Query 026920
Match_columns 231
No_of_seqs 171 out of 695
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 03:05:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026920.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026920hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 87.2 0.65 2.2E-05 36.8 4.5 37 100-150 3-43 (200)
2 4hf7_A Putative acylhydrolase; 84.7 0.33 1.1E-05 39.3 1.6 15 126-140 25-39 (209)
3 3hp4_A GDSL-esterase; psychrot 81.2 0.41 1.4E-05 37.1 0.8 15 126-140 1-15 (185)
4 3rjt_A Lipolytic protein G-D-S 77.6 0.8 2.8E-05 35.8 1.4 15 126-140 7-21 (216)
5 3mil_A Isoamyl acetate-hydroly 70.7 1.2 4.2E-05 35.6 0.9 15 125-139 1-15 (240)
6 1ivn_A Thioesterase I; hydrola 70.6 1.2 4.2E-05 34.7 0.9 14 127-140 1-14 (190)
7 1yzf_A Lipase/acylhydrolase; s 68.6 1.5 5E-05 33.7 0.9 13 128-140 2-14 (195)
8 2q0q_A ARYL esterase; SGNH hyd 66.1 1.6 5.6E-05 34.4 0.7 13 128-140 3-15 (216)
9 2hsj_A Putative platelet activ 65.9 2.3 7.8E-05 33.6 1.6 16 126-141 33-48 (214)
10 1fxw_F Alpha2, platelet-activa 62.4 3.1 0.00011 33.7 1.8 23 119-141 29-53 (229)
11 3dci_A Arylesterase; SGNH_hydr 62.3 2.1 7.2E-05 34.8 0.7 13 128-140 24-36 (232)
12 3dc7_A Putative uncharacterize 62.1 2.6 9E-05 33.9 1.3 17 124-140 18-34 (232)
13 1vjg_A Putative lipase from th 61.7 1.9 6.5E-05 34.4 0.3 17 124-140 17-33 (218)
14 1es9_A PAF-AH, platelet-activa 59.4 3.5 0.00012 33.3 1.6 16 126-141 37-52 (232)
15 3p94_A GDSL-like lipase; serin 58.2 3.4 0.00012 32.1 1.2 14 129-142 24-37 (204)
16 3bzw_A Putative lipase; protei 57.0 3.6 0.00012 34.4 1.3 16 125-140 24-39 (274)
17 2vpt_A Lipolytic enzyme; ester 54.9 3 0.0001 33.4 0.4 13 128-140 6-18 (215)
18 2w9x_A AXE2A, CJCE2B, putative 50.0 5.7 0.00019 35.3 1.5 15 126-140 141-155 (366)
19 2waa_A Acetyl esterase, xylan 48.5 4.9 0.00017 35.4 0.8 15 126-140 131-145 (347)
20 2wao_A Endoglucanase E; plant 47.5 5.4 0.00018 34.9 0.9 15 126-140 121-135 (341)
21 3t6g_B Breast cancer anti-estr 43.5 1.2 4.3E-05 38.5 -3.7 16 125-140 144-159 (229)
22 3grf_A Ornithine carbamoyltran 43.1 12 0.00042 33.7 2.5 27 124-151 158-184 (328)
23 4amu_A Ornithine carbamoyltran 41.1 14 0.00047 33.9 2.6 26 125-151 178-203 (365)
24 1k7c_A Rhamnogalacturonan acet 40.3 8.8 0.0003 31.5 1.1 12 129-140 2-13 (233)
25 3tpf_A Otcase, ornithine carba 40.0 14 0.00048 32.9 2.4 25 125-151 143-168 (307)
26 3r7f_A Aspartate carbamoyltran 39.8 13 0.00045 33.1 2.2 27 125-151 145-171 (304)
27 1vcc_A DNA topoisomerase I; DN 39.8 3.7 0.00013 29.7 -1.1 15 128-142 55-70 (77)
28 2o14_A Hypothetical protein YX 38.6 11 0.00036 33.9 1.4 16 125-140 160-175 (375)
29 3csu_A Protein (aspartate carb 36.3 17 0.00058 32.5 2.3 28 124-151 151-178 (310)
30 3skv_A SSFX3; jelly roll, GDSL 35.5 11 0.00038 34.3 1.0 13 127-139 185-197 (385)
31 1pg5_A Aspartate carbamoyltran 35.0 17 0.00059 32.2 2.1 28 124-151 146-173 (299)
32 3sds_A Ornithine carbamoyltran 34.5 18 0.0006 33.0 2.2 24 126-151 187-210 (353)
