T Consensus 305 ~~~l-gVR~DSGD~~~~~~~vr~~Ld~~fG~~~n~~G~kvl~~~~~Ii~Sd~Lde~~~~~ii~~l~~~G~~~d~v~fGvG 383 (484)
T 3dhf_A 305 QAPL-IIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENIAFGSG 383 (484)
T ss_dssp TSCE-EEECCSSCHHHHHHHHHHHHHHHSCCEECTTSCEECCTTEEEEECSSCSHHHHHHHHHHHHHTTBCGGGEEEEES
T ss_pred CCcE-EEECCCCChHHHHHHHHHHHHHHhCCcccccccccCCCCEEEEEcCCCCHHHHHHHHHHHHhCCCCcccceEccc
Confidence 4445 99999999999999999999995 444455798 8 89999999999999 7778889998887 9999
Q ss_pred CcccccCCCCccceEEE--EeEECC--ccccccC-CCCCCCCCCccceeEeecCCCCceeeeeeecCCCCCCCCCcceee
Q 026913 88 TYLVTCYAQAALGCVFK--LVEINK--QPRIKLS-EDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILC 162 (231)
Q Consensus 88 T~l~~~~~~p~l~~vyK--lv~~~g--~p~~K~S-~~~~K~t~PG~K~v~R~~~~~g~~~~D~i~l~~e~~~~~~~~~~~ 162 (231)
|+|+|+.++|++++||| +|++|| +|++|+| +|++|.|+||+|+|||. .+| |++++.+|..+..
T Consensus 384 T~L~~~~~~~~l~~v~K~~~v~~~G~~~pv~K~s~td~~K~S~pG~k~v~r~--~~g----~~~~~~~~~~~~~------ 451 (484)
T 3dhf_A 384 GGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKRSKKGRLSLHRT--PAG----NFVTLEEGKGDLE------ 451 (484)
T ss_dssp HHHHTSCCTTTTTEEEEEEEEEETTEEEECCCCCTTCGGGCCCCSSCEEEEC--TTS----CEEEECTTGGGGC------
T ss_pred CccccCCCCCCCCEEEEEEEEEECCccceeeecCCCCCCccCCCcceEEEEe--CCC----cEEEecCCCCCcc------
Confidence 99999999999999999 778899 7999999 57999999999999996 234 6778776532110
Q ss_pred cCCCCcccceeecCccccccceeeeeCCCCeeecCCCCHHHHHHHHH
Q 026913 163 RHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCI 209 (231)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~LL~~v~~~~~G~~~~~~~sl~~iR~~~~ 209 (231)
. ..++||+||| +||+++ ..+||++||+|++
T Consensus 452 -------------~-~~~~lL~~v~--~~G~~~-~~~~l~eiR~~~~ 481 (484)
T 3dhf_A 452 -------------E-YGQDLLHTVF--KNGKVT-KSYSFDEIRKNAQ 481 (484)
T ss_dssp -------------S-SCCCSCEEEE--ETTEEC-CCCCHHHHHHHTC
T ss_pred -------------c-cccccchhhe--ECCEEc-CCCCHHHHHHHHh
Confidence 0 1368999999 999999 4589999999975
No 3
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=6.1e-37 Score=285.58 Aligned_cols=171 Identities=25% Similarity=0.375 Sum_probs=151.6
Q ss_pred CchHHHHHHHHHHHhcCCCccEEeeCC-----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhc
Q 026913 3 SGVPNFCAVALALNDLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (231)
Q Consensus 3 sGv~naI~va~~l~~~g~~~~gVRlDS-----GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~ 77 (231)
.++++||+++++| +..+.|||+|| ||+.++++++|++||++ |+++++|++||||||++|.+|.++
T Consensus 219 ~~~~~al~~~~~~---~~~~d~IrlDs~~~~~gd~~~~v~~~r~~ld~~-------G~~~~~I~aSggl~~~~i~~l~~~ 288 (395)
T 2i14_A 219 DEKVEAVMAAEAL---GKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVR-------GYDWVKIFVSGGLDEEKIKEIVDV 288 (395)
T ss_dssp CHHHHHHHHHTTT---GGGCCEEEECCCTTTCSCHHHHHHHHHHHHHHT-------TCCSCEEEEESSCCHHHHHTTGGG
T ss_pred HHHHHHHHHHHHh---ccCCcEEEeCCCCCCcccHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHh
Confidence 4789999998665 45688999999 99999999999999998 888999999999999999999988
Q ss_pred CCcccEEeeCCcccccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeEeecCCCCceeeeeeecCCCCCCCCC
Q 026913 78 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVG 157 (231)
Q Consensus 78 g~~id~fGvGT~l~~~~~~p~l~~vyKlv~~~g~p~~K~S~~~~K~t~PG~K~v~R~~~~~g~~~~D~i~l~~e~~~~~~ 157 (231)
+|+|||||.+.+ +|++++||||+++||+|++|+| ++||+|+|||+|+ | .|+|++.+|+++.
T Consensus 289 ---vD~~gvGt~l~~---~~~ld~~~klv~~~g~p~~K~s------~~pG~k~~~R~~~--~---~d~~~~~~e~~~~-- 349 (395)
T 2i14_A 289 ---VDAFGVGGAIAS---AKPVDFALDIVEVEGKPIAKRG------KLSGRKQVYRCEN--G---HYHVVPANKKLER-- 349 (395)
T ss_dssp ---CSEEEECHHHHT---CCCCCCEEEEEEETTEECCCTT------SCCSCEEEEEETT--S---CEEEEETTSCCCB--
T ss_pred ---CCEEEeCcccCC---CCCccEEEEEEEeCCcceeeec------CCCCceEEEEEcC--C---ceEEEeCCCCCcc--
Confidence 899999999985 7999999999999999999998 5899999999986 3 4999999886331
Q ss_pred cceeecCCCCcccceeecCccccccceeeeeCCCCeeecCCCCHHHHHHHHHHHHhcCChh
Q 026913 158 ERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPD 218 (231)
Q Consensus 158 ~~~~~~~p~~~~~~~~~~~~~~~~LL~~v~~~~~G~~~~~~~sl~~iR~~~~~~l~~L~~~ 218 (231)
. | ..+...++||+||| ++|+++++.||+++||+|++++|++||++
T Consensus 350 ~------~--------~~~~~~~~ll~~~~--~~G~~~~~~~~l~~~r~~~~~~l~~l~~~ 394 (395)
T 2i14_A 350 C------P--------VCNAKVEPLLKPII--ENGEIVVEFPKAREIREYVLEQAKKFNLE 394 (395)
T ss_dssp C------S--------SSCCBEEECCEEEE--BTTBCCCCCCCHHHHHHHHHHHHHHTTCC
T ss_pred c------c--------cccccccchhhhhh--cCCEECCCCCCHHHHHHHHHHHHHhCCCC
Confidence 0 0 11234689999999 99999999999999999999999999876
No 4
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=100.00 E-value=3.4e-36 Score=280.77 Aligned_cols=169 Identities=26% Similarity=0.359 Sum_probs=149.4
Q ss_pred CchHHHHHHHHHHHhcCCCccEEeeCC-----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhc
Q 026913 3 SGVPNFCAVALALNDLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (231)
Q Consensus 3 sGv~naI~va~~l~~~g~~~~gVRlDS-----GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~ 77 (231)
.++++|+++|++| ..+.|||+|| ||+.++++++|++||++ |+++++|++|||||+++|.+|.++
T Consensus 222 ~~~~~al~~a~~l----~~~d~IrlDs~~~~~gd~~~~v~~v~~~ld~~-------G~~~~~I~aSggl~~~~i~~l~~~ 290 (398)
T 2i1o_A 222 DEKFAAIKIAEMF----DKVDYIRLDTPSSRRGNFEALIREVRWELALR-------GRSDIKIMVSGGLDENTVKKLREA 290 (398)
T ss_dssp CHHHHHHHHHTTC----SCCCEEEECCCGGGCSCHHHHHHHHHHHHHHT-------TCTTSEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh----cCCcEEEeCCCCCCcccHHHHHHHHHHHHHhC-------CCCceEEEEeCCCCHHHHHHHHHc
Confidence 4699999999776 3588999999 99999999999999998 888999999999999999999999
Q ss_pred CCcccEEeeCCcccccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeEeecCCCCceeeee-eecCCCCCCCC
Q 026913 78 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDI-MTGENEPPPKV 156 (231)
Q Consensus 78 g~~id~fGvGT~l~~~~~~p~l~~vyKlv~~~g~p~~K~S~~~~K~t~PG~K~v~R~~~~~g~~~~D~-i~l~~e~~~~~ 156 (231)
|+ |+|||||.+.+ +|++++||||+++||+|++|+| ++||+|+|||+|+ | .|+ |++.+|+++..
T Consensus 291 Gv--D~~gvGt~l~~---~~~ld~~~Klv~~~g~p~~K~s------~~pG~k~~~r~~~--~---~d~~~~~~~~~~~~~ 354 (398)
T 2i1o_A 291 GA--EAFGVGTSISS---AKPFDFAMDIVEVNGKPETKRG------KMSGRKNVLRCTS--C---HRIEVVPANVQEKTC 354 (398)
T ss_dssp TC--CEEEECHHHHT---CCCCCEEEEEEEETTEECCCTT------SCCSCEEEEEETT--T---CCEEEEETTCCEECC
T ss_pred CC--CEEEeCcccCC---CCCccEEEEEEEeCCcceEeec------CCCCceEEEEEcC--C---CeEEEEecCCCCccc
Confidence 95 99999999985 7999999999999999999998 5899999999986 3 488 99988753210
Q ss_pred CcceeecCCCCcccceeecCccccccceeeeeCCCCeeecCCCCHHHHHHHHHHHHhcCCh
Q 026913 157 GERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRP 217 (231)
Q Consensus 157 ~~~~~~~~p~~~~~~~~~~~~~~~~LL~~v~~~~~G~~~~~~~sl~~iR~~~~~~l~~L~~ 217 (231)
..+...++||+||| ++|+++++.|||++||+|++++|++||.
T Consensus 355 -----------------~~~~~~~~ll~~~~--~~G~~~~~~~~l~~~r~~~~~~l~~l~~ 396 (398)
T 2i1o_A 355 -----------------ICGGSMQNLLVKYL--SHGKRTSEYPRPKEIRSRSMKELEYFKD 396 (398)
T ss_dssp -----------------SSSSCEEECCEEEE--ETTEESSCCCCHHHHHHHHHHHGGGGC-
T ss_pred -----------------ccCccccchhhhhe--eCCEEcCCCCCHHHHHHHHHHHHHhCcC
Confidence 11234689999999 9999999999999999999999999975
No 5
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=99.97 E-value=6.3e-33 Score=258.44 Aligned_cols=122 Identities=21% Similarity=0.207 Sum_probs=110.7
Q ss_pred chHHHHHH-HHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCC-eE-EEEeCCCCHHHHHHHHh--cC
Q 026913 4 GVPNFCAV-ALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-MS-ITASNDLNEETLDALNK--QG 78 (231)
Q Consensus 4 Gv~naI~v-a~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~-v~-I~~S~~Lde~~i~~l~~--~g 78 (231)
+..+|++. .+++ +..+.|||+|||||+++++++|++||++ |+++ +| ||+||||||++|.+|.+ +|
T Consensus 253 d~~~fl~~~~~~~---~~~~~gVR~DSGD~~~~~~~~r~~ld~~-------G~~~~~k~Ii~SdgLd~~~i~~l~~~~~g 322 (394)
T 2im5_A 253 TTDVFMRNFSKKH---AMLFTSLRHDSGDPEIFIEKAVRRYEEL-------RVDPKIKYIIFSDSLTPQRAIEIQKLCAG 322 (394)
T ss_dssp CHHHHHHHCCHHH---HHHCCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGCEEEECSSCCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHh---hhcceEEEcCCCCHHHHHHHHHHHHHHc-------CcCcCccEEEEcCCCCHHHHHHHHHHhcC
Confidence 45667754 3444 2457899999999999999999999997 8877 99 99999999999999999 89
Q ss_pred CcccEEeeCCcccccCC--CCccceEEEEeEEC------CccccccCCCCCCCCCCccceeEeecC
Q 026913 79 HEVDAFGIGTYLVTCYA--QAALGCVFKLVEIN------KQPRIKLSEDVSKVSIPCKKRSYRLYG 136 (231)
Q Consensus 79 ~~id~fGvGT~l~~~~~--~p~l~~vyKlv~~~------g~p~~K~S~~~~K~t~PG~K~v~R~~~ 136 (231)
+++|+|||||+|+|+.+ +|++++|||||+++ |+|++|+|++++|.|.| .|+|||+..
T Consensus 323 ~~~d~FGvGT~L~~~~~~~~~~l~~V~Klv~~~~~~~~~g~p~~KlS~~~~K~t~p-~k~v~r~~~ 387 (394)
T 2im5_A 323 RIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTGE-PEEILLAMN 387 (394)
T ss_dssp TSEEEEEECHHHHSCCSTTCCCCCEEEEEEEEESSTTSCCEECCBCCSSTTCCBSC-HHHHHHHHH
T ss_pred CCceEEEeCcccccCCCCCCCccceEeeeeeecccccCCCCceEEecCCCCCccCC-HHHHHHHHH
Confidence 99999999999999998 99999999999998 99999999999999999 999999864
No 6
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=1.4e-32 Score=257.05 Aligned_cols=122 Identities=20% Similarity=0.231 Sum_probs=104.9
Q ss_pred chHHHHHH-HHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCC-e-EEEEeCCCCHHHHHHHHh--cC
Q 026913 4 GVPNFCAV-ALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-M-SITASNDLNEETLDALNK--QG 78 (231)
Q Consensus 4 Gv~naI~v-a~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~-v-~I~~S~~Lde~~i~~l~~--~g 78 (231)
+..+|++- .+++ +..+.|||+|||||.++++++|++||++ |+++ + +||+||||||++|.+|.+ +|
T Consensus 267 d~~~fl~~~~~~~---~~~~~GVR~DSGD~~~~~~~~r~~ld~~-------G~~~~~K~Iv~SdgLde~~i~~l~~~~~~ 336 (408)
T 1yir_A 267 TTDAFLRDFDLYF---AKLFDGLRHDSGDPLLWAEKTIAHYLKL-------GIDPLTKTLVFSDGLDLPRALKIYRALQG 336 (408)
T ss_dssp CHHHHHHHCCHHH---HHHCCEEEECSSCHHHHHHHHHHHHHHH-------TCCGGGSEEEECSSCCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHh---hhcceEEEeCCCCHHHHHHHHHHHHHHc-------CCCCCceEEEECCCCCHHHHHHHHHHhcC
Confidence 34555552 2344 3457899999999999999999999998 8876 8 799999999999999999 89
Q ss_pred CcccEEeeCCcccccC-CCCccceEEEEeEECCccccccCCCCCCCC--CCccceeEeec
Q 026913 79 HEVDAFGIGTYLVTCY-AQAALGCVFKLVEINKQPRIKLSEDVSKVS--IPCKKRSYRLY 135 (231)
Q Consensus 79 ~~id~fGvGT~l~~~~-~~p~l~~vyKlv~~~g~p~~K~S~~~~K~t--~PG~K~v~R~~ 135 (231)
+++|+|||||+|+|+. ++|++++|||||++||+|++|+|++++|.| .||.|++||.+
T Consensus 337 ~~~d~FGVGT~L~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t~~~pg~~~~~r~~ 396 (408)
T 1yir_A 337 RINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKHV 396 (408)
T ss_dssp TSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSCC-------CHHHHHHHHH
T ss_pred CCceEEEeChhhccCCCCCCccceEEEEEEECCeeeEecCCCCCCcCCCCccceeeEeee
Confidence 9999999999999998 899999999999999999999999999999 99999999975
No 7
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=6.2e-32 Score=255.35 Aligned_cols=109 Identities=20% Similarity=0.239 Sum_probs=102.2
Q ss_pred CccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC--CeEEEEeCCCCHHHHHHHHh--cCCcccEEeeCCccccc---
Q 026913 21 KAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTC--- 93 (231)
Q Consensus 21 ~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~--~v~I~~S~~Lde~~i~~l~~--~g~~id~fGvGT~l~~~--- 93 (231)
++.|||+|||||+++++++|++||++ |++ +++||+||||||++|.+|.+ +|+++|+|||||+|+|+
T Consensus 307 ~~~GVR~DSGDp~~~~~~~r~~ld~~-------G~~p~~~~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGVGT~L~~d~~~ 379 (449)
T 1ybe_A 307 DWTGFRPDSAPPIEGGEKIIEWWRKM-------GRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAG 379 (449)
T ss_dssp GSSEECCCSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHCCCTT
T ss_pred ccceEecCCCCHHHHHHHHHHHHHHc-------CCCcCceEEEEeCCCCHHHHHHHHHHhcCCCceEEEeChhhccCccc
Confidence 47899999999999999999999998 887 89999999999999999998 89999999999999994
Q ss_pred ------CCCCccceEEEEeEECCccccccCCCCCCCCCCccceeEeecCC
Q 026913 94 ------YAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGK 137 (231)
Q Consensus 94 ------~~~p~l~~vyKlv~~~g~p~~K~S~~~~K~t~PG~K~v~R~~~~ 137 (231)
.++|++++|||||++||+|++|+|++++|.| ||+|+|+|++..
T Consensus 380 ~~~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t-~g~k~v~r~~~~ 428 (449)
T 1ybe_A 380 CAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKAT-GDPAEVERYLKF 428 (449)
T ss_dssp CCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCB-SCHHHHHHHHHH
T ss_pred ccccccCCCCccceEEEEeeecCcceeecCCCCCCCC-CCHHHHHHHHhh
Confidence 4689999999999999999999999999999 999999999753
No 8
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=99.97 E-value=1.6e-31 Score=249.77 Aligned_cols=111 Identities=30% Similarity=0.330 Sum_probs=102.8
Q ss_pred chHHHHHHH-HHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC--CeEEEEeCCCCHHHHHHHHh--cC
Q 026913 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QG 78 (231)
Q Consensus 4 Gv~naI~va-~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~--~v~I~~S~~Lde~~i~~l~~--~g 78 (231)
|++|||+++ .++ |.++.|||+|||||.++++++|++||++ |++ +++||+||||||++|.+|.+ +|
T Consensus 262 ~~~~~l~~~~~~~---~~~~~GVR~DSGD~~~~~~k~r~~ld~~-------G~~p~~~~Ii~SdgLde~~i~~l~~~~~~ 331 (407)
T 3os4_A 262 TMDAFLRDFDLAF---ANRYQGLRHDSGDPIEWGEKAIAHYEKL-------GIDPMKKVLVFSDNLDLEKALFLYRHFYQ 331 (407)
T ss_dssp CHHHHHHHCCHHH---HHHSCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECSSCCHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHh---cccCeEEEcCCCChHHHHHHHHHHHHHC-------CcCcCceEEEECCCCCHHHHHHHHHHhcC
Confidence 689999997 444 4467899999999999999999999997 876 68999999999999999987 88
Q ss_pred CcccEEeeCCcccccCC-CCccceEEEEeEECCccccccCCCCCCCC
Q 026913 79 HEVDAFGIGTYLVTCYA-QAALGCVFKLVEINKQPRIKLSEDVSKVS 124 (231)
Q Consensus 79 ~~id~fGvGT~l~~~~~-~p~l~~vyKlv~~~g~p~~K~S~~~~K~t 124 (231)
+++|+|||||+|+|+.+ +|++++|||||++||+|++|+|++++|.|
T Consensus 332 ~~~d~fGVGT~L~~~~~~~~~l~~V~Klv~~~G~P~~KlSd~~~K~~ 378 (407)
T 3os4_A 332 RIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTI 378 (407)
T ss_dssp TSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSSTTCCC
T ss_pred CCCcEEeechheeeCCCCCCCcceEEEEEEECCcceeEecCCCcccc
Confidence 99999999999999998 99999999999999999999999999987
No 9
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=99.97 E-value=5.5e-31 Score=248.21 Aligned_cols=112 Identities=24% Similarity=0.279 Sum_probs=102.1
Q ss_pred chHHHHHHH-HHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC-CeE-EEEeCCCCHHHHHHHHh--cC
Q 026913 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE-KMS-ITASNDLNEETLDALNK--QG 78 (231)
Q Consensus 4 Gv~naI~va-~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~-~v~-I~~S~~Lde~~i~~l~~--~g 78 (231)
|++||++++ .++ |.++.|||+|||||.++++++|++||++ |++ ++| ||+||||||++|.+|.+ +|
T Consensus 272 ~~~~fl~~~~~~~---~~~~~GVR~DSGDp~~~~~k~r~~ld~~-------G~~~~~K~Iv~SdgLde~~i~~L~~~~~~ 341 (446)
T 4hl7_A 272 TIDAFLNDFNRHL---ANAYDGVRHDSGCPFRWGDKMIAHYQQL-------GIDPTTKLFIFSDGLDFDQALELCEYFAG 341 (446)
T ss_dssp CHHHHHHHCCHHH---HHHSCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECSSCCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHh---cccccEEecCCCChHHHHHHHHHHHHHc-------CCCCCCcEEEEcCCCCHHHHHHHHHHhcC
Confidence 678999886 333 5568899999999999999999999998 885 785 99999999999999975 78
Q ss_pred CcccEEeeCCcccccCC---------CCccceEEEEeEECCccccccCCCCCCCCC
Q 026913 79 HEVDAFGIGTYLVTCYA---------QAALGCVFKLVEINKQPRIKLSEDVSKVSI 125 (231)
Q Consensus 79 ~~id~fGvGT~l~~~~~---------~p~l~~vyKlv~~~g~p~~K~S~~~~K~t~ 125 (231)
+++|+|||||+|+|+.+ +|++++|||||++||+|++|+|+++||.|.
