Citrus Sinensis ID: 026924
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 231 | 2.2.26 [Sep-21-2011] | |||||||
| Q7Z9I2 | 253 | Uncharacterized oxidoredu | yes | no | 0.683 | 0.624 | 0.312 | 3e-12 | |
| P40580 | 263 | Benzil reductase ((S)-ben | yes | no | 0.709 | 0.623 | 0.275 | 1e-09 | |
| Q7Z9I4 | 253 | Uncharacterized oxidoredu | no | no | 0.740 | 0.675 | 0.282 | 2e-08 | |
| Q7Z9I3 | 253 | Uncharacterized oxidoredu | no | no | 0.740 | 0.675 | 0.277 | 9e-08 | |
| Q9P7I6 | 254 | Uncharacterized oxidoredu | no | no | 0.757 | 0.688 | 0.282 | 1e-07 | |
| O88736 | 334 | 3-keto-steroid reductase | yes | no | 0.567 | 0.392 | 0.272 | 1e-06 | |
| A2RVM0 | 322 | Short-chain dehydrogenase | no | no | 0.632 | 0.453 | 0.303 | 1e-06 | |
| P21158 | 166 | C-factor OS=Myxococcus xa | no | no | 0.372 | 0.518 | 0.336 | 5e-06 | |
| Q6WAU1 | 314 | (-)-isopiperitenone reduc | N/A | no | 0.367 | 0.270 | 0.395 | 6e-06 | |
| Q9R092 | 317 | 17-beta-hydroxysteroid de | no | no | 0.619 | 0.451 | 0.272 | 9e-06 |
| >sp|Q7Z9I2|YCP9_SCHPO Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.09c PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V + G +RGIGL K+L + + V A+ R P AT L + P + ++LD+T
Sbjct: 7 VYFIAGGNRGIGLSLVKELSSR-EGTTVFASARKPEAATELQEWSKSHP-NVKTVELDVT 64
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGIL-SIPNVLQ-PETTLNKVEKSSLMLAYEVNAV 147
+ + +A+S+ + +++L SGI S V++ PE N Y+ N +
Sbjct: 65 SQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNA--------HYQTNVL 116
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
GPI V K PLL ++ V S+ GS+GD R G+ +Y SKAA+N
Sbjct: 117 GPIHVFKAFYPLL------TKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAIN 166
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|P40580|BZRD_YEAST Benzil reductase ((S)-benzoin forming) IRC24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC24 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQL 86
G V L+ GASRGIGL+ K ++E++D+ V R GL L+ + ++ L
Sbjct: 2 GKVILITGASRGIGLQLVKTVIEEDDECIVYGVART---EAGLQSLQREYGADKFVYRVL 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T S +EA + I++K+G L+ ++ +G+L + + + +++ + ++VN
Sbjct: 59 DITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPVKSISQSNSEHDIKQWERL--FDVNF 116
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ ++ PLLK V N+ GW +Y SKAALNH
Sbjct: 117 FSIVSLVALCLPLLKSS--------PFVGNIVFVSSGASVKPYNGWSAYGCSKAALNH 166
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Reduces benzil stereospecifically to (S)-benzoin. Is probably involved in a pathway contributing to genomic integrity. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 2 EC: 0 |
| >sp|Q7Z9I4|YCP6_SCHPO Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.06c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
+ + G +RGIGL K+L N +G V+ A+ R P AT L + ++ + +++LD+
Sbjct: 7 IYFIAGGNRGIGLSLVKEL--SNREGTVVFASARKPEAATELQEW-SKSHSNVHIIKLDI 63
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEVNA 146
+ + +A+ + + G +++L SGI N + P+ N Y+ N
Sbjct: 64 SSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNS--------HYKTNV 115
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDK 206
+GPI V + PL+K G + I + S+ VGS+G Y SKAALN
Sbjct: 116 LGPIHVYQAFYPLVKKGESKI------IVFTSSLVGSMGAFFPFNQSGYGQSKAALNFTM 169
Query: 207 ICVSGVWSKEG 217
+S EG
Sbjct: 170 KEISFELQDEG 180
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7Z9I3|YCP8_SCHPO Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.08c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
+ + G +RGIGL K+L N KG V+ A+ R P AT L + ++ + +++LD+
Sbjct: 7 IYFIAGGNRGIGLSLVKEL--SNRKGTVVFASARKPGAATKLQEW-SKSHSNVHIIKLDV 63
Query: 89 TVESTIEASAKSIKEKYGSLNLL-INASGILSI-PNVLQPETTLNKVEKSSLMLAYEVNA 146
+ + +A+ + + ++++L +N++ S P V P+ N Y+ N
Sbjct: 64 SSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNS--------HYKTNV 115
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDK 206
+GPI V + PL+K G + I + S+ GS+G +Y SKAALN+
Sbjct: 116 LGPIHVYQAFYPLIKKGRSKI------IVFTSSLAGSMGAFFPSSQSAYGQSKAALNYTM 169
Query: 207 ICVSGVWSKEG 217
+S EG
Sbjct: 170 KEISFELQDEG 180
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9P7I6|YJNK_SCHPO Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.20 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V ++ G +RGIGL K+L N +G V A+ R P A+ L D ++ + +++L
Sbjct: 6 GIVYVIVGGNRGIGLSLVKEL--SNKEGVTVFASARGPGSASELKDW-SKTHSNVHIIKL 62
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T + + +A +++ +++L SG I QP + K M Y+ N
Sbjct: 63 DVTSLRSAKDAAMQVEKVVKCIDVLWVNSG---ISKSFQP---VLKTSDELWMSHYQTNV 116
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDK 206
+GPI V + LLK G +++ ++++A +G + R + +Y SKAALN+
Sbjct: 117 LGPIHVYQAFYHLLKEGKL---KNIVFTSSMAACMGGV---RPNTYSAYGQSKAALNYTM 170
Query: 207 ICVSGVWSKEG 217
+S K+G
Sbjct: 171 KEISFELEKDG 181
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O88736|DHB7_MOUSE 3-keto-steroid reductase OS=Mus musculus GN=Hsd17b7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLD 87
V L+ GAS GIGL +LL ++D + CRN + A + D L + + ++Q+D
Sbjct: 4 VVLITGASSGIGLALCGRLLAEDDDLHLCLACRNLSKARAVRDTLLASHPSAEVSIVQMD 63
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIP--------------NVLQPETTL--- 130
++ ++ A+ +K+K+ L+ L +GIL P NV+ TT
Sbjct: 64 VSSLQSVVRGAEEVKQKFQRLDYLYLNAGILPNPQFNLKAFFCGIFSRNVIHMFTTAEGI 123
Query: 131 ----NKVEKSSLMLAYEVNAVGPILVIKHMSPLL 160
+ V L +E N G ++I+ + PLL
Sbjct: 124 LTQNDSVTADGLQEVFETNLFGHFILIRELEPLL 157
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Responsible for the reduction of the keto group on the C-3 of sterols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 2 |
| >sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLD 82
V G ++V GAS GIG+E A+ +L V+A +GA D+ + P +LD
Sbjct: 25 VDGTGLTAIVTGASSGIGVETAR-VLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLD 83
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
V++LDL+ ++ A K LNLLIN +GI++ P +L K ++ L +
Sbjct: 84 VMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMACPFMLS---------KDNIELQF 134
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180
N +G L+ K + +K +R+ +V NLS+
Sbjct: 135 ATNHLGHFLLTKLLLDTMKSTSRESKREGRIV-NLSSE 171
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Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P21158|CSGA_MYXXA C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT 165
G +++LIN +G+ + L V+ + + + +NA+GP+ V M P L+ G
Sbjct: 11 GPVDVLINNAGVSGL------WCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQGA- 63
Query: 166 GIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+ R VA++++R+GS+ N GG ++YR SKAALN
Sbjct: 64 -LRR----VAHVTSRMGSLAANTDGGAYAYRMSKAALN 96
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Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation. Myxococcus xanthus (taxid: 34) |
| >sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP----NGATGLLDLKNRFPERLDVLQL 86
+LV GA++GIG E +QL EK VI T RN LL N RL QL
Sbjct: 8 ALVTGANKGIGFEICRQLAEKGI--IVILTSRNEKRGLEARQKLLKELNVSENRLVFHQL 65
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+T +++ A A IK K+G L++L+N +G+
Sbjct: 66 DVTDLASVAAVAVFIKSKFGKLDILVNNAGV 96
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Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH. Mentha piperita (taxid: 34256) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 8 EC: 2 |
| >sp|Q9R092|H17B6_MOUSE 17-beta-hydroxysteroid dehydrogenase type 6 OS=Mus musculus GN=Hsd17b6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+ G G G A+QL + + V+A C GA +L+N+ +RL+ + LD+T
Sbjct: 33 FITGCDSGFGNLLARQLDRRGMR--VLAACLTEKGAE---ELRNKTSDRLETVILDVTKT 87
Query: 92 STIEASAKSIKEKYGSLNL--LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+I A+ + +KE+ G L L+N +G VLQP + M ++VN +G
Sbjct: 88 ESIVAATQWVKERVGDRGLWGLVNNAG------VLQPFAYIEWYRPEDYMPIFQVNLIGL 141
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
V M L+K + + N+S+ +G + GG++S
Sbjct: 142 TQVTISMLFLVK-------KARGRIVNVSSALGRVA--LFGGFYS 177
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NAD-dependent oxidoreductase with broad substrate specificity that shows both oxidative and reductive activity (in vitro). Has 17-beta-hydroxysteroid dehydrogenase activity towards various steroids (in vitro). Converts 5-alpha-androstan-3-alpha,17-beta-diol to androsterone and estradiol to estrone (in vitro). Has 3-alpha-hydroxysteroid dehydrogenase activity towards androsterone (in vitro). Has retinol dehydrogenase activity towards all-trans-retinol (in vitro). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 231 | ||||||
| 224115622 | 279 | predicted protein [Populus trichocarpa] | 0.865 | 0.716 | 0.814 | 2e-87 | |
| 359483478 | 289 | PREDICTED: uncharacterized oxidoreductas | 0.835 | 0.667 | 0.821 | 3e-84 | |
| 255586225 | 296 | short-chain dehydrogenase, putative [Ric | 0.800 | 0.625 | 0.833 | 5e-83 | |
| 449515941 | 289 | PREDICTED: uncharacterized oxidoreductas | 0.883 | 0.705 | 0.747 | 3e-80 | |
| 449435932 | 275 | PREDICTED: uncharacterized oxidoreductas | 0.800 | 0.672 | 0.795 | 4e-78 | |
| 297804086 | 298 | short-chain dehydrogenase/reductase fami | 0.870 | 0.674 | 0.748 | 5e-77 | |
| 30685197 | 298 | Rossmann-fold NAD(P)-binding domain-cont | 0.774 | 0.600 | 0.8 | 3e-76 | |
| 356529026 | 287 | PREDICTED: uncharacterized oxidoreductas | 0.831 | 0.668 | 0.739 | 7e-74 | |
| 255646970 | 291 | unknown [Glycine max] | 0.865 | 0.687 | 0.722 | 4e-73 | |
| 356555952 | 291 | PREDICTED: uncharacterized oxidoreductas | 0.865 | 0.687 | 0.722 | 5e-73 |
| >gi|224115622|ref|XP_002317081.1| predicted protein [Populus trichocarpa] gi|222860146|gb|EEE97693.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/205 (81%), Positives = 183/205 (89%), Gaps = 5/205 (2%)
Query: 1 MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT 60
MA L AFRSIR+ F AS+ +KW+GGVS+VQGASRGIGLEF KQLLEKNDKG VIAT
Sbjct: 1 MATPL-AFRSIRRACF---ASSGLKWEGGVSMVQGASRGIGLEFVKQLLEKNDKGHVIAT 56
Query: 61 CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSI 120
CRNPNGATGL+DLKN+F ERL+++ +DLT+ESTIEASAK I+EKYGSLNLLINASGILSI
Sbjct: 57 CRNPNGATGLVDLKNKFAERLNIMPIDLTIESTIEASAKFIREKYGSLNLLINASGILSI 116
Query: 121 PNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSA 179
PNVLQPETTL+KVE+SSLMLAYEVNAVGPIL IKHM PLLK GG G ERDVAVVANLSA
Sbjct: 117 PNVLQPETTLSKVERSSLMLAYEVNAVGPILAIKHMWPLLKAGGGFGTERDVAVVANLSA 176
Query: 180 RVGSIGDNRLGGWHSYRASKAALNH 204
RVGSIGDN LGGWHSYR+SKAALN
Sbjct: 177 RVGSIGDNHLGGWHSYRSSKAALNQ 201
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359483478|ref|XP_002269427.2| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Vitis vinifera] gi|297740911|emb|CBI31093.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/196 (82%), Positives = 179/196 (91%), Gaps = 3/196 (1%)
Query: 10 SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
S+R+ A S+ SA VKW+GGVS+VQGASRGIGLEF KQLLEKN+KG VIATCRNP+GAT
Sbjct: 18 SVRR-ALLSTCSA-VKWEGGVSMVQGASRGIGLEFVKQLLEKNEKGHVIATCRNPDGATA 75
Query: 70 LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
LLDLKN F ERL++LQLDLT+ESTIEASA SI+E+YGSLNLLINASGILSIPN+LQPETT
Sbjct: 76 LLDLKNEFAERLNILQLDLTIESTIEASANSIRERYGSLNLLINASGILSIPNILQPETT 135
Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188
L+KV+KSSL+LAYEVNAVGPILVIKHM PLL GG+G ERDVAVVANLSARVGSIGDNR
Sbjct: 136 LSKVQKSSLLLAYEVNAVGPILVIKHMWPLLTAGGGSGTERDVAVVANLSARVGSIGDNR 195
Query: 189 LGGWHSYRASKAALNH 204
LGGWHSYR+SKAALN
Sbjct: 196 LGGWHSYRSSKAALNQ 211
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255586225|ref|XP_002533767.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223526304|gb|EEF28612.1| short-chain dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/186 (83%), Positives = 172/186 (92%), Gaps = 1/186 (0%)
Query: 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
W+GGVS+VQGASRGIGL+F KQLLEK++KG VIATCRNP+GATGLLDLKN+F ERL++ Q
Sbjct: 39 WEGGVSMVQGASRGIGLQFVKQLLEKDEKGHVIATCRNPDGATGLLDLKNKFDERLNIQQ 98
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LDLT+ES+IEASA +I+EKYGSLNLLINASGILSIPN+LQPETTLNKVEKSSLMLAYEVN
Sbjct: 99 LDLTIESSIEASATAIREKYGSLNLLINASGILSIPNLLQPETTLNKVEKSSLMLAYEVN 158
Query: 146 AVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
AVGPILVIKHM PLLK GG+G +RDVAVVANLSARVGSIGDNRLGGWHSYR+SKAALN
Sbjct: 159 AVGPILVIKHMWPLLKAGGGSGTQRDVAVVANLSARVGSIGDNRLGGWHSYRSSKAALNQ 218
Query: 205 DKICVS 210
VS
Sbjct: 219 LTKTVS 224
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515941|ref|XP_004165006.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 178/206 (86%), Gaps = 2/206 (0%)
Query: 1 MANSLFAFRSIRKVA-FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA 59
+ + +FA R++R A + +S S KW+GGVS+VQGASRGIGLEF K LLEKN+KG V+A
Sbjct: 6 LNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVA 65
Query: 60 TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILS 119
TCRNP ATGLL+LKN+F ERL +LQLD+T E+TI+ASAKSI+E+YGSLNLLINASGILS
Sbjct: 66 TCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKASAKSIEERYGSLNLLINASGILS 125
Query: 120 IPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLS 178
IPNV+QPETTL KVEKSSL+ AYEVNAVGPILVIKH+ P LK GG+G ER+VAVVANLS
Sbjct: 126 IPNVIQPETTLYKVEKSSLLHAYEVNAVGPILVIKHLWPFLKAGGGSGTEREVAVVANLS 185
Query: 179 ARVGSIGDNRLGGWHSYRASKAALNH 204
ARVGSIGDNRLGGWHSYRASK ALN
Sbjct: 186 ARVGSIGDNRLGGWHSYRASKTALNQ 211
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435932|ref|XP_004135748.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/186 (79%), Positives = 167/186 (89%), Gaps = 1/186 (0%)
Query: 20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
A ++KW+GGVS+VQGASRGIGLEF K LLEKN+KG V+ATCRNP ATGLL+LKN+F E
Sbjct: 12 APRTLKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVATCRNPGQATGLLELKNKFDE 71
Query: 80 RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
RL +LQLD+T E+TI+ASAKSI+E+YGSLNLLINASGILSIPNV+QPETTL KVEKSSL+
Sbjct: 72 RLCILQLDVTNETTIKASAKSIEERYGSLNLLINASGILSIPNVIQPETTLYKVEKSSLL 131
Query: 140 LAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
AYEVNAVGPILVIKH+ P LK GG+G ER+VAVVANLSARVGSIGDNRLGGWHSYRAS
Sbjct: 132 HAYEVNAVGPILVIKHLWPFLKAGGGSGTEREVAVVANLSARVGSIGDNRLGGWHSYRAS 191
Query: 199 KAALNH 204
K ALN
Sbjct: 192 KTALNQ 197
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804086|ref|XP_002869927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315763|gb|EFH46186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 175/203 (86%), Gaps = 2/203 (0%)
Query: 4 SLFAFRSIRKVAF-TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62
++ A R +R A TSS+S+ KW+GGVS+VQGASRGIGLEF +QLL N+KG V+ATCR
Sbjct: 18 AVVALRKMRVSALATSSSSSFPKWEGGVSMVQGASRGIGLEFVRQLLGNNEKGYVVATCR 77
Query: 63 NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPN 122
NP AT L DLKNRF ERL + +LD+T E+TIE SA+S++E+YGSLNLLINA+GILSIP+
Sbjct: 78 NPKEATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVRERYGSLNLLINAAGILSIPS 137
Query: 123 VLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARV 181
VLQPETTLNKVEKSSLMLAYEVNAVGPILV+KHM PLLK GG+G ER+VAVVANLSARV
Sbjct: 138 VLQPETTLNKVEKSSLMLAYEVNAVGPILVMKHMWPLLKAGGGSGTEREVAVVANLSARV 197
Query: 182 GSIGDNRLGGWHSYRASKAALNH 204
GSIGDNRLGGWHSYRASK ALN
Sbjct: 198 GSIGDNRLGGWHSYRASKTALNQ 220
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30685197|ref|NP_193808.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|15450423|gb|AAK96505.1| AT4g20760/F21C20_110 [Arabidopsis thaliana] gi|23507787|gb|AAN38697.1| At4g20760/F21C20_110 [Arabidopsis thaliana] gi|332658958|gb|AEE84358.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/180 (80%), Positives = 160/180 (88%), Gaps = 1/180 (0%)
Query: 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
WKGGVS+VQGASRGIGLEF +QLLE N G V+ATCRNP AT L DLKNRF ERL + +
Sbjct: 41 WKGGVSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPKEATSLSDLKNRFSERLFIQK 100
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LD+T E+TIE SA+S++EKYGSLNLLINA+GILSIP VLQPETTLNKVEKSSLMLAYEVN
Sbjct: 101 LDVTDETTIEESAESVREKYGSLNLLINAAGILSIPGVLQPETTLNKVEKSSLMLAYEVN 160
Query: 146 AVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
AVGPILV+KHM PLLK GG+G +R+VAVVANLSARVGSIGDNRLGGWHSYRASK+ALN
Sbjct: 161 AVGPILVMKHMWPLLKAGGGSGTDREVAVVANLSARVGSIGDNRLGGWHSYRASKSALNQ 220
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356529026|ref|XP_003533098.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 145/196 (73%), Positives = 167/196 (85%), Gaps = 4/196 (2%)
Query: 10 SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
S+ + AF+SS S+ ++GGVS+VQGASRGIGLEF KQ+LE +DK VIATCRNP+ +TG
Sbjct: 17 SLTRRAFSSSPSS---FQGGVSMVQGASRGIGLEFVKQILEYDDKEHVIATCRNPSASTG 73
Query: 70 LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
L+ LK++F +RL +L LDLTVE++IEASA SIKE YG LNLLINASGILSIP V+ PETT
Sbjct: 74 LIHLKDKFADRLKILSLDLTVETSIEASALSIKETYGRLNLLINASGILSIPEVMHPETT 133
Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188
LNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G R AVVA+LSARV SIGDNR
Sbjct: 134 LNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVASIGDNR 193
Query: 189 LGGWHSYRASKAALNH 204
LGGWHSYR+SKA+LN
Sbjct: 194 LGGWHSYRSSKASLNQ 209
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255646970|gb|ACU23954.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 167/202 (82%), Gaps = 2/202 (0%)
Query: 5 LFAFRSIRKVAFTSSASASVKWKG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63
+ A S R ++ T A +S ++G GVS+VQGASRGIGLEF KQLLE +DK VIATCRN
Sbjct: 12 MMASHSPRILSLTRRAFSSCSFQGEGVSMVQGASRGIGLEFVKQLLENDDKEHVIATCRN 71
Query: 64 PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
P+ +TGL+ LK++F +RL +L LDLTVE++IEASA SI+E YG LNLLINASGILSIP V
Sbjct: 72 PSASTGLIHLKDKFADRLRILPLDLTVENSIEASALSIRETYGHLNLLINASGILSIPEV 131
Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG 182
+ PETTLNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G R AVVA+LSARV
Sbjct: 132 IHPETTLNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVA 191
Query: 183 SIGDNRLGGWHSYRASKAALNH 204
SIGDNRLGGWHSYR+SKAALN
Sbjct: 192 SIGDNRLGGWHSYRSSKAALNQ 213
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555952|ref|XP_003546293.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 167/202 (82%), Gaps = 2/202 (0%)
Query: 5 LFAFRSIRKVAFTSSASASVKWKG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63
+ A S R ++ T A +S ++G GVS+VQGASRGIGLEF KQLLE +DK VIATCRN
Sbjct: 12 MMASHSPRILSLTRRAFSSCSFQGEGVSMVQGASRGIGLEFVKQLLENDDKEHVIATCRN 71
Query: 64 PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
P+ +TGL+ LK++F +RL +L LDLTVE++IEASA SI+E YG LNLLINASGILSIP V
Sbjct: 72 PSASTGLIHLKDKFADRLRILPLDLTVENSIEASALSIRETYGRLNLLINASGILSIPEV 131
Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG 182
+ PETTLNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G R AVVA+LSARV
Sbjct: 132 IHPETTLNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVA 191
Query: 183 SIGDNRLGGWHSYRASKAALNH 204
SIGDNRLGGWHSYR+SKAALN
Sbjct: 192 SIGDNRLGGWHSYRSSKAALNQ 213
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 231 | ||||||
| TAIR|locus:2121469 | 298 | AT4G20760 [Arabidopsis thalian | 0.852 | 0.661 | 0.753 | 3.6e-73 | |
| ZFIN|ZDB-GENE-040426-1502 | 262 | zgc:65997 "zgc:65997" [Danio r | 0.744 | 0.656 | 0.445 | 1.2e-33 | |
| UNIPROTKB|G5EI10 | 276 | MGCH7_ch7g551 "Short-chain deh | 0.744 | 0.623 | 0.333 | 7.2e-20 | |
| ZFIN|ZDB-GENE-050419-83 | 256 | si:dkey-12e7.4 "si:dkey-12e7.4 | 0.740 | 0.667 | 0.342 | 9.2e-20 | |
| ZFIN|ZDB-GENE-050417-323 | 255 | zgc:110339 "zgc:110339" [Danio | 0.787 | 0.713 | 0.341 | 1.2e-19 | |
| UNIPROTKB|F1N9C1 | 254 | LOC415661 "Uncharacterized pro | 0.770 | 0.700 | 0.381 | 1.9e-19 | |
| UNIPROTKB|F1NFS8 | 279 | LOC100857820 "Uncharacterized | 0.761 | 0.630 | 0.373 | 4e-19 | |
| UNIPROTKB|F1N9B0 | 263 | LOC769608 "Uncharacterized pro | 0.761 | 0.669 | 0.363 | 3.6e-18 | |
| UNIPROTKB|F1NGX9 | 415 | F1NGX9 "Uncharacterized protei | 0.766 | 0.426 | 0.371 | 3.5e-17 | |
| WB|WBGene00008986 | 249 | F20G2.2 [Caenorhabditis elegan | 0.705 | 0.654 | 0.340 | 8.6e-17 |
| TAIR|locus:2121469 AT4G20760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 150/199 (75%), Positives = 171/199 (85%)
Query: 7 AFRSIRKVAFTSSASASV-KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65
A + +R +S+S+SV WKGGVS+VQGASRGIGLEF +QLLE N G V+ATCRNP
Sbjct: 21 ALKRMRVSGLATSSSSSVPNWKGGVSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPK 80
Query: 66 GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ 125
AT L DLKNRF ERL + +LD+T E+TIE SA+S++EKYGSLNLLINA+GILSIP VLQ
Sbjct: 81 EATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVREKYGSLNLLINAAGILSIPGVLQ 140
Query: 126 PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI 184
PETTLNKVEKSSLMLAYEVNAVGPILV+KHM PLLK GG +G +R+VAVVANLSARVGSI
Sbjct: 141 PETTLNKVEKSSLMLAYEVNAVGPILVMKHMWPLLKAGGGSGTDREVAVVANLSARVGSI 200
Query: 185 GDNRLGGWHSYRASKAALN 203
GDNRLGGWHSYRASK+ALN
Sbjct: 201 GDNRLGGWHSYRASKSALN 219
|
|
| ZFIN|ZDB-GENE-040426-1502 zgc:65997 "zgc:65997" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 81/182 (44%), Positives = 119/182 (65%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LVQG+SRG+GLEF + LL +IATCRNP+ A L L + +RL VL+LD+
Sbjct: 4 VALVQGSSRGLGLEFCRYLLLNKSPAAIIATCRNPDAAHELSALSAQHADRLTVLRLDVN 63
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
E I+ +A+S+K +G ++L+IN+S +L P+ + ET+L V ++ N VGP
Sbjct: 64 REEDIKTAAESVKTAFGKVDLIINSSAMLH-PSG-KGETSLRDVSAQGVISTLTTNTVGP 121
Query: 150 ILVIKHMSPLLK--VGGTGI---ERDV---AVVANLSARVGSIGDNRLGGWHSYRASKAA 201
+++ K+ +PLL+ G G+ E+D ++ N++ARVGSIGDN LGGW+SYR SKAA
Sbjct: 122 LVMAKYFAPLLQRGTGAFGLQPPEKDKQHNGIMVNMTARVGSIGDNALGGWYSYRMSKAA 181
Query: 202 LN 203
LN
Sbjct: 182 LN 183
|
|
| UNIPROTKB|G5EI10 MGCH7_ch7g551 "Short-chain dehydrogenase/reductase SDR" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 63/189 (33%), Positives = 108/189 (57%)
Query: 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLL--DL---KNRFPERLDVL 84
+LV SRGIG + LL + ++ATCR+ P+G L DL ++ RL +
Sbjct: 6 ALVCPTSRGIGHHLTRALLRRTTLP-ILATCRSDPDGTKSALLADLPGDESSLSSRLHMA 64
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
++D+T E ++ A+A+S K+ + ++P VL+ + + V+ + + ++ +
Sbjct: 65 RIDVTDEDSVRAAAESCASKHFPREGGHHLRLAFALPGVLRVDKAVEHVDYAQTLDSFRI 124
Query: 145 NAVGPILVIKHMSPLLKVG----GT--GIERDV----AVVANLSARVGSIGDNRLGGWHS 194
N +GP++++KH + L G G+ G ++ V +V N+SARVGS+ DNR GGW++
Sbjct: 125 NTLGPLMLMKHFARFLPRGRSDMGSEGGDDKGVLPNHSVWVNMSARVGSVQDNRQGGWYT 184
Query: 195 YRASKAALN 203
YRASKAA+N
Sbjct: 185 YRASKAAVN 193
|
|
| ZFIN|ZDB-GENE-050419-83 si:dkey-12e7.4 "si:dkey-12e7.4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 65/190 (34%), Positives = 105/190 (55%)
Query: 32 LVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
++ GASRG+GL+ + L+ G +IAT RNPNGA L L + + + +++LD+
Sbjct: 12 MITGASRGLGLQIVESLVTGGFSPGKIIATARNPNGAKELQRLAEEY-QNIHIIKLDVIS 70
Query: 91 ESTIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
+ +IE +A ++E + LN LIN +GI + N+ ET V ++ + N+V
Sbjct: 71 QESIERAAAEVEELVQEEGLNCLINNAGINVVANL---ET----VTADQMLENFHTNSVA 123
Query: 149 PILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI----GDNR-LGGWHSYRASKA 200
P+++ K M PLLK GTG+ A V N+++ +GS+ GD W+ YR SK+
Sbjct: 124 PLMITKAMLPLLKRAAAKGTGMGIHRAAVINVTSLLGSVELYWGDRADTFKWYPYRTSKS 183
Query: 201 ALNHDKICVS 210
ALN C++
Sbjct: 184 ALNMVTRCLA 193
|
|
| ZFIN|ZDB-GENE-050417-323 zgc:110339 "zgc:110339" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 69/202 (34%), Positives = 112/202 (55%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
K G L+ GASRG+GL+ KQLL ++ +IAT RNP A L L P+ + ++
Sbjct: 7 KCGSVLITGASRGLGLQMVKQLLATPERPQKIIATVRNPAAAEELQKLAKAHPD-VHIVT 65
Query: 86 LDLTVESTIEASAKSIKEKYGS--LNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAY 142
LD++ E+++ A++++++ G+ LN LIN + I LS + L+ V + +M Y
Sbjct: 66 LDISNETSVNAASQAVEAIVGANGLNCLINNAAIGLS--------SDLDSVTRDVMMKTY 117
Query: 143 EVNAVGPILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI----GDNRLGGWHSY 195
E N V P+ V K + PLL+ G+G+ A V N+S+ +GS+ G+ ++Y
Sbjct: 118 ESNTVSPLFVTKALLPLLRRAAAEGSGMSIQRAAVVNVSSLLGSVQLNWGEGASFKSYAY 177
Query: 196 RASKAALNHDKICVSGVWSKEG 217
RASK+ALN C++ +G
Sbjct: 178 RASKSALNMVTRCLAADLEADG 199
|
|
| UNIPROTKB|F1N9C1 LOC415661 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 76/199 (38%), Positives = 106/199 (53%)
Query: 32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
LV GA+RGIGL F + LL N V ATCR+P G A L L ++ P L ++ L++
Sbjct: 5 LVTGANRGIGLGFVQHLLALSNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 63
Query: 89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
T ++I+A+A S+ E+ GS LNLLIN +GI N + ET + E Y N
Sbjct: 64 TDPASIKAAAASVGERLKGSGLNLLINNAGIARA-NTIDNETLKDMSE------VYTTNT 116
Query: 147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRL---GGWHSYRAS 198
+ P+L+ + P+LK G+G+ A + N+S+ GSI D L G SYR S
Sbjct: 117 IAPLLLSQAFLPMLKKAAQENPGSGLSCSKAAIINISSTAGSIQDLYLWQYGQALSYRCS 176
Query: 199 KAALNHDKICVSGVWSKEG 217
KAALN C S + + G
Sbjct: 177 KAALNMLTRCQSMGYREHG 195
|
|
| UNIPROTKB|F1NFS8 LOC100857820 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 75/201 (37%), Positives = 107/201 (53%)
Query: 32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
LV GA+RGIGL + LL N V ATCR+P G A L L ++ P L ++ L++
Sbjct: 30 LVTGANRGIGLGLVQHLLALPNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 88
Query: 89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
T ++I+A+A S+ E+ GS LNLLIN +G+L+ N L+ ET ++ Y N
Sbjct: 89 TDPASIKAAAASVGERLKGSGLNLLINNAGVLNA-NTLETETL------KDMLHVYTTNT 141
Query: 147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWH-----SYR 196
+ P+L+ + PLLK G+G+ A + N+S+ GSI L GW SYR
Sbjct: 142 IAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIVNISSIGGSISS--LTGWDVMELVSYR 199
Query: 197 ASKAALNHDKICVSGVWSKEG 217
SKAA N C S + + G
Sbjct: 200 CSKAAQNMLTRCQSMGYREHG 220
|
|
| UNIPROTKB|F1N9B0 LOC769608 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 73/201 (36%), Positives = 106/201 (52%)
Query: 32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
LV G +RGIGL + LL N V ATCR+P G A L L ++ P L ++ L++
Sbjct: 14 LVTGGNRGIGLGLVQHLLALPNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 72
Query: 89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
T ++I+A+A S+ E+ GS LNLLIN +G+L+ N L+ ET ++ Y N
Sbjct: 73 TDPASIKAAAASVGERLKGSGLNLLINNAGVLNA-NTLETETL------KDMLHVYTTNT 125
Query: 147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHS-----YR 196
+ P+L+ + PLLK G+G+ A + N+S+ GSI + L W S YR
Sbjct: 126 IAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIINMSSTAGSIKEVFL--WESAQCISYR 183
Query: 197 ASKAALNHDKICVSGVWSKEG 217
SKAA N C S + + G
Sbjct: 184 CSKAAQNMLTRCQSMGYREHG 204
|
|
| UNIPROTKB|F1NGX9 F1NGX9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 216 (81.1 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 75/202 (37%), Positives = 107/202 (52%)
Query: 31 SLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLD 87
+LV GA+RGIGL F + LL N V A CR+P G A L L ++ P L ++ L+
Sbjct: 6 ALVTGANRGIGLGFVQHLLALPNPPEWVFAGCRDPKGQRAQELQKLASKHPN-LVIVPLE 64
Query: 88 LTVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+T ++I+A+A S+ E+ GS LNLLIN +GI+ N L+ ET + E Y N
Sbjct: 65 VTDPASIKAAAASVGERLKGSGLNLLINNAGIVRA-NRLENETLKDMSE------VYTTN 117
Query: 146 AVGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHS-----Y 195
+ P+L+ + PLLK G+G+ A + N+S+ GSI + L W Y
Sbjct: 118 TIAPLLLGQAFLPLLKKAAQESPGSGMSCSKAAIVNISSNGGSIKEVYL--WEGIQAACY 175
Query: 196 RASKAALNHDKICVSGVWSKEG 217
R SKAALN C S + + G
Sbjct: 176 RCSKAALNMLTRCQSMGYREHG 197
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| WB|WBGene00008986 F20G2.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 62/182 (34%), Positives = 96/182 (52%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GA+RGIGL KQ L+ D +IATCR+P+ A L +LK+ RL +L LD+ +
Sbjct: 7 LITGANRGIGLGLLKQFLKHKDIQIIIATCRDPSKAEELSNLKD---SRLHILPLDIDCD 63
Query: 92 STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+I +++ G L +L+N +GIL +P ++ E + +L+ E N+V
Sbjct: 64 ESISKLYAEVEKLVGEDGLTVLLNNAGIL-LPYDVEGEKN-----RKTLIRQLETNSVST 117
Query: 150 ILVIKHMSPLLKV-----GGTGIERDVAVVANLSARVGSIG--DNRLGG-WHSYRASKAA 201
L+ + PLLK GG G + A + N+S+ S+ D G +YR SK+A
Sbjct: 118 ALITQEFLPLLKKAAAKNGGDGYSINRAAIVNISSTAASVEKIDGTFNGPLVAYRMSKSA 177
Query: 202 LN 203
LN
Sbjct: 178 LN 179
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.XI.1083.1 | hypothetical protein (264 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.XV.698.1 | hypothetical protein (578 aa) | • | • | 0.567 | ||||||
 | gw1.XV.1392.1 | hypothetical protein (167 aa) | • | 0.477 | |||||||
 | fgenesh4_pg.C_scaffold_147000065 | hypothetical protein (552 aa) | • | 0.464 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 231 | |||
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 6e-54 | |
| PRK09009 | 235 | PRK09009, PRK09009, C factor cell-cell signaling p | 3e-30 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 8e-26 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 2e-23 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-20 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-16 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 2e-16 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 3e-16 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 4e-16 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 2e-15 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 3e-15 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 3e-15 | |
| PRK06953 | 222 | PRK06953, PRK06953, short chain dehydrogenase; Pro | 1e-13 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 1e-13 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 7e-13 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 1e-12 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 1e-12 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 8e-12 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 1e-11 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 2e-11 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-11 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 4e-11 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 6e-11 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 7e-11 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 9e-11 | |
| cd08941 | 290 | cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas | 1e-10 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 3e-10 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-10 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-10 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 4e-10 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-10 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 7e-10 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 9e-10 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 1e-09 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 2e-09 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 2e-09 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 3e-09 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 3e-09 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 6e-09 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 7e-09 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-09 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 1e-08 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 1e-08 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 1e-08 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 1e-08 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-08 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 2e-08 | |
| PRK06197 | 306 | PRK06197, PRK06197, short chain dehydrogenase; Pro | 3e-08 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 3e-08 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-08 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 8e-08 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 1e-07 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 1e-07 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 2e-07 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 3e-07 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 4e-07 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 4e-07 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 4e-07 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 5e-07 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-07 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 6e-07 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 7e-07 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 8e-07 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 1e-06 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-06 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-06 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 1e-06 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 2e-06 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 2e-06 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 2e-06 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 2e-06 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 2e-06 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 2e-06 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 2e-06 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 2e-06 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 3e-06 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 3e-06 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 5e-06 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 5e-06 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 6e-06 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 2e-05 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 2e-05 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 2e-05 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 2e-05 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 2e-05 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-05 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 2e-05 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 2e-05 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 2e-05 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 3e-05 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 3e-05 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-05 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 5e-05 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 5e-05 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 6e-05 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 6e-05 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 9e-05 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 9e-05 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 1e-04 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 1e-04 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 1e-04 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 2e-04 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 2e-04 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 2e-04 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 2e-04 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 3e-04 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 3e-04 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 3e-04 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 3e-04 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 3e-04 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 4e-04 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 5e-04 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 5e-04 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 5e-04 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 6e-04 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 6e-04 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 8e-04 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 8e-04 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 0.001 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 0.001 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 0.001 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.001 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 0.001 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 0.001 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 0.001 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 0.002 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 0.002 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 0.002 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 0.002 | |
| cd09810 | 311 | cd09810, LPOR_like_SDR_c_like, light-dependent pro | 0.002 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 0.002 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 0.002 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 0.003 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 0.003 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 0.003 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 0.003 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 6e-54
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 18/174 (10%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GASRGIGLE +QLL VIATCR+P+ AT L L RL +L+LD+T
Sbjct: 2 LITGASRGIGLELVRQLLA-RGNNTVIATCRDPSAATELAALGASHS-RLHILELDVT-- 57
Query: 92 STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
I SA+++ E+ G L++LIN +GIL ++V+ L+ ++VN +GP
Sbjct: 58 DEIAESAEAVAERLGDAGLDVLINNAGILH------SYGPASEVDSEDLLEVFQVNVLGP 111
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+L+ + PLL G A + N+S+RVGSIGDN GGW+SYRASKAALN
Sbjct: 112 LLLTQAFLPLLLKGAR------AKIINISSRVGSIGDNTSGGWYSYRASKAALN 159
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-30
Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLT 89
L+ G S GIG KQLLE+ V AT R+ P+ + + LD+T
Sbjct: 4 LIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQH----------DNVQWHALDVT 53
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
E+ I K + E++ L+ LIN G+L + PE +L ++ + +N +
Sbjct: 54 DEAEI----KQLSEQFTQLDWLINCVGMLHTQD-KGPEKSLQALDADFFLQNITLNTLPS 108
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+L+ KH +P LK + A A +SA+VGSI DNRLGGW+SYRASKAALN
Sbjct: 109 LLLAKHFTPKLKQS------ESAKFAVISAKVGSISDNRLGGWYSYRASKAALN 156
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Length = 235 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 8e-26
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 21/171 (12%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ G S GIGL A L + + VIAT RNP L L + L+VL+LD+T E
Sbjct: 4 LITGCSSGIGLALALALAAQGYR--VIATARNP---DKLESLGELLNDNLEVLELDVTDE 58
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+I+A+ K + E++G +++L+N +G + ET++ +V + +EVN GP+
Sbjct: 59 ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLE--ETSIEEVREL-----FEVNVFGPLR 111
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
V + PL+ ++ + N+S+ G + LG Y ASKAAL
Sbjct: 112 VTRAFLPLM------RKQGSGRIVNVSSVAGLVPTPFLG---PYCASKAAL 153
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 2e-23
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--LQLD 87
V+LV GA+RGIG E +QL + G VI T R+ G ++ E L V QLD
Sbjct: 2 VALVTGANRGIGFEIVRQLAKSGP-GTVILTARDVE--RGQAAVEKLRAEGLSVRFHQLD 58
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T +++IEA+A ++EKYG L++L+N +GI + T + ++ + N
Sbjct: 59 VTDDASIEAAADFVEEKYGGLDILVNNAGI-AFKGFDDSTPTREQARET-----MKTNFF 112
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
G + V + + PLLK + + N+S+ +GS+ +Y SKAALN
Sbjct: 113 GTVDVTQALLPLLK------KSPAGRIVNVSSGLGSL-------TSAYGVSKAALN 155
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 2e-20
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
LV GAS GIG A++L + K V+ RN L ++ +Q D++ E
Sbjct: 2 LVTGASSGIGRAIARRLAREGAK--VVLADRNEEALAELAAIE-ALGGNAVAVQADVSDE 58
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+EA + E++G L++L+N +GI + E T ++ +VN G L
Sbjct: 59 EDVEALVEEALEEFGRLDILVNNAGIARPGPLE--ELTDEDWDR-----VLDVNLTGVFL 111
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ + P +K G G + N+S+ G L G +Y ASKAAL
Sbjct: 112 LTRAALPHMKKQGGG------RIVNISSVAGLRP---LPGQAAYAASKAALEG 155
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 1e-16
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
G V+LV GAS GIG A+ L + + V A A L +K R +
Sbjct: 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63
Query: 86 LDLT-VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D++ E ++EA + +E++G +++L+N +GI P+ L ++ + +V
Sbjct: 64 ADVSDDEESVEALVAAAEEEFGRIDILVNNAGI------AGPDAPLEELTEEDWDRVIDV 117
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N +G L+ + PL+K + N+S+ G G G +Y ASKAAL
Sbjct: 118 NLLGAFLLTRAALPLMKKQ---------RIVNISSVAGLGG---PPGQAAYAASKAALIG 165
|
Length = 251 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 2e-16
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GASRG+GL +LLE V AT R P T L L E+LD+
Sbjct: 5 LIIGASRGLGLGLVDRLLE--RGWQVTATVRGPQQDTALQALPGVHIEKLDMND------ 56
Query: 92 STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
AS + ++ +LL +GI + Q E L L NA+ P
Sbjct: 57 ---PASLDQLLQRLQGQRFDLLFVNAGISGPAH--QSAADATAAEIGQLFLT---NAIAP 108
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
I + + + + V+A +S+++GS+ G Y+ASKAALN
Sbjct: 109 IRLARRLLGQ-------VRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNS 156
|
Length = 225 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 3e-16
Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 27/177 (15%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
L+ G G G AK+L + G V+A C NG G +L+ +RL LQLD+T
Sbjct: 4 LITGCDSGFGNLLAKKL---DSLGFTVLAGCLTKNGP-GAKELRRVCSDRLRTLQLDVTK 59
Query: 91 ESTIEASAKSIKEKYGSLNL--LINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNA 146
I+ +A+ +KE G L L+N +GIL L P K EVN
Sbjct: 60 PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKC--------MEVNL 111
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
G + V K PLL+ R V N+S+ G + G Y ASKAA+
Sbjct: 112 FGTVEVTKAFLPLLR-------RAKGRVVNVSSMGGRVPFPAGGA---YCASKAAVE 158
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 4e-16
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG V LV GA+RGIG F +QLL + V A R+P T R+ LQL
Sbjct: 5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD-------LGPRVVPLQL 56
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T +++ A+A E + +L+N +GI ++L +L E N
Sbjct: 57 DVTDPASVAAAA----EAASDVTILVNNAGIFRTGSLLLEGDE------DALRAEMETNY 106
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
GP+ + + +P+L G G A+V LS V S + G +Y ASKAA
Sbjct: 107 FGPLAMARAFAPVLAANGGG-----AIVNVLS--VLSWVNFPNLG--TYSASKAAA 153
|
Length = 238 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 2e-15
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
K L+ GAS GIG A+ L + ++ RN L + +P R +
Sbjct: 2 DLKDKRVLLTGASGGIGQALAEALAAAGAR--LLLVGRNAEKLEALAA-RLPYPGRHRWV 58
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
DLT E+ EA +E G +N+LIN +G+ L + ++ +
Sbjct: 59 VADLTSEAGREAVLARARE-MGGINVLINNAGVNH-------FALLEDQDPEAIERLLAL 110
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N P+ + + + PLL+ + A+V N+ + GSIG G+ SY ASK AL
Sbjct: 111 NLTAPMQLTRALLPLLR------AQPSAMVVNVGSTFGSIG---YPGYASYCASKFAL 159
|
Length = 263 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 3e-15
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFP-ERLDVLQ 85
G V ++ GA+ GIG E A++L ++ VI CRN G ++K +++V+Q
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAH--VIIACRNEEKGEEAAAEIKKETGNAKVEVIQ 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LDL+ +++ A+ ++ L++LIN +GI++ P T + E L A VN
Sbjct: 59 LDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPR----RLTKDGFE---LQFA--VN 109
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--------RLGGWHSYRA 197
+G L+ + P+LK R + V++++ R G I N + +Y
Sbjct: 110 YLGHFLLTNLLLPVLKASAPS--R-IVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQ 166
Query: 198 SKAAL 202
SK A
Sbjct: 167 SKLAN 171
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 3e-15
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K LV GA+RGIG F + LL K V A R+P A L ++ +++ L+L
Sbjct: 2 KDKTVLVTGANRGIGKAFVESLLAHGAKK-VYAAVRDPGSAA---HLVAKYGDKVVPLRL 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T +I+A+A K+ ++++IN +G+L +L+ +L +VN
Sbjct: 58 DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGAL------EALKQEMDVNV 107
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + + + +P+LK G G A+V S V S+ + +Y ASK+A
Sbjct: 108 FGLLRLAQAFAPVLKANGGG-----AIVNLNS--VASLKN--FPAMGTYSASKSAA 154
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 1e-13
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GASRGIG EF +Q + VIAT R+ L L L LD+
Sbjct: 5 LIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQALGAE------ALALDVADP 56
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET-TLNKVEKSSLMLAYEVNAVGPI 150
+++ A + + +L+ + +G V P T + + + N +GP+
Sbjct: 57 ASVAGLAWKLDGE--ALDAAVYVAG------VYGPRTEGVEPITREDFDAVMHTNVLGPM 108
Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-NRLGGWHSYRASKAALN 203
++ + PL++ G V+A LS+R+GSIGD GW YRASKAALN
Sbjct: 109 QLLPILLPLVEAAG-------GVLAVLSSRMGSIGDATGTTGW-LYRASKAALN 154
|
Length = 222 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 1e-13
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 28/177 (15%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ G + GIGL A++ LE + VI T R L + K P + + LD+
Sbjct: 9 LITGGTSGIGLALARKFLEAGNT--VIITGRRE---ERLAEAKKELPN-IHTIVLDVGDA 62
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
++EA A+++ +Y +L++LIN +GI ++ P + L+K + + N +GPI
Sbjct: 63 ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE-----IDTNLIGPIR 117
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVG----SIGDNRLGGWHSYRASKAALNH 204
+IK P LK ++ A + N+S+ + + Y A+KAAL+
Sbjct: 118 LIKAFLPHLK------KQPEATIVNVSSGLAFVPMAANPV-------YCATKAALHS 161
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 7e-13
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQ 85
KG +L+ GAS GIG E AKQL + +I R + L +L+++ ++V+
Sbjct: 5 KGKTALITGASSGIGAELAKQLARRGYN--LILVARREDKLEALAKELEDKTGVEVEVIP 62
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
DL+ +E +KE+ G +++L+N +G + L E +L++ E+ M+ ++N
Sbjct: 63 ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL--ELSLDEEEE---MI--QLN 115
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAALNH 204
+ + K + P + G G ++ N +GS + + Y A+KA +
Sbjct: 116 ILALTRLTKAVLPGMVERGAG-----HII-N----IGSAAGLIPTPYMAVYSATKAFVLS 165
|
Length = 265 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 1e-12
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLT 89
++ GASRGIG A++LL++ V+ R+ L +LK R R+ ++ DL+
Sbjct: 3 ILTGASRGIGRALAEELLKRGSPSVVVLLARS---EEPLQELKEELRPGLRVTTVKADLS 59
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSS---LMLAYEVNA 146
+ +E ++I++ G +LLIN +G L ++K+E L +++N
Sbjct: 60 DAAGVEQLLEAIRKLDGERDLLINNAGSL---------GPVSKIEFIDLDELQKYFDLNL 110
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
P+ + + K G+++ V V++ +A N GW Y +SKAA +
Sbjct: 111 TSPVCLTSTLLRAFK--KRGLKKTVVNVSSGAAV------NPFKGWGLYCSSKAARDM 160
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V + GASRG G + + LE+ D+ V+AT R+ AT L DL ++ +RL L LD+T
Sbjct: 5 VWFITGASRGFGRAWTEAALERGDR--VVATARDT--AT-LADLAEKYGDRLLPLALDVT 59
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+ + A+ ++ E +G L++++N +G + +V +S + N G
Sbjct: 60 DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMI-------EEVTESEARAQIDTNFFGA 112
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ V + + P L+ +G ++ + +SA G Y ASK AL
Sbjct: 113 LWVTQAVLPYLREQRSGHIIQISSIGGISA-FPMSG--------IYHASKWAL 156
|
Length = 275 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 8e-12
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT- 89
++ G S+G+G A QLLEK VI+ R N L L ++ L LDL
Sbjct: 4 VIITGTSQGLGEAIANQLLEKGTH--VISISRTEN--KELTKLAEQYNSNLTFHSLDLQD 59
Query: 90 ---VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
+E+ SI+E S LIN +G+++ P + K E L+ +N
Sbjct: 60 VHELETNFNEILSSIQEDNVSSIHLINNAGMVA------PIKPIEKAESEELITNVHLNL 113
Query: 147 VGPILVI----KHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ P+++ KH KV V N+S+ G+ N GW +Y +SKA L
Sbjct: 114 LAPMILTSTFMKHTKD-WKVDKR--------VINISS--GA-AKNPYFGWSAYCSSKAGL 161
Query: 203 N 203
+
Sbjct: 162 D 162
|
Length = 251 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 1e-11
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+ L+ G GIG A + ++ K VI N GA + + ++ + D++
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAK-VVILD-INEKGAEETANNVRKAGGKVHYYKCDVS 58
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+ +AK IK++ G + +LIN +G++S +L E ++EK+ +EVN +
Sbjct: 59 KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLL--ELPDEEIEKT-----FEVNTLAH 111
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
K P + +ER+ + +++ G I L Y ASKAA
Sbjct: 112 FWTTKAFLPDM------LERNHGHIVTIASVAGLISPAGLA---DYCASKAAA 155
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 2e-11
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V+LV G + GIGL AK+L + V+ +P A + + R +Q D
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEG--AAVVVADIDPEIAE-KVAEAAQGGPRALGVQCD 57
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T E+ ++++ + ++G L+++++ +GI + + ET+L +S ++N
Sbjct: 58 VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIA--ETSLEDWNRS-----MDINLT 110
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKI 207
G LV + ++K G G +V N S + G N +Y A+KAA H
Sbjct: 111 GHFLVSREAFRIMKSQGIG----GNIVFNASKNAVAPGPNAA----AYSAAKAAEAHLAR 162
Query: 208 CVSGVWSKEG 217
C++ ++G
Sbjct: 163 CLALEGGEDG 172
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 4e-11
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G V+LV GASRGIG A++L + VI + GA L+ + +Q
Sbjct: 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQG 62
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
D++ ++E + K ++G +++L+N +GI +++ E ++V + N
Sbjct: 63 DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV--------IDTN 114
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + K ++ + +G ++ N+S+ VG +G+ +Y ASKA +
Sbjct: 115 LTGVFNLTKAVARPMMKQRSG-----RII-NISSVVGLMGNPGQA---NYAASKAGV 162
|
Length = 248 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 4e-11
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 20/179 (11%)
Query: 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
+K G L+ G + GIGL AK+ LE + VI RN L + K PE
Sbjct: 1 MKTTGNTILITGGASGIGLALAKRFLELGNT--VIICGRN---EERLAEAKAENPEIHTE 55
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
D+ + + +K++Y +LN+LIN +GI ++ E L+ E+
Sbjct: 56 -VCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE-----IA 109
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N + PI + + P L + + A + N+S+ + + Y A+KAA+
Sbjct: 110 TNLLAPIRLTALLLPHL------LRQPEATIINVSS---GLAFVPMASTPVYCATKAAI 159
|
Length = 245 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 6e-11
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LV GASRGIG A +L + K V T R+ A ++ L+ D++
Sbjct: 2 VALVTGASRGIGRAIALRLAAEGAK--VAVTDRSEEAAAETVEEIKALGGNAAALEADVS 59
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGI 117
+EA + ++ ++G +++L+N +GI
Sbjct: 60 DREAVEALVEKVEAEFGPVDILVNNAGI 87
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 7e-11
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LV GASRGIG+E A+ L + V RNP L ++ + D
Sbjct: 2 VALVTGASRGIGIEIARALARDGYR--VSLGLRNPEDLAALS----ASGGDVEAVPYDAR 55
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
A ++++++G +++L++ +GI +P T + L + +N + P
Sbjct: 56 DPEDARALVDALRDRFGRIDVLVHNAGI------GRPTTLRE-GSDAELEAHFSINVIAP 108
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+ + + P L+ G+G V + +LS G G Y ASK AL
Sbjct: 109 AELTRALLPALREAGSG---RVVFLNSLS---GKRVLAGNAG---YSASKFALR 153
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 9e-11
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLD 87
+++V GAS G GL +L +K VIAT RNP LL + + + V QLD
Sbjct: 5 IAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQQLD 62
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T +++I +KE G ++LL+N +G + V E + + K +E N
Sbjct: 63 VTDQNSIHNFQLVLKE-IGRIDLLVNNAGYANGGFV--EEIPVEEYRKQ-----FETNVF 114
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G I V + + P ++ ++ + N+S+ G +G L Y +SK AL
Sbjct: 115 GAISVTQAVLPYMR------KQKSGKIINISSISGRVGFPGLS---PYVSSKYAL 160
|
Length = 280 |
| >gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 1e-10
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC---VIATCRN-PNGATGLLDLKNRFPE---RLD 82
V LV GA+ G+GL ++LL ++D+ +I CRN L P+ D
Sbjct: 3 VVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFD 62
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLN-LLINA-----SGILSIPNVL------------ 124
+ +DL+ ++ A+AK +K++Y L+ L +NA GI I +
Sbjct: 63 YVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTN 122
Query: 125 -----QPETTLNKVEKS---SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176
Q E L++ +K+ L ++ N G +I+ + PLL G + + ++
Sbjct: 123 PTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQ--IIWTSS 180
Query: 177 LSARVG--SIGD-NRLGGWHSYRASKAALN 203
L+A S+ D L G Y +SK ++
Sbjct: 181 LNASPKYFSLEDIQHLKGPAPYSSSKYLVD 210
|
3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 3e-10
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
+G V ++ GAS GIG E A L G ++ + R L ++K+ E
Sbjct: 2 QGKVVIITGASSGIGEELAYHL---ARLGARLVLSARREER---LEEVKSECLELGAPSP 55
Query: 83 -VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
V+ LD++ E + + +G L++LIN +GI S+ ++ +T+++ K +M
Sbjct: 56 HVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI-SMRSLFH-DTSIDVDRK--IM-- 109
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
EVN GP+ + K P L G + VV++++ ++G + +Y ASK A
Sbjct: 110 -EVNYFGPVALTKAALPHLIERSQGS---IVVVSSIAGKIG------VPFRTAYAASKHA 159
Query: 202 L 202
L
Sbjct: 160 L 160
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-10
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+ V LV GA+ GIG ++ D+ V+ RN A D L +
Sbjct: 4 QSRVVLVTGAAGGIGRAACQRFARAGDQ--VVVADRNVERARERAD---SLGPDHHALAM 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D++ E+ I + + ++G +++L+N +G+ +TTL + + +N
Sbjct: 59 DVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFAR-----LQAINL 113
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G LV + L+ G G A + N+++ G + L +Y ASKAA+
Sbjct: 114 TGAYLVAREALRLMIEQGHG-----AAIVNVASGAGLVA---LPKRTAYSASKAAV 161
|
Length = 520 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-10
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
V + G +RGIG A + D+ ++ R+ GA L + E L +Q D
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDR--LLIIDRDAEGAKKLAEALG--DEHL-SVQAD 323
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSI--PNVLQPETTLNKVEKSSLMLAYEVN 145
+T E+ +E++ I+ ++G L++L+N +GI + P++ Q +V Y+VN
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRV--------YDVN 375
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHD 205
G + + L+ GG V+ NL + + L ++Y ASKAA+
Sbjct: 376 LSGAFACARAAARLMSQGG--------VIVNLGSIASLLA---LPPRNAYCASKAAVTML 424
Query: 206 KICVSGVWSKEG 217
++ W+ G
Sbjct: 425 SRSLACEWAPAG 436
|
Length = 520 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 4e-10
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+++ G + GIGL AK LL+K I GA L N + +Q D+T
Sbjct: 2 VAIITGGASGIGLATAKLLLKKG-AKVAILDRNENPGAAAELQAINPKVKAT-FVQCDVT 59
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+ A+ K EK+G +++LIN +GIL + L EK+ +VN G
Sbjct: 60 SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKT-----IDVNLTGV 114
Query: 150 I----LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS------YRASK 199
I L + +M GG G V+ N +GS+ G + Y ASK
Sbjct: 115 INTTYLALHYMD--KNKGGKG-----GVIVN----IGSV-----AGLYPAPQFPVYSASK 158
Query: 200 AALNH 204
+
Sbjct: 159 HGVVG 163
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 6e-10
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
G V++V GAS GIG A+ L ++ G VIA N A LL+ +
Sbjct: 4 MGKVAIVTGASGGIGRAIAELLAKE---GAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ D++ E +E + I EK+G +++L+N +GI + L + T + ++ ++ V
Sbjct: 61 KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNF--GLVTDMTDEEWDR---VID--V 113
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVV-ANLSARVGSIGDNRLGGWHSYRASKAALN 203
N G +L+ ++ P + +G+ +++ + + A + Y ASK A+N
Sbjct: 114 NLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVL----------YSASKGAVN 163
|
Length = 247 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 7e-10
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDV 83
G L+ G S GIG AK+L+++ VI R+ + + N +++
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGAN--VIIVARSESKLEEAVEEIEAEANASGQKVSY 58
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
+ DL+ +E + EK G +L++N +GI SIP + + + T + E+ +
Sbjct: 59 ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGI-SIPGLFE-DLTAEEFERG-----MD 111
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
VN G + V + PL+K G + V++ +A VG G+ +Y SK AL
Sbjct: 112 VNYFGSLNVAHAVLPLMKEQRPG---HIVFVSSQAALVGIY------GYSAYCPSKFALR 162
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 9e-10
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
LV GA++GIG A+ L E + V A RN L+ R+ +LD+
Sbjct: 2 LVTGAAQGIGYAVARALAEAGAR--VAAVDRNFEQLLELVADLRRYGYPFATYKLDVADS 59
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+ ++ + ++ +YG +++L+N +GIL + + + + + + VN G
Sbjct: 60 AAVDEVVQRLEREYGPIDVLVNVAGILRLGAID--SLSDEDWQAT-----FAVNTFGVFN 112
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
V + +SP +K +G + V + +A V +G + Y ASKAAL
Sbjct: 113 VSQAVSPRMKRRRSGA---IVTVGSNAANVPRMG---MAA---YAASKAAL 154
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-09
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-- 89
+V G SRG+G A+QLL+ +A R+P L ERL ++LDL+
Sbjct: 5 IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-------SLAAAAGERLAEVELDLSDA 57
Query: 90 --VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+ + + S LLIN +G ++P L ++ +++ A +N
Sbjct: 58 AAAAAWLAGDLLAAFVDGASRVLLINNAG------TVEPIGPLATLDAAAIARAVGLNVA 111
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
P+++ + L + ER + +++ +AR N GW Y A+KAAL+H
Sbjct: 112 APLML---TAALAQAASDAAERRILHISSGAAR------NAYAGWSVYCATKAALDH 159
|
Length = 243 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 2e-09
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 29/177 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V GA++GIG A +E VI + L
Sbjct: 7 SGKTVWVTGAAQGIGYAVALAFVEAG--AKVIGFDQAFLTQEDY---------PFATFVL 55
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D++ + + + + + G L++L+NA+GIL + + +++ + VNA
Sbjct: 56 DVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGAT--DSLSDEDWQQT-----FAVNA 108
Query: 147 VGPILVIKHMSPLLKVGGTG-IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + + + P + +G I V V +N +A V I G +Y ASKAAL
Sbjct: 109 GGAFNLFRAVMPQFRRQRSGAI---VTVGSN-AAHVPRI------GMAAYGASKAAL 155
|
Length = 252 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 2e-09
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQ 85
KG V+L+ GAS GIG A+ L E K V+ R L L + L
Sbjct: 5 KGKVALITGASSGIGEATARALAEAGAK--VVLAARR---EERLEALADEIGAGAALALA 59
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LD+T + +EA+ +++ E++G +++L+N +G+ P + ++ M+ + N
Sbjct: 60 LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLAL----GDPLDEAD-LDDWDRMI--DTN 112
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAA 201
G + + + P + +ER + NL GSI + Y A+KAA
Sbjct: 113 VKGLLNGTRAVLPGM------VERKSGHIINL----GSIAGRYPYPGGAVYGATKAA 159
|
Length = 246 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 3e-09
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERL 81
+ G V+++ G + GIG A+ L K+ VIA + G A L D F
Sbjct: 1 RLDGKVAIITGGASGIGEATAR-LFAKHGARVVIADIDDDAGQAVAAELGDPDISF---- 55
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
+ D+TVE+ + A+ + ++G L+++ N +G+L P ET+L + E+
Sbjct: 56 --VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERV----- 108
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
+VN G L KH + ++ G VA VA + +G H+Y ASK A
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP---------HAYTASKHA 159
Query: 202 L 202
+
Sbjct: 160 V 160
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 3e-09
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 17/192 (8%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG V++V G SRGIGL A+ L E I P +L ++ + +
Sbjct: 7 KGKVAIVTGGSRGIGLAIARALAE-AGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
D++ + ++E + K I++ +G +++LI +GI L NKV +VN
Sbjct: 66 DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKV--------IDVN 117
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHD 205
G + + + K G G + + A++S + NR +Y ASKAA+ H
Sbjct: 118 LNGVFNCAQAAAKIFKKQGKG---SLIITASMSGTIV----NRPQPQAAYNASKAAVIHL 170
Query: 206 KICVSGVWSKEG 217
++ W+K
Sbjct: 171 AKSLAVEWAKYF 182
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 6e-09
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V+LV GA+ GIG AK+L + CV+ + A P+R + D
Sbjct: 422 GKVALVTGAAGGIGKATAKRLAAEG--ACVVLADLDEEAAEAAAAELGG-PDRALGVACD 478
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T E+ ++A+ + +G ++++++ +GI + ET+ +S ++VNA
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIE--ETSDEDWRRS-----FDVNAT 531
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVAN---LSARVGSIGDNRLGGWHSYRASKAALNH 204
G LV + ++K G G + +A+ ++ Y A+KAA H
Sbjct: 532 GHFLVAREAVRIMKAQGLG--GSIVFIASKNAVNPGPNFGA---------YGAAKAAELH 580
|
Length = 681 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 7e-09
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GA + IGL A LL + VI + R A + L+ +Q D +
Sbjct: 6 LITGAGQRIGLALAWHLLAQGQP--VIVSYRTHYPA--IDGLRQA---GAQCIQADFSTN 58
Query: 92 STIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
+ I A +K+ L +I NAS L+ L + M+ VNA P
Sbjct: 59 AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLAR------MMQIHVNA--PY 110
Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
L+ + LL+ G D+ + + GS D + Y ASKAAL+
Sbjct: 111 LLNLALEDLLRGHGHAA-SDIIHITDYVVEKGS--DKHIA----YAASKAALD 156
|
Length = 236 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 9e-09
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V++V GAS GIG A++ + + V+ T RN A + R + D
Sbjct: 5 GKVAIVTGASSGIGEGIARRFAAEGAR--VVVTDRNEEAAERVAAEI-LAGGRAIAVAAD 61
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
++ E+ +EA+ + E++GS+++L+N +G L + + ++ + VN
Sbjct: 62 VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPL-LDVDEAEFDR-----IFAVNVK 115
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
P L + P ++ G G +VA A L R G GW Y ASK A+
Sbjct: 116 SPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG-------LGW--YNASKGAVIT 163
|
Length = 251 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 1e-08
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQ 85
KG V++V G + G+GL ++LL + K VI N G T L RF +
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAK-VVILDLPNSPGETVAKLGDNCRF------VP 53
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL----QPETTLNKVEKSSLMLA 141
+D+T E ++A+ K K+G L++++N +GI Q +L ++
Sbjct: 54 VDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQR-----V 108
Query: 142 YEVNAVGPILVIKHMSPLL--KVGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRAS 198
VN +G VI+ + + G ER V + A+++A G IG +Y AS
Sbjct: 109 INVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQA------AYSAS 162
Query: 199 KAALN 203
K +
Sbjct: 163 KGGIV 167
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 1e-08
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 24/179 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
KG V+LV GASRGIG A L E G ++ RN A L +
Sbjct: 4 KGKVALVTGASRGIGFGIASGLAE---AGANIVINSRNEEKAEEAQQLIEKEGVEATAFT 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
D++ E I+A+ ++I+E +G +++L+N +GI+ + PE V +L + V
Sbjct: 61 CDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAAL 202
+ V +HM I++ + N + S+ G Y ASK +
Sbjct: 121 SQ----AVARHM----------IKQGHGKIIN----ICSLLSELGGPPVPAYAASKGGV 161
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 1e-08
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 17/176 (9%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V+LV GA+RGIG A +L + VI + A +L + Q+D
Sbjct: 6 GRVALVTGAARGIGRAIAVRLAADGAE--VIVVDICGDDAAATAELVEAAGGKARARQVD 63
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+ + ++A+ + E +G L++L+ +GI P T +++ +VN
Sbjct: 64 VRDRAALKAAVAAGVEDFGRLDILVANAGIF-------PLTPFAEMDDEQWERVIDVNLT 116
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
G L+ + P L G G + S+ G G Y ASKA L
Sbjct: 117 GTFLLTQAALPALIRAGGG------RIVLTSSVAGPRVGYP--GLAHYAASKAGLV 164
|
Length = 251 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-08
Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 46/197 (23%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+L+ GASRGIG A++L + ++ R A L +L P +DLT
Sbjct: 5 TALITGASRGIGAAIARELAPTHT---LLLGGRP---AERLDELAAELP-GATPFPVDLT 57
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAYEVNA 146
I A+ + + L++L++ +G+ L V +S++ EVN
Sbjct: 58 DPEAIAAAVEQLGR----LDVLVHNAGV----------ADLGPVAESTVDEWRATLEVNV 103
Query: 147 VGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL--- 202
V P + + + P L+ G V N A G GW SY ASK AL
Sbjct: 104 VAPAELTRLLLPALRAAHGH------VVFINSGA-----GLRANPGWGSYAASKFALRAL 152
Query: 203 -------NHDKICVSGV 212
+ V+ V
Sbjct: 153 ADALREEEPGNVRVTSV 169
|
Length = 227 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG V++V G +RG+GL A+ L+ + K V+ + + L
Sbjct: 4 KGKVAIVTGGARGLGLAHARLLVAEGAK--VVLSDILDEEGQAAAA---ELGDAARFFHL 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T E A + +E +G L++L+N +GIL+ V ETT + E L+ ++N
Sbjct: 59 DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTV---ETTTLE-EWRRLL---DINL 111
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
G L + + P +K G G + N+S+ G +GD L Y ASK A
Sbjct: 112 TGVFLGTRAVIPPMKEAGGG------SIINMSSIEGLVGDPALAA---YNASKGA 157
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-08
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ G S G G A+ L + V+ T R+ D + P+R LD+T
Sbjct: 8 LITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARA---DFEALHPDRALARLLDVTDF 62
Query: 92 STIEASAKSIKEKYGSLNLLINASGI--LSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
I+A + +G +++L+N +G E+ L ++ + +EVN G
Sbjct: 63 DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIE----ESPLAEMRRQ-----FEVNVFGA 113
Query: 150 ILVIKHMSP 158
+ + K + P
Sbjct: 114 VAMTKAVLP 122
|
Length = 277 |
| >gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 3e-08
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 21 SASVKW--------KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLL 71
KW G V++V GA+ G+G E A L K V+ RN + G
Sbjct: 1 MKMTKWTAADIPDQSGRVAVVTGANTGLGYETAAALAAKGAH--VVLAVRNLDKGKAAAA 58
Query: 72 DLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
+ P + + +LDLT +++ A+A +++ Y ++LLIN +G++ P
Sbjct: 59 RITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP 109
|
Length = 306 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V++V GA G G A++ ++ + VIA N +GA + E +Q D
Sbjct: 5 GKVAIVTGAGSGFGEGIARRFAQEGAR-VVIAD-INADGAERVAA---DIGEAAIAIQAD 59
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T + +EA ++ K+G L++L+N +GI +P + +V++ + VN
Sbjct: 60 VTKRADVEAMVEAALSKFGRLDILVNNAGITHRN---KP---MLEVDEEEFDRVFAVNVK 113
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
L + + P ++ G G+ ++A A L R G W Y ASK +
Sbjct: 114 SIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLT-------W--YNASKGWVV 160
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 4e-08
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+G +LV GASRGIG A +L G V+ N A L VL
Sbjct: 4 QGKTALVTGASRGIGRAIALRLAA---DGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAY 142
D++ E+ + A ++ E +G+L++L+N +GI T + + S
Sbjct: 61 FDVSDEAAVRALIEAAVEAFGALDILVNNAGI----------TRDALLPRMSEEDWDRVI 110
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+VN G V++ P + G +V N+S+ G G N G +Y A+KA +
Sbjct: 111 DVNLTGTFNVVRAALPPMIKARYG-----RIV-NISSVSGVTG-NP--GQTNYSAAKAGV 161
|
Length = 246 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 8e-08
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
G V+LV GASRGIG AK+L G V+ + A ++ + +
