Query 026922
Match_columns 231
No_of_seqs 128 out of 424
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 03:08:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026922.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026922hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hi7b1 a.29.15.1 (B:14-162) D 70.2 5.9 0.00043 29.2 6.8 59 70-132 68-146 (149)
2 d1wjpa2 g.37.1.1 (A:43-66) Zin 32.2 5.2 0.00038 21.9 0.3 7 176-182 1-7 (26)
3 d2hi7b1 a.29.15.1 (B:14-162) D 18.2 1E+02 0.0074 21.9 5.5 28 167-195 18-45 (149)
4 d1cola_ f.1.1.1 (A:) Colicin A 16.6 47 0.0034 26.2 3.3 27 106-132 156-182 (197)
5 d1q90g_ f.23.26.1 (G:) PetG su 15.8 52 0.0038 18.3 2.4 13 70-82 17-29 (30)
6 d2dlka1 g.37.1.1 (A:8-37) Zinc 12.3 31 0.0023 19.1 0.7 15 91-107 2-16 (30)
7 d1sxma_ g.3.7.2 (A:) Noxiustox 6.7 75 0.0054 18.5 0.9 12 28-39 2-13 (39)
8 d2o4da1 a.152.1.3 (A:2-145) Hy 6.4 82 0.006 22.0 1.2 14 176-189 45-58 (144)
9 d2ouwa1 a.152.1.4 (A:1-134) Hy 5.8 1.2E+02 0.0084 21.0 1.7 14 175-188 80-93 (134)
10 d2gmya1 a.152.1.3 (A:2-148) Hy 5.3 1E+02 0.0076 21.4 1.2 14 176-189 45-58 (147)
No 1
>d2hi7b1 a.29.15.1 (B:14-162) Disulfide bond formation protein DsbB {Escherichia coli [TaxId: 562]}
Probab=70.24 E-value=5.9 Score=29.23 Aligned_cols=59 Identities=15% Similarity=0.099 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhHhc-CCCCCCCCC------------------C-CCccccccccchhccCCchhHHHHHHHHHHHHH
Q 026922 70 GGVGFLETTYLSYLKLT-NSDAFCPIG------------------G-ASCGDVLNSDYAVVFGVPLPFIGMFAYGLVAVL 129 (231)
Q Consensus 70 a~iGll~S~YLt~~k~~-~~~~~Cdin------------------~-isC~~VL~S~yA~lfGiPnallGl~~Y~~vl~L 129 (231)
+.+|+..+.|-.+.+.. .....|+.+ + .+|+++. =++||++.|-+-++.+.+++++
T Consensus 68 ~~~G~~~a~~h~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~e~~----w~~lGlSma~wn~i~~~~~~~~ 143 (149)
T d2hi7b1 68 AFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWVPQVFVASGDSAERQ----WDFLGLEMPQWLLGIFIAYLIV 143 (149)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSCCCCCCCCCTTSCGGGGSSTTGGGC-------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCccccccccccccCCHHHHHHHHhCCCCCccccc----chhcccCHHHHHHHHHHHHHHH
Confidence 34788888877665542 333445422 2 3566652 2489999999999999888877
Q ss_pred HHH
Q 026922 130 GLL 132 (231)
Q Consensus 130 al~ 132 (231)
.+.
T Consensus 144 ~~~ 146 (149)
T d2hi7b1 144 AVL 146 (149)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 2
>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.18 E-value=5.2 Score=21.90 Aligned_cols=7 Identities=57% Similarity=1.497 Sum_probs=5.4
Q ss_pred ccchhhH
Q 026922 176 ATCSYCL 182 (231)
Q Consensus 176 alCpyC~ 182 (231)
+.||||-
T Consensus 1 avcpycs 7 (26)
T d1wjpa2 1 AVCPYCS 7 (26)
T ss_dssp BCCTTTC
T ss_pred CCCCcce
Confidence 5799994
No 3
>d2hi7b1 a.29.15.1 (B:14-162) Disulfide bond formation protein DsbB {Escherichia coli [TaxId: 562]}
Probab=18.24 E-value=1e+02 Score=21.86 Aligned_cols=28 Identities=11% Similarity=0.259 Sum_probs=16.7
Q ss_pred HHHHHHHhCccchhhHHHHHHHHHHHHHH
Q 026922 167 YILSTNFSGATCSYCLTSALLSFSLFFIS 195 (231)
Q Consensus 167 yi~~~~vI~alCpyC~vs~~vti~Lf~~s 195 (231)
|+|... --+-|+.|+..-..-..+....