T Consensus 342 ~~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~VyKLve~~G~P~~KlSd~~gK~t~ 397 (446)
T 4hl7_A 342 RVKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKISDQPEKAMC 397 (446)
T ss_dssp TSEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEEEEEEETTEECCBCCSSGGGCBC
T ss_pred CCCcEEEeccceeccCcccccccccCCCCceeEEEEEEECCcceeEecCCcccccC
Confidence 99999999999999988 899999999999999999999999999983
No 10
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=99.96 E-value=3.9e-31 Score=249.47 Aligned_cols=120 Identities=27% Similarity=0.364 Sum_probs=106.0
Q ss_pred chHHHHHHH-HHHHhcCCCccEEeeCCCChHHHHHHHHHHH-HHHhHhhCCCCCCC-eE-EEEeCCCCHHHHHHHH---h
Q 026913 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFF-RTIEKEFGVPDFEK-MS-ITASNDLNEETLDALN---K 76 (231)
Q Consensus 4 Gv~naI~va-~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~l-d~~~~~l~~~g~~~-v~-I~~S~~Lde~~i~~l~---~ 76 (231)
|..+|++.+ ++| +.++.|||+|||||+++++++|++| |++ |+++ +| ||+||||||++|.+|. +
T Consensus 286 d~~~fL~~~~~~l---~~~~~GVR~DSGDp~~~~~~~r~~l~d~~-------G~~~~~k~Ii~SdgLd~~~i~~l~~~~~ 355 (441)
T 1vlp_A 286 GTDDFLKSFRPPY---SDAYVGVRQDSGDPVEYTKKISHHYHDVL-------KLPKFSKIICYSDSLNVEKAITYSHAAK 355 (441)
T ss_dssp CHHHHHTTCCTTH---HHHSCEEEECSSCHHHHHHHHHHHHHTTS-------CCCTTSSEEEECSSCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHh---hhcceEEEcCCCCHHHHHHHHHHHHHHHc-------CCCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 456666654 344 3457899999999999999999999 887 8877 89 9999999999999999 6
Q ss_pred cCCcccEEeeCCcccccC--------CCCccceEEEEeEECCccccccCCCCCCCCCCccceeEee
Q 026913 77 QGHEVDAFGIGTYLVTCY--------AQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRL 134 (231)
Q Consensus 77 ~g~~id~fGvGT~l~~~~--------~~p~l~~vyKlv~~~g~p~~K~S~~~~K~t~PG~K~v~R~ 134 (231)
+|+++|+|||||+|+|+. ++|+++||||||++||+|++|+|++++|.|.| .+.|.|+
T Consensus 356 ~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~l~~V~Klv~~nG~p~~KlS~~~~K~t~~-~~~~~~~ 420 (441)
T 1vlp_A 356 ENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNMGD-PATVKRV 420 (441)
T ss_dssp HTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEEEEEEETTEECCBCCSSTTCCBSC-HHHHHHH
T ss_pred cCCceEEEEeCchheecccccccccCCCCCcceEEEEEEECCeeeEEecCCCCCccCC-HHHHHHH
Confidence 899999999999999965 68999999999999999999999999999999 6666665
No 11
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=99.16 E-value=3.9e-11 Score=107.88 Aligned_cols=81 Identities=21% Similarity=0.263 Sum_probs=63.7
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
..+|++|++++.++.+ +++.++. ++++++|.+|||+|++.|.++.+.| +|.||||+.+ + ++|++++
T Consensus 218 aD~I~ld~~~~~~l~~-~v~~l~~--------~~~~~~I~ASGGIt~~ni~~~~~aG--aD~i~vGs~i-~--~a~~~D~ 283 (299)
T 2jbm_A 218 ADLVLLDNFKPEELHP-TATVLKA--------QFPSVAVEASGGITLDNLPQFCGPH--IDVISMGMLT-Q--AAPALDF 283 (299)
T ss_dssp CSEEEEESCCHHHHHH-HHHHHHH--------HCTTSEEEEESSCCTTTHHHHCCTT--CCEEECTHHH-H--SCCCCCE
T ss_pred CCEEEECCCCHHHHHH-HHHHhhc--------cCCCeeEEEECCCCHHHHHHHHHCC--CCEEEEChhh-c--CCCCcce
Confidence 6799999999988764 4456765 5789999999999999999999999 5999999954 3 3599999
Q ss_pred EEEEeEECCcccccc
Q 026913 102 VFKLVEINKQPRIKL 116 (231)
Q Consensus 102 vyKlv~~~g~p~~K~ 116 (231)
+||+++++|+|++|+
T Consensus 284 s~~i~~~~g~p~~K~ 298 (299)
T 2jbm_A 284 SLKLFAKEVAPVPKI 298 (299)
T ss_dssp EEEEEEEC-------
T ss_pred EEEEEEeCCcccccc
Confidence 999999999999996
No 12
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.75 E-value=6.1e-09 Score=93.37 Aligned_cols=75 Identities=16% Similarity=0.129 Sum_probs=43.2
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
..+||+|++++.++. +++++++..+ +|+++++|.+|||+|++.|.++.+.| +|.||||+.+ .++|++|+
T Consensus 220 aD~I~ld~~~~~~l~-~~v~~l~~~~-----~g~~~v~I~ASGGIt~~ni~~~~~~G--vD~i~vGs~i---~~a~~~D~ 288 (294)
T 3c2e_A 220 ADVIMLDNFKGDGLK-MCAQSLKNKW-----NGKKHFLLECSGGLNLDNLEEYLCDD--IDIYSTSSIH---QGTPVIDF 288 (294)
T ss_dssp CSEEECCC---------------------------CCEEEEECCCCC------CCCS--CSEEECGGGT---SSCCCCCE
T ss_pred CCEEEECCCCHHHHH-HHHHHhcccc-----cCCCCeEEEEECCCCHHHHHHHHHcC--CCEEEEechh---cCCCCCce
Confidence 679999999987774 4455665420 16889999999999999999999999 5999999986 33799999
Q ss_pred EEEEeE
Q 026913 102 VFKLVE 107 (231)
Q Consensus 102 vyKlv~ 107 (231)
+||++|
T Consensus 289 s~~i~~ 294 (294)
T 3c2e_A 289 SLKLAH 294 (294)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999985
No 13
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.47 E-value=3.1e-07 Score=82.59 Aligned_cols=69 Identities=25% Similarity=0.296 Sum_probs=57.5
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
..+||+|++++..+.+.++.. ..+++|.+|||+|++.|.++.+.| +|.|+||+-. .+.|++|+
T Consensus 230 aD~I~LDn~~~~~l~~av~~i------------~~~v~ieaSGGI~~~~i~~~a~tG--VD~isvG~lt---~sa~~lD~ 292 (298)
T 3gnn_A 230 ARSVLLDNFTLDMMRDAVRVT------------EGRAVLEVSGGVNFDTVRAIAETG--VDRISIGALT---KDVRATDY 292 (298)
T ss_dssp CEEEEEESCCHHHHHHHHHHH------------TTSEEEEEESSCSTTTHHHHHHTT--CSEEECGGGG---TSCCCCCE
T ss_pred CCEEEECCCCHHHHHHHHHHh------------CCCCeEEEEcCCCHHHHHHHHHcC--CCEEEECCee---cCCCccce
Confidence 679999999998776555543 157999999999999999999988 6999999933 34799999
Q ss_pred EEEEeE
Q 026913 102 VFKLVE 107 (231)
Q Consensus 102 vyKlv~ 107 (231)
.||++|
T Consensus 293 sl~i~e 298 (298)
T 3gnn_A 293 SMRIVE 298 (298)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 999986
No 14
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.42 E-value=2.8e-07 Score=81.58 Aligned_cols=70 Identities=19% Similarity=0.248 Sum_probs=59.7
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
..+|++|++++.++.+. ++.++. ++++++|.+|||+|++.|.++.+.| +|.||||+.+.. +|++|+
T Consensus 203 aD~I~ld~~~~~~l~~~-v~~l~~--------~~~~~~i~AsGGI~~~ni~~~~~aG--aD~i~vGs~i~~---a~~~D~ 268 (273)
T 2b7n_A 203 ADIVMCDNLSVLETKEI-AAYRDA--------HYPFVLLEASGNISLESINAYAKSG--VDAISVGALIHQ---ATFIDM 268 (273)
T ss_dssp CSEEEEETCCHHHHHHH-HHHHHH--------HCTTCEEEEESSCCTTTHHHHHTTT--CSEEECTHHHHT---CCCCCE
T ss_pred CCEEEECCCCHHHHHHH-HHHhhc--------cCCCcEEEEECCCCHHHHHHHHHcC--CcEEEEcHHhcC---CCCCce
Confidence 57999999999877544 446765 5788999999999999999999999 599999998653 789999
Q ss_pred EEEE
Q 026913 102 VFKL 105 (231)
Q Consensus 102 vyKl 105 (231)
.+|+
T Consensus 269 s~~i 272 (273)
T 2b7n_A 269 HMKM 272 (273)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
No 15
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.41 E-value=4.6e-07 Score=82.15 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=56.7
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
..+||+|++++..+.+.+ +.++ .+++|.+|||+|++.|.++.+.| +|.|+||+ ++. +.|++|+
T Consensus 252 aD~I~LDn~~~~~l~~av-~~l~-----------~~v~ieaSGGIt~~~I~~~a~tG--VD~isvGa-lt~--sa~~lD~ 314 (320)
T 3paj_A 252 ADIIMLDNFSLEMMREAV-KINA-----------GRAALENSGNITLDNLKECAETG--VDYISVGA-LTK--HLKALDL 314 (320)
T ss_dssp CSEEEEESCCHHHHHHHH-HHHT-----------TSSEEEEESSCCHHHHHHHHTTT--CSEEECTH-HHH--SBCCCCE
T ss_pred CCEEEECCCCHHHHHHHH-HHhC-----------CCCeEEEECCCCHHHHHHHHHcC--CCEEEECc-eec--CCCccee
Confidence 579999999997774433 3332 47899999999999999999988 69999998 333 4799999
Q ss_pred EEEEeE
Q 026913 102 VFKLVE 107 (231)
Q Consensus 102 vyKlv~ 107 (231)
.||++|
T Consensus 315 sl~i~~ 320 (320)
T 3paj_A 315 SMRFKS 320 (320)
T ss_dssp EEEECC
T ss_pred EEEeeC
Confidence 999975
No 16
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.98 E-value=6.7e-06 Score=73.71 Aligned_cols=67 Identities=22% Similarity=0.291 Sum_probs=54.7
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
..+|++|++++.++.+.++ +++ .+++|.+|||+|++.|.++.+.| +|.||||+ +++ ++|++|+
T Consensus 229 aD~I~ld~~~~e~l~~~v~-~~~-----------~~~~I~ASGGIt~~~i~~~a~~G--vD~isvGs-li~--~a~~~D~ 291 (296)
T 1qap_A 229 ADIIMLDNFNTDQMREAVK-RVN-----------GQARLEVSGNVTAETLREFAETG--VDFISVGA-LTK--HVRALDL 291 (296)
T ss_dssp CSEEEESSCCHHHHHHHHH-TTC-----------TTCCEEECCCSCHHHHHHHHHTT--CSEEECSH-HHH--EEECCCE
T ss_pred CCEEEECCCCHHHHHHHHH-HhC-----------CCCeEEEECCCCHHHHHHHHHcC--CCEEEEeH-HHc--CCCCCce
Confidence 6799999999988765433 221 36899999999999999999999 59999999 443 3789999
Q ss_pred EEEE
Q 026913 102 VFKL 105 (231)
Q Consensus 102 vyKl 105 (231)
.+|+
T Consensus 292 sl~i 295 (296)
T 1qap_A 292 SMRF 295 (296)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
No 17
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.29 E-value=0.00075 Score=60.06 Aligned_cols=70 Identities=17% Similarity=0.130 Sum_probs=55.3
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
...|++|.-++. ..+++++.++.. +++++|.+|||++++.|.++.+.| +|.|+||+-. ++ .|++|+
T Consensus 215 aD~I~LDn~~~~-~~~~~v~~l~~~--------~~~v~ieaSGGIt~~~i~~~a~tG--VD~isvG~l~-~~--a~~~D~ 280 (284)
T 1qpo_A 215 PELILLDNFAVW-QTQTAVQRRDSR--------APTVMLESSGGLSLQTAATYAETG--VDYLAVGALT-HS--VRVLDI 280 (284)
T ss_dssp CSEEEEETCCHH-HHHHHHHHHHHH--------CTTCEEEEESSCCTTTHHHHHHTT--CSEEECGGGT-SS--BCCCCE
T ss_pred CCEEEECCCCHH-HHHHHHHHhhcc--------CCCeEEEEECCCCHHHHHHHHhcC--CCEEEECHHH-cC--CCCcce
Confidence 458888887763 345666666653 367899999999999999999999 8999999944 32 688999
Q ss_pred EEEE
Q 026913 102 VFKL 105 (231)
Q Consensus 102 vyKl 105 (231)
.+|+
T Consensus 281 sl~i 284 (284)
T 1qpo_A 281 GLDM 284 (284)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9874
No 18
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.12 E-value=0.00093 Score=59.64 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=52.8
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
...|++|..++..+ ++..... . .+++|.+|||++++.|.++.+.| +|.++||+-. ++ .|++|+
T Consensus 219 aD~I~LDn~~~~~l----~~av~~~-------~-~~v~ieaSGGIt~~~i~~~a~tG--VD~IsvGalt-~s--a~~lD~ 281 (287)
T 3tqv_A 219 ADIVMLDNFSGEDI----DIAVSIA-------R-GKVALEVSGNIDRNSIVAIAKTG--VDFISVGAIT-KH--IKAIDL 281 (287)
T ss_dssp CSEEEEESCCHHHH----HHHHHHH-------T-TTCEEEEESSCCTTTHHHHHTTT--CSEEECSHHH-HS--BCCCCE
T ss_pred CCEEEEcCCCHHHH----HHHHHhh-------c-CCceEEEECCCCHHHHHHHHHcC--CCEEEEChhh-cC--Ccccce
Confidence 67999999997554 3333332 1 47899999999999999999988 7999997544 33 689999
Q ss_pred EEEEe
Q 026913 102 VFKLV 106 (231)
Q Consensus 102 vyKlv 106 (231)
.+|+.
T Consensus 282 sl~i~ 286 (287)
T 3tqv_A 282 SLQVQ 286 (287)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 99863
No 19
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.92 E-value=0.0017 Score=57.82 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=55.9
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
...|.+|.-++..+ +++++.++.. +++++|.+|||++++.|.++.+.| +|.++||.-... +|++|+
T Consensus 214 aD~I~LDn~~~e~l-~~av~~l~~~--------~~~v~ieASGGIt~eni~~~a~tG--VD~IsvGslt~s---a~~~D~ 279 (285)
T 1o4u_A 214 ADIVMLDNLSPEEV-KDISRRIKDI--------NPNVIVEVSGGITEENVSLYDFET--VDVISSSRLTLQ---EVFVDL 279 (285)
T ss_dssp CSEEEEESCCHHHH-HHHHHHHHHH--------CTTSEEEEEECCCTTTGGGGCCTT--CCEEEEGGGTSS---CCCCCE
T ss_pred CCEEEECCCCHHHH-HHHHHHhhcc--------CCCceEEEECCCCHHHHHHHHHcC--CCEEEEeHHHcC---CCCcce
Confidence 45788888776544 4556666653 257899999999999999999888 799999985544 689999
Q ss_pred EEEEe
Q 026913 102 VFKLV 106 (231)
Q Consensus 102 vyKlv 106 (231)
.+|++
T Consensus 280 sl~i~ 284 (285)
T 1o4u_A 280 SLEIQ 284 (285)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99875
No 20
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.58 E-value=0.0052 Score=55.13 Aligned_cols=67 Identities=18% Similarity=0.217 Sum_probs=52.1
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 22 ~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
...|++|.-++..+ ++..... + .+++|.+|||++++.|.++.+.| +|.+++| .|+.+ .|++|+
T Consensus 228 aDiImLDn~s~~~l----~~av~~~----~----~~v~leaSGGIt~~~i~~~A~tG--VD~IsvG-alths--a~~lDi 290 (300)
T 3l0g_A 228 VDMILLDNMSISEI----KKAVDIV----N----GKSVLEVSGCVNIRNVRNIALTG--VDYISIG-CITNS--FQNKDI 290 (300)
T ss_dssp CSEEEEESCCHHHH----HHHHHHH----T----TSSEEEEESSCCTTTHHHHHTTT--CSEEECG-GGTSS--CCCCCE
T ss_pred CCEEEECCCCHHHH----HHHHHhh----c----CceEEEEECCCCHHHHHHHHHcC--CCEEEeC-ccccC--CCccee
Confidence 56899999887433 3333332 1 37899999999999999999998 7999999 44443 689999
Q ss_pred EEEE
Q 026913 102 VFKL 105 (231)
Q Consensus 102 vyKl 105 (231)
.+|+
T Consensus 291 sl~i 294 (300)
T 3l0g_A 291 GLDI 294 (300)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 21
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.13 E-value=0.024 Score=50.31 Aligned_cols=46 Identities=24% Similarity=0.367 Sum_probs=39.6
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCCCCccceEEEEeE
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVE 107 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~vyKlv~ 107 (231)
++.|++|||++++.|.++.+.| +|.++||.-+ ++ .|++|+.+|+++
T Consensus 240 ~ipi~AsGGIt~eni~~~a~tG--vD~IsVgs~~-~~--a~~~D~sl~i~~ 285 (286)
T 1x1o_A 240 RVPLEASGNMTLERAKAAAEAG--VDYVSVGALT-HS--AKALDLSLLVVR 285 (286)
T ss_dssp SSCEEEESSCCHHHHHHHHHHT--CSEEECTHHH-HS--CCCCCEEEEEEE
T ss_pred CCeEEEEcCCCHHHHHHHHHcC--CCEEEEcHHH-cC--CCceeeEEEEec
Confidence 5799999999999999999999 7999997744 32 689999999864
No 22
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.33 E-value=0.4 Score=39.14 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=32.8
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
+++.|+++||++.+.+.++.+.| .|++.||+.+..+.
T Consensus 158 ~~~~i~~~gGI~~~~~~~~~~~G--ad~vvvGsai~~~~ 194 (211)
T 3f4w_A 158 RKARIAVAGGISSQTVKDYALLG--PDVVIVGSAITHAA 194 (211)
T ss_dssp SSCEEEEESSCCTTTHHHHHTTC--CSEEEECHHHHTCS
T ss_pred CCCcEEEECCCCHHHHHHHHHcC--CCEEEECHHHcCCC
Confidence 46799999999999999999988 68999999998754
No 23
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=90.12 E-value=1.4 Score=35.18 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=49.4
Q ss_pred HhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCccc-EEeeCCcc
Q 026913 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVD-AFGIGTYL 90 (231)
Q Consensus 16 ~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id-~fGvGT~l 90 (231)
++.+..+.|+=.-++.-....+++.+.|++. |.++++|++.|-+-.+....+.+.|+ | .|+.||.+
T Consensus 66 ~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~-------g~~~i~v~vGG~~~~~~~~~l~~~G~--d~v~~~~~~~ 132 (161)
T 2yxb_A 66 VQEDVDVIGVSILNGAHLHLMKRLMAKLREL-------GADDIPVVLGGTIPIPDLEPLRSLGI--REIFLPGTSL 132 (161)
T ss_dssp HHTTCSEEEEEESSSCHHHHHHHHHHHHHHT-------TCTTSCEEEEECCCHHHHHHHHHTTC--CEEECTTCCH
T ss_pred HhcCCCEEEEEeechhhHHHHHHHHHHHHhc-------CCCCCEEEEeCCCchhcHHHHHHCCC--cEEECCCCCH
Confidence 4445566666665566667777778888876 77789999999988888877888885 5 49999864
No 24
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=86.47 E-value=4.2 Score=36.70 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=35.0
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~ 98 (231)
++.|+++||+ +...|.+....| .|+.+|||.|+.+...|.
T Consensus 207 ~iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~~~~t~Esp~ 247 (361)
T 3khj_A 207 GIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPG 247 (361)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTTTBTTSSC
T ss_pred CCeEEEECCCCCHHHHHHHHHcC--CCEEEEChhhhcCCcCCc
Confidence 4689999999 899999999889 589999999999877764
No 25
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=85.62 E-value=0.47 Score=38.84 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.1
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||++.+.+.++.+.| ++++.|||.+..+
T Consensus 148 ~ipvia~GGI~~~~i~~~~~~G--a~gv~vGsai~~~ 182 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWIDAG--CAGAGLGSDLYRA 182 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHHHT--CSEEEECTTTCCT
T ss_pred CCeEEEeCCCCHHHHHHHHHcC--CCEEEEChHHhCC
Confidence 5899999999999999999988 6899999999874
No 26
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.59 E-value=4.4 Score=36.15 Aligned_cols=75 Identities=20% Similarity=0.202 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEe---eC--------CCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIR---LD--------SGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLD 72 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVR---lD--------SGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~~i~ 72 (231)
+..++.++++|.+.|..+.-|- .+ .|....+++++|+.+ ++.|++.|++ +.+.+.
T Consensus 238 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~t~e~a~ 304 (349)
T 3hgj_A 238 LEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-------------GLRTGAVGLITTPEQAE 304 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-------------CceEEEECCCCCHHHHH
Confidence 4567888888888876654442 11 111122333333321 4579999998 799999
Q ss_pred HHHhcCCcccEEeeCCccccc
Q 026913 73 ALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 73 ~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.+.|. .|..++|+.++..
T Consensus 305 ~~l~~G~-aD~V~iGR~~lan 324 (349)
T 3hgj_A 305 TLLQAGS-ADLVLLGRVLLRD 324 (349)
T ss_dssp HHHHTTS-CSEEEESTHHHHC
T ss_pred HHHHCCC-ceEEEecHHHHhC
Confidence 9998874 6899999999874
No 27
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=85.41 E-value=1.5 Score=37.24 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeC-Cccccc
Q 026913 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIG-TYLVTC 93 (231)
Q Consensus 34 ~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvG-T~l~~~ 93 (231)
.-.+++|++.++. |+ ++.|.+-||++++++..+.+.| .|.|-+| +.+..+
T Consensus 152 ~kI~~lr~~~~~~-------~~-~~~I~VdGGI~~~~~~~~~~aG--Ad~~V~G~saif~~ 202 (231)
T 3ctl_A 152 DKLAELKAWRERE-------GL-EYEIEVDGSCNQATYEKLMAAG--ADVFIVGTSGLFNH 202 (231)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESCCSTTTHHHHHHHT--CCEEEECTTTTGGG
T ss_pred HHHHHHHHHHhcc-------CC-CceEEEECCcCHHHHHHHHHcC--CCEEEEccHHHhCC
Confidence 3345677777764 55 4689999999999999999999 6899999 888764
No 28
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=83.94 E-value=3.9 Score=36.74 Aligned_cols=75 Identities=13% Similarity=0.193 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEee-----C----CC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIRL-----D----SG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLD 72 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVRl-----D----SG--Dl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~~i~ 72 (231)
+..++.++++|.+.|..+.-|-- + +| ....+++++|+.+ ++.|++.|++ +.+.+.
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~GgI~s~e~a~ 311 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-------------KLPVTSAWGFGTPQLAE 311 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------TCCEEECSSTTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-------------CCcEEEeCCCCCHHHHH
Confidence 56778888999888866543321 1 11 2233444444432 3479999999 699999
Q ss_pred HHHhcCCcccEEeeCCccccc
Q 026913 73 ALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 73 ~l~~~g~~id~fGvGT~l~~~ 93 (231)
++++.|. .|..++|+.++..