Sbjct: 2 AGKVALVTGASRGIGRAIAKRLAR---DGASVVVNYASSKAAAEEVVAEIEAAGGKAIAV 58
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
Q D++ S + + ++ +G +++L+N +G++ + +P ++ E + V
Sbjct: 59 QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVM----LKKPIAETSEEEFDRMF---TV 111
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N G V++ + L+ GG I N+S+ S+ + +Y SKAA+
Sbjct: 112 NTKGAFFVLQEAAKRLRDGGRII--------NISS---SLTAAYTPNYGAYAGSKAAVEA 160
Query: 205 DKICVSGVWSKE 216
+ V +KE
Sbjct: 161 ----FTRVLAKE 168
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 1e-07
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
KG V+L+ G S+GIG A+ LL + K V T R+ L N+ + L
Sbjct: 5 KGKVALITGGSKGIGFAIAEALLAEGYK--VAITARDQKELEEAAAELNNK--GNVLGLA 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D+ E+ ++ + +I +G L++LI +G+ P L E+ L++ + N
Sbjct: 61 ADVRDEADVQRAVDAIVAAFGGLDVLIANAGV----GHFAPVEELT-PEEWRLVI--DTN 113
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
G IK P LK GG I N+S+ G+ N G +Y ASK L
Sbjct: 114 LTGAFYTIKAAVPALKRGGGYI-------INISSLAGT---NFFAGGAAYNASKFGLV 161
|
Length = 237 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-07
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+ GAS G G ++LL + D+ V AT R P+ L DLK R+ +RL VLQLD+T
Sbjct: 6 FITGASSGFGRGMTERLLARGDR--VAATVRRPDA---LDDLKARYGDRLWVLQLDVTDS 60
Query: 92 STIEASAKSIKEKYGSLNLLINASG 116
+ + A G ++++++ +G
Sbjct: 61 AAVRAVVDRAFAALGRIDVVVSNAG 85
|
Length = 276 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-07
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 29/197 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPER---LD 82
+G +LV G ++GIG ++L G + TC RN L + E+ ++
Sbjct: 5 EGKTALVTGGTKGIGYAIVEELAG---LGAEVYTCARNQKELDECLT---EWREKGFKVE 58
Query: 83 VLQLDLTVESTIEASAKSIKEKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
D++ S + ++ +G LN+L+N +G ++ E E SL+++
Sbjct: 59 GSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGT-----NIRKEAKDYTEEDYSLIMS 113
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA-RVGSIGDNRLGGWHSYRASKA 200
A + + H PLLK G G ++ VA + A G+ Y A+K
Sbjct: 114 TNFEAAYHLSRLAH--PLLKASGNGNIVFISSVAGVIAVPSGAP----------YGATKG 161
Query: 201 ALNHDKICVSGVWSKEG 217
ALN ++ W+K+
Sbjct: 162 ALNQLTRSLACEWAKDN 178
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 3e-07
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 26/181 (14%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V ++ GASRGIG A E+ C + RN + A ++ R + D+
Sbjct: 4 VMIITGASRGIGAATALLAAERGYAVC-LNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
E+ + +++ + G L+ L+N +GI L+ + L +++ + L + N VG
Sbjct: 63 DEADVLRLFEAVDRELGRLDALVNNAGI------LEAQMRLEQMDAARLTRIFATNVVGS 116
Query: 150 IL----VIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAAL 202
L +K MS + GG G + N+S AR+GS G+ + Y ASK A+
Sbjct: 117 FLCAREAVKRMST--RHGGRG-----GAIVNVSSMAARLGSPGE-----YIDYAASKGAI 164
Query: 203 N 203
+
Sbjct: 165 D 165
|
Length = 248 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 25/177 (14%)
Query: 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQL 86
+LV GASRGIG A+ L + + V R+ L+ DV
Sbjct: 1 KAALVTGASRGIGEATARLLHAEGYR--VGICARDEARLAAAAAQELEGVLGLAGDVRD- 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
E+ + + +++E +G L+ L+N +G+ V++P L E ++
Sbjct: 58 ----EADVRRAVDAMEEAFGGLDALVNNAGV----GVMKPVEELTPEEWRLVLD--TNLT 107
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+ K LL+ GG + N+ + G N G +Y ASK L
Sbjct: 108 GAFYCIHKAAPALLRRGG-------GTIVNVGSLAGK---NAFKGGAAYNASKFGLL 154
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 4e-07
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 41/198 (20%)
Query: 17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVI--------ATCRNPNGAT 68
++S+ S + G V+LV G + GIG + + K C++ C + G
Sbjct: 7 SASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEP 66
Query: 69 GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET 128
+ D+TVE + + +K+G+L++++N +G+ P
Sbjct: 67 NVC-----------FFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG-----PPCP 110
Query: 129 TLNKVEKSSLMLAYEVNAVGPILVIKH----MSPLLKVGGTGIERDVAVVANLSARVGSI 184
+ VE S ++VN G L +KH M PL K G+ + + ++++ +G +
Sbjct: 111 DIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK--GSIVS-----LCSVASAIGGL 163
Query: 185 GDNRLGGWHSYRASKAAL 202
G H+Y SK A+
Sbjct: 164 GP------HAYTGSKHAV 175
|
Length = 280 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 4e-07
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG V+LV GA+ GIGLE A L ++ K VIA + A L+ + + V +
Sbjct: 3 KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGV-AM 60
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T E I A E +G +++L+N +GI + + T EK M+A +
Sbjct: 61 DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPT-----EKWKKMIA--IML 113
Query: 147 VGPILVIKHMSPLLKVGGTG 166
G L K P++K G G
Sbjct: 114 DGAFLTTKAALPIMKAQGGG 133
|
Length = 258 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 5e-07
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+G V++V GA GIG A +L +G V+ + A ++ + L+
Sbjct: 2 EGKVAIVTGAGAGIGAACAARL---AREGARVVVADIDGGAAQAVVA---QIAGGALALR 55
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+D+T E + A + E++G L+LL+N +G + + + +T L +++ +N
Sbjct: 56 VDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAII-DTDLAVWDQT-----MAIN 109
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
G L +H +P + G G + NLS+ G GD G+ +Y ASKAA+
Sbjct: 110 LRGTFLCCRHAAPRMIARGGG------SIVNLSSIAGQSGD---PGYGAYGASKAAIR 158
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-07
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERL 81
S+++KG V+L+ G +RGIG A+ L + K V N A +L+ +
Sbjct: 2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAV-----LYNSAENEAKELREKGVF-- 54
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
++ D+ ++ S + +++++G +++L+N +GI+ L P ++ EK + M+
Sbjct: 55 -TIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM----YLMPFEEFDE-EKYNKMI- 107
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGI 167
++N G I PLLK+ G
Sbjct: 108 -KINLNGAIYTTYEFLPLLKLSKNGA 132
|
Length = 255 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 6e-07
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDL 88
++LV GA RGIG A++LL + VIAT + N + F E ++ + +LD+
Sbjct: 4 IALVTGAKRGIGSAIARELLNDGYR--VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGI 117
T + I+E+ G +++L+N +GI
Sbjct: 62 TDTEECAEALAEIEEEEGPVDILVNNAGI 90
|
Length = 245 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 7e-07
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDLKNRFPERLDVLQL 86
++LV G SRGIG A L ++ G +A +N + A +++L + + VLQ
Sbjct: 2 AIALVTGGSRGIGRATALLLAQE---GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQA 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D++ E+ + A +I + L L+N +GIL + T+ + + N
Sbjct: 59 DISDENQVVAMFTAIDQHDEPLAALVNNAGILF------TQCTVENLTAERINRVLSTNV 112
Query: 147 VGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G L +K M+ LK GG+G + V++ ++R+G+ G+ + Y ASK A+
Sbjct: 113 TGYFLCCREAVKRMA--LKHGGSG--GAIVNVSSAASRLGAPGE-----YVDYAASKGAI 163
Query: 203 N 203
+
Sbjct: 164 D 164
|
Length = 247 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 8e-07
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 37/190 (19%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
LV GA++GIGL + +L + G VI R+ FP L DL
Sbjct: 7 LVTGATKGIGLALSLRL---ANLGHQVIGIARSAIDD---------FPGEL--FACDLAD 52
Query: 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
A+ I E + ++ ++N GI ++P QP L K++ ++L Y++N +
Sbjct: 53 IEQTAATLAQINEIHP-VDAIVNNVGI-ALP---QP---LGKIDLAALQDVYDLNVRAAV 104
Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVS 210
V + +K+ G + N+ +R +R SY A+K+AL + +
Sbjct: 105 QVTQAFLEGMKLREQG------RIVNICSRAIFGALDRT----SYSAAKSAL----VGCT 150
Query: 211 GVWSKEGSSY 220
W+ E + Y
Sbjct: 151 RTWALELAEY 160
|
Length = 234 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 1e-06
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G + LV G SRGIG A+ LE + VI + R A D + + +
Sbjct: 5 AGKIVLVTGGSRGIGRMIAQGFLEAGAR--VIISARK---AEACADAAEELSAYGECIAI 59
Query: 87 --DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYE 143
DL+ E IEA + E+ L++L+N +G + PE+ +KV +
Sbjct: 60 PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKV--------MD 111
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW---HSYRASKA 200
+N + + + PLL+ T + A V N +GSI + +SY ASKA
Sbjct: 112 INVKSVFFLTQALLPLLRAAATA--ENPARVIN----IGSI-AGIVVSGLENYSYGASKA 164
Query: 201 AL 202
A+
Sbjct: 165 AV 166
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 1e-06
Identities = 30/183 (16%), Positives = 57/183 (31%), Gaps = 33/183 (18%)
Query: 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQ 85
G L+ G + G+GL A+ L + + A G +L + V
Sbjct: 1 GTVLITGGTGGLGLALARWLAAE--GARHLVLVSRRGPAPGAAELVAELEALGAEVTVAA 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-QPETTLNKVEKSSLMLAYEV 144
D+ + A ++ G L+ +++ +G+L + +V
Sbjct: 59 CDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERV--------LAP 110
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAA 201
G + + D+ S +GS G +Y A+ AA
Sbjct: 111 KVTGAWNLHELTRD----------LDLGAFVLFSSVAGVLGS------PGQANYAAANAA 154
Query: 202 LNH 204
L+
Sbjct: 155 LDA 157
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 42/183 (22%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GL-LDLKNRFPERL 81
++ L+ GA+ GIGL A+ L GA G+ K
Sbjct: 2 EFMTKTVLITGAASGIGLAQARAFLA--------------QGAQVYGVDKQDKPDLSGNF 47
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSLM 139
LQLDL+ + + + + S+++L N +GIL + +P +T+L + +
Sbjct: 48 HFLQLDLSDD------LEPLFDWVPSVDILCNTAGIL---DDYKPLLDTSLEEWQH---- 94
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
++ N L+ + P + +GI ++ +A+ A G GG +Y ASK
Sbjct: 95 -IFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA--G-------GGGAAYTASK 144
Query: 200 AAL 202
AL
Sbjct: 145 HAL 147
|
Length = 235 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPE-RLDVLQ 85
G ++V GAS G+GL A++L + VI RN G + ++ P+ +L +
Sbjct: 14 GKRAVVTGASDGLGLGLARRLAAAGAE--VILPVRNRAKGEAAVAAIRTAVPDAKLSLRA 71
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LDL+ +++ A + ++ + ++LLIN +G+++ P + +TT + E L + N
Sbjct: 72 LDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPP---ERQTTADGFE-----LQFGTN 123
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
+G + H+ PLL+ G V ++++AR G+I + L SY +A
Sbjct: 124 HLGHFALTAHLLPLLRAGRA----RVTSQSSIAARRGAINWDDLNWERSYAGMRA 174
|
Length = 313 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 42/177 (23%), Positives = 63/177 (35%), Gaps = 22/177 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL-- 84
G LV G + GIG A+ E + V L V
Sbjct: 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE------AALAATAARLPGAKVTAT 63
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D+ + +E + E++G L++L+N +GI P ++++ V
Sbjct: 64 VADVADPAQVERVFDTAVERFGGLDVLVNNAGIAG------PTGGIDEITPEQWEQTLAV 117
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
N G + PLLK G G V+ LS+ G +G G Y ASK A
Sbjct: 118 NLNGQFYFARAAVPLLKASGHG-----GVIIALSSVAGRLG---YPGRTPYAASKWA 166
|
Length = 264 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V+LV GAS GIG A++L G V T RNP A + +++L+
Sbjct: 3 NSKVALVTGASSGIGRATAEKLAR---AGYRVFGTSRNPARAAPI--------PGVELLE 51
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA---Y 142
LD+T +++++A+ + + G +++L+N +G+ E+SS+ A +
Sbjct: 52 LDVTDDASVQAAVDEVIARAGRIDVLVNNAGV----------GLAGAAEESSIAQAQALF 101
Query: 143 EVNAVGPILVIKHMSPLLKVGGTG 166
+ N G + + + + P ++ G+G
Sbjct: 102 DTNVFGILRMTRAVLPHMRAQGSG 125
|
Length = 270 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTV 90
L+ GAS GIG A++ + K +I T R L D L +FP ++ LQLD++
Sbjct: 4 LITGASSGIGEATARRFAKAGAK--LILTGRRAERLQELADELGAKFPVKVLPLQLDVSD 61
Query: 91 ESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+IEA+ +++ E++ +++L+N +G+ L + E L E M+ + N G
Sbjct: 62 RESIEAALENLPEEFRDIDILVNNAGLALGLDPA--QEADLEDWET---MI--DTNVKGL 114
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
+ V + + P++ I R+ + NL GSI G G + Y A+KAA+
Sbjct: 115 LNVTRLILPIM------IARNQGHIINL----GSIAGRYPYAGGNVYCATKAAVR 159
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 39/184 (21%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V++V G + GIG A+ K + V R+ + A L L D
Sbjct: 15 GKVAVVTGGASGIGHAIAELFAAKGAR--VALLDRSEDVAEVAAQLL---GGNAKGLVCD 69
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP---------ETTLNKVEKSSL 138
++ ++EA+ ++ +G +++L+N++G+ +L P + T++ K S
Sbjct: 70 VSDSQSVEAAVAAVISAFGRIDILVNSAGVA----LLAPAEDVSEEDWDKTIDINLKGSF 125
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
++A AVG +HM + GG I NL+++ G + L +Y AS
Sbjct: 126 LMA---QAVG-----RHM---IAAGGGKI-------VNLASQAGVVA---LERHVAYCAS 164
Query: 199 KAAL 202
KA +
Sbjct: 165 KAGV 168
|
Length = 255 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVLQLD 87
V L+ G S GIGL A +L K V AT R+ L + L+ LQLD
Sbjct: 2 VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLD 61
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+ ++ A+ + + E +++L+ +G+ +L P L++ +S+ +VN
Sbjct: 62 VCDSKSVAAAVERVTE--RHVDVLVCNAGV----GLLGPLEALSEDAMASVF---DVNVF 112
Query: 148 GPILVIKHMSPLLKVGGTG 166
G + +++ P +K G+G
Sbjct: 113 GTVRMLQAFLPDMKRRGSG 131
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
Query: 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER 80
+ + + G LV GAS GIG A L ++ + V+A RN A L L
Sbjct: 2 NMAFDFSGKSVLVTGASSGIGRACAVALAQRGAR--VVAAARN---AAALDRLAGETGCE 56
Query: 81 LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSL 138
L+LD+ ++ I A+ + G+ + L+N +GI L+ + T ++
Sbjct: 57 --PLRLDVGDDAAIRAALAA----AGAFDGLVNCAGI----ASLESALDMTAEGFDR--- 103
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-DNRLGGWHSYRA 197
VNA G LV +H++ + G G + N+S++ +G + L +Y A
Sbjct: 104 --VMAVNARGAALVARHVARAMIAAGRG-----GSIVNVSSQAALVGLPDHL----AYCA 152
Query: 198 SKAAL 202
SKAAL
Sbjct: 153 SKAAL 157
|
Length = 245 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-06
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRF-PERLDVLQLD 87
V+ V G + GIG E A++L + V+ N A + ++ +F R L++D
Sbjct: 416 VAFVTGGAGGIGRETARRLA--AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMD 473
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T E ++A+ + YG +++++N +GI + ETTL L ++ A
Sbjct: 474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFE--ETTL-----QEWQLNLDILAT 526
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKI 207
G LV + ++ G G ++ +A+ +A + +Y A+KAA H
Sbjct: 527 GYFLVAREAFRQMREQGLG--GNIVFIASKNAVYAGKNAS------AYSAAKAAEAHLAR 578
Query: 208 CVS 210
C++
Sbjct: 579 CLA 581
|
Length = 676 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-06
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+V GA++GIG A+ LL+ VIA L + + L + LD+
Sbjct: 2 IVTGAAQGIGRAVARHLLQAGAT--VIALDLPFV-------LLLEYGDPLRLTPLDVADA 52
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+ + + ++G ++ L+N +G+L + + + VN G
Sbjct: 53 AAVREVCSRLLAEHGPIDALVNCAGVLRPGA-------TDPLSTEDWEQTFAVNVTGVFN 105
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+++ ++P +K TG + VA+ +A V I +Y ASKAAL
Sbjct: 106 LLQAVAPHMKDRRTG---AIVTVASNAAHVPRI------SMAAYGASKAAL 147
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-06
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPE--RLDV 83
+G + +V G S GIGL K+LL NGA D+ +
Sbjct: 8 QGKIIIVTGGSSGIGLAIVKELLA--------------NGANVVNADIHGGDGQHENYQF 53
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA-- 141
+ D++ + + I EK+G ++ L+N +GI +IP +L E K L
Sbjct: 54 VPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI-NIPRLLVDE----KDPAGKYELNEA 108
Query: 142 -----YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
+ +N G L+ + ++ + +++ V+ N+S+ G G G Y
Sbjct: 109 AFDKMFNINQKGVFLMSQAVARQM------VKQHDGVIVNMSSEAGLEGSE---GQSCYA 159
Query: 197 ASKAALNHDKICVSGVWSKE 216
A+KAALN + W+KE
Sbjct: 160 ATKAALN----SFTRSWAKE 175
|
Length = 266 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-06
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVLQLDL 88
+LV GASRGIG A +L +G + + GA +++ + + + D+
Sbjct: 1 ALVTGASRGIGRAIALKL---AKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDV 57
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGI----LSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ ++A + I+E+ G +++L+N +GI L + E + V ++L + +
Sbjct: 58 SDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLM---RMKEEDWDAVIDTNLTGVFNL 114
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
V++ M I++ + N+S+ VG +G+ G +Y ASKA +
Sbjct: 115 TQA----VLRIM----------IKQRSGRIINISSVVGLMGN---AGQANYAASKAGV-- 155
Query: 205 DKICVSGVWSKEGSSY 220
I + +KE +S
Sbjct: 156 --IGFTKSLAKELASR 169
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 5e-06
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDV 83
+W+G V+LV GAS GIG A+ L++ K V+ R + L ++ L
Sbjct: 3 RWRGRVALVTGASVGIGAAVARALVQHGMK--VVGCARRVDKIEALAAECQSAGYPTLFP 60
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
Q DL+ E I + +I+ ++ +++ IN +G+ P L T
Sbjct: 61 YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLAR-PEPLLSGKT 105
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 5e-06
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 25/177 (14%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNG-ATGLLDLKNRFPERLDVLQLD 87
V+LV GA++ IG A+ L + G V+ A L D N ++Q D
Sbjct: 2 VALVTGAAKRIGRAIAEALAAE---GYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQAD 58
Query: 88 LTVESTIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
L+ + + +G ++L+ NAS P E + + +N
Sbjct: 59 LSDFAACADLVAAAFRAFGRCDVLVNNAS-------AFYPTPLGQGSE-DAWAELFGINL 110
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLS-ARVGSIGDNRLGGWHSYRASKAAL 202
P L+I+ + L G + N+ A D L G+ +Y SKAAL
Sbjct: 111 KAPYLLIQAFARRLAGSRNG------SIINIIDAMT----DRPLTGYFAYCMSKAAL 157
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-06
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 25 KWK--GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPER 80
+W+ G +L+ GAS+GIGL A++ L G V+ R+ + D L FPER
Sbjct: 4 RWRLDGQTALITGASKGIGLAIAREFL---GLGADVLIVARDADALAQARDELAEEFPER 60
Query: 81 -LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
+ L D++ + A +++ + L++L+N +G N+ + + E +
Sbjct: 61 EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGG----NIRKAAIDYTEDEWRGI- 115
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
+E N + ++ PLLK + ++ V+ L+ R G Y +K
Sbjct: 116 --FETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-------HVRSGA--PYGMTK 164
Query: 200 AALN 203
AAL
Sbjct: 165 AALL 168
|
Length = 257 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G +LV G+SRGIG + AK L V+ + A ++ R + D
Sbjct: 6 GKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGAD 64
Query: 88 LTVESTIEASAKSIKEKYGSLNLLI-NASG 116
LT E ++ A + +E++G L+ L+ NASG
Sbjct: 65 LTDEESVAALMDTAREEFGGLDALVLNASG 94
|
Length = 248 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 19/150 (12%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA----TCRNPNGATGLLDLKNRFPERLDV 83
G V+ V GASRGIG A L K V+A + + A L E ++
Sbjct: 3 GKVAFVTGASRGIGRAIA-LRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61
Query: 84 -------LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
+ +D+ E + A ++ +++G L++L+N +G + + V
Sbjct: 62 AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPA-------K 114
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTG 166
L VN G L+ + P + G G
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAGQG 144
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G +LV GA +GIG K L + + V+A R L+ R ++ + +D
Sbjct: 7 GKRALVTGAGKGIGRATVKALAKAGAR--VVAVSRTQADLDSLV----RECPGIEPVCVD 60
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
L+ E + S+ G ++LL+N + + +LQP +V K + +++VN
Sbjct: 61 LSDWDATEEALGSV----GPVDLLVNNAAVA----ILQP---FLEVTKEAFDRSFDVNVR 109
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
I V + ++ + G + N+S++ L Y ++KAAL+
Sbjct: 110 AVIHVSQIVARGMIARGVP-----GSIVNVSSQASQRA---LTNHTVYCSTKAALD 157
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 35 GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVEST 93
I AK E+ + V+ T P G +D L P DV+ LD+T +
Sbjct: 3 ADDNSIAWAIAKAAAEEGAE--VVLTTWPPALRMGAVDELAKELPA--DVIPLDVTSDED 58
Query: 94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVI 153
I+ + +KE G ++ L+++ + +P + + + A +++A I +
Sbjct: 59 IDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTS---REGFLKALDISAYSFISLA 115
Query: 154 KHMSPLLKVGGT 165
K PL+ GG+
Sbjct: 116 KAAKPLMNEGGS 127
|
Length = 239 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G V+L+ GA+ GIG A++ L + + VIA P A + L
Sbjct: 5 QGKVALLTGAASGIGEAVAERYLAEGAR-VVIAD-IKPARARL---AALEIGPAAIAVSL 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T + +I+ + E++G +++L N + + + P + + + S + VN
Sbjct: 60 DVTRQDSIDRIVAAAVERFGGIDILFNNAALFD----MAP---ILDISRDSYDRLFAVNV 112
Query: 147 VGPIL----VIKHM 156
G V +HM
Sbjct: 113 KGLFFLMQAVARHM 126
|
Length = 257 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 30/182 (16%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
+G +L+ GA RGIG + AK+ + V R + + + ++
Sbjct: 6 QGKNALITGAGRGIGRAVAIALAKEGVN------VGLLARTEENLKAVAEEVEAYGVKVV 59
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET-TLNKVEKSSLMLA 141
+ D++ + A+ + +K + GS+++LIN +GI L+ + K+ + +LM
Sbjct: 60 IATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGV 119
Query: 142 YEVN-AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
Y AV P M IER + N+S+ G G +Y ASK
Sbjct: 120 YYATRAVLP-----SM----------IERQSGDIINISSTAGQKGA---AVTSAYSASKF 161
Query: 201 AL 202
+
Sbjct: 162 GV 163
|
Length = 239 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 21/180 (11%)
Query: 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQL 86
V++V GASRGIG A +L +G IA P+ AT ++ R Q
Sbjct: 2 PVAIVTGASRGIGRAIATELAA---RGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQA 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+ S EA E +G L+ L+N +GI +P L + + S +N
Sbjct: 59 DIGELSDHEALLDQAWEDFGRLDCLVNNAGIAV-----RPRGDLLDLTEDSFDRLIAINL 113
Query: 147 VGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
GP V + M G R + V +++A + S NR Y SKA L
Sbjct: 114 RGPFFLTQAVARRMVEQPDR-FDGPHRSIIFVTSINAYLVSP--NR----GEYCISKAGL 166
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
+LV G SRGIG A +L E VI ++ + A + + V++ D++
Sbjct: 1 ALVTGGSRGIGKAIALRLAE-RGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQ 59
Query: 91 ESTIEASAKSIKEKYGSLNLLIN--ASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
+E ++KE++G L++L++ A+G L+++ + N
Sbjct: 60 PQDVEEMFAAVKERFGRLDVLVSNAAAGAFR---------PLSELTPAHWDAKMNTNLKA 110
Query: 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG-GWHSYRASKAAL 202
+ + + L++ G G +VA + S+G R + + +KAAL
Sbjct: 111 LVHCAQQAAKLMRERGGG-----RIVA-----ISSLGSIRALPNYLAVGTAKAAL 155
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQ 85
+ + L+ GA+ IG F K LL +I N L +L N + R+ L+
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAG--ARLILADINAPALEQLKEELTNLYKNRVIALE 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
LD+T + +I+ +S EK+G +++LIN +
Sbjct: 59 LDITSKESIKELIESYLEKFGRIDILINNAYP 90
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-05
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFPE-RLDV 83
+G V++V G S GIGL + LLE G +A C R+ L+ +FP RL
Sbjct: 7 EGRVAVVTGGSSGIGLATVELLLE---AGASVAICGRDEERLASAEARLREKFPGARLLA 63
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
+ D+ E+ + A A +++ ++G +++L+N +G
Sbjct: 64 ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96
|
Length = 265 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-05
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 17 TSSASASVKWK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN 75
+ A+AS K GGV LV G + GIG A+ L + ++ R+P +
Sbjct: 193 PAGAAASAPLKPGGVYLVTGGAGGIGRALARALARRYGAR-LVLLGRSPLPPEEEWKAQT 251
Query: 76 -----RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGIL 118
R+ + D+T + + + ++E+YG+++ +I+A+G+L
Sbjct: 252 LAALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL 299
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 4e-05
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFP---ERLDVLQ 85
V+LV GA+RG+G A +L G V+ R+ +L R +Q
Sbjct: 8 VALVTGAARGLGRAIALRLARA---GADVVVHYRS--DEEAAEELVEAVEALGRRAQAVQ 62
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILS 119
D+T ++ +EA+ + E++G +++L+N +GI
Sbjct: 63 ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFE 96
|
Length = 249 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 5e-05
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 24/179 (13%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVL 84
G V+LV GAS GIG A+ L + IA R L L + + VL
Sbjct: 3 GKVALVTGASSGIGEATARALAAEGAA-VAIAARR----VDRLEALADELEAEGGKALVL 57
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+LD+T E ++A+ + E G L++L+N +GI+ +L P + + + ++ +
Sbjct: 58 ELDVTDEQQVDAAVERTVEALGRLDILVNNAGIM----LLGPVEDADTTDWTRMI---DT 110
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
N +G + P + R+ + N+S+ G + Y A+K +N
Sbjct: 111 NLLGLMYTTHAALPHHLL------RNKGTIVNISSVAGRVAVRNSAV---YNATKFGVN 160
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPER 80
A G ++V G G+GLE + L + VI R P+ L + +
Sbjct: 20 AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAH--VIVPARRPDVAREALAGI-----DG 72
Query: 81 LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
++V+ LDL ++ A A+ + +++LIN +G+++ P
Sbjct: 73 VEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP 113
|
Length = 315 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-05
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 27/180 (15%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V+LV G+SRGIG A +L E +G + R+ A + + ++
Sbjct: 4 GKVALVTGSSRGIGKAIALRLAE---EGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLIN--ASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
++ I+ I E++G L++ +N ASG VL+P ++E+S
Sbjct: 61 ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG------VLRP---AMELEESHWDWTMN 111
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-LGGWHSYRASKAAL 202
+NA + + + L++ G G +++ + S+G R L + + SKAAL
Sbjct: 112 INAKALLFCAQEAAKLMEKVGGG-----KIIS-----LSSLGSIRYLENYTTVGVSKAAL 161
|
Length = 250 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-05
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG V+LV GAS GIG A +L V+ + A +++ + +Q
Sbjct: 2 KGKVALVTGASSGIGKAIAIRLATAGAN-VVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D++ E + A +S +++G+L++L+N +G+
Sbjct: 61 DVSKEEDVVALFQSAIKEFGTLDILVNNAGL 91
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 9e-05
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 15/141 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLD 87
V+++ GA++GIG A++L G I A + + + D
Sbjct: 4 VAIITGAAQGIGRAIAERLAAD---GFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGAD 60
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNA 146
+T + +EA EK+GS ++++N +GI I +L E L KV Y VN
Sbjct: 61 VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKV--------YAVNV 112
Query: 147 VGPILVIKHMS-PLLKVGGTG 166
G + I+ + K+G G
Sbjct: 113 FGVLFGIQAAARQFKKLGHGG 133
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 9e-05
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVL 84
KG L+ GA IG K +LE G VIA + LL+ K ++L ++
Sbjct: 3 KGKTILITGAGGLIGSALVKAILEAG--GIVIAADIDKEALNELLESLGKEFKSKKLSLV 60
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
+LD+T + ++E EKYG ++ +N
Sbjct: 61 ELDITDQESLEEFLSKSAEKYGKIDGAVN 89
|
Length = 256 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 35/177 (19%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQ 85
G +L+ G++RGIG FA+ + + + IA AT +
Sbjct: 2 DGKTALITGSARGIGRAFAQAYVREGAR-VAIADINLEAARATAAEIGPAAC-----AIS 55
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LD+T +++I+ ++ +++GS+++L+N + + + ++ + + S + +N
Sbjct: 56 LDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVD-------ITRESYDRLFAIN 108
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + +++ ++ + G G + N++++ G G+ +G Y A+KAA+
Sbjct: 109 VSGTLFMMQAVARAMIAQGRG-----GKIINMASQAGRRGEALVG---VYCATKAAV 157
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 20/176 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G V + G G+G A L + + V R + L + L + +
Sbjct: 6 QGKVVAITGGFGGLGRATAAWLAARGAR--VALIGRGAAPLSQTLP--GVPADALRIGGI 61
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
DL + + ++G L+ L+N +G T+ + + Y VN
Sbjct: 62 DLVDPQAARRAVDEVNRQFGRLDALVNIAGAF-------VWGTIADGDADTWDRMYGVNV 114
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ K P L G G + N+ A G +Y A+KA +
Sbjct: 115 KTTLNASKAALPALTASGGG------RIVNIGAGAALKAG---PGMGAYAAAKAGV 161
|
Length = 239 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 1e-04
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K V++V G S+GIG +L E+ VI D+K +D ++
Sbjct: 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSN--VIN-----------FDIKEPSYNDVDYFKV 51
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV-LQPETTLNKVEKSSLMLAYEVN 145
D++ + + + KYG +++L+N +GI S + E +++ VN
Sbjct: 52 DVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRI--------INVN 103
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVV 174
G L+ K+ P + G+ ++A V
Sbjct: 104 VNGIFLMSKYTIPYMLKQDKGVIINIASV 132
|
Length = 258 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQL 86
G V+LV AS GIGL A+ L +G +A C RN + +
Sbjct: 1 GKVALVTAASSGIGLAIARALA---REGARVAICARNRENLERAASELRAGGAGVLAVVA 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASG 116
DLT I+ + + +G +++L+N +G
Sbjct: 58 DLTDPEDIDRLVEKAGDAFGRVDILVNNAG 87
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQ 85
G ++V GA+ GIG E A +L G +A N +GA + D N+ + +
Sbjct: 6 NGKTAVVTGAASGIGKEIALELARA---GAAVAIADLNQDGANAVADEINKAGGKAIGVA 62
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+D+T E + A + E++GS+++L++ +GI
Sbjct: 63 MDVTNEDAVNAGIDKVAERFGSVDILVSNAGI 94
|
Length = 262 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G ++LV GASRGIG AK L ++ VI + R +G + D + + L
Sbjct: 7 TGKIALVTGASRGIGEAIAKLLAQQGAH--VIVSSRKLDGCQAVADAIVAAGGKAEALAC 64
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+ I+A I+E++G L++L+ NA+ ++L +T L +K+ +VN
Sbjct: 65 HIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHIL--DTDLGAFQKT-----VDVN 117
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
G + L+K G G +VA V +S
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS 150
|
Length = 252 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +LV GA+ GIGL A+ L G V+ GA + + L
Sbjct: 1 GKTALVTGAASGIGLAIARALAAA---GANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPA 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T E I + ++G L++L+N +GI + + + E ++A V
Sbjct: 58 DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP-----EDWDRIIA--VML 110
Query: 147 VGPILVIKHMSPLLKVGGTG 166
I+ P +K G G
Sbjct: 111 TSAFHTIRAALPHMKKQGWG 130
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 3e-04
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQ 85
G L+ GA+ GIG A + ++ G V CRN A + + +
Sbjct: 1 GRSFLITGANSGIGKAAALAIAKRG--GTVHMVCRNQTRAEEARKEIETESGNQNIFLHI 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+D++ + + KE+ L++LIN +G + V + E T + +EK+ + N
Sbjct: 59 VDMSDPKQVWEFVEEFKEEGKKLHVLINNAGCM----VNKRELTEDGLEKN-----FATN 109
Query: 146 AVGPILVIKHMSPLLK 161
+G ++ H+ P+L+
Sbjct: 110 TLGTYILTTHLIPVLE 125
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G +L+ G + GIGLE A+Q L + + V T R+P L + E V++
Sbjct: 5 QGKTALITGGTSGIGLETARQFLAEGAR--VAITGRDP---ASLEAARAELGESALVIRA 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLL-INASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D + +A A+++ E +G L+ + INA G+ P L +++ ++ N
Sbjct: 60 DAGDVAAQKALAQALAEAFGRLDAVFINA-GVA----KFAP---LEDWDEAMFDRSFNTN 111
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVAN--LSARVGSIGDNRLGGWHSYRASKAALN 203
GP +I+ + PLL ++V N ++A +G + Y ASKAAL
Sbjct: 112 VKGPYFLIQALLPLLA-------NPASIVLNGSINAHIGMPNSS------VYAASKAALL 158
|
Length = 249 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 3e-04
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD--LKNRFPERLDVL 84
G V ++ GA+ GIG E A+ G VI CRN + A+ + L+ R++ +
Sbjct: 1 GKVIIITGANSGIGFETARSFAL---HGAHVILACRNMSRASAAVSRILEEWHKARVEAM 57
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
LDL +++ A++ K K L++L+ + + ++P L + L ++V
Sbjct: 58 TLDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLT---------EDGLETTFQV 108
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186
N +G +++ + +L+ V VV++ S R + D
Sbjct: 109 NHLGHFYLVQLLEDVLRRSAPA---RVIVVSSESHRFTDLPD 147
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 11/158 (6%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQ 85
KG V+LV G++ GIGL A+ L V+ + + + ++
Sbjct: 1 KGKVALVTGSTSGIGLGIARA-LAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHG 59
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
DL+ + IE + ++G +++L+N +GI + + P + + +
Sbjct: 60 ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIA--------L 111
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182
N + P +K G G ++A V L A
Sbjct: 112 NLSAVFHTTRLALPHMKKQGWGRIINIASVHGLVASAN 149
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ G S GIG A+ L ++D V ATCR D+ E L+ QLD
Sbjct: 8 LITGCSSGIGAYCARAL--QSDGWRVFATCRKEE------DVAALEAEGLEAFQLDYAEP 59
Query: 92 STIEASAKSIKEKY-GSLNLLIN 113
+I A + E G L+ L N
Sbjct: 60 ESIAALVAQVLELSGGRLDALFN 82
|
Length = 277 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V L+ GAS GIG A ++ E V RN L+ D
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAG--ATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASG 116
LT + ++ + K I ++G ++ L+N +G
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAG 457
|
Length = 657 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 5e-04
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 19/186 (10%)
Query: 19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP 78
S +++ G +++ GA GIG E A V+ + N + A ++D +
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINADAANHVVDEIQQLG 59
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
+ + D+T E + A A K G +++L+N +G P +
Sbjct: 60 GQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRR------ 113
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
AYE+N + + ++P ++ G G V+ +++ +N+ SY +S
Sbjct: 114 --AYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAA---ENKNINMTSYASS 162
Query: 199 KAALNH 204
KAA +H
Sbjct: 163 KAAASH 168
|
Length = 255 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 24/178 (13%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER-LDVL-- 84
G +LV GA+RG+G FA+ L E V A +L
Sbjct: 7 GKRALVTGAARGLGAAFAEALAE--AGATVAFNDGL---AAEARELAAALEAAGGRAHAI 61
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
DL ++++ + G L+ L+N +GI + T L+ ++M V
Sbjct: 62 AADLADPASVQRFFDAAAAALGGLDGLVNNAGIT----NSKSATELDIDTWDAVM---NV 114
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N G L+++ P L+ G G +V NL++ G +LG +Y ASK A+
Sbjct: 115 NVRGTFLMLRAALPHLRDSGRG-----RIV-NLASDTALWGAPKLG---AYVASKGAV 163
|
Length = 250 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 35/182 (19%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V++V G + IG A+ L+ V + + + ER +
Sbjct: 5 AGKVAIVTGGATLIGAAVARALVAAG--ARVAIVDIDADNGAAVAA---SLGERARFIAT 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINAS------GILSIPNVLQPETTLNKVEKSSLML 140
D+T ++ IE + ++ ++G +++L+N + G+ S ++ +
Sbjct: 60 DITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS--------------SRADWLA 105
Query: 141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
A +VN V ++ + P L GG + N ++ + G W Y ASKA
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLARGG-------GAIVNFTSISAKFA--QTGRW-LYPASKA 155
Query: 201 AL 202
A+
Sbjct: 156 AI 157
|
Length = 261 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 6e-04
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 12/140 (8%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V++V G GIG + LE DK GA D L + D
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE-RGA----DFAEAEGPNLFFVHGD 55
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+ E+ ++ ++ EK G +++L+N + S + L + ++ VN
Sbjct: 56 VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILS--SLLLEEWDRI-----LSVNLT 108
Query: 148 GPILVIKHMSPLLKVGGTGI 167
GP + ++ L I
Sbjct: 109 GPYELSRYCRDELIKNKGRI 128
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 6e-04
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 25/183 (13%)
Query: 23 SVKWKGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP 78
S+ + G V+LV G + GIG L FA++ + V+ R+ G + L
Sbjct: 2 SMTFSGKVALVTGGAAGIGRATALAFAREGAK------VVVADRDAAGGEETVALIREAG 55
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
+ D+T ++ ++A + YG L+ N +GI L + + E ++
Sbjct: 56 GEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGS---EAEFDAI 112
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
M VN G L +K+ PL+ G G + A VA L A Y AS
Sbjct: 113 M---GVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSI---------YAAS 160
Query: 199 KAA 201
K A
Sbjct: 161 KHA 163
|
Length = 253 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 8e-04
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
G V+L+ A++GIG L FA++ VIAT N L R P +
Sbjct: 1 DGKVALITAAAQGIGRAIALAFAREGAN------VIATDINEE----KLKELERGP-GIT 49
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
LD+T + + A AK G +++L N +G + ++L E A
Sbjct: 50 TRVLDVTDKEQVAALAKEE----GRIDVLFNCAGFVHHGSILD-------CEDDDWDFAM 98
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GD-NRLGGWHSYRASKA 200
+N L+IK + P + + R + N+S+ SI G NR Y +KA
Sbjct: 99 NLNVRSMYLMIKAVLPKM------LARKDGSIINMSSVASSIKGVPNRF----VYSTTKA 148
Query: 201 AL 202
A+
Sbjct: 149 AV 150
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 8e-04
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V L+ G S GIG A K V AT R D++ +QLD+
Sbjct: 3 VVLITGCSSGIGRALADAF--KAAGYEVWATARKAE------DVEALAAAGFTAVQLDVN 54
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+ + A+ ++ ++G L++LIN +G ++ +L ++ +E N
Sbjct: 55 DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGV-------EAMRRQFETNVFAV 107
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ V + + PLL+ R +V N+ + G + G +Y ASKAA+
Sbjct: 108 VGVTRALFPLLR-------RSRGLVVNIGSVSGVLVTPFAG---AYCASKAAV 150
|
Length = 274 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQ 85
G V+LV GA++GIG A+ + +A + R+ +
Sbjct: 6 AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+T +++ A+ + +E +G L++L+N +GI
Sbjct: 65 ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI 96
|
Length = 260 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--L 84
KG ++L+ GAS GIG AK + V GL + ++
Sbjct: 9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRE---LGIEAHGY 64
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILS-IPNVLQPETTLNKVEKSSLMLAYE 143
D+T E ++A I+++ G +++L+N +GI+ IP + +V +
Sbjct: 65 VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQV--------ID 116
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
++ P +V K + P + I++ + N+ + + +G + Y A+K L
Sbjct: 117 IDLNAPFIVSKAVIPSM------IKKGHGKIINICSMMSELGRETVSA---YAAAKGGL 166
|
Length = 265 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER---LDV 83
G +LV G SRG+GL+ A+ L E + V+ + R A L +
Sbjct: 11 SGKTALVTGGSRGLGLQIAEALGEAGAR--VVLSARK---AEELEEAAAHLEALGIDALW 65
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
+ D+ E+ IE A+ E++G +++L+N +G
Sbjct: 66 IAADVADEADIERLAEETLERFGHVDILVNNAG 98
|
Length = 259 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 57/216 (26%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ- 85
K V ++ G ++G+G A+ L +K G +A L+DL E+L+
Sbjct: 4 KDKVIVITGGAQGLGRAMAEYLAQK---GAKLA----------LIDLNQ---EKLEEAVA 47
Query: 86 -------------LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET--TL 130
++T E +EA+ I E +G LN LIN +GIL +++ +
Sbjct: 48 ECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVT 107
Query: 131 NKVEKSSLMLAYEVNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLS--ARVGSI 184
+K+ +VN G L M G V+ N+S AR G++
Sbjct: 108 SKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKG---------VIINISSIARAGNM 158
Query: 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSY 220
G +Y ASKA + ++ W+KE + Y
Sbjct: 159 GQT------NYSASKAGV----AAMTVTWAKELARY 184
|
Length = 253 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVLQLD 87
V+LV G RGIGL A+ L G +A + + D
Sbjct: 4 VALVTGGRRGIGLGIARALA---AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPAD 60
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ S EA + + +G ++ L+N +G+
Sbjct: 61 VADLSAHEAMLDAAQAAWGRIDCLVNNAGV 90
|
Length = 256 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V+LV G ++G+G A+ E+ G VI G +L+ + + V Q D
Sbjct: 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFV-QAD 64
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
L+ + E +G L+ L+NA+G+ +L +T+ ++ A VN
Sbjct: 65 LSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL--DTSPELFDR---HFA--VNVR 117
Query: 148 GPIL----VIKHMSPLLKVGGTGIERDVA-VVANLSARVGSIGDNRLGG---WHSYRASK 199
P IK M R + N +GS+ + GG +Y ASK
Sbjct: 118 APFFLMQEAIKLM----------RRRKAEGTIVN----IGSM--SAHGGQPFLAAYCASK 161
Query: 200 AAL 202
AL
Sbjct: 162 GAL 164
|
Length = 260 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.001
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
+++G V +V GA++GIG A++L + V+ R+ L ++ V
Sbjct: 1 RFEGKVVVVTGAAQGIGRGVAERLAGEG--ARVLLVDRSELVHEVLAEILAAGDAAH-VH 57
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
DL + + ++ E++G +++LIN G
Sbjct: 58 TADLETYAGAQGVVRAAVERFGRVDVLINNVG 89
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 29/181 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCV-IATCRNPNGATGLLDLKNRFPERLDVLQ 85
K V +V G + GIG + +L E+ G + + R+ +L+ P R + +Q
Sbjct: 6 KDKVVIVTGGASGIGAAISLRLAEE---GAIPVIFGRSAPDDEFAEELRALQP-RAEFVQ 61
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI---LSIPNVLQPETTLNKVEKSSLMLAY 142
+DLT ++ + + K+G ++ L+N +G+ + + E S
Sbjct: 62 VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGL------EAGREAFVAS-----L 110
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
E N + ++ + P LK I N+S++ G GG Y A+K A
Sbjct: 111 ERNLIHYYVMAHYCLPHLKASRGAI-------VNISSKTALTGQ---GGTSGYAAAKGAQ 160
Query: 203 N 203
Sbjct: 161 L 161
|
Length = 258 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.002
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLL--DLKNRFPERLD 82
G ++ GA+ GIG E A++L + VI CR+ A + D N +
Sbjct: 1 GKTVIITGANTGIGKETARELARRG--ARVIMACRDMAKCEEAAAEIRRDTLNH---EVI 55
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
V LDL +I A A + L++LIN +G++ P
Sbjct: 56 VRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCP 94
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.002
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V+LV GA+RGIGL A L+ + + V+A G+ + E + +D
Sbjct: 10 GRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSK----VAKALGENAWFIAMD 64
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+ E+ + A + ++G L+ L+ + I N TTL + + VN
Sbjct: 65 VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHN-----TTLESLSLAHWNRVLAVNLT 119
Query: 148 GPILVIKHMSPLLKVGGTGI 167
GP+L+ KH +P L+ I
Sbjct: 120 GPMLLAKHCAPYLRAHNGAI 139
|
Length = 255 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.002
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
K G +L+ GA +GIG A+ ++ +P +L R V
Sbjct: 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLD--ISPEIEKLADELCGRGHRCTAV- 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ 125
D+ +++ A+ K KEK G +++L+N +G+ + + L
Sbjct: 60 VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLD 100
|
Length = 263 |
| >gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.002
Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
G ++ GAS G+GL AK L + + V+ CR+ A + VL DL
Sbjct: 2 GTVVITGASSGLGLAAAKALARR-GEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDL 60
Query: 89 TVESTIEASAKSIKEKYGSLN-LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
++ + + L+ L+ NA+ + +P +P T + E L VN +
Sbjct: 61 ASLDSVRQFVDNFRRTGRPLDALVCNAA--VYLPTAKEPRFTADGFE-----LTVGVNHL 113
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSAR---VGSI-GD-NRLGGWHSYRASKAAL 202
G L+ + D+ N S R VGSI + N L G RA+ L
Sbjct: 114 GHFLLT-----------NLLLEDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDL 162
|
Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LV GAS GIG A++L + V R + L L L LD+T
Sbjct: 5 VALVTGASSGIGKATARRLAAQGYT--VYGAARRVDKMEDLASLGVH------PLSLDVT 56
Query: 90 VESTIEASAKSIKEKYGSLNLLINASG 116
E++I+A+ +I + G +++L+N +G
Sbjct: 57 DEASIKAAVDTIIAEEGRIDVLVNNAG 83
|
Length = 273 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 26/179 (14%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGL-LDLKNRFPERLDVLQ 85
G V ++ GAS GIG A +L G + RN L +L + E L V+
Sbjct: 1 GKVVIITGASEGIGRALAVRLARA---GAQLVLAARNETRLASLAQELADHGGEAL-VVP 56
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT-LNKVEKSSLMLAYEV 144
D++ E ++ ++G +++L+N +GI E T L+ E+ +M V
Sbjct: 57 TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRF--DELTDLSVFER--VM---RV 109
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-DNRLGGWHSYRASKAAL 202
N +G + P LK +V +S+ G G R G Y ASK AL
Sbjct: 110 NYLGAVYCTHAALPHLK------ASRGQIVV-VSSLAGLTGVPTRSG----YAASKHAL 157
|
Length = 263 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.003
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V+ V GA GIG A L + D R +G + R +
Sbjct: 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALF--DLRTDDGLAETAEHIEAAGRRAIQIAA 65
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T ++ + A+ + + G+L L +NA+GI + P + + + ++M ++N
Sbjct: 66 DVTSKADLRAAVARTEAELGALTLAVNAAGIANA----NPAEEMEEEQWQTVM---DINL 118
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G L + + + G G ++V N+++ G I + L H Y ASKA + H
Sbjct: 119 TGVFLSCQAEARAMLENGGG-----SIV-NIASMSGIIVNRGLLQAH-YNASKAGVIH 169
|
Length = 254 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.003
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 22/177 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V LV GASRG+G A+ + + V+ R+ A + ER +Q D+
Sbjct: 2 VVLVTGASRGLGAAIARSFAREGAR-VVVNYYRSTESAEAVAAEAG---ERAIAIQADVR 57
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
++A + K +G ++ ++N + I + Q + T + ++ E G
Sbjct: 58 DRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRK-TFDTIDWEDYQQQLEGAVKGA 116
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG----WHSYRASKAAL 202
+ +++ + P K G+G RV +IG N +H Y +KAAL
Sbjct: 117 LNLLQAVLPDFKERGSG-------------RVINIGTNLFQNPVVPYHDYTTAKAAL 160
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.003
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GASRGIG A L I R+ A D R V+ D+ E
Sbjct: 6 LITGASRGIGRATAV-LAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE 64
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+ + A +++ +G L+ L+N +GI++ P L ++ + L ++ N +G L
Sbjct: 65 ADVIAMFDAVQSAFGRLDALVNNAGIVA------PSMPLADMDAARLRRMFDTNVLGAYL 118
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+ + L G + V+++++R+GS + + Y SK A++
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE-----YVDYAGSKGAVD 165
|
Length = 248 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.4 bits (86), Expect = 0.003
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--- 83
KG V+LV GASRGIG AK+L + R + ++++ +
Sbjct: 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 62
Query: 84 LQLDLTVESTIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
L+ VE+ + ++ + GS ++LIN +GI P ETT ++
Sbjct: 63 LESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQFFDR-----M 115
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
VNA P +I+ L RD + + N+S+ I L + +Y +K A
Sbjct: 116 VSVNAKAPFFIIQQALSRL--------RDNSRIINISSAATRIS---LPDFIAYSMTKGA 164
Query: 202 LN 203
+N
Sbjct: 165 IN 166
|
Length = 252 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 231 | |||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.98 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.98 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.98 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.98 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.98 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.98 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.98 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.98 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.98 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.97 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.97 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.97 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.97 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.97 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.97 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.97 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.97 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.97 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.97 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.97 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.97 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.97 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.97 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.97 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.97 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.97 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.97 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.97 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.97 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.97 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.97 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.97 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.97 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.97 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.97 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.96 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.96 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.96 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.96 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.96 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.96 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.95 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.95 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.95 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.95 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.95 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.94 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.94 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.94 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.93 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.93 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.92 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.92 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.92 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.9 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.9 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.88 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.86 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.86 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.85 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.84 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.79 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.79 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.77 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.75 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.74 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.74 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.74 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.73 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.72 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.72 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.72 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.71 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.71 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.7 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.7 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.69 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.68 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.67 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.67 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.67 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.63 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.62 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.61 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.61 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.6 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.58 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.57 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.57 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.57 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.56 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.51 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.51 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.49 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.48 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.48 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.47 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.45 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.44 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.43 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.43 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.41 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.4 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.38 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.38 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.33 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.33 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.31 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.3 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.27 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.27 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.26 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.26 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.21 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.21 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.21 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.15 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.13 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.12 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.1 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.06 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.01 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.96 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 98.95 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.94 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.87 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.85 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.79 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.77 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.74 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 98.71 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.7 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.64 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.54 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.53 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.5 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.48 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.45 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.44 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.43 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.41 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.37 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.26 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.18 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.15 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.14 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.12 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.01 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.01 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.0 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.97 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.96 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.93 | |
| PLN00106 | 323 | malate dehydrogenase | 97.76 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.72 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.67 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.53 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.5 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.47 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.45 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.44 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.43 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.4 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.37 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.36 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.2 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.18 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.09 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.07 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.05 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.04 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.02 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.0 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 96.99 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.98 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.96 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.93 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.92 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.91 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.89 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.87 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.83 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.82 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.78 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.76 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.76 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.76 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.68 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.66 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.64 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.63 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.62 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.6 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.55 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.52 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.48 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.45 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.45 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.44 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 96.43 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.41 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.41 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.4 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.39 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.38 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.34 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.34 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.32 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.29 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.27 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.23 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.21 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.21 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.21 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.2 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.18 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.18 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.17 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.16 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.09 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.08 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.06 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.06 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.01 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.99 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.99 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.98 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.98 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.89 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.86 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 95.85 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.85 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 95.85 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 95.76 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.75 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.71 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.71 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.7 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.65 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 95.64 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 95.64 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.62 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 95.59 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.57 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.57 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.56 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.5 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.5 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.44 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.41 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.32 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 95.3 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 95.28 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.25 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.23 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.18 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 95.16 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.14 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 95.13 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.13 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.13 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.12 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.08 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.06 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.05 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.02 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 94.99 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 94.96 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 94.95 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 94.93 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 94.91 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 94.9 | |
| PTZ00245 | 287 | ubiquitin activating enzyme; Provisional | 94.88 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 94.88 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 94.82 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 94.81 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 94.8 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 94.8 | |
| PRK07411 | 390 | hypothetical protein; Validated | 94.79 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 94.78 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 94.76 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.74 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 94.72 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 94.71 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 94.71 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 94.68 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 94.65 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 94.65 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 94.64 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 94.62 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.6 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 94.59 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 94.56 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.56 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 94.55 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 94.51 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 94.5 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 94.49 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 94.47 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 94.44 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 94.42 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 94.36 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 94.3 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 94.24 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 94.23 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 94.22 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.21 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 94.2 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 94.16 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 94.13 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 94.11 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 94.1 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 94.09 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 93.96 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 93.94 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 93.94 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 93.92 | |
| PLN02928 | 347 | oxidoreductase family protein | 93.87 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 93.87 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 93.83 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 93.78 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 93.77 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 93.75 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 93.75 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 93.72 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 93.67 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 93.65 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 93.57 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 93.57 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 93.52 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 93.51 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 93.49 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 93.43 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 93.39 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 93.35 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.35 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 93.33 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 93.33 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 93.32 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 93.32 |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=261.28 Aligned_cols=185 Identities=24% Similarity=0.325 Sum_probs=173.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|+++|||||+|||.++|+.|++.|++ |+++.|+.+.++++.+.+.+ ..+.....|++|+++++++++.+.++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~--vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAK--VVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCe--EEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 357899999999999999999999999997 99999999998888776654 68999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
|+++|+||||||.. +..++.+.+.++|++++++|+.|.++..++.+|.|.+++.| .|||+||++|..