33 1oth_A Protein (ornithine tran 33.1 18 0.00061 32.5 1.9 26 124-151 152-177 (321)
34 3q98_A Transcarbamylase; rossm 33.1 20 0.00069 33.1 2.4 27 125-151 189-220 (399)
35 4ekn_B Aspartate carbamoyltran 32.6 21 0.00073 31.7 2.3 27 125-151 149-175 (306)
36 3gd5_A Otcase, ornithine carba 32.0 21 0.00071 32.1 2.2 24 125-150 155-178 (323)
37 1ml4_A Aspartate transcarbamoy 31.9 19 0.00066 32.0 2.0 27 125-151 153-179 (308)
38 2yfk_A Aspartate/ornithine car 31.8 22 0.00075 33.1 2.4 27 125-151 186-217 (418)
39 4ep1_A Otcase, ornithine carba 31.8 21 0.00071 32.4 2.2 25 125-151 177-201 (340)
40 4f2g_A Otcase 1, ornithine car 31.6 21 0.00073 31.8 2.2 26 124-151 151-176 (309)
41 4a8t_A Putrescine carbamoyltra 30.8 22 0.00076 32.1 2.2 26 124-151 172-197 (339)
42 4a8p_A Putrescine carbamoyltra 29.0 25 0.00085 32.1 2.2 26 124-151 150-175 (355)
43 2qru_A Uncharacterized protein 25.8 54 0.0018 26.7 3.6 23 127-149 95-117 (274)
44 3d6n_B Aspartate carbamoyltran 25.7 32 0.0011 30.4 2.2 28 124-151 143-170 (291)
45 1duv_G Octase-1, ornithine tra 25.4 37 0.0013 30.6 2.6 27 124-151 152-178 (333)
46 2i6u_A Otcase, ornithine carba 24.4 39 0.0013 30.0 2.6 27 124-151 145-171 (307)
47 1dxh_A Ornithine carbamoyltran 24.4 37 0.0013 30.6 2.4 27 124-151 152-178 (335)
48 1vlv_A Otcase, ornithine carba 24.0 41 0.0014 30.2 2.6 27 124-151 164-190 (325)
49 2ef0_A Ornithine carbamoyltran 23.8 34 0.0011 30.4 2.0 26 124-151 151-176 (301)
50 1pvv_A Otcase, ornithine carba 23.2 37 0.0013 30.3 2.2 26 124-151 152-177 (315)
51 2w37_A Ornithine carbamoyltran 23.0 43 0.0015 30.6 2.6 27 124-151 173-199 (359)
52 4fe3_A Cytosolic 5'-nucleotida 22.7 31 0.0011 29.1 1.5 14 126-139 229-242 (297)
53 4h31_A Otcase, ornithine carba 22.6 44 0.0015 30.2 2.6 26 125-151 179-204 (358)
54 1esc_A Esterase; 2.10A {Strept 21.7 24 0.00081 30.1 0.6 13 128-140 6-18 (306)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=87.24 E-value=0.65 Score=36.79 Aligned_cols=37 Identities=16% Similarity=0.609 Sum_probs=25.1
Q ss_pred ccccc--eeecC--CCCCCCCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhc
Q 026920 100 IYLKY--RWQPF--SCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIH 150 (231)
Q Consensus 100 ~y~~W--rWqP~--gC~Lprfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~ 150 (231)
+|..| .|-|. .=++| ||+|+|||++..-...|...|.
T Consensus 3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l~ 43 (200)
T 4h08_A 3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAALK 43 (200)
T ss_dssp SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHTT
T ss_pred ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHhc
Confidence 67777 47774 34554 6999999999874444555553
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=84.69 E-value=0.33 Score=39.26 Aligned_cols=15 Identities=20% Similarity=0.720 Sum_probs=13.1
Q ss_pred cCCceEEecchhhHH
Q 026920 126 RGKKIMFVGDSLSLN 140 (231)
Q Consensus 126 rgkri~FVGDSl~Rn 140 (231)
.+++|+|+|||+++.
