BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026921
(231 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224110940|ref|XP_002315689.1| predicted protein [Populus trichocarpa]
gi|222864729|gb|EEF01860.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/227 (65%), Positives = 178/227 (78%), Gaps = 6/227 (2%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY+TLVRDVR AFEGS LVKV+CKGM SDYKKLGAKLK+LVPCVLLSFDDEQILM
Sbjct: 282 AKNGVYITLVRDVRAAFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILM 341
Query: 69 WRGKDWKSMYPEP-PSFSNPVDLDIAGDADGSGTPSDDPSQG---TIRSSPKMISLWKRA 124
WRG+DWKSMYPE PS S P +LDIA +D SG DD + SSPKM+ LWK A
Sbjct: 342 WRGQDWKSMYPEARPSISFPAELDIASGSDDSGKSDDDCDNSDAKILSSSPKMMLLWKHA 401
Query: 125 IESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQ 184
+ES KA++LDEI+LGPD LL KVEEFEGISQA EHSYPALV+S EDG+S+S++ +ED S
Sbjct: 402 LESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSISTFEDDSH 461
Query: 185 SENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERLQRK 231
SEN+ ED+ Y +D++ D + F + ++S P GSL +D IAE+L +K
Sbjct: 462 SENFSEDDMYSDDEYYDSESFEELETS--APPGSLSIDLIAEKLDKK 506
>gi|297739073|emb|CBI28562.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 170/230 (73%), Gaps = 14/230 (6%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY++LV+DVR+AFEGS LVK++CKGMHASDYKK+GAKLKE VPCVLLSFDDEQIL
Sbjct: 167 VKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILT 226
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQ---GTIRSSPKMISLWKRAI 125
WRG WKSMY PSF PV D+A +GSG P + + + +SPKM+SLWK AI
Sbjct: 227 WRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAI 286
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQS 185
ES+KAL+LDEI LGPD LLK VEEFEGISQA EHSYPALV+S EDG + AE+E G S
Sbjct: 287 ESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHE-GYNS 345
Query: 186 ENYDEDEFYPEDDFNDDDEFYDSDSS-----DVVPLGSLPVDHIAERLQR 230
E+Y EDE Y NDDD+ Y + S VPLGSLPVD +A++L R
Sbjct: 346 EDYSEDEMY-----NDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLDR 390
>gi|255568848|ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
gi|223535358|gb|EEF37033.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/230 (64%), Positives = 182/230 (79%), Gaps = 7/230 (3%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY+TLVRDVRNAFEGS LVK++CKGM+ SDYKKLGAKLKELVPCVLLSFDDE ILM
Sbjct: 332 AKNGVYITLVRDVRNAFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEHILM 391
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQ---GTIRSSPKMISLWKRAI 125
WRG++WK MYPE PS S P D +D SG DDPS +RSSPKM+SLW+ AI
Sbjct: 392 WRGQNWKPMYPEVPSVSTPDAADFTSGSDDSGKFEDDPSNRDANVVRSSPKMMSLWECAI 451
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQS 185
ES+KA++LD+I+LGPDDLL+KVEEFE ISQA EHSYPA++LS EDGA++++A + D S S
Sbjct: 452 ESSKAILLDQIDLGPDDLLRKVEEFECISQATEHSYPAVILSSEDGANNTVAAFGDDSLS 511
Query: 186 ENYDEDEFYPEDDFNDDDEFYDSDSSD----VVPLGSLPVDHIAERLQRK 231
++ E++ DD +DDE+YDSDS + VPLGSLPVD +AERL ++
Sbjct: 512 GSFTEEDDTYTDDEYEDDEYYDSDSFEEVDTAVPLGSLPVDRLAERLHQE 561
>gi|359473240|ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/228 (63%), Positives = 169/228 (74%), Gaps = 14/228 (6%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY++LV+DVR+AFEGS LVK++CKGMHASDYKK+GAKLKE VPCVLLSFDDEQIL
Sbjct: 336 VKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILT 395
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQ---GTIRSSPKMISLWKRAI 125
WRG WKSMY PSF PV D+A +GSG P + + + +SPKM+SLWK AI
Sbjct: 396 WRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAI 455
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQS 185
ES+KAL+LDEI LGPD LLK VEEFEGISQA EHSYPALV+S EDG + AE+E G S
Sbjct: 456 ESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHE-GYNS 514
Query: 186 ENYDEDEFYPEDDFNDDDEFYDSDSS-----DVVPLGSLPVDHIAERL 228
E+Y EDE Y NDDD+ Y + S VPLGSLPVD +A++L
Sbjct: 515 EDYSEDEMY-----NDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 557
>gi|225425575|ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/227 (63%), Positives = 171/227 (75%), Gaps = 11/227 (4%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY++LV+DVR+AFEGS LVK++CKGMHASDYKK+GAKLKELVPCVLLSFDDEQIL
Sbjct: 336 VKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILT 395
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQ---GTIRSSPKMISLWKRAI 125
WRG WKSMY PSF PV D+A +GSG P + + + +SPKM+SLWK AI
Sbjct: 396 WRGHGWKSMYQGAPSFLIPVVADVASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAI 455
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQS 185
ES+KAL+LDE LGPD LLK VEEFEGISQA EHSYPALV+S EDG + AEYE G S
Sbjct: 456 ESSKALLLDETGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYE-GYNS 514
Query: 186 ENYDEDEFYPEDDFNDDDEFYDSDS----SDVVPLGSLPVDHIAERL 228
E+Y EDE Y + +DDDE+ ++S VPLGSLPVD +A++L
Sbjct: 515 EDYSEDEMY---NDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 558
>gi|356524038|ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine
max]
Length = 593
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 152/206 (73%), Gaps = 9/206 (4%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY +LV+DVR+AFEGS LVK+NCKG+ SDYKK+GAKLK+LVPCVLLSFDDEQILM
Sbjct: 337 AKNGVYTSLVKDVRDAFEGSILVKINCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILM 396
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQ---GTIRSSPKMISLWKRAI 125
WRGKDWKS YP+P P +I G+ + SG D+ + + +SPKM+SLWKRAI
Sbjct: 397 WRGKDWKSRYPQPLPVFTPSKANIVGNLENSGETDDNQYKHDGNMVNTSPKMLSLWKRAI 456
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVL-SREDGASSSMAEYEDGSQ 184