T Consensus 312 ~~l~~G~-aD~V~iGR~~lan 331 (363)
T 3l5l_A 312 AALQANQ-LDLVSVGRAHLAD 331 (363)
T ss_dssp HHHHTTS-CSEEECCHHHHHC
T ss_pred HHHHCCC-ccEEEecHHHHhC
Confidence 9998874 6899999999874
No 29
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.64 E-value=0.51 Score=38.38 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=32.4
Q ss_pred CCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 55 ~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++++.|+++||++.+.+.++.+.| .|+++|||.+..
T Consensus 148 ~~~~pvia~GGI~~~~~~~~~~~G--a~~v~vGs~i~~ 183 (205)
T 1wa3_A 148 FPNVKFVPTGGVNLDNVCEWFKAG--VLAVGVGSALVK 183 (205)
T ss_dssp CTTCEEEEBSSCCTTTHHHHHHHT--CSCEEECHHHHC
T ss_pred CCCCcEEEcCCCCHHHHHHHHHCC--CCEEEECccccC
Confidence 447899999999999999999999 689999999876
No 30
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=83.31 E-value=0.97 Score=38.42 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.2
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|.+.||++++++..+.+.| .|.|=+|+.+..+.
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~aG--Ad~~V~GsaIf~~~ 208 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISASHG--ANIIVAGTSIFNAE 208 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHHHT--CCEEEESHHHHTCS
T ss_pred CCeEEEECCCCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 6799999999999999999999 68899999988743
No 31
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.17 E-value=4.8 Score=35.65 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEe---e-----CCCC--hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIR---L-----DSGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVR---l-----DSGD--l~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~~i~~ 73 (231)
...++.++++|.+.|..+.-|= . .++. ...+++++++.+ ++.|+++|++ +.+.+.+
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~s~~~a~~ 294 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-------------DMATGAVGMITDGSMAEE 294 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-------------CCCEEEECCCCCHHHHHH
Confidence 5678899999999887654431 0 1121 123333333322 4589999999 8999999
Q ss_pred HHhcCCcccEEeeCCccccc
Q 026913 74 LNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 74 l~~~g~~id~fGvGT~l~~~ 93 (231)
+.+.|. +|..++|+.++..
T Consensus 295 ~l~~G~-aD~V~iGR~~i~n 313 (338)
T 1z41_A 295 ILQNGR-ADLIFIGRELLRD 313 (338)
T ss_dssp HHHTTS-CSEEEECHHHHHC
T ss_pred HHHcCC-ceEEeecHHHHhC
Confidence 998874 6899999999874
No 32
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=82.91 E-value=5.8 Score=36.00 Aligned_cols=43 Identities=7% Similarity=0.092 Sum_probs=36.4
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCccce
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~ 101 (231)
++.||++||+ +...|.+....| .++.+|||.|+.+...|.-.+
T Consensus 211 ~iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~f~~t~Esp~~~~ 254 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAPGEVI 254 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSSCCE
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCEEEEChHhhcCCCCCchhh
Confidence 4689999999 899999999999 489999999999887765433
No 33
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=80.84 E-value=2.1 Score=35.41 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccCC
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~~ 95 (231)
.+++|+.+.+. + .++.|++.||++++.+.++.+.| .|++.||+.++.+.+
T Consensus 166 i~~l~~~~~~~-------~-~~~pi~v~GGI~~~n~~~~~~aG--ad~vvvgSaI~~a~d 215 (230)
T 1rpx_A 166 ISDLRKICAER-------G-LNPWIEVDGGVGPKNAYKVIEAG--ANALVAGSAVFGAPD 215 (230)
T ss_dssp HHHHHHHHHHH-------T-CCCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSSC
T ss_pred HHHHHHHHHhc-------C-CCceEEEECCCCHHHHHHHHHcC--CCEEEEChhhhCCCC
Confidence 34556655543 3 25689999999999999998888 589999999987543
No 34
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=80.14 E-value=6.5 Score=36.20 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=36.1
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALG 100 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~ 100 (231)
++.||++||+ +...|.+....| .++..|||.|+.+...|.-.
T Consensus 246 ~IPVIA~GGI~~~~di~kalalG--Ad~V~vGt~f~~t~Es~~~~ 288 (400)
T 3ffs_A 246 GIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPGEK 288 (400)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTT--CSEEEECGGGTTBTTSSCCE
T ss_pred CCCEEecCCCCCHHHHHHHHHcC--CCEEEEChHHhcCCCCCchh
Confidence 5789999999 799999999999 57999999999988777543
No 35
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=79.09 E-value=1.3 Score=36.27 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=30.7
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||+ +.+.+.++.+.| .|++.||+.|..
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~G--ad~v~vG~al~~ 209 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDLG--VHCSVVGGAITR 209 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEecCCCCHHHHHHHHHcC--CCEEEEChHHcC
Confidence 4689999999 999999999998 789999998765
No 36
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=79.07 E-value=5 Score=35.76 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHhcCCCccEEe---eC-----CCC--hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIR---LD-----SGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVR---lD-----SGD--l~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~~i~~ 73 (231)
+..++.++++|.+.|..+.-|- .+ ++. ...+++++++.+ ++.|+++|++ +.+.+.+
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-------------~iPVi~~GgI~s~e~a~~ 294 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-------------DIPTGAVGLITSGWQAEE 294 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-------------TCCEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-------------CCcEEeeCCCCCHHHHHH
Confidence 5678889999999887654431 11 121 123333333322 3579999998 6999999
Q ss_pred HHhcCCcccEEeeCCccccc
Q 026913 74 LNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 74 l~~~g~~id~fGvGT~l~~~ 93 (231)
+++.|. .|..++|+.++..
T Consensus 295 ~L~~G~-aD~V~iGR~~lan 313 (340)
T 3gr7_A 295 ILQNGR-ADLVFLGRELLRN 313 (340)
T ss_dssp HHHTTS-CSEEEECHHHHHC
T ss_pred HHHCCC-eeEEEecHHHHhC
Confidence 998874 6899999999874
No 37
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=77.99 E-value=3.8 Score=35.14 Aligned_cols=36 Identities=31% Similarity=0.273 Sum_probs=31.8
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccCC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~~ 95 (231)
++.++++||++ .+.+..+.+ | +++|-||+.|+...+
T Consensus 208 ~~~vIAegGI~s~~dv~~l~~-G--a~gvlVGsAl~~~~d 244 (254)
T 1vc4_A 208 GGVLVAESGYSRKEELKALEG-L--FDAVLIGTSLMRAPD 244 (254)
T ss_dssp CSEEEEESCCCSHHHHHTTTT-T--CSEEEECHHHHTSSC
T ss_pred CCeEEEEcCCCCHHHHHHHHc-C--CCEEEEeHHHcCCCC
Confidence 56899999998 999999999 8 789999999988543
No 38
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=77.61 E-value=2.2 Score=36.75 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
-.+++|+++++. |+ ++.|.+.||++++++..+.+.| .|.|=+|+.+..+.
T Consensus 181 KI~~lr~~~~~~-------~~-~~~I~VDGGI~~~ti~~~~~aG--AD~~V~GSaIf~a~ 230 (246)
T 3inp_A 181 KAKEISKWISST-------DR-DILLEIDGGVNPYNIAEIAVCG--VNAFVAGSAIFNSD 230 (246)
T ss_dssp HHHHHHHHHHHH-------TS-CCEEEEESSCCTTTHHHHHTTT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHhc-------CC-CeeEEEECCcCHHHHHHHHHcC--CCEEEEehHHhCCC
Confidence 345667777664 43 4689999999999999999999 57888999887654
No 39
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=77.35 E-value=1 Score=37.47 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=32.2
Q ss_pred CCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 55 ~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++++.+++.||++.+.+.++.+.| .++.+||+.+..
T Consensus 149 ~~~ipvvaiGGI~~~n~~~~l~aG--a~~vavgSai~~ 184 (207)
T 2yw3_A 149 FPEVRFLPTGGIKEEHLPHYAALP--NLLAVGGSWLLQ 184 (207)
T ss_dssp CTTCEEEEBSSCCGGGHHHHHTCS--SBSCEEESGGGS
T ss_pred CCCCcEEEeCCCCHHHHHHHHhCC--CcEEEEehhhhC
Confidence 457899999999999999999988 578899999876
No 40
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=77.24 E-value=3.1 Score=40.11 Aligned_cols=93 Identities=19% Similarity=0.228 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEee
Q 026913 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGI 86 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGv 86 (231)
...+-+.+|-+.|..+.-|..--|.-...... .+.+.+. ++++.|++.|=-+.+..+.|.+.|+...--||
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~-i~~ik~~--------~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEF-IKWIKQT--------YPKIDVIAGNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHH-HHHHHHH--------CTTSEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHH-HHHHHhh--------CCcceEEeccccCHHHHHHHHHcCCCEEeecC
Confidence 44555777888887765554444874444333 3333332 57899999999999999999999987766777
Q ss_pred C------CcccccCCCCccceEEEEeEE
Q 026913 87 G------TYLVTCYAQAALGCVFKLVEI 108 (231)
Q Consensus 87 G------T~l~~~~~~p~l~~vyKlv~~ 108 (231)
| |+.++..+.|-+..+|++.+.
T Consensus 352 GpGSiCtTr~v~GvG~PQ~tAi~~~a~~ 379 (556)
T 4af0_A 352 GSGSICITQEVMAVGRPQGTAVYAVAEF 379 (556)
T ss_dssp SCSTTBCCTTTCCSCCCHHHHHHHHHHH
T ss_pred CCCcccccccccCCCCcHHHHHHHHHHH
Confidence 7 445556678888888876543
No 41
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=76.80 E-value=1.1 Score=37.00 Aligned_cols=36 Identities=11% Similarity=0.298 Sum_probs=32.0
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|++.||++.+.+.++.+.| .+++.||+.+..+.
T Consensus 164 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~~ 199 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQAG--ADGIAVMSGIFSSA 199 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEhHHhhCCC
Confidence 5689999999999999999988 68999999998753
No 42
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=76.70 E-value=2 Score=37.44 Aligned_cols=36 Identities=28% Similarity=0.228 Sum_probs=32.6
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.++++||++ .+.+..+.+.| +++|.||+.|+.+.
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~G--adgvlVGsal~~a~ 249 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGAG--ADAVLVGEGLVTSG 249 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHTCS
T ss_pred cCEEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 57899999998 99999999999 78999999998854
No 43
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=76.70 E-value=6 Score=35.85 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=30.8
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++|+++.+.+.++.++|. .|..++|..++..
T Consensus 299 ~iPvi~~Ggi~~~~a~~~l~~g~-aD~V~igR~~l~~ 334 (377)
T 2r14_A 299 KGGLIYCGNYDAGRAQARLDDNT-ADAVAFGRPFIAN 334 (377)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCCEEEECCCCHHHHHHHHHCCC-ceEEeecHHHHhC
Confidence 35799999999999999998875 6899999998874
No 44
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=76.65 E-value=1.5 Score=36.28 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.5
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||++ .+.+.++.+.| +|++.||+.|..
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~~G--ad~v~vGsal~~ 220 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKINDLG--VAGIVVGGAITR 220 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTC--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEEchHHhC
Confidence 46899999998 99999999998 689999998865
No 45
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=76.32 E-value=8.6 Score=34.56 Aligned_cols=75 Identities=17% Similarity=0.193 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEe---eCCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCC
Q 026913 5 VPNFCAVALALNDLGYKAVGIR---LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVR---lDSG--Dl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~ 79 (231)
+..++.++++|.+.|..+..|= .+.+ ....+++++ .++ -++.|++.|+++.+.+.++.+.|.
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i----~~~---------~~iPvi~~Ggi~~~~a~~~l~~g~ 315 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRAL----REA---------YQGVLIYAGRYNAEKAEQAINDGL 315 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHH----HHH---------CCSEEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHH----HHH---------CCCcEEEeCCCCHHHHHHHHHCCC
Confidence 3467777888887776543331 1111 112222222 222 135799999999999999998874
Q ss_pred cccEEeeCCccccc
Q 026913 80 EVDAFGIGTYLVTC 93 (231)
Q Consensus 80 ~id~fGvGT~l~~~ 93 (231)
.|..+||+.++..
T Consensus 316 -aD~V~igR~~i~~ 328 (365)
T 2gou_A 316 -ADMIGFGRPFIAN 328 (365)
T ss_dssp -CSEEECCHHHHHC
T ss_pred -cceehhcHHHHhC
Confidence 6899999999874
No 46
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=76.31 E-value=2.2 Score=35.84 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 34 ~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
...+++|++.++. |+ ++.|.+-||++++.+.++.+.| .|++=||+.+..+.
T Consensus 158 ~~i~~lr~~~~~~-------~~-~~~I~v~GGI~~~~~~~~~~aG--ad~vvvGSai~~a~ 208 (230)
T 1tqj_A 158 PKIRALRQMCDER-------GL-DPWIEVDGGLKPNNTWQVLEAG--ANAIVAGSAVFNAP 208 (230)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESSCCTTTTHHHHHHT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHHhc-------CC-CCcEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 4445677777664 53 4699999999999999999988 68999999998753
No 47
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=76.22 E-value=4.5 Score=34.10 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHh-cCCcccEEeeCCccccc
Q 026913 54 DFEKMSITASNDLNEETLDALNK-QGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~I~~S~~Lde~~i~~l~~-~g~~id~fGvGT~l~~~ 93 (231)
.++++.+++.||++++.+.++.+ .| +++.| |+.|+..
T Consensus 163 ~~~~ipvvaiGGI~~~N~~~~l~~~G--a~~v~-gSai~~~ 200 (225)
T 1mxs_A 163 PFGDIRFCPTGGVNPANVRNYMALPN--VMCVG-TTWMLDS 200 (225)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHHSTT--BCCEE-ECTTSCH
T ss_pred hCCCCeEEEECCCCHHHHHHHHhccC--CEEEE-EchhcCc
Confidence 46689999999999999999998 57 68888 9999763
No 48
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=76.09 E-value=3.7 Score=34.99 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=31.2
Q ss_pred CeEEEEeCCCCHHHHHHHHh--cCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~--~g~~id~fGvGT~l~~~ 93 (231)
++.|.+-||++++.+..+.+ .| +|.|=+|+.+..+
T Consensus 187 ~~~I~vdGGI~~~~~~~~~~~~aG--ad~~VvGSaIf~~ 223 (237)
T 3cu2_A 187 EKLINIDGSMTLELAKYFKQGTHQ--IDWLVSGSALFSG 223 (237)
T ss_dssp GCEEEEESSCCHHHHHHHHHSSSC--CCCEEECGGGGSS
T ss_pred CceEEEECCcCHHHHHHHHHhCCC--CcEEEEeeHHhCC
Confidence 46899999999999999999 88 6888899999874
No 49
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=75.82 E-value=3.5 Score=34.79 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=30.4
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.++++||+ +.+.+.++.+.| .+++-|||.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsai~~ 215 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEHG--AWAVTVGSAITR 215 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHhcC
Confidence 5689999999 699999999999 689999999875
No 50
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=75.81 E-value=8.9 Score=34.66 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=34.3
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccCCCCc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~~~p~ 98 (231)
++.|+++||+. ...+.++...| .|+.+|||.++.+...|.
T Consensus 256 ~ipVia~GGI~~~~d~~~ala~G--Ad~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 256 NICIIADGGIRFSGDVVKAIAAG--ADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp SCEEEEESCCCSHHHHHHHHHHT--CSEEEECHHHHTBTTSSS
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCHHhhCHHHhcCCCCCc
Confidence 68999999995 88888888889 689999999998776654
No 51
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=75.11 E-value=3.6 Score=35.26 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=31.2
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||+ |.+.+.++.+.| .|+.+|||.+..+
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~~G--Ad~V~vg~~~l~~ 276 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYMAG--ASAVAVGTANFAD 276 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHHHT--CSEEEECTHHHHC
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHHcC
Confidence 5789999999 899999998888 6899999999874
No 52
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=74.99 E-value=10 Score=34.27 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=30.0
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 58 v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
+.|++.|+++.+.+.++++.|. .|..++|..++..
T Consensus 288 iPvi~~Ggit~e~a~~~l~~G~-aD~V~iGR~~lad 322 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDAGQ-ADAVAWGKLFIAN 322 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhC
Confidence 4688999999999999998874 6899999998884
No 53
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=74.73 E-value=3.7 Score=33.52 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=30.3
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||++ .+.+.++.+.| .|++.||+.+...
T Consensus 198 ~~pvia~GGi~~~~~~~~~~~~G--a~~v~vgsal~~~ 233 (253)
T 1h5y_A 198 RIPVIASGGAGRVEHFYEAAAAG--ADAVLAASLFHFR 233 (253)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CcHHHHHHHHHcC
Confidence 56899999998 58999998878 6899999999874
No 54
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=74.36 E-value=11 Score=33.88 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEee---CC--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCC
Q 026913 5 VPNFCAVALALNDLGYKAVGIRL---DS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVRl---DS--GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~ 79 (231)
+..++.++++|++.|..+..|=. .+ +....+.++ +.++ -++.|++.|+++.+.+.++.+.|.
T Consensus 250 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~----v~~~---------~~iPvi~~Ggit~~~a~~~l~~g~ 316 (364)
T 1vyr_A 250 EADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQK----VRER---------FHGVIIGAGAYTAEKAEDLIGKGL 316 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHH----HHHH---------CCSEEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHH----HHHH---------CCCCEEEECCcCHHHHHHHHHCCC
Confidence 34577778888877765543311 10 111122222 2222 245799999999999999998875
Q ss_pred cccEEeeCCccccc
Q 026913 80 EVDAFGIGTYLVTC 93 (231)
Q Consensus 80 ~id~fGvGT~l~~~ 93 (231)
+|..+||..++..
T Consensus 317 -aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 317 -IDAVAFGRDYIAN 329 (364)
T ss_dssp -CSEEEESHHHHHC
T ss_pred -ccEEEECHHHHhC
Confidence 6899999998874
No 55
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=74.04 E-value=4.9 Score=33.88 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=30.3
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.++++||+ +.+.+.++.+.| .|++.|||.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsal~~ 215 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRYG--AWAVTVGSAITR 215 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEehHhcC
Confidence 5689999999 699999999999 689999999875
No 56
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=73.92 E-value=3.4 Score=33.58 Aligned_cols=36 Identities=22% Similarity=0.458 Sum_probs=31.4
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
+..|+++||++++.+.++.+.| .|++-||+.+..+.
T Consensus 170 ~~~i~v~GGI~~~~~~~~~~~G--ad~vvvGsai~~~~ 205 (220)
T 2fli_A 170 SFDIEVDGGVDNKTIRACYEAG--ANVFVAGSYLFKAS 205 (220)
T ss_dssp CCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CceEEEECcCCHHHHHHHHHcC--CCEEEEChHHhCCC
Confidence 4689999999999999998888 58899999998753
No 57
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=73.19 E-value=14 Score=32.92 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHhcCCCccEEe----------eCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIR----------LDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVR----------lDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~~i~~ 73 (231)
+..++.++++|.+. ..+.-|- ...|-...+++++|+.+ ++.|+++|++ +.+.+.+
T Consensus 229 ~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~t~e~Ae~ 294 (343)
T 3kru_A 229 IDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-------------NIKTSAVGLITTQELAEE 294 (343)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------TCEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc-------------CcccceeeeeeHHHHHHH
Confidence 57788889888876 4443331 01122233444444332 3589999998 5899999
Q ss_pred HHhcCCcccEEeeCCcccccC
Q 026913 74 LNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 74 l~~~g~~id~fGvGT~l~~~~ 94 (231)
+.+.|. .|..++|..++...
T Consensus 295 ~l~~G~-aD~V~iGR~~lanP 314 (343)
T 3kru_A 295 ILSNER-ADLVALGRELLRNP 314 (343)
T ss_dssp HHHTTS-CSEEEESHHHHHCT
T ss_pred HHhchh-hHHHHHHHHHhcCC
Confidence 988874 68999999998743
No 58
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=72.88 E-value=3.1 Score=34.61 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=31.3
Q ss_pred CeEEEEeCCCCH-HHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNE-ETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde-~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||++. +.+.++.+.| .|++.|||.+...
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~~G--ad~vivGsai~~~ 226 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLKEG--ANGVVVGSALVKI 226 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCEEEEeecCCHHHHHHHHHcC--CCEEEEcHHHHhh
Confidence 568999999998 9999998888 6899999999874
No 59
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=72.81 E-value=12 Score=33.71 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=29.9
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 58 v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
+.|++.|+++.+.+.++++.|. .|..++|..++..
T Consensus 280 iPvi~~Ggit~e~a~~~l~~g~-aD~V~iGR~~lan 314 (362)
T 4ab4_A 280 GPYIVNERFDKASANAALASGK-ADAVAFGVPFIAN 314 (362)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhC
Confidence 4688999999999999998874 6899999998874
No 60
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=72.07 E-value=1.5 Score=35.44 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=31.3
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|+++||++.+.+.++.+.| .+++.||+.+....
T Consensus 162 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~~ 197 (215)
T 1xi3_A 162 KIPVVAIGGINKDNAREVLKTG--VDGIAVISAVMGAE 197 (215)
T ss_dssp SSCEEEESSCCTTTHHHHHTTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEhHHHhCCC
Confidence 5689999999999999998877 68999999998743
No 61
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=69.99 E-value=15 Score=33.87 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=35.3
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~ 98 (231)
++.|+++||+ +...+.+....| .|+.++|+.++.+...|.
T Consensus 340 ~ipvia~GGI~~~~di~kala~G--Ad~V~iGr~~l~~~e~~~ 380 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALAAG--AESVMVGSIFAGTEEAPG 380 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSSS
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHhcCCcCCc
Confidence 6789999999 899999999999 689999999998776664
No 62
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=69.47 E-value=22 Score=33.12 Aligned_cols=39 Identities=13% Similarity=0.153 Sum_probs=33.0
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCC
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p 97 (231)
++.|+++||+ +...+.+....| .|+.+||+.+..+...|
T Consensus 358 ~ipVia~GGI~~~~di~kala~G--Ad~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALALG--ASTVMMGSLLAATTEAP 397 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTSTTSS
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCeeeECHHHHcCCcCC
Confidence 4689999999 578888888889 68999999998876554
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=69.37 E-value=20 Score=33.39 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=34.9
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~ 98 (231)
++.||++||+ +...|.+....|+ ++-.|||.|+.+...|.