T Consensus 79 ~g~iDiLvNNAGl~-------~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G------~IiN~~SiAG~~ 145 (246)
T COG4221 79 FGRIDILVNNAGLA-------LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSG------HIINLGSIAGRY 145 (246)
T ss_pred hCcccEEEecCCCC-------cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCc------eEEEeccccccc
Confidence 99999999999998 45889999999999999999999999999999999999987 999999999888
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
. .|+...|+++|+++.+|.+.++.|+..++|||. +|+||.|.
T Consensus 146 ~---y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt-~I~PG~v~ 187 (246)
T COG4221 146 P---YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVT-VISPGLVE 187 (246)
T ss_pred c---CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEE-EecCceec
Confidence 7 799999999999999999999999999999966 99999984
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=267.08 Aligned_cols=190 Identities=22% Similarity=0.265 Sum_probs=170.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCC-ceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPE-RLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~-~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++.||+++|||||+|||.++|..|+++|++ ++++.|....++.+.+++. .... +++.++||++|++++.++++++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~--l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAK--LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCc--eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 4788999999999999999999999999997 8888898888888744443 3333 4999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
..+||++|+||||||+. .....++.+.+++++.|++|++|+..++|+++|+|++++.| +||+++|+.
T Consensus 86 ~~~fg~vDvLVNNAG~~-------~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G------hIVvisSia 152 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGIS-------LVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG------HIVVISSIA 152 (282)
T ss_pred HHhcCCCCEEEecCccc-------cccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC------eEEEEeccc
Confidence 99999999999999998 36677888999999999999999999999999999998866 999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+ .|....|++||+|+.+|.++|+.|+.+.++.+..+|+||.|++
T Consensus 153 G~~~---~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~T 199 (282)
T KOG1205|consen 153 GKMP---LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIET 199 (282)
T ss_pred cccC---CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceee
Confidence 9988 6777799999999999999999999998865222899999985
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=261.87 Aligned_cols=188 Identities=22% Similarity=0.275 Sum_probs=175.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++++||||||+|||.++|++|+++|++ |+++.|++++++.+.++++ ..+.++..+++|+++++++.++.+++++
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~--liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYN--LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence 347899999999999999999999999997 9999999999999876654 4567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+.++||++|||||+.. .+++.+.+.++.++++++|+.++..++++++|.|.+++.| .|||++|..|.
T Consensus 81 ~~~~IdvLVNNAG~g~-------~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G------~IiNI~S~ag~ 147 (265)
T COG0300 81 RGGPIDVLVNNAGFGT-------FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAG------HIINIGSAAGL 147 (265)
T ss_pred cCCcccEEEECCCcCC-------ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEEEEechhhc
Confidence 9899999999999984 7789999999999999999999999999999999999887 99999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .|....|+++|+++.+|+++|+.|+.+.||+|. +++||.+++
T Consensus 148 ~p---~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~-~v~PG~~~T 191 (265)
T COG0300 148 IP---TPYMAVYSATKAFVLSFSEALREELKGTGVKVT-AVCPGPTRT 191 (265)
T ss_pred CC---CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEecCcccc
Confidence 87 788899999999999999999999999999966 999999875
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=251.05 Aligned_cols=190 Identities=19% Similarity=0.276 Sum_probs=174.6
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++.+.+|+++|||||++|||+++|.+|+++|++ +++.|.+.+..++..+..++.| ++..+.||+++.+++.+..+++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~--~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAK--LVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCe--EEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHH
Confidence 445789999999999999999999999999996 9999999988888776666554 8999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+++.|++|++|||||+. +..++.+.+.+++++++++|+.|++..+|+|+|.|.+..+| +||+++|.+
T Consensus 109 k~e~G~V~ILVNNAGI~-------~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G------HIV~IaS~a 175 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIV-------TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG------HIVTIASVA 175 (300)
T ss_pred HHhcCCceEEEeccccc-------cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc------eEEEehhhh
Confidence 99999999999999998 57888999999999999999999999999999999998887 999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhcc---ccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWS---KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~---~~gi~~~~~v~pg~~~~ 231 (231)
|..+ .++..+|++||+|+.+|.+++..|+. ++||++. .|+|+++++
T Consensus 176 G~~g---~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktT-lv~P~~i~T 224 (300)
T KOG1201|consen 176 GLFG---PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTT-LVCPYFINT 224 (300)
T ss_pred cccC---CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEE-EEeeeeccc
Confidence 9998 78899999999999999999999975 4578855 999999874
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=254.94 Aligned_cols=188 Identities=13% Similarity=0.162 Sum_probs=165.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+.. .+.++.++.+|++|+++++++++++.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGAD--VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 88889987766665444332 35578999999999999999999986
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+
T Consensus 82 -~~g~iD~lv~nag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g------~Ii~isS~~~ 147 (263)
T PRK08339 82 -NIGEPDIFFFSTGGPK-------PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG------RIIYSTSVAI 147 (263)
T ss_pred -hhCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEcCccc
Confidence 5899999999999753 4567788999999999999999999999999999887665 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 148 ~~~---~~~~~~y~asKaal~~l~~~la~el~~~gIr-Vn~v~PG~v~T 192 (263)
T PRK08339 148 KEP---IPNIALSNVVRISMAGLVRTLAKELGPKGIT-VNGIMPGIIRT 192 (263)
T ss_pred cCC---CCcchhhHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeCcCcc
Confidence 655 6788899999999999999999999999999 77999999975
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=256.18 Aligned_cols=189 Identities=19% Similarity=0.255 Sum_probs=158.9
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++|++|||||+ +|||+++|++|++.|++ |++.+|++...+.+.+..+..+.. .++++|++|+++++++++++.
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~--Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAE--LAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 4679999999997 79999999999999997 888888853222333333333334 678999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|++|||||+..+.. ...++.+.+.++|++++++|+.++++++++++|.|.++ | +||++||..+
T Consensus 79 ~~~g~iDilVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g------~Iv~isS~~~ 147 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEA---LEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--A------SVLTLSYLGG 147 (274)
T ss_pred HHcCCCCEEEECCccCcccc---cccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--C------cEEEEecCCC
Confidence 99999999999999752100 12567788999999999999999999999999999753 3 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+.+|+++++.|++++||+ +|+|+||.|++
T Consensus 148 ~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-Vn~v~PG~v~T 192 (274)
T PRK08415 148 VKY---VPHYNVMGVAKAALESSVRYLAVDLGKKGIR-VNAISAGPIKT 192 (274)
T ss_pred ccC---CCcchhhhhHHHHHHHHHHHHHHHhhhcCeE-EEEEecCcccc
Confidence 655 6788899999999999999999999999999 77999999975
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=254.42 Aligned_cols=189 Identities=16% Similarity=0.226 Sum_probs=159.1
Q ss_pred cccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++|++|||||++ |||+++|++|+++|++ |++.+|++...+.+.+..+..+. ..++++|++|+++++++++++.
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAE--LAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE--EEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHH
Confidence 46899999999996 9999999999999997 88888875433333333333232 3578999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|++|||||.....+ ...++.+.+.++|++.+++|+.+++.++|+++|+|.++ | +||+++|..+
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~--G------~Iv~isS~~~ 149 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNE---LKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG--G------SMLTLTYGGS 149 (271)
T ss_pred HHhCCCCEEEECCccCCCcc---ccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC--c------eEEEEcCCCc
Confidence 99999999999999753100 02467788999999999999999999999999999742 3 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .|++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 150 ~~~---~~~~~~Y~asKaAl~~l~r~la~el~~~gIr-Vn~v~PG~i~T 194 (271)
T PRK06505 150 TRV---MPNYNVMGVAKAALEASVRYLAADYGPQGIR-VNAISAGPVRT 194 (271)
T ss_pred ccc---CCccchhhhhHHHHHHHHHHHHHHHhhcCeE-EEEEecCCccc
Confidence 665 6888899999999999999999999999999 77999999974
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=250.06 Aligned_cols=194 Identities=17% Similarity=0.221 Sum_probs=161.5
Q ss_pred ccccccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHH
Q 026924 20 ASASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 20 ~~~~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~ 97 (231)
+.+.++++||++|||||+ +|||+++|++|++.|++ |++++|+....+.+.+..++. ..+.+++||++|+++++++
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~--v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~ 78 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAE--LAVTYLNDKARPYVEPLAEEL-DAPIFLPLDVREPGQLEAV 78 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE--EEEEeCChhhHHHHHHHHHhh-ccceEEecCcCCHHHHHHH
Confidence 344567899999999998 59999999999999997 888888764433333332222 2356889999999999999
Q ss_pred HHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
++++.+++|++|++|||||...+.+ ...++.+.+.++|++.+++|+.+++++++.++|+|+++ | +|+++
T Consensus 79 ~~~~~~~~g~ld~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--g------~Ii~i 147 (258)
T PRK07533 79 FARIAEEWGRLDFLLHSIAFAPKED---LHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG--G------SLLTM 147 (258)
T ss_pred HHHHHHHcCCCCEEEEcCccCCccc---ccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC--C------EEEEE
Confidence 9999999999999999999753100 12467788999999999999999999999999999642 3 99999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+|..+..+ .+++..|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 148 ss~~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gI~-Vn~v~PG~v~T 197 (258)
T PRK07533 148 SYYGAEKV---VENYNLMGPVKAALESSVRYLAAELGPKGIR-VHAISPGPLKT 197 (258)
T ss_pred eccccccC---CccchhhHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCCcCC
Confidence 99877655 6788899999999999999999999999999 67999999975
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=249.45 Aligned_cols=188 Identities=16% Similarity=0.224 Sum_probs=163.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||+++|++|+++|++ |++.+|+.. +.+.+..+..+.++.++.+|++++++++++++++.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~--vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGAD--IVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999997 777777532 333333444466889999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ ++||+++|..+.
T Consensus 80 ~~g~iD~lv~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~ 147 (251)
T PRK12481 80 VMGHIDILINNAGIIR-------RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG-----GKIINIASMLSF 147 (251)
T ss_pred HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC-----CEEEEeCChhhc
Confidence 9999999999999763 4567788899999999999999999999999999765432 499999999877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 148 ~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gir-vn~v~PG~v~t 191 (251)
T PRK12481 148 QG---GIRVPSYTASKSAVMGLTRALATELSQYNIN-VNAIAPGYMAT 191 (251)
T ss_pred CC---CCCCcchHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCCCcc
Confidence 66 5777899999999999999999999999999 77999999974
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=249.43 Aligned_cols=189 Identities=20% Similarity=0.251 Sum_probs=159.8
Q ss_pred cccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 23 ~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+..++||++|||||+ +|||+++|++|++.|++ |++.+|++. .+...+.. .+.++.++++|+++++++++++++
T Consensus 2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~--Vi~~~r~~~-~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~ 76 (252)
T PRK06079 2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGAT--VIYTYQNDR-MKKSLQKL--VDEEDLLVECDVASDESIERAFAT 76 (252)
T ss_pred ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCE--EEEecCchH-HHHHHHhh--ccCceeEEeCCCCCHHHHHHHHHH
Confidence 456789999999999 89999999999999997 888888732 22221211 134688999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|++|||||...+.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.++ | +||+++|.
T Consensus 77 ~~~~~g~iD~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~--g------~Iv~iss~ 145 (252)
T PRK06079 77 IKERVGKIDGIVHAIAYAKKEE---LGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG--A------SIVTLTYF 145 (252)
T ss_pred HHHHhCCCCEEEEccccccccc---ccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC--c------eEEEEecc
Confidence 9999999999999999763110 12567788999999999999999999999999999642 3 99999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 146 ~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gI~-vn~i~PG~v~T 192 (252)
T PRK06079 146 GSERA---IPNYNVMGIAKAALESSVRYLARDLGKKGIR-VNAISAGAVKT 192 (252)
T ss_pred Ccccc---CCcchhhHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCcccc
Confidence 87655 6788899999999999999999999999999 77999999975
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=247.79 Aligned_cols=191 Identities=18% Similarity=0.259 Sum_probs=160.7
Q ss_pred ccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++++||++|||||+ +|||+++|++|+++|++ |++.+|+....+.+.+..+.. +.++.++++|++|++++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAK--LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 45789999999997 89999999999999997 888877643333333333322 45788999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|++|||||+..... ...++.+.+.++|++.+++|+.+++.++++++|+|.+. | +||+++|.
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g------~Iv~isS~ 149 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKED---LRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG--G------SIVTLTYL 149 (257)
T ss_pred HHHhCCCccEEEECcccCCCCc---CCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC--c------eEEEEccc
Confidence 9999999999999999753100 12456778889999999999999999999999999652 3 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 150 ~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-vn~v~PG~v~T 196 (257)
T PRK08594 150 GGERV---VQNYNVMGVAKASLEASVKYLANDLGKDGIR-VNAISAGPIRT 196 (257)
T ss_pred CCccC---CCCCchhHHHHHHHHHHHHHHHHHhhhcCCE-EeeeecCcccC
Confidence 88766 6788899999999999999999999999999 77999999875
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=248.34 Aligned_cols=191 Identities=24% Similarity=0.286 Sum_probs=164.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC---CCceeEEEecCCChHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
..+++||++||||+++|||+++|++|++.|++ |++++|+++..+.....+... +.++..+.||++++++++++++
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~--v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~ 80 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAK--VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE 80 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence 35789999999999999999999999999997 999999998877755443332 3469999999999999999999
Q ss_pred HHHHH-cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhH-HHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 100 SIKEK-YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG-PILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 100 ~~~~~-~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
+..++ +|+||++|||||... ...+..+.+.++|++.+++|+.| .+.+.+.+.+++.+++.| .|+++
T Consensus 81 ~~~~~~~GkidiLvnnag~~~------~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg------~I~~~ 148 (270)
T KOG0725|consen 81 FAVEKFFGKIDILVNNAGALG------LTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGG------SIVNI 148 (270)
T ss_pred HHHHHhCCCCCEEEEcCCcCC------CCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCc------eEEEE
Confidence 99998 799999999999875 34478999999999999999995 566666666666665655 99999
Q ss_pred ccCccccCCCCCCCc-cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGW-HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+... .++. ..|+++|+|+++|+|+++.|++++||| +|+|+||.|.+
T Consensus 149 ss~~~~~~---~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIR-vN~v~PG~i~T 199 (270)
T KOG0725|consen 149 SSVAGVGP---GPGSGVAYGVSKAALLQLTRSLAKELAKHGIR-VNSVSPGLVKT 199 (270)
T ss_pred eccccccC---CCCCcccchhHHHHHHHHHHHHHHHHhhcCcE-EEEeecCcEeC
Confidence 99888766 3333 789999999999999999999999999 88999998864
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=251.27 Aligned_cols=196 Identities=18% Similarity=0.189 Sum_probs=161.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC----------CccchhhhhhcCCCceeEEEecCCChHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----------GATGLLDLKNRFPERLDVLQLDLTVEST 93 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~----------~~~~~~~~~~~~~~~v~~~~~Dls~~~~ 93 (231)
.++++|++|||||++|||+++|++|++.|++ |++++|+.. ..+.+.+.++..+.++.++++|++++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGAT--VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 3578999999999999999999999999997 888888743 2233344444456678899999999999
Q ss_pred HHHHHHHHHHHcCCccEEEEcc-ccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCce
Q 026924 94 IEASAKSIKEKYGSLNLLINAS-GILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA 172 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~ 172 (231)
++++++++.+++|++|++|||+ |..... ....++.+.+.++|++++++|+.+++.++++++|.|.+++.|
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g------ 152 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLF---EWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG------ 152 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCccccccc---ccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc------
Confidence 9999999999999999999999 742100 012456778889999999999999999999999999876544
Q ss_pred EEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 173 VVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 173 ~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||+++|..+.....+.++...|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 153 ~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIr-Vn~v~PG~v~T 210 (305)
T PRK08303 153 LVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGAT-AVALTPGWLRS 210 (305)
T ss_pred EEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcE-EEEecCCcccc
Confidence 99999997654332223456789999999999999999999999999 77999999975
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=246.63 Aligned_cols=188 Identities=19% Similarity=0.231 Sum_probs=166.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc--CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+.. .+.++.++++|+++++++.++++++.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAA--VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 568999999999999999999999999997 88889987776665555443 35678899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||||... .....+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||..+
T Consensus 82 ~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~ 148 (260)
T PRK07063 82 EAFGPLDVLVNNAGINV-------FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRG------SIVNIASTHA 148 (260)
T ss_pred HHhCCCcEEEECCCcCC-------CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCe------EEEEECChhh
Confidence 99999999999999753 3445677889999999999999999999999999876654 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 149 ~~~---~~~~~~Y~~sKaa~~~~~~~la~el~~~gIr-vn~v~PG~v~t 193 (260)
T PRK07063 149 FKI---IPGCFPYPVAKHGLLGLTRALGIEYAARNVR-VNAIAPGYIET 193 (260)
T ss_pred ccC---CCCchHHHHHHHHHHHHHHHHHHHhCccCeE-EEEEeeCCccC
Confidence 766 6778899999999999999999999999999 77999999974
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=245.06 Aligned_cols=190 Identities=22% Similarity=0.262 Sum_probs=167.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++.+|+++..+.+.+.+...+.++.++++|++++++++++++++.++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAK--VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 568999999999999999999999999997 888899887777666555555678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||||... +..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||..+..
T Consensus 81 ~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~------~iv~~sS~~~~~ 148 (254)
T PRK07478 81 FGGLDIAFNNAGTLG------EMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG------SLIFTSTFVGHT 148 (254)
T ss_pred cCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEechHhhc
Confidence 999999999999753 33567788899999999999999999999999999887654 999999987652
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. +.+++..|++||+|++.++++++.|++++||+ +|+|+||.+++
T Consensus 149 ~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 192 (254)
T PRK07478 149 A--GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIR-VNALLPGGTDT 192 (254)
T ss_pred c--CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEE-EEEEeeCcccC
Confidence 1 15778899999999999999999999999999 67999999975
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=240.35 Aligned_cols=186 Identities=10% Similarity=0.077 Sum_probs=163.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||+++||||++|||++++++|+++|++ |++.+|+++..+++.+.+...+.++..+++|++++++++++++++.++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~--V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGAT--LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888899988777766655555677889999999999999999999999
Q ss_pred cC-CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCcc
Q 026924 105 YG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~ 182 (231)
++ ++|++|||+|... ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .| .||++||..+
T Consensus 80 ~g~~iD~li~nag~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g------~Iv~isS~~~ 147 (227)
T PRK08862 80 FNRAPDVLVNNWTSSP------LPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKG------VIVNVISHDD 147 (227)
T ss_pred hCCCCCEEEECCccCC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc------eEEEEecCCC
Confidence 98 9999999998643 345677888899999999999999999999999998654 34 9999998653
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 148 ------~~~~~~Y~asKaal~~~~~~la~el~~~~Ir-vn~v~PG~i~t 189 (227)
T PRK08862 148 ------HQDLTGVESSNALVSGFTHSWAKELTPFNIR-VGGVVPSIFSA 189 (227)
T ss_pred ------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCcCcC
Confidence 3556789999999999999999999999999 77999999974
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=245.36 Aligned_cols=190 Identities=18% Similarity=0.225 Sum_probs=158.4
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++++|++|||||+ +|||+++|++|++.|++ |++.+++.+ ..+...+.+...+.++.++++|++|++++++++++
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAE--LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCE--EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence 4689999999986 89999999999999997 777666543 22222223332234577899999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|++|||||...... ...++.+.+.++|++.+++|+.+++.++++++|.|.+. | +||+++|.
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g------~Iv~isS~ 149 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEE---LIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--G------SIVTLTYL 149 (258)
T ss_pred HHHHcCCCCEEEEcccccCccc---ccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--C------eEEEEecc
Confidence 9999999999999999752000 12467788999999999999999999999999999753 3 99999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 150 ~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gI~-Vn~i~PG~v~T 196 (258)
T PRK07370 150 GGVRA---IPNYNVMGVAKAALEASVRYLAAELGPKNIR-VNAISAGPIRT 196 (258)
T ss_pred ccccC---CcccchhhHHHHHHHHHHHHHHHHhCcCCeE-EEEEecCcccC
Confidence 87655 6888899999999999999999999999999 77999999875
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=248.27 Aligned_cols=191 Identities=19% Similarity=0.250 Sum_probs=162.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC---------CCccchhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
+++|++|||||++|||+++|++|++.|++ |++++++. +..+.+.+.+...+.++.++++|+++++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~--vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR--VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 67999999999999999999999999997 77777765 33444444444446688899999999999999
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++++.+++|++|++|||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|.++........++||+
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~ 154 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILR-------DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIIN 154 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEE
Confidence 99999999999999999999863 45678889999999999999999999999999997542110111259999
Q ss_pred eccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 177 LSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 177 iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+||..+..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+|| ++
T Consensus 155 isS~~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-Vn~v~Pg-~~ 203 (286)
T PRK07791 155 TSSGAGLQG---SVGQGNYSAAKAGIAALTLVAAAELGRYGVT-VNAIAPA-AR 203 (286)
T ss_pred eCchhhCcC---CCCchhhHHHHHHHHHHHHHHHHHHHHhCeE-EEEECCC-CC
Confidence 999988776 6888999999999999999999999999999 7799999 54
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=245.23 Aligned_cols=189 Identities=14% Similarity=0.172 Sum_probs=156.7
Q ss_pred cccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++||++|||||++ |||+++|++|+++|++ |++.+|+....+.+.++.+..+. ..++++|++|+++++++++++.
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~--v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAE--LWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCE--EEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHH
Confidence 46799999999997 9999999999999997 87778874222223333333233 3467999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|++|||+|...+.. ...++.+.+.++|++.+++|+.+++.+++++.|+|.+. | +||+++|..+
T Consensus 82 ~~~g~iDilVnnag~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~--G------~Iv~isS~~~ 150 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNE---LKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG--G------SIVTLTYYGA 150 (260)
T ss_pred HHcCCccEEEEccccCCccc---ccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC--c------eEEEEecCcc
Confidence 99999999999999752100 02456788999999999999999999999999999642 3 9999999877
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 151 ~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-Vn~v~PG~v~T 195 (260)
T PRK06603 151 EKV---IPNYNVMGVAKAALEASVKYLANDMGENNIR-VNAISAGPIKT 195 (260)
T ss_pred ccC---CCcccchhhHHHHHHHHHHHHHHHhhhcCeE-EEEEecCcCcc
Confidence 655 6788899999999999999999999999999 77999999975
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=246.29 Aligned_cols=187 Identities=21% Similarity=0.293 Sum_probs=164.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+ +..+.+.+.+...+.++.++++|++++++++++++++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~--vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAY--VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999997 8888998 5555555554444668999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||... ...++.+.+.+.|++++++|+.+++.+++.++|.|.+++ | +||++||..+..
T Consensus 80 ~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~ 146 (272)
T PRK08589 80 FGRVDVLFNNAGVDN------AAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-G------SIINTSSFSGQA 146 (272)
T ss_pred cCCcCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEeCchhhcC
Confidence 999999999999763 234567788899999999999999999999999998654 4 999999988776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 147 ~---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-v~~v~PG~v~T 189 (272)
T PRK08589 147 A---DLYRSGYNAAKGAVINFTKSIAIEYGRDGIR-ANAIAPGTIET 189 (272)
T ss_pred C---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCcccC
Confidence 5 5677899999999999999999999999999 77999999874
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=244.19 Aligned_cols=189 Identities=15% Similarity=0.196 Sum_probs=155.2
Q ss_pred ccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++||++|||||++ |||+++|++|++.|++ |++.+|+. ..+...+........+.+++||++|+++++++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~--vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE--EEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 6799999999986 9999999999999997 88888873 22232222222234567899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|++|||||+.... ......+.+.+.++|++.+++|+.+++.+.+++.|++.++ | +||++||..+.
T Consensus 81 ~~g~iD~linnAg~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g------~Iv~iss~~~~ 150 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGD--QLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--S------ALLTLSYLGAE 150 (262)
T ss_pred hcCCCCEEEECCccCCcc--ccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--c------EEEEEecCCCC
Confidence 999999999999975310 0011225678889999999999999999999999876432 3 89999998776
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 151 ~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-Vn~i~PG~v~T 194 (262)
T PRK07984 151 RA---IPNYNVMGLAKASLEANVRYMANAMGPEGVR-VNAISAGPIRT 194 (262)
T ss_pred CC---CCCcchhHHHHHHHHHHHHHHHHHhcccCcE-EeeeecCcccc
Confidence 54 6888899999999999999999999999999 77999999975
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=243.66 Aligned_cols=190 Identities=19% Similarity=0.241 Sum_probs=165.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.++..+.++.++.+|++++++++++++++.+.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQ--VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888999887777666655555668889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+ ++|++++|..+..
T Consensus 84 ~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----g~iv~~sS~~~~~ 151 (253)
T PRK05867 84 LGGIDIAVCNAGIIT-------VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQG-----GVIINTASMSGHI 151 (253)
T ss_pred hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC-----cEEEEECcHHhcC
Confidence 999999999999763 4567788899999999999999999999999999776432 3899999987654
Q ss_pred CCCCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.. .+ .+..|+++|+|+++++++++.|++++||+ +|+|+||.+++
T Consensus 152 ~~--~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~-vn~i~PG~v~t 196 (253)
T PRK05867 152 IN--VPQQVSHYCASKAAVIHLTKAMAVELAPHKIR-VNSVSPGYILT 196 (253)
T ss_pred CC--CCCCccchHHHHHHHHHHHHHHHHHHhHhCeE-EEEeecCCCCC
Confidence 31 22 45689999999999999999999999999 77999999975
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=243.52 Aligned_cols=189 Identities=19% Similarity=0.241 Sum_probs=167.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-C-CCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++++|++|||||++|||++++++|+++|++ |++++|+.+..+...+.+.. . +.++.++++|++|+++++++++++
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGAS--VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV 81 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88999988776665444332 2 247889999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||..
T Consensus 82 ~~~~g~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~ 148 (265)
T PRK07062 82 EARFGGVDMLVNNAGQG-------RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAA------SIVCVNSLL 148 (265)
T ss_pred HHhcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCc------EEEEecccc
Confidence 99999999999999976 34567788899999999999999999999999999887655 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 149 ~~~~---~~~~~~y~asKaal~~~~~~la~e~~~~gi~-v~~i~PG~v~t 194 (265)
T PRK07062 149 ALQP---EPHMVATSAARAGLLNLVKSLATELAPKGVR-VNSILLGLVES 194 (265)
T ss_pred ccCC---CCCchHhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCcccc
Confidence 8766 6778899999999999999999999999999 77999999874
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=227.58 Aligned_cols=188 Identities=20% Similarity=0.253 Sum_probs=167.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++.|+++||||++|||++++..|+++|++ |++++++...++.....+..+ .+-..+.||+++..+++..+++..+.
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Gar--v~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGAR--VAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcE--EEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHh
Confidence 567899999999999999999999999997 888999888777765555443 35567899999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhc-CCCCcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~~~~~~~~~iv~iss~~~~ 183 (231)
+|++++||||||+. .+..+..++.++|++.+.+|+.+.|...|++.+.|.. +..+ .+|||+||+-|.
T Consensus 88 ~g~psvlVncAGIt-------rD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~-----~sIiNvsSIVGk 155 (256)
T KOG1200|consen 88 LGTPSVLVNCAGIT-------RDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQG-----LSIINVSSIVGK 155 (256)
T ss_pred cCCCcEEEEcCccc-------cccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCC-----ceEEeehhhhcc
Confidence 99999999999998 5888899999999999999999999999999998433 2222 499999999999
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .-|+..|+++|+++.+|+++.++|++.++|| +|+|.||+|.+
T Consensus 156 iG---N~GQtnYAAsK~GvIgftktaArEla~knIr-vN~VlPGFI~t 199 (256)
T KOG1200|consen 156 IG---NFGQTNYAASKGGVIGFTKTAARELARKNIR-VNVVLPGFIAT 199 (256)
T ss_pred cc---cccchhhhhhcCceeeeeHHHHHHHhhcCce-EeEeccccccC
Confidence 98 6788899999999999999999999999999 88999999864
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=242.94 Aligned_cols=190 Identities=15% Similarity=0.199 Sum_probs=155.9
Q ss_pred ccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|++||||| ++|||+++|++|+++|++ |++.+|+....+.+.+.....+ ....++||++|+++++++++++.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAE--LAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence 67999999997 679999999999999997 7777775432233333333323 456789999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||||+...... ....+++.+.++|++++++|+.+++.++++++|.|++++ | +||++||..+.
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~--~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g------~Iv~iss~~~~ 151 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEAL--SGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-S------AIVALSYLGAV 151 (261)
T ss_pred HhCCCcEEEECCccCCcccc--ccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-c------EEEEEcccccc
Confidence 99999999999997631000 011245678889999999999999999999999997543 3 89999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .|++..|+++|+|+.+|+++++.|++++||+ +|+|+||.|++
T Consensus 152 ~~---~~~~~~Y~asKaal~~l~~~la~e~~~~gIr-Vn~i~PG~v~T 195 (261)
T PRK08690 152 RA---IPNYNVMGMAKASLEAGIRFTAACLGKEGIR-CNGISAGPIKT 195 (261)
T ss_pred cC---CCCcccchhHHHHHHHHHHHHHHHhhhcCeE-EEEEecCcccc
Confidence 65 6888999999999999999999999999999 77999999975
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=243.84 Aligned_cols=189 Identities=15% Similarity=0.193 Sum_probs=157.6
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++|++|||||+ +|||+++|+.|+++|++ |++.+|++...+.+.+..++.+ ....+++|++|+++++++++++.
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~--V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAE--LAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHH
Confidence 5678999999997 89999999999999997 7777776432333333333333 35678999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|++|||||+..+.. ...++.+.+.++|++.+++|+.+++.++++++|.|.++ | +||+++|..+
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~Iv~iss~~~ 152 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDE---LTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG--G------SILTLTYYGA 152 (272)
T ss_pred HhcCCCcEEEECCcccCccc---cccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--c------eEEEEecccc
Confidence 99999999999999753100 02456788899999999999999999999999999643 3 9999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .|++..|++||+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 153 ~~~---~p~~~~Y~asKaal~~l~~~la~el~~~gIr-Vn~v~PG~v~T 197 (272)
T PRK08159 153 EKV---MPHYNVMGVAKAALEASVKYLAVDLGPKNIR-VNAISAGPIKT 197 (272)
T ss_pred ccC---CCcchhhhhHHHHHHHHHHHHHHHhcccCeE-EEEeecCCcCC
Confidence 554 6888899999999999999999999999999 77999999975
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=250.02 Aligned_cols=189 Identities=17% Similarity=0.214 Sum_probs=170.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+++.++.+.+.++..+.++.++.+|++|+++++++++++.+
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~--Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGAR--LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 88899998877776666666677899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.| +||+++|..+.
T Consensus 81 ~~g~iD~lVnnAG~~-------~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g------~iV~isS~~~~ 147 (330)
T PRK06139 81 FGGRIDVWVNNVGVG-------AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHG------IFINMISLGGF 147 (330)
T ss_pred hcCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCC------EEEEEcChhhc
Confidence 999999999999986 35667888999999999999999999999999999887765 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhcccc-CCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKE-GSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~-gi~~~~~v~pg~~~~ 231 (231)
.+ .|++..|++||+++.+|+++++.|+.+. ||+ +++|+||.+++
T Consensus 148 ~~---~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~-V~~v~Pg~v~T 192 (330)
T PRK06139 148 AA---QPYAAAYSASKFGLRGFSEALRGELADHPDIH-VCDVYPAFMDT 192 (330)
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeE-EEEEecCCccC
Confidence 66 6788899999999999999999999875 999 66999999975
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=241.45 Aligned_cols=190 Identities=15% Similarity=0.179 Sum_probs=153.5
Q ss_pred cccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++||||| ++|||+++|++|+++|++ |++.+|.....+.+.+..+..+. ..++++|++|+++++++++++.
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAE--LAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe--EEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHH
Confidence 367899999996 679999999999999997 77776543222333333333232 3578999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|++|||||....... ....+++.+.++|++.+++|+.+++.++++++|+|.++ | +||+++|..+
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~--~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~--g------~Ii~iss~~~ 149 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAI--AGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD--A------SLLTLSYLGA 149 (260)
T ss_pred HHhCCCcEEEEccccCCcccc--ccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC--c------eEEEEecccc
Confidence 999999999999997531000 01124567889999999999999999999999999532 3 8999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+.+|+++++.|++++||+ +|+|+||.|++
T Consensus 150 ~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-Vn~i~PG~v~T 194 (260)
T PRK06997 150 ERV---VPNYNTMGLAKASLEASVRYLAVSLGPKGIR-ANGISAGPIKT 194 (260)
T ss_pred ccC---CCCcchHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeeCcccc
Confidence 655 6788899999999999999999999999999 77999999874
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=244.11 Aligned_cols=190 Identities=17% Similarity=0.240 Sum_probs=156.4
Q ss_pred ccccccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc---------C-C---CceeEEEe
Q 026924 22 ASVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---------F-P---ERLDVLQL 86 (231)
Q Consensus 22 ~~~~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~---------~-~---~~v~~~~~ 86 (231)
+.++++||++||||| ++|||+++|+.|++.|++ |++ +|+...++........ . + .....+++
T Consensus 3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~--Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAE--ILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE--EEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence 345689999999999 899999999999999997 777 6776666554322221 1 1 12467889
Q ss_pred cC--CC------------------hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhh
Q 026924 87 DL--TV------------------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146 (231)
Q Consensus 87 Dl--s~------------------~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 146 (231)
|+ ++ +++++++++++.+++|++|+||||||.... ...++.+.+.++|++++++|+
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~-----~~~~~~~~~~e~~~~~~~vN~ 154 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPE-----VTKPLLETSRKGYLAAISASS 154 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc-----CCCChhhCCHHHHHHHHHHHh
Confidence 98 33 448999999999999999999999986420 135788899999999999999
Q ss_pred hHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCc-cchhhhHHHHHHHHHHhhhhccc-cCCceeeec
Q 026924 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNHDKICVSGVWSK-EGSSYMYSV 224 (231)
Q Consensus 147 ~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v 224 (231)
.+++.++|+++|.|.++ | +||+++|..+..+ .|++ ..|+++|+|+++|+++++.|+++ +||| +|+|
T Consensus 155 ~~~~~l~~~~~p~m~~~--G------~II~isS~a~~~~---~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIr-Vn~V 222 (303)
T PLN02730 155 YSFVSLLQHFGPIMNPG--G------ASISLTYIASERI---IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIR-VNTI 222 (303)
T ss_pred HHHHHHHHHHHHHHhcC--C------EEEEEechhhcCC---CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeE-EEEE
Confidence 99999999999999764 4 9999999887765 5654 47999999999999999999986 7999 7799
Q ss_pred cCCCCCC
Q 026924 225 ASRHCRY 231 (231)
Q Consensus 225 ~pg~~~~ 231 (231)
+||.|++
T Consensus 223 ~PG~v~T 229 (303)
T PLN02730 223 SAGPLGS 229 (303)
T ss_pred eeCCccC
Confidence 9999975
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=237.54 Aligned_cols=191 Identities=21% Similarity=0.265 Sum_probs=164.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++++|++|||||++|||+++|++|+++|++ |++.+|+.+. .+.+.+.+...+.++.++++|++++++++++++++.
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 81 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGAD--VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE 81 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 8888887543 344444444456688899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +||++||..+
T Consensus 82 ~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~ 148 (254)
T PRK06114 82 AELGALTLAVNAAGIAN-------ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGG------SIVNIASMSG 148 (254)
T ss_pred HHcCCCCEEEECCCCCC-------CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc------EEEEECchhh
Confidence 99999999999999763 4567788999999999999999999999999999876654 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+.. .+.+..|+++|+|+++++++++.|+.++||+ +|+|+||.+++
T Consensus 149 ~~~~~-~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~-v~~v~PG~i~t 195 (254)
T PRK06114 149 IIVNR-GLLQAHYNASKAGVIHLSKSLAMEWVGRGIR-VNSISPGYTAT 195 (254)
T ss_pred cCCCC-CCCcchHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEeecCccC
Confidence 76521 1236789999999999999999999999999 77999999874
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=239.09 Aligned_cols=195 Identities=15% Similarity=0.188 Sum_probs=162.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++++|++|||||++|||+++|++|++.|++ |++++| +++..+.+.+..+ ..+.++.++++|++|+++++++++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVN--IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999997 766654 4444444433332 33568999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|++|||||...+... ....++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.| +||++||..
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~ 154 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVV-GGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGG------SIISLSSTG 154 (260)
T ss_pred HHhcCCccEEEECccccccccc-cccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCE------EEEEEeccc
Confidence 9999999999999986421100 012456778889999999999999999999999999876554 999999987
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+++|+++++.|+.++||+ +|+|+||.+|+
T Consensus 155 ~~~~---~~~~~~Y~asK~a~~~~~~~la~el~~~gi~-v~~v~PG~i~T 200 (260)
T PRK08416 155 NLVY---IENYAGHGTSKAAVETMVKYAATELGEKNIR-VNAVSGGPIDT 200 (260)
T ss_pred cccC---CCCcccchhhHHHHHHHHHHHHHHhhhhCeE-EEEEeeCcccC
Confidence 7655 6788899999999999999999999999999 67999999985
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=240.93 Aligned_cols=189 Identities=14% Similarity=0.199 Sum_probs=166.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|++|||||++|||++++++|+++|++ |++++|+.+.++.+.+.++..+.++.++++|++|++++.++++++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGAR--VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999997 888899877666655555544667889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ ++||++||..+..
T Consensus 81 ~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~-----g~iv~isS~~~~~ 148 (275)
T PRK05876 81 LGHVDVVFSNAGIVV-------GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTG-----GHVVFTASFAGLV 148 (275)
T ss_pred cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-----CEEEEeCChhhcc
Confidence 999999999999863 4567788999999999999999999999999999776522 4999999998876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+++.+|+++++.|+.++||+ +++|+||.+++
T Consensus 149 ~---~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 191 (275)
T PRK05876 149 P---NAGLGAYGVAKYGVVGLAETLAREVTADGIG-VSVLCPMVVET 191 (275)
T ss_pred C---CCCCchHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEEeCcccc
Confidence 6 6788899999999999999999999999999 66999999874
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=237.79 Aligned_cols=188 Identities=18% Similarity=0.263 Sum_probs=165.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||.+++++|+++|++ |++.+|+ ...+.+.+.....+.++.++++|++++++++++++++.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGAD--IIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 8888887 444555555555566889999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||..+.
T Consensus 88 ~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 154 (258)
T PRK06935 88 EFGKIDILVNNAGTIR-------RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG------KIINIASMLSF 154 (258)
T ss_pred HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCe------EEEEECCHHhc
Confidence 9999999999999752 4566778889999999999999999999999999887655 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+.+..|+++|+|++++++++++|+.+.||+ +|+|+||.+++
T Consensus 155 ~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~i~PG~v~t 198 (258)
T PRK06935 155 QG---GKFVPAYTASKHGVAGLTKAFANELAAYNIQ-VNAIAPGYIKT 198 (258)
T ss_pred cC---CCCchhhHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEeccccc
Confidence 66 6778899999999999999999999999999 67999999874
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=237.10 Aligned_cols=189 Identities=18% Similarity=0.236 Sum_probs=167.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++.+|+++..+.+.+.+...+.++..+++|++++++++++++++.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~--vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAE--IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999996 88899987766665555544456788899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.+.+.+++.+ +||++||..+.
T Consensus 83 ~~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~ 149 (254)
T PRK08085 83 DIGPIDVLINNAGIQ-------RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAG------KIINICSMQSE 149 (254)
T ss_pred hcCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEccchhc
Confidence 999999999999976 34567788899999999999999999999999999776554 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 150 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~pG~~~t 193 (254)
T PRK08085 150 LG---RDTITPYAASKGAVKMLTRGMCVELARHNIQ-VNGIAPGYFKT 193 (254)
T ss_pred cC---CCCCcchHHHHHHHHHHHHHHHHHHHhhCeE-EEEEEeCCCCC
Confidence 66 6778899999999999999999999999999 77999999874
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=235.32 Aligned_cols=189 Identities=17% Similarity=0.241 Sum_probs=162.1
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++++||++||||+++|||++++++|+++|++ |++.+++.. ++..+.....+.++..+++|++++++++++++++.
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~--vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCD--IVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999997 777766532 23333333345678899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+ ++||++||..+
T Consensus 81 ~~~~~~D~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----g~iv~isS~~~ 148 (253)
T PRK08993 81 AEFGHIDILVNNAGLIR-------REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNG-----GKIINIASMLS 148 (253)
T ss_pred HHhCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC-----eEEEEECchhh
Confidence 99999999999999753 4556788889999999999999999999999999776432 49999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+....|+++|+|+++++++++.|+.++||+ +|+|+||.+++
T Consensus 149 ~~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~-v~~v~pG~v~T 193 (253)
T PRK08993 149 FQG---GIRVPSYTASKSGVMGVTRLMANEWAKHNIN-VNAIAPGYMAT 193 (253)
T ss_pred ccC---CCCCcchHHHHHHHHHHHHHHHHHhhhhCeE-EEEEeeCcccC
Confidence 765 5777899999999999999999999999999 77999999975
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=235.98 Aligned_cols=188 Identities=21% Similarity=0.246 Sum_probs=153.9
Q ss_pred cccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|+++|||| ++|||+++|++|+++|++ |++.+|+... +.+.+.....+.++.++++|++|+++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~--v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAE--VVLTGFGRAL-RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCE--EEEecCccch-hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 578999999999 899999999999999997 8888876411 11122222224467889999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||||+..... ...++.+.+.++|++.+++|+.+++.+++.++|+|.++ | +||++++..
T Consensus 81 ~~~g~iD~li~nAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~--g------~Iv~is~~~- 148 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSA---LGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG--G------SIVGLDFDA- 148 (256)
T ss_pred HHcCCCcEEEEccccccccc---cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC--c------eEEEEeecc-
Confidence 99999999999999762100 01346677889999999999999999999999999743 3 899988643
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+.+..|++||+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 149 ~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-vn~v~PG~v~T 193 (256)
T PRK07889 149 TVA---WPAYDWMGVAKAALESTNRYLARDLGPRGIR-VNLVAAGPIRT 193 (256)
T ss_pred ccc---CCccchhHHHHHHHHHHHHHHHHHhhhcCeE-EEeeccCcccC
Confidence 223 5778889999999999999999999999999 67999999975
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=234.64 Aligned_cols=190 Identities=23% Similarity=0.278 Sum_probs=168.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+.+++|++|||||+++||.+++++|+++|++ |++++|+.+..+.+.+..+..+.++.++.+|+++.+++.++++++.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAK--VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88889988776665555555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|++|||+|... +..++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +++++||..+.
T Consensus 81 ~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~ii~~sS~~~~ 148 (253)
T PRK06172 81 AYGRLDYAFNNAGIEI------EQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGG------AIVNTASVAGL 148 (253)
T ss_pred HhCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECchhhc
Confidence 9999999999999753 33456778899999999999999999999999999776654 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+++++++++++.|+.++||+ +|+|+||.+++
T Consensus 149 ~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~-v~~i~PG~v~t 192 (253)
T PRK06172 149 GA---APKMSIYAASKHAVIGLTKSAAIEYAKKGIR-VNAVCPAVIDT 192 (253)
T ss_pred cC---CCCCchhHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeCCccC
Confidence 66 6788899999999999999999999999999 67999999974
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=236.96 Aligned_cols=196 Identities=20% Similarity=0.270 Sum_probs=168.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|+++||||++|||++++++|+++|++ |++.+|+.+..+.+.+.....+.++.++++|+++++++.++++++.+
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAK--VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999997 88889987666665555555566889999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCC--------CCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEE
Q 026924 104 KYGSLNLLINASGILSIPNV--------LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA 175 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv 175 (231)
+++++|++|||+|...+... ..+..++.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~ii 157 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG------NII 157 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEE
Confidence 99999999999996542211 1122456778899999999999999999999999999877654 999
Q ss_pred EeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 176 NLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 176 ~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||..+..+ .++...|+++|+|+++++++++.|+++.||+ +|+|+||.+++
T Consensus 158 ~isS~~~~~~---~~~~~~Y~~sK~a~~~l~~~la~e~~~~gir-vn~v~Pg~v~t 209 (278)
T PRK08277 158 NISSMNAFTP---LTKVPAYSAAKAAISNFTQWLAVHFAKVGIR-VNAIAPGFFLT 209 (278)
T ss_pred EEccchhcCC---CCCCchhHHHHHHHHHHHHHHHHHhCccCeE-EEEEEeccCcC
Confidence 9999987765 6778899999999999999999999999999 77999999874
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=240.50 Aligned_cols=187 Identities=21% Similarity=0.280 Sum_probs=165.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++||++|||||++|||++++++|+++|++ |++++|+.+.++.+.+.+.. +.++..+++|++|+++++++++++.+
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAK--LALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999996 88899987766655444432 44677788999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.++. | +||++||..+.
T Consensus 82 ~~g~id~vI~nAG~~-------~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~~ 147 (296)
T PRK05872 82 RFGGIDVVVANAGIA-------SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-G------YVLQVSSLAAF 147 (296)
T ss_pred HcCCCCEEEECCCcC-------CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEEeCHhhc
Confidence 999999999999986 356778889999999999999999999999999987643 3 99999998887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+++++|+++++.|++++||+ +|+++||.+++
T Consensus 148 ~~---~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~-v~~v~Pg~v~T 191 (296)
T PRK05872 148 AA---APGMAAYCASKAGVEAFANALRLEVAHHGVT-VGSAYLSWIDT 191 (296)
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHHHHHHCcE-EEEEecCcccc
Confidence 66 6788899999999999999999999999999 77999999874
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=233.97 Aligned_cols=176 Identities=22% Similarity=0.274 Sum_probs=157.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++.+|+.... .++.+++||++++++++++++++.++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~--Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSN--VINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 88888876431 25788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+.+.| +||++||..+..
T Consensus 70 ~~~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~ 136 (258)
T PRK06398 70 YGRIDILVNNAGIE-------SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKG------VIINIASVQSFA 136 (258)
T ss_pred cCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEeCcchhcc
Confidence 99999999999976 34567888999999999999999999999999999876554 999999988775
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+|+++++++++.|+.++ |+ +|+|+||.+++
T Consensus 137 ~---~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~-vn~i~PG~v~T 178 (258)
T PRK06398 137 V---TRNAAAYVTSKHAVLGLTRSIAVDYAPT-IR-CVAVCPGSIRT 178 (258)
T ss_pred C---CCCCchhhhhHHHHHHHHHHHHHHhCCC-CE-EEEEecCCccc
Confidence 5 6788899999999999999999999976 98 77999999874
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=237.76 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=161.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC--CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++|||||++|||++++++|+++|++ |++.+|+. +..+.+.+.....+.++.++.+|+++++++.++++++.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~--Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGAD--VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 478899999999999999999999999997 77777653 23334444444446678899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|++|||||... +..++.+.+.++|++.+++|+.+++.++++++|+|.+. + +||++||..+
T Consensus 124 ~~~g~id~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g------~iv~iSS~~~ 189 (294)
T PRK07985 124 KALGGLDIMALVAGKQV------AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--A------SIITTSSIQA 189 (294)
T ss_pred HHhCCCCEEEECCCCCc------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--C------EEEEECCchh
Confidence 99999999999999643 34567788899999999999999999999999998653 2 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++.+|+++|+|+++++++++.|++++||+ +|+|+||.|++
T Consensus 190 ~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-vn~i~PG~v~t 234 (294)
T PRK07985 190 YQP---SPHLLDYAATKAAILNYSRGLAKQVAEKGIR-VNIVAPGPIWT 234 (294)
T ss_pred ccC---CCCcchhHHHHHHHHHHHHHHHHHHhHhCcE-EEEEECCcCcc
Confidence 765 6788899999999999999999999999999 67999999874
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=232.42 Aligned_cols=190 Identities=22% Similarity=0.249 Sum_probs=167.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||.+++++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|+++.++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAH--VIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999996 88889987766666555555566788999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|++|||+|... ...++.+.+.++|++.+++|+.+++.++++++|+|.+.+.+ +++++||..+.
T Consensus 82 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~ 149 (252)
T PRK07035 82 RHGRLDILVNNAAANP------YFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG------SIVNVASVNGV 149 (252)
T ss_pred HcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc------EEEEECchhhc
Confidence 9999999999998642 23456778889999999999999999999999999876654 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+++++++++++.|+.++||+ +|+|+||.+++
T Consensus 150 ~~---~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~-v~~i~PG~v~t 193 (252)
T PRK07035 150 SP---GDFQGIYSITKAAVISMTKAFAKECAPFGIR-VNALLPGLTDT 193 (252)
T ss_pred CC---CCCCcchHHHHHHHHHHHHHHHHHHhhcCEE-EEEEeeccccC
Confidence 65 6788899999999999999999999999999 77999999874
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=233.62 Aligned_cols=189 Identities=19% Similarity=0.290 Sum_probs=168.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||++++++|+++|++ |++.+|+.+..+...+..+..+.++.++++|++++++++++++++.+
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~--vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGAT--IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 77888887766665555555566899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|... ..++.+.+.++|++++++|+.+++.+.+.++|+|.+.+.+ +||+++|..+.
T Consensus 84 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~ 150 (265)
T PRK07097 84 EVGVIDILVNNAGIIK-------RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHG------KIINICSMMSE 150 (265)
T ss_pred hCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCcccc
Confidence 9999999999999863 4567788899999999999999999999999999876654 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|++++.++++++.|+.+.||+ +|+|+||.+++
T Consensus 151 ~~---~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~-v~~v~Pg~v~t 194 (265)
T PRK07097 151 LG---RETVSAYAAAKGGLKMLTKNIASEYGEANIQ-CNGIGPGYIAT 194 (265)
T ss_pred CC---CCCCccHHHHHHHHHHHHHHHHHHhhhcCce-EEEEEeccccc
Confidence 66 6778899999999999999999999999999 77999999864
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=237.96 Aligned_cols=187 Identities=18% Similarity=0.208 Sum_probs=162.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++|||||++|||++++++|+++|++ |++..++.+ ..+.+.+.++..+.++.++++|+++.++++++++++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~--V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGAD--IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCE--EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 477899999999999999999999999997 777666543 2333444555556788999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|+|.+. ++||++||..+
T Consensus 130 ~~~g~iD~lV~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~~iv~~sS~~~ 195 (300)
T PRK06128 130 KELGGLDILVNIAGKQT------AVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG--------ASIINTGSIQS 195 (300)
T ss_pred HHhCCCCEEEECCcccC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC--------CEEEEECCccc
Confidence 99999999999999753 34567888999999999999999999999999998753 29999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++|+++++.|+.++||+ +|+|.||.+++
T Consensus 196 ~~~---~~~~~~Y~asK~a~~~~~~~la~el~~~gI~-v~~v~PG~i~t 240 (300)
T PRK06128 196 YQP---SPTLLDYASTKAAIVAFTKALAKQVAEKGIR-VNAVAPGPVWT 240 (300)
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEEECcCcC
Confidence 765 6778899999999999999999999999999 77999999874
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=235.45 Aligned_cols=191 Identities=24% Similarity=0.327 Sum_probs=164.0
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..++++|++|||||++|||++++++|+++|++ |++.+|+.+..+.+.+.... +.++.++++|++|+++++++++++.
T Consensus 13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (280)
T PLN02253 13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAK--VCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTV 89 (280)
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999997 88888876555544433322 3578999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||...+ ...++.+.+.++|++++++|+.+++.+++++.+.|.+++.| ++++++|..+
T Consensus 90 ~~~g~id~li~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~ii~isS~~~ 158 (280)
T PLN02253 90 DKFGTLDIMVNNAGLTGP-----PCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG------SIVSLCSVAS 158 (280)
T ss_pred HHhCCCCEEEECCCcCCC-----CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------eEEEecChhh
Confidence 999999999999997531 12356788899999999999999999999999999876655 9999999888
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+|+++++++++.|++++||+ +|+++||.+++
T Consensus 159 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~i~pg~v~t 203 (280)
T PLN02253 159 AIG---GLGPHAYTGSKHAVLGLTRSVAAELGKHGIR-VNCVSPYAVPT 203 (280)
T ss_pred ccc---CCCCcccHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcccc
Confidence 766 5667789999999999999999999999999 77999999863
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=232.33 Aligned_cols=188 Identities=18% Similarity=0.238 Sum_probs=161.1
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCC-----------CCccchhhhhhcCCCceeEEEecCCCh
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATGLLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~-----------~~~~~~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
+++||++|||||+ +|||+++|++|+++|++ |++.+++. ...+.+.+..+..+.++.++++|++++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~ 80 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGAD--IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN 80 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCe--EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 5789999999999 49999999999999997 77665421 111122333444567899999999999
Q ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCc
Q 026924 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV 171 (231)
Q Consensus 92 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (231)
++++++++++.+.+|++|++|||||... ..++.+.+.++|++++++|+.+++.+.++++|.|.+++.|
T Consensus 81 ~~i~~~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g----- 148 (256)
T PRK12859 81 DAPKELLNKVTEQLGYPHILVNNAAYST-------NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGG----- 148 (256)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe-----
Confidence 9999999999999999999999999763 4567889999999999999999999999999999876654
Q ss_pred eEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 172 ~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||++||..+..+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 149 -~iv~isS~~~~~~---~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~-v~~v~PG~i~t 203 (256)
T PRK12859 149 -RIINMTSGQFQGP---MVGELAYAATKGAIDALTSSLAAEVAHLGIT-VNAINPGPTDT 203 (256)
T ss_pred -EEEEEcccccCCC---CCCchHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEEccccC
Confidence 9999999887655 6788999999999999999999999999999 77999999874
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=231.32 Aligned_cols=183 Identities=17% Similarity=0.176 Sum_probs=158.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC-ceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||++|||+++|++|++ |++ |++++|+.+.++.+.+.++..+. ++.+++||++|+++++++++++.+.+|+
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~~--Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GED--VVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CCE--EEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999994 986 88889998777776655554443 5889999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCccccCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~~~ 186 (231)
+|++|||+|... .....+.+.+++++.+++|+.+++.+++.++|.|.+++ .| +||++||..+..+
T Consensus 78 id~lv~nag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g------~Iv~isS~~~~~~- 143 (246)
T PRK05599 78 ISLAVVAFGILG-------DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPA------AIVAFSSIAGWRA- 143 (246)
T ss_pred CCEEEEecCcCC-------CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCC------EEEEEeccccccC-
Confidence 999999999763 23345566777888999999999999999999997654 34 9999999988766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+|+.+|+++++.|+.++||+ +|+|+||.|++
T Consensus 144 --~~~~~~Y~asKaa~~~~~~~la~el~~~~I~-v~~v~PG~v~T 185 (246)
T PRK05599 144 --RRANYVYGSTKAGLDAFCQGLADSLHGSHVR-LIIARPGFVIG 185 (246)
T ss_pred --CcCCcchhhHHHHHHHHHHHHHHHhcCCCce-EEEecCCcccc
Confidence 6788899999999999999999999999999 77999999974
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=231.27 Aligned_cols=185 Identities=23% Similarity=0.302 Sum_probs=156.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEee-cCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||++|||++++++|++.|++ |++.+ ++.+..+.+.......+.++..+++|+++.+++..+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGAL--VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 66654 5545444444444444567888999999999999999988753
Q ss_pred ----cC--CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 105 ----YG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 105 ----~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
++ ++|++|||||.. +..++.+.+.++|++++++|+.+++.++++++|.|.+. | +||++|
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~iv~is 144 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIG-------PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--S------RIINIS 144 (252)
T ss_pred hhhhcCCCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--C------eEEEEC
Confidence 34 899999999975 34556778889999999999999999999999999754 3 999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ .+++..|++||+|+++++++++.|++++||+ +|+|+||.|++
T Consensus 145 S~~~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gir-vn~v~Pg~v~t 193 (252)
T PRK12747 145 SAATRIS---LPDFIAYSMTKGAINTMTFTLAKQLGARGIT-VNAILPGFIKT 193 (252)
T ss_pred CcccccC---CCCchhHHHHHHHHHHHHHHHHHHHhHcCCE-EEEEecCCccC
Confidence 9988766 6778899999999999999999999999999 77999999974
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-34 Score=232.39 Aligned_cols=183 Identities=20% Similarity=0.308 Sum_probs=159.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.. +.++.++++|++++++++++++++.++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGAR--VAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999996 888999876555443332 457889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ... .+.+.++|++.+++|+.+++.++++++|.|. ++.| +||+++|..+..
T Consensus 78 ~g~id~lv~~ag~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g------~ii~isS~~~~~ 142 (261)
T PRK08265 78 FGRVDILVNLACTYL-------DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGG------AIVNFTSISAKF 142 (261)
T ss_pred hCCCCEEEECCCCCC-------CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCc------EEEEECchhhcc
Confidence 999999999999753 222 2467889999999999999999999999997 4433 999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 143 ~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~~~t 185 (261)
T PRK08265 143 A---QTGRWLYPASKAAIRQLTRSMAMDLAPDGIR-VNSVSPGWTWS 185 (261)
T ss_pred C---CCCCchhHHHHHHHHHHHHHHHHHhcccCEE-EEEEccCCccC
Confidence 6 6778899999999999999999999999999 77999999864
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=232.73 Aligned_cols=184 Identities=20% Similarity=0.234 Sum_probs=155.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+ ..+.++.++++|+++.+++.++++++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~l~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGAR--VAVLDKSAAGLQELEA---AHGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHh---hcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999997 8888988755444332 23557889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhc----hHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVE----KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
++++|++|||||... ...++.+.+ .++|++.+++|+.+++.++++++|.|.+++ | ++|+++|.
T Consensus 77 ~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g------~iv~~sS~ 143 (262)
T TIGR03325 77 FGKIDCLIPNAGIWD------YSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-G------SVIFTISN 143 (262)
T ss_pred hCCCCEEEECCCCCc------cCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-C------CEEEEecc
Confidence 999999999999752 122222222 357999999999999999999999997654 3 89999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|+++|+|+++|+++++.|++++ |+ +|+|+||.+++
T Consensus 144 ~~~~~---~~~~~~Y~~sKaa~~~l~~~la~e~~~~-ir-vn~i~PG~i~t 189 (262)
T TIGR03325 144 AGFYP---NGGGPLYTAAKHAVVGLVKELAFELAPY-VR-VNGVAPGGMSS 189 (262)
T ss_pred ceecC---CCCCchhHHHHHHHHHHHHHHHHhhccC-eE-EEEEecCCCcC
Confidence 87765 5777899999999999999999999987 99 77999999974
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=229.74 Aligned_cols=186 Identities=23% Similarity=0.342 Sum_probs=164.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||+++||++++++|+++|++ |++++|+.+..+.+...+...+.++.++++|++++++++++++++.+++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK--VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999996 888899877766665555545668889999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|.. +..++.+.+.++|++.+++|+.+++.+++.+++.|++.+.+ ++||++||..+..+
T Consensus 80 id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~~-- 145 (256)
T PRK08643 80 LNVVVNNAGVA-------PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHG-----GKIINATSQAGVVG-- 145 (256)
T ss_pred CCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CEEEEECccccccC--
Confidence 99999999976 35567788899999999999999999999999999765422 48999999887766
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.+++.++.|+.++||+ +|+|+||.+++
T Consensus 146 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~i~Pg~v~t 187 (256)
T PRK08643 146 -NPELAVYSSTKFAVRGLTQTAARDLASEGIT-VNAYAPGIVKT 187 (256)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcccCcE-EEEEeeCCCcC
Confidence 6778899999999999999999999999999 67999999864
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=231.54 Aligned_cols=191 Identities=17% Similarity=0.236 Sum_probs=161.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc-------cchhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-------TGLLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-------~~~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+.. +.+.+.+...+.++.++++|+++++++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~ 79 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGAN--IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA 79 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 3568899999999999999999999999997 88888876532 22233334456789999999999999999
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++++.+.++++|++|||+|... ..+..+.+.++|++.+++|+.+++.++++++|+|.+++.+ ++++
T Consensus 80 ~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g------~iv~ 146 (273)
T PRK08278 80 AVAKAVERFGGIDICVNNASAIN-------LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP------HILT 146 (273)
T ss_pred HHHHHHHHhCCCCEEEECCCCcC-------CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCC------EEEE
Confidence 99999999999999999999763 4456778889999999999999999999999999877654 9999
Q ss_pred eccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC-CCCC
Q 026924 177 LSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR-HCRY 231 (231)
Q Consensus 177 iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg-~~~~ 231 (231)
++|..+..+. ..+++..|+++|+++++++++++.|+.++||+ +|+|+|| .+++
T Consensus 147 iss~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~-v~~i~Pg~~i~t 200 (273)
T PRK08278 147 LSPPLNLDPK-WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIA-VNALWPRTTIAT 200 (273)
T ss_pred ECCchhcccc-ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcE-EEEEeCCCcccc
Confidence 9987665441 12777899999999999999999999999999 6799999 5654
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=230.15 Aligned_cols=186 Identities=21% Similarity=0.330 Sum_probs=156.9
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||+++|++|+++|++ |++.+++.+.. .. .... .++.++++|++++++++++++++.