+S+KAL+LDE NLGPD LL+KVEEF+ +SQA EHS+PA L S+E+ A S A +E+
Sbjct: 457 QSSKALLLDEFNLGPDALLEKVEEFDTVSQALEHSHPAFSLSSKENDAEGSSANFEN--- 513
Query: 185 SENYDEDEFYPEDDFNDDDEFYDSDS 210
+Y D + E+D+ ++ Y SD+
Sbjct: 514 --SYSSDGLHTEEDYAKFEDSYSSDA 537
>gi|449434945|ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 602
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/228 (55%), Positives = 161/228 (70%), Gaps = 17/228 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY++LV DVR+AFEGS LVK++C GMH SDYKKLGAKLKELVPCVLLSFD+EQILM
Sbjct: 381 AKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 440
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDD--------PSQGTIRSSPKMISL 120
WRGKDWKS+ + S P A D G+P + + TI++SPKM L
Sbjct: 441 WRGKDWKSIISDDRSAPLPSR---ASSNDSLGSPGESLENSDLLHGNHHTIKTSPKMKLL 497
Query: 121 WKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYE 180
W+ AI+S KAL+LDEI L PDDLL+KVEEFE ISQA EHSYPA + S ED +S +
Sbjct: 498 WEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSP-----D 552
Query: 181 DGSQSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERL 228
D +S+++ E + +DD +++ +D ++ +VPLGSLPVD IA++L
Sbjct: 553 DSPKSQDHTEANYNSDDDVGREEDLFD-NADPLVPLGSLPVDIIAKKL 599
>gi|449478585|ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 603
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 126/228 (55%), Positives = 161/228 (70%), Gaps = 17/228 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY++LV DVR+AFEGS LVK++C GMH SDYKKLGAKLKELVPCVLLSFD+EQILM
Sbjct: 382 AKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 441
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDD--------PSQGTIRSSPKMISL 120
WRGKDWKS+ + S P A D G+P + + TI++SPKM L
Sbjct: 442 WRGKDWKSIISDDCSAPLP---SRASSNDSLGSPGESLENSDLLHDNHHTIKTSPKMKLL 498
Query: 121 WKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYE 180
W+ AI+S KAL+LDEI L PDDLL+KVEEFE ISQA EHSYPA + S ED +S +
Sbjct: 499 WEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSP-----D 553
Query: 181 DGSQSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERL 228
D +S+++ E + +DD +++ +D ++ +VPLGSLPVD IA++L
Sbjct: 554 DSPKSQDHTEANYNSDDDVGREEDLFD-NADPLVPLGSLPVDIIAKKL 600
>gi|147771140|emb|CAN74182.1| hypothetical protein VITISV_034260 [Vitis vinifera]
Length = 306
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 158/227 (69%), Gaps = 24/227 (10%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY++LV+DVR+AFEGS LVK++CKGMHASDYKK+GAKLK IL
Sbjct: 94 VKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLK--------------ILT 139
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQ---GTIRSSPKMISLWKRAI 125
WRG WKSMY PSF PV D+A +GSG P + + +SPKM+SLWK AI
Sbjct: 140 WRGHGWKSMYQGAPSFLIPVVADVASGLEGSGIPKSXHHRLDTKAVSASPKMMSLWKSAI 199
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQS 185
ES+KAL+LDEI LGPD LLK VEEFEGISQA EHSYPALV+S EDG + AE E G S
Sbjct: 200 ESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEXE-GYNS 258
Query: 186 ENYDEDEFYPEDDFNDDDEFYDSDSSD----VVPLGSLPVDHIAERL 228
E+Y EDE Y +D +DDDE+ ++S + VPLGSLPVD +A++L
Sbjct: 259 EDYSEDEMY--NDDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 303
>gi|307135966|gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 162/225 (72%), Gaps = 11/225 (4%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY++LV DVR+AFEGS LVK++C GMH SDYKKLGAKLKELVPCVLLSFD+EQILM
Sbjct: 382 AKNGVYISLVDDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 441
Query: 69 WRGKDWKSMYPE---PPSFSNPVDLDIAGDADGSGTPSD--DPSQGTIRSSPKMISLWKR 123
WRGKDWKS+ + P S D G + S SD + + TI++SPKM LW+R
Sbjct: 442 WRGKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWER 501
Query: 124 AIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGS 183
AI+S KAL+LDEI L PD+LL++VEEFE ISQA EHSYPA + S E+ +S + D
Sbjct: 502 AIDSNKALMLDEIGLAPDELLERVEEFERISQATEHSYPAFITSSEEVSSPA-----DSP 556
Query: 184 QSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERL 228
+S+++ E + +DD +++ +D + +VPLGSLPVD IA++L
Sbjct: 557 ESQDHSEANYNSDDDVGREEDLFD-NVDPLVPLGSLPVDIIAKKL 600
>gi|297850808|ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
gi|297339127|gb|EFH69544.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 168/229 (73%), Gaps = 16/229 (6%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+KNGVY++LV+DVR+AFE S LVKV+C G+ SDYKK+GAKLKELVPCVLLSFDDEQILM
Sbjct: 345 SKNGVYVSLVKDVRDAFELSPLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILM 404
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSD-----DPSQGTIRSSPKMISLWKR 123
WRG+DWKS + + P + + +IA + D S PSD DPS TI SSPKMISLWKR
Sbjct: 405 WRGRDWKSRFVDNPLIPSLSETNIANELDPSDKPSDEQTVSDPSS-TI-SSPKMISLWKR 462
Query: 124 AIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGS 183
A+ES+KA++L+E++LGPDDLLKKVEE EG S AAEHSY A+VLS DGA+ +Y D
Sbjct: 463 ALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHSYTAMVLSNTDGAAE---DYVD-- 517
Query: 184 QSENYDEDEFYPEDDFNDDDEFYDSDSSDVV-PLGSLPVDHIAERLQRK 231
+ D E Y + D + DDE D +S D V P+G+LPVD I +L+ +
Sbjct: 518 ---DKDRSEEYSDIDDDFDDECSDDESLDPVGPVGTLPVDKIVRKLRER 563
>gi|22329751|ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4 [Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27 [Arabidopsis thaliana]
gi|17065312|gb|AAL32810.1| Unknown protein [Arabidopsis thaliana]
gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis thaliana]
gi|332192262|gb|AEE30383.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 564
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 166/227 (73%), Gaps = 11/227 (4%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+KNGVY++LV+DVR+AFE SSLVKV+C G+ SDYKK+GAKLKELVPCVLLSFDDEQILM