T Consensus 332 ~iPVIa~GGI~~~~di~kal~~GA--d~V~vGs~~~~~~Esp~ 372 (490)
T 4avf_A 332 GVPLIADGGIRFSGDLAKAMVAGA--YCVMMGSMFAGTEEAPG 372 (490)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHTC--SEEEECTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCC--CeeeecHHHhcCCCCCC
Confidence 4789999999 8999999998894 89999999999877664
No 64
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=68.30 E-value=15 Score=32.96 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=36.7
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCccceEE
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVF 103 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l~~vy 103 (231)
++.|+++||+ +...|.+....| .++.+||+.+..+...|.-.+.|
T Consensus 277 ~ipvia~GGI~~~~dv~kalalG--A~~V~iG~~~l~~~es~~~~~~~ 322 (393)
T 2qr6_A 277 YVHIIADGSIENSGDVVKAIACG--ADAVVLGSPLARAEEAAGKGYFW 322 (393)
T ss_dssp CCEEEECSSCCSHHHHHHHHHHT--CSEEEECGGGGGSTTCTTTTEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCCCCCCceEEE
Confidence 4899999999 688888888889 58999999999877666544444
No 65
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=67.27 E-value=4.5 Score=34.87 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=29.0
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 59 ~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
.|+++||+ +.+.+.++.+.| +|++.||+.+..+
T Consensus 211 i~~a~GGI~~~e~i~~~~~aG--adgvvvGsai~~~ 244 (297)
T 2zbt_A 211 VNFAAGGIATPADAALMMHLG--MDGVFVGSGIFKS 244 (297)
T ss_dssp CEEBCSSCCSHHHHHHHHHTT--CSEEEECGGGGGS
T ss_pred EEEeeCCCCCHHHHHHHHHcC--CCEEEEchHHhCC
Confidence 34599999 999999999988 6899999999874
No 66
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=66.72 E-value=1.7 Score=35.49 Aligned_cols=35 Identities=9% Similarity=0.203 Sum_probs=30.9
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||++.+.+.++.+.| .+++.||+.+...
T Consensus 172 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 206 (227)
T 2tps_A 172 SIPIVGIGGITIDNAAPVIQAG--ADGVSMISAISQA 206 (227)
T ss_dssp CCCEEEESSCCTTTSHHHHHTT--CSEEEESHHHHTS
T ss_pred CCCEEEEcCCCHHHHHHHHHcC--CCEEEEhHHhhcC
Confidence 3689999999999999998877 6899999999874
No 67
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=66.41 E-value=2.3 Score=35.35 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=32.0
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|++.||++++.+.++.+.| +|.+=||+.+..+.
T Consensus 173 ~~pi~v~GGI~~~ni~~~~~aG--aD~vvvGsai~~~~ 208 (228)
T 1h1y_A 173 SLDIEVDGGLGPSTIDVAASAG--ANCIVAGSSIFGAA 208 (228)
T ss_dssp TSEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 6789999999999999999888 68999999998753
No 68
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=65.63 E-value=4 Score=34.87 Aligned_cols=37 Identities=11% Similarity=0.204 Sum_probs=31.0
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 54 g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.|+++.+++.||++++.+.++.+.|+ .+-++||.|+.
T Consensus 171 p~p~ip~~ptGGI~~~n~~~~l~aGa--~~~vgGs~l~~ 207 (232)
T 4e38_A 171 PYGDIRLMPTGGITPSNIDNYLAIPQ--VLACGGTWMVD 207 (232)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTSTT--BCCEEECGGGC
T ss_pred HhcCCCeeeEcCCCHHHHHHHHHCCC--eEEEECchhcC
Confidence 57899999999999999999999885 34556887764
No 69
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=64.93 E-value=2.8 Score=33.78 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=31.5
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|++.||++++.+.++.+.| .|.+.||+.+..+.
T Consensus 158 ~~pi~v~GGI~~~~~~~~~~aG--ad~vvvGsaI~~~~ 193 (207)
T 3ajx_A 158 RVPFSVAGGVKVATIPAVQKAG--AEVAVAGGAIYGAA 193 (207)
T ss_dssp TSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEeeeccCCC
Confidence 4579999999999999999999 58999999998754
No 70
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=63.56 E-value=19 Score=32.02 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=30.3
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 56 ~~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
+++.|+++||+ +.+.+.++.+ | .|+..||+.+..+
T Consensus 196 ~~iPVianGgI~s~eda~~~l~-G--aD~V~iGRa~l~~ 231 (350)
T 3b0p_A 196 PQLTFVTNGGIRSLEEALFHLK-R--VDGVMLGRAVYED 231 (350)
T ss_dssp TTSEEEEESSCCSHHHHHHHHT-T--SSEEEECHHHHHC
T ss_pred CCCeEEEECCcCCHHHHHHHHh-C--CCEEEECHHHHhC
Confidence 36799999998 8899999887 7 7999999998874
No 71
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.46 E-value=2.6 Score=34.61 Aligned_cols=37 Identities=16% Similarity=0.141 Sum_probs=32.0
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
.++.+++.||++++.+.++.+.| .++++||+.+....
T Consensus 143 ~~iPviaiGGI~~~nv~~~~~~G--a~gVav~s~i~~~~ 179 (210)
T 3ceu_A 143 IDSKVMALGGINEDNLLEIKDFG--FGGAVVLGDLWNKF 179 (210)
T ss_dssp SSTTEEEESSCCTTTHHHHHHTT--CSEEEESHHHHTTC
T ss_pred CCCCEEEECCCCHHHHHHHHHhC--CCEEEEhHHhHcCC
Confidence 36789999999999999999888 57999999997743
No 72
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=62.85 E-value=17 Score=31.30 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=29.8
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||+ +.+.+.++...| .|..+|||.++.
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~~G--Ad~V~vg~~~l~ 276 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLLCG--ATMLQIGTALHK 276 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHHHh
Confidence 6899999999 788888887888 689999999985
No 73
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=62.73 E-value=5.2 Score=35.70 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=34.0
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCC
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p 97 (231)
++.|+++||+ |.+.+.++...| .|+..|||.+..+.+.+
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~~G--Ad~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLAAG--ADAAQLGTAFLATDESG 247 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTSTTCC
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCcccC
Confidence 5679999999 999999999988 68999999999876544
No 74
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=62.55 E-value=5.8 Score=33.36 Aligned_cols=38 Identities=13% Similarity=0.313 Sum_probs=31.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
.++++.+++.||++++.+.++.+.|. +++.| |+.|+..
T Consensus 154 ~~~~ipvvaiGGI~~~N~~~~l~agg-a~~v~-gS~i~~~ 191 (224)
T 1vhc_A 154 PYAQLQIMPTGGIGLHNIRDYLAIPN-IVACG-GSWFVEK 191 (224)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHTSTT-BCCEE-ECGGGCH
T ss_pred hCCCCeEEEECCcCHHHHHHHHhcCC-CEEEE-EchhcCc
Confidence 45688999999999999999998732 67788 8888763
No 75
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=62.41 E-value=27 Score=31.51 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=28.6
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|++.|+++.+.+.++.+.|. +|..++|..++..
T Consensus 307 ~iPvi~~G~it~~~a~~~l~~g~-aD~V~igR~~l~~ 342 (379)
T 3aty_A 307 SGVKISNLRYDFEEADQQIREGK-VDAVAFGAKFIAN 342 (379)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCcEEEECCCCHHHHHHHHHcCC-CeEEEecHHHHhC
Confidence 35788888898888888888764 6888888888774
No 76
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=62.03 E-value=5.7 Score=33.10 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=31.7
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
.++++.+++.||++++.+.++.+.|. +++.| |+.|+..
T Consensus 153 ~~~~ipvvaiGGI~~~n~~~~l~agg-~~~v~-gS~i~~~ 190 (214)
T 1wbh_A 153 PFSQVRFCPTGGISPANYRDYLALKS-VLCIG-GSWLVPA 190 (214)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTSTT-BSCEE-EGGGSCH
T ss_pred hCCCCeEEEECCCCHHHHHHHHhcCC-CeEEE-eccccCh
Confidence 46689999999999999999998832 67888 8888763
No 77
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=61.98 E-value=9.3 Score=31.90 Aligned_cols=35 Identities=20% Similarity=0.064 Sum_probs=29.0
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||+. .+.+.++.+.| +|++-||+.+...
T Consensus 200 ~ipvia~GGI~~~ed~~~~~~~G--adgv~vgsal~~~ 235 (266)
T 2w6r_A 200 TLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFR 235 (266)
T ss_dssp CSCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTC--
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CHHHHccHHHHcC
Confidence 56899999999 59999998878 6899999999874
No 78
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=60.64 E-value=21 Score=27.26 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=40.1
Q ss_pred CCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-----CHH-HHHHHHhcCCcccEEeeCCccc
Q 026913 19 GYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-----NEE-TLDALNKQGHEVDAFGIGTYLV 91 (231)
Q Consensus 19 g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-----de~-~i~~l~~~g~~id~fGvGT~l~ 91 (231)
+..+.|+=.=++.-....+++.+.|++. |+++++|++.|.. |.. .-..+.+.|+ -..|+.||...
T Consensus 54 ~~d~v~lS~~~~~~~~~~~~~i~~l~~~-------g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~-d~~~~~g~~~~ 124 (137)
T 1ccw_A 54 KADAILVSSLYGQGEIDCKGLRQKCDEA-------GLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY-DRVYAPGTPPE 124 (137)
T ss_dssp TCSEEEEEECSSTHHHHHTTHHHHHHHT-------TCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC-SEECCTTCCHH
T ss_pred CCCEEEEEecCcCcHHHHHHHHHHHHhc-------CCCCCEEEEECCCcCchHhhhhhHHHHHHCCC-CEEECCCCCHH
Confidence 3444455444455555566677777776 7777899998864 111 2344666786 34678888653
No 79
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=60.19 E-value=2.8 Score=35.83 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=32.3
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|++-||++.+.+.++.+.| .+++.||+.+..+.
T Consensus 191 ~iPvvAiGGI~~~ni~~~~~aG--a~gvav~sai~~a~ 226 (243)
T 3o63_A 191 DKPWFAIGGINAQRLPAVLDAG--ARRIVVVRAITSAD 226 (243)
T ss_dssp CCCEEEESSCCTTTHHHHHHTT--CCCEEESHHHHTCS
T ss_pred CCCEEEecCCCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 6789999999999999999999 68999999998754
No 80
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=59.37 E-value=42 Score=31.45 Aligned_cols=40 Identities=8% Similarity=0.148 Sum_probs=33.9
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~ 98 (231)
++.||++||+ +...|.+....| .++-.||+.+..+...|.
T Consensus 359 ~iPVIa~GGI~~~~di~kala~G--A~~V~vGs~~~~~~es~g 399 (511)
T 3usb_A 359 GIPVIADGGIKYSGDMVKALAAG--AHVVMLGSMFAGVAESPG 399 (511)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHhC--chhheecHHHhcCccCch
Confidence 4689999999 899999988889 578899999988776654
No 81
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=59.18 E-value=14 Score=35.28 Aligned_cols=76 Identities=11% Similarity=0.294 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHhcCCCccEEee---CC-----------CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIRL---DS-----------GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVRl---DS-----------GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~ 69 (231)
...++.++++|++.|..+..|-. +. +....+.++ +.++ -++.|++.|++ +.+
T Consensus 227 ~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~~---------~~iPvi~~Ggi~~~~ 293 (671)
T 1ps9_A 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRK----LKGH---------VSLPLVTTNRINDPQ 293 (671)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHH----HTTS---------CSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHH----HHHh---------cCceEEEeCCCCCHH
Confidence 46788899999998877655421 10 111222222 2221 25679999999 899
Q ss_pred HHHHHHhcCCcccEEeeCCcccccC
Q 026913 70 TLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 70 ~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
.+.++.+.|. .|..++|..+..+.
T Consensus 294 ~a~~~l~~g~-aD~V~~gR~~l~~P 317 (671)
T 1ps9_A 294 VADDILSRGD-ADMVSMARPFLADA 317 (671)
T ss_dssp HHHHHHHTTS-CSEEEESTHHHHCT
T ss_pred HHHHHHHcCC-CCEEEeCHHHHhCc
Confidence 9999998874 68999999998753
No 82
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=58.79 E-value=16 Score=31.36 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=30.0
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
+++.|+++||+. .+.+.++...| .|..+|||.++.
T Consensus 243 ~~ipvi~~GGI~~~~da~~~l~~G--Ad~V~ig~~~l~ 278 (314)
T 2e6f_A 243 PDKLVFGCGGVYSGEDAFLHILAG--ASMVQVGTALQE 278 (314)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHHT--CSSEEECHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHcC--CCEEEEchhhHh
Confidence 478999999995 88888887888 589999999985
No 83
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=57.97 E-value=34 Score=28.54 Aligned_cols=36 Identities=8% Similarity=0.212 Sum_probs=27.0
Q ss_pred CeEEEEeCCCC---HHH----HHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLN---EET----LDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Ld---e~~----i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|+++||++ .+. +..+.+.|+ +++.||+.+..+.
T Consensus 202 ~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga--~gv~vg~~i~~~~ 244 (273)
T 2qjg_A 202 PAPVVVAGGPKTNTDEEFLQMIKDAMEAGA--AGVAVGRNIFQHD 244 (273)
T ss_dssp SSCEEEECCSCCSSHHHHHHHHHHHHHHTC--SEEECCHHHHTSS
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHcCC--cEEEeeHHhhCCC
Confidence 46899999998 444 666667784 7999999998754
No 84
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=57.66 E-value=6.2 Score=36.95 Aligned_cols=91 Identities=18% Similarity=0.229 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCC-eEEEEeCCCCHHHHHHHHhcCCcccEE
Q 026913 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-MSITASNDLNEETLDALNKQGHEVDAF 84 (231)
Q Consensus 6 ~naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~-v~I~~S~~Lde~~i~~l~~~g~~id~f 84 (231)
.++++.+..|.+.|.++..|-.+.|+...+...+ +.+.+. +++ +.|++.+-.+.+.+..+.+.|+....-
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~--------~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V 311 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREK--------YGDKVKVGAGNIVDGEGFRYLADAGADFIKI 311 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHH--------HGGGSCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHh--------CCCCceEeeccccCHHHHHHHHHhCCCeEEe
Confidence 4456667777777888777767778865533333 444443 234 789999999999999999999865444
Q ss_pred eeCC------cccccCCCCccceEEEE
Q 026913 85 GIGT------YLVTCYAQAALGCVFKL 105 (231)
Q Consensus 85 GvGT------~l~~~~~~p~l~~vyKl 105 (231)
|+|. ..++..+.|.+..+..+
T Consensus 312 g~~~g~~~~~r~~~~~g~p~~~~l~~v 338 (503)
T 1me8_A 312 GIGGGSICITREQKGIGRGQATAVIDV 338 (503)
T ss_dssp CSSCSTTCCSTTTTCCCCCHHHHHHHH
T ss_pred cccCCcCcccccccCCCCchHHHHHHH
Confidence 7743 22333345655444443
No 85
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=57.10 E-value=7 Score=33.11 Aligned_cols=37 Identities=8% Similarity=0.199 Sum_probs=29.6
Q ss_pred CCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 54 g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.++++++++.||+|++.+.++.+.|+ .+.+.|+.|+.
T Consensus 156 p~p~i~~~ptGGI~~~N~~~~l~aGa--~~~vgGs~l~~ 192 (217)
T 3lab_A 156 PFPDIQFCPTGGISKDNYKEYLGLPN--VICAGGSWLTE 192 (217)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHHSTT--BCCEEESGGGC
T ss_pred hhcCceEEEeCCCCHHHHHHHHHCCC--EEEEEChhhcC
Confidence 57899999999999999999999985 23344666653
No 86
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=56.84 E-value=38 Score=30.81 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=30.3
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 58 v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
+.|+++|+++.+.+.++++.|. .|..++|..++..
T Consensus 320 iPvi~~G~i~~~~a~~~l~~g~-aD~V~igR~~l~d 354 (402)
T 2hsa_B 320 GTFICSGGYTRELGIEAVAQGD-ADLVSYGRLFISN 354 (402)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCEEEeCCCCHHHHHHHHHCCC-CceeeecHHHHhC
Confidence 4689999999999999998875 6899999998874
No 87
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=56.73 E-value=21 Score=27.65 Aligned_cols=37 Identities=16% Similarity=0.375 Sum_probs=26.1
Q ss_pred CCCCeEEEEeCCCCHHH------HHHHHhcCCcccEEeeCCcc
Q 026913 54 DFEKMSITASNDLNEET------LDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 54 g~~~v~I~~S~~Lde~~------i~~l~~~g~~id~fGvGT~l 90 (231)
+.+++-|++|+|.+... +..+.+.|..+.++|||...
T Consensus 121 ~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 121 HVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp TSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 45678999999976544 55666678888899999764
No 88
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=56.21 E-value=8.9 Score=33.41 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=32.3
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCC
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~ 95 (231)
++.+|+.+|+ +.+.+..+.+.| +++|-||+.|+...+
T Consensus 220 ~~~vIaesGI~t~edv~~l~~~G--a~gvLVG~almr~~d 257 (272)
T 3tsm_A 220 DRLLVGESGIFTHEDCLRLEKSG--IGTFLIGESLMRQHD 257 (272)
T ss_dssp TSEEEEESSCCSHHHHHHHHTTT--CCEEEECHHHHTSSC
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHcCCcC
Confidence 5688888888 999999999999 689999999998643
No 89
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=55.37 E-value=17 Score=29.87 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=30.5
Q ss_pred CeEEEEeCCCCH-HHHHHHHhc---CCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNE-ETLDALNKQ---GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde-~~i~~l~~~---g~~id~fGvGT~l~~~ 93 (231)
++.|+++||++. +.+.++.+. | +|++-||+.+...
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~G--adgv~vG~al~~~ 228 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAG--VEGAIVGKALYAK 228 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGT--EEEEEECHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCC--CceeeeeHHHHcC
Confidence 568999999995 999999987 7 7899999998764
No 90
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=54.22 E-value=15 Score=30.80 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=31.0
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|++.+|++ .+.+.++.+.| .|++-|||.++..
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~~G--AdgvvVGSai~~~ 236 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQWG--ADGVIIGSAMVRQ 236 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcC--CCEEEEChHHHhH
Confidence 56899999999 99999999988 5889999998874
No 91
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=53.78 E-value=3.2 Score=34.21 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=31.0
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|++.||++++.+.++.+.| .|++.||+.++.+
T Consensus 166 ~~pi~v~GGI~~~~~~~~~~aG--Ad~vvvGsaI~~a 200 (218)
T 3jr2_A 166 GIELSITGGIVPEDIYLFEGIK--TKTFIAGRALAGA 200 (218)
T ss_dssp TCEEEEESSCCGGGGGGGTTSC--EEEEEESGGGSHH
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEchhhcCC
Confidence 5689999999999999999888 6899999998764
No 92
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=53.77 E-value=8.7 Score=33.55 Aligned_cols=38 Identities=26% Similarity=0.334 Sum_probs=32.5
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCC
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQ 96 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~ 96 (231)
++.|+++||+ |.+.+.++...| .|+..|||.+..+...
T Consensus 172 ~iPviaaGGI~~~~~v~~al~~G--AdgV~vGs~~~~~~e~ 210 (328)
T 2gjl_A 172 RVPIIASGGFADGRGLVAALALG--ADAINMGTRFLATREC 210 (328)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTSSSS
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCccc
Confidence 5689999999 788998888888 6899999999987654
No 93
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=52.97 E-value=31 Score=30.79 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=29.2
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||+ +...+.++...| .|+.+||+.+..
T Consensus 280 ~ipvia~GGI~~~~D~~k~l~~G--AdaV~iGr~~l~ 314 (370)
T 1gox_A 280 RIPVFLDGGVRRGTDVFKALALG--AAGVFIGRPVVF 314 (370)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHcC--CCEEeecHHHHH
Confidence 6899999999 677888888889 689999998865
No 94
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=50.73 E-value=12 Score=33.47 Aligned_cols=39 Identities=15% Similarity=0.331 Sum_probs=28.8
Q ss_pred CCCCeEEEEeCCCCH-----------HHHHHHHhcCCcccEEeeCCccccc
Q 026913 54 DFEKMSITASNDLNE-----------ETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 54 g~~~v~I~~S~~Lde-----------~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
+-++++++.. +-|. +.|+.|.++|.|||+.|+=+|+...
T Consensus 170 ~dP~a~L~~N-DYn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~ 219 (335)
T 4f8x_A 170 GANDVKLYYN-DYGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVG 219 (335)
T ss_dssp TCTTSEEEEE-ESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT
T ss_pred CCCCcEEEEe-cccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCC
Confidence 4578888874 4332 2456677789999999999999764
No 95
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=50.57 E-value=15 Score=33.21 Aligned_cols=35 Identities=9% Similarity=0.138 Sum_probs=29.7
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 58 v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
+.|+++|+++.+.+.++++.|. +|..++|..++..
T Consensus 302 iPvi~~G~i~~~~a~~~l~~g~-aD~V~~gR~~l~~ 336 (376)
T 1icp_A 302 GTFIVAGGYDREDGNRALIEDR-ADLVAYGRLFISN 336 (376)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCEEEeCCCCHHHHHHHHHCCC-CcEEeecHHHHhC
Confidence 4689999999999999988764 6899999988874
No 96
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=50.25 E-value=11 Score=32.70 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=29.1
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 59 ~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
-++++||+ +.+.+.++.+.| .|++.||+.+..+.
T Consensus 211 i~~a~GGI~~~~d~~~~~~~G--adgV~vGsai~~~~ 245 (305)
T 2nv1_A 211 VNFAAGGVATPADAALMMQLG--ADGVFVGSGIFKSD 245 (305)
T ss_dssp CEEBCSCCCSHHHHHHHHHTT--CSCEEECGGGGGSS
T ss_pred EEEeccCCCCHHHHHHHHHcC--CCEEEEcHHHHcCC
Confidence 34499999 999999999888 68999999998754
No 97
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=48.77 E-value=24 Score=30.37 Aligned_cols=53 Identities=17% Similarity=0.153 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
...+|+.|.+. ++-.--.+++|+..|+.+++-+.+|..+ ..+|++-||+.-..
T Consensus 186 h~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 238 (250)
T 1yya_A 186 HQAIRKALSER---YGEAFASRVRILYGGSVNPKNFADLLSM-PNVDGGLVGGASLE 238 (250)
T ss_dssp HHHHHHHHHHH---HCHHHHTTCEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGSS
T ss_pred HHHHHHHHHHh---cCccccCceeEEEcCCCCHHHHHHHHcC-CCCCeeEeeHHHhC
Confidence 33466666553 2110014689999999999999999976 24899999987654
No 98
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=48.74 E-value=31 Score=28.84 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=28.2
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCcccEEeeCCcc
Q 026913 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~I~~S~~Lde------~~i~~l~~~g~~id~fGvGT~l 90 (231)
++.+++-|++++|-+- +.+..+.+.|..+-++|||...
T Consensus 123 ~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~ 166 (266)
T 4hqo_A 123 EKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGI 166 (266)
T ss_dssp TTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSC
T ss_pred CCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCccc
Confidence 4456789999998742 3455666789889999999843
No 99
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=48.66 E-value=34 Score=26.94 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=26.9
Q ss_pred CCCCeEEEEeCCCC-----HHHHHHHHhcCCcccEEeeCCc
Q 026913 54 DFEKMSITASNDLN-----EETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~I~~S~~Ld-----e~~i~~l~~~g~~id~fGvGT~ 89 (231)
+...+-|++|+|.+ .+.+..+.+.|..+.++|||+.