T Consensus 2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~--~~-~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (255)
T PRK06463 2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAK--VAVLYNSAENE--AK-ELRE--KGVFTIKCDVGNRDQVKKSKEVVE 74 (255)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCcHHH--HH-HHHh--CCCeEEEecCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999997 66665543221 11 1111 147889999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||+++|..+
T Consensus 75 ~~~~~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g------~iv~isS~~~ 141 (255)
T PRK06463 75 KEFGRVDVLVNNAGIM-------YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG------AIVNIASNAG 141 (255)
T ss_pred HHcCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHHh
Confidence 9999999999999975 34567778899999999999999999999999999866554 9999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.... .++...|++||+|+++|+++++.|+++.||+ +|+|+||.+++
T Consensus 142 ~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~-v~~i~Pg~v~t 187 (255)
T PRK06463 142 IGTA--AEGTTFYAITKAGIIILTRRLAFELGKYGIR-VNAVAPGWVET 187 (255)
T ss_pred CCCC--CCCccHhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCCCCC
Confidence 5331 4567789999999999999999999999999 77999999874
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=228.33 Aligned_cols=186 Identities=20% Similarity=0.285 Sum_probs=160.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+++||.++|++|+++|++ |++.+|+. .+.+.+.....+.++.++++|+++++++.++++++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~--vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGAD--IVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999997 88888865 23333444444667899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||+|... ...+.+.+.++|++.+++|+.+++.+++++++.|.+++ . +++|++||..+.
T Consensus 78 ~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------g~iv~~sS~~~~ 144 (248)
T TIGR01832 78 FGHIDILVNNAGIIR-------RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRG------GKIINIASMLSF 144 (248)
T ss_pred cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------eEEEEEecHHhc
Confidence 999999999999863 34567788889999999999999999999999997654 3 399999998766
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+....|+++|+++++++++++.|+.++||+ +|+|+||.+++
T Consensus 145 ~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~-v~~v~pg~v~t 188 (248)
T TIGR01832 145 QG---GIRVPSYTASKHGVAGLTKLLANEWAAKGIN-VNAIAPGYMAT 188 (248)
T ss_pred cC---CCCCchhHHHHHHHHHHHHHHHHHhCccCcE-EEEEEECcCcC
Confidence 55 5677899999999999999999999999999 67999999874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=229.34 Aligned_cols=185 Identities=18% Similarity=0.214 Sum_probs=161.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
||++|||||++|||++++++|+++|++ |++++|+....+.+.+.....+.++.++++|++++++++++++++.+++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGAN--VVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999996 888999877666655555444568999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++++|.+.+.. ++|+++||..+..+
T Consensus 79 id~lI~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~~~-- 144 (252)
T PRK07677 79 IDALINNAAGN-------FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIK-----GNIINMVATYAWDA-- 144 (252)
T ss_pred ccEEEECCCCC-------CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCC-----EEEEEEcChhhccC--
Confidence 99999999864 23566788999999999999999999999999998664321 49999999987655
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccc-cCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSK-EGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|+|+++++++++.|+.+ +||+ +|+|+||.++
T Consensus 145 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~-v~~v~PG~v~ 186 (252)
T PRK07677 145 -GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIR-VNAIAPGPIE 186 (252)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhCcccCeE-EEEEeecccc
Confidence 577789999999999999999999975 7999 6799999987
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=229.21 Aligned_cols=188 Identities=19% Similarity=0.233 Sum_probs=160.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..++++|++|||||++|||++++++|+++|++ |++++|++. .+.+.+.+...+.++.++++|+++++++.++++++.
T Consensus 3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~--v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGAR--VVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999997 888888753 333333333445678899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||||... ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+
T Consensus 80 ~~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~ 147 (260)
T PRK12823 80 EAFGRIDVLINNVGGTI------WAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG------AIVNVSSIAT 147 (260)
T ss_pred HHcCCCeEEEECCcccc------CCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEEcCccc
Confidence 99999999999998642 24567788999999999999999999999999999877654 9999999765
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. + +...+|+++|+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 148 ~-~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 190 (260)
T PRK12823 148 R-G----INRVPYSAAKGGVNALTASLAFEYAEHGIR-VNAVAPGGTEA 190 (260)
T ss_pred c-C----CCCCccHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCccCC
Confidence 3 2 345689999999999999999999999999 77999999864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=229.29 Aligned_cols=188 Identities=20% Similarity=0.316 Sum_probs=166.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+++||++++++|+++|++ |++.+|+++..+.+.+.++..+.++.++++|++++++++++++++.++
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAE--VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999997 888899876665555555444567899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.+.|.+++.| +||++||..+..
T Consensus 85 ~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~iss~~~~~ 151 (255)
T PRK07523 85 IGPIDILVNNAGMQF-------RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAG------KIINIASVQSAL 151 (255)
T ss_pred cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe------EEEEEccchhcc
Confidence 999999999999763 4567788899999999999999999999999999876654 999999987665
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|++++.++++++.|++++||+ +|+|.||.++.
T Consensus 152 ~---~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~-v~~i~pg~~~t 194 (255)
T PRK07523 152 A---RPGIAPYTATKGAVGNLTKGMATDWAKHGLQ-CNAIAPGYFDT 194 (255)
T ss_pred C---CCCCccHHHHHHHHHHHHHHHHHHhhHhCeE-EEEEEECcccC
Confidence 5 6788899999999999999999999999999 67999999863
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=234.10 Aligned_cols=194 Identities=18% Similarity=0.248 Sum_probs=162.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.++.++++|++|||||++|||+++|++|+++|++ |++.+++. ...+.+.+.+...+.++.++++|++++++++++++
T Consensus 5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~--Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~ 82 (306)
T PRK07792 5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGAT--VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVA 82 (306)
T ss_pred cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 3456789999999999999999999999999997 77777753 33444555555556789999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC-cccCceEEEEec
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG-IERDVAVVANLS 178 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~~~~iv~is 178 (231)
++.+ +|++|+||||||... ...+.+.+.++|++.+++|+.+++.+++++.++|+++... .....++||+++
T Consensus 83 ~~~~-~g~iD~li~nAG~~~-------~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~is 154 (306)
T PRK07792 83 TAVG-LGGLDIVVNNAGITR-------DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTS 154 (306)
T ss_pred HHHH-hCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEC
Confidence 9988 999999999999863 4567788899999999999999999999999999754210 001124999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
|..+..+ .+++..|+++|+++++|+++++.|+.++||+ +|+|+||.
T Consensus 155 S~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-vn~i~Pg~ 200 (306)
T PRK07792 155 SEAGLVG---PVGQANYGAAKAGITALTLSAARALGRYGVR-ANAICPRA 200 (306)
T ss_pred CcccccC---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeE-EEEECCCC
Confidence 9887766 5778899999999999999999999999999 77999984
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=228.59 Aligned_cols=190 Identities=17% Similarity=0.233 Sum_probs=162.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++|++|||||+++||+++|++|+++|++ |++..|+. +..+.+.+.++..+.++.++++|++++++++++++++.
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~--vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAK--VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 77767754 33344444444446688899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++++|.+++.. +++|++||..+
T Consensus 81 ~~~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~-----g~iv~~sS~~~ 148 (261)
T PRK08936 81 KEFGTLDVMINNAGIEN-------AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIK-----GNIINMSSVHE 148 (261)
T ss_pred HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEEccccc
Confidence 99999999999999763 4456778889999999999999999999999999875421 39999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++++++++.|+.+.||+ +|+|+||.+|+
T Consensus 149 ~~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~-v~~v~pg~v~t 193 (261)
T PRK08936 149 QIP---WPLFVHYAASKGGVKLMTETLAMEYAPKGIR-VNNIGPGAINT 193 (261)
T ss_pred cCC---CCCCcccHHHHHHHHHHHHHHHHHHhhcCeE-EEEEEECcCCC
Confidence 655 6788899999999999999999999999999 67999999974
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=227.90 Aligned_cols=188 Identities=20% Similarity=0.258 Sum_probs=164.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||++++++|+++|++ |++.+|+.+..+.+.+.....+.++.++++|++++++++++++.+.+
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~--vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 88888887766665555554566888999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|++|||+|... ..++ +.+.++|++.+++|+.+++.+++++.|+|.+.+.+ ++|++||..+.
T Consensus 85 ~~~~~d~li~~ag~~~-------~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~ 150 (255)
T PRK06113 85 KLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAAE 150 (255)
T ss_pred HcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc------EEEEEeccccc
Confidence 9999999999999753 2223 57888999999999999999999999999766544 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+|+++|+++++.++.+.||+ +|+|+||.+++
T Consensus 151 ~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~-v~~v~pg~~~t 194 (255)
T PRK06113 151 NK---NINMTSYASSKAAASHLVRNMAFDLGEKNIR-VNGIAPGAILT 194 (255)
T ss_pred CC---CCCcchhHHHHHHHHHHHHHHHHHhhhhCeE-EEEEecccccc
Confidence 66 6778899999999999999999999999999 67999999874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=230.24 Aligned_cols=184 Identities=22% Similarity=0.261 Sum_probs=155.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|++|||||++|||++++++|+++|++ |++.+|+++..+.+.+. .+.++.++++|++++++++++++++.++
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGAR--VAVLERSAEKLASLRQR---FGDHVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hCCcceEEEccCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999999997 88889987655444332 2457889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHH----HhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSS----LMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
++++|++|||+|... ...++.+.+.++ |++++++|+.+++.++++++|.|.+++ | +||+++|.
T Consensus 78 ~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g------~iv~~sS~ 144 (263)
T PRK06200 78 FGKLDCFVGNAGIWD------YNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-G------SMIFTLSN 144 (263)
T ss_pred cCCCCEEEECCCCcc------cCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-C------EEEEECCh
Confidence 999999999999753 123444444444 889999999999999999999987653 3 99999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|+++|+|+++|+++++.|++++ |+ +|+|+||.|++
T Consensus 145 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la~el~~~-Ir-vn~i~PG~i~t 190 (263)
T PRK06200 145 SSFYP---GGGGPLYTASKHAVVGLVRQLAYELAPK-IR-VNGVAPGGTVT 190 (263)
T ss_pred hhcCC---CCCCchhHHHHHHHHHHHHHHHHHHhcC-cE-EEEEeCCcccc
Confidence 87765 5677789999999999999999999985 99 77999999874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=236.98 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=167.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+++.++.+.+.+...+.++.++++|++|+++++++++++.++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~--Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAK--VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999997 888899887777666666566778999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+..
T Consensus 83 ~g~iD~lInnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g------~iV~isS~~~~~ 149 (334)
T PRK07109 83 LGPIDTWVNNAMVT-------VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG------AIIQVGSALAYR 149 (334)
T ss_pred CCCCCEEEECCCcC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEeCChhhcc
Confidence 99999999999975 34567888999999999999999999999999999887655 999999998876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccc--cCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSK--EGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~--~gi~~~~~v~pg~~~~ 231 (231)
+ .+.+..|+++|+++++|+++++.|+.. .+|+ +++|+||.+++
T Consensus 150 ~---~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~-v~~v~Pg~v~T 194 (334)
T PRK07109 150 S---IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVS-VTMVQPPAVNT 194 (334)
T ss_pred C---CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeE-EEEEeCCCccC
Confidence 6 678889999999999999999999975 4698 66999999874
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=232.26 Aligned_cols=193 Identities=21% Similarity=0.265 Sum_probs=163.9
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++.+.+++|++|||||+||||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|++++.+++++
T Consensus 33 ~~~~~~~~k~vlItGasggIG~~la~~La~~G~~--Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~ 110 (293)
T PRK05866 33 RQPVDLTGKRILLTGASSGIGEAAAEQFARRGAT--VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD 110 (293)
T ss_pred CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 3445778999999999999999999999999997 89999997776666555554466788999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchh--chHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKV--EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+.++++++|++|||||... ..++.+. +.++++..+++|+.+++.++++++|.|.+.+.| +||++|
T Consensus 111 ~~~~~g~id~li~~AG~~~-------~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~is 177 (293)
T PRK05866 111 VEKRIGGVDILINNAGRSI-------RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG------HIINVA 177 (293)
T ss_pred HHHHcCCCCEEEECCCCCC-------CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------EEEEEC
Confidence 9999999999999999763 2333332 357888999999999999999999999887665 999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+. .++...|+++|+|+++|+++++.|+.++||+ +++|+||.+++
T Consensus 178 S~~~~~~~--~p~~~~Y~asKaal~~l~~~la~e~~~~gI~-v~~v~pg~v~T 227 (293)
T PRK05866 178 TWGVLSEA--SPLFSVYNASKAALSAVSRVIETEWGDRGVH-STTLYYPLVAT 227 (293)
T ss_pred ChhhcCCC--CCCcchHHHHHHHHHHHHHHHHHHhcccCcE-EEEEEcCcccC
Confidence 97554321 4677899999999999999999999999999 66999999875
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=227.51 Aligned_cols=190 Identities=22% Similarity=0.341 Sum_probs=169.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|+++||||+++||++++++|+++|++ |++++|+++..+.+.+.++..+.++.++.+|+++++++.++++++.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAH--VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARID 83 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCe--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999996 8999998766666555555556679999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.+++.|.+++.+ ++|++||..+
T Consensus 84 ~~~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~ss~~~ 150 (256)
T PRK06124 84 AEHGRLDILVNNVGAR-------DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG------RIIAITSIAG 150 (256)
T ss_pred HhcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEeechh
Confidence 9999999999999976 34577888899999999999999999999999999776654 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+++++++++++.|+.+.||+ +|+|+||.+++
T Consensus 151 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~i~pg~v~t 195 (256)
T PRK06124 151 QVA---RAGDAVYPAAKQGLTGLMRALAAEFGPHGIT-SNAIAPGYFAT 195 (256)
T ss_pred ccC---CCCccHhHHHHHHHHHHHHHHHHHHHHhCcE-EEEEEECCccC
Confidence 766 6888899999999999999999999999999 77999999874
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=227.56 Aligned_cols=189 Identities=21% Similarity=0.291 Sum_probs=166.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+++++|++|||||+++||++++++|+++|++ |++++|+.+..+.+.+.+... +.++.++.+|++++++++++++++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGAD--VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999997 888899876666554444332 458899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+ ++|++||..
T Consensus 83 ~~~~g~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~sS~~ 149 (257)
T PRK09242 83 EDHWDGLHILVNNAGGN-------IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASS------AIVNIGSVS 149 (257)
T ss_pred HHHcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------eEEEECccc
Confidence 99999999999999975 34566788999999999999999999999999999876654 999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|++++.++++++.|+.+.||+ +|+|+||.+++
T Consensus 150 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~i~Pg~i~t 195 (257)
T PRK09242 150 GLTH---VRSGAPYGMTKAALLQMTRNLAVEWAEDGIR-VNAVAPWYIRT 195 (257)
T ss_pred cCCC---CCCCcchHHHHHHHHHHHHHHHHHHHHhCeE-EEEEEECCCCC
Confidence 7766 5777899999999999999999999999999 77999999864
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=220.60 Aligned_cols=184 Identities=25% Similarity=0.365 Sum_probs=161.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC-ceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++||.+++||+.||||++++++|+++|.+ +.+++.+.+..+...++.+..+. .+.|++||+++..++++.++++.
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik--~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIK--VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCch--heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence 3678999999999999999999999999998 66667777777776666554444 89999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++||.||++||+||+. +..+|++.+++|+.|.++-....+|+|.++..| ..|-|||+||..|
T Consensus 79 ~~fg~iDIlINgAGi~---------------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG---~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 79 ATFGTIDILINGAGIL---------------DDKDWERTINVNLTGVINGTQLALPYMDKKQGG---KGGIIVNMSSVAG 140 (261)
T ss_pred HHhCceEEEEcccccc---------------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCC---CCcEEEEeccccc
Confidence 9999999999999986 245699999999999999999999999887533 2269999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhh--ccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGV--WSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e--~~~~gi~~~~~v~pg~~~~ 231 (231)
+.+ .|-.+.|++||+++.+|+|+++.. +.+.||+ +|+||||.+++
T Consensus 141 L~P---~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~-~~avCPG~t~t 187 (261)
T KOG4169|consen 141 LDP---MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVR-FNAVCPGFTRT 187 (261)
T ss_pred cCc---cccchhhhhcccceeeeehhhhhhhhHhhcCEE-EEEECCCcchH
Confidence 877 788889999999999999999877 5788999 66999999863
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=227.87 Aligned_cols=185 Identities=22% Similarity=0.305 Sum_probs=160.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++++|++||||+++|||++++++|+++|++ |++++|+.+..+.+.+.+.. .+.++.++++|+++++++.+++++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 78 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCH--LHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE-- 78 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH--
Confidence 4678999999999999999999999999996 88899987766665544432 356788999999999999888764
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++|++|||+|.. +..++.+.+.++|++++++|+.+++.++++++|.|.+++.| +||+++|..+
T Consensus 79 --~g~id~lv~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~iss~~~ 143 (259)
T PRK06125 79 --AGDIDILVNNAGAI-------PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG------VIVNVIGAAG 143 (259)
T ss_pred --hCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEecCccc
Confidence 48999999999976 35677889999999999999999999999999999877654 9999999877
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++++++++.|+.++||+ +|+|+||.+++
T Consensus 144 ~~~---~~~~~~y~ask~al~~~~~~la~e~~~~gi~-v~~i~PG~v~t 188 (259)
T PRK06125 144 ENP---DADYICGSAGNAALMAFTRALGGKSLDDGVR-VVGVNPGPVAT 188 (259)
T ss_pred cCC---CCCchHhHHHHHHHHHHHHHHHHHhCccCeE-EEEEecCcccc
Confidence 655 5778889999999999999999999999999 77999999874
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=234.10 Aligned_cols=190 Identities=16% Similarity=0.256 Sum_probs=145.9
Q ss_pred cccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCC---------CCccchhhhhhcCCC-----ceeEEEe
Q 026924 23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPE-----RLDVLQL 86 (231)
Q Consensus 23 ~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~---------~~~~~~~~~~~~~~~-----~v~~~~~ 86 (231)
..+++||++||||++ +|||+++|+.|+++|++ |++.++.+ +..+.........+. ++..+.+
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~--Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGAT--ILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA 80 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCE--EEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence 346789999999996 99999999999999997 77765431 111000000000011 1112233
Q ss_pred cCCCh------------------HHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhH
Q 026924 87 DLTVE------------------STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148 (231)
Q Consensus 87 Dls~~------------------~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 148 (231)
|+++. ++++++++++.+++|++|++|||||.... ...++.+.+.++|++.+++|+.+
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~g 155 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE-----ISKPLLETSRKGYLAALSTSSYS 155 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc-----cCCChhhCCHHHHHHHHHHHhHH
Confidence 33333 36899999999999999999999986420 14577889999999999999999
Q ss_pred HHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCcc-chhhhHHHHHHHHHHhhhhccc-cCCceeeeccC
Q 026924 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH-SYRASKAALNHDKICVSGVWSK-EGSSYMYSVAS 226 (231)
Q Consensus 149 ~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~p 226 (231)
+++++++++|+|+++ | ++++++|..+..+ .|++. .|+++|+|+.+|+++++.|+++ +||| +|+|+|
T Consensus 156 ~~~l~~a~~p~m~~~--G------~ii~iss~~~~~~---~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIr-Vn~V~P 223 (299)
T PRK06300 156 FVSLLSHFGPIMNPG--G------STISLTYLASMRA---VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIR-VNTISA 223 (299)
T ss_pred HHHHHHHHHHHhhcC--C------eEEEEeehhhcCc---CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeE-EEEEEe
Confidence 999999999999754 3 8999999888766 56654 7999999999999999999987 5999 779999
Q ss_pred CCCCC
Q 026924 227 RHCRY 231 (231)
Q Consensus 227 g~~~~ 231 (231)
|.+++
T Consensus 224 G~v~T 228 (299)
T PRK06300 224 GPLAS 228 (299)
T ss_pred CCccC
Confidence 99874
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=227.13 Aligned_cols=188 Identities=22% Similarity=0.282 Sum_probs=163.2
Q ss_pred cccCeEEEEecCCC-chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CC-CceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~-gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++|++|||||+| |||++++++|+++|++ |++.+|+.+..+...+.++. .+ .++.++++|++++++++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR--VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 45789999999985 9999999999999997 88889887766654444332 34 47889999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccC
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSAR 180 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~ 180 (231)
.+++|++|++|||+|.. ....+.+.+.++|++.+++|+.+++.+++.++|.|..++ .| +|++++|.
T Consensus 92 ~~~~g~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g------~iv~~ss~ 158 (262)
T PRK07831 92 VERLGRLDVLVNNAGLG-------GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG------VIVNNASV 158 (262)
T ss_pred HHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc------EEEEeCch
Confidence 99999999999999975 345677888999999999999999999999999998765 44 99999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+++|+|+++++++++.|++++||+ +|+|+||.+++
T Consensus 159 ~~~~~---~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~-v~~i~Pg~~~t 205 (262)
T PRK07831 159 LGWRA---QHGQAHYAAAKAGVMALTRCSALEAAEYGVR-INAVAPSIAMH 205 (262)
T ss_pred hhcCC---CCCCcchHHHHHHHHHHHHHHHHHhCccCeE-EEEEeeCCccC
Confidence 77665 5778899999999999999999999999999 77999999874
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=228.93 Aligned_cols=184 Identities=22% Similarity=0.240 Sum_probs=162.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++++++|||||+||||++++++|+++|++ |++.+|+++..+.+.+.. .++.++.+|++++++++++++++.+.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGAR--VAIGDLDEALAKETAAEL----GLVVGGPLDVTDPASFAAFLDAVEAD 75 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh----ccceEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 888888876555443322 15788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ...+.+.+.+.+++++++|+.+++.+++.++|.|.+++.| +||++||..+..
T Consensus 76 ~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~ 142 (273)
T PRK07825 76 LGPIDVLVNNAGVMP-------VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG------HVVNVASLAGKI 142 (273)
T ss_pred cCCCCEEEECCCcCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC------EEEEEcCccccC
Confidence 999999999999873 5567778889999999999999999999999999887765 999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++|+++++.|+.+.||+ +++|+||.+++
T Consensus 143 ~---~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~-v~~v~Pg~v~t 185 (273)
T PRK07825 143 P---VPGMATYCASKHAVVGFTDAARLELRGTGVH-VSVVLPSFVNT 185 (273)
T ss_pred C---CCCCcchHHHHHHHHHHHHHHHHHhhccCcE-EEEEeCCcCcc
Confidence 6 6888899999999999999999999999999 55999999864
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=227.06 Aligned_cols=184 Identities=21% Similarity=0.227 Sum_probs=158.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||++|||+++|++|+++|++ |++.+|+++..+...+.++.. .++.++++|++|+++++++++++.++++++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGAR--VVISSRNEENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 6999999999999999999999997 888899877666655544433 3688999999999999999999999999999
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhc-CCCCcccCceEEEEeccCccccCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
+||||+|.... ...++.+.+.++|.+.+++|+.+++.+.+.++|.|.+ ++.| +||++||..+..+
T Consensus 79 ~li~naG~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g------~iv~isS~~~~~~--- 144 (259)
T PRK08340 79 ALVWNAGNVRC-----EPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKG------VLVYLSSVSVKEP--- 144 (259)
T ss_pred EEEECCCCCCC-----CccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCC------EEEEEeCcccCCC---
Confidence 99999997420 1234667788899999999999999999999998864 3344 9999999887655
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 145 ~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~-v~~v~pG~v~t 186 (259)
T PRK08340 145 MPPLVLADVTRAGLVQLAKGVSRTYGGKGIR-AYTVLLGSFDT 186 (259)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCCCCEE-EEEeccCcccC
Confidence 6778899999999999999999999999999 77999999875
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=225.43 Aligned_cols=186 Identities=19% Similarity=0.240 Sum_probs=160.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|++|||||+++||++++++|+++|++ |+++.+ +.+..+.+.+.....+.++.++.+|++++++++++++++.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD--IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999997 666654 44444555555555577899999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|... ...+.+.+.++|++.+++|+.+++.+++++.++|.+++.+ ++||++||..+..+
T Consensus 80 ~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----g~ii~isS~~~~~~- 146 (256)
T PRK12743 80 RIDVLVNNAGAMT-------KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQG-----GRIINITSVHEHTP- 146 (256)
T ss_pred CCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----eEEEEEeeccccCC-
Confidence 9999999999763 4556778899999999999999999999999999765422 49999999877665
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.++.++||+ +|+|+||.+++
T Consensus 147 --~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~-v~~v~Pg~~~t 188 (256)
T PRK12743 147 --LPGASAYTAAKHALGGLTKAMALELVEHGIL-VNAVAPGAIAT 188 (256)
T ss_pred --CCCcchhHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEeCCccC
Confidence 6778899999999999999999999999999 67999999874
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=212.19 Aligned_cols=187 Identities=21% Similarity=0.257 Sum_probs=160.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++.|-|+|||||++|||+++|++|.+.|-. ||+++|+++.++...+. ...+....||+.|.++++++++++++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~--VIi~gR~e~~L~e~~~~----~p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNT--VIICGRNEERLAEAKAE----NPEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCE--EEEecCcHHHHHHHHhc----CcchheeeecccchhhHHHHHHHHHh
Confidence 4567899999999999999999999999996 99999999887765544 34678889999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.|+.+|++|||||+.... +..-.+-..++.++-+++|+.+++.+++.++|++.++..+ .||++||-.++
T Consensus 75 ~~P~lNvliNNAGIqr~~-----dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a------~IInVSSGLaf 143 (245)
T COG3967 75 EYPNLNVLINNAGIQRNE-----DLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEA------TIINVSSGLAF 143 (245)
T ss_pred hCCchheeeecccccchh-----hccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc------eEEEecccccc
Confidence 999999999999997511 1111234455567789999999999999999999998765 99999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ ....+.|+++|+|++.|+.+|+..+...+|.|+ =+.|-.||+
T Consensus 144 vP---m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVI-E~~PP~V~t 187 (245)
T COG3967 144 VP---MASTPVYCATKAAIHSYTLALREQLKDTSVEVI-ELAPPLVDT 187 (245)
T ss_pred Cc---ccccccchhhHHHHHHHHHHHHHHhhhcceEEE-EecCCceec
Confidence 77 778889999999999999999999999999966 777777764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=248.23 Aligned_cols=184 Identities=24% Similarity=0.359 Sum_probs=161.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
...||++|||||++|||+++|++|+++|++ |++.+|+.+..+.+.+. .+.++..+++|++|+++++++++++.++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 340 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDR--LLIIDRDAEGAKKLAEA---LGDEHLSVQADITDEAAVESAFAQIQAR 340 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hCCceeEEEccCCCHHHHHHHHHHHHHH
Confidence 457999999999999999999999999996 88889987655544432 2457788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||... +..++.+.+.++|++++++|+.++++++++++|+|.+ .| +||++||..+..
T Consensus 341 ~g~id~li~nAg~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g------~iv~isS~~~~~ 406 (520)
T PRK06484 341 WGRLDVLVNNAGIAE------VFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ--GG------VIVNLGSIASLL 406 (520)
T ss_pred cCCCCEEEECCCCcC------CCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc--CC------EEEEECchhhcC
Confidence 999999999999753 2356778899999999999999999999999999932 23 999999998887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 407 ~---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-vn~v~PG~v~t 449 (520)
T PRK06484 407 A---LPPRNAYCASKAAVTMLSRSLACEWAPAGIR-VNTVAPGYIET 449 (520)
T ss_pred C---CCCCchhHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEeCCccC
Confidence 6 6888899999999999999999999999999 77999999874
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=223.54 Aligned_cols=181 Identities=22% Similarity=0.302 Sum_probs=158.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+. ...+.++.++++|++++++++++++++.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~--v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGAT--VVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVE 71 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999997 8888887643 11245788999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|.. +...+.+.+.++|++.+++|+.+++.+++++.+.|.++..+ ++||++||..+.
T Consensus 72 ~~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~ 139 (252)
T PRK07856 72 RHGRLDVLVNNAGGS-------PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGG-----GSIVNIGSVSGR 139 (252)
T ss_pred HcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEEcccccC
Confidence 999999999999976 34566778889999999999999999999999999765321 399999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+++++|+++++.|+.++ |+ +|+|+||.+++
T Consensus 140 ~~---~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~-v~~i~Pg~v~t 182 (252)
T PRK07856 140 RP---SPGTAAYGAAKAGLLNLTRSLAVEWAPK-VR-VNAVVVGLVRT 182 (252)
T ss_pred CC---CCCCchhHHHHHHHHHHHHHHHHHhcCC-eE-EEEEEeccccC
Confidence 66 6788899999999999999999999988 98 77999999874
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=223.42 Aligned_cols=182 Identities=23% Similarity=0.359 Sum_probs=158.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++||++|||||++|||++++++|+++|++ |++.+|++... .+.++.++++|++++++++++++++.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGAR--VVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCE--EEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88888875431 134688899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||||.... ....+.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+.
T Consensus 74 ~~~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~ii~isS~~~~ 142 (260)
T PRK06523 74 RLGGVDILVHVLGGSSA-----PAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSG------VIIHVTSIQRR 142 (260)
T ss_pred HcCCCCEEEECCccccc-----CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------EEEEEeccccc
Confidence 99999999999996421 23456678889999999999999999999999999877654 89999998876
Q ss_pred cCCCCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+ ++..|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 143 ~~---~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~-v~~i~Pg~v~t 187 (260)
T PRK06523 143 LP---LPESTTAYAAAKAALSTYSKSLSKEVAPKGVR-VNTVSPGWIET 187 (260)
T ss_pred CC---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCcccC
Confidence 54 33 67889999999999999999999999999 66999999874
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=224.30 Aligned_cols=186 Identities=23% Similarity=0.336 Sum_probs=159.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++.+++....+ ..++.++++|++++++++++++++.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~--v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGAN--VVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIE 73 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 888888765432 23678899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCC--CCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 104 KYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+++++|++|||||...+.... ....+..+.+.++|++.+++|+.+++.+++++.++|.+++.+ +||++||..
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~ 147 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDG------VIVNMSSEA 147 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCc------EEEEEcccc
Confidence 999999999999975311100 001234567889999999999999999999999999876655 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+..+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.++
T Consensus 148 ~~~~---~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~-v~~v~pG~~~ 192 (266)
T PRK06171 148 GLEG---SEGQSCYAATKAALNSFTRSWAKELGKHNIR-VVGVAPGILE 192 (266)
T ss_pred ccCC---CCCCchhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeccccc
Confidence 8766 6788899999999999999999999999999 7799999885
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=248.89 Aligned_cols=190 Identities=19% Similarity=0.229 Sum_probs=169.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..++++++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.++..+.++.++++|++|+++++++++++.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAE--VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999997 88899988777766666555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|++|||||.. ....+.+.+.++|++++++|+.+++.++++++|.|.+++.+ ++||++||..+.
T Consensus 389 ~~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~-----g~iv~~sS~~~~ 456 (582)
T PRK05855 389 EHGVPDIVVNNAGIG-------MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG-----GHIVNVASAAAY 456 (582)
T ss_pred hcCCCcEEEECCccC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEECChhhc
Confidence 999999999999986 35667788999999999999999999999999999876532 499999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+++++++++.|++++||+ +|+|+||.|++
T Consensus 457 ~~---~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 500 (582)
T PRK05855 457 AP---SRSLPAYATSKAAVLMLSECLRAELAAAGIG-VTAICPGFVDT 500 (582)
T ss_pred cC---CCCCcHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEEeCCCcc
Confidence 66 6788899999999999999999999999999 66999999975
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=223.10 Aligned_cols=187 Identities=21% Similarity=0.294 Sum_probs=160.9
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++++|++|||||+++||++++++|+++|++ |++.+|+.+.. .+.+.+...+.++.++++|++++++++++++++.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~--v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAI--PVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCc--EEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999997 77788887655 4334444456688999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||+|... ...+.+.. ++|++.+++|+.+++.+.+.++|.+.+.. + +|+++||..+
T Consensus 79 ~~~~~id~vi~~ag~~~-------~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~------~iv~~ss~~~ 143 (258)
T PRK08628 79 AKFGRIDGLVNNAGVND-------GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-G------AIVNISSKTA 143 (258)
T ss_pred HhcCCCCEEEECCcccC-------CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-c------EEEEECCHHh
Confidence 99999999999999652 33344444 89999999999999999999999887543 3 9999999888
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+++++++++++.|+.++||+ +|+|.||.+++
T Consensus 144 ~~~---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~-v~~v~pg~v~t 188 (258)
T PRK08628 144 LTG---QGGTSGYAAAKGAQLALTREWAVALAKDGVR-VNAVIPAEVMT 188 (258)
T ss_pred ccC---CCCCchhHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCccCC
Confidence 766 5778899999999999999999999999999 77999999874
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=222.72 Aligned_cols=188 Identities=20% Similarity=0.246 Sum_probs=163.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++|++|||||+++||++++++|+++|++ ++++..|+.+..+.+.+..+..+.++.++.+|++|++++.++++++.+.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYD-IAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999997 33445777666555555555556789999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+||||+|.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++.| +||++||..+..+
T Consensus 81 ~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~~~~ 147 (250)
T PRK08063 81 GRLDVFVNNAASG-------VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGG------KIISLSSLGSIRY 147 (250)
T ss_pred CCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEEcchhhccC
Confidence 9999999999976 34567788899999999999999999999999999877654 9999999876655
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++|+++++.|+.+.||+ +|+|.||.++.
T Consensus 148 ---~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~-v~~i~pg~v~t 189 (250)
T PRK08063 148 ---LENYTTVGVSKAALEALTRYLAVELAPKGIA-VNAVSGGAVDT 189 (250)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhHhCeE-EEeEecCcccC
Confidence 5777899999999999999999999999999 67999999863
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=223.70 Aligned_cols=185 Identities=18% Similarity=0.227 Sum_probs=159.0
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.....+ ++.++.+|+++++++.++++++.+++|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT--LGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999996 8888998766555444333223 7899999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|... ......+.+.++|++++++|+.+++.+++.++|.|++++.+ +||+++|..+..+
T Consensus 79 id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~------~iv~isS~~~~~~-- 144 (257)
T PRK07024 79 PDVVIANAGISV------GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG------TLVGIASVAGVRG-- 144 (257)
T ss_pred CCEEEECCCcCC------CccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCC------EEEEEechhhcCC--
Confidence 999999999753 12222336778999999999999999999999999877655 9999999988776
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.++++++.|+.+.||+ +++|+||.+++
T Consensus 145 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 186 (257)
T PRK07024 145 -LPGAGAYSASKAAAIKYLESLRVELRPAGVR-VVTIAPGYIRT 186 (257)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhccCcE-EEEEecCCCcC
Confidence 6788899999999999999999999999999 55999999864
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=222.58 Aligned_cols=188 Identities=20% Similarity=0.254 Sum_probs=160.1
Q ss_pred cccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCC-----------CccchhhhhhcCCCceeEEEecCCCh
Q 026924 25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPN-----------GATGLLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 25 ~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~-----------~~~~~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
++++|++|||||++ |||.+++++|+++|++ |++.+|++. ....+.+.....+.++.++++|++++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGID--IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCc--EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 56889999999994 9999999999999997 888888721 11113333344466899999999999
Q ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCc
Q 026924 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV 171 (231)
Q Consensus 92 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (231)
+++.++++++.++++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+++.+.|.+...+
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----- 147 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYS-------THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG----- 147 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe-----
Confidence 999999999999999999999999976 34567788889999999999999999999999998765544
Q ss_pred eEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 172 ~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++|++||..+..+ .+++..|+++|+++++++++++.|+.+.||+ +++++||.+++
T Consensus 148 -~iv~~ss~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~i~Pg~~~t 202 (256)
T PRK12748 148 -RIINLTSGQSLGP---MPDELAYAATKGAIEAFTKSLAPELAEKGIT-VNAVNPGPTDT 202 (256)
T ss_pred -EEEEECCccccCC---CCCchHHHHHHHHHHHHHHHHHHHHHHhCeE-EEEEEeCcccC
Confidence 9999999876654 5677899999999999999999999999999 66999999864
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=224.41 Aligned_cols=187 Identities=17% Similarity=0.236 Sum_probs=162.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||.+++++|+++|++ |++++|+.+..+...+.....+.++.++++|++++++++++++++.+
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGAN--VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD 82 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88889987665554444444455778899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|++|||+|... ...+.+.+.++|++.+++|+.+++.++++++|.|++++ | +|+++||..+.
T Consensus 83 ~~~~iD~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g------~iv~iss~~~~ 148 (264)
T PRK07576 83 EFGPIDVLVSGAAGNF-------PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-A------SIIQISAPQAF 148 (264)
T ss_pred HcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C------EEEEECChhhc
Confidence 9999999999998652 34567788899999999999999999999999987543 3 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .+++..|+++|+++++|+++++.|+.++||+ +|+|+||.++
T Consensus 149 ~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~-v~~v~pg~~~ 191 (264)
T PRK07576 149 VP---MPMQAHVCAAKAGVDMLTRTLALEWGPEGIR-VNSIVPGPIA 191 (264)
T ss_pred cC---CCCccHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeccccc
Confidence 55 6788899999999999999999999999999 6699999875
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=231.12 Aligned_cols=189 Identities=22% Similarity=0.330 Sum_probs=157.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cC-CCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RF-PERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~-~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++||+++||||++|||+++|++|+++|++ |++++|+.+..+...+.+. .. +.++.++++|+++.++++++++++.
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~--Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAE--VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999996 8889998877666444332 22 3478899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|+||||||... ....+.+.+.|+..+++|+.+++.+++.++|.|.++. ++||++||..+
T Consensus 89 ~~~~~iD~li~nAG~~~--------~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~-------~riv~vsS~~~ 153 (313)
T PRK05854 89 AEGRPIHLLINNAGVMT--------PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR-------ARVTSQSSIAA 153 (313)
T ss_pred HhCCCccEEEECCcccc--------CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC-------CCeEEEechhh
Confidence 99999999999999763 1233567789999999999999999999999997652 39999999876
Q ss_pred ccCC---------CCCCCccchhhhHHHHHHHHHHhhhh--ccccCCceeeeccCCCCCC
Q 026924 183 SIGD---------NRLGGWHSYRASKAALNHDKICVSGV--WSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e--~~~~gi~~~~~v~pg~~~~ 231 (231)
..+. .+.+++..|+.||+|+..|++.++.+ +.++||+ +|+++||.|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~-v~~v~PG~v~T 212 (313)
T PRK05854 154 RRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGIT-SNLAHPGVAPT 212 (313)
T ss_pred cCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeE-EEEEecceecc
Confidence 5431 11345678999999999999999876 4467899 77999999874
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=223.22 Aligned_cols=186 Identities=20% Similarity=0.305 Sum_probs=162.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+++||+++|++|+++|++ |++.+|+.+..+.+.+.. +.++.++++|++++++++++++++.++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGAR--VVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVER 77 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 888899876655543322 346889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++.+ ++||++||..+..
T Consensus 78 ~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~~~~ 145 (257)
T PRK07067 78 FGGIDILFNNAALFD-------MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRG-----GKIINMASQAGRR 145 (257)
T ss_pred cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCC-----cEEEEeCCHHhCC
Confidence 999999999999763 4566778889999999999999999999999998765432 4999999987776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|++||++++.++++++.|+.++||+ +|+|.||.+++
T Consensus 146 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~i~pg~v~t 188 (257)
T PRK07067 146 G---EALVSHYCATKAAVISYTQSAALALIRHGIN-VNAIAPGVVDT 188 (257)
T ss_pred C---CCCCchhhhhHHHHHHHHHHHHHHhcccCeE-EEEEeeCcccc
Confidence 6 6778899999999999999999999999999 67999999863
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=222.62 Aligned_cols=187 Identities=18% Similarity=0.240 Sum_probs=164.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|++|||||+++||++++++|+++|++ |++++|+.+..+.+.+.....+.++.++.+|++++++++++++++.++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGAD--VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999996 888899876666655555544668899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... +..++.+.+.++|++.+++|+.+++.+++++.+.|.+.+ ++||++||..+..
T Consensus 80 ~g~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~ii~~sS~~~~~ 146 (258)
T PRK07890 80 FGRVDALVNNAFRVP------SMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-------GSIVMINSMVLRH 146 (258)
T ss_pred cCCccEEEECCccCC------CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-------CEEEEEechhhcc
Confidence 999999999999753 335667788999999999999999999999999987654 2999999988765
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .+++..|+++|++++.++++++.|++++||+ +|++.||.++
T Consensus 147 ~---~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~-v~~v~pg~v~ 188 (258)
T PRK07890 147 S---QPKYGAYKMAKGALLAASQSLATELGPQGIR-VNSVAPGYIW 188 (258)
T ss_pred C---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEeCCccC
Confidence 5 6788899999999999999999999999999 6799999985
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=222.34 Aligned_cols=186 Identities=23% Similarity=0.308 Sum_probs=158.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..++||++|||||+++||+++|++|+++|++ |++++++....+.+.+ ..+.++.++++|++++++++++++++.+
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~--v~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQ--VVLADLDRERGSKVAK---ALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHH---HcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 8888887654443322 2345788999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|...+ ...++.+.+.++|++.+++|+.+++.+++++.|+|.+.. ++||++||..+.
T Consensus 81 ~~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------g~ii~~sS~~~~ 148 (255)
T PRK05717 81 QFGRLDALVCNAAIADP-----HNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-------GAIVNLASTRAR 148 (255)
T ss_pred HhCCCCEEEECCCcccC-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------cEEEEEcchhhc
Confidence 99999999999997631 124567788899999999999999999999999987643 389999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+++++++++++.++.+. ++ +|+++||.+++
T Consensus 149 ~~---~~~~~~Y~~sKaa~~~~~~~la~~~~~~-i~-v~~i~Pg~i~t 191 (255)
T PRK05717 149 QS---EPDTEAYAASKGGLLALTHALAISLGPE-IR-VNAVSPGWIDA 191 (255)
T ss_pred CC---CCCCcchHHHHHHHHHHHHHHHHHhcCC-CE-EEEEecccCcC
Confidence 66 5778899999999999999999999874 98 67999999864
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=220.91 Aligned_cols=187 Identities=18% Similarity=0.236 Sum_probs=160.3
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEE-eecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||+++||++++++|+++|++ |++ .+++....+...+.....+.++..+.+|++|+++++++++++.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~--vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFK--VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE--EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 555 444444443334444444667888999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+++++.|.+++.+ +||++||..+..
T Consensus 79 ~~~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~ 145 (246)
T PRK12938 79 VGEIDVLVNNAGIT-------RDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWG------RIINISSVNGQK 145 (246)
T ss_pred hCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEEechhccC
Confidence 99999999999976 24567788999999999999999999999999999877654 999999988776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++++++++.|+.+.||+ +|+|.||.+++
T Consensus 146 ~---~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~-v~~i~pg~~~t 188 (246)
T PRK12938 146 G---QFGQTNYSTAKAGIHGFTMSLAQEVATKGVT-VNTVSPGYIGT 188 (246)
T ss_pred C---CCCChhHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEecccCC
Confidence 6 6788899999999999999999999999999 67999999874
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=222.08 Aligned_cols=186 Identities=20% Similarity=0.322 Sum_probs=161.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||++++++|+++|++ |++++|+....+ ..... .+.++.++++|++++++++++++++.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~--Vi~~~r~~~~~~-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGAR--VALLDRSEDVAE-VAAQL--LGGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHH-HHHHh--hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999996 888899765322 22222 134677899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.+ +||++||..+.
T Consensus 86 ~~~~~d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~ 152 (255)
T PRK06841 86 AFGRIDILVNSAGVA-------LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGG------KIVNLASQAGV 152 (255)
T ss_pred HhCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCc------eEEEEcchhhc
Confidence 999999999999976 34566778889999999999999999999999999876654 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 153 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~pg~v~t 196 (255)
T PRK06841 153 VA---LERHVAYCASKAGVVGMTKVLALEWGPYGIT-VNAISPTVVLT 196 (255)
T ss_pred cC---CCCCchHHHHHHHHHHHHHHHHHHHHhhCeE-EEEEEeCcCcC
Confidence 66 6788899999999999999999999999999 67999999874
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=225.78 Aligned_cols=194 Identities=17% Similarity=0.182 Sum_probs=164.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+...+.+...+.++.++++|++|.++++++++.+.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMK--LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999997 888899876666655444444567889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||... ...+.+.+.++|++.+++|+.+++.+++.++|.|.++........+++|++||..+..
T Consensus 81 ~g~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 153 (287)
T PRK06194 81 FGAVHLLFNNAGVGA-------GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL 153 (287)
T ss_pred cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence 999999999999863 4566778889999999999999999999999999876531111124899999988876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccc--cCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSK--EGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~--~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|++++.|+++++.|+.. .+|+ +|++.||.+++
T Consensus 154 ~---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~ir-v~~v~pg~i~t 198 (287)
T PRK06194 154 A---PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVG-ASVLCPYFVPT 198 (287)
T ss_pred C---CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeE-EEEEEeCcccC
Confidence 6 577889999999999999999999874 4688 67999999864
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=225.02 Aligned_cols=189 Identities=20% Similarity=0.250 Sum_probs=163.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
..++++|++|||||+++||.+++++|+++|++ |++++|+... .+.+.+..+..+.++.++.+|++++++++++++++
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~--V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGAD--IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 35778999999999999999999999999997 8888887543 33344444444668899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|++|||||... ...++.+.+.++|++.+++|+.+++.+++++++.|.+. + ++|++||..
T Consensus 119 ~~~~~~iD~lI~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g------~iV~isS~~ 184 (290)
T PRK06701 119 VRELGRLDILVNNAAFQY------PQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--S------AIINTGSIT 184 (290)
T ss_pred HHHcCCCCEEEECCcccC------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--C------eEEEEeccc
Confidence 999999999999999753 34567788899999999999999999999999998543 2 899999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+++++++++.++.++||+ +|+|+||.+++
T Consensus 185 ~~~~---~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIr-v~~i~pG~v~T 230 (290)
T PRK06701 185 GYEG---NETLIDYSATKGAIHAFTRSLAQSLVQKGIR-VNAVAPGPIWT 230 (290)
T ss_pred ccCC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCCCCC
Confidence 7766 5777899999999999999999999999999 66999999875
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=219.42 Aligned_cols=179 Identities=21% Similarity=0.245 Sum_probs=152.0
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||++++++|+++|++ |++.+|+.+... +..... .+.++.+|++++++++++++++.+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~---~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP--VIVSYRTHYPAI---DGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCchhHH---HHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 579999999999999999999999997 888888765322 222222 3678999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC--CCcccCceEEEEeccCccccC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~--~~~~~~~~~iv~iss~~~~~~ 185 (231)
+|++|||+|... .....+.+.++|++++++|+.+++.+.+.++|.|.+++ . ++||+++|..+..+
T Consensus 75 id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~------g~iv~~ss~~~~~~ 141 (236)
T PRK06483 75 LRAIIHNASDWL-------AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAA------SDIIHITDYVVEKG 141 (236)
T ss_pred ccEEEECCcccc-------CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCC------ceEEEEcchhhccC
Confidence 999999999753 22345667899999999999999999999999998754 3 38999999877655
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++|+++++.|+++ +|| +|+|+||.+.+
T Consensus 142 ---~~~~~~Y~asKaal~~l~~~~a~e~~~-~ir-vn~v~Pg~~~~ 182 (236)
T PRK06483 142 ---SDKHIAYAASKAALDNMTLSFAAKLAP-EVK-VNSIAPALILF 182 (236)
T ss_pred ---CCCCccHHHHHHHHHHHHHHHHHHHCC-CcE-EEEEccCceec
Confidence 677889999999999999999999988 499 88999998753
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=231.35 Aligned_cols=189 Identities=22% Similarity=0.289 Sum_probs=154.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-C-CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..|+++|||||++|||+++|++|+++|++ |++++|+++.++.+.++++. . +.++..+.+|+++ ++.+.++++.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~--Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~ 126 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLN--LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKE 126 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHH
Confidence 35899999999999999999999999997 88999998877776554432 2 2478889999985 23344445554
Q ss_pred HcC--CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 104 KYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 104 ~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++ ++|++|||||...+ ....+.+.+.+++++.+++|+.+++.+++.++|.|.+++.| +||++||..
T Consensus 127 ~~~~~didilVnnAG~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g------~IV~iSS~a 195 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYP-----YARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKG------AIINIGSGA 195 (320)
T ss_pred HhcCCCccEEEEecCcCCC-----CCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence 444 46799999997631 12356778889999999999999999999999999887765 999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+.... +.|+...|++||+++++|+++++.|++++||+ +++|+||.+++
T Consensus 196 ~~~~~-~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~-V~~v~PG~v~T 243 (320)
T PLN02780 196 AIVIP-SDPLYAVYAATKAYIDQFSRCLYVEYKKSGID-VQCQVPLYVAT 243 (320)
T ss_pred hccCC-CCccchHHHHHHHHHHHHHHHHHHHHhccCeE-EEEEeeCceec
Confidence 75421 14678899999999999999999999999999 66999999875
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=224.75 Aligned_cols=180 Identities=23% Similarity=0.297 Sum_probs=157.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
.+|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+ ..+.++.+|++|+++++++++++.+.+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~--Vi~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWR--VFATCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999997 8888998765443322 247788999999999999999997765
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|++|||||... ...+.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+..+
T Consensus 75 g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g------~iv~isS~~~~~~ 141 (277)
T PRK05993 75 GRLDALFNNGAYGQ-------PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQG------RIVQCSSILGLVP 141 (277)
T ss_pred CCccEEEECCCcCC-------CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCC------EEEEECChhhcCC
Confidence 68999999999763 4567778899999999999999999999999999887765 9999999887765
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++|+++++.|+.++||+ +++|+||.+++
T Consensus 142 ---~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~-v~~v~Pg~v~T 183 (277)
T PRK05993 142 ---MKYRGAYNASKFAIEGLSLTLRMELQGSGIH-VSLIEPGPIET 183 (277)
T ss_pred ---CCccchHHHHHHHHHHHHHHHHHHhhhhCCE-EEEEecCCccC
Confidence 6778899999999999999999999999999 66999999874
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=221.67 Aligned_cols=188 Identities=21% Similarity=0.266 Sum_probs=160.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+++||++++++|+++|++ |++++|+.. .+...+.....+.++.++++|++++++++++++++.++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~--Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGAN--LILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 888888764 22222333333567889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|++.+.+.+ ++|++||..+..
T Consensus 80 ~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~ 146 (263)
T PRK08226 80 EGRIDILVNNAGVC-------RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDG------RIVMMSSVTGDM 146 (263)
T ss_pred cCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEECcHHhcc
Confidence 99999999999976 34566777889999999999999999999999998776544 899999977643
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. +.+++..|+++|+++++++++++.|+.++||+ +|+|+||.+++
T Consensus 147 ~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~-v~~i~pg~v~t 190 (263)
T PRK08226 147 V--ADPGETAYALTKAAIVGLTKSLAVEYAQSGIR-VNAICPGYVRT 190 (263)
T ss_pred c--CCCCcchHHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCcccC
Confidence 2 15677899999999999999999999999999 77999999874
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=221.17 Aligned_cols=187 Identities=21% Similarity=0.272 Sum_probs=163.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|+++++++.++++++.+.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGAD--VLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999997 888999876666555554444668899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC-CCCcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||||... ...+.+.+.++|++++++|+.+++.+.+++.+.|.+. +. +++|++||..+.
T Consensus 85 ~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------g~iv~~sS~~~~ 151 (263)
T PRK07814 85 FGRLDIVVNNVGGTM-------PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGG------GSVINISSTMGR 151 (263)
T ss_pred cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCC------eEEEEEcccccc
Confidence 999999999999753 4556778899999999999999999999999999763 33 499999998887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++++++++++.|+.+ +++ +|+|+||.+++
T Consensus 152 ~~---~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~-v~~i~Pg~v~t 194 (263)
T PRK07814 152 LA---GRGFAAYGTAKAALAHYTRLAALDLCP-RIR-VNAIAPGSILT 194 (263)
T ss_pred CC---CCCCchhHHHHHHHHHHHHHHHHHHCC-Cce-EEEEEeCCCcC
Confidence 66 678889999999999999999999987 598 77999999863
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=217.99 Aligned_cols=192 Identities=19% Similarity=0.253 Sum_probs=156.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
|.+++|++|||||+++||++++++|+++|++ |++..+ +....+.+.. ..+.++.++++|++++++++++++++.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~--vv~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGAR--VVVNYHQSEDAAEALAD---ELGDRAIALQADVTDREQVQAMFATAT 75 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHH---HhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999997 666544 3332222222 224578899999999999999999999
Q ss_pred HHcCC-ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+.+++ +|++|||+|...... .....++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+ +|++++|..
T Consensus 76 ~~~g~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~iss~~ 148 (253)
T PRK08642 76 EHFGKPITTVVNNALADFSFD-GDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFG------RIINIGTNL 148 (253)
T ss_pred HHhCCCCeEEEECCCcccccc-ccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCe------EEEEECCcc
Confidence 98887 999999998642100 0013457788899999999999999999999999999776654 999999976
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|++++++++++++|++++||+ +|+|+||.+++
T Consensus 149 ~~~~---~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~-v~~i~pG~v~t 194 (253)
T PRK08642 149 FQNP---VVPYHDYTTAKAALLGLTRNLAAELGPYGIT-VNMVSGGLLRT 194 (253)
T ss_pred ccCC---CCCccchHHHHHHHHHHHHHHHHHhCccCeE-EEEEeecccCC
Confidence 5433 4567799999999999999999999999999 77999999874
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=222.23 Aligned_cols=178 Identities=29% Similarity=0.442 Sum_probs=155.3
Q ss_pred cCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-CCccE
Q 026924 35 GAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GSLNL 110 (231)
Q Consensus 35 Gas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~-g~id~ 110 (231)
|++ +|||+++|++|+++|++ |++++|+.+..+. +.++.++.+.+ .+++|++++++++++++++.+.+ |++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~--V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGAN--VILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEE--EEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCCCChHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 566 99999999999999997 9999999887544 44555555555 49999999999999999999999 99999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCC
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG 190 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~ 190 (231)
+|||+|...+.. ...++.+.+.++|++.+++|+.+++.++|++.|+|.+++ +||+++|..+... .+
T Consensus 77 lV~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------sii~iss~~~~~~---~~ 142 (241)
T PF13561_consen 77 LVNNAGISPPSN---VEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG--------SIINISSIAAQRP---MP 142 (241)
T ss_dssp EEEEEESCTGGG---TSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE--------EEEEEEEGGGTSB---ST
T ss_pred EEeccccccccc---CCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------Ccccccchhhccc---Cc
Confidence 999999764100 146788899999999999999999999999999887763 9999999887766 68
Q ss_pred CccchhhhHHHHHHHHHHhhhhccc-cCCceeeeccCCCCCC
Q 026924 191 GWHSYRASKAALNHDKICVSGVWSK-EGSSYMYSVASRHCRY 231 (231)
Q Consensus 191 ~~~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~pg~~~~ 231 (231)
++..|+++|+|+++|+++++.|+++ +||| +|+|+||.+++
T Consensus 143 ~~~~y~~sKaal~~l~r~lA~el~~~~gIr-VN~V~pG~i~t 183 (241)
T PF13561_consen 143 GYSAYSASKAALEGLTRSLAKELAPKKGIR-VNAVSPGPIET 183 (241)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGHGTEE-EEEEEESSBSS
T ss_pred cchhhHHHHHHHHHHHHHHHHHhccccCee-eeeecccceec
Confidence 8889999999999999999999999 9999 88999999974
|
... |
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=220.24 Aligned_cols=187 Identities=28% Similarity=0.386 Sum_probs=163.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+++++++|||||+++||++++++|+++|++ |++++|+.+..+.+.... ..+.++.++++|++|+++++++++.+.+
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGAR--LLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE 77 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh
Confidence 3567899999999999999999999999996 888899876666554444 3356899999999999999999999876
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++.++++|.+++.+ ++++++|..+.
T Consensus 78 -~~~id~lv~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~~ 143 (263)
T PRK09072 78 -MGGINVLINNAGVN-------HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSA------MVVNVGSTFGS 143 (263)
T ss_pred -cCCCCEEEECCCCC-------CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------EEEEecChhhC
Confidence 78999999999975 24566778889999999999999999999999999877654 89999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++.+++++++.|+.+.||+ +++|+||.+++
T Consensus 144 ~~---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~Pg~~~t 187 (263)
T PRK09072 144 IG---YPGYASYCASKFALRGFSEALRRELADTGVR-VLYLAPRATRT 187 (263)
T ss_pred cC---CCCccHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCcccc
Confidence 66 6778899999999999999999999999999 66999999874
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-32 Score=221.76 Aligned_cols=180 Identities=24% Similarity=0.273 Sum_probs=158.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|+++||||+||||++++++|+++|++ |++.+|+.+.++.+. ..++.++.+|++|+++++++++++.+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~l~~~~------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYT--VYGAARRVDKMEDLA------SLGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH------hCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999997 888889865443322 12478899999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||..+..+
T Consensus 74 ~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g------~iv~isS~~~~~~- 139 (273)
T PRK06182 74 RIDVLVNNAGYG-------SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG------RIINISSMGGKIY- 139 (273)
T ss_pred CCCEEEECCCcC-------CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcchhhcCC-
Confidence 999999999986 35667888999999999999999999999999999887655 9999999877655
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+....|+++|+++++++++++.|+.+.||+ +|+|.||.+++
T Consensus 140 --~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 181 (273)
T PRK06182 140 --TPLGAWYHATKFALEGFSDALRLEVAPFGID-VVVIEPGGIKT 181 (273)
T ss_pred --CCCccHhHHHHHHHHHHHHHHHHHhcccCCE-EEEEecCCccc
Confidence 5666789999999999999999999999999 66999999874
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=216.44 Aligned_cols=188 Identities=19% Similarity=0.251 Sum_probs=165.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++++++||||++++||++++++|+++|++ |++++|+.+..+...+.+...+.++.++.+|+++++++.++++++.++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVN--VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999996 888999877666555555555668999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ...+.+.+.++|++.+++|+.+++.+.+.+.+.+.+++.+ ++|+++|..+..
T Consensus 82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~ss~~~~~ 148 (239)
T PRK07666 82 LGSIDILINNAGISK-------FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSG------DIINISSTAGQK 148 (239)
T ss_pred cCCccEEEEcCcccc-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------EEEEEcchhhcc
Confidence 999999999999762 3456677889999999999999999999999999877654 899999988776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|++++.++++++.|+.+.|++ +++|.||.+++
T Consensus 149 ~---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~-v~~v~pg~v~t 191 (239)
T PRK07666 149 G---AAVTSAYSASKFGVLGLTESLMQEVRKHNIR-VTALTPSTVAT 191 (239)
T ss_pred C---CCCCcchHHHHHHHHHHHHHHHHHhhccCcE-EEEEecCcccC
Confidence 6 5677889999999999999999999999999 66999998863
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=220.71 Aligned_cols=184 Identities=17% Similarity=0.216 Sum_probs=164.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|+||++++++|+++|++ |++.+|+.+..+.+.+.+...+.++.++.+|+++++++.++++++.++++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR--LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999997 8888998877666655555556788999999999999999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||+|.. ....+.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+ +||++||..+..+
T Consensus 79 d~lI~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~vsS~~~~~~--- 142 (270)
T PRK05650 79 DVIVNNAGVA-------SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSG------RIVNIASMAGLMQ--- 142 (270)
T ss_pred CEEEECCCCC-------CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC------EEEEECChhhcCC---
Confidence 9999999986 34567788889999999999999999999999999876654 9999999988766
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++++++++.|+.+.||+ +++|+||.+++
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 184 (270)
T PRK05650 143 GPAMSSYNVAKAGVVALSETLLVELADDEIG-VHVVCPSFFQT 184 (270)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCcccc
Confidence 6788899999999999999999999999999 66999999874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=217.22 Aligned_cols=187 Identities=22% Similarity=0.310 Sum_probs=160.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++++|++|||||+++||++++++|+++|++ ++++.++.+ ..+.+.+.+.+.+.++.++++|++++++++++++++.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFA--VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE 78 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3568899999999999999999999999997 666666543 3334445555556789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|++|||+|... ..++.+.+.++|++++++|+.+++.++++++|.|... ++++++||..+
T Consensus 79 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--------~~iv~~ss~~~ 143 (245)
T PRK12937 79 TAFGRIDVLVNNAGVMP-------LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG--------GRIINLSTSVI 143 (245)
T ss_pred HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC--------cEEEEEeeccc
Confidence 99999999999999763 4566778889999999999999999999999998653 29999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|++++.++++++.|+.+.|++ +|+|+||.+++
T Consensus 144 ~~~---~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~-v~~i~pg~~~t 188 (245)
T PRK12937 144 ALP---LPGYGPYAASKAAVEGLVHVLANELRGRGIT-VNAVAPGPVAT 188 (245)
T ss_pred cCC---CCCCchhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeCCccC
Confidence 655 6788899999999999999999999999999 66999998864
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=240.23 Aligned_cols=188 Identities=24% Similarity=0.352 Sum_probs=163.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+ +.+.++.++++|++++++++++++++.++
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQ--VVVADRNVERARERAD---SLGPDHHALAMDVSDEAQIREGFEQLHRE 76 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HhCCceeEEEeccCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999997 8888998766554333 23567888999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||...+ ...++.+.+.++|++++++|+.+++.++++++|+|.+++.| ++||++||..+..