T Consensus 25 ~~~~Iv~~GDSit~g 39 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG 39 (209)
T ss_dssp GGCCEEEEESHHHHH
T ss_pred CCCeEEEECcHHHhC
Confidence 567899999999975
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=81.23 E-value=0.41 Score=37.10 Aligned_cols=15 Identities=33% Similarity=0.567 Sum_probs=12.6
Q ss_pred cCCceEEecchhhHH
Q 026920 126 RGKKIMFVGDSLSLN 140 (231)
Q Consensus 126 rgkri~FVGDSl~Rn 140 (231)
.|++|+|+|||++..
T Consensus 1 ~~~~i~~~GDSit~G 15 (185)
T 3hp4_A 1 MDNTILILGDXLSAA 15 (185)
T ss_dssp -CEEEEEEECTTTTT
T ss_pred CCCeEEEECCccccc
Confidence 378999999999974
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=77.57 E-value=0.8 Score=35.85 Aligned_cols=15 Identities=40% Similarity=0.676 Sum_probs=13.1
Q ss_pred cCCceEEecchhhHH
Q 026920 126 RGKKIMFVGDSLSLN 140 (231)
Q Consensus 126 rgkri~FVGDSl~Rn 140 (231)
.+++|+|+|||++..
T Consensus 7 ~~~~i~~~GDSit~g 21 (216)
T 3rjt_A 7 PGSKLVMVGDSITDC 21 (216)
T ss_dssp TTCEEEEEESHHHHT
T ss_pred CCCEEEEEecccccc
Confidence 478999999999965
No 5
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=70.69 E-value=1.2 Score=35.59 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=12.9
Q ss_pred hcCCceEEecchhhH
Q 026920 125 FRGKKIMFVGDSLSL 139 (231)
Q Consensus 125 lrgkri~FVGDSl~R 139 (231)
|.-++|+|+|||++.
T Consensus 1 ~~~~~i~~~GDSit~ 15 (240)
T 3mil_A 1 MDYEKFLLFGDSITE 15 (240)
T ss_dssp CCCEEEEEEESHHHH
T ss_pred CCcccEEEEccchhh
Confidence 345799999999998
No 6
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=70.58 E-value=1.2 Score=34.74 Aligned_cols=14 Identities=36% Similarity=0.676 Sum_probs=12.2
Q ss_pred CCceEEecchhhHH
Q 026920 127 GKKIMFVGDSLSLN 140 (231)
Q Consensus 127 gkri~FVGDSl~Rn 140 (231)
.|+|+|+|||++..
T Consensus 1 ~~~i~~~GDSit~g 14 (190)
T 1ivn_A 1 ADTLLILGDSLSAG 14 (190)
T ss_dssp CEEEEEEECHHHHC
T ss_pred CCcEEEEecCcccC
Confidence 37899999999985
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=68.59 E-value=1.5 Score=33.73 Aligned_cols=13 Identities=38% Similarity=0.784 Sum_probs=11.8
Q ss_pred CceEEecchhhHH
Q 026920 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
|+|+|+|||++..
T Consensus 2 ~~i~~~GDS~t~g 14 (195)
T 1yzf_A 2 RKIVLFGDSITAG 14 (195)
T ss_dssp EEEEEEESHHHHC
T ss_pred CeEEEEccccccC
Confidence 5899999999987
No 8
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=66.14 E-value=1.6 Score=34.41 Aligned_cols=13 Identities=46% Similarity=0.787 Sum_probs=11.4
Q ss_pred CceEEecchhhHH
Q 026920 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
|+|+|+|||++..
T Consensus 3 ~~i~~~GDSit~G 15 (216)
T 2q0q_A 3 KRILCFGDSLTWG 15 (216)
T ss_dssp EEEEEEESHHHHT
T ss_pred ceEEEEecCcccC
Confidence 6899999999964
No 9
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=65.91 E-value=2.3 Score=33.55 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=13.3
Q ss_pred cCCceEEecchhhHHH
Q 026920 126 RGKKIMFVGDSLSLNQ 141 (231)
Q Consensus 126 rgkri~FVGDSl~Rnq 141 (231)
...+|+|+|||++...