T Consensus 18 ~~q~~~-gl~PC~LCi~QR~~~~~i~~~~ 45 (149)
T d2hi7b1 18 WFQHVM-LLKPCVLCIYERVALFGVLGAA 45 (149)
T ss_dssp HHHTTS-CCCCCSHHHHHHHHHHTTTHHH
T ss_pred HHHHHc-CCCCcHHHHHHHHHHHHHHHHH
Confidence 555543 4589999997665444333333
No 4
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=16.57 E-value=47 Score=26.21 Aligned_cols=27 Identities=41% Similarity=0.625 Sum_probs=20.3
Q ss_pred cchhccCCchhHHHHHHHHHHHHHHHH
Q 026922 106 DYAVVFGVPLPFIGMFAYGLVAVLGLL 132 (231)
Q Consensus 106 ~yA~lfGiPnallGl~~Y~~vl~Lal~ 132 (231)
-++..+|+|...+|+++|.++.+++-+
T Consensus 156 ~~~~~~g~~~~~iGI~g~li~~~v~al 182 (197)
T d1cola_ 156 AYALSLGVPAIAVGIAGILLAAVVGAL 182 (197)
T ss_dssp HHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHH
Confidence 456667999999999999666555544
No 5
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=15.78 E-value=52 Score=18.29 Aligned_cols=13 Identities=38% Similarity=0.669 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHH
Q 026922 70 GGVGFLETTYLSY 82 (231)
Q Consensus 70 a~iGll~S~YLt~ 82 (231)
..+|+.+++|+-|
T Consensus 17 Tl~Glfv~AylQY 29 (30)
T d1q90g_ 17 TIAGLFVTAYLQY 29 (30)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3479999999876
No 6
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.34 E-value=31 Score=19.13 Aligned_cols=15 Identities=20% Similarity=0.656 Sum_probs=12.0
Q ss_pred CCCCCCCCccccccccc
Q 026922 91 FCPIGGASCGDVLNSDY 107 (231)
Q Consensus 91 ~Cdin~isC~~VL~S~y 107 (231)
.||+. +|+++.+++|
T Consensus 2 ~cdf~--gc~kifsnrq 16 (30)
T d2dlka1 2 PCDFP--GCGRIFSNRQ 16 (30)
T ss_dssp ECSST--TTCCEESSHH
T ss_pred CCCCC--CchhhhccHH
Confidence 58876 7999998875
No 7
>d1sxma_ g.3.7.2 (A:) Noxiustoxin {Mexican scorpion (Centruroides noxius) [TaxId: 6878]}
Probab=6.71 E-value=75 Score=18.54 Aligned_cols=12 Identities=42% Similarity=0.830 Sum_probs=8.7
Q ss_pred ccccccccCCCC
Q 026922 28 VLPVKCLSSRQS 39 (231)
Q Consensus 28 ~~~~~~~~~~~~ 39 (231)
.|.|||+|.+|-
T Consensus 2 ~invkctspkqc 13 (39)
T d1sxma_ 2 IINVKCTSPKQC 13 (39)
T ss_dssp BCCCCCSSTTSS
T ss_pred eEeeeeCChHHH
Confidence 467899887764
No 8
>d2o4da1 a.152.1.3 (A:2-145) Hypothetical protein PA0269 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=6.43 E-value=82 Score=22.03 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=11.4
Q ss_pred ccchhhHHHHHHHH
Q 026922 176 ATCSYCLTSALLSF 189 (231)
Q Consensus 176 alCpyC~vs~~vti 189 (231)
.-|.||+..|.-..
T Consensus 45 n~C~YC~~~H~~~a 58 (144)
T d2o4da1 45 NGCAYCVNMHANDA 58 (144)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCChHHHHhHHHHH
Confidence 47999999998643
No 9
>d2ouwa1 a.152.1.4 (A:1-134) Hypothetical protein Rru_A0301 {Rhodospirillum rubrum [TaxId: 1085]}
Probab=5.79 E-value=1.2e+02 Score=20.98 Aligned_cols=14 Identities=36% Similarity=0.790 Sum_probs=11.5
Q ss_pred CccchhhHHHHHHH
Q 026922 175 GATCSYCLTSALLS 188 (231)
Q Consensus 175 ~alCpyC~vs~~vt 188 (231)
..=|.||+..|...
T Consensus 80 ~n~C~YC~~~H~~~ 93 (134)
T d2ouwa1 80 ANSCSYCAHSHTAA 93 (134)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HcCChHHHHHHHHH
Confidence 45799999999864
No 10
>d2gmya1 a.152.1.3 (A:2-148) Hypothetical protein Atu0492 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=5.33 E-value=1e+02 Score=21.40 Aligned_cols=14 Identities=14% Similarity=0.584 Sum_probs=11.1
Q ss_pred ccchhhHHHHHHHH
Q 026922 176 ATCSYCLTSALLSF 189 (231)
Q Consensus 176 alCpyC~vs~~vti 189 (231)
.=|.||+..|....
T Consensus 45 ngC~YC~~~h~~~a 58 (147)
T d2gmya1 45 NGCAFCVDMHVKES 58 (147)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHH
Confidence 47999999997543
Done!