T Consensus 77 ~g~iD~li~nag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-----~~iv~isS~~~~~ 146 (520)
T PRK06484 77 FGRIDVLVNNAGVTDP-----TMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHG-----AAIVNVASGAGLV 146 (520)
T ss_pred hCCCCEEEECCCcCCC-----CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CeEEEECCcccCC
Confidence 9999999999997420 12456778899999999999999999999999999765543 3999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++|+++++.|+.+.||+ +|+|+||.|++
T Consensus 147 ~---~~~~~~Y~asKaal~~l~~~la~e~~~~~i~-v~~i~Pg~v~t 189 (520)
T PRK06484 147 A---LPKRTAYSASKAAVISLTRSLACEWAAKGIR-VNAVLPGYVRT 189 (520)
T ss_pred C---CCCCchHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEccCCcCc
Confidence 6 6788899999999999999999999999999 66999999874
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=216.98 Aligned_cols=187 Identities=18% Similarity=0.289 Sum_probs=160.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEee-cCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||+++||.+++++|+++|++ |++.. |+++..+.+.+.+...+.++.++++|+++++++.++++++.++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAK--VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999997 55544 4444444444444444568999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ...+.+.+.+++++.+++|+.+++.++++++|.|.+++.+ ++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~ 148 (247)
T PRK12935 82 FGKVDILVNNAGITR-------DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEG------RIISISSIIGQA 148 (247)
T ss_pred cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcchhhcC
Confidence 999999999999763 4556778889999999999999999999999999776554 999999988876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++++++++.|+.+.||+ ++.+.||.++.
T Consensus 149 ~---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~pg~v~t 191 (247)
T PRK12935 149 G---GFGQTNYSAAKAGMLGFTKSLALELAKTNVT-VNAICPGFIDT 191 (247)
T ss_pred C---CCCCcchHHHHHHHHHHHHHHHHHHHHcCcE-EEEEEeCCCcC
Confidence 6 5778899999999999999999999999999 56999999863
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=218.57 Aligned_cols=186 Identities=21% Similarity=0.293 Sum_probs=152.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC----CccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----GATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~----~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+++++|++|||||+++||+++|++|+++|++ |++.+++.. ..+.+.+.++..+.++.++++|++++++++++++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~--vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAK--AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCc--EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHH
Confidence 4578999999999999999999999999997 555544322 2222333334445688899999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe-c
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL-S 178 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i-s 178 (231)
++.++++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|.+.+ +++++ +
T Consensus 82 ~~~~~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~iv~~~s 146 (257)
T PRK12744 82 DAKAAFGRPDIAINTVGKVL-------KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG--------KIVTLVT 146 (257)
T ss_pred HHHHhhCCCCEEEECCcccC-------CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--------CEEEEec
Confidence 99999999999999999763 35567788899999999999999999999999987543 56655 5
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+.. .+++..|+++|+|+++|+++++.|+.++||+ +|+++||.+++
T Consensus 147 s~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~pg~v~t 194 (257)
T PRK12744 147 SLLGAF----TPFYSAYAGSKAPVEHFTRAASKEFGARGIS-VTAVGPGPMDT 194 (257)
T ss_pred chhccc----CCCcccchhhHHHHHHHHHHHHHHhCcCceE-EEEEecCcccc
Confidence 544432 4677899999999999999999999999999 67999999863
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=218.48 Aligned_cols=183 Identities=20% Similarity=0.258 Sum_probs=159.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCC-CceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFP-ERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~-~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|++|||||+++||.+++++|+++|++ |++++|+....+.+.+... ..+ .++.++.+|++++++++++++++.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR--VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999997 8888998776665544332 223 478999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCcccc
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~ 184 (231)
+++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++ .+ ++|+++|..+..
T Consensus 80 ~~id~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~------~iv~~ss~~~~~ 146 (259)
T PRK12384 80 GRVDLLVYNAGIAK-------AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQG------RIIQINSKSGKV 146 (259)
T ss_pred CCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCc------EEEEecCccccc
Confidence 99999999999763 45677888899999999999999999999999998765 34 999999987766
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+ .+....|+++|+|+++++++++.|++++||+ +|+|.||.+
T Consensus 147 ~---~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~-v~~v~pg~~ 187 (259)
T PRK12384 147 G---SKHNSGYSAAKFGGVGLTQSLALDLAEYGIT-VHSLMLGNL 187 (259)
T ss_pred C---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEecCCc
Confidence 5 5677899999999999999999999999999 779999964
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=217.59 Aligned_cols=185 Identities=21% Similarity=0.293 Sum_probs=163.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|+++||||+++||.+++++|++.|++ |++.+|+....+.+.+.+...+.++.++.+|+++++++.++++++.++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA--VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999996 8888888766665555555556689999999999999999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|++|||+|.. +..++.+.+.++|++.+++|+.+++.+++.+.+.|++.+.+ ++++++||..+..+
T Consensus 79 d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~~--- 143 (254)
T TIGR02415 79 DVMVNNAGVA-------PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG-----GKIINAASIAGHEG--- 143 (254)
T ss_pred CEEEECCCcC-------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC-----eEEEEecchhhcCC---
Confidence 9999999976 35567788999999999999999999999999999876532 49999999888776
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++++++++.|+.+.||+ +++++||.+++
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~Pg~i~t 185 (254)
T TIGR02415 144 NPILSAYSSTKFAVRGLTQTAAQELAPKGIT-VNAYCPGIVKT 185 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCcccC
Confidence 6788899999999999999999999999999 66999999864
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=217.08 Aligned_cols=183 Identities=25% Similarity=0.351 Sum_probs=158.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+++||++++++|+++|++ |++.+|+.+..+.+. ++.+.++.++++|+++.+++.++++++.+.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGAR--VAITGRDPASLEAAR---AELGESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCCHHHHHHHH---HHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999996 888888765443332 233567889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+.+ ++++++|..+..
T Consensus 78 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~i~~~S~~~~~ 142 (249)
T PRK06500 78 FGRLDAVFINAGVAK-------FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPA--------SIVLNGSINAHI 142 (249)
T ss_pred hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC--------EEEEEechHhcc
Confidence 999999999999752 45567889999999999999999999999999986532 888888887776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+++++++++++.|+.++||+ ++++.||.+++
T Consensus 143 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~i~pg~~~t 185 (249)
T PRK06500 143 G---MPNSSVYAASKAALLSLAKTLSGELLPRGIR-VNAVSPGPVQT 185 (249)
T ss_pred C---CCCccHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcCCC
Confidence 6 6778899999999999999999999999999 66999999874
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=218.79 Aligned_cols=186 Identities=22% Similarity=0.214 Sum_probs=154.2
Q ss_pred EEEEecCCCchhHHHHHHHHh----cCCccEEEEeecCCCCccchhhhhhc--CCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLE----KNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~----~G~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|||||++|||+++|++|++ .|++ |++++|+++..+.+.+.++. .+.++.++++|++++++++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSV--LVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcE--EEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 689999999999999999997 7996 88899998777766555443 244788999999999999999999988
Q ss_pred HcCCc----cEEEEccccCCCCCCCCCCc-ccch-hchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 104 KYGSL----NLLINASGILSIPNVLQPET-TLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 104 ~~g~i----d~lv~~ag~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
.++++ |+||||||... ... ...+ .+.++|++.+++|+.+++.+++.++|.|++++. ..++||++
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~------~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~----~~~~iv~i 149 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLG------DVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG----LNRTVVNI 149 (256)
T ss_pred ccccCCCceEEEEeCCcccC------ccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC----CCCEEEEE
Confidence 77653 69999999753 111 1222 346889999999999999999999999986521 11389999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+ .+++..|+++|+|+++|+++++.|+++.||+ +|+|+||.|++
T Consensus 150 sS~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~~~~~i~-v~~v~PG~v~T 199 (256)
T TIGR01500 150 SSLCAIQP---FKGWALYCAGKAARDMLFQVLALEEKNPNVR-VLNYAPGVLDT 199 (256)
T ss_pred CCHHhCCC---CCCchHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecCCcccc
Confidence 99887765 6788899999999999999999999999999 67999999975
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-32 Score=205.81 Aligned_cols=164 Identities=30% Similarity=0.494 Sum_probs=147.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC--CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
|++|||||++|||++++++|+++|++ +|++++|+ .+..+.+.+.+...+.++.++++|++++++++++++++.+.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~-~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGAR-VVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTE-EEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCce-EEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 79999999999999999999999887 68999998 4444555555555578999999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|.. ...++.+.+.++|++++++|+.+++.+.++++| ++. ++||++||..+..+
T Consensus 80 ~ld~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~------g~iv~~sS~~~~~~- 141 (167)
T PF00106_consen 80 PLDILINNAGIF-------SDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGG------GKIVNISSIAGVRG- 141 (167)
T ss_dssp SESEEEEECSCT-------TSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTT------EEEEEEEEGGGTSS-
T ss_pred cccccccccccc-------cccccccccchhhhhccccccceeeeeeehhee----ccc------cceEEecchhhccC-
Confidence 999999999987 477888999999999999999999999999999 223 49999999998887
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+++..|+++|+|+++|+++++.|+
T Consensus 142 --~~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 142 --SPGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp --STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999986
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=221.68 Aligned_cols=176 Identities=18% Similarity=0.272 Sum_probs=146.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|+++|||+ +|||+++|++|+ +|++ |++++|+.+..+.+.+.++..+.++.++++|++|+++++++++++ +++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~--Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKK--VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence 689999998 699999999996 7996 888899876665555444444568889999999999999999998 56899
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||||... ..++|++++++|+.+++.+++.+.|.|.+++ ++|+++|..+.....
T Consensus 77 id~li~nAG~~~--------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g--------~iv~isS~~~~~~~~ 134 (275)
T PRK06940 77 VTGLVHTAGVSP--------------SQASPEAILKVDLYGTALVLEEFGKVIAPGG--------AGVVIASQSGHRLPA 134 (275)
T ss_pred CCEEEECCCcCC--------------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCC--------CEEEEEecccccCcc
Confidence 999999999641 1256889999999999999999999997543 778899887764310
Q ss_pred ------------------------C---CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 ------------------------R---LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ------------------------~---~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|++||+|+++++++++.|++++||+ +|+|+||.|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIr-vn~i~PG~v~T 204 (275)
T PRK06940 135 LTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGAR-INSISPGIIST 204 (275)
T ss_pred cchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeE-EEEeccCcCcC
Confidence 0 0246789999999999999999999999999 77999999975
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=218.14 Aligned_cols=192 Identities=20% Similarity=0.278 Sum_probs=163.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+|+||.+++++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.+
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGAR--VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999996 88889987666665555555566888999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh-hhcCCCCcccCceEEEEeccCcc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL-LKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++++|++|||+|... ..+..+.+.+.|++.+++|+.+++.+++++.++ |.+++.+ ++|++||..+
T Consensus 86 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~------~~v~~sS~~~ 152 (259)
T PRK08213 86 RFGHVDILVNNAGATW-------GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYG------RIINVASVAG 152 (259)
T ss_pred HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCe------EEEEECChhh
Confidence 9999999999999753 345667788899999999999999999999998 6665544 9999999876
Q ss_pred ccCCCCC-CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRL-GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+. ++...|+++|+++++++++++.++.++||+ +|+|.||.+++
T Consensus 153 ~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~-v~~v~Pg~~~t 201 (259)
T PRK08213 153 LGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIR-VNAIAPGFFPT 201 (259)
T ss_pred ccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEE-EEEEecCcCCC
Confidence 6553211 345789999999999999999999999999 67999999864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=217.04 Aligned_cols=187 Identities=23% Similarity=0.304 Sum_probs=163.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++++|++|||||+|+||++++++|+++|++ |++.+|+.+..+...+... .+.++.++++|++|+++++++++++.+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~ 77 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGAR--VVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAA 77 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCe--EEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999996 8888998766555444433 356789999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|... ...+.+.+.++|++.+++|+.+++.+.+.+++.|++.+.+ +|+++||..+.
T Consensus 78 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~sS~~~~ 144 (252)
T PRK06138 78 RWGRLDVLVNNAGFGC-------GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGG------SIVNTASQLAL 144 (252)
T ss_pred HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCe------EEEEECChhhc
Confidence 9999999999999763 4556678889999999999999999999999999876654 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .++...|+.+|++++.++++++.|+.++|++ ++++.||.++
T Consensus 145 ~~---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~pg~~~ 187 (252)
T PRK06138 145 AG---GRGRAAYVASKGAIASLTRAMALDHATDGIR-VNAVAPGTID 187 (252)
T ss_pred cC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCeE-EEEEEECCcc
Confidence 66 5777899999999999999999999999999 5599999875
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=224.09 Aligned_cols=190 Identities=18% Similarity=0.212 Sum_probs=154.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++|++|||||++|||++++++|+++| ++ |++++|+.+..+.+.+.+...+.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWH--VIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999 85 8888998766665544443334578889999999999999999998888
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|++|||||+.. +.....+.+.++|++++++|+.+++.+++.++|.|++++.+ .++||++||..+...
T Consensus 80 ~~iD~lI~nAG~~~------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~----~g~IV~vsS~~~~~~ 149 (314)
T TIGR01289 80 RPLDALVCNAAVYF------PTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNK----DKRLIIVGSITGNTN 149 (314)
T ss_pred CCCCEEEECCCccc------cCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCC----CCeEEEEecCccccc
Confidence 99999999999753 22233456788999999999999999999999999875310 139999999876421
Q ss_pred C------------------------------CCCCCccchhhhHHHHHHHHHHhhhhcc-ccCCceeeeccCCCC
Q 026924 186 D------------------------------NRLGGWHSYRASKAALNHDKICVSGVWS-KEGSSYMYSVASRHC 229 (231)
Q Consensus 186 ~------------------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~~~~~v~pg~~ 229 (231)
. .+..++..|++||+|+..+++.+++++. +.||+ +++|+||.|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~-v~~v~PG~v 223 (314)
T TIGR01289 150 TLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGIT-FASLYPGCI 223 (314)
T ss_pred cCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeE-EEEecCCcc
Confidence 0 0123456799999999999999999985 46999 669999987
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=215.46 Aligned_cols=186 Identities=19% Similarity=0.262 Sum_probs=163.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||+++||++++++|+++|++ |++++|+.+..+.+.+..+..+.++.++.+|+++++++.++++++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWD--LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999996 88889987665555555555566899999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+.+.|.+.+.+ ++|++||..+..+
T Consensus 83 ~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~- 148 (241)
T PRK07454 83 CPDVLINNAGMAY-------TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGG------LIINVSSIAARNA- 148 (241)
T ss_pred CCCEEEECCCccC-------CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCc------EEEEEccHHhCcC-
Confidence 9999999999763 4566778889999999999999999999999999876554 9999999877655
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|++++.++++++.|++++|++ +|+|.||.+++
T Consensus 149 --~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~-v~~i~pg~i~t 190 (241)
T PRK07454 149 --FPQWGAYCVSKAALAAFTKCLAEEERSHGIR-VCTITLGAVNT 190 (241)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHhhhhCCE-EEEEecCcccC
Confidence 6778899999999999999999999999999 66999999864
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=215.80 Aligned_cols=188 Identities=24% Similarity=0.338 Sum_probs=164.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+|+||.+++++|+++|++ |++++|+....+.+...+.. +.++.++.+|++++++++++++++.++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGAR--VVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 568899999999999999999999999997 99999998766655444433 567899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ...++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.+ ++|++||..+..
T Consensus 79 ~~~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~ 146 (251)
T PRK07231 79 FGSVDILVNNAGTTH------RNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGG------AIVNVASTAGLR 146 (251)
T ss_pred hCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhcC
Confidence 999999999999753 34557788899999999999999999999999999876554 999999988766
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+.+|++++.+++.++.++.+.||+ ++++.||.+++
T Consensus 147 ~---~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~-v~~i~pg~~~t 189 (251)
T PRK07231 147 P---RPGLGWYNASKGAVITLTKALAAELGPDKIR-VNAVAPVVVET 189 (251)
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEECccCC
Confidence 5 6778899999999999999999999999999 66999998864
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=219.49 Aligned_cols=183 Identities=22% Similarity=0.311 Sum_probs=160.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+ ..+.++.++.+|+++++++.++++++.+.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~l~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARADFEA---LHPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE--EEEEeCCHHHHHHHHh---hcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999997 8888998755443322 2345788999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|.. ...+..+.+.++|++.+++|+.+++.++++++|.|++.+.+ +||++||..+..+
T Consensus 78 ~~d~vv~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~iSS~~~~~~- 143 (277)
T PRK06180 78 PIDVLVNNAGYG-------HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRG------HIVNITSMGGLIT- 143 (277)
T ss_pred CCCEEEECCCcc-------CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCC------EEEEEecccccCC-
Confidence 999999999976 34567788889999999999999999999999999877655 9999999988766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++++++++.|+.+.|++ +++|.||.+++
T Consensus 144 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~i~Pg~v~t 185 (277)
T PRK06180 144 --MPGIGYYCGSKFALEGISESLAKEVAPFGIH-VTAVEPGSFRT 185 (277)
T ss_pred --CCCcchhHHHHHHHHHHHHHHHHHhhhhCcE-EEEEecCCccc
Confidence 6788899999999999999999999999999 66999998853
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-31 Score=215.90 Aligned_cols=196 Identities=23% Similarity=0.334 Sum_probs=166.6
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..++++|++|||||+|+||++++++|+++|++ |++++|+.+..+.+...+...+.++.++.+|+++++++.++++++.
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLAQAGAK--VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE 81 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999996 8889998777666655544445678899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC--cccCceEEEEeccC
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG--IERDVAVVANLSAR 180 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~--~~~~~~~iv~iss~ 180 (231)
++++++|++|||+|... ..++.+.+.++|++++++|+.+++.++++++|.|.++..+ .....+++|+++|.
T Consensus 82 ~~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~ 154 (258)
T PRK06949 82 TEAGTIDILVNNSGVST-------TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASV 154 (258)
T ss_pred HhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcc
Confidence 99999999999999753 4556677888999999999999999999999998766431 11123599999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+...+|+++|++++.++++++.++.+.||+ +|+|+||.+++
T Consensus 155 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~-v~~v~pG~v~t 201 (258)
T PRK06949 155 AGLRV---LPQIGLYCMSKAAVVHMTRAMALEWGRHGIN-VNAICPGYIDT 201 (258)
T ss_pred cccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCeE-EEEEeeCCCcC
Confidence 77655 5677899999999999999999999999999 66999999864
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-31 Score=214.53 Aligned_cols=186 Identities=25% Similarity=0.292 Sum_probs=165.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+..+|.|+|||+.+|.|+.+|++|.++|+. |+..+-+++..+.+..+.. ..+...++.|++++++++++.+.+++.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~--V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFR--VFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCE--EEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999996 8887777777676655543 568889999999999999999999986
Q ss_pred c--CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 105 Y--GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~--g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
. ..+-+||||||+.. ..++.+-.+.+++++++++|+.|++.++++++|++++++ ||||+++|+.|
T Consensus 102 l~~~gLwglVNNAGi~~------~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-------GRvVnvsS~~G 168 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISG------FLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-------GRVVNVSSVLG 168 (322)
T ss_pred cccccceeEEecccccc------ccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-------CeEEEeccccc
Confidence 5 35999999999875 577888899999999999999999999999999998876 59999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
-.. .|..++|++||+|++.|+.++++|+.+.||.|. .|-||..++
T Consensus 169 R~~---~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~Vs-iiePG~f~T 213 (322)
T KOG1610|consen 169 RVA---LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVS-IIEPGFFKT 213 (322)
T ss_pred Ccc---CcccccchhhHHHHHHHHHHHHHHHHhcCcEEE-EeccCcccc
Confidence 766 788999999999999999999999999999955 999997653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-31 Score=217.35 Aligned_cols=178 Identities=23% Similarity=0.342 Sum_probs=158.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++++++||||+|+||++++++|+++|++ |++.+|+.+..+. ..++.++++|++|+++++++++++.++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR--VFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 4679999999999999999999999997 8888998654332 23678899999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+||||+|... ...+.+.+.+++++.+++|+.+++.+++.++|.|.+++.+ +||++||..+..+
T Consensus 73 ~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~- 138 (270)
T PRK06179 73 RIDVLVNNAGVGL-------AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG------RIINISSVLGFLP- 138 (270)
T ss_pred CCCEEEECCCCCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEECCccccCC-
Confidence 9999999999863 4567778899999999999999999999999999887765 9999999887766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.|+++.||+ +++|.||.+++
T Consensus 139 --~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~-v~~v~pg~~~t 180 (270)
T PRK06179 139 --APYMALYAASKHAVEGYSESLDHEVRQFGIR-VSLVEPAYTKT 180 (270)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEeCCCccc
Confidence 6778899999999999999999999999999 56999998863
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=213.97 Aligned_cols=189 Identities=23% Similarity=0.282 Sum_probs=161.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCC--hHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTV--ESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~--~~~v~~~~~~~ 101 (231)
.+++|+++||||+++||++++++|+++|++ |++.+|+++..+.+.+.+... +.++.++++|+++ .+++.++++++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGAT--VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCE--EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence 467899999999999999999999999996 888999987766655444332 3467888999976 56899999999
Q ss_pred HHHc-CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 102 ~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
.+.+ +++|++|||||... +..++.+.+.++|++.+++|+.+++.++++++|.|.+.+.+ ++++++|.
T Consensus 81 ~~~~~~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~ss~ 148 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFY------ALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDA------SVIFVGES 148 (239)
T ss_pred HHHhCCCCCEEEEeccccc------cCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCC------EEEEEecc
Confidence 9888 89999999999753 34567788899999999999999999999999999876654 99999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhcccc-CCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKE-GSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~-gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||++++.|+++++.|+.++ +|+ +|+|.||.+++
T Consensus 149 ~~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~-v~~v~pG~v~t 196 (239)
T PRK08703 149 HGETP---KAYWGGFGASKAALNYLCKVAADEWERFGNLR-ANVLVPGPINS 196 (239)
T ss_pred ccccC---CCCccchHHhHHHHHHHHHHHHHHhccCCCeE-EEEEecCcccC
Confidence 77665 6777899999999999999999999987 699 67999999874
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-31 Score=213.88 Aligned_cols=180 Identities=22% Similarity=0.323 Sum_probs=159.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+++||++++++|+++|++ |++.+|+. ....+.++.++++|++++++++++++++.+
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~--v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAK--VIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999997 88888875 112255788999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|++++.+ +||++||..+.
T Consensus 73 ~~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~~ss~~~~ 139 (252)
T PRK08220 73 ETGPLDVLVNAAGIL-------RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSG------AIVTVGSNAAH 139 (252)
T ss_pred HcCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECCchhc
Confidence 999999999999976 34567778889999999999999999999999999877655 99999998766
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++.++++++.|++++||+ +|++.||.+++
T Consensus 140 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~i~pg~v~t 183 (252)
T PRK08220 140 VP---RIGMAAYGASKAALTSLAKCVGLELAPYGVR-CNVVSPGSTDT 183 (252)
T ss_pred cC---CCCCchhHHHHHHHHHHHHHHHHHhhHhCeE-EEEEecCcCcc
Confidence 55 5777899999999999999999999999999 67999998863
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=214.20 Aligned_cols=187 Identities=18% Similarity=0.234 Sum_probs=164.3
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++|++|||||+++||++++++|+++|++ |++.+|+.+..+.+.+.....+.++.++++|++++++++++++++.+++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAK--VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999996 8888898766665555555456689999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|++|||+|.. ....+.+.+.++|++.+++|+.+++.+++.+++.|.+++.+ ++++++|..+..+
T Consensus 79 ~~~d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~iss~~~~~~ 145 (250)
T TIGR03206 79 GPVDVLVNNAGWD-------KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAG------RIVNIASDAARVG 145 (250)
T ss_pred CCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe------EEEEECchhhccC
Confidence 9999999999975 34566778888999999999999999999999999876654 8999999887766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+|+++++++++.++.+.+++ ++++.||.+++
T Consensus 146 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~-v~~v~pg~~~~ 187 (250)
T TIGR03206 146 ---SSGEAVYAACKGGLVAFSKTMAREHARHGIT-VNVVCPGPTDT 187 (250)
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHhHhCcE-EEEEecCcccc
Confidence 5778899999999999999999999999999 66999998863
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=215.23 Aligned_cols=185 Identities=15% Similarity=0.172 Sum_probs=153.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCC-ccchhhhhhcCC-CceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNG-ATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~-~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|++|||||++|||+++|++|+++| ++ |++++|+.+. .+.+.+.+...+ .++.++++|++|+++++++++++.+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~--V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPAR--VVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCe--EEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 57899999999999999999999985 75 8888998875 555544444433 3789999999999999999999886
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||+|... +. .....+.+..++.+++|+.+++.+++.++|.|.+++.+ +||++||..+.
T Consensus 85 -~g~id~li~~ag~~~------~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~------~iv~isS~~g~ 150 (253)
T PRK07904 85 -GGDVDVAIVAFGLLG------DA-EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG------QIIAMSSVAGE 150 (253)
T ss_pred -cCCCCEEEEeeecCC------ch-hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc------eEEEEechhhc
Confidence 589999999999753 11 11112334455789999999999999999999987765 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+++.+|+++++.|+.++||+ +++|+||.+++
T Consensus 151 ~~---~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~-v~~v~Pg~v~t 194 (253)
T PRK07904 151 RV---RRSNFVYGSTKAGLDGFYLGLGEALREYGVR-VLVVRPGQVRT 194 (253)
T ss_pred CC---CCCCcchHHHHHHHHHHHHHHHHHHhhcCCE-EEEEeeCceec
Confidence 54 5677789999999999999999999999999 66999999864
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=214.88 Aligned_cols=187 Identities=21% Similarity=0.242 Sum_probs=164.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+|+||++++++|+++|++ |++.+|+++..+.+.+.....+.++.++++|++++++++++++++.++
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAA--VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 888899887766665555555668889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhh-hcCCCCcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL-KVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||+|... ...+.+.+.++|++.+++|+.+++.+++.+++.+ ++.+.+ +||++||..+.
T Consensus 82 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~------~iv~~ss~~~~ 148 (262)
T PRK13394 82 FGSVDILVSNAGIQI-------VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGG------VVIYMGSVHSH 148 (262)
T ss_pred cCCCCEEEECCccCC-------CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCc------EEEEEcchhhc
Confidence 999999999999762 4556677888999999999999999999999999 555443 99999998776
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .++...|+++|++++++++.++.++.+.+|+ +|++.||.++
T Consensus 149 ~~---~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~-v~~v~pg~v~ 191 (262)
T PRK13394 149 EA---SPLKSAYVTAKHGLLGLARVLAKEGAKHNVR-SHVVCPGFVR 191 (262)
T ss_pred CC---CCCCcccHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCccc
Confidence 65 5677899999999999999999999999999 6699999886
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=215.42 Aligned_cols=182 Identities=21% Similarity=0.206 Sum_probs=159.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH-cCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-YGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~-~g~ 107 (231)
|++|||||+++||++++++|+++|++ |++.+|+.+..+.+..... +.++.++++|+++++++.++++.+.++ +++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWR--VGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999996 8888998766555444332 457999999999999999999998776 789
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||||... ...+.+.+.+++++.+++|+.+++.+++.+.+.|+..+.+ +||++||..+..+
T Consensus 78 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~-- 142 (260)
T PRK08267 78 LDVLFNNAGILR-------GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGA------RVINTSSASAIYG-- 142 (260)
T ss_pred CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEeCchhhCcC--
Confidence 999999999863 4566778889999999999999999999999999877654 9999999888777
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+.+|+++++++++++.++.++||+ +|+|.||.+++
T Consensus 143 -~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~-v~~i~pg~~~t 184 (260)
T PRK08267 143 -QPGLAVYSATKFAVRGLTEALDLEWRRHGIR-VADVMPLFVDT 184 (260)
T ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCCcCC
Confidence 6778899999999999999999999999999 66999999863
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=217.09 Aligned_cols=185 Identities=23% Similarity=0.307 Sum_probs=158.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC-ceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|+++||||++|||++++++|+++|++ |++++|+.+..+...+.+...+. .+.++++|++++++++++++++.+.+++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE--LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999999997 88889987665554444333333 4566899999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|.. ....+.+.+.++|++.+++|+.+++.++++++|.|.+++.+ ++||++||..+..+
T Consensus 79 id~lv~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----g~ii~isS~~~~~~-- 144 (272)
T PRK07832 79 MDVVMNIAGIS-------AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG-----GHLVNVSSAAGLVA-- 144 (272)
T ss_pred CCEEEECCCCC-------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-----cEEEEEccccccCC--
Confidence 99999999976 24566788999999999999999999999999999765322 39999999887665
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++.+++++++.|+.++||+ +|+|+||.+++
T Consensus 145 -~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~-v~~v~Pg~v~t 186 (272)
T PRK07832 145 -LPWHAAYSASKFGLRGLSEVLRFDLARHGIG-VSVVVPGAVKT 186 (272)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCcccC
Confidence 6788899999999999999999999999999 66999999874
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=217.41 Aligned_cols=183 Identities=25% Similarity=0.330 Sum_probs=160.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||+|+||++++++|+++|++ |++.+|+.+..+.+.+ ..+.++..+++|++++++++++++++.+.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDR--VVATARDTATLADLAE---KYGDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---hccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999996 8888998665444332 2345788899999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ ++|++||..+..+
T Consensus 77 ~~d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~vsS~~~~~~- 142 (275)
T PRK08263 77 RLDIVVNNAGYG-------LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG------HIIQISSIGGISA- 142 (275)
T ss_pred CCCEEEECCCCc-------cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEcChhhcCC-
Confidence 999999999976 35567788899999999999999999999999999877655 9999999887766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.+++.++.|+++.||+ +|++.||.+++
T Consensus 143 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~-v~~v~Pg~~~t 184 (275)
T PRK08263 143 --FPMSGIYHASKWALEGMSEALAQEVAEFGIK-VTLVEPGGYST 184 (275)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHhhhhCcE-EEEEecCCccC
Confidence 6778899999999999999999999999999 66999998864
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=213.17 Aligned_cols=188 Identities=22% Similarity=0.288 Sum_probs=164.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|++|||||+|+||++++++|+++|++ |++++|+.+..+...+.++..+.++.++++|++++++++++++++.++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGAT--VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999997 888888876666655555444668999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ...+.+.+.++|++.++.|+.+++.+++.+.+.|.+++.| ++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~ 148 (250)
T PRK12939 82 LGGLDGLVNNAGITN-------SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRG------RIVNLASDTALW 148 (250)
T ss_pred cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEECchhhcc
Confidence 999999999999763 4566778889999999999999999999999999886654 999999987766
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|++++.+++.++.++.+++++ +++|.||.+++
T Consensus 149 ~---~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~-v~~v~pg~v~t 191 (250)
T PRK12939 149 G---APKLGAYVASKGAVIGMTRSLARELGGRGIT-VNAIAPGLTAT 191 (250)
T ss_pred C---CCCcchHHHHHHHHHHHHHHHHHHHhhhCEE-EEEEEECCCCC
Confidence 5 5777899999999999999999999999999 66999999864
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=216.40 Aligned_cols=190 Identities=18% Similarity=0.246 Sum_probs=163.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+++++|++||||++|+||++++++|+++|++ |++++|+.+..+...+..... +.++.++++|++++++++++++++
T Consensus 3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAA--VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999997 888899876555544333322 357889999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|++|||+|... ...++.+.+.++|++++++|+.+++.+++++.+.|.+.+.+ +|+++||..
T Consensus 81 ~~~~~~~d~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~~sS~~ 148 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGSE------TIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGG------SFVGISSIA 148 (276)
T ss_pred HHHcCCCCEEEECCCccc------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence 999999999999999653 23456778888999999999999999999999999776554 999999987
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++..+|+++|++++.+++.++.++.+.+|+ +|+|.||.+++
T Consensus 149 ~~~~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~-v~~i~Pg~v~t 194 (276)
T PRK05875 149 ASNT---HRWFGAYGVTKSAVDHLMKLAADELGPSWVR-VNSIRPGLIRT 194 (276)
T ss_pred hcCC---CCCCcchHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCccCC
Confidence 7655 5677899999999999999999999999999 67999999874
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=212.20 Aligned_cols=188 Identities=19% Similarity=0.202 Sum_probs=160.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+|+||++++++|+++|++ |++.+|+.+..+.+.+.....+.++.++.+|+++.++++++++++.++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGAS--VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 888899876655554444443457788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||+|..... ...++.+.+.++|++.+++|+.+++.++++++|+|.+.+.+ +||++||..+..
T Consensus 81 ~~~id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~ 150 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGM----KLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG------AIVNQSSTAAWL 150 (250)
T ss_pred hCCCCEEEECCCCcCCC----CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc------EEEEEecccccC
Confidence 99999999999975310 23456778889999999999999999999999999876654 999999977542
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+...|+++|++++.++++++.++.+.|++ +++++||.+++
T Consensus 151 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~pg~~~t 190 (250)
T PRK07774 151 ------YSNFYGLAKVGLNGLTQQLARELGGMNIR-VNAIAPGPIDT 190 (250)
T ss_pred ------CccccHHHHHHHHHHHHHHHHHhCccCeE-EEEEecCcccC
Confidence 34589999999999999999999999999 66999999864
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=212.38 Aligned_cols=189 Identities=22% Similarity=0.307 Sum_probs=157.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|++|||||++|||.+++++|+++|++ |++. .|+.+..+.+.+.+...+.++.+++||++++++++++++++.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWS--VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999997 6554 4555555555555554566899999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|... +..++.+.+.++|++.+++|+.+++.+++++++.+..++.+ +.+++|+++|..+..+
T Consensus 80 ~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~ii~~sS~~~~~~- 149 (248)
T PRK06947 80 RLDALVNNAGIVA------PSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGG---RGGAIVNVSSIASRLG- 149 (248)
T ss_pred CCCEEEECCccCC------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC---CCcEEEEECchhhcCC-
Confidence 9999999999764 34566788889999999999999999999999988654311 1248999999887766
Q ss_pred CCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+..|+++|+++++++++++.++.+.||+ +++|.||.+++
T Consensus 150 --~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~-v~~i~Pg~v~t 192 (248)
T PRK06947 150 --SPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR-VNAVRPGLIET 192 (248)
T ss_pred --CCCCCcccHhhHHHHHHHHHHHHHHhhhhCcE-EEEEeccCccc
Confidence 34 35689999999999999999999999999 66999999975
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=220.96 Aligned_cols=183 Identities=19% Similarity=0.251 Sum_probs=151.8
Q ss_pred EEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 32 LVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 32 LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
|||||++|||++++++|+++| ++ |++.+|+.+..+.+.+.+...+.++.++++|+++.++++++++++.+.++++|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWH--VVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 699999999999999999999 86 888899876665554444333457888999999999999999999988899999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC--CCcccCceEEEEeccCccccCC--
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSARVGSIGD-- 186 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~--~~~~~~~~~iv~iss~~~~~~~-- 186 (231)
||||||+.. +..+..+.+.++|++.+++|+.+++.+++.++|.|.+++ .| +||++||..+..+.
T Consensus 79 lInnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g------~IV~vsS~~~~~~~~~ 146 (308)
T PLN00015 79 LVCNAAVYL------PTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSK------RLIIVGSITGNTNTLA 146 (308)
T ss_pred EEECCCcCC------CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCC------EEEEEecccccccccc
Confidence 999999753 223456778899999999999999999999999998764 33 99999998764210
Q ss_pred ------------------------------CCCCCccchhhhHHHHHHHHHHhhhhccc-cCCceeeeccCCCC
Q 026924 187 ------------------------------NRLGGWHSYRASKAALNHDKICVSGVWSK-EGSSYMYSVASRHC 229 (231)
Q Consensus 187 ------------------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~pg~~ 229 (231)
...+++..|++||+|+..+++.+++++.+ .||+ +|+|+||.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~-v~~v~PG~v 219 (308)
T PLN00015 147 GNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGIT-FASLYPGCI 219 (308)
T ss_pred ccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeE-EEEecCCcc
Confidence 00134567999999999999999999975 6999 679999998
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=213.03 Aligned_cols=186 Identities=24% Similarity=0.337 Sum_probs=165.9
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.......+.++..+.+|++++++++++++++.+++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAK--VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999997 8888998877666655555556789999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|++|||+|... .....+.+.+++++.+++|+.+++.+++.+++.|.+.+.+ +||++||..+..+
T Consensus 80 ~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~iss~~~~~~ 146 (258)
T PRK12429 80 GGVDILVNNAGIQH-------VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG------RIINMASVHGLVG 146 (258)
T ss_pred CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe------EEEEEcchhhccC
Confidence 99999999999763 4566778888999999999999999999999999887654 9999999887766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++.+++.++.|+.+.+|+ ++++.||.++
T Consensus 147 ---~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~-v~~~~pg~v~ 187 (258)
T PRK12429 147 ---SAGKAAYVSAKHGLIGLTKVVALEGATHGVT-VNAICPGYVD 187 (258)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCCCc
Confidence 6788899999999999999999999999999 6699999986
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-31 Score=221.98 Aligned_cols=186 Identities=22% Similarity=0.304 Sum_probs=154.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|++|||||++|||++++++|+++|++ |++++|+.+..+...+.. .++.++++|++|.++++++++++.+
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~--Vv~~~R~~~~~~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAH--VIVPARRPDVAREALAGI----DGVEVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh----hhCeEEEccCCCHHHHHHHHHHHHh
Confidence 4678999999999999999999999999997 888899876555433322 1378899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|+||||||... + ....+.++|+..+++|+.+++.+++.++|.|.+++.+ +||++||..+.
T Consensus 96 ~~~~iD~li~nAg~~~------~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~------~iV~vSS~~~~ 160 (315)
T PRK06196 96 SGRRIDILINNAGVMA------C---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGA------RVVALSSAGHR 160 (315)
T ss_pred cCCCCCEEEECCCCCC------C---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------eEEEECCHHhc
Confidence 9999999999999753 1 1245567899999999999999999999999877544 99999997543
Q ss_pred cCC---------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGD---------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+. .+.+++..|++||++++.+++.++.++.++||+ +|+|+||.+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~-v~~v~PG~v~t 216 (315)
T PRK06196 161 RSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVR-AFSVHPGGILT 216 (315)
T ss_pred cCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EEEeeCCcccC
Confidence 221 123455689999999999999999999999999 66999999864
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=211.83 Aligned_cols=189 Identities=23% Similarity=0.314 Sum_probs=157.0
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|++|||||+++||.+++++|+++|++ |++..+ +++..+.+.+.....+.++.++++|+++.++++++++++.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~--vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA--VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe--EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999997 666654 33333344444444466788999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|... +...+.+.+.++|++++++|+.+++.+++++++.|.++..+ ..++|+++||..+..+
T Consensus 80 ~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~- 149 (248)
T PRK06123 80 RLDALVNNAGILE------AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG---RGGAIVNVSSMAARLG- 149 (248)
T ss_pred CCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---CCeEEEEECchhhcCC-
Confidence 9999999999764 34457788899999999999999999999999999764311 1148999999887766
Q ss_pred CCCCC-ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGG-WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++ +..|+++|+++++++++++.|+.+.||+ +|++.||.+++
T Consensus 150 --~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~-v~~i~pg~v~~ 192 (248)
T PRK06123 150 --SPGEYIDYAASKGAIDTMTIGLAKEVAAEGIR-VNAVRPGVIYT 192 (248)
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCcccC
Confidence 444 3579999999999999999999999999 66999998863
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=211.63 Aligned_cols=185 Identities=19% Similarity=0.194 Sum_probs=159.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|++|||||++|||++++++|+++|++ |++.+|+.+..+.+.+.+... +.++.++++|+++++++.++++++.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRD--LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999996 888899877666654443322 4578999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|++|||+|+.. ...+.+.+.+.+++.+++|+.+++.+++.+.+.|++.+.+ ++|++||..+..+
T Consensus 80 ~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~~ 146 (248)
T PRK08251 80 GGLDRVIVNAGIGK-------GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSG------HLVLISSVSAVRG 146 (248)
T ss_pred CCCCEEEECCCcCC-------CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEEeccccccC
Confidence 99999999999863 4455566778889999999999999999999999876654 9999999887766
Q ss_pred CCCCCC-ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGG-WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++ ...|+.+|++++++++.++.++...+++ +++|+||.+++
T Consensus 147 ---~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~pg~v~t 189 (248)
T PRK08251 147 ---LPGVKAAYAASKAGVASLGEGLRAELAKTPIK-VSTIEPGYIRS 189 (248)
T ss_pred ---CCCCcccHHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCcCcc
Confidence 453 5789999999999999999999999999 56999999874
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=201.96 Aligned_cols=181 Identities=23% Similarity=0.267 Sum_probs=157.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++.|+.+++||+..|||++++..|++.|+. |+...|+++.+..+..+. +..+..+..|+++++.+.+++...
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~--ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v-- 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQ--VIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV-- 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCE--EEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc--
Confidence 3578999999999999999999999999996 999999987766654443 556899999999998887766655
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|++|||||... ..++.+.+.++|+..|++|+.+.+.+.|...+.+..+... |.||++||.++.
T Consensus 76 --~pidgLVNNAgvA~-------~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~-----GaIVNvSSqas~ 141 (245)
T KOG1207|consen 76 --FPIDGLVNNAGVAT-------NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIK-----GAIVNVSSQASI 141 (245)
T ss_pred --Cchhhhhccchhhh-------cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCC-----ceEEEecchhcc
Confidence 79999999999984 7789999999999999999999999999976655444322 489999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.. ..++..|+++|+|+++++++++.|+++.+|| +|+|+|-.+
T Consensus 142 R~---~~nHtvYcatKaALDmlTk~lAlELGp~kIR-VNsVNPTVV 183 (245)
T KOG1207|consen 142 RP---LDNHTVYCATKAALDMLTKCLALELGPQKIR-VNSVNPTVV 183 (245)
T ss_pred cc---cCCceEEeecHHHHHHHHHHHHHhhCcceeE-eeccCCeEE
Confidence 77 7888999999999999999999999999999 889999654
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=211.49 Aligned_cols=185 Identities=21% Similarity=0.262 Sum_probs=159.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+|+||++++++|+++|+. |++.+|+.+..+.+... .+.++.++.+|+++.++++++++++.++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAI--VGLHGTRVEKLEALAAE---LGERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHH---hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999995 77778876554443322 2457888999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.+.+.+++.+ ++|++||..+..
T Consensus 78 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~ 144 (245)
T PRK12936 78 LEGVDILVNNAGITK-------DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG------RIINITSVVGVT 144 (245)
T ss_pred cCCCCEEEECCCCCC-------CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCC------EEEEECCHHhCc
Confidence 999999999999763 4556677888999999999999999999999988765554 999999988777
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++.++++.++.++.+.|++ +|+++||.+++
T Consensus 145 ~---~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~-v~~i~pg~~~t 187 (245)
T PRK12936 145 G---NPGQANYCASKAGMIGFSKSLAQEIATRNVT-VNCVAPGFIES 187 (245)
T ss_pred C---CCCCcchHHHHHHHHHHHHHHHHHhhHhCeE-EEEEEECcCcC
Confidence 6 6778899999999999999999999999999 66999999863
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=214.78 Aligned_cols=189 Identities=21% Similarity=0.219 Sum_probs=146.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhh-cCCCceeEEEecCCChHHH----HHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKN-RFPERLDVLQLDLTVESTI----EASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v----~~~~~~~~ 102 (231)
++++||||++|||++++++|+++|++ |++.+| +.+..+.+.+.+. ..+.++.++++|++|++++ +++++++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR--VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe--EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 58999999999999999999999997 776654 4445544444332 2345777899999999865 56666666
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhc-----------hHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVE-----------KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV 171 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (231)
+.++++|+||||||...+ .++.+.+ .++|.+++++|+.+++.+++++.|.|...........
T Consensus 80 ~~~g~iD~lv~nAG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~ 152 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYP-------TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTN 152 (267)
T ss_pred HccCCceEEEECCccCCC-------CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCC
Confidence 778999999999997541 1222222 2368899999999999999999999864321111122
Q ss_pred eEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 172 ~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+.+++++|..+..+ .+++.+|++||+|+++|+++++.|++++||+ +|+|+||.++
T Consensus 153 ~~iv~~~s~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~~~ 207 (267)
T TIGR02685 153 LSIVNLCDAMTDQP---LLGFTMYTMAKHALEGLTRSAALELAPLQIR-VNGVAPGLSL 207 (267)
T ss_pred eEEEEehhhhccCC---CcccchhHHHHHHHHHHHHHHHHHHhhhCeE-EEEEecCCcc
Confidence 58999999877654 6788899999999999999999999999999 6799999875
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=212.26 Aligned_cols=185 Identities=20% Similarity=0.203 Sum_probs=154.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
..+|++|||||+++||++++++|+++|++ |++.++ +.+..+.+.+.+...+.++.++.+|++|.+++.++++++.+.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFD--VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 665555 344444444444444667899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.+.++..+ ++++++|..+..
T Consensus 85 ~~~iD~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~~s~~~~~ 151 (258)
T PRK09134 85 LGPITLLVNNASLFE-------YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG------LVVNMIDQRVWN 151 (258)
T ss_pred cCCCCEEEECCcCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------eEEEECchhhcC
Confidence 999999999999763 3456678889999999999999999999999999876554 899988865443
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
. .|++..|+++|+++++++++++.++.+. |+ +|+++||.+.
T Consensus 152 ~---~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~-v~~i~PG~v~ 192 (258)
T PRK09134 152 L---NPDFLSYTLSKAALWTATRTLAQALAPR-IR-VNAIGPGPTL 192 (258)
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhcCC-cE-EEEeeccccc
Confidence 3 5667789999999999999999999876 98 6799999875
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=220.36 Aligned_cols=190 Identities=21% Similarity=0.250 Sum_probs=155.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-C-CCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++|||||++|||+++|++|+++|++ |++++|+.+..+...+.+.. . +.++.++.+|+++.++++++++++.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~--vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAH--VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999996 88889987665543333322 1 3478899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||... + ..+.+.++++..+++|+.+++.+++.++|.|++.+.+ +||++||..+
T Consensus 91 ~~~~~iD~li~nAg~~~------~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~------~iV~vSS~~~ 155 (306)
T PRK06197 91 AAYPRIDLLINNAGVMY------T---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGS------RVVTVSSGGH 155 (306)
T ss_pred hhCCCCCEEEECCcccc------C---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCC------EEEEECCHHH
Confidence 99999999999999763 1 1345667889999999999999999999999876544 9999999764
Q ss_pred cc-CC---------CCCCCccchhhhHHHHHHHHHHhhhhccccCCcee-eeccCCCCCC
Q 026924 183 SI-GD---------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYM-YSVASRHCRY 231 (231)
Q Consensus 183 ~~-~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~-~~v~pg~~~~ 231 (231)
.. +. .+.++...|++||++++.|++.++.++++.|++++ ++++||.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T 215 (306)
T PRK06197 156 RIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNT 215 (306)
T ss_pred hccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccC
Confidence 43 10 11345568999999999999999999999998832 3557999974
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=209.96 Aligned_cols=193 Identities=19% Similarity=0.195 Sum_probs=160.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|++|||||+++||.+++++|+++|++ |++++|+.. ..+...+..+..+.++.++++|+++++++.++++++.+.++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFD--LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 479999999999999999999999997 788887643 22333333334456789999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|...+ ...++.+.+.++|++.+++|+.+++.+++++.+.|.++..+.....+++|++||..+..+
T Consensus 80 ~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~- 153 (256)
T PRK12745 80 RIDCLVNNAGVGVK-----VRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV- 153 (256)
T ss_pred CCCEEEECCccCCC-----CCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-
Confidence 99999999997531 134567788899999999999999999999999998765432222358999999888766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.|+.++|++ ++++.||.+++
T Consensus 154 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~-v~~i~pg~v~t 195 (256)
T PRK12745 154 --SPNRGEYCISKAGLSMAAQLFAARLAEEGIG-VYEVRPGLIKT 195 (256)
T ss_pred --CCCCcccHHHHHHHHHHHHHHHHHHHHhCCE-EEEEecCCCcC
Confidence 5677899999999999999999999999999 66999999863
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=213.99 Aligned_cols=185 Identities=25% Similarity=0.371 Sum_probs=160.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.+..... +.++.++.+|++|++++++ ++++.+.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence 5789999999999999999999999997 888899876666654443332 3578999999999999999 9999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... .....+.+.+++++.+++|+.+++.+++.++|.|++.+.+ ++|++||..+..
T Consensus 79 ~~~id~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~vsS~~~~~ 145 (280)
T PRK06914 79 IGRIDLLVNNAGYAN-------GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG------KIINISSISGRV 145 (280)
T ss_pred cCCeeEEEECCcccc-------cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEECcccccC
Confidence 999999999999763 4456677889999999999999999999999999776554 899999988777
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++++++++.|+.++||+ ++++.||.+++
T Consensus 146 ~---~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~-v~~v~pg~~~t 188 (280)
T PRK06914 146 G---FPGLSPYVSSKYALEGFSESLRLELKPFGID-VALIEPGSYNT 188 (280)
T ss_pred C---CCCCchhHHhHHHHHHHHHHHHHHhhhhCCE-EEEEecCCccc
Confidence 6 6778899999999999999999999999999 55999998864
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=211.95 Aligned_cols=186 Identities=21% Similarity=0.284 Sum_probs=156.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||+++||.+++++|+++|++ |++++|+....+...+.. . ..++++|++++++++++++++.+.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~ 76 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGAT--VVVGDIDPEAGKAAADEV---G--GLFVPTDVTDEDAVNALFDTAAET 76 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHc---C--CcEEEeeCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999996 888888765544433322 1 257899999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|...+ ....+.+.+.+.|++.+++|+.+++.+++.++|.|++++.+ ++|+++|..+..
T Consensus 77 ~~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g------~iv~~sS~~~~~ 145 (255)
T PRK06057 77 YGSVDIAFNNAGISPP-----EDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG------SIINTASFVAVM 145 (255)
T ss_pred cCCCCEEEECCCcCCC-----CCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc------EEEEEcchhhcc
Confidence 9999999999997531 12345677888999999999999999999999999876554 999999987766
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+. .+++..|+++|+++++++++++.++.++||+ +++|+||.+++
T Consensus 146 g~--~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~-v~~i~pg~v~t 189 (255)
T PRK06057 146 GS--ATSQISYTASKGGVLAMSRELGVQFARQGIR-VNALCPGPVNT 189 (255)
T ss_pred CC--CCCCcchHHHHHHHHHHHHHHHHHHHhhCcE-EEEEeeCCcCC
Confidence 52 2366789999999999999999999999999 66999999874
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=211.03 Aligned_cols=189 Identities=18% Similarity=0.246 Sum_probs=163.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|+++||||+++||+.++++|+++|++ .|++++|+.+..+...+.+...+.++.++.+|+++++++.++++.+.++
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAA-GLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCC-eEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999996 5888899876655554444445668889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|.. ....+.+.+.+.|++.+++|+.+++.+++.+++.|.+++.. +++|++||..+..
T Consensus 82 ~g~id~li~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----g~iv~~ss~~~~~ 149 (260)
T PRK06198 82 FGRLDALVNAAGLT-------DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAE-----GTIVNIGSMSAHG 149 (260)
T ss_pred hCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CEEEEECCccccc
Confidence 99999999999976 34556778899999999999999999999999999765321 3899999988765
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .++...|+++|+++++++++++.|+.+.||+ +|+++||.++
T Consensus 150 ~---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~-v~~i~pg~~~ 191 (260)
T PRK06198 150 G---QPFLAAYCASKGALATLTRNAAYALLRNRIR-VNGLNIGWMA 191 (260)
T ss_pred C---CCCcchhHHHHHHHHHHHHHHHHHhcccCeE-EEEEeecccc
Confidence 5 5777899999999999999999999999999 6699999876
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=210.73 Aligned_cols=192 Identities=21% Similarity=0.265 Sum_probs=157.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cC-CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RF-PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~-~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|++|||||+++||+++|++|+++|++ |++++|+.+..+.+.+.+. .. +..+.++++|++|++++.++++++.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGI--VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999997 8888998777666544432 22 23566779999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|++||||+..... ....+.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+.
T Consensus 80 ~~~~id~vi~~A~~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~ 149 (256)
T PRK09186 80 KYGKIDGAVNCAYPRNKD----YGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG------NLVNISSIYGV 149 (256)
T ss_pred HcCCccEEEECCcccccc----ccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc------eEEEEechhhh
Confidence 999999999999754200 12456778889999999999999999999999999877655 99999998765
Q ss_pred cCCC-------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDN-------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~-------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+.. +......|+++|+++++++++++.|+.+.||+ +|++.||.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~-v~~i~Pg~~~ 202 (256)
T PRK09186 150 VAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIR-VNCVSPGGIL 202 (256)
T ss_pred ccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeE-EEEEeccccc
Confidence 4310 01122369999999999999999999999999 7799999774
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=214.20 Aligned_cols=177 Identities=24% Similarity=0.277 Sum_probs=154.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+ ..+.++.+|++++++++++++++.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYE--VWATARKAEDVEALAA------AGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999999999999996 8888888654433221 246788999999999999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+.. | ++|+++|..+..+
T Consensus 74 d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~~~~--- 136 (274)
T PRK05693 74 DVLINNAGYG-------AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSR-G------LVVNIGSVSGVLV--- 136 (274)
T ss_pred CEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------EEEEECCccccCC---
Confidence 9999999976 345667788999999999999999999999999987543 3 8999999888766
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.++++++.|++++||+ +++|.||.|++
T Consensus 137 ~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~-v~~v~pg~v~t 178 (274)
T PRK05693 137 TPFAGAYCASKAAVHALSDALRLELAPFGVQ-VMEVQPGAIAS 178 (274)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEecCcccc
Confidence 6777899999999999999999999999999 66999999874
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=201.80 Aligned_cols=180 Identities=21% Similarity=0.229 Sum_probs=156.8
Q ss_pred cCeEEEEecCC-CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH-H
Q 026924 27 KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-K 104 (231)
Q Consensus 27 ~~k~~LVtGas-~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~-~ 104 (231)
+.|.+||||++ ||||.++++.|++.|+. |+.+.|+.+....+... .++..+.+|+++++++..+..++++ .
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~--V~AtaR~~e~M~~L~~~-----~gl~~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYL--VYATARRLEPMAQLAIQ-----FGLKPYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeE--EEEEccccchHhhHHHh-----hCCeeEEeccCChHHHHHHHHHHhhCC
Confidence 35789999986 89999999999999996 99999988776665432 3478899999999999999999998 7
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|.+|+++||||.. =..+..+.+.+..++.|++|++|.+.+.|++...+-+.+ | .|||+.|..+..
T Consensus 79 ~Gkld~L~NNAG~~-------C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-G------tIVnvgSl~~~v 144 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQS-------CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-G------TIVNVGSLAGVV 144 (289)
T ss_pred CCceEEEEcCCCCC-------cccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-c------eEEEecceeEEe
Confidence 89999999999976 367788999999999999999999999999995554444 4 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .|..+.|++||+|++++++.|+.|++|.||+|+ .+.||.|++
T Consensus 145 p---fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vi-n~itGGv~T 187 (289)
T KOG1209|consen 145 P---FPFGSIYSASKAAIHAYARTLRLELKPFGVRVI-NAITGGVAT 187 (289)
T ss_pred c---cchhhhhhHHHHHHHHhhhhcEEeeeccccEEE-Eecccceec
Confidence 7 677889999999999999999999999999977 667777653
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=200.10 Aligned_cols=195 Identities=36% Similarity=0.514 Sum_probs=162.6
Q ss_pred eEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH--c
Q 026924 29 GVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK--Y 105 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~--~ 105 (231)
|.++||||.+|||+.++++|.+ .|-. +++...|+.+.+....++......+++.+++|+++.+++.++++++.+- .
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~-~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIE-VIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcE-EEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 5699999999999999999987 4665 5566667777653333444445779999999999999999999999986 4
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC-----cccCceEEEEeccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG-----IERDVAVVANLSAR 180 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~iv~iss~ 180 (231)
..+|+++||||+.. +.....+.+.+.|-+.+++|..+++.+.|+++|++++.... -...+..|||++|.
T Consensus 83 ~GlnlLinNaGi~~------~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~ 156 (249)
T KOG1611|consen 83 DGLNLLINNAGIAL------SYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSS 156 (249)
T ss_pred CCceEEEeccceee------ecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecc
Confidence 58999999999986 55566667778899999999999999999999999876432 12255689999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++..+.....++.+|..||+|+++|+|+++.|+.+.+|-|+ ++|||+|++
T Consensus 157 ~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~-sihPGwV~T 206 (249)
T KOG1611|consen 157 AGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVV-SIHPGWVQT 206 (249)
T ss_pred ccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEE-EecCCeEEc
Confidence 88877655677889999999999999999999999999977 999999975
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=212.90 Aligned_cols=188 Identities=18% Similarity=0.142 Sum_probs=160.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+.+.|++|||||+++||++++++|+++|++ |++.+|+.+..+...+.....+.++.++.+|+++++++.++++++.+.
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFP--VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 346789999999999999999999999996 888888766555444444444567889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... .....+.+.++|++.+++|+.+++.+++++++.|.+++.+ +||++||..+..
T Consensus 85 ~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g------~iv~isS~~~~~ 151 (274)
T PRK07775 85 LGEIEVLVSGAGDTY-------FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRG------DLIFVGSDVALR 151 (274)
T ss_pred cCCCCEEEECCCcCC-------CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------eEEEECChHhcC
Confidence 999999999999753 3455667888999999999999999999999998776554 899999987765
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|++++.++++++.++.+.||+ ++++.||.+++
T Consensus 152 ~---~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~-v~~v~pG~~~t 194 (274)
T PRK07775 152 Q---RPHMGAYGAAKAGLEAMVTNLQMELEGTGVR-ASIVHPGPTLT 194 (274)
T ss_pred C---CCCcchHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeCCcccC
Confidence 5 5667789999999999999999999999999 66999998864
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=209.20 Aligned_cols=182 Identities=19% Similarity=0.240 Sum_probs=154.4
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
+|||||++|||.++|++|+++|++ |++.+|+ .+..+.+.+.++..+.++.++++|+++++++.++++++.+.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE--ICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999997 6666654 3334444455555567899999999999999999999999999999
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhh-hhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS-PLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
++|||+|... ..++.+.+.++|++++++|+.+++.+++.+. |.+++++.+ ++|++||..+..+
T Consensus 79 ~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~iv~vsS~~~~~~--- 142 (239)
T TIGR01831 79 GVVLNAGITR-------DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGG------RIITLASVSGVMG--- 142 (239)
T ss_pred EEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCe------EEEEEcchhhccC---
Confidence 9999999763 4456677889999999999999999999875 555444443 9999999888777
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++++++++.|+.++||+ +|+|+||.+++
T Consensus 143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 184 (239)
T TIGR01831 143 NRGQVNYSAAKAGLIGATKALAVELAKRKIT-VNCIAPGLIDT 184 (239)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhHhCeE-EEEEEEccCcc
Confidence 6778899999999999999999999999999 66999999874
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=210.21 Aligned_cols=186 Identities=24% Similarity=0.348 Sum_probs=157.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEE-eecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++++++||||+|+||+++|++|+++|++ |++ ..|+++..+...+.....+.++.++++|++|++++.++++++.+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~--v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGAL--VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999997 544 46776555444444433356788999999999999999999988
Q ss_pred Hc------CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 104 KY------GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 104 ~~------g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
++ +++|++|||+|... ...+.+.+.+.|++.+++|+.+++.+++.+++.|.+.+ ++|++
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~v~~ 145 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGT-------QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEG--------RVINI 145 (254)
T ss_pred HhccccCCCCccEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCC--------EEEEE
Confidence 77 57999999999753 45677888999999999999999999999999986542 89999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+ .+++..|+++|++++.++++++.++.++|++ ++++.||.+++
T Consensus 146 sS~~~~~~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~-v~~v~pg~~~t 195 (254)
T PRK12746 146 SSAEVRLG---FTGSIAYGLSKGALNTMTLPLAKHLGERGIT-VNTIMPGYTKT 195 (254)
T ss_pred CCHHhcCC---CCCCcchHhhHHHHHHHHHHHHHHHhhcCcE-EEEEEECCccC
Confidence 99877655 6788899999999999999999999999999 66999999863
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=209.04 Aligned_cols=181 Identities=20% Similarity=0.292 Sum_probs=157.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++++||||+|+||.+++++|+++|++ |++.+|+.+..+.+.+. .+.++.++++|++++++++++++++.+.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHK--VIATGRRQERLQELKDE---LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---hccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 36999999999999999999999997 88889987655444332 24578899999999999999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|++|||+|... ...+..+.+.++|++++++|+.+++.+++.++|.|.+++.+ ++|++||..+..+
T Consensus 76 d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~--- 140 (248)
T PRK10538 76 DVLVNNAGLAL------GLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG------HIINIGSTAGSWP--- 140 (248)
T ss_pred CEEEECCCccC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECCcccCCC---
Confidence 99999999753 23456677889999999999999999999999999877654 9999999877655
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++++++.++.|+.++||+ +|+|.||.++
T Consensus 141 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~-v~~v~pg~i~ 181 (248)
T PRK10538 141 YAGGNVYGATKAFVRQFSLNLRTDLHGTAVR-VTDIEPGLVG 181 (248)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhcCCCcE-EEEEeCCeec
Confidence 5777899999999999999999999999999 7799999875
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=208.65 Aligned_cols=189 Identities=21% Similarity=0.282 Sum_probs=162.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCC--ChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLT--VESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls--~~~~v~~~~~~~ 101 (231)
.+++|++|||||+++||.+++++|++.|++ |++++|+.+..+.+.+.+... ..++.++.+|++ +++++.++++.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGAT--VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCc--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 468999999999999999999999999997 888999876666654444433 346777888885 789999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+.++++|+||||||... +..++.+.+.+.|++.+++|+.+++.++++++++|.+++.+ +|+++||..