T Consensus 33 ~~~~i~~~GDSit~g~ 48 (214)
T 2hsj_A 33 VEPNILFIGDSIVEYY 48 (214)
T ss_dssp SCCSEEEEESHHHHTC
T ss_pred ccCCEEEEecchhcCC
Confidence 4678999999999863
No 10
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=62.38 E-value=3.1 Score=33.74 Aligned_cols=23 Identities=26% Similarity=0.363 Sum_probs=16.7
Q ss_pred HHHHHH--hcCCceEEecchhhHHH
Q 026920 119 LYFLEK--FRGKKIMFVGDSLSLNQ 141 (231)
Q Consensus 119 ~~fL~~--lrgkri~FVGDSl~Rnq 141 (231)
..|.+. -...+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 345444 35678999999999864
No 11
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=62.34 E-value=2.1 Score=34.83 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=11.5
Q ss_pred CceEEecchhhHH
Q 026920 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
|+|+|+|||++..
T Consensus 24 ~~I~~lGDSit~G 36 (232)
T 3dci_A 24 KTVLAFGDSLTWG 36 (232)
T ss_dssp EEEEEEESHHHHT
T ss_pred CEEEEEECccccC
Confidence 6899999999864
No 12
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=62.11 E-value=2.6 Score=33.90 Aligned_cols=17 Identities=29% Similarity=0.466 Sum_probs=14.1
Q ss_pred HhcCCceEEecchhhHH
Q 026920 124 KFRGKKIMFVGDSLSLN 140 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rn 140 (231)
.+..++|+|+|||++..
T Consensus 18 ~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 18 HVSFKRPAWLGDSITAN 34 (232)
T ss_dssp CBCCSSEEEEESTTTST
T ss_pred CCCcceEEEEccccccc
Confidence 34568999999999985
No 13
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=61.65 E-value=1.9 Score=34.42 Aligned_cols=17 Identities=35% Similarity=0.424 Sum_probs=14.1
Q ss_pred HhcCCceEEecchhhHH
Q 026920 124 KFRGKKIMFVGDSLSLN 140 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rn 140 (231)
....++|+|+|||++..
T Consensus 17 ~~~~~~i~~lGDSit~g 33 (218)
T 1vjg_A 17 SKTQIRICFVGDSFVNG 33 (218)
T ss_dssp CCEEEEEEEEESHHHHT
T ss_pred cCCCceEEEEccccccC
Confidence 34567999999999986
No 14
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=59.40 E-value=3.5 Score=33.31 Aligned_cols=16 Identities=31% Similarity=0.588 Sum_probs=13.8
Q ss_pred cCCceEEecchhhHHH
Q 026920 126 RGKKIMFVGDSLSLNQ 141 (231)
Q Consensus 126 rgkri~FVGDSl~Rnq 141 (231)
...+|+|+|||++...
T Consensus 37 ~~~~i~~~GDSit~g~ 52 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLM 52 (232)
T ss_dssp CCCSEEEEESHHHHTH
T ss_pred CCCCEEEEechHhhcc
Confidence 5678999999999984
No 15
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=58.20 E-value=3.4 Score=32.10 Aligned_cols=14 Identities=29% Similarity=0.888 Sum_probs=12.0
Q ss_pred ceEEecchhhHHHH
Q 026920 129 KIMFVGDSLSLNQW 142 (231)
Q Consensus 129 ri~FVGDSl~Rnq~ 142 (231)
+|+|+|||++..--
T Consensus 24 ~i~~~GDSit~g~~ 37 (204)
T 3p94_A 24 NVVFMGNSITDGWW 37 (204)
T ss_dssp EEEEEESHHHHTHH
T ss_pred eEEEEccchhhccc
Confidence 89999999998643
No 16
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=56.95 E-value=3.6 Score=34.42 Aligned_cols=16 Identities=38% Similarity=0.808 Sum_probs=13.3
Q ss_pred hcCCceEEecchhhHH
Q 026920 125 FRGKKIMFVGDSLSLN 140 (231)
Q Consensus 125 lrgkri~FVGDSl~Rn 140 (231)
..+++|+|+|||++..
T Consensus 24 ~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 24 WQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTCEEEEEESTTTCT
T ss_pred CCCCEEEEEecCcccC
Confidence 4568999999999853
No 17
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=54.87 E-value=3 Score=33.37 Aligned_cols=13 Identities=54% Similarity=0.516 Sum_probs=11.4
Q ss_pred CceEEecchhhHH
Q 026920 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
.+|+|+|||++..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4799999999975
No 18
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=50.00 E-value=5.7 Score=35.30 Aligned_cols=15 Identities=40% Similarity=0.868 Sum_probs=12.9
Q ss_pred cCCceEEecchhhHH
Q 026920 126 RGKKIMFVGDSLSLN 140 (231)
Q Consensus 126 rgkri~FVGDSl~Rn 140 (231)
..++|+|+|||++..