Sbjct: 343 SKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILM 402
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPS---QGTIRSSPKMISLWKRAI 125
WRG++WKS + + P + + + + D S PS++ + T SSPKMISLW+RA+
Sbjct: 403 WRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRAL 462
Query: 126 ESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQS 185
ES+KA++L+E++LGPDDLLKKVEE EG S AAEH+Y A+VLS DGA+ + +D S+
Sbjct: 463 ESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSE- 521
Query: 186 ENYDEDEFYPEDDFNDDDEFYDSDSSDVV-PLGSLPVDHIAERLQRK 231
E+Y + D + DDE D +S D V P+GSLPVD I +L+ +
Sbjct: 522 ------EYYSDIDDDFDDECSDDESLDPVGPVGSLPVDKIVRKLRER 562
>gi|194697426|gb|ACF82797.1| unknown [Zea mays]
Length = 611
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 154/236 (65%), Gaps = 17/236 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+TLV+DVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM
Sbjct: 374 AKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILM 433
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
RGK+WKS Y +P + V +L + + S SD +Q IR PKM LWK
Sbjct: 434 HRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKS 493
Query: 124 AIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 179
A++S+ AL+LD+ NL PD LL VEEF SQA EHS+PAL+++ D ++ S+ AEY
Sbjct: 494 AVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSAEY 553
Query: 180 ---EDGSQSENYDEDEFYPEDDFNDDDEFYDSDS----SDVVPLGSLPVDHIAERL 228
E + +E + D DD+ F D D VPLGSLP+D + ERL
Sbjct: 554 MNDEPETSVAGNEEGQLEQSPDLRDDEHF-DVDMFERLESSVPLGSLPIDSMIERL 608
>gi|162464008|ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic precursor [Zea mays]
gi|75147311|sp|Q84N48.1|CAF2P_MAIZE RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|30349369|gb|AAP22136.1| CRS2-associated factor 2 [Zea mays]
gi|414877310|tpg|DAA54441.1| TPA: crs2 associated factor2 [Zea mays]
Length = 611
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 154/236 (65%), Gaps = 17/236 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+TLV+DVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM
Sbjct: 374 AKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILM 433
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
RGK+WKS Y +P + V +L + + S SD +Q IR PKM LWK
Sbjct: 434 HRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKS 493
Query: 124 AIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 179
A++S+ AL+LD+ NL PD LL VEEF SQA EHS+PAL+++ D ++ S+ AEY
Sbjct: 494 AVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSAEY 553
Query: 180 ---EDGSQSENYDEDEFYPEDDFNDDDEFYDSDS----SDVVPLGSLPVDHIAERL 228
E + +E + D DD+ F D D VPLGSLP+D + ERL
Sbjct: 554 MNDEPETSVAGNEEGQLEQSPDLRDDEHF-DVDMFERLESSVPLGSLPIDSMIERL 608
>gi|242052829|ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
gi|241927535|gb|EES00680.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
Length = 614
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 156/236 (66%), Gaps = 16/236 (6%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+TLV+DVR+AFEG+ LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM
Sbjct: 376 AKNGIYITLVKDVRDAFEGNDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILM 435
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
+RGK+WKS Y +P + V +L ++ D + S SD +Q IR PKM LWK
Sbjct: 436 YRGKEWKSRYSKPLTLIPKVPKNNLAMSSDMNSSDEVSDANTQVAIREVLRPKMFKLWKS 495
Query: 124 AIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 179
A++S+ AL+LD+ +L PD LL VEEF SQA EHS+PAL+++ + + S+ AEY
Sbjct: 496 AVDSSLALLLDDAEANDLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGEVNTESLSAEY 555
Query: 180 EDGSQSENY----DEDEFYPEDDFNDDDEF---YDSDSSDVVPLGSLPVDHIAERL 228
+ +SE +E + D + D+ F VPLGSLP+D + E+L
Sbjct: 556 INDDESETSIAGNEEGQLEQSPDLSGDEHFELDMLERLESSVPLGSLPIDGMIEQL 611
>gi|326525845|dbj|BAJ93099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 607
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 151/233 (64%), Gaps = 13/233 (5%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+ LV+DV++AFEG+ LVK++CKG+ SDYKK+GAKL++LVPCVLLSFD EQIL+
Sbjct: 372 AKNGIYINLVKDVQDAFEGNDLVKIDCKGLEPSDYKKIGAKLRDLVPCVLLSFDKEQILI 431
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
+RGK WKS Y +P + V +L ++ D +G + + TIR P+M LWKR
Sbjct: 432 YRGKGWKSRYLKPLTPFPKVEKNNLAVSSVVDSTGESAGASNNVTIREVLRPRMFKLWKR 491
Query: 124 AIESTKALVL--DEIN-LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYE 180
AIES+ AL L DE N L PD LL +VEEF SQA EHS+PAL++ G ++ E E
Sbjct: 492 AIESSIALSLDDDETNALTPDTLLVRVEEFSVTSQAVEHSFPALLVGNVKGGPEAVNESE 551
Query: 181 DGSQSE--NYDEDEFYPEDDFNDDD--EFYDSDS-SDVVPLGSLPVDHIAERL 228
+GS E++F D DDD E+Y + PLGSLP+D + E+L
Sbjct: 552 NGSDDGIIRPQENQFEKSLDAGDDDHFEYYMLERLESSAPLGSLPIDSVMEQL 604
>gi|222618317|gb|EEE54449.1| hypothetical protein OsJ_01538 [Oryza sativa Japonica Group]
Length = 587
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 19/238 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM
Sbjct: 350 AKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILM 409
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
+RGK+WKS YP+P + + ++ ++ D S +DD + +R PKM LW
Sbjct: 410 FRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTN 469
Query: 124 AIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 179
AIES+ AL+LD+ L PD LL +VE+F SQ EHS+PA++++ ++ + AEY
Sbjct: 470 AIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEY 529
Query: 180 -----EDGS---QSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERLQ 229
E G+ Q + E EDD +DD +SS VPLG+LP+D + ++L