T Consensus 87 ~~~~~~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~------~iv~~ss~~ 154 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLG------ELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA------SLVFTSSSV 154 (247)
T ss_pred HHHhCCCCEEEECCcccC------CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC------EEEEEccHh
Confidence 999999999999999754 34566778889999999999999999999999999887654 999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+++++++++++.++...||+ +++++||.+++
T Consensus 155 ~~~~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~-~~~v~pg~v~t 200 (247)
T PRK08945 155 GRQG---RANWGAYAVSKFATEGMMQVLADEYQGTNLR-VNCINPGGTRT 200 (247)
T ss_pred hcCC---CCCCcccHHHHHHHHHHHHHHHHHhcccCEE-EEEEecCCccC
Confidence 7766 5778899999999999999999999999999 67999999863
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=198.93 Aligned_cols=197 Identities=20% Similarity=0.240 Sum_probs=168.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
..+|-+.|||||.+|+|++.+++|+.+|++ |++.|-.+.+-++... +.+.++.|.++|++++.++...+...+.+
T Consensus 6 s~kglvalvtggasglg~ataerlakqgas--v~lldlp~skg~~vak---elg~~~vf~padvtsekdv~aala~ak~k 80 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGAS--VALLDLPQSKGADVAK---ELGGKVVFTPADVTSEKDVRAALAKAKAK 80 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCce--EEEEeCCcccchHHHH---HhCCceEEeccccCcHHHHHHHHHHHHhh
Confidence 458899999999999999999999999997 8888876665555433 34789999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
||++|.+|||||+..... ++....-..-+.|+|++.+++|+.++|++++.....|-+....+.+-++.||+..|.+++.
T Consensus 81 fgrld~~vncagia~a~k-tyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd 159 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAYAFK-TYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD 159 (260)
T ss_pred ccceeeeeeccceeeeee-eeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence 999999999999864100 0112222346778999999999999999999999999776655666678999999999998
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ +.++.+|++||.++.+|+--++++++..||| +|.|.||..|+
T Consensus 160 g---q~gqaaysaskgaivgmtlpiardla~~gir-~~tiapglf~t 202 (260)
T KOG1199|consen 160 G---QTGQAAYSASKGAIVGMTLPIARDLAGDGIR-FNTIAPGLFDT 202 (260)
T ss_pred C---ccchhhhhcccCceEeeechhhhhcccCceE-EEeecccccCC
Confidence 8 8999999999999999999999999999999 67999999875
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=207.61 Aligned_cols=174 Identities=22% Similarity=0.340 Sum_probs=148.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++||||+++||++++++|+++|++ |++.+|+.... ...++.++++|++++ ++++.+.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~ 64 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQ--VYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDW 64 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCE--EEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHh
Confidence 478999999999999999999999999996 88888875321 134688899999887 4555556
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... ...++.+.+.++|++.+++|+.+++.++++++|.+.+++.+ +||++||..+..
T Consensus 65 ~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~ 132 (235)
T PRK06550 65 VPSVDILCNTAGILD------DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG------IIINMCSIASFV 132 (235)
T ss_pred hCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhcc
Confidence 789999999999753 23456778899999999999999999999999999876654 999999988776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++++++++.|+.++||+ +|+|.||.+++
T Consensus 133 ~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~-v~~v~pg~v~t 175 (235)
T PRK06550 133 A---GGGGAAYTASKHALAGFTKQLALDYAKDGIQ-VFGIAPGAVKT 175 (235)
T ss_pred C---CCCCcccHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCCccC
Confidence 6 6778899999999999999999999999999 66999999874
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=207.83 Aligned_cols=184 Identities=27% Similarity=0.371 Sum_probs=155.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC--ccchhhhhhcCC-CceeEEEecCCC-hHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFP-ERLDVLQLDLTV-ESTIEASAKS 100 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~Dls~-~~~v~~~~~~ 100 (231)
.+++|++|||||++|||+++|+.|+++|++ |++..++... .+.+.+.....+ ..+.+..+|+++ .++++.+++.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGAR--VVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCe--EEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 467899999999999999999999999997 7777776554 333333322112 368888999998 9999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCC-cccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPE-TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
+.+.+|++|++|||||... . .++.+.+.++|++.+++|+.+++.+.+.+.|.+.+ + +||++||
T Consensus 80 ~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~--------~Iv~isS 143 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAG-------PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-Q--------RIVNISS 143 (251)
T ss_pred HHHHcCCCCEEEECCCCCC-------CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-C--------eEEEECC
Confidence 9999999999999999873 3 47888888999999999999999999988888872 1 8999999
Q ss_pred CccccCCCCCCC-ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGG-WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+. . .++ +.+|++||+|+.+|++.++.|+.+.||+ +|+|+||.+++
T Consensus 144 ~~~~-~---~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~-v~~v~PG~~~t 191 (251)
T COG1028 144 VAGL-G---GPPGQAAYAASKAALIGLTKALALELAPRGIR-VNAVAPGYIDT 191 (251)
T ss_pred chhc-C---CCCCcchHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEEeccCCC
Confidence 9887 6 455 5899999999999999999999999999 77999998764
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=207.73 Aligned_cols=194 Identities=22% Similarity=0.271 Sum_probs=160.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++++++||||++++||++++++|+++|++ |++++|+....+...+.....+.++.++++|++++++++++++++.+.
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAK--LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999996 888899876666555555555678899999999999999999999988
Q ss_pred cCCccEEEEccccCCCCCC-CCCCccc-chhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 105 YGSLNLLINASGILSIPNV-LQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++|++|||+|....... ..+...+ .+.+.++|++++++|+.+++.+.+.+.+.|.++..+ +.++++||..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-----~~iv~~ss~~- 153 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSK-----GVIINISSIA- 153 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-----eEEEEEcccc-
Confidence 8999999999997531100 0011222 667888999999999999999999999999765322 4889888864
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
..+ .++...|+++|+|+++++++++.|+.++||+ ++++.||.++
T Consensus 154 ~~~---~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~-v~~v~pg~v~ 197 (253)
T PRK08217 154 RAG---NMGQTNYSASKAGVAAMTVTWAKELARYGIR-VAAIAPGVIE 197 (253)
T ss_pred ccC---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEeeCCCc
Confidence 344 5678899999999999999999999999999 6699999986
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=207.25 Aligned_cols=188 Identities=27% Similarity=0.332 Sum_probs=164.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|++|||||+++||.+++++|+++|++ |++. +|+++..+.+.+.....+.++.++.+|+++++++.++++++.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAK--VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999997 7666 8887666555554444456789999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|.. ....+.+.+.++|++.+++|+.+++.+++.+.+.+.+++.+ ++|++||..+.
T Consensus 80 ~~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~ 146 (247)
T PRK05565 80 KFGKIDILVNNAGIS-------NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSG------VIVNISSIWGL 146 (247)
T ss_pred HhCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECCHhhc
Confidence 999999999999976 34566778889999999999999999999999999877654 89999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+....|+++|++++.++++++.++.+.|++ ++++.||.++.
T Consensus 147 ~~---~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~-~~~v~pg~v~t 190 (247)
T PRK05565 147 IG---ASCEVLYSASKGAVNAFTKALAKELAPSGIR-VNAVAPGAIDT 190 (247)
T ss_pred cC---CCCccHHHHHHHHHHHHHHHHHHHHHHcCeE-EEEEEECCccC
Confidence 66 5777899999999999999999999999999 55999999863
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=235.95 Aligned_cols=188 Identities=22% Similarity=0.243 Sum_probs=163.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+++..+.+.+.+...+.++.++++|++|+++++++++++.++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGAT--VFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 567999999999999999999999999996 888999887766665555545668999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchh--chHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKV--EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+|++|++|||||... ...+.+. +.+++++.+++|+.+++.+++.++|.|++++.| +||++||..+
T Consensus 446 ~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~ 512 (657)
T PRK07201 446 HGHVDYLVNNAGRSI-------RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG------HVVNVSSIGV 512 (657)
T ss_pred cCCCCEEEECCCCCC-------CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------EEEEECChhh
Confidence 999999999999753 2222222 247899999999999999999999999887665 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+++++|+++++.|+.+.||+ +|+|+||.+++
T Consensus 513 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~pg~v~T 557 (657)
T PRK07201 513 QTN---APRFSAYVASKAALDAFSDVAASETLSDGIT-FTTIHMPLVRT 557 (657)
T ss_pred cCC---CCCcchHHHHHHHHHHHHHHHHHHHHhhCCc-EEEEECCcCcc
Confidence 655 6778899999999999999999999999999 67999999975
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=215.44 Aligned_cols=192 Identities=18% Similarity=0.193 Sum_probs=154.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|+++.++++++++++.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWH--VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999999999996 888899877666554444333457889999999999999999998877
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||+.. +.....+.+.++|+..+++|+.+++.+++.++|.|++++.+ .++||++||.....
T Consensus 81 ~~~iD~li~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~----~~riV~vsS~~~~~ 150 (322)
T PRK07453 81 GKPLDALVCNAAVYM------PLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP----DPRLVILGTVTANP 150 (322)
T ss_pred CCCccEEEECCcccC------CCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC----CceEEEEcccccCc
Confidence 889999999999753 22223456788999999999999999999999999876421 13999999975432
Q ss_pred C----C----------------------------CCCCCccchhhhHHHHHHHHHHhhhhcc-ccCCceeeeccCCCC
Q 026924 185 G----D----------------------------NRLGGWHSYRASKAALNHDKICVSGVWS-KEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~----~----------------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~~~~~v~pg~~ 229 (231)
+ . .+..+...|+.||.+...+++.+++++. +.||+ +|+++||.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~-v~~v~PG~v 227 (322)
T PRK07453 151 KELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGIT-FSSLYPGCV 227 (322)
T ss_pred cccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeE-EEEecCCcc
Confidence 1 0 0112346799999999999999999995 47999 679999987
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=205.94 Aligned_cols=174 Identities=16% Similarity=0.167 Sum_probs=139.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
+++||||++|||+++++.|+++|++ |++.+|+.+..+.+.+.. ++.++++|++++++++++++++.+ ++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~--v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHK--VTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence 4899999999999999999999997 888888865544433221 356789999999999999888753 699
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
++|||+|....... .....+.+ +.++|++.+++|+.++++++++++|.|++. | +||+++|.. .
T Consensus 72 ~lv~~ag~~~~~~~-~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--g------~Iv~isS~~-------~ 134 (223)
T PRK05884 72 TIVNVPAPSWDAGD-PRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSG--G------SIISVVPEN-------P 134 (223)
T ss_pred EEEECCCccccCCC-Ccccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--C------eEEEEecCC-------C
Confidence 99999985320000 01122333 468999999999999999999999999653 3 999999865 2
Q ss_pred CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 190 GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+.+..|+++|+|+.+|+++++.|++++||+ +|+|+||.+++
T Consensus 135 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~-v~~v~PG~v~t 175 (223)
T PRK05884 135 PAGSAEAAIKAALSNWTAGQAAVFGTRGIT-INAVACGRSVQ 175 (223)
T ss_pred CCccccHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCccCc
Confidence 445789999999999999999999999999 77999999864
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=206.74 Aligned_cols=183 Identities=23% Similarity=0.300 Sum_probs=157.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+++||+++|++|+++|++ |++.+|+... .+.+.......+.++.++++|+++++++.++++++.+++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYR--VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999986 8888887541 11122222223457899999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|.. ....+.+.+.++|++.+++|+.+++.+++.+++.|++.+.+ ++|++||..+..+
T Consensus 81 id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~iss~~~~~~-- 145 (245)
T PRK12824 81 VDILVNNAGIT-------RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYG------RIINISSVNGLKG-- 145 (245)
T ss_pred CCEEEECCCCC-------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe------EEEEECChhhccC--
Confidence 99999999976 34566788899999999999999999999999999876654 9999999887655
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|+++++++++++.++.+.|++ +|++.||.++
T Consensus 146 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~-v~~v~pg~~~ 186 (245)
T PRK12824 146 -QFGQTNYSAAKAGMIGFTKALASEGARYGIT-VNCIAPGYIA 186 (245)
T ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHhCeE-EEEEEEcccC
Confidence 6778899999999999999999999999999 6699999986
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-30 Score=206.92 Aligned_cols=182 Identities=21% Similarity=0.255 Sum_probs=155.7
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcC-C-CceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRF-P-ERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~-~-~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|||||+++||++++++|+++|++ |++++|+ .+..+.+.+.+... + ..+..+++|++++++++++++++.+++++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAK--VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999997 8888887 54444444443322 2 24567899999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|.. ....+.+.+.+++++++++|+.+++.+++.++|.|++++.+ +|+++||..+..+
T Consensus 80 id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~ii~~ss~~~~~~-- 144 (251)
T PRK07069 80 LSVLVNNAGVG-------SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPA------SIVNISSVAAFKA-- 144 (251)
T ss_pred ccEEEECCCcC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc------EEEEecChhhccC--
Confidence 99999999976 34567788889999999999999999999999999877654 9999999887766
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccC--CceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEG--SSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~g--i~~~~~v~pg~~~~ 231 (231)
.+++..|+++|++++.++++++.|+++++ |+ +|+|+||.+++
T Consensus 145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~-v~~v~pg~v~t 188 (251)
T PRK07069 145 -EPDYTAYNASKAAVASLTKSIALDCARRGLDVR-CNSIHPTFIRT 188 (251)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEE-EEEEeecccCC
Confidence 67888999999999999999999998776 77 67999999874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=209.49 Aligned_cols=181 Identities=25% Similarity=0.377 Sum_probs=156.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.|++|||||+|+||++++++|+++|++ |++.+|+.+..+.+.+ ..+.++.++++|++|.+++.++++++.+.+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~--v~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDR--VAATVRRPDALDDLKA---RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999996 8888887654443332 22457889999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||+|... .....+.+.+++++.+++|+.+++.++++++|+|++.+.+ +||++||..+..+
T Consensus 77 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~-- 141 (276)
T PRK06482 77 IDVVVSNAGYGL-------FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGG------RIVQVSSEGGQIA-- 141 (276)
T ss_pred CCEEEECCCCCC-------CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcCcccccC--
Confidence 999999999763 4556677888999999999999999999999999876554 9999999876655
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++.++++++.++.+.|++ ++.+.||.++
T Consensus 142 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~-v~~v~pg~~~ 182 (276)
T PRK06482 142 -YPGFSLYHATKWGIEGFVEAVAQEVAPFGIE-FTIVEPGPAR 182 (276)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhccCcE-EEEEeCCccc
Confidence 6778899999999999999999999999999 5599999874
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=205.00 Aligned_cols=183 Identities=20% Similarity=0.299 Sum_probs=157.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+++||++++++|+++|++ |+++.| ++...+.+.+.....+.++.++.+|++++++++++++++.+.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR--VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999997 777776 443333333333333567899999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||+|... ...+.+.+.++|++.+++|+.+++.+++.+++.|.+.+.+ +|+++||..+..+
T Consensus 79 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~iss~~~~~~-- 143 (242)
T TIGR01829 79 IDVLVNNAGITR-------DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG------RIINISSVNGQKG-- 143 (242)
T ss_pred CcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhcCC--
Confidence 999999999763 3456777889999999999999999999999999877654 9999999887766
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+++..|+++|++++.++++++.++.+.|++ +|++.||.++
T Consensus 144 -~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~-v~~i~pg~~~ 184 (242)
T TIGR01829 144 -QFGQTNYSAAKAGMIGFTKALAQEGATKGVT-VNTISPGYIA 184 (242)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhhhhCeE-EEEEeeCCCc
Confidence 6778899999999999999999999999999 6699999986
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=207.91 Aligned_cols=183 Identities=21% Similarity=0.292 Sum_probs=159.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++++|||||+|+||++++++|+++|++ |++++|++...+.+.+.+...+.++.++.+|++++++++++++++.+++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQ--LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999996 888899876666555544445668999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchh-chHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKV-EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
+|++|||+|... ...+.+. +.+++++.+++|+.+++.+++.+.+.|.+.. +++|++||..+..+
T Consensus 79 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~~iv~~sS~~~~~~- 143 (263)
T PRK06181 79 IDILVNNAGITM-------WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-------GQIVVVSSLAGLTG- 143 (263)
T ss_pred CCEEEECCCccc-------ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CEEEEEecccccCC-
Confidence 999999999763 4455666 8889999999999999999999999987543 38999999877655
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+++..|+++|+++++++++++.++.++|++ +|++.||.++
T Consensus 144 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~-~~~i~pg~v~ 184 (263)
T PRK06181 144 --VPTRSGYAASKHALHGFFDSLRIELADDGVA-VTVVCPGFVA 184 (263)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHhhhcCce-EEEEecCccc
Confidence 6778899999999999999999999999999 6699999885
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=205.47 Aligned_cols=186 Identities=18% Similarity=0.230 Sum_probs=155.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++++++|||||+++||++++++|+++|++ |++..++ .+............+.++..+.+|+++++++.++++++.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSL--VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATI 79 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999997 6555543 333333333334445678889999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|++|||+|... ..+..+.+.+.|++.+++|+.+++.+++.+.|.|.+.+ ++|+++|..+
T Consensus 80 ~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~iv~~sS~~~ 144 (252)
T PRK06077 80 DRYGVADILVNNAGLGL-------FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGG--------AIVNIASVAG 144 (252)
T ss_pred HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCc--------EEEEEcchhc
Confidence 99999999999999763 34566677788999999999999999999999987642 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+++++++++++.|+++ +++ +|.+.||.+++
T Consensus 145 ~~~---~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~-v~~v~Pg~i~t 188 (252)
T PRK06077 145 IRP---AYGLSIYGAMKAAVINLTKYLALELAP-KIR-VNAIAPGFVKT 188 (252)
T ss_pred cCC---CCCchHHHHHHHHHHHHHHHHHHHHhc-CCE-EEEEeeCCccC
Confidence 655 677889999999999999999999988 899 67999999864
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=211.74 Aligned_cols=191 Identities=28% Similarity=0.431 Sum_probs=160.4
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc--CCCceeEEEecCCChHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
...++.+++++|||+++|||+++|+.|+++|++ |++.+|+.+..++..+.+.. ...++.+++||+++.++|.++.+
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~--Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~ 106 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAH--VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAE 106 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHH
Confidence 335778999999999999999999999999985 99999998777776555443 34588899999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
+.++.++++|++|||||++.++ ...+.+.+|..|.+|+.|++.+++.++|.|+.+..+ |||++||
T Consensus 107 ~~~~~~~~ldvLInNAGV~~~~---------~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~------RIV~vsS 171 (314)
T KOG1208|consen 107 EFKKKEGPLDVLINNAGVMAPP---------FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPS------RIVNVSS 171 (314)
T ss_pred HHHhcCCCccEEEeCcccccCC---------cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCC------CEEEEcC
Confidence 9999999999999999998622 156667899999999999999999999999987643 9999999
Q ss_pred Ccccc--------CCCC--CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSI--------GDNR--LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~--------~~~~--~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+.. +... ..+...|+.||.+...+++.+++.+.+ ||. +|+++||.+++
T Consensus 172 ~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~-~~~~hPG~v~t 231 (314)
T KOG1208|consen 172 ILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVT-TYSVHPGVVKT 231 (314)
T ss_pred ccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-Cce-EEEECCCcccc
Confidence 87511 0000 223335999999999999999999998 999 66999998864
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=231.55 Aligned_cols=190 Identities=22% Similarity=0.311 Sum_probs=163.8
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCC-CceeEEEecCCChHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFP-ERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~-~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
...+++|++|||||++|||++++++|+++|++ |++.+|+.+..+.+.+... ..+ .++..+++|+++++++++++++
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~--Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAH--VVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence 34678999999999999999999999999996 8888998766555443332 222 3678899999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|++|||||... ..++.+.+.++|+..+++|+.+++.+++.+++.|.+++.+ ++||++||.
T Consensus 487 i~~~~g~iDilV~nAG~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~-----g~IV~iSS~ 554 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIAT-------SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG-----GNIVFIASK 554 (676)
T ss_pred HHHhcCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEeCh
Confidence 9999999999999999763 4566778899999999999999999999999999876532 489999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+..+ .++...|+++|+++++++++++.|++++||+ +|+|+||.|.
T Consensus 555 ~a~~~---~~~~~aY~aSKaA~~~l~r~lA~el~~~gIr-Vn~V~Pg~V~ 600 (676)
T TIGR02632 555 NAVYA---GKNASAYSAAKAAEAHLARCLAAEGGTYGIR-VNTVNPDAVL 600 (676)
T ss_pred hhcCC---CCCCHHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEECCcee
Confidence 87766 6778899999999999999999999999999 7799999873
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=203.13 Aligned_cols=187 Identities=21% Similarity=0.256 Sum_probs=157.8
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC----CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP----NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~----~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+++|++|||||+|+||+++++.|+++|++ |++.+|.. +..+.+.+.....+.++.++.+|+++.++++++++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGAD--VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 56889999999999999999999999997 77765532 2222333444444668899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhh-hhhhcCCCCcccCceEEEEeccC
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS-PLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
.++++++|++|||+|.. ....+.+.+.++|++.+++|+.+++.+++.+. +.+.+++.+ ++|++||.
T Consensus 82 ~~~~~~~d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~iv~~sS~ 148 (249)
T PRK12827 82 VEEFGRLDILVNNAGIA-------TDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGG------RIVNIASV 148 (249)
T ss_pred HHHhCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCe------EEEEECCc
Confidence 99999999999999976 34567778889999999999999999999999 666555443 89999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+.+|++++.++++++.++++.|++ +++++||.+++
T Consensus 149 ~~~~~---~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~-~~~i~pg~v~t 195 (249)
T PRK12827 149 AGVRG---NRGQVNYAASKAGLIGLTKTLANELAPRGIT-VNAVAPGAINT 195 (249)
T ss_pred hhcCC---CCCCchhHHHHHHHHHHHHHHHHHhhhhCcE-EEEEEECCcCC
Confidence 87766 5778899999999999999999999999999 55999999864
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=200.87 Aligned_cols=183 Identities=34% Similarity=0.490 Sum_probs=145.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||++|||++++++|+++|..+.|++..|+.... ....++.++++|++++++++++. ++++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~i 68 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLS----EQFTQL 68 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence 479999999999999999999987543466666644321 11347888999999999988753 456899
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|++|||+|....... .+...+.+.+.+.|++.+++|+.+++.+++.++|.|.+++.+ +++++||..+.....+
T Consensus 69 d~li~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~------~i~~iss~~~~~~~~~ 141 (235)
T PRK09009 69 DWLINCVGMLHTQDK-GPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESA------KFAVISAKVGSISDNR 141 (235)
T ss_pred CEEEECCcccccccc-CcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCc------eEEEEeecccccccCC
Confidence 999999998642110 023456778889999999999999999999999999876554 8999998766443333
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccc--cCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSK--EGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~--~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+++++|+++++.|+.+ .+|+ +|+|+||.+++
T Consensus 142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~-v~~v~PG~v~t 185 (235)
T PRK09009 142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGV-VLALHPGTTDT 185 (235)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeE-EEEEcccceec
Confidence 567789999999999999999999987 6998 77999999874
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=197.06 Aligned_cols=158 Identities=20% Similarity=0.211 Sum_probs=139.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||++|||++++++|+++ ++ |++.+|+.. .++||+++++++++++++ ++++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~--vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id 57 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HE--VITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVD 57 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-Cc--EEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCC
Confidence 6999999999999999999998 75 888888652 368999999999988875 47899
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+++.|+|.+++ +|+++||..+..+ .
T Consensus 58 ~lv~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g--------~iv~iss~~~~~~---~ 119 (199)
T PRK07578 58 AVVSAAGKV-------HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGG--------SFTLTSGILSDEP---I 119 (199)
T ss_pred EEEECCCCC-------CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------eEEEEcccccCCC---C
Confidence 999999975 345677888999999999999999999999999997542 8999999887665 6
Q ss_pred CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 190 GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+++..|+++|+++++|+++++.|+ ++||+ +|+|+||.+++
T Consensus 120 ~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~-v~~i~Pg~v~t 159 (199)
T PRK07578 120 PGGASAATVNGALEGFVKAAALEL-PRGIR-INVVSPTVLTE 159 (199)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHc-cCCeE-EEEEcCCcccC
Confidence 888899999999999999999999 89999 77999999874
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-29 Score=201.16 Aligned_cols=187 Identities=24% Similarity=0.359 Sum_probs=160.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++|++||||++|+||++++++|++.|++ |++..|+.. ..+.+.+.....+.++.++++|+++++++.++++++.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGAN--VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 666666544 23344444444466889999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++||++|... .....+.+.+.+++.+++|+.+++.+++.+++.+.+.+.+ +++++||..+.
T Consensus 80 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~iss~~~~ 146 (248)
T PRK05557 80 EFGGVDILVNNAGITR-------DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSG------RIINISSVVGL 146 (248)
T ss_pred HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEEcccccC
Confidence 9999999999999763 4555677888999999999999999999999999876544 89999998777
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .++...|+++|++++.+++.++.++.+.+++ ++++.||.++
T Consensus 147 ~~---~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~-~~~v~pg~~~ 189 (248)
T PRK05557 147 MG---NPGQANYAASKAGVIGFTKSLARELASRGIT-VNAVAPGFIE 189 (248)
T ss_pred cC---CCCCchhHHHHHHHHHHHHHHHHHhhhhCeE-EEEEecCccC
Confidence 66 5778899999999999999999999999999 6699999986
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=201.86 Aligned_cols=178 Identities=19% Similarity=0.259 Sum_probs=144.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|++|||||+|+||++++++|+++|++ |++..++ .+..+.+.. .. .+.++.+|+++++++.+++++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~l~~---~~--~~~~~~~D~~~~~~~~~~~~~--- 72 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGAN--VRFTYAGSKDAAERLAQ---ET--GATAVQTDSADRDAVIDVVRK--- 72 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCCHHHHHHHHH---Hh--CCeEEecCCCCHHHHHHHHHH---
Confidence 367899999999999999999999999997 6666553 332222222 11 356788999999988777653
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||+|... .....+.+.++|++.+++|+.+++.+++++.+.|.+. + ++|+++|..+.
T Consensus 73 -~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g------~iv~isS~~~~ 136 (237)
T PRK12742 73 -SGALDILVVNAGIAV-------FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG--G------RIIIIGSVNGD 136 (237)
T ss_pred -hCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC--C------eEEEEeccccc
Confidence 578999999999753 3455677889999999999999999999999998643 2 99999998764
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.. +.+++..|+++|++++.++++++.++.++||+ +|+|+||.+++
T Consensus 137 ~~--~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~-v~~v~Pg~~~t 181 (237)
T PRK12742 137 RM--PVAGMAAYAASKSALQGMARGLARDFGPRGIT-INVVQPGPIDT 181 (237)
T ss_pred cC--CCCCCcchHHhHHHHHHHHHHHHHHHhhhCeE-EEEEecCcccC
Confidence 32 25778899999999999999999999999999 77999999975
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=200.23 Aligned_cols=181 Identities=25% Similarity=0.361 Sum_probs=151.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|+++||||+++||++++++|+++|++ |++++|+.+..+.+.+. .++.++.+|++|+++++++++++.+ +++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~--~~i 72 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQ--VTATVRGPQQDTALQAL-----PGVHIEKLDMNDPASLDQLLQRLQG--QRF 72 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCE--EEEEeCCCcchHHHHhc-----cccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence 68999999999999999999999996 88899987665443221 3577889999999999999998854 589
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|++|||+|...+ ...++.+.+.+++++.+++|+.+++.+.+.++|.+.+.. +.+++++|..+..+..+
T Consensus 73 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~iv~~ss~~g~~~~~~ 140 (225)
T PRK08177 73 DLLFVNAGISGP-----AHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQ-------GVLAFMSSQLGSVELPD 140 (225)
T ss_pred CEEEEcCcccCC-----CCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcC-------CEEEEEccCccccccCC
Confidence 999999997631 124466788899999999999999999999999987542 38999999877655433
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..++..|+++|++++.|+++++.|++++||+ +|+|+||.+++
T Consensus 141 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~-v~~i~PG~i~t 182 (225)
T PRK08177 141 GGEMPLYKASKAALNSMTRSFVAELGEPTLT-VLSMHPGWVKT 182 (225)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhhcCCeE-EEEEcCCceec
Confidence 4567789999999999999999999999999 77999999875
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=202.27 Aligned_cols=181 Identities=19% Similarity=0.240 Sum_probs=155.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-hcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|+++||||++|||++++++|+++|++ |++++|+++..+...+.. ...+.++.++++|++++++++++++++.+ +
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGAR--LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---L 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCE--EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---c
Confidence 68999999999999999999999996 888899876665543333 22345899999999999999999998764 4
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|... .....+.+.+++.+.+++|+.+++.+++++.|.|.+++.+ +++++||..+..+
T Consensus 77 ~d~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~-- 141 (243)
T PRK07102 77 PDIVLIAVGTLG-------DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSG------TIVGISSVAGDRG-- 141 (243)
T ss_pred CCEEEECCcCCC-------CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC------EEEEEecccccCC--
Confidence 699999999763 4456677888999999999999999999999999877655 9999999887766
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.|+.+.||+ +++|+||.+++
T Consensus 142 -~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~-v~~v~pg~v~t 183 (243)
T PRK07102 142 -RASNYVYGSAKAALTAFLSGLRNRLFKSGVH-VLTVKPGFVRT 183 (243)
T ss_pred -CCCCcccHHHHHHHHHHHHHHHHHhhccCcE-EEEEecCcccC
Confidence 5777899999999999999999999999999 66999999864
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=201.32 Aligned_cols=186 Identities=25% Similarity=0.334 Sum_probs=162.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++|++|||||+|+||++++++|+++|++ |++++|+.+..+...+.....+.++.++.+|++++++++++++++.+++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAE--VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999996 8889998766555544444445678999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc-c
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-I 184 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~-~ 184 (231)
+++|++|||+|... ..++.+.+.++|++.++.|+.+++.+++.+++.|.+++.+ ++|++||..+. .
T Consensus 82 ~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~ss~~~~~~ 148 (251)
T PRK12826 82 GRLDILVANAGIFP-------LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGG------RIVLTSSVAGPRV 148 (251)
T ss_pred CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEechHhhcc
Confidence 99999999998763 4556678889999999999999999999999999876654 89999998776 3
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .++...|+++|++++++++.++.++.+.|++ ++.+.||.++
T Consensus 149 ~---~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~-~~~i~pg~~~ 190 (251)
T PRK12826 149 G---YPGLAHYAASKAGLVGFTRALALELAARNIT-VNSVHPGGVD 190 (251)
T ss_pred C---CCCccHHHHHHHHHHHHHHHHHHHHHHcCeE-EEEEeeCCCC
Confidence 4 5777899999999999999999999999999 5599999875
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=201.15 Aligned_cols=184 Identities=24% Similarity=0.315 Sum_probs=152.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+||||++++++|+++|++ |++.+|+.. +.+.+..+..+.++.++++|++++++++++++++.+.++..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~--V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTH--VISISRTEN--KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCE--EEEEeCCch--HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 58999999999999999999999997 888888752 12222333335678899999999999999999998766532
Q ss_pred ----cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 109 ----NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 109 ----d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.++|+|+|... +..++.+.+.++|++.+++|+.+++.+++.++|.|++.+.+ ++||++||..+..
T Consensus 78 ~~~~~~~v~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~ 146 (251)
T PRK06924 78 NVSSIHLINNAGMVA------PIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVD-----KRVINISSGAAKN 146 (251)
T ss_pred cCCceEEEEcceecc------cCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCC-----ceEEEecchhhcC
Confidence 28999999754 44567788999999999999999999999999999764321 3899999987665
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|++++++++.++.|++ +.+|+ +|+|.||.+++
T Consensus 147 ~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~-v~~v~Pg~v~t 191 (251)
T PRK06924 147 P---YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVK-IVAFSPGVMDT 191 (251)
T ss_pred C---CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeE-EEEecCCcccc
Confidence 5 67788999999999999999999975 56899 67999999874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=202.16 Aligned_cols=182 Identities=21% Similarity=0.290 Sum_probs=156.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||+++||++++++|+++|++ |++++|+.+..+.+.+... +.++.++++|+++.+++.++++++.+++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~--v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR--VLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999997 8888998766555443332 347889999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.+.+.+++.+ +++++||..+...
T Consensus 78 ~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~~-- 142 (257)
T PRK07074 78 VDVLVANAGAAR-------AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRG------AVVNIGSVNGMAA-- 142 (257)
T ss_pred CCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhhcCC--
Confidence 999999999763 3456677889999999999999999999999999876654 8999999765432
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+...|+.+|++++.++++++.|+.++|++ +|++.||.+++
T Consensus 143 --~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~-v~~v~pg~v~t 183 (257)
T PRK07074 143 --LGHPAYSAAKAGLIHYTKLLAVEYGRFGIR-ANAVAPGTVKT 183 (257)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHhHhCeE-EEEEEeCcCCc
Confidence 356689999999999999999999999999 66999999864
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=201.58 Aligned_cols=175 Identities=22% Similarity=0.215 Sum_probs=147.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||++|||++++++|+++|++ |++++|+++..+.+.+ ...++.++++|++++++++++++++.. .+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~ 72 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ--VIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IP 72 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence 68999999999999999999999997 8888998655443322 134688999999999999999888642 47
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|.+|+|+|... .....+.+.++|++++++|+.+++.+++.+.|+|.+.+ +++++||..+..+
T Consensus 73 d~~i~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~iv~isS~~~~~~--- 134 (240)
T PRK06101 73 ELWIFNAGDCE-------YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGH--------RVVIVGSIASELA--- 134 (240)
T ss_pred CEEEEcCcccc-------cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--------eEEEEechhhccC---
Confidence 99999998642 22334567889999999999999999999999986532 8999999887766
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.|+.++|++ ++++.||.+++
T Consensus 135 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~-v~~v~pg~i~t 176 (240)
T PRK06101 135 LPRAEAYGASKAAVAYFARTLQLDLRPKGIE-VVTVFPGFVAT 176 (240)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHhcCce-EEEEeCCcCCC
Confidence 6788899999999999999999999999999 56999999864
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=199.61 Aligned_cols=179 Identities=25% Similarity=0.358 Sum_probs=150.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH-HHHHc--
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS-IKEKY-- 105 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~-~~~~~-- 105 (231)
+++|||||+|+||++++++|+++|++ |++++|+.... + ....+.++.++++|+++++++++++++ +.+.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~--v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIA--VLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD 74 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCE--EEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence 37999999999999999999999997 88888875431 1 122355788999999999999998877 55544
Q ss_pred -CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 106 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+++|++|||+|... +..+..+.+.++|++.+++|+.+++.+.+.+.+.|.+.+.+ +||++||..+..
T Consensus 75 ~~~~~~~v~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~ 142 (243)
T PRK07023 75 GASRVLLINNAGTVE------PIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAER------RILHISSGAARN 142 (243)
T ss_pred CCCceEEEEcCcccC------CCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCC------EEEEEeChhhcC
Confidence 47999999999763 33556677889999999999999999999999999876554 999999988765
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|++++++++.++.+ .+.||+ +|+|+||.+++
T Consensus 143 ~---~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~-v~~v~pg~~~t 184 (243)
T PRK07023 143 A---YAGWSVYCATKAALDHHARAVALD-ANRALR-IVSLAPGVVDT 184 (243)
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHhc-CCCCcE-EEEecCCcccc
Confidence 5 678889999999999999999999 888999 66999999864
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=216.66 Aligned_cols=188 Identities=24% Similarity=0.348 Sum_probs=158.4
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
....+++|++|||||++|||++++++|+++|++ |++.+++... +.+.+..+.. ...++.+|++++++++++++.+
T Consensus 204 ~~~~~~g~~vlItGasggIG~~la~~l~~~Ga~--vi~~~~~~~~-~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~ 278 (450)
T PRK08261 204 WDRPLAGKVALVTGAARGIGAAIAEVLARDGAH--VVCLDVPAAG-EALAAVANRV--GGTALALDITAPDAPARIAEHL 278 (450)
T ss_pred cccCCCCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCccH-HHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHH
Confidence 334567999999999999999999999999997 7777774322 2233332222 2357899999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|++|||+|.. ....+.+.+.++|++.+++|+.+++.+.+++.+.+..++.+ +||++||..
T Consensus 279 ~~~~g~id~vi~~AG~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g------~iv~~SS~~ 345 (450)
T PRK08261 279 AERHGGLDIVVHNAGIT-------RDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG------RIVGVSSIS 345 (450)
T ss_pred HHhCCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC------EEEEECChh
Confidence 99999999999999986 35677888999999999999999999999999965444433 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+++++|+++++.|+.+.||+ +|+|+||.+++
T Consensus 346 ~~~g---~~~~~~Y~asKaal~~~~~~la~el~~~gi~-v~~v~PG~i~t 391 (450)
T PRK08261 346 GIAG---NRGQTNYAASKAGVIGLVQALAPLLAERGIT-INAVAPGFIET 391 (450)
T ss_pred hcCC---CCCChHHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEEeCcCcc
Confidence 8776 6788899999999999999999999999999 77999999874
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=199.46 Aligned_cols=188 Identities=23% Similarity=0.291 Sum_probs=156.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEE-eecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+|+||++++++|+++|++ |++ ..|+.+..++........+.++..+++|++|+++++++++++.+++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYT--VAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999997 554 456655555444444445667889999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|... ...++.+.+.++|+..+++|+.+++.+++.+++.+.++..+ ..+++|++||..+..+
T Consensus 80 id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~g~~v~~sS~~~~~~-- 148 (247)
T PRK09730 80 LAALVNNAGILF------TQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGG---SGGAIVNVSSAASRLG-- 148 (247)
T ss_pred CCEEEECCCCCC------CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---CCcEEEEECchhhccC--
Confidence 999999999753 34556778889999999999999999999999998765321 1148999999887766
Q ss_pred CCCC-ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGG-WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~-~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++ +..|+++|++++.+++.++.|+.+.|++ ++++.||.+++
T Consensus 149 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~-v~~i~pg~~~~ 191 (247)
T PRK09730 149 -APGEYVDYAASKGAIDTLTTGLSLEVAAQGIR-VNCVRPGFIYT 191 (247)
T ss_pred -CCCcccchHhHHHHHHHHHHHHHHHHHHhCeE-EEEEEeCCCcC
Confidence 444 4679999999999999999999999999 55999999863
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=197.87 Aligned_cols=185 Identities=24% Similarity=0.313 Sum_probs=158.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.++++++|||||+|+||++++++|+++|++ |++++|+++..+.+.+.+... .++.++.+|+++.+++.++++++.+.
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYK--VAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999997 888899876655554443332 57889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++||++|... ...+.+.+.+++++.+++|+.+++.+++++++.+.+. . +++|++||..+..
T Consensus 80 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~------~~iv~~ss~~~~~ 145 (237)
T PRK07326 80 FGGLDVLIANAGVGH-------FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-G------GYIINISSLAGTN 145 (237)
T ss_pred cCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-C------eEEEEECChhhcc
Confidence 999999999998752 4556778899999999999999999999999988432 2 3899999987665
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .++...|+++|++++++++.++.|+.+.|++ +++|.||.+.
T Consensus 146 ~---~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~-v~~v~pg~~~ 187 (237)
T PRK07326 146 F---FAGGAAYNASKFGLVGFSEAAMLDLRQYGIK-VSTIMPGSVA 187 (237)
T ss_pred C---CCCCchHHHHHHHHHHHHHHHHHHhcccCcE-EEEEeecccc
Confidence 4 5667789999999999999999999999999 6699999875
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=197.57 Aligned_cols=187 Identities=26% Similarity=0.342 Sum_probs=163.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+|+||.+++++|+++|++ |++++|+....+.+.+.....+.++.++.+|+++++++.++++++.+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAK--VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999997 899999987766655555555678999999999999999999999988
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++||++|... ..+..+.+.++|++.++.|+.+++.+++++.+.+.+.+.+ ++|++||..+..
T Consensus 80 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~------~ii~~ss~~~~~ 146 (246)
T PRK05653 80 FGALDILVNNAGITR-------DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYG------RIVNISSVSGVT 146 (246)
T ss_pred hCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECcHHhcc
Confidence 999999999999763 4556677888999999999999999999999999776654 999999987766
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .+++..|+.+|++++.++++++.++.+.+++ ++++.||.++
T Consensus 147 ~---~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~-~~~i~pg~~~ 188 (246)
T PRK05653 147 G---NPGQTNYSAAKAGVIGFTKALALELASRGIT-VNAVAPGFID 188 (246)
T ss_pred C---CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeE-EEEEEeCCcC
Confidence 5 5677889999999999999999999999999 5699999875
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=196.28 Aligned_cols=186 Identities=19% Similarity=0.237 Sum_probs=159.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+|+||++++++|+++|++ |++++|+....++..+.... ..+..+.+|++|.++++++++++.+
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGAR--VALIGRGAAPLSQTLPGVPA--DALRIGGIDLVDPQAARRAVDEVNR 78 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCe--EEEEeCChHhHHHHHHHHhh--cCceEEEeecCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 89999987665543332222 3466788999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++||++|.. ......+.+.+++++.++.|+.+++.+++++.+.+.+++.+ ++|++||..+.
T Consensus 79 ~~~~~d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~ 145 (239)
T PRK12828 79 QFGRLDALVNIAGAF-------VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGG------RIVNIGAGAAL 145 (239)
T ss_pred HhCCcCEEEECCccc-------CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCC------EEEEECchHhc
Confidence 999999999999975 23455677888999999999999999999999999876654 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .++...|+++|++++.+++.++.++.+.|++ ++.+.||.++
T Consensus 146 ~~---~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~-~~~i~pg~v~ 188 (239)
T PRK12828 146 KA---GPGMGAYAAAKAGVARLTEALAAELLDRGIT-VNAVLPSIID 188 (239)
T ss_pred cC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCccc
Confidence 55 5677899999999999999999999999999 6699999885
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=199.04 Aligned_cols=187 Identities=22% Similarity=0.311 Sum_probs=159.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.+.... .++.++.+|+++++++.++++++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGAR--VHVCDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999997 88889987655544433322 26788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+|||++|... +.....+.+.++|++.+++|+.+++.+++.+.+.+.+.+.+ ++++++||..+..
T Consensus 84 ~~~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~vv~~ss~~~~~ 152 (264)
T PRK12829 84 FGGLDVLVNNAGIAG------PTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHG-----GVIIALSSVAGRL 152 (264)
T ss_pred hCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-----eEEEEeccccccc
Confidence 999999999999763 34456677888999999999999999999999988775541 3799999887766
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .+++..|+.+|++++.+++.++.++.+.+++ ++++.||.++
T Consensus 153 ~---~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~-~~~l~pg~v~ 194 (264)
T PRK12829 153 G---YPGRTPYAASKWAVVGLVKSLAIELGPLGIR-VNAILPGIVR 194 (264)
T ss_pred C---CCCCchhHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCCcC
Confidence 6 5777889999999999999999999999999 6699999985
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=194.75 Aligned_cols=173 Identities=24% Similarity=0.306 Sum_probs=149.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||+++||++++++|+++|++ |++++|+..... . ..++.+|++++++++++++++.+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~---------~--~~~~~~D~~~~~~~~~~~~~~~~~~- 67 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQ--VIGIARSAIDDF---------P--GELFACDLADIEQTAATLAQINEIH- 67 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEEeCCccccc---------C--ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence 5789999999999999999999999996 888888765310 1 1467899999999999999998876
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.++|.|++.+.+ +||++||.. ..+
T Consensus 68 ~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~-~~~- 132 (234)
T PRK07577 68 PVDAIVNNVGIAL-------PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQG------RIVNICSRA-IFG- 132 (234)
T ss_pred CCcEEEECCCCCC-------CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcccc-ccC-
Confidence 6899999999763 4566778889999999999999999999999999876654 999999975 334
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.|+++.||+ +|+|+||.+++
T Consensus 133 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~-v~~i~pg~~~t 174 (234)
T PRK07577 133 --ALDRTSYSAAKSALVGCTRTWALELAEYGIT-VNAVAPGPIET 174 (234)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHHhhCcE-EEEEecCcccC
Confidence 5677899999999999999999999999999 66999999863
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=198.62 Aligned_cols=178 Identities=25% Similarity=0.223 Sum_probs=153.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||+|+||++++++|+++|++ |++.+|+....+.+.+.....+.++.++.+|+++++++.++++ ++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN--VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WD 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CC
Confidence 578999999999999999999999997 8888888765555555544455678999999999998876643 37
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||+|.. ...+..+.+.+.|++.+++|+.+++.+.+.+++.+.+.+.+ +||++||..+..+
T Consensus 74 id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~SS~~~~~~-- 138 (257)
T PRK09291 74 VDVLLNNAGIG-------EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG------KVVFTSSMAGLIT-- 138 (257)
T ss_pred CCEEEECCCcC-------CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEcChhhccC--
Confidence 99999999976 34567788899999999999999999999999999877655 9999999887766
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++.+++.++.++.+.||+ +++|.||.++
T Consensus 139 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~-~~~v~pg~~~ 179 (257)
T PRK09291 139 -GPFTGAYCASKHALEAIAEAMHAELKPFGIQ-VATVNPGPYL 179 (257)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHHhcCcE-EEEEecCccc
Confidence 5777899999999999999999999999999 6699999875
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=223.40 Aligned_cols=187 Identities=21% Similarity=0.268 Sum_probs=164.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..++||++|||||+|+||++++++|+++|++ |++++|+.+..+.+.+.+... .++.++.+|++++++++++++++.+
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~--Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGAC--VVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3568999999999999999999999999996 999999886665544443322 5788999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|++++.+ ++||++||..+.
T Consensus 495 ~~g~iDvvI~~AG~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~-----g~iV~vsS~~~~ 562 (681)
T PRK08324 495 AFGGVDIVVSNAGIA-------ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLG-----GSIVFIASKNAV 562 (681)
T ss_pred HcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----cEEEEECCcccc
Confidence 999999999999987 35677888999999999999999999999999999886642 399999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+ .+++..|+++|+++++++++++.|+++.||+ +|+|+||.+
T Consensus 563 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIr-vn~v~Pg~v 604 (681)
T PRK08324 563 NP---GPNFGAYGAAKAAELHLVRQLALELGPDGIR-VNGVNPDAV 604 (681)
T ss_pred CC---CCCcHHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeCcee
Confidence 66 6788899999999999999999999999999 779999988
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=196.56 Aligned_cols=184 Identities=21% Similarity=0.261 Sum_probs=159.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.++....+.++.++.+|+++.+++.++++++.+.+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGAN--VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999996 888999876666665555544668999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|... .....+.+.++++++++.|+.+++.+++.+++.|++.+.+ ++|++||..+..+
T Consensus 79 ~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~~v~~ss~~~~~~-- 143 (255)
T TIGR01963 79 LDILVNNAGIQH-------VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWG------RIINIASAHGLVA-- 143 (255)
T ss_pred CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe------EEEEEcchhhcCC--
Confidence 999999999763 3445566778899999999999999999999999776654 8999999876655
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+++..|+.+|+++++++++++.++.+.+++ ++.+.||.++
T Consensus 144 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~-v~~i~pg~v~ 184 (255)
T TIGR01963 144 -SPFKSAYVAAKHGLIGLTKVLALEVAAHGIT-VNAICPGYVR 184 (255)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCccc
Confidence 6778899999999999999999999999999 5699999875
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=193.71 Aligned_cols=186 Identities=25% Similarity=0.396 Sum_probs=158.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++.|++|||||+|+||++++++|+++|++ |++..++. ...+.+.+.....+.++.++.+|+++++++.++++++.++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGAD--VVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999997 65555543 3333344444444668899999999999999999999998
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++||++|.. +...+.+.+.++|++.+++|+.+++.+++.+.+.+.+.+.+ ++|++||..+..
T Consensus 82 ~~~id~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~i~~SS~~~~~ 148 (249)
T PRK12825 82 FGRIDILVNNAGIF-------EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGG------RIVNISSVAGLP 148 (249)
T ss_pred cCCCCEEEECCccC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEECccccCC
Confidence 99999999999965 34556677889999999999999999999999999876654 999999988775
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .++...|+.+|++++++++.++.++.+.|++ ++.+.||.++
T Consensus 149 ~---~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~-~~~i~pg~~~ 190 (249)
T PRK12825 149 G---WPGRSNYAAAKAGLVGLTKALARELAEYGIT-VNMVAPGDID 190 (249)
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEEECCcc
Confidence 5 5677889999999999999999999999999 5599999886
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=196.29 Aligned_cols=181 Identities=20% Similarity=0.238 Sum_probs=146.1
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||+|+||++++++|+++|++ |++.+|+.. ..+.+.+.++..+.++.++++|+++++++.++++++.++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAH--VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCE--EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 57899999999999999999999999997 777788653 333344434444567889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|++|||+|... .. ..++++.+++|+.+++.+++++.|.|.+. +++|++||..+..
T Consensus 82 ~~~~d~vi~~ag~~~-------~~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~~--------~~iv~isS~~~~~ 140 (248)
T PRK07806 82 FGGLDALVLNASGGM-------ES------GMDEDYAMRLNRDAQRNLARAALPLMPAG--------SRVVFVTSHQAHF 140 (248)
T ss_pred CCCCcEEEECCCCCC-------CC------CCCcceeeEeeeHHHHHHHHHHHhhccCC--------ceEEEEeCchhhc
Confidence 999999999998642 11 11245689999999999999999998543 2899999865432
Q ss_pred -CC-CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 -GD-NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 -~~-~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+. .+.+.+..|+++|++++.++++++.|+++.||+ +|+|.||.++
T Consensus 141 ~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~-v~~v~pg~~~ 187 (248)
T PRK07806 141 IPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIG-FVVVSGDMIE 187 (248)
T ss_pred CccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeE-EEEeCCcccc
Confidence 11 124556789999999999999999999999999 6699999875
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=192.74 Aligned_cols=180 Identities=28% Similarity=0.438 Sum_probs=154.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+|+||+++|++|+++|++ .|++++|+.+..+. .+.++.++.+|+++.++++++++.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~-~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~--- 70 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAA-KVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA--- 70 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcc-cEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh---
Confidence 3567899999999999999999999999993 38888988654332 356788999999999999887765
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++||++|... ....+.+.+.++|++.+++|+.+++.+++++.+.+.+.+.+ +++++||..+.
T Consensus 71 -~~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~ 137 (238)
T PRK08264 71 -ASDVTILVNNAGIFR------TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG------AIVNVLSVLSW 137 (238)
T ss_pred -cCCCCEEEECCCcCC------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcChhhc
Confidence 478999999999743 45567788899999999999999999999999999876554 89999998776
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|++++.+++.++.++.+.|++ ++++.||.+++
T Consensus 138 ~~---~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~-~~~v~pg~v~t 181 (238)
T PRK08264 138 VN---FPNLGTYSASKAAAWSLTQALRAELAPQGTR-VLGVHPGPIDT 181 (238)
T ss_pred cC---CCCchHhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeCCcccc
Confidence 55 6777899999999999999999999999999 66999998863
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=194.22 Aligned_cols=181 Identities=27% Similarity=0.359 Sum_probs=151.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|+++|||++++||+++++.|+++|++ |++++|+.+..+.+.+. ..+.++.+|++++++++++++.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~--- 74 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGAR--VVAAARNAAALDRLAGE-----TGCEPLRLDVGDDAAIRAALAA--- 74 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH-----hCCeEEEecCCCHHHHHHHHHH---
Confidence 4678999999999999999999999999996 88889986554433221 1356788999999988887765
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+++|++|||+|.. ......+.+.++|++.+++|+.+++.+++++.+.+.+.+.+ ++||++||..+.
T Consensus 75 -~~~~d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~~~ 141 (245)
T PRK07060 75 -AGAFDGLVNCAGIA-------SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRG-----GSIVNVSSQAAL 141 (245)
T ss_pred -hCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----cEEEEEccHHHc
Confidence 47899999999976 34556677888999999999999999999999998755421 399999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|++++.++++++.++.+.|++ ++++.||.+++
T Consensus 142 ~~---~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~-v~~v~pg~v~~ 185 (245)
T PRK07060 142 VG---LPDHLAYCASKAALDAITRVLCVELGPHGIR-VNSVNPTVTLT 185 (245)
T ss_pred CC---CCCCcHhHHHHHHHHHHHHHHHHHHhhhCeE-EEEEeeCCCCC
Confidence 66 5777899999999999999999999999999 66999998863
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=196.84 Aligned_cols=184 Identities=20% Similarity=0.288 Sum_probs=158.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-hcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.|++++||||+.|||++.|++||++|.+ |++++|++++++.+++++ +..+.++.++.+|.++.+++ .+++++..
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~n--vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l 122 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFN--VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKL 122 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHh
Confidence 3699999999999999999999999998 999999999999976554 45566899999999998873 33333332
Q ss_pred --CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 106 --GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 106 --g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|.+||||+|.... ....+.+.+...+++.+.+|..++..+++.++|.|.++++| .|+|++|..+.
T Consensus 123 ~~~~VgILVNNvG~~~~-----~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G------~IvnigS~ag~ 191 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYD-----YPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKG------IIVNIGSFAGL 191 (312)
T ss_pred cCCceEEEEecccccCC-----CcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCc------eEEEecccccc
Confidence 478999999998741 13456677777899999999999999999999999998887 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .|.++.|+++|+.++.++++|..|+..+||. +.++.|..|-
T Consensus 192 ~p---~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~-Vq~v~p~~Va 234 (312)
T KOG1014|consen 192 IP---TPLLSVYSASKAFVDFFSRCLQKEYESKGIF-VQSVIPYLVA 234 (312)
T ss_pred cc---ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeE-EEEeehhhee
Confidence 87 8999999999999999999999999999998 5599998763
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=190.13 Aligned_cols=182 Identities=24% Similarity=0.351 Sum_probs=156.0
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
+||||++++||.+++++|+++|++ |++.+|+. +..+.+.+.....+.++.++++|++++++++++++++.++++++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK--VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999999997 88888865 333334444444466789999999999999999999999999999
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
++||++|... .....+.+.+.+++.+++|+.+++.+++.+.+.+.+.+.+ +++++||..+..+ .
T Consensus 79 ~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~~g---~ 142 (239)
T TIGR01830 79 ILVNNAGITR-------DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSG------RIINISSVVGLMG---N 142 (239)
T ss_pred EEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEECCccccCC---C
Confidence 9999999763 3456677888999999999999999999999998765544 9999999887777 6
Q ss_pred CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 190 GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+++..|+++|++++.+++.++.++.+.|++ ++.+.||.+++
T Consensus 143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~-~~~i~pg~~~~ 183 (239)
T TIGR01830 143 AGQANYAASKAGVIGFTKSLAKELASRNIT-VNAVAPGFIDT 183 (239)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeE-EEEEEECCCCC
Confidence 778899999999999999999999999999 66999998863
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-27 Score=190.48 Aligned_cols=184 Identities=21% Similarity=0.246 Sum_probs=150.9
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhc-CCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~-~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++++|||||+|+||++++++|+++|++ |++++|+... .+.+.+.... .+..+.++.+|+++++++.++++++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYR--VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999997 8888886432 3333332222 234688999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++++.|++.+.+ +.++++++..+.
T Consensus 82 ~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~ 147 (249)
T PRK09135 82 AFGRLDALVNNASSFY-------PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-------GAIVNITDIHAE 147 (249)
T ss_pred HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-------eEEEEEeChhhc
Confidence 9999999999999763 34455667788999999999999999999999986643 378888776554
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .++...|+++|++++.++++++.++.+ +++ ++++.||.++
T Consensus 148 ~~---~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~-~~~v~pg~~~ 189 (249)
T PRK09135 148 RP---LKGYPVYCAAKAALEMLTRSLALELAP-EVR-VNAVAPGAIL 189 (249)
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHHCC-CCe-EEEEEecccc
Confidence 33 577789999999999999999999965 698 6699999875
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=188.35 Aligned_cols=183 Identities=17% Similarity=0.183 Sum_probs=152.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++||||+++||.++++.|+++|++ |++.+|+++..+.+...... ..++.++++|++++++++++++++.+.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQ--VCINSRNENKLKRMKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999997 88889987655544333322 236888999999999999999999888
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|.+|+++|... .....+ .+++++++++|+.+++.+.+.++|.+.+. + ++|++||..+..
T Consensus 79 ~~~id~ii~~ag~~~-------~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~ss~~~~~ 141 (238)
T PRK05786 79 LNAIDGLVVTVGGYV-------EDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEG--S------SIVLVSSMSGIY 141 (238)
T ss_pred hCCCCEEEEcCCCcC-------CCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcC--C------EEEEEecchhcc
Confidence 899999999998653 222332 38899999999999999999999998653 2 899999876643
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+. .+....|+++|++++.++++++.++.+.||+ +++|.||.++
T Consensus 142 ~~--~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~-v~~i~pg~v~ 184 (238)
T PRK05786 142 KA--SPDQLSYAVAKAGLAKAVEILASELLGRGIR-VNGIAPTTIS 184 (238)
T ss_pred cC--CCCchHHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCccC
Confidence 32 4666789999999999999999999999999 5599999885
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=189.52 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=141.7
Q ss_pred EEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccEE
Q 026924 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL 111 (231)
Q Consensus 32 LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~l 111 (231)
|||||+++||++++++|+++|++ |++.+|+.+..+.+.+..+. +.++.++.+|+++++++.++++++ +++|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR--VTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA----GPFDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence 69999999999999999999997 88889986555544333332 567889999999999998888764 789999
Q ss_pred EEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCC
Q 026924 112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG 191 (231)
Q Consensus 112 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~ 191 (231)
|||+|... ..++.+.+.++|++++++|+.+++.+.+ .+.+.+ . ++||+++|..+..+ .++
T Consensus 74 i~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~--~------g~iv~~ss~~~~~~---~~~ 133 (230)
T PRK07041 74 VITAADTP-------GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP--G------GSLTFVSGFAAVRP---SAS 133 (230)
T ss_pred EECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC--C------eEEEEECchhhcCC---CCc
Confidence 99999863 4556778889999999999999999999 444432 2 39999999887665 677
Q ss_pred ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 192 WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 192 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
...|+++|+++++++++++.|+.+ ++ +|+++||.+++
T Consensus 134 ~~~Y~~sK~a~~~~~~~la~e~~~--ir-v~~i~pg~~~t 170 (230)
T PRK07041 134 GVLQGAINAALEALARGLALELAP--VR-VNTVSPGLVDT 170 (230)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhC--ce-EEEEeeccccc
Confidence 889999999999999999999975 88 67999999864
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=187.67 Aligned_cols=177 Identities=24% Similarity=0.306 Sum_probs=152.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-CC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~-g~ 107 (231)
|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.+ ..+..+++|+++.+++.++++.+.+.. ++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR--VLAACRKPDDVARMNS------LGFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHhHHHHh------CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999999999999996 8888998765443321 246788999999999999999987643 78
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++|||+|... ..+..+.+.+++++.+++|+.+++.+.+.+++.+.+.+.+ ++++++|..+..+
T Consensus 75 ~~~ii~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~iv~~ss~~~~~~-- 139 (256)
T PRK08017 75 LYGLFNNAGFGV-------YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEG------RIVMTSSVMGLIS-- 139 (256)
T ss_pred CeEEEECCCCCC-------ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC------EEEEEcCcccccC--
Confidence 999999999753 3456778889999999999999999999999999877654 8999999877765
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++.++++++.++.+.+++ ++++.||.++
T Consensus 140 -~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~-v~~v~pg~~~ 180 (256)
T PRK08017 140 -TPGRGAYAASKYALEAWSDALRMELRHSGIK-VSLIEPGPIR 180 (256)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHhhcCCE-EEEEeCCCcc
Confidence 6778899999999999999999999999999 5699999875
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-27 Score=188.52 Aligned_cols=183 Identities=17% Similarity=0.211 Sum_probs=164.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.++|||+|+|||+++|+.+...|+. |-++.|+..++..+...++.. -.+|.+.++|++|.+++..+++++++.++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~--Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGAD--VTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCc--eEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 68999999999999999999999998 888889988888765554322 23488999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCccccC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~~ 185 (231)
++|.+|||||... .+.+++.+.++++..+++|+.++++++++.++.|++.. .| +|+.++|..+..+
T Consensus 112 ~~d~l~~cAG~~v-------~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g------~I~~vsS~~a~~~ 178 (331)
T KOG1210|consen 112 PIDNLFCCAGVAV-------PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLG------RIILVSSQLAMLG 178 (331)
T ss_pred CcceEEEecCccc-------ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCc------EEEEehhhhhhcC
Confidence 9999999999884 67889999999999999999999999999999998876 44 9999999999998
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
..|+++|+++|+|+.+++..++.|..++||+|. .+.|+-++
T Consensus 179 ---i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt-~~~P~~~~ 219 (331)
T KOG1210|consen 179 ---IYGYSAYSPSKFALRGLAEALRQELIKYGVHVT-LYYPPDTL 219 (331)
T ss_pred ---cccccccccHHHHHHHHHHHHHHHHhhcceEEE-EEcCCCCC
Confidence 799999999999999999999999999999944 88887665
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=181.92 Aligned_cols=178 Identities=28% Similarity=0.365 Sum_probs=142.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+++||++++++|++.|++ |++++|+.+..+.+.. ..+.++.+|+++.++++++++++.. +++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~--v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~--~~~ 71 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQA------LGAEALALDVADPASVAGLAWKLDG--EAL 71 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCE--EEEEECCHHHHHHHHh------ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence 58999999999999999999999997 8888888655443322 1356789999999999998877642 479
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|++|||+|.... ......+.+.++|++.+++|+.+++.+++++.|+|.+. . +++++++|..+..+..+
T Consensus 72 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~------g~iv~isS~~~~~~~~~ 139 (222)
T PRK06953 72 DAAVYVAGVYGP-----RTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-G------GVLAVLSSRMGSIGDAT 139 (222)
T ss_pred CEEEECCCcccC-----CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-C------CeEEEEcCccccccccc
Confidence 999999997521 12345567889999999999999999999999988653 2 38999999877665322
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
......|+++|++++.+++.++.++. +++ +|+|+||.+++
T Consensus 140 ~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~-v~~v~Pg~i~t 179 (222)
T PRK06953 140 GTTGWLYRASKAALNDALRAASLQAR--HAT-CIALHPGWVRT 179 (222)
T ss_pred CCCccccHHhHHHHHHHHHHHhhhcc--CcE-EEEECCCeeec
Confidence 22223699999999999999999874 788 67999999874
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-27 Score=180.91 Aligned_cols=186 Identities=21% Similarity=0.213 Sum_probs=155.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.+|++|+||+|.|||..++..+.+.+.. ....+++....+ ...+...+++.......|+++.....++++..+++.+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e--~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDE--ALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchH--HHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 4688999999999999999999888887 444444443333 3334444566777778899999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCccc--chhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 107 SLNLLINASGILSIPNVLQPETTL--NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
..|++|||||... +.... +..+.++|++.|+.|+++.+.+.+.++|.++++. .++.+||+||.+++.