T Consensus 110 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~ 150 (218)
T 3ibs_A 110 GVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMP 150 (218)
T ss_dssp SCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCT
T ss_pred CCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCC
Confidence 45668899999976 3445556667888889999975
No 100
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=48.20 E-value=41 Score=30.81 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHHh-cCCCccEEee-----------CCCC--hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHH
Q 026913 5 VPNFCAVALALND-LGYKAVGIRL-----------DSGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (231)
Q Consensus 5 v~naI~va~~l~~-~g~~~~gVRl-----------DSGD--l~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~L-de~ 69 (231)
+..++.++++|.+ .|..+.-|=- .+|. ...+++++|+.+. .++.|++.|++ +.+
T Consensus 263 ~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~-----------~~iPVI~~GgI~t~e 331 (419)
T 3l5a_A 263 IDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA-----------GRIPLIASGGINSPE 331 (419)
T ss_dssp HHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT-----------TSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC-----------CCCeEEEECCCCCHH
Confidence 5678889999998 8765432210 0121 1234444444431 24679999996 899
Q ss_pred HHHHHHhcCCcccEEeeCCccccc
Q 026913 70 TLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 70 ~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
.+.++++. +|..++|..++.+
T Consensus 332 ~Ae~~L~~---aDlVaiGR~~Ian 352 (419)
T 3l5a_A 332 SALDALQH---ADMVGMSSPFVTE 352 (419)
T ss_dssp HHHHHGGG---CSEEEESTHHHHC
T ss_pred HHHHHHHh---CCcHHHHHHHHHC
Confidence 99999887 7999999999874
No 101
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=47.39 E-value=74 Score=29.63 Aligned_cols=41 Identities=7% Similarity=0.132 Sum_probs=34.2
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCcc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAAL 99 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l 99 (231)
++.||++||+ +...|.+....| .|+-.|||.|+.+...|.-
T Consensus 334 ~iPVIa~GGI~~~~di~kala~G--Ad~V~iGs~f~~t~Espg~ 375 (496)
T 4fxs_A 334 GIPVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAPGE 375 (496)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSSC
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCeEEecHHHhcCCCCCcc
Confidence 4689999999 688899888889 4788999999987776644
No 102
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=46.87 E-value=24 Score=29.71 Aligned_cols=37 Identities=3% Similarity=-0.011 Sum_probs=29.1
Q ss_pred CCeEEEEeCCCCHHHHHHHH-hcCCcccEEeeCCcccccC
Q 026913 56 EKMSITASNDLNEETLDALN-KQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~-~~g~~id~fGvGT~l~~~~ 94 (231)
++++|+..+|++.....++. +.| +|+|-||+.+....
T Consensus 175 ~~~~ilyggsV~~~n~~~~~~~~~--vDG~LVG~a~l~a~ 212 (225)
T 1hg3_A 175 PEVKVLCGAGISTGEDVKKAIELG--TVGVLLASGVTKAK 212 (225)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTCS
T ss_pred CCCEEEEeCCCCcHHHHHHHHhCC--CCEEEeCHHHHCCc
Confidence 57899999999966655554 445 89999999998753
No 103
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=46.78 E-value=44 Score=29.15 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=48.8
Q ss_pred HHH-HHHHHHHhcCCCccEEee--C-CCChHHHHHHHHHHHHHHhHhhCCCCCCCeE-EEEeCCCCH----HHHHHHHhc
Q 026913 7 NFC-AVALALNDLGYKAVGIRL--D-SGDLAYLSCEARKFFRTIEKEFGVPDFEKMS-ITASNDLNE----ETLDALNKQ 77 (231)
Q Consensus 7 naI-~va~~l~~~g~~~~gVRl--D-SGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~-I~~S~~Lde----~~i~~l~~~ 77 (231)
+.+ ..++++.+.|..+.++=. | +|++..+.+.++ .++.. ..+. |+++||+++ +.+....+.
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~-~~~~~---------~~~P~Vv~aGG~~~~~~~~~~~~a~~a 246 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQ-RLNGH---------INMPWVILSSGVDEKLFPRAVRVAMEA 246 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHH-HHHHT---------CCSCEEECCTTSCTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHH-hcccc---------CCCCeEEEecCCCHHHHHHHHHHHHHc
Confidence 444 336666677877665544 2 256555444333 34432 3446 999999988 457777777
Q ss_pred CCcccEEeeCCccccc
Q 026913 78 GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 78 g~~id~fGvGT~l~~~ 93 (231)
| .++|-||.++.+.
T Consensus 247 G--a~Gv~vGRaI~q~ 260 (304)
T 1to3_A 247 G--ASGFLAGRAVWSS 260 (304)
T ss_dssp T--CCEEEESHHHHGG
T ss_pred C--CeEEEEehHHhCc
Confidence 7 4899999999875
No 104
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=45.24 E-value=15 Score=32.14 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=33.0
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccCCCC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~~~p 97 (231)
++.|+++||++ .+.+.++...| .|+..|||.+..+...+
T Consensus 162 ~iPViaaGGI~~~~~~~~al~~G--AdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 162 SIPVIAAGGIADGEGAAAGFMLG--AEAVQVGTRFVVAKESN 201 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTBTTCC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEecHHHhcCcccc
Confidence 46799999997 99999988888 68999999999876543
No 105
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=44.96 E-value=45 Score=28.10 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=29.2
Q ss_pred CCeEEEEeCCCCHHHHHHHH-hcCCcccEEeeCCcccccC
Q 026913 56 EKMSITASNDLNEETLDALN-KQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~-~~g~~id~fGvGT~l~~~~ 94 (231)
++++|+..+|++.....++. +.| +|+|-||+.+....
T Consensus 172 ~~~~ilyggsV~~~n~~~~~~~~g--iDG~LVG~a~l~a~ 209 (226)
T 1w0m_A 172 PEVSVITGAGIESGDDVAAALRLG--TRGVLLASAAVKAK 209 (226)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTCS
T ss_pred CCCEEEEeCCCCcHHHHHHHHhCC--CCEEEECHHHHCCc
Confidence 57899999999966655554 445 89999999998753
No 106
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=44.70 E-value=31 Score=29.75 Aligned_cols=54 Identities=15% Similarity=0.270 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
....+|+.|.+. ++-.--.+++|+..|+.+.+-+.+|..+ ..+|++-||+.-..
T Consensus 185 vh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 238 (252)
T 2btm_A 185 VCGHIRSVVSRL---FGPEAAEAIRIQYGGSVKPDNIRDFLAQ-QQIDGALVGGASLE 238 (252)
T ss_dssp HHHHHHHHHHHH---HCHHHHTTSEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGSS
T ss_pred HHHHHHHHHHHh---cCccccCceeEEEcCCCCHHHHHHHHcC-CCCCeeEecHHHhC
Confidence 333466666552 1100014689999999999999999865 34899999987654
No 107
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=44.37 E-value=1e+02 Score=26.01 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHH
Q 026913 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKF 42 (231)
Q Consensus 6 ~naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ 42 (231)
..++.++++|-+.|.+..=||+.|.+-.+..+++++.
T Consensus 46 ~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~ 82 (232)
T 4e38_A 46 EDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQA 82 (232)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 4577889999999998888888888855554444443
No 108
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=44.15 E-value=15 Score=32.21 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=33.0
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccCCCC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~~~p 97 (231)
++.|+++||+. .+.+.++...| .++..|||.+..+...+
T Consensus 176 ~iPviaaGGI~~~~dv~~al~~G--A~gV~vGs~~~~~~e~~ 215 (326)
T 3bo9_A 176 NIPVIAAGGIADGRGMAAAFALG--AEAVQMGTRFVASVESD 215 (326)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTBSSCC
T ss_pred CCCEEEECCCCCHHHHHHHHHhC--CCEEEechHHHcCcccc
Confidence 46799999997 99999988888 58999999999876543
No 109
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=44.10 E-value=53 Score=32.73 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=46.1
Q ss_pred HhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 16 ~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.+.+..+.|+=-=.+.-..+..++.+.|+++ |..+++|++.|-.=......+.+.|+. ..|+.||....
T Consensus 652 ~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~-------G~~dv~VivGG~~P~~d~~~l~~~GaD-~~f~pgtd~~e 720 (762)
T 2xij_A 652 VDADVHAVGVSTLAAGHKTLVPELIKELNSL-------GRPDILVMCGGVIPPQDYEFLFEVGVS-NVFGPGTRIPK 720 (762)
T ss_dssp HHTTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHHTCC-EEECTTCCHHH
T ss_pred HHcCCCEEEEeeecHHHHHHHHHHHHHHHhc-------CCCCCEEEEeCCCCcccHHHHHhCCCC-EEeCCCCCHHH
Confidence 4445666666543445566678888889887 888899999883322234556667853 36788987755
No 110
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=43.26 E-value=1.2e+02 Score=26.10 Aligned_cols=71 Identities=17% Similarity=0.317 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhcCCCccEEeeCCCC-hHHH--HHHHHHHHHHHhHhhCCCCCCCeEEEEe-CCCCHHHHHHHHhcCCccc
Q 026913 7 NFCAVALALNDLGYKAVGIRLDSGD-LAYL--SCEARKFFRTIEKEFGVPDFEKMSITAS-NDLNEETLDALNKQGHEVD 82 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDSGD-l~~l--s~~~r~~ld~~~~~l~~~g~~~v~I~~S-~~Lde~~i~~l~~~g~~id 82 (231)
..++.++++.+.|.+ .|-+=+|+ +.+. ...+.++++....+++ +.|.+| |-++++.++.|.+.| ++
T Consensus 95 ei~~~~~~~~~~G~~--~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~------i~i~~s~g~~~~e~l~~L~~aG--~~ 164 (350)
T 3t7v_A 95 EIKETCKTLKGAGFH--MVDLTMGEDPYYYEDPNRFVELVQIVKEELG------LPIMISPGLMDNATLLKAREKG--AN 164 (350)
T ss_dssp HHHHHHHHHTTSCCS--EEEEEECCCHHHHHSTHHHHHHHHHHHHHHC------SCEEEECSSCCHHHHHHHHHTT--EE
T ss_pred HHHHHHHHHHHCCCC--EEEEeeCCCCccccCHHHHHHHHHHHHhhcC------ceEEEeCCCCCHHHHHHHHHcC--CC
Confidence 344556666666654 45555566 5433 3445666666544443 244556 458999999999998 56
Q ss_pred EEeeC
Q 026913 83 AFGIG 87 (231)
Q Consensus 83 ~fGvG 87 (231)
.+.+|
T Consensus 165 ~i~i~ 169 (350)
T 3t7v_A 165 FLALY 169 (350)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 66665
No 111
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=43.24 E-value=56 Score=28.54 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=29.9
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 56 ~~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
.++.|+++||+. .+.+.+....| .|+.+||+.++..
T Consensus 250 ~~ipvia~GGI~~~~d~~k~l~~G--Ad~V~iG~~~l~~ 286 (349)
T 1p0k_A 250 PASTMIASGGLQDALDVAKAIALG--ASCTGMAGHFLKA 286 (349)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHHH
Confidence 468999999985 88888877788 5899999988763
No 112
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=42.93 E-value=47 Score=28.81 Aligned_cols=34 Identities=9% Similarity=0.076 Sum_probs=28.8
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||+ +.+.+.++...| .|..+|||.++.
T Consensus 289 ~ipVi~~GGI~~~~da~~~l~~G--Ad~V~igr~~l~ 323 (336)
T 1f76_A 289 RLPIIGVGGIDSVIAAREKIAAG--ASLVQIYSGFIF 323 (336)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEeeHHHHh
Confidence 5789999998 578888888888 689999998764
No 113
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=42.58 E-value=14 Score=32.58 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=30.6
Q ss_pred eEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 58 MSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
+.++++||+ +.+.+..+.+.| .|++-||+.|..+.
T Consensus 210 VivvA~GGI~t~~dv~~~~~~G--AdgVlVGsai~~a~ 245 (297)
T 4adt_A 210 VVNFAAGGIATPADAAMCMQLG--MDGVFVGSGIFESE 245 (297)
T ss_dssp SEEEEESCCCSHHHHHHHHHTT--CSCEEESHHHHTSS
T ss_pred eEEEecCCCCCHHHHHHHHHcC--CCEEEEhHHHHcCC
Confidence 455699999 999999999999 68999999999864
No 114
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=42.50 E-value=30 Score=26.80 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=28.9
Q ss_pred CCCCCeEEEEeCCCC-------HHHHHHHHhcCCcccEEeeCCcc
Q 026913 53 PDFEKMSITASNDLN-------EETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 53 ~g~~~v~I~~S~~Ld-------e~~i~~l~~~g~~id~fGvGT~l 90 (231)
++.+++-|++|+|.+ .+.+..+.+.|..+.++|||+..
T Consensus 108 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~ 152 (198)
T 1n3y_A 108 RDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAF 152 (198)
T ss_dssp TTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGG
T ss_pred CCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccc
Confidence 345678899998864 34567777889899999999864
No 115
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=41.87 E-value=70 Score=26.06 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCCccEEe-eCCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCccc
Q 026913 7 NFCAVALALNDLGYKAVGIR-LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVD 82 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVR-lDSG--Dl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~id 82 (231)
+.+++++++.+.|....-++ ++.+ ...... +.+.+... ..++.|+++|+++ .+.+.++.+.| +|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~----~~i~~i~~------~~~iPvi~~Ggi~~~~~~~~~~~~G--ad 99 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILL----DVVARVAE------RVFIPLTVGGGVRSLEDARKLLLSG--AD 99 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHH----HHHHHHHT------TCCSCEEEESSCCSHHHHHHHHHHT--CS
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccH----HHHHHHHH------hCCCCEEEECCcCCHHHHHHHHHcC--CC
Confidence 46778888888887765555 1211 111111 22222211 1356899999997 78888888888 68
Q ss_pred EEeeCCccccc
Q 026913 83 AFGIGTYLVTC 93 (231)
Q Consensus 83 ~fGvGT~l~~~ 93 (231)
..-+|+.+...
T Consensus 100 ~V~lg~~~l~~ 110 (252)
T 1ka9_F 100 KVSVNSAAVRR 110 (252)
T ss_dssp EEEECHHHHHC
T ss_pred EEEEChHHHhC
Confidence 99999988763
No 116
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=41.52 E-value=5.5 Score=33.19 Aligned_cols=36 Identities=25% Similarity=0.176 Sum_probs=0.0
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.++++||+. .+.+.++.+.| +|+.-||+.+....
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~G--ad~v~vg~al~~~p 236 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLRG--ADKVSINTAAVENP 236 (247)
T ss_dssp ---------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CcHhhccHHHHcCc
Confidence 46799999997 89999999888 78888999997743
No 117
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=41.31 E-value=30 Score=31.25 Aligned_cols=70 Identities=27% Similarity=0.283 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCCCccEEeeCC--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEE
Q 026913 7 NFCAVALALNDLGYKAVGIRLDS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAF 84 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDS--GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~f 84 (231)
...+.++++.+.|.++ |=+|+ |....+. +..+.+.+. ++++.|++.|-.+.+.++.+.+.|+.....
T Consensus 100 ~~~e~~~~a~~aGvdv--I~id~a~G~~~~~~-e~I~~ir~~--------~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 100 NELQRAEALRDAGADF--FCVDVAHAHAKYVG-KTLKSLRQL--------LGSRCIMAGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHTTCCE--EEEECSCCSSHHHH-HHHHHHHHH--------HTTCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCE--EEEeCCCCCcHhHH-HHHHHHHHh--------cCCCeEEEcCcCCHHHHHHHHHcCCCEEEE
Confidence 3445677777788764 55553 6543322 223333332 146789988889999999999999754444
Q ss_pred eeC
Q 026913 85 GIG 87 (231)
Q Consensus 85 GvG 87 (231)
|+|
T Consensus 169 g~g 171 (361)
T 3r2g_A 169 GIG 171 (361)
T ss_dssp CCS
T ss_pred cCC
Confidence 544
No 118
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=40.81 E-value=14 Score=32.95 Aligned_cols=36 Identities=22% Similarity=0.222 Sum_probs=30.3
Q ss_pred eEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 58 v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
..|++.+..+.+.++++++.|. .|..|+|-.++.+.
T Consensus 287 ~~v~~~g~~~~~~ae~~l~~G~-aD~V~~gR~~ladP 322 (358)
T 4a3u_A 287 PPLVLNQDYTFETAQAALDSGV-ADAISFGRPFIGNP 322 (358)
T ss_dssp SCEEEESSCCHHHHHHHHHHTS-CSEEEESHHHHHCT
T ss_pred CcEEEeCCCCHHHHHHHHHcCC-ceEeHhhHHHHhCh
Confidence 3578899999999999998875 68999999998853
No 119
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=40.45 E-value=13 Score=31.26 Aligned_cols=36 Identities=11% Similarity=0.260 Sum_probs=31.3
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
+..|.+-||++++++..+.+.| .|.|=+|+.+..+.
T Consensus 169 ~~~I~VdGGI~~~t~~~~~~aG--Ad~~VvGsaIf~a~ 204 (228)
T 3ovp_A 169 SLDIEVDGGVGPDTVHKCAEAG--ANMIVSGSAIMRSE 204 (228)
T ss_dssp TCEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTCS
T ss_pred CCCEEEeCCcCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 5689999999999999999999 57888999887643
No 120
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=40.31 E-value=40 Score=29.10 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=30.8
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.+++|+..|+.+..-+.+|..+ ..+|++-||+.-..
T Consensus 207 ~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 242 (257)
T 2yc6_A 207 QHIRIIYGGSANGSNNEKLGQC-PNIDGFLVGGASLK 242 (257)
T ss_dssp TTCEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred ccceEEEcCccCHHHHHHHHcC-CCCCeeeecHHHHH
Confidence 4689999999999999999876 34899999987654
No 121
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=40.21 E-value=61 Score=26.48 Aligned_cols=72 Identities=13% Similarity=0.171 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhcCCCccEEeeC-------CCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhc-
Q 026913 7 NFCAVALALNDLGYKAVGIRLD-------SGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQ- 77 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlD-------SGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~- 77 (231)
+..+.++++.+.|.....+ .+ +|--..+.+++++. .++.|+++||+. .+.+.++.+.
T Consensus 145 ~~~e~~~~~~~~G~~~i~~-t~~~~~g~~~g~~~~~i~~l~~~-------------~~iPvia~GGI~~~~d~~~~~~~~ 210 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVH-TEIEKDGTLQEHDFSLTKKIAIE-------------AEVKVLAAGGISSENSLKTAQKVH 210 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEE-EETTHHHHTCCCCHHHHHHHHHH-------------HTCEEEEESSCCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEE-EeecccccCCcCCHHHHHHHHHh-------------cCCcEEEECCCCCHHHHHHHHhcc
Confidence 3456677777777775444 22 23212233333322 245899999999 5999999876
Q ss_pred ----CCcccEEeeCCccccc
Q 026913 78 ----GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 78 ----g~~id~fGvGT~l~~~ 93 (231)
|. +|+.=||+.|...
T Consensus 211 ~~~~G~-adgv~vgsal~~~ 229 (241)
T 1qo2_A 211 TETNGL-LKGVIVGRAFLEG 229 (241)
T ss_dssp HHTTTS-EEEEEECHHHHTT
T ss_pred cccCCe-EeEEEeeHHHHcC
Confidence 52 5788899998774
No 122
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=39.85 E-value=51 Score=27.55 Aligned_cols=36 Identities=17% Similarity=0.445 Sum_probs=27.5
Q ss_pred CCCCeEEEEeCCCCH------HHHHHHHhcCCcccEEeeCCc
Q 026913 54 DFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~I~~S~~Lde------~~i~~l~~~g~~id~fGvGT~ 89 (231)
+..++-|++++|.+- +.+..+.+.|..+-++|||..
T Consensus 127 ~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~ 168 (281)
T 4hqf_A 127 NANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQG 168 (281)
T ss_dssp TCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 356789999998753 345566678989999999985
No 123
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=39.70 E-value=36 Score=28.07 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=30.1
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|++.+|++ .+.+..+.+.| +|++=||+.++...
T Consensus 170 ~~~ii~ggGI~~~~~~~~~~~~g--aDgvlVGsAi~~~~ 206 (219)
T 2h6r_A 170 DVKVLCGAGISKGEDVKAALDLG--AEGVLLASGVVKAK 206 (219)
T ss_dssp TCEEEECSSCCSHHHHHHHHTTT--CCCEEESHHHHTCS
T ss_pred CCeEEEEeCcCcHHHHHHHhhCC--CCEEEEcHHHhCcc
Confidence 67999999998 57777787777 79999999998753
No 124
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=39.06 E-value=39 Score=27.64 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=30.1
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
++.|+++||+. .+.+.++.+.| +|+.=||+.+....
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vgsal~~~~ 232 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQAG--AEAALAASVFHFGE 232 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTS
T ss_pred CCCEEEeCCCCCHHHHHHHHHCC--CHHHHHHHHHHcCC
Confidence 56799999999 59999998777 68888999998753
No 125
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=38.59 E-value=34 Score=27.10 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=26.8
Q ss_pred CCCCeEEEEeCCCCH--------HHHHHHHhcCCcccEEeeCCc
Q 026913 54 DFEKMSITASNDLNE--------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~I~~S~~Lde--------~~i~~l~~~g~~id~fGvGT~ 89 (231)
+..++-|++++|-+- +.+..+.+.|..+-++|||..
T Consensus 114 ~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~ 157 (202)
T 1ijb_A 114 EASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPH 157 (202)
T ss_dssp TSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTT
T ss_pred CCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 456788999998752 334567778888888999974
No 126
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=38.38 E-value=98 Score=23.28 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=24.5
Q ss_pred CCCCeEEEEeCCCC--------HHHHHHHHhcCCcccEEeeC
Q 026913 54 DFEKMSITASNDLN--------EETLDALNKQGHEVDAFGIG 87 (231)
Q Consensus 54 g~~~v~I~~S~~Ld--------e~~i~~l~~~g~~id~fGvG 87 (231)
+.+.+-|++|+|.+ ...+..+.+.|..+.++|+|
T Consensus 102 ~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg 143 (182)
T 1shu_X 102 KTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVL 143 (182)
T ss_dssp GSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCC
Confidence 45678899999984 12344556678888888888
No 127
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=38.27 E-value=28 Score=30.11 Aligned_cols=53 Identities=13% Similarity=0.183 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
...+|+.|.+. ++-.--.+++|+..|+.+++-+.+|..+ ..+|++.||+.-..