Sbjct: 530 TEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESS--VPLGALPIDAVVKQLN 585
>gi|125525663|gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indica Group]
Length = 609
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 156/238 (65%), Gaps = 19/238 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM
Sbjct: 372 AKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILM 431
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
+RGK+WKS YP+P + + ++ ++ D S +DD + +R PKM LW
Sbjct: 432 FRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTN 491
Query: 124 AIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 179
AIES+ AL+LD+ L PD LL +VE+F SQA EHS+PA++++ ++ + AEY
Sbjct: 492 AIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQAVEHSFPAVLVANDESNPDVLNAEY 551
Query: 180 -----EDGS---QSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERLQ 229
E G+ Q + E ED+ +DD +SS VPLG+LP+D + ++L
Sbjct: 552 TEDEPETGTLEPQQHEFTESSDVAEDNHFEDDMLKRLESS--VPLGALPIDAVVKQLN 607
>gi|115436276|ref|NP_001042896.1| Os01g0323300 [Oryza sativa Japonica Group]
gi|75115027|sp|Q657G7.1|CAF2P_ORYSJ RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|52075771|dbj|BAD44991.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|52076260|dbj|BAD45045.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|113532427|dbj|BAF04810.1| Os01g0323300 [Oryza sativa Japonica Group]
Length = 607
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 19/238 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM
Sbjct: 370 AKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILM 429
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
+RGK+WKS YP+P + + ++ ++ D S +DD + +R PKM LW
Sbjct: 430 FRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTN 489
Query: 124 AIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY 179
AIES+ AL+LD+ L PD LL +VE+F SQ EHS+PA++++ ++ + AEY
Sbjct: 490 AIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEY 549
Query: 180 -----EDGS---QSENYDEDEFYPEDDFNDDDEFYDSDSSDVVPLGSLPVDHIAERLQ 229
E G+ Q + E EDD +DD +SS VPLG+LP+D + ++L
Sbjct: 550 TEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESS--VPLGALPIDAVVKQLN 605
>gi|357132021|ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like
[Brachypodium distachyon]
Length = 607
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 149/232 (64%), Gaps = 12/232 (5%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG+YL LV+DVR+AFEG+ LVK+NC+G+ SDYKK+GAKL++LVPC+LLSFD+EQIL+
Sbjct: 373 AKNGIYLNLVKDVRDAFEGNDLVKINCEGLEPSDYKKIGAKLRDLVPCILLSFDNEQILI 432
Query: 69 WRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKR 123
+RGK+WKS Y +P + V DL ++ A S +D IR P+M LWKR
Sbjct: 433 YRGKEWKSRYSKPLTLIPKVQKSDLSVSSFASSSDESTDASDNVAIREVLRPRMFKLWKR 492
Query: 124 AIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSRE-DGASSSMAEY 179
AIES+ AL LD+ L PD LL +VEEF SQA EHS+PAL++ + ++ E
Sbjct: 493 AIESSIALSLDDNEADALTPDALLARVEEFSITSQAVEHSFPALLVGNSPEVVNAGYMED 552
Query: 180 EDGSQSENYDEDEFYPEDDFNDDDEF-YD--SDSSDVVPLGSLPVDHIAERL 228
E ++ N ++F D ++DD F YD PLGSLP+D + ++L
Sbjct: 553 ESEDETGNPQVNQFEQSPDVSEDDPFEYDMLERLESSAPLGSLPIDSVVDQL 604
>gi|168040806|ref|XP_001772884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675795|gb|EDQ62286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 96/162 (59%), Gaps = 15/162 (9%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY+ LVRDVRNAF+ LVKV+CK M+ SDYKK+GAKLK+LVPCVLLSF+ E ILM
Sbjct: 231 GKNGVYVNLVRDVRNAFKVDDLVKVDCKNMNPSDYKKIGAKLKDLVPCVLLSFERESILM 290
Query: 69 WRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPSQGTIR---------SSPKMIS 119
WRG + + SN V D +G+A G +R + + S
Sbjct: 291 WRGPESLT------ESSNSVQGDSSGEAQPDFNQELPEDGGNVRVEMDPEVEKAVREFES 344
Query: 120 LWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSY 161
L++ A++S +ALVL+E L PD LL+ V+ G + A Y
Sbjct: 345 LYQGALDSEQALVLEESELDPDTLLQVVKSRFGGAFGAPAKY 386
>gi|225445140|ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 62/73 (84%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY LV +VR AFE LV++NC+G++ASDY+K+GAKLK+LVPCVL+SF+ E ILM
Sbjct: 384 AKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILM 443
Query: 69 WRGKDWKSMYPEP 81
WRG DWK ++P+P
Sbjct: 444 WRGSDWKFLHPKP 456
>gi|297738777|emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 62/73 (84%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY LV +VR AFE LV++NC+G++ASDY+K+GAKLK+LVPCVL+SF+ E ILM
Sbjct: 384 AKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILM 443
Query: 69 WRGKDWKSMYPEP 81
WRG DWK ++P+P
Sbjct: 444 WRGSDWKFLHPKP 456
>gi|224113759|ref|XP_002332503.1| predicted protein [Populus trichocarpa]
gi|222832483|gb|EEE70960.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 7/99 (7%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LVR+VR AFE LV++NC+GM+ SD++K+GAKL++LVPCVL+SF+ E ILM
Sbjct: 388 GKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLISFECEHILM 447
Query: 69 WRGKDWKSMYPEPPSFSNPV-DLDIAGDADGSGTPSDDP 106
WRG+DWKS SF+ PV D D A ++ G S P
Sbjct: 448 WRGRDWKS------SFTKPVNDGDEAKNSSIDGATSATP 480
>gi|255589857|ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis]
Length = 748
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 61/73 (83%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNGVY LV++VR AFE LV+++C+G++ SDY+K+GAKLKELVPC+L+SF+ E ILM
Sbjct: 392 AKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHEHILM 451
Query: 69 WRGKDWKSMYPEP 81
WRG+DWKS +P
Sbjct: 452 WRGRDWKSSMIKP 464
>gi|357520913|ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula]