T Consensus 141 ~~~~I~~iGDSIT~G 155 (366)
T 2w9x_A 141 RKRQIEFIGDSFTVG 155 (366)
T ss_dssp CCCEEEEEESHHHHT
T ss_pred CCceEEEEecccccc
Confidence 567899999999965
No 19
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=48.50 E-value=4.9 Score=35.43 Aligned_cols=15 Identities=33% Similarity=0.631 Sum_probs=12.9
Q ss_pred cCCceEEecchhhHH
Q 026920 126 RGKKIMFVGDSLSLN 140 (231)
Q Consensus 126 rgkri~FVGDSl~Rn 140 (231)
..++|+|+|||++..
T Consensus 131 ~~~~I~~iGDSIT~G 145 (347)
T 2waa_A 131 PQRKILVLGDSVTCG 145 (347)
T ss_dssp CSEEEEEEESTTTTT
T ss_pred CCceEEEeecccccc
Confidence 567899999999965
No 20
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=47.46 E-value=5.4 Score=34.89 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=12.8
Q ss_pred cCCceEEecchhhHH
Q 026920 126 RGKKIMFVGDSLSLN 140 (231)
Q Consensus 126 rgkri~FVGDSl~Rn 140 (231)
..++|+|+|||++-.
T Consensus 121 ~~~~I~~iGDSiT~G 135 (341)
T 2wao_A 121 LERKIEFIGDSITCA 135 (341)
T ss_dssp CSEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 467899999999965
No 21
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=43.51 E-value=1.2 Score=38.52 Aligned_cols=16 Identities=38% Similarity=0.794 Sum_probs=14.0
Q ss_pred hcCCceEEecchhhHH
Q 026920 125 FRGKKIMFVGDSLSLN 140 (231)
Q Consensus 125 lrgkri~FVGDSl~Rn 140 (231)
|-+.+++||||.|.|+
T Consensus 144 lsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 144 LSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred EEeeeeeeecchHHHh
Confidence 5678999999999986
No 22
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=43.10 E-value=12 Score=33.67 Aligned_cols=27 Identities=30% Similarity=0.373 Sum_probs=22.9
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||-.+ |.-.|++..+..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 578999999999876 699999988864
No 23
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=41.05 E-value=14 Score=33.91 Aligned_cols=26 Identities=31% Similarity=0.301 Sum_probs=22.1
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|++|+||||-.+ |.-.|++.++..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 78999999999866 589999988753
No 24
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=40.29 E-value=8.8 Score=31.45 Aligned_cols=12 Identities=25% Similarity=0.432 Sum_probs=11.0
Q ss_pred ceEEecchhhHH
Q 026920 129 KIMFVGDSLSLN 140 (231)
Q Consensus 129 ri~FVGDSl~Rn 140 (231)
+|+|+|||++.+
T Consensus 2 ~I~~~GDS~t~g 13 (233)
T 1k7c_A 2 TVYLAGDSTMAK 13 (233)
T ss_dssp EEEEECCTTTST
T ss_pred EEEEEecCCCcC
Confidence 699999999987
No 25
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=39.96 E-value=14 Score=32.94 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=20.8
Q ss_pred hc-CCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FR-GKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lr-gkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++ |++|+|||| . -|.-.|++..+..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 67 999999999 3 5699999988864
No 26
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=39.85 E-value=13 Score=33.11 Aligned_cols=27 Identities=22% Similarity=0.240 Sum_probs=22.3
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|++|+||||-..-|.-.|++.++..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 789999999997666788888887753
No 27
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=39.84 E-value=3.7 Score=29.68 Aligned_cols=15 Identities=40% Similarity=0.782 Sum_probs=11.8
Q ss_pred CceEEec-chhhHHHH
Q 026920 128 KKIMFVG-DSLSLNQW 142 (231)
Q Consensus 128 kri~FVG-DSl~Rnq~ 142 (231)
.+|+||| ||-+|-||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 4689999 88887765
No 28
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=38.63 E-value=11 Score=33.92 Aligned_cols=16 Identities=31% Similarity=0.360 Sum_probs=13.8
Q ss_pred hcCCceEEecchhhHH
Q 026920 125 FRGKKIMFVGDSLSLN 140 (231)
Q Consensus 125 lrgkri~FVGDSl~Rn 140 (231)
..+++|+|+|||++..