T Consensus 188 h~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgASLk 240 (255)
T 1b9b_A 188 HAFIRKLLSEM---YDEETAGSIRILYGGSIKPDNFLGLIVQ-KDIDGGLVGGASLK 240 (255)
T ss_dssp HHHHHHHHHHH---SCHHHHHHSEEEEESSCCHHHHTTTSSS-TTCCEEEESGGGTS
T ss_pred HHHHHHHHHHh---cCccccCcceEEEcCcCCHHHHHHHHcC-CCCCeeEeehHhhc
Confidence 33366666653 1100013689999999999999999865 34999999987655
No 128
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=37.68 E-value=1.5e+02 Score=24.29 Aligned_cols=66 Identities=14% Similarity=0.116 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhcCCCccEEeeCCCC----h-HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCc
Q 026913 7 NFCAVALALNDLGYKAVGIRLDSGD----L-AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHE 80 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDSGD----l-~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~ 80 (231)
+.+.+++.+.+.|.. +|+..+|- . ....+.+++ .. + .++.|++|||+. .+.+.++.+.|+.
T Consensus 133 ~~~~~a~~a~eaGad--~I~tstg~~~gga~~~~i~~v~~---~v-------~-~~ipVia~GGI~t~~da~~~l~aGA~ 199 (225)
T 1mzh_A 133 EIKKAVEICIEAGAD--FIKTSTGFAPRGTTLEEVRLIKS---SA-------K-GRIKVKASGGIRDLETAISMIEAGAD 199 (225)
T ss_dssp HHHHHHHHHHHHTCS--EEECCCSCSSSCCCHHHHHHHHH---HH-------T-TSSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCCC--EEEECCCCCCCCCCHHHHHHHHH---Hh-------C-CCCcEEEECCCCCHHHHHHHHHhCch
Confidence 345666666676754 56777642 1 112222222 22 1 367999999985 6777777778854
Q ss_pred ccEEeeC
Q 026913 81 VDAFGIG 87 (231)
Q Consensus 81 id~fGvG 87 (231)
.+|++
T Consensus 200 --~iG~s 204 (225)
T 1mzh_A 200 --RIGTS 204 (225)
T ss_dssp --EEEES
T ss_pred --HHHHc
Confidence 44544
No 129
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=37.56 E-value=67 Score=31.84 Aligned_cols=69 Identities=22% Similarity=0.273 Sum_probs=46.0
Q ss_pred HhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 16 ~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.+..+.|+=-=.+.-..+..++.+.|+++ |..+++|++.|-.=......+.+.|+. ..|+.||.+..
T Consensus 644 ~e~~adiVglSsl~~~~~~~~~~vi~~L~~~-------G~~~i~VivGG~~p~~d~~~l~~~GaD-~~f~~gt~~~e 712 (727)
T 1req_A 644 VEADVHVVGVSSLAGGHLTLVPALRKELDKL-------GRPDILITVGGVIPEQDFDELRKDGAV-EIYTPGTVIPE 712 (727)
T ss_dssp HHTTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHTTEE-EEECTTCCHHH
T ss_pred HHcCCCEEEEeeecHhHHHHHHHHHHHHHhc-------CCCCCEEEEcCCCccccHHHHHhCCCC-EEEcCCccHHH
Confidence 4445666666544455566678888888887 888899999884443344556677742 36777887654
No 130
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=37.08 E-value=91 Score=25.38 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCcccEEe
Q 026913 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~id~fG 85 (231)
+.+++++++.+.|....-|+--+++-.... ...+.+.+... ..++.|++.|+++ ++.+.++.+.| +|..-
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~-~~~~~i~~i~~------~~~ipvi~~ggI~~~~~~~~~~~~G--ad~V~ 101 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRK-TMLELVEKVAE------QIDIPFTVGGGIHDFETASELILRG--ADKVS 101 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHH-HHHHHHHHHHT------TCCSCEEEESSCCSHHHHHHHHHTT--CSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCc-ccHHHHHHHHH------hCCCCEEEeCCCCCHHHHHHHHHcC--CCEEE
Confidence 467788889888887666664443321111 11122222211 1356788888886 56788888888 57888
Q ss_pred eCCccccc
Q 026913 86 IGTYLVTC 93 (231)
Q Consensus 86 vGT~l~~~ 93 (231)
+|+.+...
T Consensus 102 lg~~~l~~ 109 (253)
T 1thf_D 102 INTAAVEN 109 (253)
T ss_dssp ESHHHHHC
T ss_pred EChHHHhC
Confidence 99987663
No 131
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=36.93 E-value=56 Score=26.07 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=27.6
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCcccEEeeCCc
Q 026913 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 53 ~g~~~v~I~~S~~Lde------~~i~~l~~~g~~id~fGvGT~ 89 (231)
++.+++-|++|+|.+. +.+..+.+.|..+-++|||+.
T Consensus 122 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~ 164 (223)
T 2b2x_A 122 RGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGH 164 (223)
T ss_dssp TTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGG
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCc
Confidence 3556788999998763 345666778888888899975
No 132
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=36.89 E-value=26 Score=30.28 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=30.7
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.+++|+..|+.+.+-+.+|..+ ..+|++-||+.-..
T Consensus 205 ~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 240 (256)
T 1aw2_A 205 KNVVIQYGGSVKPENAAAYFAQ-PDIDGALVGGAALD 240 (256)
T ss_dssp HHCEEEECSCCCTTTHHHHTTS-TTCCEEEESGGGGC
T ss_pred ccccEEEcCCCCHHHHHHHHcC-CCCCeeeecHHHhC
Confidence 3589999999999999999876 24899999987655
No 133
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=36.77 E-value=18 Score=29.66 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=30.3
Q ss_pred CeEEEEeCCCCH-HHHHHHHhc---CCcccEEeeCCccccc
Q 026913 57 KMSITASNDLNE-ETLDALNKQ---GHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Lde-~~i~~l~~~---g~~id~fGvGT~l~~~ 93 (231)
++.|+++||++. +.+.++.+. | ++++-||+.+...
T Consensus 193 ~ipvia~GGI~~~~d~~~~~~~~~~G--ad~v~vG~al~~~ 231 (244)
T 2y88_A 193 DAPVIASGGVSSLDDLRAIATLTHRG--VEGAIVGKALYAR 231 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGT--EEEEEECHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCC--CCEEEEcHHHHCC
Confidence 568999999995 999999987 7 6899999998764
No 134
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=36.50 E-value=89 Score=27.47 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=30.5
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||+ +.+.++++.+.| .|...|||.++..
T Consensus 227 ~iPV~vGGGIrs~Eda~~ll~aG--AD~VVVGSAav~d 262 (286)
T 3vk5_A 227 DQVLFVSGNVRSGRQVTEYLDSG--ADYVGFAGALEQP 262 (286)
T ss_dssp TCEEEEESSCCSHHHHHHHHHTT--CSEEEESGGGSST
T ss_pred CCCEEEEeCCCCHHHHHHHHHcC--CCEEEECchhhcC
Confidence 5689999998 688899999988 6899999999874
No 135
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=36.32 E-value=30 Score=29.77 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
...+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 187 h~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 239 (250)
T 2j27_A 187 HALIRSWVSSK---IGADVAGELRILYGGSVNGKNARTLYQQ-RDVNGFLVGGASLK 239 (250)
T ss_dssp HHHHHHHHHHH---TCHHHHHHCCEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHh---cChhhcccccEEEcCCCCHHHHHHHHcC-CCCCeeeeehHHHH
Confidence 33466666553 1100013589999999999999999865 34899999987655
No 136
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=35.75 E-value=34 Score=26.55 Aligned_cols=37 Identities=11% Similarity=0.221 Sum_probs=28.1
Q ss_pred CCCCeEEEEeCCCCH-------HHHHHHHhcCCcccEEeeCCcc
Q 026913 54 DFEKMSITASNDLNE-------ETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 54 g~~~v~I~~S~~Lde-------~~i~~l~~~g~~id~fGvGT~l 90 (231)
+.+++-|++|+|.+- +.+..+.+.|..+-++|||...
T Consensus 105 ~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~ 148 (194)
T 1mf7_A 105 NAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAF 148 (194)
T ss_dssp TSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGG
T ss_pred CCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccc
Confidence 456788899988643 4567788889888889999753
No 137
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=35.72 E-value=34 Score=29.38 Aligned_cols=53 Identities=23% Similarity=0.355 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
...+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 185 h~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 237 (248)
T 1o5x_A 185 HKEIRKIVKDT---CGEKQANQIRILYGGSVNTENCSSLIQQ-EDIDGFLVGNASLK 237 (248)
T ss_dssp HHHHHHHHHHH---TCHHHHHHSEEEECSCCCTTTHHHHHTS-TTCCEEEECGGGGS
T ss_pred HHHHHHHHHHh---cCccccCcceEEEcCCCCHHHHHHHHcC-CCCCeeEeeHHHHH
Confidence 33466666653 1100013689999999999999999875 34899999987655
No 138
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=35.65 E-value=1.1e+02 Score=25.44 Aligned_cols=31 Identities=19% Similarity=0.117 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEeeCCCChHHH
Q 026913 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYL 35 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVRlDSGDl~~l 35 (231)
...++.++++|-+.|.++.=||..+-+-.+.
T Consensus 37 ~~~~~~~~~al~~gGv~~iel~~k~~~~~~~ 67 (225)
T 1mxs_A 37 EEDILPLADALAAGGIRTLEVTLRSQHGLKA 67 (225)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEESSSTHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCccHHHH
Confidence 3467888989888999998999876553333
No 139
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=35.46 E-value=43 Score=27.56 Aligned_cols=72 Identities=18% Similarity=0.145 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcCCCccEEe-eCC-----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCC
Q 026913 7 NFCAVALALNDLGYKAVGIR-LDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGH 79 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVR-lDS-----GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~ 79 (231)
+.+++++++.+.|....-|+ +|. |....+.++ +.+. -++.++++|++. .+.+.++.+.|
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~----i~~~---------~~ipvi~~Ggi~~~~~~~~~l~~G- 101 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF----VRPL---------TTLPIIASGGAGKMEHFLEAFLRG- 101 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHH----HGGG---------CCSCEEEESCCCSHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHH----HHHh---------CCCCEEEeCCCCCHHHHHHHHHcC-
Confidence 46788999999888765554 232 222222222 2221 245788898885 67788888888
Q ss_pred cccEEeeCCccccc
Q 026913 80 EVDAFGIGTYLVTC 93 (231)
Q Consensus 80 ~id~fGvGT~l~~~ 93 (231)
+|..-|||.+...
T Consensus 102 -ad~V~ig~~~l~d 114 (247)
T 3tdn_A 102 -ADKVSINTAAVEN 114 (247)
T ss_dssp -CSEECCSHHHHHC
T ss_pred -CCeeehhhHHhhC
Confidence 7888999998763
No 140
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=35.33 E-value=35 Score=31.95 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=44.3
Q ss_pred CChHHHHHHHHHHHHHH-hHhhCCCCCCCeEEEEeCCCCHHHHHHHHh-cCCcccEEeeCCc
Q 026913 30 GDLAYLSCEARKFFRTI-EKEFGVPDFEKMSITASNDLNEETLDALNK-QGHEVDAFGIGTY 89 (231)
Q Consensus 30 GDl~~ls~~~r~~ld~~-~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~-~g~~id~fGvGT~ 89 (231)
.+..+...++++.|.++ ..++..+ ..+-+..|||||=-.|..+.. ++.++.+|.||..
T Consensus 217 ~~~~~~~~~l~~~L~~aV~~rl~sd--~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~ 276 (513)
T 1jgt_A 217 LPEGEAVAAVRAALEKAVAQRVTPG--DTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTD 276 (513)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCTT--CCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC--CcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCC
Confidence 35677888899999988 5555432 467899999999999998865 3456889988864
No 141
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=34.44 E-value=1.8e+02 Score=24.29 Aligned_cols=63 Identities=13% Similarity=0.063 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCC
Q 026913 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~ 79 (231)
...|+.++++|.+-|.+..=|=+.|.+-....+++++.+ +++.|=+..=+|.+..+...+.|+
T Consensus 24 ~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~------------p~~~IGAGTVlt~~~a~~ai~AGA 86 (217)
T 3lab_A 24 LVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV------------PEAIVGAGTVCTADDFQKAIDAGA 86 (217)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC------------TTSEEEEECCCSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC------------CCCeEeeccccCHHHHHHHHHcCC
Confidence 356888999999989887666667777444444444333 334444444555555555555544
No 142
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=34.30 E-value=61 Score=24.58 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=24.7
Q ss_pred CCCeEEEEeCCCC--------HHHHHHHHhcCCcccEEeeC
Q 026913 55 FEKMSITASNDLN--------EETLDALNKQGHEVDAFGIG 87 (231)
Q Consensus 55 ~~~v~I~~S~~Ld--------e~~i~~l~~~g~~id~fGvG 87 (231)
.+++-|++|+|.+ ...+..+.+.|..+-++|||
T Consensus 106 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg 146 (185)
T 3n2n_F 106 TASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK 146 (185)
T ss_dssp EEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS
T ss_pred CCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec
Confidence 4568899999987 34456666778778888888
No 143
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=33.75 E-value=26 Score=28.75 Aligned_cols=35 Identities=20% Similarity=0.064 Sum_probs=29.7
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||+. .+.+.++.+.| +|++=||+.+...
T Consensus 195 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vGsal~~~ 230 (253)
T 1thf_D 195 TLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFR 230 (253)
T ss_dssp CSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--ChHHHHHHHHHcC
Confidence 56899999999 59999998877 6788899998774
No 144
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=33.49 E-value=47 Score=28.16 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=31.3
Q ss_pred CCeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 56 ~~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
.++.|++.+|+. .+.+.++.+.| .|++-|||.++...
T Consensus 177 ~~iPviv~gGI~t~eda~~~~~~G--AdgViVGSAi~~a~ 214 (264)
T 1xm3_A 177 AKVPVIVDAGIGSPKDAAYAMELG--ADGVLLNTAVSGAD 214 (264)
T ss_dssp CSSCBEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 356899999995 99999999888 58999999998754
No 145
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=33.49 E-value=1.1e+02 Score=24.57 Aligned_cols=39 Identities=18% Similarity=0.083 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHH
Q 026913 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRT 45 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~ 45 (231)
|+-.++..|++.|..+..+++=.=|...+...+++.+++
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~ 62 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEV 62 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc
Confidence 555667777788877655554333455555555555554
No 146
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=33.38 E-value=41 Score=28.57 Aligned_cols=51 Identities=16% Similarity=0.181 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 34 ~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
+.+.++-+.+++. +. .+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 172 e~a~ev~~~IR~~---l~----~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsl~ 222 (233)
T 2jgq_A 172 EDIYLTHGFLKQI---LN----QKTPLLYGGSVNTQNAKEILGI-DSVDGLLIGSASWE 222 (233)
T ss_dssp HHHHHHHHHHHHH---SC----TTSCEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHH---Hh----cCCcEEEcCCcChhhHHHHhcC-CCCCeeEecHHHhC
Confidence 3444555555553 21 5789999999999999999875 34999999987654
No 147
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=32.92 E-value=2.5e+02 Score=24.66 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=32.8
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCcccccCCCCc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~~~~p~ 98 (231)
++.|+++||+- ...|.+.+..| .++-+|||.+..+...|.
T Consensus 223 ~ipvIa~GGI~~g~di~kAlalG--A~~V~vG~~fl~~~Es~~ 263 (351)
T 2c6q_A 223 KGHIISDGGCSCPGDVAKAFGAG--ADFVMLGGMLAGHSESGG 263 (351)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSCS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcC--CCceeccHHHhcCccCcc
Confidence 47899999986 88888888889 578999999988665554
No 148
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=32.91 E-value=43 Score=31.19 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=43.8
Q ss_pred CChHHHHHHHHHHHHHH-hHhhCCCCCCCeEEEEeCCCCHHHHHHHHhc-CCcccEEeeCCc
Q 026913 30 GDLAYLSCEARKFFRTI-EKEFGVPDFEKMSITASNDLNEETLDALNKQ-GHEVDAFGIGTY 89 (231)
Q Consensus 30 GDl~~ls~~~r~~ld~~-~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~-g~~id~fGvGT~ 89 (231)
.+..+...++++.|.++ ..++..+ ..+-+..|||+|=-.|..+..+ +.++.+|.+|..
T Consensus 214 ~~~~~~~~~l~~~L~~aV~~rl~sd--~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~ 273 (503)
T 1q15_A 214 LPREPLLALIDRYLNAPLEDLAPRF--DTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTE 273 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGC--SEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC--CcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 45677888899999887 5444322 4578999999999999988754 557888888754
No 149
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=32.74 E-value=43 Score=28.77 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
...+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 188 h~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 240 (251)
T 2vxn_A 188 HLLLRKWVSEN---IGTDVAAKLRILYGGSVNAANAATLYAK-PDINGFLVGGASLK 240 (251)
T ss_dssp HHHHHHHHHHH---TCHHHHHHCEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHh---cChhhcccccEEEcCCcCHhHHHHHhcC-CCCCeeeecHHHHH
Confidence 33366666553 1100013589999999999999999875 35999999987655
No 150
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=32.39 E-value=59 Score=25.67 Aligned_cols=37 Identities=5% Similarity=0.071 Sum_probs=27.3
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHHhcCCcccEEeeCCc
Q 026913 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 53 ~g~~~v~I~~S~~Lde------~~i~~l~~~g~~id~fGvGT~ 89 (231)
++.+++-|++|+|.+- +.+..+.+.|..+-++|||+.
T Consensus 107 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 107 RGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGS 149 (213)
T ss_dssp TTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHH
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccc
Confidence 3566788999998753 345666778888888899875
No 151
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=32.32 E-value=1e+02 Score=24.47 Aligned_cols=54 Identities=11% Similarity=-0.033 Sum_probs=23.7
Q ss_pred HHHHHHhcCCCccEE-eeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHH
Q 026913 11 VALALNDLGYKAVGI-RLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEET 70 (231)
Q Consensus 11 va~~l~~~g~~~~gV-RlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~ 70 (231)
+++.|.+.|++-.++ --+.+... +.+-.+-+.++ +.-.|++. .++..++.+.+.
T Consensus 111 a~~~L~~~G~~~i~~i~~~~~~~~--~~~R~~gf~~~---l~~~~~~~-~~~~~~~~~~~~ 165 (272)
T 3o74_A 111 LAASLLSSAPRSIALIGARPELSV--SQARAGGFDEA---LQGYTGEV-RRYQGEAFSREC 165 (272)
T ss_dssp HHHHHHTTCCSEEEEEEECTTSHH--HHHHHHHHHHH---TTTCCSEE-EEEEESSSSHHH
T ss_pred HHHHHHHCCCcEEEEEecCCCCcc--HHHHHHHHHHH---HHHcCCCh-heeecCCCCHHH
Confidence 356677777663333 33333321 11112222222 22225443 455666666554
No 152
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=32.30 E-value=34 Score=32.53 Aligned_cols=40 Identities=8% Similarity=0.137 Sum_probs=32.8
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcC------CcccEEeeCCcccccCC
Q 026913 56 EKMSITASNDLNEETLDALNKQG------HEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g------~~id~fGvGT~l~~~~~ 95 (231)
.++.+++=||++++.+.++.+++ +-.+++.|++.+..+.+
T Consensus 172 ~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~d 217 (540)
T 3nl6_A 172 HWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLD 217 (540)
T ss_dssp TTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTT
T ss_pred CCCCEEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhcCCC
Confidence 46899999999999999998732 33789999999987543
No 153
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=32.30 E-value=1.2e+02 Score=27.00 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCCCccEE------eeCCCChH-HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCc
Q 026913 9 CAVALALNDLGYKAVGI------RLDSGDLA-YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHE 80 (231)
Q Consensus 9 I~va~~l~~~g~~~~gV------RlDSGDl~-~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~ 80 (231)
.+.|+.+.+.|.....| .+|+|-.. ....++++ .+ + .++.|+++||+. ...+.+.+..|
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~---~v-------~-~~ipVia~GGI~~g~D~~kalalG-- 306 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAE---RV-------N-KRVPIVFDSGVRRGEHVAKALASG-- 306 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHH---HH-------T-TSSCEEECSSCCSHHHHHHHHHTT--
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHH---Hh-------C-CCCeEEEECCCCCHHHHHHHHHcC--
Confidence 45577777778776555 36776432 22222222 22 1 257899999984 56677777788
Q ss_pred ccEEeeCCcccc
Q 026913 81 VDAFGIGTYLVT 92 (231)
Q Consensus 81 id~fGvGT~l~~ 92 (231)
.|+.+||+.+..
T Consensus 307 Ad~V~iGr~~l~ 318 (368)
T 2nli_A 307 ADVVALGRPVLF 318 (368)
T ss_dssp CSEEEECHHHHH
T ss_pred CCEEEECHHHHH
Confidence 589999987765
No 154
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=32.26 E-value=1.1e+02 Score=26.63 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=27.6
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||+ +...+.+....| .|+.+||+.+..
T Consensus 256 ~ipvia~GGI~~~~d~~kal~~G--Ad~V~igr~~l~ 290 (332)
T 1vcf_A 256 HLPLVASGGVYTGTDGAKALALG--ADLLAVARPLLR 290 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEECGGGHH
T ss_pred CCeEEEECCCCCHHHHHHHHHhC--CChHhhhHHHHH
Confidence 5789999998 567777777778 589999998775
No 155
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=31.40 E-value=45 Score=28.75 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
....+|+.|.+.+.+. -.+++|+..|+.++.-+.+|..+ ..+|++-||+.-..