Length = 698
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 60/72 (83%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV +VR AFE LV+VNC+G++ SDY+K+GAKL++LVPC LLS+++E ILM
Sbjct: 312 GKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILM 371
Query: 69 WRGKDWKSMYPE 80
WRG++WKS +P+
Sbjct: 372 WRGRNWKSSFPD 383
>gi|449443167|ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
gi|449521361|ref|XP_004167698.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
Length = 745
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 58/71 (81%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV+ VR AFE LV++NC+G++ SD++K+GAKLK+LVPCVL+SF+ E IL+
Sbjct: 392 GKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDLVPCVLISFESEHILL 451
Query: 69 WRGKDWKSMYP 79
WRG+DWKS P
Sbjct: 452 WRGRDWKSSLP 462
>gi|297836246|ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
gi|297331845|gb|EFH62264.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
Length = 700
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 59/68 (86%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV++V+ AFE LV+++C+GM SD++K+GAKLK+LVPCVL+SF++EQIL+
Sbjct: 383 GKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLISFENEQILI 442
Query: 69 WRGKDWKS 76
WRG++WKS
Sbjct: 443 WRGREWKS 450
>gi|356527769|ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 723
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV+ VR AFE LV++NC+G++ SDY+K+GAKL++LVPC LLSF+ E ILM
Sbjct: 341 GKNGVYCDLVKTVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSFEYEHILM 400
Query: 69 WRGKDWKSMYPE 80
WRG +WKS P+
Sbjct: 401 WRGPNWKSSIPD 412
>gi|18399222|ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis thaliana]
gi|20197570|gb|AAD24394.2| expressed protein [Arabidopsis thaliana]
gi|28393847|gb|AAO42331.1| unknown protein [Arabidopsis thaliana]
gi|330251862|gb|AEC06956.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 701
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 60/73 (82%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV++V+ AFE LV+++C+GM SD++K+GAKLK+LVPCVL+SF++EQIL+
Sbjct: 383 GKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILI 442
Query: 69 WRGKDWKSMYPEP 81
WRG++WKS P
Sbjct: 443 WRGREWKSSLTTP 455
>gi|218188278|gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group]
Length = 701
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVYL LV+ VR AFE LV+V+C G++ SD +K+GAKLK+LVPC LLSF+ E ILM
Sbjct: 325 GKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILM 384
Query: 69 WRGKDWKSMYP 79
WRG DWKS P
Sbjct: 385 WRGNDWKSSLP 395
>gi|115436730|ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group]
Length = 701
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVYL LV+ VR AFE LV+V+C G++ SD +K+GAKLK+LVPC LLSF+ E ILM
Sbjct: 325 GKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILM 384
Query: 69 WRGKDWKSMYP 79
WRG DWKS P
Sbjct: 385 WRGNDWKSSLP 395
>gi|242082009|ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
Length = 674
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV+ VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILM
Sbjct: 325 GKNGVYANLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILM 384
Query: 69 WRGKDWKSMYP 79
WRG DWKS P
Sbjct: 385 WRGSDWKSSLP 395
>gi|414884469|tpg|DAA60483.1| TPA: CRS2-associated factor 1, Precursor [Zea mays]
Length = 392
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILM
Sbjct: 43 GKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILM 102
Query: 69 WRGKDWKSMYP 79
WRG DWKS P
Sbjct: 103 WRGSDWKSSLP 113
>gi|162462028|ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays]
gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays]
Length = 674
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILM
Sbjct: 325 GKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILM 384
Query: 69 WRGKDWKSMYP 79
WRG DWKS P
Sbjct: 385 WRGSDWKSSLP 395
>gi|357132246|ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like
[Brachypodium distachyon]
Length = 702
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 55/71 (77%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV +VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILM
Sbjct: 323 GKNGVYANLVNEVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILM 382
Query: 69 WRGKDWKSMYP 79
WRG DW+S P
Sbjct: 383 WRGNDWRSSLP 393
>gi|194688996|gb|ACF78582.1| unknown [Zea mays]
gi|194700546|gb|ACF84357.1| unknown [Zea mays]
gi|223974875|gb|ACN31625.1| unknown [Zea mays]
Length = 560
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILM
Sbjct: 211 GKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILM 270
Query: 69 WRGKDWKSMYP 79
WRG DWKS P
Sbjct: 271 WRGSDWKSSLP 281
>gi|356495236|ref|XP_003516485.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 705
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY LV ++R AFE LV++NC+ ++ SDY+++GAKLK+LVPC LLSF+++ ILM
Sbjct: 379 GKNGVYWDLVTNIREAFEECELVRINCQELNTSDYRRIGAKLKDLVPCALLSFENDHILM 438
Query: 69 WRGKDWKSMYPEP---PSFSNPVDLDIAGDADGSGTPSD 104
WRG++W+ P+P +N +++D + + + PSD
Sbjct: 439 WRGQNWRPSLPDPRDDDKEANKINVD---NGNSNKLPSD 474
>gi|168045030|ref|XP_001774982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673729|gb|EDQ60248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 53/63 (84%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVYL LVRDVRNAF+ +LVKV+C+ M+ D +K+GAKLK+LVPCVLLSFD E ILM
Sbjct: 231 GKNGVYLNLVRDVRNAFQADNLVKVDCEKMNTHDLRKIGAKLKDLVPCVLLSFDHECILM 290
Query: 69 WRG 71
W+G
Sbjct: 291 WKG 293