T Consensus 160 ~~~~~Iv~lGDSiT~G 175 (375)
T 2o14_A 160 VTNRTIYVGGDSTVCN 175 (375)
T ss_dssp CCCCEEEEEECTTTSC
T ss_pred CCCcEEEEecCccccC
Confidence 3567999999999987
No 29
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=36.32 E-value=17 Score=32.48 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=22.8
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||-..-|...|++..+..
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 3789999999996655788999988853
No 30
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=35.51 E-value=11 Score=34.30 Aligned_cols=13 Identities=23% Similarity=0.332 Sum_probs=11.5
Q ss_pred CCceEEecchhhH
Q 026920 127 GKKIMFVGDSLSL 139 (231)
Q Consensus 127 gkri~FVGDSl~R 139 (231)
.++|+|+|||++.
T Consensus 185 ~~~Iv~~GDSiT~ 197 (385)
T 3skv_A 185 KPHWIHYGDSICH 197 (385)
T ss_dssp CCEEEEEECSSCT
T ss_pred CceEEEEeccccC
Confidence 6889999999974
No 31
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=34.98 E-value=17 Score=32.23 Aligned_cols=28 Identities=18% Similarity=0.212 Sum_probs=23.1
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||-..-|...|++-.+..
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 173 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTR 173 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 3789999999997655689999988864
No 32
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=34.45 E-value=18 Score=33.01 Aligned_cols=24 Identities=38% Similarity=0.430 Sum_probs=20.6
Q ss_pred cCCceEEecchhhHHHHHHHHHhhcc
Q 026920 126 RGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 126 rgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
+|++|+||||- .|...|++.++..
T Consensus 187 ~glkva~vGD~--~nva~Sl~~~l~~ 210 (353)
T 3sds_A 187 EGLKIAWVGDA--NNVLFDLAIAATK 210 (353)
T ss_dssp TTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCEEEEECCC--chHHHHHHHHHHH
Confidence 89999999997 3699999888854
No 33
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=33.08 E-value=18 Score=32.49 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=21.3
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||- .|.-.|++-.+..
T Consensus 152 ~l~gl~va~vGD~--~~va~Sl~~~~~~ 177 (321)
T 1oth_A 152 SLKGLTLSWIGDG--NNILHSIMMSAAK 177 (321)
T ss_dssp CCTTCEEEEESCS--SHHHHHHHTTTGG
T ss_pred CcCCcEEEEECCc--hhhHHHHHHHHHH
Confidence 3789999999994 3799999888764
No 34
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=33.06 E-value=20 Score=33.14 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=20.5
Q ss_pred hcCCceEEecch---hhH--HHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDS---LSL--NQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDS---l~R--nq~~SL~ClL~~ 151 (231)
++|++|++|||= .+| |.-.|++.++..
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 578899999983 344 788898887753
No 35
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=32.64 E-value=21 Score=31.74 Aligned_cols=27 Identities=33% Similarity=0.340 Sum_probs=22.0
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|++|+||||-..-|.-.|++..+..
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~~ 175 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALSL 175 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHh
Confidence 789999999997644688898888753
No 36
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=31.95 E-value=21 Score=32.15 Aligned_cols=24 Identities=33% Similarity=0.368 Sum_probs=20.6
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIH 150 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~ 150 (231)
++|++|+||||- -|.-.|++..+.
T Consensus 155 l~glkva~vGD~--~rva~Sl~~~~~ 178 (323)
T 3gd5_A 155 LAGLKLAYVGDG--NNVAHSLLLGCA 178 (323)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--CcHHHHHHHHHH
Confidence 689999999997 578889888775
No 37
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=31.93 E-value=19 Score=32.02 Aligned_cols=27 Identities=30% Similarity=0.212 Sum_probs=22.5
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|++|++|||-..-|...|++-.+..
T Consensus 153 l~gl~va~vGD~~~~rva~Sl~~~~~~ 179 (308)
T 1ml4_A 153 IDGLKIGLLGDLKYGRTVHSLAEALTF 179 (308)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGG
T ss_pred CCCeEEEEeCCCCcCchHHHHHHHHHH
Confidence 678999999997655789999988764
No 38
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=31.81 E-value=22 Score=33.14 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=21.2
Q ss_pred hcCCceEEecc---hhhH--HHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGD---SLSL--NQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGD---Sl~R--nq~~SL~ClL~~ 151 (231)
++|++|++||| |.+| |.-.|++.++..