T Consensus 82 kr~iiI~NAG~lg------dvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p-----~~~~vVnvSS~aav~ 150 (253)
T KOG1204|consen 82 KRDIIIHNAGSLG------DVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP-----VNGNVVNVSSLAAVR 150 (253)
T ss_pred ceeEEEecCCCcc------chhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC-----ccCeEEEecchhhhc
Confidence 9999999999886 33333 3788999999999999999999999999999873 113999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++|+.|+++|+|.++|.+.++.|-. ++++++ +++||.+|+
T Consensus 151 p---~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl-~~aPGvvDT 192 (253)
T KOG1204|consen 151 P---FSSWAAYCSSKAARNMYFMVLASEEP-FDVRVL-NYAPGVVDT 192 (253)
T ss_pred c---ccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEE-EccCCcccc
Confidence 7 79999999999999999999999988 899966 999999996
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=182.89 Aligned_cols=176 Identities=16% Similarity=0.157 Sum_probs=130.0
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+.++++|++|||||++|||++++++|+++|++ |++.+|+..... .... . ....++.+|+++.+++.+
T Consensus 8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~--Vi~~~r~~~~~~--~~~~-~--~~~~~~~~D~~~~~~~~~----- 75 (245)
T PRK12367 8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAK--VIGLTHSKINNS--ESND-E--SPNEWIKWECGKEESLDK----- 75 (245)
T ss_pred hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEECCchhhh--hhhc-c--CCCeEEEeeCCCHHHHHH-----
Confidence 345788999999999999999999999999997 888888762211 1111 1 122578899999987653
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC--CCcccCceEEEEecc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSA 179 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~--~~~~~~~~~iv~iss 179 (231)
.++++|++|||||... . .+.+.++|++.+++|+.+++.+++.++|.|.+++ .+ +.+++.+|
T Consensus 76 --~~~~iDilVnnAG~~~-------~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-----~~iiv~ss 138 (245)
T PRK12367 76 --QLASLDVLILNHGINP-------G---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIP-----KEIWVNTS 138 (245)
T ss_pred --hcCCCCEEEECCccCC-------c---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC-----eEEEEEec
Confidence 4578999999999642 1 2356789999999999999999999999997632 12 23444455
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHH---HHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDK---ICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~---~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ ++...|++||+|+..+. +.++.|+.+.+++ ++++.||.+++
T Consensus 139 ~a~~~~----~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~-v~~~~pg~~~t 188 (245)
T PRK12367 139 EAEIQP----ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLI-IRKLILGPFRS 188 (245)
T ss_pred ccccCC----CCCchhHHHHHHHHHHHHHHHHHHHhhcccccE-EEEecCCCccc
Confidence 444322 35567999999986544 4455566788998 66999999864
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-25 Score=169.81 Aligned_cols=188 Identities=21% Similarity=0.271 Sum_probs=160.6
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++||++||+|-. ..|+..||+.|.++|++ +.++..++ ++++ ..++.+..+. ...++||+++.+++.+++.++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe--L~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAE--LAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCE--EEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHHH
Confidence 5789999999986 69999999999999997 88887776 3343 4444444333 567899999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++++|.+|++||+-++.. ... -.+.+.+++.+.|...+++..++...+.|++.|.|.+.+ .++.++-..
T Consensus 79 ~~~~g~lD~lVHsIaFa~--k~e-l~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~gg--------SiltLtYlg 147 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAP--KEE-LKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGG--------SILTLTYLG 147 (259)
T ss_pred HHhhCcccEEEEEeccCC--hHH-hCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCC--------cEEEEEecc
Confidence 999999999999999862 111 356677899999999999999999999999999998754 899998776
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..- .|.|-..+.+|++++.-+|.++.+++++||| +|+|+.|.|++
T Consensus 148 s~r~---vPnYNvMGvAKAaLEasvRyLA~dlG~~gIR-VNaISAGPIrT 193 (259)
T COG0623 148 SERV---VPNYNVMGVAKAALEASVRYLAADLGKEGIR-VNAISAGPIRT 193 (259)
T ss_pred ceee---cCCCchhHHHHHHHHHHHHHHHHHhCccCeE-EeeecccchHH
Confidence 6555 7888889999999999999999999999999 88999999874
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-25 Score=219.30 Aligned_cols=179 Identities=16% Similarity=0.214 Sum_probs=151.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCc--------------------------------------
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGA-------------------------------------- 67 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~-------------------------------------- 67 (231)
+++++|||||++|||+++|++|+++ |++ |++++|+....
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~--viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAH--FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCE--EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence 5899999999999999999999998 575 88899982100
Q ss_pred ------c---chhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHH
Q 026924 68 ------T---GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138 (231)
Q Consensus 68 ------~---~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~ 138 (231)
. ...+.++..+.++.++.||++|.++++++++++.+. ++||+||||||.. .+..+.+.+.++|
T Consensus 2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~-------~~~~i~~~t~e~f 2145 (2582)
T TIGR02813 2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVL-------ADKHIQDKTLEEF 2145 (2582)
T ss_pred cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccC-------CCCCcccCCHHHH
Confidence 0 011122344678999999999999999999999877 6899999999987 3678899999999
Q ss_pred hhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCC
Q 026924 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGS 218 (231)
Q Consensus 139 ~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi 218 (231)
++.|++|+.|++++++++.+.+.+ +||++||+.+..+ .+++..|+++|++++++++.++.++. ++
T Consensus 2146 ~~v~~~nv~G~~~Ll~al~~~~~~----------~IV~~SSvag~~G---~~gqs~YaaAkaaL~~la~~la~~~~--~i 2210 (2582)
T TIGR02813 2146 NAVYGTKVDGLLSLLAALNAENIK----------LLALFSSAAGFYG---NTGQSDYAMSNDILNKAALQLKALNP--SA 2210 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC----------eEEEEechhhcCC---CCCcHHHHHHHHHHHHHHHHHHHHcC--Cc
Confidence 999999999999999998776542 8999999999888 68899999999999999999999885 47
Q ss_pred ceeeeccCCCCCC
Q 026924 219 SYMYSVASRHCRY 231 (231)
Q Consensus 219 ~~~~~v~pg~~~~ 231 (231)
+ +|+|+||.+|.
T Consensus 2211 r-V~sI~wG~wdt 2222 (2582)
T TIGR02813 2211 K-VMSFNWGPWDG 2222 (2582)
T ss_pred E-EEEEECCeecC
Confidence 8 67999998763
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=161.35 Aligned_cols=176 Identities=20% Similarity=0.259 Sum_probs=143.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh---hhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL---DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~---~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
|+++||||+++||++++++|+++|+. .|++.+|+....+... +..+..+.++.++.+|++++++++++++++.+++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR-HLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC-eEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999985 4777788765544321 3333446688899999999999999999999889
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|++|||+|... .....+.+.++|++.+++|+.+++.+.+.+.+ .+. +++++++|..+..+
T Consensus 80 ~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~------~~ii~~ss~~~~~~ 142 (180)
T smart00822 80 GPLRGVIHAAGVLD-------DGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPL------DFFVLFSSVAGVLG 142 (180)
T ss_pred CCeeEEEEccccCC-------ccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCc------ceEEEEccHHHhcC
Confidence 99999999999763 34566778899999999999999999998843 222 38999999887766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+++..|+++|++++.+++.+ ++.|++++ +++||.++
T Consensus 143 ---~~~~~~y~~sk~~~~~~~~~~----~~~~~~~~-~~~~g~~~ 179 (180)
T smart00822 143 ---NPGQANYAAANAFLDALAAHR----RARGLPAT-SINWGAWA 179 (180)
T ss_pred ---CCCchhhHHHHHHHHHHHHHH----HhcCCceE-EEeecccc
Confidence 577889999999999999765 45688844 99999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-24 Score=169.93 Aligned_cols=173 Identities=24% Similarity=0.306 Sum_probs=143.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.|++|||||+|+||+++++.|+++ ++ |++++|+.+..+.+.+. ...+.++.+|+++++++++++++. ++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~--V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~----~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HT--LLLGGRPAERLDELAAE----LPGATPFPVDLTDPEAIAAAVEQL----GR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CC--EEEEeCCHHHHHHHHHH----hccceEEecCCCCHHHHHHHHHhc----CC
Confidence 478999999999999999999999 76 88889986543333221 135788999999999988877654 58
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|++||++|... .....+.+.++|.+.+++|+.+++.+.+.+++.+.++. ++++++||..+..+
T Consensus 72 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~v~~ss~~~~~~-- 135 (227)
T PRK08219 72 LDVLVHNAGVAD-------LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-------GHVVFINSGAGLRA-- 135 (227)
T ss_pred CCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CeEEEEcchHhcCc--
Confidence 999999999753 34566778899999999999999999999999887754 38999999887655
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+.+|++++.+++.++.++... ++ ++++.||.++
T Consensus 136 -~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~-~~~i~pg~~~ 175 (227)
T PRK08219 136 -NPGWGSYAASKFALRALADALREEEPGN-VR-VTSVHPGRTD 175 (227)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHhcCC-ce-EEEEecCCcc
Confidence 5777899999999999999999988876 99 6699999875
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=165.80 Aligned_cols=173 Identities=17% Similarity=0.227 Sum_probs=132.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CC--ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~--~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+||||||.||||..++++|+++|.. +|++++|+. .. .+...+.++..+.++.+++||++|+++++++++++.++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~-~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGAR-RLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-S-EEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCC-EEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 7999999999999999999999987 899999983 22 2234555566688999999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
+|++|||++|.. .+..+.+.+.+++++.++..+.+.+++.+.+.+.-.+ ++|++||+.+..|
T Consensus 81 ~i~gVih~ag~~-------~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~----------~~i~~SSis~~~G- 142 (181)
T PF08659_consen 81 PIDGVIHAAGVL-------ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLD----------FFILFSSISSLLG- 142 (181)
T ss_dssp -EEEEEE--------------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTS----------EEEEEEEHHHHTT-
T ss_pred Ccceeeeeeeee-------cccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCC----------eEEEECChhHhcc-
Confidence 999999999987 4778999999999999999999999999988763322 9999999999988
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
.+++..|+++.+.++.+++..+. .|.++. +|+-|.
T Consensus 143 --~~gq~~YaaAN~~lda~a~~~~~----~g~~~~-sI~wg~ 177 (181)
T PF08659_consen 143 --GPGQSAYAAANAFLDALARQRRS----RGLPAV-SINWGA 177 (181)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHH----TTSEEE-EEEE-E
T ss_pred --CcchHhHHHHHHHHHHHHHHHHh----CCCCEE-EEEccc
Confidence 79999999999999999887544 355533 665443
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=162.84 Aligned_cols=196 Identities=24% Similarity=0.376 Sum_probs=158.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCc---cEEEEeecCCCCccch-hhhhhcCC---CceeEEEecCCChHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDK---GCVIATCRNPNGATGL-LDLKNRFP---ERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~---~~vi~~~r~~~~~~~~-~~~~~~~~---~~v~~~~~Dls~~~~v~~~~~ 99 (231)
..|++||||+++|||++||++|++.... .++++++|+-+++++. .++....+ -++.++.+|+++..++.++.+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 3589999999999999999999987654 5689999999988884 45554444 278999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCC-----------------CC---CcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVL-----------------QP---ETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~-----------------~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
+++++|+++|.+..|||++..+... .+ ....-..+.+++.+.|++|++|++++.+.+.|+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 9999999999999999987522210 00 000113556678889999999999999999999
Q ss_pred hhcCCCCcccCceEEEEeccCccccCC------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 160 LKVGGTGIERDVAVVANLSARVGSIGD------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 160 l~~~~~~~~~~~~~iv~iss~~~~~~~------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+..+.+. .+|.+||..+-... .-.+|-.+|..||.+.+-+.-.+.+.+.+-|+. .++++||.+
T Consensus 162 l~~~~~~------~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~-qyvv~pg~~ 230 (341)
T KOG1478|consen 162 LCHSDNP------QLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGIN-QYVVQPGIF 230 (341)
T ss_pred hhcCCCC------eEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchh-hhcccCcee
Confidence 9887764 89999998654321 124566799999999999999999999999998 779999975
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=173.45 Aligned_cols=174 Identities=20% Similarity=0.176 Sum_probs=126.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|+++||||+||||++++++|+++|++ |++++|+.+..+. .......++..+.+|++|++++.+.
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~--Vi~l~r~~~~l~~---~~~~~~~~v~~v~~Dvsd~~~v~~~------ 242 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAK--VVALTSNSDKITL---EINGEDLPVKTLHWQVGQEAALAEL------ 242 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHhhcCCCeEEEEeeCCCHHHHHHH------
Confidence 3568999999999999999999999999997 8888887654322 1111233567889999999876543
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++++|++|||||... ..+.+.+++++++++|+.+++.++++++|.|++++.+ ...+.++++|+ .+
T Consensus 243 -l~~IDiLInnAGi~~----------~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~--~~~~iiVn~Ss-a~- 307 (406)
T PRK07424 243 -LEKVDILIINHGINV----------HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK--ATKEVWVNTSE-AE- 307 (406)
T ss_pred -hCCCCEEEECCCcCC----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCeEEEEEcc-cc-
Confidence 468999999999652 1356778999999999999999999999999775421 00125666664 32
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.. .+..+.|++||+|+..++. ++++..+ +. +..+.||.++
T Consensus 308 ~~---~~~~~~Y~ASKaAl~~l~~-l~~~~~~--~~-I~~i~~gp~~ 347 (406)
T PRK07424 308 VN---PAFSPLYELSKRALGDLVT-LRRLDAP--CV-VRKLILGPFK 347 (406)
T ss_pred cc---CCCchHHHHHHHHHHHHHH-HHHhCCC--Cc-eEEEEeCCCc
Confidence 22 2345679999999999984 5555443 43 3366777765
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=164.47 Aligned_cols=148 Identities=22% Similarity=0.253 Sum_probs=122.5
Q ss_pred HHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCC
Q 026924 44 FAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123 (231)
Q Consensus 44 ia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~ 123 (231)
+|++|+++|++ |++.+|+.+..+ ...++++|+++.++++++++++. +++|+||||||...
T Consensus 1 ~a~~l~~~G~~--Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~---- 60 (241)
T PRK12428 1 TARLLRFLGAR--VIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG---- 60 (241)
T ss_pred ChHHHHhCCCE--EEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence 47899999997 888899865431 12457899999999999998874 68999999999641
Q ss_pred CCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-----------------
Q 026924 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----------------- 186 (231)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~----------------- 186 (231)
. ++|++.+++|+.+++.+++.++|+|.+. | +||++||..+....
T Consensus 61 ---~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PRK12428 61 ---T--------APVELVARVNFLGLRHLTEALLPRMAPG--G------AIVNVASLAGAEWPQRLELHKALAATASFDE 121 (241)
T ss_pred ---C--------CCHHHhhhhchHHHHHHHHHHHHhccCC--c------EEEEeCcHHhhccccchHHHHhhhccchHHH
Confidence 1 2478899999999999999999998643 3 99999998775310
Q ss_pred -------CCCCCccchhhhHHHHHHHHHHhh-hhccccCCceeeeccCCCCCC
Q 026924 187 -------NRLGGWHSYRASKAALNHDKICVS-GVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 -------~~~~~~~~y~~sK~a~~~~~~~l~-~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+.++...|++||+++++++++++ .|++++||+ +|+|+||.+++
T Consensus 122 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~gir-vn~v~PG~v~T 173 (241)
T PRK12428 122 GAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIR-VNCVAPGPVFT 173 (241)
T ss_pred HHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeE-EEEeecCCccC
Confidence 235677899999999999999999 999999999 77999999874
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-20 Score=156.83 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=133.6
Q ss_pred cCeEEEEecCCCchhHH--HHHHHHhcCCccEEEEeecCCCCcc------------chhhhhhcCCCceeEEEecCCChH
Q 026924 27 KGGVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRNPNGAT------------GLLDLKNRFPERLDVLQLDLTVES 92 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~a--ia~~l~~~G~~~~vi~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~Dls~~~ 92 (231)
.+|++||||+++|||++ +|+.| +.|++ ++++++..+..+ ...+..+..+..+..++||+++++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~--Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGAD--TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCe--EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 47999999999999999 89999 99997 666665322211 233344444667888999999999
Q ss_pred HHHHHHHHHHHHcCCccEEEEccccCCCCC---------CCCC-----C-------------cccchhchHHHhhhhhhh
Q 026924 93 TIEASAKSIKEKYGSLNLLINASGILSIPN---------VLQP-----E-------------TTLNKVEKSSLMLAYEVN 145 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~---------~~~~-----~-------------~~~~~~~~~~~~~~~~~n 145 (231)
+++++++++.+++|+||+||||++...... +.+| . .++...+.++++.++.+.
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vM 196 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVM 196 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhh
Confidence 999999999999999999999999763110 0000 0 011123333443333222
Q ss_pred hh---HHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCc--cchhhhHHHHHHHHHHhhhhccccCCce
Q 026924 146 AV---GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNHDKICVSGVWSKEGSSY 220 (231)
Q Consensus 146 ~~---~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~~ 220 (231)
=. -.|.=.+...+.|.+. ++++.+|...+... .|.| ...+.+|++++.-++.|+.++++.|+|
T Consensus 197 ggedw~~Wi~al~~a~lla~g--------~~~va~TY~G~~~t---~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gir- 264 (398)
T PRK13656 197 GGEDWELWIDALDEAGVLAEG--------AKTVAYSYIGPELT---HPIYWDGTIGKAKKDLDRTALALNEKLAAKGGD- 264 (398)
T ss_pred ccchHHHHHHHHHhcccccCC--------cEEEEEecCCccee---ecccCCchHHHHHHHHHHHHHHHHHHhhhcCCE-
Confidence 11 1233355556666543 38999998765544 4444 367999999999999999999999999
Q ss_pred eeeccCCCCCC
Q 026924 221 MYSVASRHCRY 231 (231)
Q Consensus 221 ~~~v~pg~~~~ 231 (231)
+|++.+|.+.+
T Consensus 265 an~i~~g~~~T 275 (398)
T PRK13656 265 AYVSVLKAVVT 275 (398)
T ss_pred EEEEecCcccc
Confidence 88999998764
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=144.24 Aligned_cols=151 Identities=14% Similarity=0.217 Sum_probs=115.9
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+.+++++|+++||||++|||+++++.|+++|++ |++.+|+.+..+...+.+...+.++.++++|++++++++++++++
T Consensus 10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~ 87 (169)
T PRK06720 10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAK--VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISIT 87 (169)
T ss_pred cccccCCCEEEEecCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999996 888898876655544444444567788999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC-cccCceEEEEeccC
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG-IERDVAVVANLSAR 180 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-~~~~~~~iv~iss~ 180 (231)
.+.+|++|++|||||... ...++.+.+.++ ++ ..|+.+.++.++.+.+.|.+++.. .....+++..+|+.
T Consensus 88 ~~~~G~iDilVnnAG~~~------~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (169)
T PRK06720 88 LNAFSRIDMLFQNAGLYK------IDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTK 158 (169)
T ss_pred HHHcCCCCEEEECCCcCC------CCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccc
Confidence 999999999999999864 334444444444 33 677788888889888888776432 11244577778876
Q ss_pred ccc
Q 026924 181 VGS 183 (231)
Q Consensus 181 ~~~ 183 (231)
...
T Consensus 159 ~~~ 161 (169)
T PRK06720 159 GQS 161 (169)
T ss_pred ccc
Confidence 543
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=157.76 Aligned_cols=165 Identities=16% Similarity=0.183 Sum_probs=125.9
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++||++|||||+|+||++++++|+++| + .|++.+|+....+.+.+... ..++.++.+|++|.+++.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~--~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~---- 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPK--KIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR---- 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCc--EEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh----
Confidence 468999999999999999999999987 4 48888887544333322221 2468899999999998877664
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+|||+||... .+..+. +.++.+++|+.+++++++++.+. +.+ +||++||....
T Consensus 74 ---~iD~Vih~Ag~~~--------~~~~~~---~~~~~~~~Nv~g~~~ll~aa~~~----~~~------~iV~~SS~~~~ 129 (324)
T TIGR03589 74 ---GVDYVVHAAALKQ--------VPAAEY---NPFECIRTNINGAQNVIDAAIDN----GVK------RVVALSTDKAA 129 (324)
T ss_pred ---cCCEEEECcccCC--------Cchhhc---CHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEEeCCCCC
Confidence 4899999999642 111222 23468999999999999998753 222 89999986432
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+..+|+++|++.+.+++.++.+.++.|++ ++++.||.+
T Consensus 130 ------~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~-~~~lR~g~v 168 (324)
T TIGR03589 130 ------NPINLYGATKLASDKLFVAANNISGSKGTR-FSVVRYGNV 168 (324)
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHhhccccCcE-EEEEeecce
Confidence 223579999999999999999888889999 559999876
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=153.97 Aligned_cols=175 Identities=17% Similarity=0.261 Sum_probs=129.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++||++|||||+|+||++++++|+++|++ |++++|+............ .+.++.++.+|+++.+++.+++++.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~---- 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAE--VYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF---- 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCE--EEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc----
Confidence 46899999999999999999999999997 8888887655433322222 1346778999999999998888864
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc-
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI- 184 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~- 184 (231)
++|+|||+|+... ...+.+++.+.+++|+.+++.+++++.+. ... .++|++||.....
T Consensus 75 -~~d~vih~A~~~~-----------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~------~~iv~~SS~~vyg~ 133 (349)
T TIGR02622 75 -KPEIVFHLAAQPL-----------VRKSYADPLETFETNVMGTVNLLEAIRAI---GSV------KAVVNVTSDKCYRN 133 (349)
T ss_pred -CCCEEEECCcccc-----------cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCC------CEEEEEechhhhCC
Confidence 6899999998531 12334556778999999999999987532 111 2899999863221
Q ss_pred --------CCCCCCCccchhhhHHHHHHHHHHhhhhccc----cCCceeeeccCCCC
Q 026924 185 --------GDNRLGGWHSYRASKAALNHDKICVSGVWSK----EGSSYMYSVASRHC 229 (231)
Q Consensus 185 --------~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~----~gi~~~~~v~pg~~ 229 (231)
...+..+..+|+.+|.+.+.+++.++.++.+ +|++++ ++-|+.+
T Consensus 134 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~-~lR~~~v 189 (349)
T TIGR02622 134 DEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIA-SARAGNV 189 (349)
T ss_pred CCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEE-EEccCcc
Confidence 0112234568999999999999999988755 488844 7777654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=144.56 Aligned_cols=170 Identities=18% Similarity=0.124 Sum_probs=122.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh--cCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||+|+||++++++|+++|++ |+++.|+....+....... ....++.++.+|++++++++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYT--INATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID----- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----
Confidence 4789999999999999999999999997 7777787655443322221 112478899999999998877765
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++|+|||+||... ...+.+.+++.+++|+.+++++++++.+.+. . ++||++||..+..
T Consensus 77 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~---~------~~iv~~SS~~~~~ 134 (325)
T PLN02989 77 --GCETVFHTASPVA-----------ITVKTDPQVELINPAVNGTINVLRTCTKVSS---V------KRVILTSSMAAVL 134 (325)
T ss_pred --CCCEEEEeCCCCC-----------CCCCCChHHHHHHHHHHHHHHHHHHHHHcCC---c------eEEEEecchhhee
Confidence 4799999998542 1223345778899999999999999887542 1 2899999976543
Q ss_pred CCC-------------C-CC-----CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GDN-------------R-LG-----GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~~-------------~-~~-----~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+.. + .| ....|+.+|.+.+.+++.++.+. |++++ .+-|+.+
T Consensus 135 ~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~-ilR~~~v 194 (325)
T PLN02989 135 APETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLI-VLNPGLV 194 (325)
T ss_pred cCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEE-EEcCCce
Confidence 210 0 00 12469999999999998886654 56633 5555543
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-18 Score=152.05 Aligned_cols=168 Identities=14% Similarity=0.110 Sum_probs=126.8
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc---------CCCceeEEEecCCChHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---------FPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~---------~~~~v~~~~~Dls~~~~v~~ 96 (231)
.+||++|||||+|+||++++++|++.|++ |++++|+.+..+.+.+.+.. ...++.++.+|+++.+++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~--Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 46899999999999999999999999997 88889987766554332211 12368899999999887754
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
.++++|+||||+|... . ...+|...+++|+.++.++++++... +.+ +||+
T Consensus 156 -------aLggiDiVVn~AG~~~-------~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVg------RIV~ 205 (576)
T PLN03209 156 -------ALGNASVVICCIGASE-------K------EVFDVTGPYRIDYLATKNLVDAATVA----KVN------HFIL 205 (576)
T ss_pred -------HhcCCCEEEEcccccc-------c------cccchhhHHHHHHHHHHHHHHHHHHh----CCC------EEEE
Confidence 3467999999998642 1 11246677899999999999987643 222 9999
Q ss_pred eccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 177 LSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 177 iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+||..+.... .+.. .|. +|+++..+.+.+..++.+.||+ +|.|.||.++
T Consensus 206 VSSiga~~~g--~p~~-~~~-sk~~~~~~KraaE~~L~~sGIr-vTIVRPG~L~ 254 (576)
T PLN03209 206 VTSLGTNKVG--FPAA-ILN-LFWGVLCWKRKAEEALIASGLP-YTIVRPGGME 254 (576)
T ss_pred EccchhcccC--cccc-chh-hHHHHHHHHHHHHHHHHHcCCC-EEEEECCeec
Confidence 9998653211 2221 244 7888888999999999999999 6699999874
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=143.98 Aligned_cols=180 Identities=14% Similarity=0.089 Sum_probs=126.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhh---hcCCCceeEEEecCCChHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLK---NRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~---~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++++|++|||||+|+||++++++|+++|++ |++++|+.... +.+.... ...+.++.++.+|++|.+++.++++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYE--VHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCE--EEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 567899999999999999999999999997 87777765421 1122111 1123468899999999999998888
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
.. .+|+|||+|+... . ....+..+..+++|+.++..+++++.+...+++. ..++|++||
T Consensus 81 ~~-----~~d~Vih~A~~~~-------~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~-----~~~~v~~Ss 139 (340)
T PLN02653 81 DI-----KPDEVYNLAAQSH-------V----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGR-----QIKYYQAGS 139 (340)
T ss_pred Hc-----CCCEEEECCcccc-------h----hhhhhChhHHHHHHHHHHHHHHHHHHHhcccccc-----ceeEEEecc
Confidence 75 5899999999642 1 1222344667899999999999999887654321 126777776
Q ss_pred CccccCCC--------CCCCccchhhhHHHHHHHHHHhhhhcccc--CCceeeeccCCC
Q 026924 180 RVGSIGDN--------RLGGWHSYRASKAALNHDKICVSGVWSKE--GSSYMYSVASRH 228 (231)
Q Consensus 180 ~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~--gi~~~~~v~pg~ 228 (231)
.. .++.. +..+...|+.||.+.+.+++.++.+++-. ..++.|.+.|+.
T Consensus 140 ~~-vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 197 (340)
T PLN02653 140 SE-MYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR 197 (340)
T ss_pred HH-HhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence 42 23321 12235579999999999999998876421 112345666653
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=144.32 Aligned_cols=172 Identities=14% Similarity=0.117 Sum_probs=119.4
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC---C----cc----------chhhhhhcCCCceeE
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---G----AT----------GLLDLKNRFPERLDV 83 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~---~----~~----------~~~~~~~~~~~~v~~ 83 (231)
..+.++++|++|||||+|+||++++++|+++|++ |+++++... . .+ .+.......+.++.+
T Consensus 40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~ 117 (442)
T PLN02572 40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYE--VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIEL 117 (442)
T ss_pred CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceE
Confidence 3344778999999999999999999999999997 777664211 1 00 010001111346889
Q ss_pred EEecCCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC
Q 026924 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG 163 (231)
Q Consensus 84 ~~~Dls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~ 163 (231)
+.+|++|.+.+.+++++. ++|+|||+|+.. .......+.++++..+++|+.+++++++++...-.+
T Consensus 118 v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~--------~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~- 183 (442)
T PLN02572 118 YVGDICDFEFLSEAFKSF-----EPDAVVHFGEQR--------SAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD- 183 (442)
T ss_pred EECCCCCHHHHHHHHHhC-----CCCEEEECCCcc--------cChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 999999999998888874 689999999753 122334444566778899999999999988654211
Q ss_pred CCCcccCceEEEEeccCccccCCC----------------------CCCCccchhhhHHHHHHHHHHhhhhccccCCce
Q 026924 164 GTGIERDVAVVANLSARVGSIGDN----------------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSY 220 (231)
Q Consensus 164 ~~~~~~~~~~iv~iss~~~~~~~~----------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~ 220 (231)
.++|++||.. .++.. +......|+.+|.+.+.+++.++..+ |+++
T Consensus 184 --------~~~V~~SS~~-vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~ 250 (442)
T PLN02572 184 --------CHLVKLGTMG-EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRA 250 (442)
T ss_pred --------ccEEEEecce-ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCE
Confidence 1788888764 22210 11223579999999999998876653 5553
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.2e-17 Score=136.58 Aligned_cols=170 Identities=19% Similarity=0.107 Sum_probs=121.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh--cCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
-.||++|||||+|+||.+++++|+++|++ |++..|+....+...+... ....++.++.+|+++++++.++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 76 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYT--VKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE---- 76 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh----
Confidence 35789999999999999999999999997 8777887665444333222 113478899999999988877765
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|+|||+|+... . .. .+.+.+.+++|+.++.++++++.... +. .+||++||..+.
T Consensus 77 ---~~d~vih~A~~~~-------~-~~----~~~~~~~~~~nv~gt~~ll~~~~~~~---~v------~rvV~~SS~~~~ 132 (322)
T PLN02986 77 ---GCDAVFHTASPVF-------F-TV----KDPQTELIDPALKGTINVLNTCKETP---SV------KRVILTSSTAAV 132 (322)
T ss_pred ---CCCEEEEeCCCcC-------C-CC----CCchhhhhHHHHHHHHHHHHHHHhcC---Cc------cEEEEecchhhe
Confidence 4799999998531 1 00 11234678999999999999875431 11 289999997643
Q ss_pred c-CCCC-------------CC-----CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 I-GDNR-------------LG-----GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~-~~~~-------------~~-----~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
. +..+ .| ....|+.||.+.+.+++.+.++. |++++ ++.|+.+
T Consensus 133 ~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~-~lrp~~v 193 (322)
T PLN02986 133 LFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMV-VLNPGFI 193 (322)
T ss_pred ecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEE-EEcccce
Confidence 2 2100 01 13469999999999998876654 78744 7888765
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.9e-17 Score=137.52 Aligned_cols=159 Identities=16% Similarity=0.140 Sum_probs=113.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhhh----cCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~~----~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
|++|||||+|+||++++++|++.|++ |++++|+.... +.+..... ..+.++.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYE--VHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCE--EEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-
Confidence 58999999999999999999999997 88888875421 11211111 11346889999999999998888875
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|||+|+... .. ...+.....+++|+.++..+++++.+.-.+.. .++|++||..
T Consensus 78 ----~~d~ViH~Aa~~~-------~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~-------~~~v~~SS~~- 134 (343)
T TIGR01472 78 ----KPTEIYNLAAQSH-------VK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKS-------VKFYQASTSE- 134 (343)
T ss_pred ----CCCEEEECCcccc-------cc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcC-------eeEEEeccHH-
Confidence 5899999999642 11 11122345678899999999999876421111 1788888853
Q ss_pred ccCC---------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 183 SIGD---------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 183 ~~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.++. .+..+...|+.||.+.+.+++.++.++
T Consensus 135 vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 174 (343)
T TIGR01472 135 LYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY 174 (343)
T ss_pred hhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 2221 122345689999999999999988765
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=136.46 Aligned_cols=163 Identities=13% Similarity=0.137 Sum_probs=113.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+|+||+++++.|+++|++ .+++.++.... ........ ....++.++.+|++|.+++++++++. +
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence 47999999999999999999999987 34455554321 11111111 11246788899999999998887752 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhh---cCCCCcccCceEEEEeccCcccc
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+|||+||... .+.+.+++++.+++|+.++..+++++.+.+. ....+ ..++|++||..- +
T Consensus 75 ~D~Vih~A~~~~-----------~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~----~~~~i~~SS~~v-y 138 (355)
T PRK10217 75 PDCVMHLAAESH-----------VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS----AFRFHHISTDEV-Y 138 (355)
T ss_pred CCEEEECCcccC-----------cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC----ceEEEEecchhh-c
Confidence 899999998542 1233456788999999999999999987532 11100 138888888531 1
Q ss_pred C-----------CCCCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 185 G-----------DNRLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 185 ~-----------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
+ ..+..+...|+.||.+.+.+++.++.++.
T Consensus 139 g~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~ 179 (355)
T PRK10217 139 GDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179 (355)
T ss_pred CCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence 1 11223456799999999999999877753
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.8e-17 Score=136.63 Aligned_cols=165 Identities=19% Similarity=0.099 Sum_probs=118.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch-hhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||+|.||++++++|+++|++ |.+++|+....... .........++.++.+|+++.+++.++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYT--VKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID----- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----
Confidence 36789999999999999999999999997 87788875532221 11111122468889999999988877665
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|+|||+|+... +++++.+++|+.++.++++++... +. .++|++||..+.+
T Consensus 81 --~~d~Vih~A~~~~----------------~~~~~~~~~nv~gt~~ll~aa~~~----~v------~r~V~~SS~~avy 132 (342)
T PLN02214 81 --GCDGVFHTASPVT----------------DDPEQMVEPAVNGAKFVINAAAEA----KV------KRVVITSSIGAVY 132 (342)
T ss_pred --cCCEEEEecCCCC----------------CCHHHHHHHHHHHHHHHHHHHHhc----CC------CEEEEeccceeee
Confidence 4799999998421 234678999999999999998643 22 2899999976554
Q ss_pred CCCC------------------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GDNR------------------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~~~------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+... ......|+.+|.+.+.+++.++.+. |++++ .+.|+.|
T Consensus 133 g~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v-~lRp~~v 191 (342)
T PLN02214 133 MDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLV-VLNPVLV 191 (342)
T ss_pred ccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEE-EEeCCce
Confidence 3110 0023469999999999998887664 66644 6666543
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=135.19 Aligned_cols=165 Identities=19% Similarity=0.160 Sum_probs=113.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++++|||||+|.||++++++|+++|++ |++++|+.+..+.+...... +.++.++.+|+++.+++.++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------- 78 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYT--VHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------- 78 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------
Confidence 5789999999999999999999999997 77778876544333322222 3578899999999988877654
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHH--hhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSL--MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|+|||+|+... ........+.+.+ ...+++|+.++..+++++.+... . .++|++||.....
T Consensus 79 ~~d~Vih~A~~~~------~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~---~------~~~v~~SS~~vyg 143 (353)
T PLN02896 79 GCDGVFHVAASME------FDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKT---V------KRVVFTSSISTLT 143 (353)
T ss_pred CCCEEEECCcccc------CCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCC---c------cEEEEEechhhcc
Confidence 4799999999653 1110111222222 34667788999999999875431 1 2899999864331
Q ss_pred CCC---------------C-------CCCccchhhhHHHHHHHHHHhhhhccccCCc
Q 026924 185 GDN---------------R-------LGGWHSYRASKAALNHDKICVSGVWSKEGSS 219 (231)
Q Consensus 185 ~~~---------------~-------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~ 219 (231)
... + .+...+|+.||.+.+.+++.++.++ |++
T Consensus 144 ~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 197 (353)
T PLN02896 144 AKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GID 197 (353)
T ss_pred ccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCe
Confidence 100 0 0122379999999999999887654 555
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=135.17 Aligned_cols=169 Identities=18% Similarity=0.151 Sum_probs=119.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc--CCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
..|++|||||+|.||++++++|+++|++ |++.+|+....+.+...... ...++.++.+|+++.+.+.++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~----- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR----- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCE--EEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-----
Confidence 4578999999999999999999999997 87778876554443332211 12368889999999988776664
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|+|||+|+... . .. .+.+++.+++|+.++.++++++.+.... .+||++||.....
T Consensus 77 --~~d~ViH~A~~~~-------~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~~---------~r~v~~SS~~~~~ 133 (351)
T PLN02650 77 --GCTGVFHVATPMD-------F---ES--KDPENEVIKPTVNGMLSIMKACAKAKTV---------RRIVFTSSAGTVN 133 (351)
T ss_pred --CCCEEEEeCCCCC-------C---CC--CCchhhhhhHHHHHHHHHHHHHHhcCCc---------eEEEEecchhhcc
Confidence 4799999998531 1 11 1223567899999999999998765311 2899999874332
Q ss_pred CC---CC----C------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GD---NR----L------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~---~~----~------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+. .+ . ....+|+.||.+.+.+++.++.+ +|++++ .+.|+.+
T Consensus 134 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~-ilRp~~v 193 (351)
T PLN02650 134 VEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFI-SIIPTLV 193 (351)
T ss_pred cCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEE-EECCCce
Confidence 10 00 0 01237999999999999988765 377744 6666643
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=133.83 Aligned_cols=167 Identities=17% Similarity=0.102 Sum_probs=115.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh--hhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~--~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++++|||||+|.||++++++|+++|++ |+++.|+.......... ... ..++.++.+|++|++++.++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~---- 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYA--VNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA---- 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCE--EEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh----
Confidence 46789999999999999999999999997 77777775443222111 111 1368889999999988776654
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+|||+|+... . . ..+.+.+.+++|+.++..+++++.+.. +. .++|++||....
T Consensus 80 ---~~d~vih~A~~~~-------~---~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~------~~~v~~SS~~~~ 135 (338)
T PLN00198 80 ---GCDLVFHVATPVN-------F---A--SEDPENDMIKPAIQGVHNVLKACAKAK---SV------KRVILTSSAAAV 135 (338)
T ss_pred ---cCCEEEEeCCCCc-------c---C--CCChHHHHHHHHHHHHHHHHHHHHhcC---Cc------cEEEEeecceee
Confidence 5799999998421 1 1 112234568999999999999986542 11 289999987543
Q ss_pred cCCC---------------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 184 IGDN---------------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 184 ~~~~---------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
.... +.+...+|+.||.+.+.+++.++.++ |++++ .+-|+
T Consensus 136 g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~-~~R~~ 196 (338)
T PLN00198 136 SINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLI-TVIPT 196 (338)
T ss_pred eccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEE-EEeCC
Confidence 2100 11234469999999999999887653 56633 44443
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=138.34 Aligned_cols=160 Identities=18% Similarity=0.128 Sum_probs=132.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CC-CceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
-++||++|||||+|.||.++|+++++.+.+ .+++.++++.+...+..++.. .+ .+..++-+|++|.+.++++++..
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~-~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~- 324 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPK-EIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH- 324 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCC-EEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence 458999999999999999999999999998 899999999888876655443 33 58889999999999999998875
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|+|+|+.-. -++.+ ..+.+.+.+|+.|+.++++++...-.+ .+|++|+.-+
T Consensus 325 ----kvd~VfHAAA~KH--------VPl~E---~nP~Eai~tNV~GT~nv~~aa~~~~V~----------~~V~iSTDKA 379 (588)
T COG1086 325 ----KVDIVFHAAALKH--------VPLVE---YNPEEAIKTNVLGTENVAEAAIKNGVK----------KFVLISTDKA 379 (588)
T ss_pred ----CCceEEEhhhhcc--------Ccchh---cCHHHHHHHhhHhHHHHHHHHHHhCCC----------EEEEEecCcc
Confidence 7999999998642 33333 345578999999999999999765443 8999999888
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEG 217 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~g 217 (231)
..+. ..|+++|...+.++++++......+
T Consensus 380 V~Pt------NvmGaTKr~aE~~~~a~~~~~~~~~ 408 (588)
T COG1086 380 VNPT------NVMGATKRLAEKLFQAANRNVSGTG 408 (588)
T ss_pred cCCc------hHhhHHHHHHHHHHHHHhhccCCCC
Confidence 7652 3799999999999999988766433
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-16 Score=131.00 Aligned_cols=168 Identities=18% Similarity=0.086 Sum_probs=117.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||+|+||++++++|+++|++ |+++.|+....+. ........+.++.++.+|++|.+++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~--V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~----- 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYT--VHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK----- 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence 4689999999999999999999999997 8777886432221 111111123478889999999988765443
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
..|+++|.++... . .. ..+++.+++|+.+++++++++.+.+. . ++||++||..+..
T Consensus 78 --~~d~v~~~~~~~~-------~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~~---v------~riV~~SS~~a~~ 133 (297)
T PLN02583 78 --GCSGLFCCFDPPS-------D-----YP-SYDEKMVDVEVRAAHNVLEACAQTDT---I------EKVVFTSSLTAVI 133 (297)
T ss_pred --CCCEEEEeCccCC-------c-----cc-ccHHHHHHHHHHHHHHHHHHHHhcCC---c------cEEEEecchHhee
Confidence 5788888665321 1 11 23568899999999999999987642 1 2899999986542
Q ss_pred -C-CC-C----CC--Cc----------cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 -G-DN-R----LG--GW----------HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 -~-~~-~----~~--~~----------~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+ .. + .. .+ ..|+.||...+.++..++++ +|++++ ++.|+.|
T Consensus 134 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v-~lrp~~v 193 (297)
T PLN02583 134 WRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMV-SINAGLL 193 (297)
T ss_pred cccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEE-EEcCCcc
Confidence 1 00 0 00 01 15999999999999877654 488844 9999876
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=125.37 Aligned_cols=159 Identities=17% Similarity=0.166 Sum_probs=123.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC--CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++|||||.|.||.++++.++++....+|+..|+= ....+.+..... ..++.|++.|+.|.+.+.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~----- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED--SPRYRFVQGDICDRELVDRLFKEY----- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc--CCCceEEeccccCHHHHHHHHHhc-----
Confidence 46899999999999999999998765457887763 233333433332 358999999999999999988874
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc--ccc
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSI 184 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~--~~~ 184 (231)
.+|++||-|+-. ..+.+..+....+++|+.|++.+++++..+... .+++.+|+.. |..
T Consensus 74 ~~D~VvhfAAES-----------HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---------frf~HISTDEVYG~l 133 (340)
T COG1088 74 QPDAVVHFAAES-----------HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---------FRFHHISTDEVYGDL 133 (340)
T ss_pred CCCeEEEechhc-----------cccccccChhhhhhcchHHHHHHHHHHHHhccc---------ceEEEeccccccccc
Confidence 799999999843 356667777889999999999999999877653 2788888642 222
Q ss_pred C--------CCCCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 185 G--------DNRLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 185 ~--------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
+ ..|..+.++|+||||+-+.+++++.+.++
T Consensus 134 ~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYg 171 (340)
T COG1088 134 GLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYG 171 (340)
T ss_pred cCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcC
Confidence 1 12445667999999999999999999883
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=7e-16 Score=131.58 Aligned_cols=159 Identities=21% Similarity=0.224 Sum_probs=114.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc----hhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+++|++|||||+|+||++++++|+++|++ |++.+|....... +.+.....+.++.++.+|+++++++.+++++
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYK--VVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence 467899999999999999999999999996 7777765432221 1111111234688899999999999888775
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
. ++|+|||+|+... .. .+.+++.+.+++|+.++..+++++.. .+. .++|++||.
T Consensus 80 ~-----~~d~vih~a~~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~------~~~v~~Ss~ 133 (352)
T PLN02240 80 T-----RFDAVIHFAGLKA-------VG----ESVAKPLLYYDNNLVGTINLLEVMAK----HGC------KKLVFSSSA 133 (352)
T ss_pred C-----CCCEEEEccccCC-------cc----ccccCHHHHHHHHHHHHHHHHHHHHH----cCC------CEEEEEccH
Confidence 3 7999999998642 11 12245667899999999999987643 222 289999985
Q ss_pred ccccCC---------CCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 181 VGSIGD---------NRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 181 ~~~~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
. .++. .+..+...|+.+|.+.+.+++.++.+
T Consensus 134 ~-vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 173 (352)
T PLN02240 134 T-VYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHAS 173 (352)
T ss_pred H-HhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3 3221 12234568999999999999988755
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.2e-16 Score=128.33 Aligned_cols=169 Identities=18% Similarity=0.155 Sum_probs=125.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch--hhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL--LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~--~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|+||||+|.||.+|+++|+++||. |..+.|+++..+.. ...+...+.+...+..|+++++++.+.++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~--V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g---- 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYT--VRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG---- 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCE--EEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC----
Confidence 6789999999999999999999999996 99999998885552 333344466799999999999999888874
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.|+|+|.|.... ....+ .-.+.++..+.|+.++++++...- .- .+||+.||.++..
T Consensus 79 ---cdgVfH~Asp~~--------~~~~~----~e~~li~pav~Gt~nVL~ac~~~~---sV------krvV~TSS~aAv~ 134 (327)
T KOG1502|consen 79 ---CDGVFHTASPVD--------FDLED----PEKELIDPAVKGTKNVLEACKKTK---SV------KRVVYTSSTAAVR 134 (327)
T ss_pred ---CCEEEEeCccCC--------CCCCC----cHHhhhhHHHHHHHHHHHHHhccC---Cc------ceEEEeccHHHhc
Confidence 799999998542 11111 113689999999999999986543 11 2999999998876
Q ss_pred CC-C-CCC-------Cc----------cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GD-N-RLG-------GW----------HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~-~-~~~-------~~----------~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.. . ..+ .| ..|..||..-+..+..++.|. |+..+ +|+|+.|
T Consensus 135 ~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv-~inP~lV 194 (327)
T KOG1502|consen 135 YNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLV-TINPGLV 194 (327)
T ss_pred cCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEE-EecCCce
Confidence 42 0 000 11 147777777776666666555 67766 9999976
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-16 Score=130.38 Aligned_cols=156 Identities=17% Similarity=0.118 Sum_probs=112.9
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cC-CCcee----EEEecCCChHHHHHHHHHHHHH
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RF-PERLD----VLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~-~~~v~----~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|||||+|.||+++|++|++.+.+ .+++.++++..+-.+..++. .. +.++. .+.+|++|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~-~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~--- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPK-KLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY--- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-S-EEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-----
T ss_pred CEEEccccHHHHHHHHHHHhcCCC-eEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc---
Confidence 699999999999999999999987 79999999888777655553 22 22343 4578999999999888865
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++|+|+|.|+.- .-++.+ ....+.+.+|+.|+.++++++..+-.+ ++|++|+.-+..
T Consensus 77 --~pdiVfHaAA~K--------hVpl~E---~~p~eav~tNv~GT~nv~~aa~~~~v~----------~~v~ISTDKAv~ 133 (293)
T PF02719_consen 77 --KPDIVFHAAALK--------HVPLME---DNPFEAVKTNVLGTQNVAEAAIEHGVE----------RFVFISTDKAVN 133 (293)
T ss_dssp --T-SEEEE--------------HHHHC---CCHHHHHHHHCHHHHHHHHHHHHTT-S----------EEEEEEECGCSS
T ss_pred --CCCEEEEChhcC--------CCChHH---hCHHHHHHHHHHHHHHHHHHHHHcCCC----------EEEEccccccCC
Confidence 899999999864 223333 355678999999999999999876433 999999987764
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCc
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSS 219 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~ 219 (231)
+ -..|+++|...+.++.+.+......+.+
T Consensus 134 P------tnvmGatKrlaE~l~~~~~~~~~~~~t~ 162 (293)
T PF02719_consen 134 P------TNVMGATKRLAEKLVQAANQYSGNSDTK 162 (293)
T ss_dssp --------SHHHHHHHHHHHHHHHHCCTSSSS--E
T ss_pred C------CcHHHHHHHHHHHHHHHHhhhCCCCCcE
Confidence 4 2479999999999999999988555444
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=126.10 Aligned_cols=167 Identities=17% Similarity=0.138 Sum_probs=114.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++|||||+|+||.+++++|++.|....|++.+|... ..+.+..... ..++.++.+|+++++++.++++.. +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--NPRYRFVKGDIGDRELVSRLFTEH-----Q 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence 489999999999999999999873214777766321 1111222111 236788999999999998887753 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc--C
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI--G 185 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~--~ 185 (231)
+|+|||+++... .+.+.+.++..+++|+.++..+++++...+.+ .+++++||..... .
T Consensus 74 ~d~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~i~~Ss~~v~g~~~ 133 (317)
T TIGR01181 74 PDAVVHFAAESH-----------VDRSISGPAAFIETNVVGTYTLLEAVRKYWHE---------FRFHHISTDEVYGDLE 133 (317)
T ss_pred CCEEEEcccccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC---------ceEEEeeccceeCCCC
Confidence 899999998642 12233456678999999999999988665432 2788888853211 0
Q ss_pred -------CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 186 -------DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 186 -------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
..+......|+.+|.+.+.+++.++.+. +++++ .+-|+
T Consensus 134 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~-i~R~~ 178 (317)
T TIGR01181 134 KGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPAL-ITRCS 178 (317)
T ss_pred CCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeE-EEEec
Confidence 0112234579999999999999887654 55533 44444
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=127.53 Aligned_cols=169 Identities=18% Similarity=0.158 Sum_probs=116.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh--cCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||+|.||++++++|+++|++ |++++|+............ ....++.++.+|+++.+.+.++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYT--VKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD----- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCE--EEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-----
Confidence 4689999999999999999999999997 7777787654332222111 112478899999999988776655
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc-
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS- 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~- 183 (231)
.+|+|||+|+... . ... +...+.+++|+.++..+++++.... +. .++|++||..+.
T Consensus 76 --~~d~Vih~A~~~~-------~-~~~----~~~~~~~~~nv~gt~~ll~a~~~~~---~~------~~~v~~SS~~~~~ 132 (322)
T PLN02662 76 --GCEGVFHTASPFY-------H-DVT----DPQAELIDPAVKGTLNVLRSCAKVP---SV------KRVVVTSSMAAVA 132 (322)
T ss_pred --CCCEEEEeCCccc-------C-CCC----ChHHHHHHHHHHHHHHHHHHHHhCC---CC------CEEEEccCHHHhc
Confidence 4799999998531 1 001 1123678999999999999876432 11 289999986532
Q ss_pred cCCCC-------------CC-----CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNR-------------LG-----GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~-------------~~-----~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
++..+ .| ....|+.+|.+.+.+++.+..+. |++++ .+.|+.+
T Consensus 133 y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~-~lRp~~v 192 (322)
T PLN02662 133 YNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMV-TINPAMV 192 (322)
T ss_pred CCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEE-EEeCCcc
Confidence 22100 01 01369999999999988776543 67744 6666654
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.3e-15 Score=127.54 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=111.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++|||||+|+||++++++|+++|++ .|+..++... ..+.+.... .+.++.++.+|++|.+++.+++++. +
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVS--DSERYVFEHADICDRAELDRIFAQH-----Q 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcc--cCCceEEEEecCCCHHHHHHHHHhc-----C
Confidence 5899999999999999999999986 4555554321 111121111 1346788999999999998888752 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD- 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~- 186 (231)
+|+|||+|+... . +.+....++.+++|+.++.++++++.++|..-+.+ .....++|++||... ++.
T Consensus 74 ~d~vih~A~~~~-------~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~-~~~~~~~i~~SS~~v-yg~~ 140 (352)
T PRK10084 74 PDAVMHLAAESH-------V----DRSITGPAAFIETNIVGTYVLLEAARNYWSALDED-KKNAFRFHHISTDEV-YGDL 140 (352)
T ss_pred CCEEEECCcccC-------C----cchhcCchhhhhhhhHHHHHHHHHHHHhccccccc-cccceeEEEecchhh-cCCC
Confidence 999999998642 1 11122346789999999999999998776321100 000127888888532 121
Q ss_pred ------------------CCCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 187 ------------------NRLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 187 ------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
.+..+...|+.+|.+.+.+++.++.+++
T Consensus 141 ~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g 186 (352)
T PRK10084 141 PHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG 186 (352)
T ss_pred CccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence 0112345899999999999999887653
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-15 Score=121.39 Aligned_cols=151 Identities=20% Similarity=0.173 Sum_probs=116.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++|||||.|-||.+.+..|++.|++ |++.|.-...-.+ +... ...++..|+.|.+.+.+++.+. +
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~--vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~-----~ 67 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHE--VVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEEN-----K 67 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCe--EEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhc-----C
Confidence 37999999999999999999999998 7777764433222 2211 1688999999999999999885 8
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
||.|||.||... ...+.+..-+.++.|+.++..+++++...-.+ .+|| ||.++.+|.+
T Consensus 68 idaViHFAa~~~-----------VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~----------~~vF-SStAavYG~p 125 (329)
T COG1087 68 IDAVVHFAASIS-----------VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK----------KFIF-SSTAAVYGEP 125 (329)
T ss_pred CCEEEECccccc-----------cchhhhCHHHHHhhchHhHHHHHHHHHHhCCC----------EEEE-ecchhhcCCC
Confidence 999999999643 23455666789999999999999988654432 5665 4556666532
Q ss_pred ---------CCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 188 ---------RLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 188 ---------~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
+...-.+|+.||.+.+.+.+.++....
T Consensus 126 ~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 126 TTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred CCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 233445899999999999999988875
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=123.08 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=110.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhh----cCCCceeEEEecCCChHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN----RFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~----~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
..+++|++|||||+|.||.+++++|+++|++ |++++|....... +..... ....++.++.+|+++.+++.+++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~ 88 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQT--VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC 88 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 4677899999999999999999999999996 8888875433222 111111 11246888999999988776665
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+ .+|+|||.|+... .. .+.++..+.+++|+.++.++++.+... +- .++|++|
T Consensus 89 ~-------~~d~ViHlAa~~~--------~~---~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~------~~~v~~S 140 (348)
T PRK15181 89 K-------NVDYVLHQAALGS--------VP---RSLKDPIATNSANIDGFLNMLTAARDA----HV------SSFTYAA 140 (348)
T ss_pred h-------CCCEEEECccccC--------ch---hhhhCHHHHHHHHHHHHHHHHHHHHHc----CC------CeEEEee
Confidence 4 4799999998642 11 112233457899999999999987542 21 1899998
Q ss_pred cCccccCCC---------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 179 ARVGSIGDN---------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 179 s~~~~~~~~---------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
|.. .++.. +......|+.+|.+.+.+++.++.+.
T Consensus 141 S~~-vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 183 (348)
T PRK15181 141 SSS-TYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY 183 (348)
T ss_pred chH-hhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh
Confidence 763 22210 11133579999999999998876543
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=121.80 Aligned_cols=155 Identities=17% Similarity=0.142 Sum_probs=108.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch-hhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|+||++++++|+++|++ |++.+|........ .......+.++.++.+|++|.+++.++++. .++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 74 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHD--VVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAI 74 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCe--EEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCC
Confidence 6999999999999999999999997 76666643332221 111111234678889999999988887764 379
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||+|+... ... ..+...+.+++|+.++..+++++.. .+.+ ++|++||.. .++..
T Consensus 75 d~vvh~a~~~~-------~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~Ss~~-~yg~~~ 132 (338)
T PRK10675 75 DTVIHFAGLKA-------VGE----SVQKPLEYYDNNVNGTLRLISAMRA----ANVK------NLIFSSSAT-VYGDQP 132 (338)
T ss_pred CEEEECCcccc-------ccc----hhhCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEeccHH-hhCCCC
Confidence 99999998652 111 1123456789999999999987643 2222 899988864 22210
Q ss_pred --------CC-CCccchhhhHHHHHHHHHHhhhhc
Q 026924 188 --------RL-GGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 188 --------~~-~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
+. .....|+.+|.+.+.+++.++.+.
T Consensus 133 ~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 167 (338)
T PRK10675 133 KIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ 167 (338)
T ss_pred CCccccccCCCCCCChhHHHHHHHHHHHHHHHHhc
Confidence 11 235689999999999999987654
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-14 Score=119.91 Aligned_cols=158 Identities=22% Similarity=0.236 Sum_probs=109.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|+++|++ |++.++............... .++..+.+|+++.+++.++++. +++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~--V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHE--VVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCe--EEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence 4799999999999999999999997 666665433222211111111 2577889999999999888774 4799
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC--
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-- 187 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-- 187 (231)
++||++|... .. .+.++..+.+++|+.++..+++++... +.+ ++|++||... ++..
T Consensus 73 ~vv~~ag~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~~v~~ss~~~-~g~~~~ 130 (328)
T TIGR01179 73 AVIHFAGLIA-------VG----ESVQDPLKYYRNNVVNTLNLLEAMQQT----GVK------KFIFSSSAAV-YGEPSS 130 (328)
T ss_pred EEEECccccC-------cc----hhhcCchhhhhhhHHHHHHHHHHHHhc----CCC------EEEEecchhh-cCCCCC
Confidence 9999999652 11 122334567889999999999876432 222 8888887542 2211
Q ss_pred -------CCCCccchhhhHHHHHHHHHHhhhhccccCCc
Q 026924 188 -------RLGGWHSYRASKAALNHDKICVSGVWSKEGSS 219 (231)
Q Consensus 188 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~ 219 (231)
+..+...|+.+|++.+.+++.++.+. .+++
T Consensus 131 ~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~ 167 (328)
T TIGR01179 131 IPISEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLS 167 (328)
T ss_pred CCccccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCC
Confidence 11234679999999999999987652 3455
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.7e-14 Score=120.32 Aligned_cols=158 Identities=16% Similarity=0.125 Sum_probs=112.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||+|+||+.+++.|+++|++ |++++|+.+....+. ...+.++.+|+++.+++.++++ .+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~l~~~~~-------~~ 65 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEE--VRVLVRPTSDRRNLE------GLDVEIVEGDLRDPASLRKAVA-------GC 65 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCE--EEEEEecCccccccc------cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence 36999999999999999999999996 888888765433221 2257889999999988776664 57
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-C
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-N 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-~ 187 (231)
|++||+++... . ..+++++.+++|+.++..+++++... +. .++|++||....... .
T Consensus 66 d~vi~~a~~~~-------~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~------~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 66 RALFHVAADYR-------L------WAPDPEEMYAANVEGTRNLLRAALEA----GV------ERVVYTSSVATLGVRGD 122 (328)
T ss_pred CEEEEeceecc-------c------CCCCHHHHHHHHHHHHHHHHHHHHHh----CC------CeEEEEechhhcCcCCC
Confidence 99999997431 1 11235677899999999999987643 22 289999986543210 0
Q ss_pred --------C---CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 188 --------R---LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 188 --------~---~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+ ......|+.+|.+.+.+++.++.+ .|++++ .+.|+.
T Consensus 123 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~-ilR~~~ 170 (328)
T TIGR03466 123 GTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVV-IVNPST 170 (328)
T ss_pred CCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEE-EEeCCc
Confidence 0 011347999999999999987665 366633 555543
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-14 Score=123.06 Aligned_cols=172 Identities=12% Similarity=0.072 Sum_probs=115.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-----CCCceeEEEecCCChHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-----FPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
..++|++|||||+|+||++++++|+++|++ |+++.|+.+..+.+.+.... ....+.++.+|++|.+++.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~--V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYS--VRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 567899999999999999999999999997 77667765443333221110 11357889999999998887776
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
. +|.+||.++... +.. .. ...+...++|+.++..+++++...- +. .++|++||
T Consensus 128 ~-------~d~V~hlA~~~~------~~~-~~----~~~~~~~~~nv~gt~~llea~~~~~---~v------~r~V~~SS 180 (367)
T PLN02686 128 G-------CAGVFHTSAFVD------PAG-LS----GYTKSMAELEAKASENVIEACVRTE---SV------RKCVFTSS 180 (367)
T ss_pred h-------ccEEEecCeeec------ccc-cc----cccchhhhhhHHHHHHHHHHHHhcC---Cc------cEEEEecc
Confidence 3 588999887642 111 00 0112346778999999999875321 11 18898888
Q ss_pred Ccc-ccCC----C---------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 180 RVG-SIGD----N---------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 180 ~~~-~~~~----~---------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
..+ .++. . +......|+.+|.+.+.+++.++.+ +|++++ ++.|+.+
T Consensus 181 ~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v-~lRp~~v 246 (367)
T PLN02686 181 LLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLA-TICPALV 246 (367)
T ss_pred HHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEE-EEcCCce
Confidence 531 1110 0 0012246999999999999887665 488844 8888765
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.7e-14 Score=114.93 Aligned_cols=158 Identities=14% Similarity=0.121 Sum_probs=119.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++.+|||||+|-||.+.+.+|.++|+. |+++|.- ...++.+....+.. +..+.++..|++|.+.+++++++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~--v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~--- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYG--VVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV--- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCc--EEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc---
Confidence 578999999999999999999999998 6666652 33334343332222 579999999999999999999987
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|.|+|-|+... . ..+.+...+.+..|+.+++.++.++..+-.. .+|+.||.. .+
T Consensus 77 --~fd~V~Hfa~~~~-------v----geS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~----------~~V~sssat-vY 132 (343)
T KOG1371|consen 77 --KFDAVMHFAALAA-------V----GESMENPLSYYHNNIAGTLNLLEVMKAHNVK----------ALVFSSSAT-VY 132 (343)
T ss_pred --CCceEEeehhhhc-------c----chhhhCchhheehhhhhHHHHHHHHHHcCCc----------eEEEeccee-ee
Confidence 6999999998653 1 1233334678999999999999998766532 778777653 44
Q ss_pred CCC---------CCC-CccchhhhHHHHHHHHHHhhhhcc
Q 026924 185 GDN---------RLG-GWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 185 ~~~---------~~~-~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
+.+ +.. +..+|+.+|.+++..++.....+.