>gi|357144801|ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF LV+++CKG+ SDY+K+G KL++LVPC+L+SFD EQI++
Sbjct: 300 AKNGYYASLVPMVRDAFLTDELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKEQIII 359
Query: 69 WRGKDW 74
WRGKD+
Sbjct: 360 WRGKDY 365
>gi|449432211|ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus]
gi|449480099|ref|XP_004155799.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 56/69 (81%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF LV+++CKG+ SDYKK+G KL++LVPC+L++FD EQI++
Sbjct: 295 AKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVV 354
Query: 69 WRGKDWKSM 77
WRGKD++ +
Sbjct: 355 WRGKDYQPL 363
>gi|317106625|dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 56/67 (83%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF + LV+++C+G+ SDYKK+G KL++LVPC+L++F+ EQI++
Sbjct: 304 AKNGYYASLVPMVRDAFLTNELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVV 363
Query: 69 WRGKDWK 75
WRGKD+K
Sbjct: 364 WRGKDYK 370
>gi|22329043|ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|18176015|gb|AAL59968.1| unknown protein [Arabidopsis thaliana]
gi|20465409|gb|AAM20129.1| unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 405
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF S LV+++C G+ DYKK+GAKL++LVPC+L++FD EQ+++
Sbjct: 301 AKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVI 360
Query: 69 WRGKDWK 75
WRGKD+K
Sbjct: 361 WRGKDYK 367
>gi|242078343|ref|XP_002443940.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
gi|241940290|gb|EES13435.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
Length = 437
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y ++V VR+AF LV+++CKG+ SDYKK+G KL++LVPC+L+SFD EQI++
Sbjct: 306 AKNGYYASIVPMVRDAFLMDELVRIDCKGLPKSDYKKIGVKLRDLVPCILVSFDKEQIIV 365
Query: 69 WRGKDWKSMYPEP-PSFSNPVDLDIAGDADGSGTPSDDPS 107
WRGK+ S+ + SF + +D D A D +G PS
Sbjct: 366 WRGKEVGSLQDQTQKSFLSFIDSDGASVKDETGDQEQIPS 405
>gi|255541412|ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical protein [Ricinus communis]
Length = 411
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%), Gaps = 5/76 (6%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF + LV+++C+G+ SDYKK+G KL++LVPC+L++F+ EQI++
Sbjct: 299 AKNGYYASLVPMVRDAFLVNELVRIDCQGLPKSDYKKIGCKLRDLVPCILVTFEKEQIVV 358
Query: 69 WRGKDWKSMYPEPPSF 84
WRGKD+K PP +
Sbjct: 359 WRGKDYK-----PPEY 369
>gi|226508160|ref|NP_001140244.1| uncharacterized protein LOC100272285 [Zea mays]
gi|194698680|gb|ACF83424.1| unknown [Zea mays]
gi|413917198|gb|AFW57130.1| hypothetical protein ZEAMMB73_054545 [Zea mays]
Length = 424
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF LV+++CKG+ SDYKK+G KL++LVPC+L+SFD EQI++
Sbjct: 307 AKNGYYASLVPMVRDAFLTDELVRIDCKGLPKSDYKKIGVKLRDLVPCILVSFDKEQIIV 366
Query: 69 WRGKDWKSMYPEP-PSFSNPVDLDIAGDADGSGTPSDDPS 107
WRG + S+ SF + +D D+A D +G PS
Sbjct: 367 WRGNEDGSLQDRTQKSFLSFIDSDVASVKDETGDQEQIPS 406
>gi|297802930|ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 13/110 (11%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF S LV+++C G+ DYKK+GAKL++LVPC+L++FD EQ+++
Sbjct: 302 AKNGYYGSLVPMVRDAFLVSELVRIDCLGLDRKDYKKIGAKLRDLVPCILVTFDKEQVVI 361
Query: 69 WRGKDWKSMYPEPPS----FSNPVDLDIAGDADG----SGTPSDDPSQGT 110
WRGK++K PP +S+ + + + D+DG S D P + T
Sbjct: 362 WRGKNYK-----PPKDDDEYSSFIHRESSIDSDGDLSCSRGAQDSPGETT 406
>gi|326525102|dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+ F LV+++CKG+ SDY+K+G KL++LVPC+L+SFD EQI++
Sbjct: 305 AKNGYYASLVPMVRDGFLTDELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKEQIIV 364
Query: 69 WRGKD 73
WRGKD
Sbjct: 365 WRGKD 369
>gi|356560247|ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 54/67 (80%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y LV VR+AF LV+++C+G+ DYKK+G KL+++VPC+L++F++EQI++
Sbjct: 301 AKNGYYAFLVPMVRDAFLSCELVRIDCEGLERKDYKKIGCKLRDMVPCILVTFENEQIVV 360
Query: 69 WRGKDWK 75
WRGKD+K
Sbjct: 361 WRGKDYK 367
>gi|225453847|ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 53/67 (79%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF L++++C+G+ DYKK+G KL++ VPC+L++F+ EQI++
Sbjct: 306 AKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCILVTFEKEQIVV 365
Query: 69 WRGKDWK 75
WRGKD+K
Sbjct: 366 WRGKDYK 372
>gi|297739072|emb|CBI28561.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 9/89 (10%)
Query: 144 LKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPEDDFNDDD 203
LK VEEFEGISQA EHSYPALV+S EDG + AE+E G SE+Y EDE Y + DDD
Sbjct: 157 LKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHE-GYNSEDYSEDEMYND----DDD 211
Query: 204 EFYDSDSSDV----VPLGSLPVDHIAERL 228
E+ ++S + VPLGSLPVD +A++L
Sbjct: 212 EYLVNESLEEMESPVPLGSLPVDLLAKQL 240
>gi|225425589|ref|XP_002265469.1| PREDICTED: uncharacterized protein LOC100248190 [Vitis vinifera]
Length = 330
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 9/89 (10%)
Query: 144 LKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPEDDFNDDD 203
LK VEEFEGISQA EHSYPALV+S EDG + AE+E G SE+Y EDE Y + DDD
Sbjct: 244 LKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHE-GYNSEDYSEDEMYND----DDD 298
Query: 204 EFYDSDSSDV----VPLGSLPVDHIAERL 228
E+ ++S + VPLGSLPVD +A++L
Sbjct: 299 EYLVNESLEEMESPVPLGSLPVDLLAKQL 327
>gi|302763677|ref|XP_002965260.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
gi|302809791|ref|XP_002986588.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300145771|gb|EFJ12445.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300167493|gb|EFJ34098.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
Length = 366
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