T Consensus 186 vh~~IR~~l~~~~~~~----a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 238 (255)
T 1tre_A 186 VHKFIRDHIAKVDANI----AEQVIIQYGGSVNASNAAELFAQ-PDIDGALVGGASLK 238 (255)
T ss_dssp HHHHHHHHHHHHHHHH----HHHCEEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGC
T ss_pred HHHHHHHHHHhcChhh----cCcccEEEcCCCCHHHHHHHHcC-CCCCeeEecHHHhC
Confidence 3334666665431111 14689999999999999999875 34999999987655
No 156
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=31.13 E-value=40 Score=28.98 Aligned_cols=54 Identities=17% Similarity=0.211 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
....+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 184 vh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 237 (248)
T 1r2r_A 184 VHEKLRGWLKSN---VSDAVAQSTRIIYGGSVTGATCKELASQ-PDVDGFLVGGASLK 237 (248)
T ss_dssp HHHHHHHHHHHH---TCHHHHHHCCEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHh---cChhhcccccEEEcCCcCHhHHHHHHcC-CCCCeeEechHHhC
Confidence 333466666653 1100013589999999999999999875 35999999987655
No 157
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=30.59 E-value=1.1e+02 Score=24.87 Aligned_cols=64 Identities=16% Similarity=-0.044 Sum_probs=39.3
Q ss_pred HHHHhcCCCccEEeeCC-CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC--HHHHHHHHhcCCcccEEe
Q 026913 13 LALNDLGYKAVGIRLDS-GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 13 ~~l~~~g~~~~gVRlDS-GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld--e~~i~~l~~~g~~id~fG 85 (231)
.++++.|+.+.-+..+| +|.......++.++.. +. +.-|+.+.+.+ ...+..+.+.|.|+..++
T Consensus 27 ~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~--------~v-dgiii~~~~~~~~~~~~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 27 KAAEELKVDLQILAPPGANDVPKQVQFIESALAT--------YP-SGIATTIPSDTAFSKSLQRANKLNIPVIAVD 93 (297)
T ss_dssp HHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT--------CC-SEEEECCCCSSTTHHHHHHHHHHTCCEEEES
T ss_pred HHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc--------CC-CEEEEeCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 34556788775444344 4876665555555443 33 33455555556 778888888898876654
No 158
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=30.52 E-value=38 Score=29.59 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
...+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 204 h~~IR~~l~~~---~~~~~a~~vrILYGGSV~~~N~~el~~~-~diDG~LVGgASLk 256 (275)
T 1mo0_A 204 HEWIRAFLKEK---VSPAVADATRIIYGGSVTADNAAELGKK-PDIDGFLVGGASLK 256 (275)
T ss_dssp HHHHHHHHHHH---TCHHHHHHSCEEEESSCCTTTHHHHTTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHh---hChhhcCcccEEEcCCCCHhhHHHHhcC-CCCCeeEechHHhC
Confidence 33466666553 1100013589999999999999999875 35999999988765
No 159
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=30.32 E-value=1.6e+02 Score=24.68 Aligned_cols=46 Identities=11% Similarity=0.311 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhc---CCcccEEeeCCc
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQ---GHEVDAFGIGTY 89 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~---g~~id~fGvGT~ 89 (231)
.+-+|+..+++ | .+++|-+|||+- .+...++.+. |+..+-|=+||+
T Consensus 171 v~lm~~~i~~~-------g-~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 171 AAAIARYIKEK-------G-YRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp HHHHHHHHHHH-------T-CCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred HHHHHHHHHHh-------C-CCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 34456665555 3 568999999997 7777777777 987777888876
No 160
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=30.04 E-value=3.1e+02 Score=24.77 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=31.8
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCC
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p 97 (231)
++.|++|||+ +...+.++...| .++-+||+.+..+...|
T Consensus 336 ~ipvia~GGi~~~~di~kal~~G--A~~v~vG~~~~~~~e~~ 375 (491)
T 1zfj_A 336 GKTIIADGGIKYSGDIVKALAAG--GNAVMLGSMFAGTDEAP 375 (491)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBSSCC
T ss_pred CCCEEeeCCCCCHHHHHHHHHcC--CcceeeCHHhhCCCcCc
Confidence 5789999997 688888888888 67889999998765544
No 161
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=30.00 E-value=98 Score=27.44 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=27.4
Q ss_pred CCeEEEEeCCCC-----------HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 56 EKMSITASNDLN-----------EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 56 ~~v~I~~S~~Ld-----------e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++++++.. +.| .+.|+.|.++|.+||+.|+=+|+...
T Consensus 184 P~a~L~~N-Dyn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~ 231 (341)
T 3niy_A 184 PDAILIYN-DYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYR 231 (341)
T ss_dssp TTSEEEEE-ESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT
T ss_pred CCceEEee-ccccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecCCC
Confidence 67788774 444 24566677789999999999998653
No 162
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=29.20 E-value=1.8e+02 Score=25.93 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=27.9
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.|+++||+ +.+.+.++...| .|...|||.++-
T Consensus 298 ~ipvI~~GGI~s~~da~~~l~~G--Ad~V~vgra~l~ 332 (367)
T 3zwt_A 298 RVPIIGVGGVSSGQDALEKIRAG--ASLVQLYTALTF 332 (367)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHh
Confidence 6789999998 477788887788 589999999853
No 163
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=28.91 E-value=83 Score=21.40 Aligned_cols=54 Identities=7% Similarity=-0.057 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhcCCCc--------cEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCC
Q 026913 5 VPNFCAVALALNDLGYKA--------VGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASND 65 (231)
Q Consensus 5 v~naI~va~~l~~~g~~~--------~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~ 65 (231)
-.||-++...|+..|+.. +=||+=.=.-..-+.++++.|.+. |++..-|..|||
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~-------g~~~~iv~~~~g 81 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMA-------GHTNCIRLAAGG 81 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHH-------CCSCCBCCCCCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHc-------CCCcEEEeCCCC
Confidence 457777877787777653 234442211123345566666665 777766666664
No 164
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=28.84 E-value=53 Score=28.39 Aligned_cols=54 Identities=13% Similarity=0.182 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
....+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 183 vh~~IR~~l~~~---~~~~va~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 236 (259)
T 2i9e_A 183 VHKALRQWICEN---IDAKVGNSIRIQYGGSVTAANCKELASQ-PDIDGFLVGGASLK 236 (259)
T ss_dssp HHHHHHHHHHHH---TCHHHHHHCEEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHh---cChhhcccccEEEcCCCCHhhHHHHhcC-CCCCeeeechHhhC
Confidence 334467666653 1100013589999999999999999875 34999999988765
No 165
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=28.45 E-value=2.2e+02 Score=22.52 Aligned_cols=74 Identities=14% Similarity=0.208 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCCccEEe-eCCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCccc
Q 026913 7 NFCAVALALNDLGYKAVGIR-LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVD 82 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVR-lDSG--Dl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~id 82 (231)
+.+++++++.+.|....-|+ .|.. ........+++ +.+. .++.|++++++. .+.+.++.+.| .|
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~-i~~~---------~~ipvi~~g~i~~~~~~~~~~~~G--ad 101 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKR-VAEA---------VSIPVLVGGGVRSLEDATTLFRAG--AD 101 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHH-HHHH---------CSSCEEEESSCCSHHHHHHHHHHT--CS
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHH-HHHh---------cCCCEEEECCCCCHHHHHHHHHcC--CC
Confidence 56778888888887755554 2221 11111112222 2222 245678887765 67788888888 67
Q ss_pred EEeeCCcccc
Q 026913 83 AFGIGTYLVT 92 (231)
Q Consensus 83 ~fGvGT~l~~ 92 (231)
...+|+.+..
T Consensus 102 ~V~i~~~~~~ 111 (253)
T 1h5y_A 102 KVSVNTAAVR 111 (253)
T ss_dssp EEEESHHHHH
T ss_pred EEEEChHHhh
Confidence 8888887765
No 166
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=28.09 E-value=78 Score=32.02 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=29.7
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.++.|+++||+ +.+.+.++...| .|+..||+.+..
T Consensus 786 ~~ipvi~~GGI~s~~da~~~l~~G--a~~v~vg~~~l~ 821 (1025)
T 1gte_A 786 PGFPILATGGIDSAESGLQFLHSG--ASVLQVCSAVQN 821 (1025)
T ss_dssp TTCCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHT
T ss_pred CCCCEEEecCcCCHHHHHHHHHcC--CCEEEEeecccc
Confidence 35789999999 888888888888 588999998875
No 167
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=28.07 E-value=47 Score=28.71 Aligned_cols=36 Identities=22% Similarity=0.363 Sum_probs=30.8
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 211 ~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 246 (261)
T 1m6j_A 211 EATRIQYGGSVNPANCNELAKK-ADIDGFLVGGASLD 246 (261)
T ss_dssp HHSCEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred ccccEEEcCCcCHhhHHHHhcC-CCCCeeEecHHHhC
Confidence 3589999999999999999875 34999999987655
No 168
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=27.69 E-value=1e+02 Score=26.29 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=29.6
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCccc
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLV 91 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~ 91 (231)
.+++|+..|+.+++-+.+|..+ ..||++=||+.=.
T Consensus 198 ~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgASL 232 (244)
T 2v5b_A 198 AQLRILYGGSVTAKNARTLYQM-RDINGFLVGGASL 232 (244)
T ss_dssp HHCEEEECSCCCHHHHHHHHTS-TTCCEEEESGGGS
T ss_pred CcccEEEcCCCCHhHHHHHhcC-CCCCeeeechHHH
Confidence 3589999999999999999976 4589999997643
No 169
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=27.69 E-value=1.2e+02 Score=27.32 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=33.6
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCCcc
Q 026913 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAAL 99 (231)
Q Consensus 59 ~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p~l 99 (231)
.|+++||+ +...|.+.+..| .|+..||+.|..+...|.-
T Consensus 201 PVIAdGGI~~~~di~kALa~G--Ad~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALAFG--ADFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp EEEEESCCCSHHHHHHHHHTT--CSEEEESGGGTTBTTSSSC
T ss_pred CEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCccCCce
Confidence 89999999 589999998899 5899999999988776643
No 170
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=27.16 E-value=41 Score=27.85 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=29.3
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
+..|.+.||++++.+..+.+.| .|.|=||+.+..+.
T Consensus 168 ~~~i~v~gGI~~~~~~~~~~aG--ad~~VvG~~I~~a~ 203 (221)
T 3exr_A 168 GFRVSVTGGLSVDTLKLFEGVD--VFTFIAGRGITEAK 203 (221)
T ss_dssp TCEEEEESSCCGGGGGGGTTCC--CSEEEECHHHHTSS
T ss_pred CceEEEECCCCHHHHHHHHHCC--CCEEEECchhhCCC
Confidence 4578999999999998888778 57888998877643
No 171
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=26.62 E-value=2.2e+02 Score=23.03 Aligned_cols=63 Identities=3% Similarity=0.033 Sum_probs=35.7
Q ss_pred HHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEe
Q 026913 13 LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 13 ~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fG 85 (231)
.++++.|+.+. +-...+|.......++.+... +. +.-|+.+.+.+...+..+.+.|.|+..++
T Consensus 40 ~~a~~~g~~~~-~~~~~~~~~~~~~~~~~l~~~--------~v-dgiIi~~~~~~~~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 40 DIATMYKYNII-LSNSDQNMEKELHLLNTMLGK--------QV-DGIVFMGGNITDEHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp HHHHHTTCEEE-EEECTTCHHHHHHHHHHHHHT--------TC-SEEEECCSCCCHHHHHHHHHSSSCEEEES
T ss_pred HHHHHcCCEEE-EEeCCCCHHHHHHHHHHHHhC--------CC-CEEEEecCCCCHHHHHHHHhcCCCEEEEc
Confidence 44567788763 322334554443333333322 33 32455555677888888888888876664
No 172
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=26.23 E-value=65 Score=27.20 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=29.7
Q ss_pred CeEEEEeCCCC-HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~Ld-e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++.|++.+|++ .+.+.+....| .|++=|||.++..
T Consensus 205 ~~pi~vggGI~t~e~~~~~~~ag--AD~vVVGSai~~~ 240 (268)
T 1qop_A 205 AAPALQGFGISSPEQVSAAVRAG--AAGAISGSAIVKI 240 (268)
T ss_dssp CCCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhhh
Confidence 56799999998 99999976777 5889999999764
No 173
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=25.89 E-value=49 Score=25.86 Aligned_cols=35 Identities=9% Similarity=0.065 Sum_probs=26.1
Q ss_pred CCCCeEEEEeCCCCH------HHHHHHHhcCCcccEEeeCC
Q 026913 54 DFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGT 88 (231)
Q Consensus 54 g~~~v~I~~S~~Lde------~~i~~l~~~g~~id~fGvGT 88 (231)
+.+++-|++|+|-+. +.+..+.+.|..+-++|||+
T Consensus 107 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 107 SATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLG 147 (200)
T ss_dssp TSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEecc
Confidence 456788999988752 34667777888888888875
No 174
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=25.78 E-value=2e+02 Score=26.54 Aligned_cols=90 Identities=17% Similarity=0.251 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhcCCCccEEeeCC--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEE
Q 026913 7 NFCAVALALNDLGYKAVGIRLDS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAF 84 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDS--GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~f 84 (231)
+..+.+.+|.+.|.. .|=+|+ |....+. +..+.+.+. ++++.|++.|-.+.+.++.+.+.|+.....
T Consensus 229 ~~~~~a~~l~~aG~d--~I~id~a~g~~~~~~-~~v~~i~~~--------~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 229 DTGERVAALVAAGVD--VVVVDTAHGHSKGVI-ERVRWVKQT--------FPDVQVIGGNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp THHHHHHHHHHTTCS--EEEEECSCCSBHHHH-HHHHHHHHH--------CTTSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred chHHHHHHHhhcccc--eEEecccCCcchhHH-HHHHHHHHH--------CCCceEEEeeeCcHHHHHHHHHcCCCEEEE
Confidence 445667777777755 455555 4432222 222223332 246789999899999999999999754444
Q ss_pred eeC--Cccc----ccCCCCccceEEEEeE
Q 026913 85 GIG--TYLV----TCYAQAALGCVFKLVE 107 (231)
Q Consensus 85 GvG--T~l~----~~~~~p~l~~vyKlv~ 107 (231)
|+| +... ...+.|.+..++.+++
T Consensus 298 g~g~Gs~~~t~~~~g~g~p~~~~l~~v~~ 326 (490)
T 4avf_A 298 GIGPGSICTTRIVAGVGVPQISAIANVAA 326 (490)
T ss_dssp CSSCSTTCHHHHHTCBCCCHHHHHHHHHH
T ss_pred CCCCCcCCCccccCCCCccHHHHHHHHHH
Confidence 433 2222 2334555655555543
No 175
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=25.76 E-value=77 Score=28.34 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=29.0
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.++.|+++||+ +.+.+.++...| .|...|||.+..
T Consensus 276 ~~ipII~~GGI~s~~da~~~l~aG--Ad~V~vgra~l~ 311 (354)
T 4ef8_A 276 PGKLIFGCGGVYTGEDAFLHVLAG--ASMVQVGTALQE 311 (354)
T ss_dssp TTSEEEEESCCCSHHHHHHHHHHT--EEEEEECHHHHH
T ss_pred CCCCEEEECCcCCHHHHHHHHHcC--CCEEEEhHHHHH
Confidence 46899999998 477777777788 689999999876
No 176
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=25.23 E-value=76 Score=27.48 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=20.0
Q ss_pred eEEEEeCCCCHHHHHHHHhcCC-cccEEeeCCcccc
Q 026913 58 MSITASNDLNEETLDALNKQGH-EVDAFGIGTYLVT 92 (231)
Q Consensus 58 v~I~~S~~Lde~~i~~l~~~g~-~id~fGvGT~l~~ 92 (231)
+-|++||-.|.-+-.-.+.-|. +...||+||+|-+
T Consensus 120 ~iiv~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~ 155 (303)
T 2i6t_A 120 VLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDS 155 (303)
T ss_dssp EEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHH
T ss_pred EEEEcCChHHHHHHHHHHhcCCCHHHeeCCCCCchH
Confidence 4467888666322222222345 5678888888743
No 177
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=25.05 E-value=2.6e+02 Score=22.31 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhcCCCccEEeeCC----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCcc
Q 026913 7 NFCAVALALNDLGYKAVGIRLDS----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDS----GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~i 81 (231)
+.+++++++.+.|....-|+-.+ |.+. . ..+++ +.+. .++.+++.+++. ++.+..+.+.| .
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~-~-~~i~~-i~~~---------~~ipv~v~ggi~~~~~~~~~l~~G--a 97 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSN-H-ELLAE-VVGK---------LDVQVELSGGIRDDESLAAALATG--C 97 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCC-H-HHHHH-HHHH---------CSSEEEEESSCCSHHHHHHHHHTT--C
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCCh-H-HHHHH-HHHh---------cCCcEEEECCCCCHHHHHHHHHcC--C
Confidence 56778888888898877777432 3322 2 22222 2222 356788888876 56799998888 4
Q ss_pred cEEeeCCcccc
Q 026913 82 DAFGIGTYLVT 92 (231)
Q Consensus 82 d~fGvGT~l~~ 92 (231)
|..-+|+.+..
T Consensus 98 d~V~lg~~~l~ 108 (244)
T 2y88_A 98 ARVNVGTAALE 108 (244)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECchHhh
Confidence 67777876655
No 178
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=24.81 E-value=1.4e+02 Score=26.39 Aligned_cols=65 Identities=20% Similarity=0.295 Sum_probs=40.2
Q ss_pred HHHHHHHHhHhhCCCCCCCeEEEEeCCCCHH-----------HHHHHHhcCCcccEEeeCCcccccCCCC----------
Q 026913 39 ARKFFRTIEKEFGVPDFEKMSITASNDLNEE-----------TLDALNKQGHEVDAFGIGTYLVTCYAQA---------- 97 (231)
Q Consensus 39 ~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~-----------~i~~l~~~g~~id~fGvGT~l~~~~~~p---------- 97 (231)
++..|+.|.+ --++++++. |+-+.+ .++.|.++|.+||+.|+=+|+......+
T Consensus 161 i~~aF~~Ar~-----adP~a~L~~-NDyn~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~ 234 (348)
T 1w32_A 161 IDEAFRRARA-----ADPTAELYY-NDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKI 234 (348)
T ss_dssp HHHHHHHHHH-----HCTTSEEEE-EESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----hCCCCEEEe-cccccccCCchHHHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHH
Confidence 3455555533 125778765 555422 2566777899999999988886532211
Q ss_pred ---ccceEEEEeEEC
Q 026913 98 ---ALGCVFKLVEIN 109 (231)
Q Consensus 98 ---~l~~vyKlv~~~ 109 (231)
.++.-.-++|++
T Consensus 235 a~~~~Gl~i~ITElD 249 (348)
T 1w32_A 235 VALSPTLKIKITELD 249 (348)
T ss_dssp HTTCSSCEEEEEEEE
T ss_pred hcccCCCeEEEEeCc
Confidence 556666677775
No 179
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=24.54 E-value=59 Score=27.99 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=30.4
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++++|+..|+.+..-+.+|..+ ..+|++-||+.=..
T Consensus 206 ~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgASL~ 241 (255)
T 3qst_A 206 NKVRILYGGSVKPNNCNELAAC-PDVDGFLVGGASLE 241 (255)
T ss_dssp HHCEEEECSCCCTTTHHHHHHS-TTCCEEEECGGGGS
T ss_pred CcccEEEcCCcCHhHHHHHhcC-CCCCEEEeeHHHhh
Confidence 4689999999999999999875 34999999986544
No 180
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=24.28 E-value=1.9e+02 Score=20.44 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=28.3
Q ss_pred EEeeCCCCh-HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHH
Q 026913 24 GIRLDSGDL-AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEET 70 (231)
Q Consensus 24 gVRlDSGDl-~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~ 70 (231)
-||..+|-- ..-..+..+.|..+ |..+|+|..|..-||..
T Consensus 22 dirvstgkeleralqelekalara-------garnvqitisaendeqa 62 (96)
T 2jvf_A 22 DIRVSTGKELERALQELEKALARA-------GARNVQITISAENDEQA 62 (96)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHHH-------TCSEEEEEEECSSHHHH
T ss_pred EEEEcccHHHHHHHHHHHHHHHhc-------cccceEEEEEecChHHH
Confidence 688889873 33333455556555 88999999999888753
No 181
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=24.17 E-value=52 Score=28.66 Aligned_cols=36 Identities=17% Similarity=0.305 Sum_probs=30.4
Q ss_pred CCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 56 ~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++++|+..|+.+..-+.+|..+ ..+|++-||+.-..
T Consensus 225 ~~vrILYGGSV~~~N~~el~~~-~diDG~LVGgASL~ 260 (271)
T 3krs_A 225 SNLRIIYGGSVTPDNCNELIKC-ADIDGFLVGGASLK 260 (271)
T ss_dssp HHCCEEECSCCCTTTHHHHHHS-TTCCEEEESGGGGS
T ss_pred CCccEEEcCCcCHHHHHHHhcC-CCCCEEEeeHHhhh
Confidence 4689999999999999999875 34999999986544
No 182
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=24.17 E-value=3.1e+02 Score=25.18 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=28.5
Q ss_pred CeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
++.||++||+ +.+.+.+....| .|..+|||.++.
T Consensus 373 ~iPVIg~GGI~s~~DA~e~l~aG--Ad~Vqigrall~ 407 (443)
T 1tv5_A 373 QIPIIASGGIFSGLDALEKIEAG--ASVCQLYSCLVF 407 (443)
T ss_dssp CSCEEEESSCCSHHHHHHHHHTT--EEEEEESHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHh
Confidence 6789999997 678888888888 689999999764
No 183
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=24.10 E-value=2.1e+02 Score=26.76 Aligned_cols=75 Identities=12% Similarity=0.204 Sum_probs=45.7
Q ss_pred HHHHHHHHhcCCCccEE------eeCCCCh-HHHHHHHHHHHHHHhHhhCCCCC-CCeEEEEeCCCC-HHHHHHHHhcCC
Q 026913 9 CAVALALNDLGYKAVGI------RLDSGDL-AYLSCEARKFFRTIEKEFGVPDF-EKMSITASNDLN-EETLDALNKQGH 79 (231)
Q Consensus 9 I~va~~l~~~g~~~~gV------RlDSGDl-~~ls~~~r~~ld~~~~~l~~~g~-~~v~I~~S~~Ld-e~~i~~l~~~g~ 79 (231)
.+.|+.+.+.|....-| .+|++.. ..+..++++.+.+. ++ .++.||++||+- -..+.+.+..|
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~-------~~~~~ipVia~GGI~~g~Dv~kaLalG- 425 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQR-------NLKDKLEVFVDGGVRRGTDVLKALCLG- 425 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTT-------TCBTTBEEEEESSCCSHHHHHHHHHHT-
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhh-------ccCCCcEEEEECCCCCHHHHHHHHHcC-
Confidence 34566677777554333 3565543 22233344444332 32 368999999985 55666666678
Q ss_pred cccEEeeCCcccc
Q 026913 80 EVDAFGIGTYLVT 92 (231)
Q Consensus 80 ~id~fGvGT~l~~ 92 (231)
.|+-+||+.+..
T Consensus 426 -AdaV~iGr~~l~ 437 (511)
T 1kbi_A 426 -AKGVGLGRPFLY 437 (511)
T ss_dssp -CSEEEECHHHHH
T ss_pred -CCEEEECHHHHH
Confidence 589999997765
No 184
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=24.10 E-value=85 Score=25.83 Aligned_cols=70 Identities=16% Similarity=0.071 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcCCCccEEee-C-----CCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCC
Q 026913 7 NFCAVALALNDLGYKAVGIRL-D-----SGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGH 79 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRl-D-----SGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~ 79 (231)
+.+++++++.+.|....-|+= | +|....+.++ +.+. .++.|+++|+++ .+.+.++.+.|
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~----i~~~---------~~iPvi~~ggi~~~~~i~~~~~~G- 96 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF----VRPL---------TTLPIIASGGAGKMEHFLEAFLAG- 96 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHH----HGGG---------CCSCEEEESCCCSTHHHHHHHHHT-
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHH----HHHh---------cCCCEEEECCCCCHHHHHHHHHcC-
Confidence 356778888888876655532 1 1221222222 2221 356788898876 57788887778
Q ss_pred cccEEeeCCccc
Q 026913 80 EVDAFGIGTYLV 91 (231)
Q Consensus 80 ~id~fGvGT~l~ 91 (231)
+|+.-+|+.+.