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~ 217 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTR 217 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGG
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHH
Confidence 67899999987 3456 788888888764
No 39
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=31.78 E-value=21 Score=32.41 Aligned_cols=25 Identities=36% Similarity=0.527 Sum_probs=21.0
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
++|++|+||||- -|.-.|++.++..
T Consensus 177 l~glkva~vGD~--~nva~Sl~~~~~~ 201 (340)
T 4ep1_A 177 FKGIKLAYVGDG--NNVCHSLLLASAK 201 (340)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 789999999996 4589999888753
No 40
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=31.56 E-value=21 Score=31.81 Aligned_cols=26 Identities=27% Similarity=0.374 Sum_probs=21.4
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||- -|.-.|++.++..
T Consensus 151 ~l~glkva~vGD~--~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 151 PIRGKTVAWVGDA--NNMLYTWIQAARI 176 (309)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--cchHHHHHHHHHH
Confidence 3789999999994 5699999988864
No 41
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=30.77 E-value=22 Score=32.14 Aligned_cols=26 Identities=31% Similarity=0.447 Sum_probs=21.4
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||- -|.-.|++.++..
T Consensus 172 ~l~glkva~vGD~--~rva~Sl~~~~~~ 197 (339)
T 4a8t_A 172 KLEDCKVVFVGDA--TQVCFSLGLITTK 197 (339)
T ss_dssp CGGGCEEEEESSC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 3678999999997 5788999888753
No 42
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=28.96 E-value=25 Score=32.07 Aligned_cols=26 Identities=31% Similarity=0.447 Sum_probs=21.4
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|+||||- -|.-.|++.++..
T Consensus 150 ~l~glkva~vGD~--~rva~Sl~~~~~~ 175 (355)
T 4a8p_A 150 KLEDCKVVFVGDA--TQVCFSLGLITTK 175 (355)
T ss_dssp CGGGCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 3678999999997 5788999888753
No 43
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=25.82 E-value=54 Score=26.73 Aligned_cols=23 Identities=13% Similarity=0.046 Sum_probs=19.4
Q ss_pred CCceEEecchhhHHHHHHHHHhh
Q 026920 127 GKKIMFVGDSLSLNQWQSLACMI 149 (231)
Q Consensus 127 gkri~FVGDSl~Rnq~~SL~ClL 149 (231)
..+|+++|||.+=|.-..++..+
T Consensus 95 ~~~i~l~G~SaGG~lA~~~a~~~ 117 (274)
T 2qru_A 95 NQSFGLCGRSAGGYLMLQLTKQL 117 (274)
T ss_dssp TCCEEEEEETHHHHHHHHHHHHH
T ss_pred CCcEEEEEECHHHHHHHHHHHHH
Confidence 67999999999999888777544
No 44
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=25.74 E-value=32 Score=30.43 Aligned_cols=28 Identities=18% Similarity=0.366 Sum_probs=22.6
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||=..-|.-.|++-.+..
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~ 170 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNM 170 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHH
Confidence 3789999999996656788888887754
No 45
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=25.35 E-value=37 Score=30.59 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=21.1
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|.+|++|||--+ |.-.||+-.+..
T Consensus 152 ~l~gl~ia~vGD~~~-~va~Sl~~~~~~ 178 (333)
T 1duv_G 152 AFNEMTLVYAGDARN-NMGNSMLEAAAL 178 (333)
T ss_dssp CGGGCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCcc-chHHHHHHHHHH
Confidence 367899999999523 788998887753
No 46
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=24.39 E-value=39 Score=29.99 Aligned_cols=27 Identities=26% Similarity=0.333 Sum_probs=21.4
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||--+ |.-.|++-.+..
T Consensus 145 ~l~gl~va~vGD~~~-rva~Sl~~~~~~ 171 (307)
T 2i6u_A 145 ALRGLRLSYFGDGAN-NMAHSLLLGGVT 171 (307)
T ss_dssp CCTTCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CcCCeEEEEECCCCc-CcHHHHHHHHHH
Confidence 478999999999423 788898888754
No 47
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=24.36 E-value=37 Score=30.63 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=21.4
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||--+ |.-.||+..+..