++NGVYL LV +V++AFE LVK++C+GM+ +D +K+GAKLKEL+ VLLSF+D +LM
Sbjct: 234 SRNGVYLHLVNEVKSAFEVDELVKLDCRGMNIADVRKIGAKLKELLGIVLLSFEDNCVLM 293
Query: 69 WRGKDWKSMYPEPPS-FSNPVDLDIAGDADGSGTPSD-DPSQGTIRSSPKMISLWKRAIE 126
WRG + + F + ++D S P+ DP+ ++++ ++ +LW+RAI
Sbjct: 294 WRGPAKLTEGEQATQDFIRQSVFEGKENSDASEEPNQVDPA--LLQAAKELENLWERAIN 351
Query: 127 STKALVLDEINLGPD 141
L++ L PD
Sbjct: 352 FGMVTTLEDNQLDPD 366
>gi|115475027|ref|NP_001061110.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|75133775|sp|Q6Z4U2.1|CAF1M_ORYSJ RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|40253285|dbj|BAD05220.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|40253602|dbj|BAD05547.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113623079|dbj|BAF23024.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|125560323|gb|EAZ05771.1| hypothetical protein OsI_28005 [Oryza sativa Indica Group]
Length = 428
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF LV+++ KG+ SDY+K+G KL++LVPC+++SFD EQI++
Sbjct: 299 AKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIV 358
Query: 69 WRGKDW 74
WRGKD+
Sbjct: 359 WRGKDY 364
>gi|125602364|gb|EAZ41689.1| hypothetical protein OsJ_26223 [Oryza sativa Japonica Group]
Length = 615
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF LV+++ KG+ SDY+K+G KL++LVPC+++SFD EQI++
Sbjct: 275 AKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIV 334
Query: 69 WRGKDW 74
WRGKD+
Sbjct: 335 WRGKDY 340
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
AKNG Y +LV VR+AF LV+++ KG+ SDY+K+G KL++LVPC+++SFD EQI++
Sbjct: 486 AKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIV 545
Query: 69 WRGKDW 74
WRGKD+
Sbjct: 546 WRGKDY 551
>gi|224130086|ref|XP_002320749.1| predicted protein [Populus trichocarpa]
gi|222861522|gb|EEE99064.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 55/67 (82%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
++NG + +LV VR+AF S LV+++C+G+ SD KK+G KL++LVPC+L++FD EQI++
Sbjct: 299 SRNGYFGSLVPMVRDAFLVSELVRIDCQGLDRSDSKKIGCKLRDLVPCILVTFDKEQIVV 358
Query: 69 WRGKDWK 75
WRGKD+K
Sbjct: 359 WRGKDYK 365
>gi|147867142|emb|CAN82651.1| hypothetical protein VITISV_024772 [Vitis vinifera]
Length = 131
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 8/89 (8%)
Query: 144 LKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPEDDFNDDD 203
LK VEEFEGISQA EHSYPALV+S EDG + AEYE G SE+Y EDE Y + +DDD
Sbjct: 44 LKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYE-GCNSEDYSEDEMY---NDDDDD 99
Query: 204 EFYDSDSSDV----VPLGSLPVDHIAERL 228
E+ ++S + VPLGSLPVD +A++L
Sbjct: 100 EYLVNESLEEMESPVPLGSLPVDLLAKQL 128
>gi|224124340|ref|XP_002319307.1| predicted protein [Populus trichocarpa]
gi|222857683|gb|EEE95230.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR+AFE +V+++CK + SD KK+G KLK+LVPCV + F DEQI++
Sbjct: 281 TRNGVYVNVVDRVRDAFETEEVVRLDCKHVGMSDCKKIGVKLKDLVPCVPILFKDEQIIL 340
Query: 69 WRGK 72
WRGK
Sbjct: 341 WRGK 344
>gi|194695928|gb|ACF82048.1| unknown [Zea mays]
Length = 125
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 117 MISLWKRAIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGAS 173
M LWK A++S+ AL+LD+ NL PD LL VEEF SQA EHS+PAL+++ D ++
Sbjct: 1 MFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDAST 60
Query: 174 SSM-AEY---EDGSQSENYDEDEFYPEDDFNDDDEFYDSDS----SDVVPLGSLPVDHIA 225
S+ AEY E + +E + D DDE +D D VPLGSLP+D +
Sbjct: 61 DSLSAEYMNDEPETSVAGNEEGQLEQSPDLR-DDEHFDVDMFERLESSVPLGSLPIDSMI 119
Query: 226 ERLQRK 231
ERL +
Sbjct: 120 ERLNSE 125
>gi|147867140|emb|CAN82649.1| hypothetical protein VITISV_024770 [Vitis vinifera]
Length = 157
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 8/89 (8%)
Query: 144 LKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPEDDFNDDD 203
LK VEEFEGISQA EHSYPALV+S EDG + AE ++G SE+Y EDE Y + +DDD
Sbjct: 70 LKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAE-DEGYNSEDYSEDEMY---NDDDDD 125
Query: 204 EFYDSDSSDV----VPLGSLPVDHIAERL 228
E+ ++S + VPLGSLPVD +A++L
Sbjct: 126 EYLVNESLEEMESPVPLGSLPVDLLAKQL 154
>gi|218200589|gb|EEC83016.1| hypothetical protein OsI_28075 [Oryza sativa Indica Group]
Length = 365
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV L F DEQI++
Sbjct: 286 TRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIIL 345
Query: 69 WRGK 72
WRGK
Sbjct: 346 WRGK 349
>gi|225461009|ref|XP_002278505.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Vitis
vinifera]
Length = 452
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY+ +V VR AF +V+++C + +SD K++G KL++LVPCV + F DEQI++
Sbjct: 290 TKNGVYVNVVERVREAFRSEEVVRLDCTHVGSSDCKRIGVKLRDLVPCVPILFKDEQIIL 349
Query: 69 WRGKDWKS 76
W+GK+ S
Sbjct: 350 WKGKNGSS 357
>gi|115475115|ref|NP_001061154.1| Os08g0188000 [Oryza sativa Japonica Group]
gi|113623123|dbj|BAF23068.1| Os08g0188000, partial [Oryza sativa Japonica Group]
Length = 361
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV L F DEQI++
Sbjct: 282 TRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIIL 341
Query: 69 WRGK 72
WRGK
Sbjct: 342 WRGK 345
>gi|143955290|sp|Q0J7J7.2|CAF2M_ORYSJ RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|222640037|gb|EEE68169.1| hypothetical protein OsJ_26288 [Oryza sativa Japonica Group]
Length = 366
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV L F DEQI++
Sbjct: 287 TRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIIL 346
Query: 69 WRGK 72
WRGK
Sbjct: 347 WRGK 350
>gi|297737420|emb|CBI26621.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
KNGVY+ +V VR AF +V+++C + +SD K++G KL++LVPCV + F DEQI++