T Consensus 97 -ad~v~lg~~~~ 107 (266)
T 2w6r_A 97 -ADKALAASVFH 107 (266)
T ss_dssp -CSEEECCCCC-
T ss_pred -CcHhhhhHHHH
Confidence 68888999887
No 185
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=23.90 E-value=2.3e+02 Score=22.82 Aligned_cols=64 Identities=11% Similarity=-0.041 Sum_probs=36.5
Q ss_pred HHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC--HHHHHHHHhcCCcccEEe
Q 026913 13 LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (231)
Q Consensus 13 ~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld--e~~i~~l~~~g~~id~fG 85 (231)
.++++.|+.+.-+-...+|.......++.++.. +. +.-|+.+.+.+ ...+..+.+.|.|+..++
T Consensus 28 ~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~--------~v-dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 28 DAAQALNVTVEYRGAAQYDIQEQITVLEQAIAK--------NP-AGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHH--------CC-SEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHh--------CC-CEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 345567887743233446765554444444443 33 32455444443 677888888898876654
No 186
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=23.77 E-value=2.3e+02 Score=25.29 Aligned_cols=65 Identities=22% Similarity=0.200 Sum_probs=40.5
Q ss_pred HHHHHHHhcCCCccEEeeCC--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEe
Q 026913 10 AVALALNDLGYKAVGIRLDS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (231)
Q Consensus 10 ~va~~l~~~g~~~~gVRlDS--GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fG 85 (231)
+.+.+|.+.|.. .|=+|| |+...+... .+.+.+. ++++.|++.+-.+.+.++.+.+.|+.....|
T Consensus 111 ~~~~~lieaGvd--~I~idta~G~~~~~~~~-I~~ik~~--------~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 111 ERVKALVEAGVD--VLLIDSSHGHSEGVLQR-IRETRAA--------YPHLEIIGGNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHTTCS--EEEEECSCTTSHHHHHH-HHHHHHH--------CTTCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhCCCC--EEEEeCCCCCCHHHHHH-HHHHHHh--------cCCCceEeeeeCCHHHHHHHHHcCCCEEEEe
Confidence 345555666654 566666 554433322 2233332 2567888888999999999999997544444
No 187
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.76 E-value=1.2e+02 Score=24.20 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=21.8
Q ss_pred eEEEEeCCC--CHHH----HHHHHhcCCcccEEeeCCcc
Q 026913 58 MSITASNDL--NEET----LDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 58 v~I~~S~~L--de~~----i~~l~~~g~~id~fGvGT~l 90 (231)
+-|+.++++ |+.. ++.+.+.|..+...|+|+.-
T Consensus 109 iiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~ 147 (192)
T 2x5n_A 109 IVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ 147 (192)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC-
T ss_pred EEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCC
Confidence 445666666 3443 44555678899999999864
No 188
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=23.71 E-value=2e+02 Score=24.20 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=25.5
Q ss_pred eEEEEeCCCCH---H----HHHHHHhcCCcccEEeeCCcccccCC
Q 026913 58 MSITASNDLNE---E----TLDALNKQGHEVDAFGIGTYLVTCYA 95 (231)
Q Consensus 58 v~I~~S~~Lde---~----~i~~l~~~g~~id~fGvGT~l~~~~~ 95 (231)
+.|++|||+.. + .+....+.|+ ++.-+|.++.++.+
T Consensus 197 ~pV~asGGi~~~~~~~~l~~i~~~~~aGA--~GvsvgraI~~~~d 239 (263)
T 1w8s_A 197 VPVLMSGGPKTKTEEDFLKQVEGVLEAGA--LGIAVGRNVWQRRD 239 (263)
T ss_dssp SCEEEECCSCCSSHHHHHHHHHHHHHTTC--CEEEESHHHHTSTT
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHHHcCC--eEEEEehhhcCCcC
Confidence 47999999963 3 4444447786 58888988888643
No 189
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=23.51 E-value=1e+02 Score=26.82 Aligned_cols=46 Identities=15% Similarity=0.036 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcc
Q 026913 37 CEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYL 90 (231)
Q Consensus 37 ~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l 90 (231)
..+|+.|.+. + -..++|+..|+.+++-+.+|..+ ..||++=||+.=
T Consensus 213 ~~IR~~l~~~---~----a~~~rIlYGGSV~~~N~~el~~~-~dIDG~LVGgAS 258 (272)
T 4g1k_A 213 AFLRGRLAAK---G----AGHVSLLYGGSVKADNAAELFGQ-PDIDGGLIGGAS 258 (272)
T ss_dssp HHHHHHHHHH---T----CTTSCEEECSCCCTTTHHHHHTS-TTCCEEEECGGG
T ss_pred HHHHHHHHHh---h----cCCceEEEcCCcCHhHHHHHhcC-CCCCEEEechHh
Confidence 3366666654 2 35789999999999999999876 458999999654
No 190
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=23.51 E-value=72 Score=27.54 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=29.3
Q ss_pred CeEEEEeCCC-CHHHHHHHHh-cCCcccEEeeCCccccc
Q 026913 57 KMSITASNDL-NEETLDALNK-QGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 57 ~v~I~~S~~L-de~~i~~l~~-~g~~id~fGvGT~l~~~ 93 (231)
++.|+++||+ +.+.+.++.+ .| .|+..||+.+..+
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~~g--ad~V~iGR~~l~~ 219 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEESG--CDGLLVARGAIGR 219 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHHC--CSEEEESGGGTTC
T ss_pred CCeEEEECCcCCHHHHHHHHHcCC--CCEEEECHHHHhC
Confidence 5689999998 8899999887 46 6899999988774
No 191
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=22.93 E-value=1.1e+02 Score=26.71 Aligned_cols=37 Identities=14% Similarity=0.279 Sum_probs=26.4
Q ss_pred CCeEEEEeCCCC------------HHHHHHHHhcCCcccEEeeCCccccc
Q 026913 56 EKMSITASNDLN------------EETLDALNKQGHEVDAFGIGTYLVTC 93 (231)
Q Consensus 56 ~~v~I~~S~~Ld------------e~~i~~l~~~g~~id~fGvGT~l~~~ 93 (231)
++++++.. +-+ .+.|+.|.++|.++|+.|+=+|+...
T Consensus 163 P~a~L~~N-dyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~ 211 (313)
T 1v0l_A 163 PSAKLCYN-DYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSG 211 (313)
T ss_dssp TTSEEEEE-ESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTT
T ss_pred CCCEEEEe-ccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCC
Confidence 67788864 322 24556677789999999998887653
No 192
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=22.83 E-value=1.2e+02 Score=27.99 Aligned_cols=40 Identities=10% Similarity=0.189 Sum_probs=30.5
Q ss_pred CCeEEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccccCCCC
Q 026913 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (231)
Q Consensus 56 ~~v~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~~~~~p 97 (231)
.++.||++||+ +...|.+....| .++-+|||.++.+...|
T Consensus 351 ~~ipvia~GGi~~~~di~kAlalG--A~~V~iG~~~~~~~E~~ 391 (503)
T 1me8_A 351 IYIPVCSDGGIVYDYHMTLALAMG--ADFIMLGRYFARFEESP 391 (503)
T ss_dssp EECCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSS
T ss_pred CCceEEEeCCCCCHHHHHHHHHcC--CCEEEECchhhccccCC
Confidence 35789998887 467777777789 47899999998765554
No 193
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=22.80 E-value=60 Score=27.94 Aligned_cols=51 Identities=12% Similarity=0.105 Sum_probs=36.4
Q ss_pred HHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 38 EARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 38 ~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.+|+.|.+. ++-.--++++|+..|+.+++-+.+|..+ ..+|++-||+.-..
T Consensus 192 ~IR~~l~~~---~~~~~a~~~rIlYGGSV~~~N~~~l~~~-~diDG~LVGgASL~ 242 (254)
T 3m9y_A 192 FVRQTIADL---SSKEVSEATRIQYGGSVKPNNIKEYMAQ-TDIDGALVGGASLK 242 (254)
T ss_dssp HHHHHHHHH---SCHHHHTTSEEEECSCCCTTTHHHHHTS-TTCCEEEESGGGSS
T ss_pred HHHHHHHHh---cChhhcCCccEEEcCCcCHHHHHHHHcC-CCCCeEEeeHHhhC
Confidence 367777653 1100014789999999999999999865 34999999986544
No 194
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=22.61 E-value=2.4e+02 Score=22.72 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhcCCCccEEeeCC----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHHhcCCcc
Q 026913 7 NFCAVALALNDLGYKAVGIRLDS----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (231)
Q Consensus 7 naI~va~~l~~~g~~~~gVRlDS----GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Ld-e~~i~~l~~~g~~i 81 (231)
+.+++++++.+.|..+.-|+-.+ |.+.. ..++++ .+. .++.+++.+++. ++.+..+.+.| .
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i-~~~---------~~ipv~v~ggI~~~~~~~~~l~~G--a 98 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEV-AQA---------MDIKVELSGGIRDDDTLAAALATG--C 98 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHH-HHH---------CSSEEEEESSCCSHHHHHHHHHTT--C
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHH-HHh---------cCCcEEEECCcCCHHHHHHHHHcC--C
Confidence 56778888888898887777533 33222 222322 222 356788888876 56788888888 4
Q ss_pred cEEeeCCcccc
Q 026913 82 DAFGIGTYLVT 92 (231)
Q Consensus 82 d~fGvGT~l~~ 92 (231)
|..-+|+.+..
T Consensus 99 d~V~lg~~~l~ 109 (244)
T 1vzw_A 99 TRVNLGTAALE 109 (244)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECchHhh
Confidence 67778887655
No 195
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=22.47 E-value=41 Score=28.87 Aligned_cols=54 Identities=19% Similarity=0.308 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
....+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 183 vh~~IR~~l~~~---~~~~va~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 236 (247)
T 1ney_A 183 IHASIRKFLASK---LGDKAASELRILYGGSANGSNAVTFKDK-ADVDGFLVGGASLK 236 (247)
T ss_dssp HHHHHHHHHHHH---HCHHHHHHCCEEEESSCCTTTGGGGTTC-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHh---cChhhcccceEEEcCCcCHhHHHHHHcC-CCCCeeEeehHHHH
Confidence 333466666552 1100013589999999999999999865 34999999987654
No 196
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=22.47 E-value=94 Score=27.78 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=27.2
Q ss_pred EEEEeCCC-CHHHHHHHHhcCCcccEEeeCCcccc
Q 026913 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (231)
Q Consensus 59 ~I~~S~~L-de~~i~~l~~~g~~id~fGvGT~l~~ 92 (231)
.|++|||+ +...+.++...| .++.+||+.+..
T Consensus 280 pVia~GGI~~~~dv~kal~~G--AdaV~iGr~~l~ 312 (380)
T 1p4c_A 280 PVLIDSGFRRGSDIVKALALG--AEAVLLGRATLY 312 (380)
T ss_dssp CEEECSSCCSHHHHHHHHHTT--CSCEEESHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHhC--CcHhhehHHHHH
Confidence 79999998 677888888888 589999998865
No 197
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=22.14 E-value=2.7e+02 Score=23.48 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCCccEEeeCCCChHHHH-HHHHHHHHHHhHhhCCCCCCCeEEEEe-CCCCHHHHHHHHhcCCcccE
Q 026913 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLS-CEARKFFRTIEKEFGVPDFEKMSITAS-NDLNEETLDALNKQGHEVDA 83 (231)
Q Consensus 6 ~naI~va~~l~~~g~~~~gVRlDSGDl~~ls-~~~r~~ld~~~~~l~~~g~~~v~I~~S-~~Lde~~i~~l~~~g~~id~ 83 (231)
...++.++++.+.|.+ .|-+=+|....+. ..+.++++.+... ++.|.+| +.++++.+..|.+.|. +.
T Consensus 87 eei~~~i~~~~~~g~~--~i~~~gGe~p~~~~~~~~~li~~i~~~-------~~~i~~s~g~l~~e~l~~L~~ag~--~~ 155 (348)
T 3iix_A 87 EEIVERARLAVQFGAK--TIVLQSGEDPYXMPDVISDIVKEIKKM-------GVAVTLSLGEWPREYYEKWKEAGA--DR 155 (348)
T ss_dssp HHHHHHHHHHHHTTCS--EEEEEESCCGGGTTHHHHHHHHHHHTT-------SCEEEEECCCCCHHHHHHHHHHTC--CE
T ss_pred HHHHHHHHHHHHCCCC--EEEEEeCCCCCccHHHHHHHHHHHHhc-------CceEEEecCCCCHHHHHHHHHhCC--CE
Confidence 3445566666666654 6666667623333 5667777766321 4566665 5679999999999884 45
Q ss_pred EeeC
Q 026913 84 FGIG 87 (231)
Q Consensus 84 fGvG 87 (231)
+-+|
T Consensus 156 v~i~ 159 (348)
T 3iix_A 156 YLLR 159 (348)
T ss_dssp EECC
T ss_pred Eeee
Confidence 5444
No 198
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=21.93 E-value=99 Score=23.71 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=23.7
Q ss_pred CCCCeEEEEeCCCC----HHHHHHHHhcCCcccEEeeCCc
Q 026913 54 DFEKMSITASNDLN----EETLDALNKQGHEVDAFGIGTY 89 (231)
Q Consensus 54 g~~~v~I~~S~~Ld----e~~i~~l~~~g~~id~fGvGT~ 89 (231)
+.+++-|++++|-. ...+..+.+.|..+.++|||..
T Consensus 107 ~~~~~vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~~ 146 (189)
T 1atz_A 107 GASKAVVILVTDVSVDSVDAAADAARSNRVTVFPIGIGDR 146 (189)
T ss_dssp TSEEEEEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESSS
T ss_pred CCCcEEEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCCc
Confidence 33454566666543 3456667778888889999974
No 199
>3o6p_A Peptide ABC transporter, peptide-binding protein; structural genomics, PSI-2, protein structure initiative; 1.65A {Enterococcus faecalis}
Probab=21.80 E-value=74 Score=25.34 Aligned_cols=39 Identities=18% Similarity=0.373 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHH
Q 026913 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALN 75 (231)
Q Consensus 36 s~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~ 75 (231)
..+++++|+++||..|.+++ .++|..+++-+...+.++.
T Consensus 80 ~~kAk~LL~eaG~~~g~~~l-~l~l~~~~~~~~~~~a~~i 118 (229)
T 3o6p_A 80 TKKAKEYWEKAKKELGISTL-TMDILSSDADSSKKTVEFV 118 (229)
T ss_dssp HHHHHHHHHHHHHHHTCSCE-EEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcccCCCce-EEEEEeCCChHHHHHHHHH
Confidence 56899999999988754333 4567766542233444443
No 200
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=21.75 E-value=2.5e+02 Score=25.53 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHhcCCcc
Q 026913 8 FCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV 81 (231)
Q Consensus 8 aI~va~~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~~g~~i 81 (231)
+.+.+.+|.+.|.....|=...|++.... +..+.+.+. + +++.|++.+..+.+.+..+.+.|+..
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~-e~i~~i~~~---~-----p~~pvi~g~~~t~e~a~~l~~~G~d~ 302 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVI-ETLEMIKAD---Y-----PDLPVVAGNVATPEGTEALIKAGADA 302 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHH-HHHHHHHHH---C-----TTSCEEEEEECSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHH-HHHHHHHHH---C-----CCceEEeCCcCCHHHHHHHHHcCCCE
Confidence 44556667777766544433346543322 223333332 2 34677888999999999999999643
No 201
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=21.50 E-value=28 Score=28.25 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=29.6
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
+..|++.||++++.+.++.+.| .|.+-||+.+..+.
T Consensus 163 ~~~i~v~GGI~~~~~~~~~~aG--ad~ivvG~~I~~a~ 198 (216)
T 1q6o_A 163 GFKVTVTGGLALEDLPLFKGIP--IHVFIAGRSIRDAA 198 (216)
T ss_dssp TCEEEEESSCCGGGGGGGTTSC--CSEEEESHHHHTSS
T ss_pred CCcEEEECCcChhhHHHHHHcC--CCEEEEeehhcCCC
Confidence 4569999999999998888888 56888999887643
No 202
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=21.37 E-value=1.9e+02 Score=23.71 Aligned_cols=63 Identities=16% Similarity=0.063 Sum_probs=34.9
Q ss_pred HHHhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCH--HHHHHHHhcCCcccEEe
Q 026913 14 ALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNE--ETLDALNKQGHEVDAFG 85 (231)
Q Consensus 14 ~l~~~g~~~~gVRlDSGDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde--~~i~~l~~~g~~id~fG 85 (231)
++++.|+.+.-+-.+.+|.......++.++.. +. +.-|+.+.+.+. ..+..+.+.|.|+..++
T Consensus 25 ~~~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~--------~v-dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 25 AGKALGVDTKFFVPQKEDINAQLQMLESFIAE--------GV-NGIAIAPSDPTAVIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp HHHHHTCEEEEECCSSSCHHHHHHHHHHHHHT--------TC-SEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHcCCEEEEECCCCCCHHHHHHHHHHHHHc--------CC-CEEEEeCCChHHHHHHHHHHHHCCCeEEEeC
Confidence 35566876632223456776655555555433 32 324444444442 56777777888876654
No 203
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=20.93 E-value=3.2e+02 Score=21.69 Aligned_cols=61 Identities=7% Similarity=0.084 Sum_probs=34.3
Q ss_pred HHHhcCCCccEEeeCC-CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHHh-cCCcccEEe
Q 026913 14 ALNDLGYKAVGIRLDS-GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK-QGHEVDAFG 85 (231)
Q Consensus 14 ~l~~~g~~~~gVRlDS-GDl~~ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~~-~g~~id~fG 85 (231)
++++.|+.+. + .++ .|.......++.++.. +. +.-|+.+.+.+...+..+.+ .|.|+..++
T Consensus 46 ~~~~~g~~~~-~-~~~~~~~~~~~~~~~~l~~~--------~v-dgii~~~~~~~~~~~~~l~~~~~iPvV~~~ 108 (296)
T 3brq_A 46 MAEEKGRQLL-L-ADGKHSAEEERQAIQYLLDL--------RC-DAIMIYPRFLSVDEIDDIIDAHSQPIMVLN 108 (296)
T ss_dssp HHHHTTCEEE-E-ECCTTSHHHHHHHHHHHHHT--------TC-SEEEEECSSSCHHHHHHHHHTCSSCEEEES
T ss_pred HHHHCCCEEE-E-EeCCCCHHHHHHHHHHHHhc--------CC-CEEEEecCCCChHHHHHHHhcCCCCEEEEc
Confidence 3556677653 2 344 4554443333333322 32 33566666677777888877 787766554
No 204
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=20.66 E-value=49 Score=28.09 Aligned_cols=50 Identities=24% Similarity=0.341 Sum_probs=39.4
Q ss_pred cEEeeCCCChHHHHHHHHHHHHHH--hHhhCCCC-----CCCeEEEEeCCCCHHHHHHHHhc
Q 026913 23 VGIRLDSGDLAYLSCEARKFFRTI--EKEFGVPD-----FEKMSITASNDLNEETLDALNKQ 77 (231)
Q Consensus 23 ~gVRlDSGDl~~ls~~~r~~ld~~--~~~l~~~g-----~~~v~I~~S~~Lde~~i~~l~~~ 77 (231)
.=||+=+||..|=..++..+++++ ..++|.+| ++. .|.+|.+.+++|.+.
T Consensus 59 vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~-----dg~iD~~~~~~Li~~ 115 (224)
T 2bdq_A 59 VMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTS-----NNHIDTEAIEQLLPA 115 (224)
T ss_dssp EECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCT-----TSSBCHHHHHHHHHH
T ss_pred EEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECC-----CCCcCHHHHHHHHHH
Confidence 468999999999888888888876 55677776 233 578999999999864
No 205
>3abq_B Ethanolamine ammonia-lyase light chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_B* 3abr_B* 3abs_B* 3any_B* 3ao0_B*
Probab=20.46 E-value=21 Score=31.82 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHH
Q 026913 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLD 72 (231)
Q Consensus 35 ls~~~r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~ 72 (231)
|+.+.++.|.+. ...-.+|.|++|+||+-..|.
T Consensus 154 Ls~~s~~~L~~~-----~~~~~DV~iVIaDGLSa~Ai~ 186 (306)
T 3abq_B 154 LCAEAVEALKAQ-----CVANPDVQVVISDGLSTDAIT 186 (306)
T ss_dssp BCHHHHHHHHHH-----SCSSCSEEEEEECTTCSHHHH
T ss_pred CCHHHHHHHHHh-----cCCCCCEEEEEeCCCCHHHHH
Confidence 344566677653 112368999999999987664
No 206
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=20.16 E-value=1e+02 Score=26.76 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=27.1
Q ss_pred ChHHHHHHH----HHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHH
Q 026913 31 DLAYLSCEA----RKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALN 75 (231)
Q Consensus 31 Dl~~ls~~~----r~~ld~~~~~l~~~g~~~v~I~~S~~Lde~~i~~l~ 75 (231)
|+.....+. |+.+.+. |++.+-|-+|||+|=-....|.
T Consensus 25 ~~~~~i~~~v~~L~d~l~~~-------g~~~vvvglSGGiDSal~a~La 66 (285)
T 3dpi_A 25 DARDEAERRIGFVADYLRTA-------GLRACVLGISGGIDSSTAGRLA 66 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-------TCCEEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHc-------CCCcEEEEccCChhHHHHHHHH
Confidence 566655554 4444554 8889999999999988875553
No 207
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=20.00 E-value=1.1e+02 Score=26.48 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=29.1
Q ss_pred CeEEEEeCCCCHHHHHHHHhcCCcccEEeeCCcccccC
Q 026913 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (231)
Q Consensus 57 ~v~I~~S~~Lde~~i~~l~~~g~~id~fGvGT~l~~~~ 94 (231)
-+.|.-||=-+.+.+..+.+.| +|+|=||++|+.+.
T Consensus 205 ~~~VsESGI~t~~dv~~l~~~G--~~a~LVGealmr~~ 240 (258)
T 4a29_A 205 VVKVAKLGISERNEIEELRKLG--VNAFLISSSLMRNP 240 (258)
T ss_dssp SEEEEEESSCCHHHHHHHHHTT--CCEEEECHHHHHCT
T ss_pred CEEEEcCCCCCHHHHHHHHHCC--CCEEEECHHHhCCC
Confidence 3455556666899999999999 78999999999854
Done!