T Consensus 152 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 178 (335)
T 1dxh_A 152 PLHDISYAYLGDARN-NMGNSLLLIGAK 178 (335)
T ss_dssp CGGGCEEEEESCCSS-HHHHHHHHHHHH
T ss_pred CcCCeEEEEecCCcc-chHHHHHHHHHH
Confidence 367899999999523 788999888754
No 48
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=23.96 E-value=41 Score=30.19 Aligned_cols=27 Identities=30% Similarity=0.506 Sum_probs=21.3
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||--+ |.-.|++-.+..
T Consensus 164 ~l~gl~va~vGD~~~-rva~Sl~~~~~~ 190 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRN-NVATSLMIACAK 190 (325)
T ss_dssp CSTTCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCCc-CcHHHHHHHHHH
Confidence 378999999999323 788999888854
No 49
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=23.85 E-value=34 Score=30.39 Aligned_cols=26 Identities=27% Similarity=0.335 Sum_probs=21.1
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||- -|.-.|++-.+..
T Consensus 151 ~l~gl~ia~vGD~--~rva~Sl~~~~~~ 176 (301)
T 2ef0_A 151 GLAGLEVAWVGDG--NNVLNSLLEVAPL 176 (301)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCC--chhHHHHHHHHHH
Confidence 3789999999995 4688898888753
No 50
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=23.22 E-value=37 Score=30.29 Aligned_cols=26 Identities=31% Similarity=0.420 Sum_probs=21.2
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|++|++|||- -|.-.|++-.+..
T Consensus 152 ~l~gl~va~vGD~--~rva~Sl~~~~~~ 177 (315)
T 1pvv_A 152 TIKGVKVVYVGDG--NNVAHSLMIAGTK 177 (315)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCC--cchHHHHHHHHHH
Confidence 3789999999995 4688999888754
No 51
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=22.99 E-value=43 Score=30.57 Aligned_cols=27 Identities=30% Similarity=0.362 Sum_probs=21.5
Q ss_pred HhcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 124 ~lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
.++|.+|++|||--+ |.-.||+..+..
T Consensus 173 ~l~gl~va~vGD~~~-rva~Sl~~~~~~ 199 (359)
T 2w37_A 173 KLQGLTLTFMGDGRN-NVANSLLVTGAI 199 (359)
T ss_dssp CCTTCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CcCCeEEEEECCCcc-chHHHHHHHHHH
Confidence 478999999999533 788898888753
No 52
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=22.68 E-value=31 Score=29.05 Aligned_cols=14 Identities=29% Similarity=0.468 Sum_probs=11.5
Q ss_pred cCCceEEecchhhH
Q 026920 126 RGKKIMFVGDSLSL 139 (231)
Q Consensus 126 rgkri~FVGDSl~R 139 (231)
.|+.+++|||++|=
T Consensus 229 ~~~~v~~vGDGiND 242 (297)
T 4fe3_A 229 DNSNIILLGDSQGD 242 (297)
T ss_dssp TCCEEEEEESSGGG
T ss_pred cCCEEEEEeCcHHH
Confidence 45679999999886
No 53
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=22.62 E-value=44 Score=30.24 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=20.6
Q ss_pred hcCCceEEecchhhHHHHHHHHHhhcc
Q 026920 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (231)
Q Consensus 125 lrgkri~FVGDSl~Rnq~~SL~ClL~~ 151 (231)
+.|++|++|||--+ |...|++.++..
T Consensus 179 l~gl~ia~vGD~~~-~va~S~~~~~~~ 204 (358)
T 4h31_A 179 LADIQFAYLGDARN-NVGNSLMVGAAK 204 (358)
T ss_dssp GGGCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred cCceEEEecCCCCc-ccchHHHHHHHh
Confidence 67889999999534 688899887753
No 54
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A
Probab=21.72 E-value=24 Score=30.06 Aligned_cols=13 Identities=38% Similarity=0.600 Sum_probs=11.1
Q ss_pred CceEEecchhhHH
Q 026920 128 KKIMFVGDSLSLN 140 (231)
Q Consensus 128 kri~FVGDSl~Rn 140 (231)
++++++|||++..
T Consensus 6 ~~~valGDS~taG 18 (306)
T 1esc_A 6 VPTVFFGDSYTAN 18 (306)
T ss_dssp EEEEECCSHHHHT
T ss_pred ceEEEECchhhhC
Confidence 4799999999865
Done!