Sbjct: 271 TKNGVYVNVVERVREAFRSEEVVRLDCTHVGSSDCKRIGVKLRDLVPCVPILFKDEQIIL 330
Query: 69 WRGKD 73
W+GK+
Sbjct: 331 WKGKN 335
>gi|15240416|ref|NP_200300.1| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75170294|sp|Q9FFU1.1|CAF2M_ARATH RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|9758269|dbj|BAB08768.1| unnamed protein product [Arabidopsis thaliana]
gi|332009170|gb|AED96553.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 358
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR FE +V+++C + SD K++G KLKE+VPCV + F DEQI++
Sbjct: 285 TRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIIL 344
Query: 69 WRGK 72
WRGK
Sbjct: 345 WRGK 348
>gi|357144748|ref|XP_003573400.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like
[Brachypodium distachyon]
Length = 365
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + SD KK+G KL++LVPCV + F DEQI++
Sbjct: 286 TRNGVYVNVVDRVREAFQTVEVVRLDCTHVGTSDCKKIGVKLRDLVPCVPILFKDEQIIL 345
Query: 69 WRGK 72
WRGK
Sbjct: 346 WRGK 349
>gi|297792957|ref|XP_002864363.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
gi|297310198|gb|EFH40622.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR FE +V+++C + SD K++G KLK+LVPCV + F DEQI++
Sbjct: 281 TRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKDLVPCVPILFKDEQIIL 340
Query: 69 WRGK 72
WRGK
Sbjct: 341 WRGK 344
>gi|356496030|ref|XP_003516873.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 358
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +VK++C + SD KK+G KL++LVPCV + F DEQI++
Sbjct: 284 TRNGVYVNVVERVREAFKTQEVVKLDCIHVGTSDCKKIGVKLRDLVPCVPILFKDEQIIL 343
Query: 69 WRG 71
WRG
Sbjct: 344 WRG 346
>gi|242080803|ref|XP_002445170.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
gi|241941520|gb|EES14665.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
Length = 353
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + SD KK+G KL++LVPC+ + F DEQI++
Sbjct: 287 TRNGVYVNVVDKVREAFKTVEVVRLDCTHVGTSDCKKIGVKLRDLVPCIPILFKDEQIIL 346
Query: 69 WRGK 72
WRGK
Sbjct: 347 WRGK 350
>gi|356530475|ref|XP_003533806.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 388
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +VK++C + SD KK+G KL++LVPCV + F DEQI++
Sbjct: 284 TRNGVYVNVVERVREAFKTQEVVKLDCIHVGTSDCKKIGVKLRDLVPCVPILFKDEQIIL 343
Query: 69 WRG 71
WRG
Sbjct: 344 WRG 346
>gi|226530577|ref|NP_001147995.1| LOC100281604 [Zea mays]
gi|195615022|gb|ACG29341.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +D KK+G KL++LVPC+ + F DEQI++
Sbjct: 283 TRNGVYVNVVDKVREAFKTVEVVRLDCTHVGTTDCKKIGVKLRDLVPCIPILFKDEQIIL 342
Query: 69 WRGK 72
WRGK
Sbjct: 343 WRGK 346
>gi|238014734|gb|ACR38402.1| unknown [Zea mays]
gi|413921148|gb|AFW61080.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +D KK+G KL++LVPC+ + F DEQI++
Sbjct: 283 TRNGVYVNVVDKVREAFKTVEVVRLDCTHVGTTDCKKIGVKLRDLVPCIPILFKDEQIIL 342
Query: 69 WRGK 72
WRGK
Sbjct: 343 WRGK 346
>gi|449468496|ref|XP_004151957.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
gi|449489970|ref|XP_004158472.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
Length = 358
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +SD K++G KL++LVPCV + F +EQI++
Sbjct: 286 TRNGVYVNVVDRVREAFKFEEVVRLDCTHVGSSDCKQIGVKLRDLVPCVPILFKNEQIIL 345
Query: 69 WRGK 72
WRGK
Sbjct: 346 WRGK 349
>gi|168014860|ref|XP_001759969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688719|gb|EDQ75094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 297
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 47/61 (77%)
Query: 10 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMW 69
+ GVY+ LV+ V++AFE LVK++C+ + SD KK+GAKL++LVPCV LSF+ +L+W
Sbjct: 230 RAGVYINLVKMVKDAFEIDELVKIDCRELDRSDMKKVGAKLRDLVPCVPLSFERHFMLLW 289
Query: 70 R 70
+
Sbjct: 290 K 290
>gi|255563935|ref|XP_002522967.1| conserved hypothetical protein [Ricinus communis]
gi|223537779|gb|EEF39397.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 9 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILM 68
+NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV + F DEQI++
Sbjct: 327 TRNGVYVYVVERVREAFQTEEVVRLDCTHVGSSDCKKIGVKLRDLVPCVPILFKDEQIIL 386
Query: 69 WRGKDWKSMYPE 80
WRGK + PE
Sbjct: 387 WRGKRDQEQNPE 398
>gi|357488365|ref|XP_003614470.1| CRS2-associated factor [Medicago truncatula]
gi|355515805|gb|AES97428.1| CRS2-associated factor [Medicago truncatula]
Length = 248
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 2 LFFLHIAAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLK 51
L + KNGVY+ LV+D +AF S VK++CKG+ DYKKLG+K K
Sbjct: 112 LLISRVNVKNGVYIMLVKDAGDAFGRSRFVKIDCKGLDPGDYKKLGSKHK 161
>gi|2980765|emb|CAA18192.1| hypothetical protein [Arabidopsis thaliana]
gi|7270003|emb|CAB79819.1| hypothetical protein [Arabidopsis thaliana]
Length = 392
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 3 FFLHIAAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLK 51
F +AKNG Y +LV VR+AF S LV+++C G+ DYKK+GAKL+
Sbjct: 308 FLFLNSAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLR 356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,003,322,202
Number of Sequences: 23463169
Number of extensions: 179008484
Number of successful extensions: 762716
Number of sequences better than 100.0: 505
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 757566
Number of HSP's gapped (non-prelim): 3680
length of query: 231
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 93
effective length of database: 9,121,278,045
effective search space: 848278858185
effective search space used: 848278858185
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)