T Consensus 133 G~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 133 GLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred cCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence 321 222 456899999999999999988875
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.5e-14 Score=116.43 Aligned_cols=165 Identities=18% Similarity=0.124 Sum_probs=113.4
Q ss_pred EEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccEE
Q 026924 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL 111 (231)
Q Consensus 32 LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~l 111 (231)
|||||+|.||++++++|+++|....|.+.++........ .... .....++.+|++|++++.++++ ..|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~-~~~~~~~~~Di~d~~~l~~a~~-------g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQK-SGVKEYIQGDITDPESLEEALE-------GVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhc-ccceeEEEeccccHHHHHHHhc-------CCceE
Confidence 799999999999999999999311377777765432211 1111 1233389999999999988776 46999
Q ss_pred EEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC---CC-
Q 026924 112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---DN- 187 (231)
Q Consensus 112 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~---~~- 187 (231)
||.|+... ... ....++.+++|+.|+-++++++... +. .++|++||...... ..
T Consensus 71 ~H~Aa~~~-------~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~V------krlVytSS~~vv~~~~~~~~ 128 (280)
T PF01073_consen 71 FHTAAPVP-------PWG-----DYPPEEYYKVNVDGTRNVLEAARKA----GV------KRLVYTSSISVVFDNYKGDP 128 (280)
T ss_pred EEeCcccc-------ccC-----cccHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEEcCcceeEeccCCCC
Confidence 99998642 111 2345678999999999999998753 22 28999999876543 10
Q ss_pred ----------CCCCccchhhhHHHHHHHHHHhhhhcccc--CCceeeeccCCCC
Q 026924 188 ----------RLGGWHSYRASKAALNHDKICVSGVWSKE--GSSYMYSVASRHC 229 (231)
Q Consensus 188 ----------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~--gi~~~~~v~pg~~ 229 (231)
+......|+.||+..+.++......-.+. .++.+ ++.|..|
T Consensus 129 ~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~-~lRP~~I 181 (280)
T PF01073_consen 129 IINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTC-ALRPAGI 181 (280)
T ss_pred cccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEE-EEeccEE
Confidence 11134479999999999998877622222 35534 6666543
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=112.74 Aligned_cols=167 Identities=18% Similarity=0.117 Sum_probs=105.9
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.+++++|||||+|+||++++++|++.|++ |++..|+....+... .. +.++.++.+|+++.. ..+.+.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~---~~-~~~~~~~~~Dl~d~~--~~l~~~~~--- 83 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFA--VKAGVRDVDKAKTSL---PQ-DPSLQIVRADVTEGS--DKLVEAIG--- 83 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCE--EEEEecCHHHHHHhc---cc-CCceEEEEeeCCCCH--HHHHHHhh---
Confidence 45789999999999999999999999997 877788765433211 11 346888999999842 12222221
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
.++|+||+++|... ...+ ...+++|..++..+++++. +.+.+ ++|++||......
T Consensus 84 ~~~d~vi~~~g~~~------~~~~---------~~~~~~n~~~~~~ll~a~~----~~~~~------~iV~iSS~~v~g~ 138 (251)
T PLN00141 84 DDSDAVICATGFRR------SFDP---------FAPWKVDNFGTVNLVEACR----KAGVT------RFILVSSILVNGA 138 (251)
T ss_pred cCCCEEEECCCCCc------CCCC---------CCceeeehHHHHHHHHHHH----HcCCC------EEEEEccccccCC
Confidence 36999999998541 1111 1224678888888888864 33332 8999998753211
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhh--ccccCCceeeeccCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGV--WSKEGSSYMYSVASRHC 229 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e--~~~~gi~~~~~v~pg~~ 229 (231)
..+.+....|...|.+...+..-+..| +...|++ ++.+.||.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~-~~iirpg~~ 183 (251)
T PLN00141 139 AMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGIN-YTIVRPGGL 183 (251)
T ss_pred CcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCc-EEEEECCCc
Confidence 111222345666665444333222222 4667999 449999986
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=119.44 Aligned_cols=166 Identities=20% Similarity=0.218 Sum_probs=109.3
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++.+++|||||+|.||++++++|+++ |++ |++++|+.+..+.+..... ....++.++.+|++|.+.+.++++
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~--V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---- 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHK--VLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK---- 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCE--EEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence 45678999999999999999999998 575 7777876544332221110 112468999999999988776654
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|+|||+|+... +. ... .+..+.+..|+.++..+++++... .+ ++|++||.. .
T Consensus 86 ---~~d~ViHlAa~~~------~~-~~~----~~~~~~~~~n~~gt~~ll~aa~~~---~~--------r~v~~SS~~-v 139 (386)
T PLN02427 86 ---MADLTINLAAICT------PA-DYN----TRPLDTIYSNFIDALPVVKYCSEN---NK--------RLIHFSTCE-V 139 (386)
T ss_pred ---cCCEEEEcccccC------hh-hhh----hChHHHHHHHHHHHHHHHHHHHhc---CC--------EEEEEeeee-e
Confidence 3699999998642 11 011 112234668999999999887532 11 899999863 2
Q ss_pred cCCC---------CC----------------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 184 IGDN---------RL----------------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 184 ~~~~---------~~----------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
++.. +. .....|+.+|.+.+.+++.++.. .|++++ .+-|+
T Consensus 140 Yg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~-ilR~~ 210 (386)
T PLN02427 140 YGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFT-IVRPF 210 (386)
T ss_pred eCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceE-Eeccc
Confidence 2210 00 01136999999999999876543 356643 44443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-13 Score=109.43 Aligned_cols=158 Identities=21% Similarity=0.166 Sum_probs=116.3
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
+|||||+|.||.+++++|+++|+. |+...|+.......... .++.++.+|+.+.+.++++++.. .+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~-----~~~~~~~~dl~~~~~~~~~~~~~-----~~d~ 68 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHE--VIVLSRSSNSESFEEKK-----LNVEFVIGDLTDKEQLEKLLEKA-----NIDV 68 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTE--EEEEESCSTGGHHHHHH-----TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCc--ccccccccccccccccc-----ceEEEEEeecccccccccccccc-----CceE
Confidence 699999999999999999999997 66666766543322211 17899999999999999999886 8999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-CC
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-RL 189 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-~~ 189 (231)
+||+|+... ...+.+...+.++.|+.++..+++.+...-. .+++++||.. .++.. +.
T Consensus 69 vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~----------~~~i~~sS~~-~y~~~~~~ 126 (236)
T PF01370_consen 69 VIHLAAFSS-----------NPESFEDPEEIIEANVQGTRNLLEAAREAGV----------KRFIFLSSAS-VYGDPDGE 126 (236)
T ss_dssp EEEEBSSSS-----------HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT----------SEEEEEEEGG-GGTSSSSS
T ss_pred EEEeecccc-----------ccccccccccccccccccccccccccccccc----------cccccccccc-cccccccc
Confidence 999998541 2223355667888999999999998864433 1899999853 33321 11
Q ss_pred --------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccC
Q 026924 190 --------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVAS 226 (231)
Q Consensus 190 --------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~p 226 (231)
.....|+.+|...+.+++.+..+. +++++ .+-|
T Consensus 127 ~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~-~~R~ 167 (236)
T PF01370_consen 127 PIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVT-ILRP 167 (236)
T ss_dssp SBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEE-EEEE
T ss_pred cccccccccccccccccccccccccccccccc---ccccc-cccc
Confidence 234569999999999999987765 55533 4433
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.6e-13 Score=122.14 Aligned_cols=162 Identities=11% Similarity=0.096 Sum_probs=108.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++|++|||||+|.||++++++|+++|....|+..++.... ........ ....++.++.+|++|.+.+.+++..
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhhhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence 356789999999999999999999998422247777774311 11111111 1134788999999998877665432
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
..+|+|||+|+... .. .+..+..+.+++|+.++..+++++...- .. .++|++||...
T Consensus 79 --~~~D~ViHlAa~~~------~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~v------kr~I~~SS~~v- 135 (668)
T PLN02260 79 --EGIDTIMHFAAQTH------VD-----NSFGNSFEFTKNNIYGTHVLLEACKVTG---QI------RRFIHVSTDEV- 135 (668)
T ss_pred --cCCCEEEECCCccC------ch-----hhhhCHHHHHHHHHHHHHHHHHHHHhcC---CC------cEEEEEcchHH-
Confidence 37999999999642 11 1112234578899999999999875321 11 28999998642
Q ss_pred cCCC------------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 184 IGDN------------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 184 ~~~~------------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
++.. +......|+.+|.+.+.+++.+..++
T Consensus 136 yg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~ 177 (668)
T PLN02260 136 YGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177 (668)
T ss_pred hCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc
Confidence 2210 11133579999999999999876654
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-13 Score=115.50 Aligned_cols=159 Identities=15% Similarity=0.116 Sum_probs=110.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++++|||||+|.||++++++|+++|++ |++++|+....+. ..........++.++.+|++|.+++.++++...
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~- 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN--VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG- 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC-
Confidence 45789999999999999999999999997 8888887654332 111111123468899999999999988887541
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||++... .. ..+.+++|+.++.++++++. +.+.+ ++|++||....
T Consensus 135 --~~~D~Vi~~aa~~~--------~~--------~~~~~~vn~~~~~~ll~aa~----~~gv~------r~V~iSS~~v~ 186 (390)
T PLN02657 135 --DPVDVVVSCLASRT--------GG--------VKDSWKIDYQATKNSLDAGR----EVGAK------HFVLLSAICVQ 186 (390)
T ss_pred --CCCcEEEECCccCC--------CC--------CccchhhHHHHHHHHHHHHH----HcCCC------EEEEEeecccc
Confidence 27999999998421 10 11235678888888888764 23322 89999987532
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
.....|..+|...+...+. ...+++++ .+-|+
T Consensus 187 ------~p~~~~~~sK~~~E~~l~~-----~~~gl~~t-IlRp~ 218 (390)
T PLN02657 187 ------KPLLEFQRAKLKFEAELQA-----LDSDFTYS-IVRPT 218 (390)
T ss_pred ------CcchHHHHHHHHHHHHHHh-----ccCCCCEE-EEccH
Confidence 2234688899998887754 23567644 55553
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.3e-13 Score=112.99 Aligned_cols=168 Identities=16% Similarity=0.138 Sum_probs=109.6
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc---chhhhhhcC-------C-CceeEEEecCCChHH--HHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNRF-------P-ERLDVLQLDLTVEST--IEA 96 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~---~~~~~~~~~-------~-~~v~~~~~Dls~~~~--v~~ 96 (231)
++|||||+|+||++++++|+++|....|++..|+..... .+.+..... . .++.++.+|++++.- -..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 489999999999999999999983214888888765322 122211111 1 478999999986531 011
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
...++ ...+|++|||++... . ...+++.+++|+.++..+++.+... +. .++++
T Consensus 81 ~~~~~---~~~~d~vih~a~~~~-------~-------~~~~~~~~~~nv~g~~~ll~~a~~~----~~------~~~v~ 133 (367)
T TIGR01746 81 EWERL---AENVDTIVHNGALVN-------W-------VYPYSELRAANVLGTREVLRLAASG----RA------KPLHY 133 (367)
T ss_pred HHHHH---HhhCCEEEeCCcEec-------c-------CCcHHHHhhhhhHHHHHHHHHHhhC----CC------ceEEE
Confidence 11222 246899999998642 0 0124566789999999999887542 21 16899
Q ss_pred eccCccccCCC-------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 177 LSARVGSIGDN-------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 177 iss~~~~~~~~-------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+||........ .......|+.+|.+.+.+++.+.. .|++ .+.+.||.+
T Consensus 134 iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~-~~i~Rpg~v 194 (367)
T TIGR01746 134 VSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLP-VTIVRPGRI 194 (367)
T ss_pred EccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCC-EEEECCCce
Confidence 99876442210 011134699999999999876543 3888 448888865
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=109.43 Aligned_cols=157 Identities=20% Similarity=0.191 Sum_probs=108.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
+|||||+|.||.+++++|++.|++ |+..+|......... ..+.++.+|+++.+.+.++.+.. + |+
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~ 67 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHD--VRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV-----P-DA 67 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCe--EEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence 999999999999999999999997 889898776544322 46788899999985444444332 2 99
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-C--
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-N-- 187 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-~-- 187 (231)
+||+++... ......+ ...+.+++|+.++..+++++.. .+. .++|+.||.....+. .
T Consensus 68 vih~aa~~~--------~~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~------~~~v~~ss~~~~~~~~~~~ 127 (314)
T COG0451 68 VIHLAAQSS--------VPDSNAS--DPAEFLDVNVDGTLNLLEAARA----AGV------KRFVFASSVSVVYGDPPPL 127 (314)
T ss_pred EEEccccCc--------hhhhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCC------CeEEEeCCCceECCCCCCC
Confidence 999999653 1111111 3456899999999999999876 121 178886654433221 0
Q ss_pred ---C--CCCcc--chhhhHHHHHHHHHHhhhhccccCCceeeeccC
Q 026924 188 ---R--LGGWH--SYRASKAALNHDKICVSGVWSKEGSSYMYSVAS 226 (231)
Q Consensus 188 ---~--~~~~~--~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~p 226 (231)
. .+..+ .|+.+|.+.+.+++.... ..|+.++ .+-|
T Consensus 128 ~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~-ilR~ 169 (314)
T COG0451 128 PIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVV-ILRP 169 (314)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeE-EEee
Confidence 0 01112 599999999999999888 4566644 4444
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=107.39 Aligned_cols=184 Identities=15% Similarity=0.118 Sum_probs=141.0
Q ss_pred CeEEEEecC-CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGa-s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
..+|||.|. ..-|++.+|..|-++|+ .|+++..+.+..+.+.++. ..++.....|..+..++...+.+..+.+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGF--IV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~ 77 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGF--IVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLS 77 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCe--EEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence 358999996 78999999999999999 4777777665544443332 34588888888887777777777765443
Q ss_pred --------------CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCce
Q 026924 107 --------------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA 172 (231)
Q Consensus 107 --------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~ 172 (231)
.+..||..+... .+.++++..+.++|.+.+++|+..++..++.++|+++.+.+. ..
T Consensus 78 ~p~~p~~~~~~h~l~L~svi~~Psl~------yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~----~~ 147 (299)
T PF08643_consen 78 RPHVPFPGAPPHHLQLKSVIFIPSLS------YPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQ----KS 147 (299)
T ss_pred CCCCCCCCCCCceeEEEEEEEecCCC------CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----Cc
Confidence 345555555443 378999999999999999999999999999999999882200 02
Q ss_pred EEEEec-cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 173 VVANLS-ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 173 ~iv~is-s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
++|.+. |+.+... .|.+++-.....++.+++++|++|+.+.+|.|+ .+.-|.+|
T Consensus 148 ~iil~~Psi~ssl~---~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~-~i~LG~l~ 202 (299)
T PF08643_consen 148 KIILFNPSISSSLN---PPFHSPESIVSSALSSFFTSLRRELRPHNIDVT-QIKLGNLD 202 (299)
T ss_pred eEEEEeCchhhccC---CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceE-EEEeeeec
Confidence 566655 5555556 678888999999999999999999999999966 77766654
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=109.22 Aligned_cols=136 Identities=18% Similarity=0.154 Sum_probs=97.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||++++++|++.| + |+..+|... .+..|++|.+.+.++++.. ++|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~--V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D 56 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-N--LIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPD 56 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-C--EEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence 69999999999999999999999 6 666676431 1347999999998887763 689
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC----
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---- 185 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~---- 185 (231)
+|||+|+... .. ...++.+..+++|+.++..+++++... + .++|++||..-.-+
T Consensus 57 ~Vih~Aa~~~------~~-----~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-------~~~v~~Ss~~Vy~~~~~~ 114 (299)
T PRK09987 57 VIVNAAAHTA------VD-----KAESEPEFAQLLNATSVEAIAKAANEV----G-------AWVVHYSTDYVFPGTGDI 114 (299)
T ss_pred EEEECCccCC------cc-----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEccceEECCCCCC
Confidence 9999998652 11 111223456789999999999987542 1 17888887532111
Q ss_pred ----CCCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 186 ----DNRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 186 ----~~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
..+..+...|+.+|.+.+.+++.+..+
T Consensus 115 p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~ 145 (299)
T PRK09987 115 PWQETDATAPLNVYGETKLAGEKALQEHCAK 145 (299)
T ss_pred CcCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 111123357999999999999876543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.1e-12 Score=108.30 Aligned_cols=145 Identities=16% Similarity=0.098 Sum_probs=95.7
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH--HcCCc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KYGSL 108 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~--~~g~i 108 (231)
+|||||+|.||++++++|+++|++ ++++.++....... .....+|+.|..+.+++++++.+ .++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~--~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCc--eEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 799999999999999999999996 44433433221110 01234577776666666655532 34679
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||+|+... .. ... -+..++.|+.++..+++++... + .++|++||... ++..
T Consensus 70 d~Vih~A~~~~-------~~---~~~---~~~~~~~n~~~t~~ll~~~~~~----~-------~~~i~~SS~~v-yg~~~ 124 (308)
T PRK11150 70 EAIFHEGACSS-------TT---EWD---GKYMMDNNYQYSKELLHYCLER----E-------IPFLYASSAAT-YGGRT 124 (308)
T ss_pred cEEEECceecC-------Cc---CCC---hHHHHHHHHHHHHHHHHHHHHc----C-------CcEEEEcchHH-hCcCC
Confidence 99999998542 11 111 1346899999999999987532 2 27888888642 2211
Q ss_pred --------CCCCccchhhhHHHHHHHHHHhhhh
Q 026924 188 --------RLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 188 --------~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
+..+...|+.+|.+.+.+++.++.+
T Consensus 125 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 157 (308)
T PRK11150 125 DDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE 157 (308)
T ss_pred CCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1123357999999999999887654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.3e-12 Score=108.98 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=100.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC-ChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~v~~~~~~~~~~~g 106 (231)
+++|||||+|.||++++++|++. |++ |+..+|+..... .... ...+.++.+|++ +.+.+.++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~--V~~~~r~~~~~~---~~~~--~~~~~~~~~Dl~~~~~~~~~~~~------- 67 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWE--VYGMDMQTDRLG---DLVN--HPRMHFFEGDITINKEWIEYHVK------- 67 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCe--EEEEeCcHHHHH---Hhcc--CCCeEEEeCCCCCCHHHHHHHHc-------
Confidence 46999999999999999999986 675 888887653221 1111 236888999998 5555544332
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
.+|+|||+|+... +. ...++.+..+++|+.++..+++++... + .++|++||.. .++.
T Consensus 68 ~~d~ViH~aa~~~------~~-----~~~~~p~~~~~~n~~~~~~ll~aa~~~----~-------~~~v~~SS~~-vyg~ 124 (347)
T PRK11908 68 KCDVILPLVAIAT------PA-----TYVKQPLRVFELDFEANLPIVRSAVKY----G-------KHLVFPSTSE-VYGM 124 (347)
T ss_pred CCCEEEECcccCC------hH-----HhhcCcHHHHHHHHHHHHHHHHHHHhc----C-------CeEEEEecce-eecc
Confidence 5899999998642 11 112233467899999999999887542 1 1899999863 2221
Q ss_pred C----------CC------CCccchhhhHHHHHHHHHHhhhh
Q 026924 187 N----------RL------GGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 187 ~----------~~------~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
. +. .....|+.+|.+.+.+++.++..
T Consensus 125 ~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 166 (347)
T PRK11908 125 CPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME 166 (347)
T ss_pred CCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 0 00 11226999999999999987654
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.1e-12 Score=108.31 Aligned_cols=150 Identities=13% Similarity=0.003 Sum_probs=102.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||+|.||++++++|.++|++ |+.++|..... ... ......++.+|+++.+.+.++++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~--V~~v~r~~~~~--~~~----~~~~~~~~~~Dl~d~~~~~~~~~------- 84 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHY--IIASDWKKNEH--MSE----DMFCHEFHLVDLRVMENCLKVTK------- 84 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCE--EEEEEeccccc--ccc----ccccceEEECCCCCHHHHHHHHh-------
Confidence 6789999999999999999999999997 88888754211 100 01124678899999877655542
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
.+|+|||+|+... ... ... ......++.|+.++.++++++... +. .++|++||... ++.
T Consensus 85 ~~D~Vih~Aa~~~------~~~-~~~---~~~~~~~~~N~~~t~nll~aa~~~----~v------k~~V~~SS~~v-Yg~ 143 (370)
T PLN02695 85 GVDHVFNLAADMG------GMG-FIQ---SNHSVIMYNNTMISFNMLEAARIN----GV------KRFFYASSACI-YPE 143 (370)
T ss_pred CCCEEEEcccccC------Ccc-ccc---cCchhhHHHHHHHHHHHHHHHHHh----CC------CEEEEeCchhh-cCC
Confidence 4799999998542 011 111 112345678999999999987532 21 18999988631 110
Q ss_pred ---------------CCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 187 ---------------NRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 187 ---------------~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
.+......|+.+|.+.+.+++.++..
T Consensus 144 ~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~ 184 (370)
T PLN02695 144 FKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD 184 (370)
T ss_pred ccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 02234458999999999999887654
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.4e-12 Score=117.53 Aligned_cols=152 Identities=15% Similarity=0.130 Sum_probs=104.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHH-HHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~ 102 (231)
.++++++|||||+|.||++++++|+++ |++ |+..+|........ .. ..++.++.+|++|..+ +++++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~--V~~l~r~~~~~~~~---~~--~~~~~~~~gDl~d~~~~l~~~l---- 380 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYE--VYGLDIGSDAISRF---LG--HPRFHFVEGDISIHSEWIEYHI---- 380 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcE--EEEEeCCchhhhhh---cC--CCceEEEeccccCcHHHHHHHh----
Confidence 346889999999999999999999986 686 88888865432211 11 2368888999998654 33222
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
..+|+|||+|+... +.. ..+..++.+++|+.++..+++++... .+ ++|++||..
T Consensus 381 ---~~~D~ViHlAa~~~------~~~-----~~~~~~~~~~~Nv~~t~~ll~a~~~~---~~--------~~V~~SS~~- 434 (660)
T PRK08125 381 ---KKCDVVLPLVAIAT------PIE-----YTRNPLRVFELDFEENLKIIRYCVKY---NK--------RIIFPSTSE- 434 (660)
T ss_pred ---cCCCEEEECccccC------chh-----hccCHHHHHHhhHHHHHHHHHHHHhc---CC--------eEEEEcchh-
Confidence 25899999998653 111 11223457889999999999998643 11 889999853
Q ss_pred ccCCC---------C----CC---CccchhhhHHHHHHHHHHhhhhc
Q 026924 183 SIGDN---------R----LG---GWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 183 ~~~~~---------~----~~---~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.++.. + .+ ....|+.+|.+.+.+++.++.++
T Consensus 435 vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~ 481 (660)
T PRK08125 435 VYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE 481 (660)
T ss_pred hcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc
Confidence 22210 0 01 12369999999999999876654
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=5e-12 Score=104.83 Aligned_cols=130 Identities=25% Similarity=0.276 Sum_probs=95.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||.+++++|++.|++ |++.+|+ .+|+.+.++++++++.. .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~--v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d 52 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRV--VVALTSS---------------------QLDLTDPEALERLLRAI-----RPD 52 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCE--EEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence 3799999999999999999999997 7777774 37999999988887653 689
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC----
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---- 185 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~---- 185 (231)
++||+++... . +......+..+++|+.++..+++++... + .++|++||.....+
T Consensus 53 ~vi~~a~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~v~~Ss~~vy~~~~~~ 110 (287)
T TIGR01214 53 AVVNTAAYTD-------V----DGAESDPEKAFAVNALAPQNLARAAARH----G-------ARLVHISTDYVFDGEGKR 110 (287)
T ss_pred EEEECCcccc-------c----cccccCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEeeeeeecCCCCC
Confidence 9999998542 1 1112234567899999999999987432 2 17888888532111
Q ss_pred ----CCCCCCccchhhhHHHHHHHHHHh
Q 026924 186 ----DNRLGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 186 ----~~~~~~~~~y~~sK~a~~~~~~~l 209 (231)
..+......|+.+|.+.+.+++.+
T Consensus 111 ~~~E~~~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 111 PYREDDATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 001113457999999999999876
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.3e-12 Score=106.03 Aligned_cols=144 Identities=15% Similarity=-0.003 Sum_probs=97.8
Q ss_pred EEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccEE
Q 026924 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL 111 (231)
Q Consensus 32 LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~l 111 (231)
|||||+|.||.++++.|++.|++ |++..+. ..+|+++.+++.++++.. ++|+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~--v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~V 53 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFT--NLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYV 53 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCc--EEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence 69999999999999999999997 4444321 137999999888877763 67999
Q ss_pred EEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC----
Q 026924 112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN---- 187 (231)
Q Consensus 112 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~---- 187 (231)
||+|+... ... ...++..+.++.|+.++..+++++... +. .++|++||.. .++..
T Consensus 54 ih~A~~~~--------~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~------~~~i~~SS~~-vyg~~~~~~ 112 (306)
T PLN02725 54 ILAAAKVG--------GIH--ANMTYPADFIRENLQIQTNVIDAAYRH----GV------KKLLFLGSSC-IYPKFAPQP 112 (306)
T ss_pred EEeeeeec--------ccc--hhhhCcHHHHHHHhHHHHHHHHHHHHc----CC------CeEEEeCcee-ecCCCCCCC
Confidence 99998631 000 111223456889999999999988643 11 1889888853 22210
Q ss_pred ---------C-CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 188 ---------R-LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 188 ---------~-~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
+ .|....|+.+|.+.+.+++.+..+. +++++ .+-|+
T Consensus 113 ~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~-~~R~~ 158 (306)
T PLN02725 113 IPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAI-SGMPT 158 (306)
T ss_pred CCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEE-EEEec
Confidence 0 1112249999999999988876554 55533 44443
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=103.63 Aligned_cols=143 Identities=16% Similarity=0.138 Sum_probs=97.5
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
+|||||+|.||.+++++|.++|++ .|++++|.... ..+.+. . ...+..|+.+++.++.+.+. .+.++|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~-~~~~~~----~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~ 69 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDG-HKFLNL----A--DLVIADYIDKEDFLDRLEKG---AFGKIEA 69 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCc-hhhhhh----h--heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence 589999999999999999999984 37777665432 111111 1 12456788877666555443 3468999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC---
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--- 187 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~--- 187 (231)
|||+|+... .+.++++..+++|+.++..+++++... + .++|++||.. .++..
T Consensus 70 vvh~A~~~~-------------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-------~~~v~~SS~~-vy~~~~~~ 124 (314)
T TIGR02197 70 IFHQGACSD-------------TTETDGEYMMENNYQYSKRLLDWCAEK----G-------IPFIYASSAA-TYGDGEAG 124 (314)
T ss_pred EEECccccC-------------ccccchHHHHHHHHHHHHHHHHHHHHh----C-------CcEEEEccHH-hcCCCCCC
Confidence 999998531 112345667899999999999987542 1 2788899854 33210
Q ss_pred ------CCCCccchhhhHHHHHHHHHHh
Q 026924 188 ------RLGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 188 ------~~~~~~~y~~sK~a~~~~~~~l 209 (231)
+..+...|+.+|.+.+.+++..
T Consensus 125 ~~e~~~~~~p~~~Y~~sK~~~e~~~~~~ 152 (314)
T TIGR02197 125 FREGRELERPLNVYGYSKFLFDQYVRRR 152 (314)
T ss_pred cccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence 0113557999999999999864
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=108.32 Aligned_cols=149 Identities=18% Similarity=0.178 Sum_probs=101.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+.+++++|||||+|.||++++++|+++|++ |+++++....... ..... ...++.++..|+.++. +
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~--V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l----- 181 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDS--VIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L----- 181 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcCE--EEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-----
Confidence 446789999999999999999999999997 7777764322111 11111 1246778888986652 1
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
..+|+|||+|+... +. .. ..+..+.+++|+.++..+++++... + .++|++||....
T Consensus 182 --~~~D~ViHlAa~~~------~~--~~---~~~p~~~~~~Nv~gt~nLleaa~~~----g-------~r~V~~SS~~VY 237 (442)
T PLN02206 182 --LEVDQIYHLACPAS------PV--HY---KFNPVKTIKTNVVGTLNMLGLAKRV----G-------ARFLLTSTSEVY 237 (442)
T ss_pred --cCCCEEEEeeeecc------hh--hh---hcCHHHHHHHHHHHHHHHHHHHHHh----C-------CEEEEECChHHh
Confidence 25899999998542 11 11 1123567899999999999988532 2 178888886422
Q ss_pred cCC--------------CCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 184 IGD--------------NRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 184 ~~~--------------~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
+. .+......|+.+|.+.+.+++.+.+.
T Consensus 238 -g~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~ 279 (442)
T PLN02206 238 -GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 279 (442)
T ss_pred -CCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 21 01122457999999999999887554
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.6e-11 Score=105.53 Aligned_cols=147 Identities=18% Similarity=0.207 Sum_probs=100.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+.+++|||||+|.||++++++|+++|++ |++++|....... ...... ..++.++..|+.+.. .
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~--V~~ldr~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~------------~ 182 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE--VIVIDNFFTGRKENLVHLFG--NPRFELIRHDVVEPI------------L 182 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCCCccHhHhhhhcc--CCceEEEECcccccc------------c
Confidence 4578999999999999999999999997 8888875432211 111111 236778888886542 1
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
..+|+|||+|+... +. . .. .+..+.+++|+.++..+++++... + .++|++||.. .++
T Consensus 183 ~~~D~ViHlAa~~~------~~-~-~~---~~p~~~~~~Nv~gT~nLleaa~~~----g-------~r~V~~SS~~-VYg 239 (436)
T PLN02166 183 LEVDQIYHLACPAS------PV-H-YK---YNPVKTIKTNVMGTLNMLGLAKRV----G-------ARFLLTSTSE-VYG 239 (436)
T ss_pred cCCCEEEECceecc------ch-h-hc---cCHHHHHHHHHHHHHHHHHHHHHh----C-------CEEEEECcHH-HhC
Confidence 25899999998542 11 1 11 123567899999999999988643 1 1788888764 222
Q ss_pred C--------------CCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 186 D--------------NRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 186 ~--------------~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
. .+......|+.+|.+.+.+++.+.+.
T Consensus 240 ~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~ 280 (436)
T PLN02166 240 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG 280 (436)
T ss_pred CCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 1 01222346999999999999887654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.8e-11 Score=100.65 Aligned_cols=131 Identities=23% Similarity=0.220 Sum_probs=94.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++||||++|-||.++.+.|.+.|+. ++.++|+ .+|++|.+++.+++++. ++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~--v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~p 52 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYE--VIATSRS---------------------DLDLTDPEAVAKLLEAF-----KP 52 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEE--EEEESTT---------------------CS-TTSHHHHHHHHHHH-------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCE--EEEeCch---------------------hcCCCCHHHHHHHHHHh-----CC
Confidence 37999999999999999999999986 7777775 48999999999999887 69
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||+|+... .+...++.+..+.+|+.++..+++.+... + .++|++||..-+.|..
T Consensus 53 d~Vin~aa~~~-----------~~~ce~~p~~a~~iN~~~~~~la~~~~~~----~-------~~li~~STd~VFdG~~~ 110 (286)
T PF04321_consen 53 DVVINCAAYTN-----------VDACEKNPEEAYAINVDATKNLAEACKER----G-------ARLIHISTDYVFDGDKG 110 (286)
T ss_dssp SEEEE-----------------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC----T--------EEEEEEEGGGS-SSTS
T ss_pred CeEeccceeec-----------HHhhhhChhhhHHHhhHHHHHHHHHHHHc----C-------CcEEEeeccEEEcCCcc
Confidence 99999998642 23344456678999999999999988532 2 2999999975333321
Q ss_pred -------CCCCccchhhhHHHHHHHHHHh
Q 026924 188 -------RLGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 188 -------~~~~~~~y~~sK~a~~~~~~~l 209 (231)
+..+...|+.+|...+..++..
T Consensus 111 ~~y~E~d~~~P~~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 111 GPYTEDDPPNPLNVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp SSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 1123458999999999998873
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.5e-11 Score=100.78 Aligned_cols=133 Identities=20% Similarity=0.153 Sum_probs=94.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||++++++|+++|++ |.+..|+......+. ..++.++.+|++|++++.++++ .+|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~--V~~l~R~~~~~~~l~------~~~v~~v~~Dl~d~~~l~~al~-------g~d 66 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQ--VRCLVRNLRKASFLK------EWGAELVYGDLSLPETLPPSFK-------GVT 66 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCe--EEEEEcChHHhhhHh------hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence 6999999999999999999999997 888888754322111 1357889999999988765554 579
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
+|||+++... . +.....++|+.++.++++++... +-. ++|++||..+..
T Consensus 67 ~Vi~~~~~~~-------~---------~~~~~~~~~~~~~~~l~~aa~~~----gvk------r~I~~Ss~~~~~----- 115 (317)
T CHL00194 67 AIIDASTSRP-------S---------DLYNAKQIDWDGKLALIEAAKAA----KIK------RFIFFSILNAEQ----- 115 (317)
T ss_pred EEEECCCCCC-------C---------CccchhhhhHHHHHHHHHHHHHc----CCC------EEEEeccccccc-----
Confidence 9999876321 1 12235667888888888877532 221 899998853321
Q ss_pred CCccchhhhHHHHHHHHHH
Q 026924 190 GGWHSYRASKAALNHDKIC 208 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~ 208 (231)
.+...|..+|...+.+.+.
T Consensus 116 ~~~~~~~~~K~~~e~~l~~ 134 (317)
T CHL00194 116 YPYIPLMKLKSDIEQKLKK 134 (317)
T ss_pred cCCChHHHHHHHHHHHHHH
Confidence 1224688899988877653
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-10 Score=103.79 Aligned_cols=127 Identities=13% Similarity=0.227 Sum_probs=85.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCcc-EEEEeecCCCCccch---h-hh-----h----hcC--------CCcee
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGL---L-DL-----K----NRF--------PERLD 82 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~-~vi~~~r~~~~~~~~---~-~~-----~----~~~--------~~~v~ 82 (231)
-++||++|||||+|.||..++++|++.+.++ +|++..|........ . +. . +.. ..++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 4689999999999999999999999864321 578888865432221 1 10 0 111 15789
Q ss_pred EEEecCCCh-------HHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHH
Q 026924 83 VLQLDLTVE-------STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH 155 (231)
Q Consensus 83 ~~~~Dls~~-------~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 155 (231)
++..|++++ +.++.+++ .+|+|||+|+... +. +..+..+++|+.++..+++.
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~----------~~----~~~~~~~~~Nv~gt~~ll~~ 146 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN----------FD----ERYDVALGINTLGALNVLNF 146 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC----------Cc----CCHHHHHHHHHHHHHHHHHH
Confidence 999999843 32333332 5899999998542 11 24567889999999999998
Q ss_pred hhhhhhcCCCCcccCceEEEEeccCc
Q 026924 156 MSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+...- +. .++|++||..
T Consensus 147 a~~~~---~~------k~~V~vST~~ 163 (491)
T PLN02996 147 AKKCV---KV------KMLLHVSTAY 163 (491)
T ss_pred HHhcC---CC------CeEEEEeeeE
Confidence 75421 11 1788888765
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.5e-11 Score=95.80 Aligned_cols=165 Identities=15% Similarity=0.150 Sum_probs=93.6
Q ss_pred EecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc---hhhhhh----------cCCCceeEEEecCCChHH--HHHH
Q 026924 33 VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKN----------RFPERLDVLQLDLTVEST--IEAS 97 (231)
Q Consensus 33 VtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~---~~~~~~----------~~~~~v~~~~~Dls~~~~--v~~~ 97 (231)
||||+|.||..+..+|++.+..+.|++..|.....+. +.+.+. ....++.++..|++++.- -.+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 7999999999999999998862258888887644222 222211 125799999999998641 1122
Q ss_pred HHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
++++. ..+|+|||||+... . . ..+++..++|+.|+..+++.+.. .+. .+++++
T Consensus 81 ~~~L~---~~v~~IiH~Aa~v~---------~-~----~~~~~~~~~NV~gt~~ll~la~~----~~~------~~~~~i 133 (249)
T PF07993_consen 81 YQELA---EEVDVIIHCAASVN---------F-N----APYSELRAVNVDGTRNLLRLAAQ----GKR------KRFHYI 133 (249)
T ss_dssp HHHHH---HH--EEEE--SS-S---------B-S-----S--EEHHHHHHHHHHHHHHHTS----SS---------EEEE
T ss_pred hhccc---cccceeeecchhhh---------h-c----ccchhhhhhHHHHHHHHHHHHHh----ccC------cceEEe
Confidence 33332 25799999998542 1 1 13445788999999999998752 221 289999
Q ss_pred ccCccccCCCC------------------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 178 SARVGSIGDNR------------------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 178 ss~~~~~~~~~------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
||. ...+... ......|..||+.-|.+++..+.+ .|+++. .+-||.|
T Consensus 134 STa-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~-I~Rp~~i 198 (249)
T PF07993_consen 134 STA-YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVT-IYRPGII 198 (249)
T ss_dssp EEG-GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EE-EEEE-EE
T ss_pred ccc-cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEE-EEecCcc
Confidence 983 2221111 122347999999999999887765 356633 5556543
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=96.96 Aligned_cols=135 Identities=15% Similarity=0.035 Sum_probs=87.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.+++|||||+|.||++++++|+++|++ |.... .|+.+.+.+...++.. +
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~--V~~~~------------------------~~~~~~~~v~~~l~~~-----~ 57 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGID--FHYGS------------------------GRLENRASLEADIDAV-----K 57 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCE--EEEec------------------------CccCCHHHHHHHHHhc-----C
Confidence 367999999999999999999999997 54321 2344555555444432 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc--ccc-
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSI- 184 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~--~~~- 184 (231)
+|+|||+|+... . ...+...++..+.+++|+.++.++++++...-. .+++ +||.. +..
T Consensus 58 ~D~ViH~Aa~~~-------~-~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv----------~~v~-~sS~~vy~~~~ 118 (298)
T PLN02778 58 PTHVFNAAGVTG-------R-PNVDWCESHKVETIRANVVGTLTLADVCRERGL----------VLTN-YATGCIFEYDD 118 (298)
T ss_pred CCEEEECCcccC-------C-CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----------CEEE-EecceEeCCCC
Confidence 899999999653 1 111122234457899999999999999864311 1444 44322 110
Q ss_pred ----------C-C-CCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 185 ----------G-D-NRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 185 ----------~-~-~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
. . .+.+....|+.+|.+.+.+++.++..
T Consensus 119 ~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~ 158 (298)
T PLN02778 119 AHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV 158 (298)
T ss_pred CCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc
Confidence 0 0 11122357999999999999887543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.9e-11 Score=108.17 Aligned_cols=161 Identities=20% Similarity=0.177 Sum_probs=104.8
Q ss_pred EEEEecCCCchhHHHHHHHH--hcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHH--HHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLL--EKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVEST--IEASAKSIKEK 104 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~--~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~--v~~~~~~~~~~ 104 (231)
++|||||+|.||++++++|+ +.|++ |++++|+... ..+.......+ .++.++.+|+++++. .....+++
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~--V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l--- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREAT--VHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL--- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCE--EEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---
Confidence 69999999999999999999 57886 8888886432 22222222222 578899999998531 01112222
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
..+|+|||+|+... .. ....+..++|+.++..+++++... +. .++|++||....
T Consensus 76 -~~~D~Vih~Aa~~~-------~~-------~~~~~~~~~nv~gt~~ll~~a~~~----~~------~~~v~~SS~~v~- 129 (657)
T PRK07201 76 -GDIDHVVHLAAIYD-------LT-------ADEEAQRAANVDGTRNVVELAERL----QA------ATFHHVSSIAVA- 129 (657)
T ss_pred -cCCCEEEECceeec-------CC-------CCHHHHHHHHhHHHHHHHHHHHhc----CC------CeEEEEeccccc-
Confidence 47899999999642 11 112456788999999998887532 11 289999886532
Q ss_pred CCC-----------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GDN-----------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~~-----------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+.. +.+....|+.+|...+.+++. ..|++++ .+-|+.|
T Consensus 130 g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~-ilRp~~v 178 (657)
T PRK07201 130 GDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWR-VYRPAVV 178 (657)
T ss_pred cCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEE-EEcCCee
Confidence 110 011234699999999998864 2366644 5556543
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=95.36 Aligned_cols=129 Identities=25% Similarity=0.274 Sum_probs=101.9
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
+||||++|-+|.++++.|. .+++ |+.++|.+ +|++|.+.+.+++++. ++|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~--v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDv 53 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFE--VIATDRAE---------------------LDITDPDAVLEVIRET-----RPDV 53 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCce--EEeccCcc---------------------ccccChHHHHHHHHhh-----CCCE
Confidence 8999999999999999999 5675 77776644 8999999999999997 8999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC--
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-- 188 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~-- 188 (231)
|||+|++.. .+....+.+..+.+|..++.++++++... + ..+|.+|+-.-+.|..+
T Consensus 54 VIn~AAyt~-----------vD~aE~~~e~A~~vNa~~~~~lA~aa~~~----g-------a~lVhiSTDyVFDG~~~~~ 111 (281)
T COG1091 54 VINAAAYTA-----------VDKAESEPELAFAVNATGAENLARAAAEV----G-------ARLVHISTDYVFDGEKGGP 111 (281)
T ss_pred EEECccccc-----------cccccCCHHHHHHhHHHHHHHHHHHHHHh----C-------CeEEEeecceEecCCCCCC
Confidence 999999753 22233345678999999999999998532 2 38999998765554321
Q ss_pred ------CCCccchhhhHHHHHHHHHHhh
Q 026924 189 ------LGGWHSYRASKAALNHDKICVS 210 (231)
Q Consensus 189 ------~~~~~~y~~sK~a~~~~~~~l~ 210 (231)
..+...|+.||.+.+..++...
T Consensus 112 Y~E~D~~~P~nvYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 112 YKETDTPNPLNVYGRSKLAGEEAVRAAG 139 (281)
T ss_pred CCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence 2234579999999999998874
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.9e-10 Score=92.68 Aligned_cols=167 Identities=18% Similarity=0.135 Sum_probs=121.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc----hhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++|++||||-+|-=|.-+|+.|+++||. |....|.....+. +.+.-...+.++..+.+|++|...+.++++++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~--VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v- 77 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYE--VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV- 77 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcE--EEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-
Confidence 3689999999999999999999999997 8887776433332 12222222446889999999999999999998
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC--
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-- 180 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~-- 180 (231)
++|-+.|.++.. +...+.++.+...+++..|++.++.+..-+-.+. .++..-||.
T Consensus 78 ----~PdEIYNLaAQS-----------~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~--------~rfYQAStSE~ 134 (345)
T COG1089 78 ----QPDEIYNLAAQS-----------HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKK--------TRFYQASTSEL 134 (345)
T ss_pred ----Cchhheeccccc-----------cccccccCcceeeeechhHHHHHHHHHHHhCCcc--------cEEEecccHHh
Confidence 789988888743 3556667777889999999999999875443211 255554443
Q ss_pred ccccC------CCCCCCccchhhhHHHHHHHHHHhhhhcc---ccCCc
Q 026924 181 VGSIG------DNRLGGWHSYRASKAALNHDKICVSGVWS---KEGSS 219 (231)
Q Consensus 181 ~~~~~------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~---~~gi~ 219 (231)
.|... ..|.-+.++|+++|.....++..++..+. .+||-
T Consensus 135 fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGIL 182 (345)
T COG1089 135 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGIL 182 (345)
T ss_pred hcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeeccee
Confidence 22221 12344567999999999999999988863 44554
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.7e-11 Score=95.87 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=77.7
Q ss_pred eEEEEecC-CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGa-s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.+=.||.. +||||+++|++|++.|++ |+++++... .. ... ...+|+++.+++.++++.+.+.+++
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~--Vvlv~~~~~-l~-------~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~ 80 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHE--VTLVTTKRA-LK-------PEP----HPNLSIREIETTKDLLITLKELVQE 80 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCE--EEEEcChhh-cc-------ccc----CCcceeecHHHHHHHHHHHHHHcCC
Confidence 45566666 679999999999999997 766665211 10 000 1358999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHh
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHM 156 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 156 (231)
+|++|||||+. ...++.+.+.++|++++. .+.+++.+..
T Consensus 81 iDiLVnnAgv~-------d~~~~~~~s~e~~~~~~~---~~~~~~~~~~ 119 (227)
T TIGR02114 81 HDILIHSMAVS-------DYTPVYMTDLEQVQASDN---LNEFLSKQNH 119 (227)
T ss_pred CCEEEECCEec-------cccchhhCCHHHHhhhcc---hhhhhccccc
Confidence 99999999976 356678888899987744 4555555533
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.2e-10 Score=95.80 Aligned_cols=156 Identities=21% Similarity=0.165 Sum_probs=108.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.++|||||+|.||++++.+|.+.+-.-.|.+.|..+.......+.......++..+.+|+.+..++.+.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence 4679999999999999999999999822258888887653333222222235689999999999877765554
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
+. .+||++.... .. .-..+.+..+++|+.|+.++++.+...-.+ ++|++||..-..+.
T Consensus 76 ~~-~Vvh~aa~~~--------~~---~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~----------~lIYtSs~~Vvf~g 133 (361)
T KOG1430|consen 76 GA-VVVHCAASPV--------PD---FVENDRDLAMRVNVNGTLNVIEACKELGVK----------RLIYTSSAYVVFGG 133 (361)
T ss_pred Cc-eEEEeccccC--------cc---ccccchhhheeecchhHHHHHHHHHHhCCC----------EEEEecCceEEeCC
Confidence 45 5666665432 11 111245678999999999999998755443 88888887533321
Q ss_pred C---------CCC--CccchhhhHHHHHHHHHHhhh
Q 026924 187 N---------RLG--GWHSYRASKAALNHDKICVSG 211 (231)
Q Consensus 187 ~---------~~~--~~~~y~~sK~a~~~~~~~l~~ 211 (231)
. |.| ....|+.||+--+.+++..+.
T Consensus 134 ~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~ 169 (361)
T KOG1430|consen 134 EPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG 169 (361)
T ss_pred eecccCCCCCCCccccccccchHHHHHHHHHHHhcC
Confidence 1 122 235899999999999998875
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.2e-09 Score=77.91 Aligned_cols=174 Identities=14% Similarity=0.135 Sum_probs=109.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc--
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-- 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~-- 105 (231)
-+.++|.||-|.+|.+++..|-+++|. |.-+|-.+.... +.-+.++.|-+=-++-+.+..++-+.+
T Consensus 3 agrVivYGGkGALGSacv~~Fkannyw--V~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~g 70 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYW--VLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQG 70 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeE--EEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence 356999999999999999999999996 665555432211 112233344333344455555555543
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
.++|.++|.||.+.-.+.. ..+ -....+-++...+....+-.+..-.+++..+ -+-......+..+
T Consensus 71 ekvDav~CVAGGWAGGnAk--sKd----l~KNaDLMwKQSvwtSaIsa~lAt~HLK~GG--------LL~LtGAkaAl~g 136 (236)
T KOG4022|consen 71 EKVDAVFCVAGGWAGGNAK--SKD----LVKNADLMWKQSVWTSAISAKLATTHLKPGG--------LLQLTGAKAALGG 136 (236)
T ss_pred cccceEEEeeccccCCCcc--hhh----hhhchhhHHHHHHHHHHHHHHHHHhccCCCc--------eeeecccccccCC
Confidence 4799999999987522221 111 1122333455555555555666666666543 3333333344444
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
.|++..|+.+|+|+++++++++.+-. |.|--.+ +|.|-..|+
T Consensus 137 ---TPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~-~ilPVTLDT 180 (236)
T KOG4022|consen 137 ---TPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAAL-TILPVTLDT 180 (236)
T ss_pred ---CCcccchhHHHHHHHHHHHHhcccccCCCCCceeE-EEeeeeccC
Confidence 78999999999999999999998853 4454434 777766653
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-09 Score=83.91 Aligned_cols=71 Identities=32% Similarity=0.435 Sum_probs=60.1
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
++|+||+|.+|+.++++|++.|++ |.+..|++++.+. ..++..+.+|+.|++++.+.++ +.|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~--V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~ 63 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHE--VTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADA 63 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSE--EEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred eEEECCCChHHHHHHHHHHHCCCE--EEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcch
Confidence 689999999999999999999986 8888998765443 4689999999999977765554 6899
Q ss_pred EEEccccC
Q 026924 111 LINASGIL 118 (231)
Q Consensus 111 lv~~ag~~ 118 (231)
+|+++|..
T Consensus 64 vi~~~~~~ 71 (183)
T PF13460_consen 64 VIHAAGPP 71 (183)
T ss_dssp EEECCHST
T ss_pred hhhhhhhh
Confidence 99999854
|
... |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=101.92 Aligned_cols=103 Identities=21% Similarity=0.337 Sum_probs=79.4
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||++++++|+++|++ |++++|+.... ...++.++.+|++|.+++.++++ .+|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~--Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al~-------~vD 63 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHE--VVGIARHRPDS---------WPSSADFIAADIRDATAVESAMT-------GAD 63 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCchhh---------cccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence 6999999999999999999999997 88888864321 12357789999999998877665 479
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+|||+|+... . .+++|+.++.++++++. +.+.+ ++|++||.
T Consensus 64 ~VVHlAa~~~---------~-----------~~~vNv~GT~nLLeAa~----~~gvk------r~V~iSS~ 104 (854)
T PRK05865 64 VVAHCAWVRG---------R-----------NDHINIDGTANVLKAMA----ETGTG------RIVFTSSG 104 (854)
T ss_pred EEEECCCccc---------c-----------hHHHHHHHHHHHHHHHH----HcCCC------eEEEECCc
Confidence 9999997431 1 35789999988887764 33322 89999984
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.2e-10 Score=86.92 Aligned_cols=85 Identities=24% Similarity=0.236 Sum_probs=69.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
+++||||+ |+|.+++++|++.|++ |++.+|+.+..+.+...... +.++.++++|++|++++.++++...++++++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~--V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFH--VSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCE--EEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 68999998 6777899999999997 77778876554444332322 45788899999999999999999999999999
Q ss_pred EEEEccccC
Q 026924 110 LLINASGIL 118 (231)
Q Consensus 110 ~lv~~ag~~ 118 (231)
++|+.+-..
T Consensus 78 ~lv~~vh~~ 86 (177)
T PRK08309 78 LAVAWIHSS 86 (177)
T ss_pred EEEEecccc
Confidence 999888654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.3e-09 Score=98.13 Aligned_cols=133 Identities=15% Similarity=0.032 Sum_probs=92.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.+++|||||+|.||+++++.|.++|++ |.. ...|++|.+.+.+++++. +
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~--v~~------------------------~~~~l~d~~~v~~~i~~~-----~ 428 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIA--YEY------------------------GKGRLEDRSSLLADIRNV-----K 428 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCe--EEe------------------------eccccccHHHHHHHHHhh-----C
Confidence 457999999999999999999999986 421 013677888887777664 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc---
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI--- 184 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~--- 184 (231)
+|+|||+|+... .+..+...++.++.+++|+.++..+++++... + .+++++||..-..
T Consensus 429 pd~Vih~Aa~~~--------~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-------~~~v~~Ss~~v~~~~~ 489 (668)
T PLN02260 429 PTHVFNAAGVTG--------RPNVDWCESHKVETIRANVVGTLTLADVCREN----G-------LLMMNFATGCIFEYDA 489 (668)
T ss_pred CCEEEECCcccC--------CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-------CeEEEEcccceecCCc
Confidence 899999998652 11122333455678999999999999998643 1 1445555432110
Q ss_pred ----------CC--CCCCCccchhhhHHHHHHHHHHhh
Q 026924 185 ----------GD--NRLGGWHSYRASKAALNHDKICVS 210 (231)
Q Consensus 185 ----------~~--~~~~~~~~y~~sK~a~~~~~~~l~ 210 (231)
.+ .+.+....|+.+|.+.+.+++.+.
T Consensus 490 ~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~ 527 (668)
T PLN02260 490 KHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD 527 (668)
T ss_pred ccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh
Confidence 00 112223579999999999998864
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=101.75 Aligned_cols=166 Identities=14% Similarity=0.141 Sum_probs=133.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..|.++|+||-||.|+.++.+|.++|++ .+++++|+.-+. +. .....+..|.+|..-..|++..+....++++. .
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar-~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~ 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGAR-KLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-N 1844 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCce-EEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-h
Confidence 3589999999999999999999999999 899999975332 22 23445555778888888998888888888775 5
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++.+++|.|... .+.-+++.+.+.|++.-+..+.++.++-+.....-.+-. ++|.+||+..-
T Consensus 1845 kl~~vGGiFnLA~VL-------RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~Ld--------yFv~FSSvscG 1909 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVL-------RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELD--------YFVVFSSVSCG 1909 (2376)
T ss_pred hcccccchhhHHHHH-------HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccc--------eEEEEEeeccc
Confidence 679999999999988 588999999999999999999999987665543322222 88888888766
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
.| ..|+..|+-+.++++.+++.=+.+
T Consensus 1910 RG---N~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1910 RG---NAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred CC---CCcccccchhhHHHHHHHHHhhhc
Confidence 66 678889999999999999774433
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-08 Score=84.88 Aligned_cols=167 Identities=16% Similarity=0.128 Sum_probs=108.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccc---hhhhhh-------cCCCceeEEEecCCChH--HHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATG---LLDLKN-------RFPERLDVLQLDLTVES--TIE 95 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~---~~~~~~-------~~~~~v~~~~~Dls~~~--~v~ 95 (231)
+++|+|||+|.||..+...|+.. -++ |++..|-+..... +.+... ...+++..+..|++.++ -=+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~k--v~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~ 78 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAK--VICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE 78 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCc--EEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH
Confidence 47999999999999999888864 345 7777776553332 222222 34578999999998442 112
Q ss_pred HHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEE
Q 026924 96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA 175 (231)
Q Consensus 96 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv 175 (231)
.-++++. ..+|.++||++... .+. ...+....|+.|+..+++.+... + . ..+.
T Consensus 79 ~~~~~La---~~vD~I~H~gA~Vn---------~v~-----pYs~L~~~NVlGT~evlrLa~~g----k-~-----Kp~~ 131 (382)
T COG3320 79 RTWQELA---ENVDLIIHNAALVN---------HVF-----PYSELRGANVLGTAEVLRLAATG----K-P-----KPLH 131 (382)
T ss_pred HHHHHHh---hhcceEEecchhhc---------ccC-----cHHHhcCcchHhHHHHHHHHhcC----C-C-----ceeE
Confidence 2233333 25899999998542 111 12356788999999988876421 1 1 2688
Q ss_pred EeccCccccCCC-----------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 176 NLSARVGSIGDN-----------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 176 ~iss~~~~~~~~-----------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
++||+.-..... .......|+-||++.+.+++. ....|+++. .+=||.|
T Consensus 132 yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~----A~~rGLpv~-I~Rpg~I 197 (382)
T COG3320 132 YVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE----AGDRGLPVT-IFRPGYI 197 (382)
T ss_pred EEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHH----HhhcCCCeE-EEecCee
Confidence 888875332110 112235799999999999876 444588844 7778765
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=83.78 Aligned_cols=99 Identities=13% Similarity=0.130 Sum_probs=66.6
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
+|||||+|.||.++++.|++.|++ |+..+|+....+.... .. ..|+.. . ...+.+..+|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~------~~----~~~~~~-~-------~~~~~~~~~D~ 60 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHE--VTILTRSPPAGANTKW------EG----YKPWAP-L-------AESEALEGADA 60 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCE--EEEEeCCCCCCCcccc------ee----eecccc-c-------chhhhcCCCCE
Confidence 689999999999999999999997 8888898765433211 00 112221 1 11223457999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhh
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP 158 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 158 (231)
|||+++... .. ...+.+..++.+++|+.++..+++++..
T Consensus 61 Vvh~a~~~~------~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~ 99 (292)
T TIGR01777 61 VINLAGEPI------AD---KRWTEERKQEIRDSRIDTTRALVEAIAA 99 (292)
T ss_pred EEECCCCCc------cc---ccCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence 999998542 11 1233344456788999999998888754
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-08 Score=92.75 Aligned_cols=131 Identities=13% Similarity=0.156 Sum_probs=85.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCcc-EEEEeecCCCCccc---hhhhh----------hcC--------CCcee
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATG---LLDLK----------NRF--------PERLD 82 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~-~vi~~~r~~~~~~~---~~~~~----------~~~--------~~~v~ 82 (231)
-+++|++|||||+|.||..++++|++.+.++ .|++..|....... +.+.+ +.. ..++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 3478999999999999999999999876431 57888886543222 21110 111 24789
Q ss_pred EEEecCCChHH-H-HHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhh
Q 026924 83 VLQLDLTVEST-I-EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL 160 (231)
Q Consensus 83 ~~~~Dls~~~~-v-~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l 160 (231)
++..|+++++- + ....+.+. ..+|+|||+|+... + .+.++..+++|+.++..+++.+...-
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~---~~vDiVIH~AA~v~----------f----~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIA---KEVDVIINSAANTT----------F----DERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHH---hcCCEEEECccccc----------c----ccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999998730 0 01112222 25899999998541 1 13456789999999999999875431
Q ss_pred hcCCCCcccCceEEEEeccCc
Q 026924 161 KVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 161 ~~~~~~~~~~~~~iv~iss~~ 181 (231)
.- .++|++||..
T Consensus 259 -~l--------k~fV~vSTay 270 (605)
T PLN02503 259 -KL--------KLFLQVSTAY 270 (605)
T ss_pred -CC--------CeEEEccCce
Confidence 11 1678877753
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.2e-08 Score=97.62 Aligned_cols=170 Identities=16% Similarity=0.135 Sum_probs=107.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCCCccchhhh---hhc-------CCCceeEEEecCCChHH--
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDL---KNR-------FPERLDVLQLDLTVEST-- 93 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~~~~~~~~~---~~~-------~~~~v~~~~~Dls~~~~-- 93 (231)
.+++||||++|.||.+++.+|++.| ....|+...|+....+..... ... ...++.++.+|++++.-
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5789999999999999999999987 222588888875443322211 111 12378899999986521
Q ss_pred HHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceE
Q 026924 94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 173 (231)
-...++++. ..+|++||||+... ... .+......|+.++..+++.+... +. .+
T Consensus 1051 ~~~~~~~l~---~~~d~iiH~Aa~~~-----------~~~---~~~~~~~~nv~gt~~ll~~a~~~----~~------~~ 1103 (1389)
T TIGR03443 1051 SDEKWSDLT---NEVDVIIHNGALVH-----------WVY---PYSKLRDANVIGTINVLNLCAEG----KA------KQ 1103 (1389)
T ss_pred CHHHHHHHH---hcCCEEEECCcEec-----------Ccc---CHHHHHHhHHHHHHHHHHHHHhC----CC------ce
Confidence 011223332 36899999998541 011 12334567999999999987532 21 27
Q ss_pred EEEeccCccccC-------------------CC------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 174 VANLSARVGSIG-------------------DN------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 174 iv~iss~~~~~~-------------------~~------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
++++||...... .. +......|+.||.+.+.+++..+. .|++++ .+-||.
T Consensus 1104 ~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~-i~Rpg~ 1178 (1389)
T TIGR03443 1104 FSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGC-IVRPGY 1178 (1389)
T ss_pred EEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEE-EECCCc
Confidence 889998643210 00 000123599999999999987533 478844 777776
Q ss_pred C
Q 026924 229 C 229 (231)
Q Consensus 229 ~ 229 (231)
|
T Consensus 1179 v 1179 (1389)
T TIGR03443 1179 V 1179 (1389)
T ss_pred c
Confidence 5
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.9e-08 Score=86.97 Aligned_cols=79 Identities=15% Similarity=0.236 Sum_probs=61.1
Q ss_pred cccCeEEEEecC----------------CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecC
Q 026924 25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 25 ~~~~k~~LVtGa----------------s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
+++||++||||| +|++|+++|+.|++.|++ |++++++.. .+. ... ...+|+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~--V~~v~~~~~-~~~--------~~~--~~~~dv 251 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD--VTLVSGPVN-LPT--------PAG--VKRIDV 251 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE--EEEeCCCcc-ccC--------CCC--cEEEcc
Confidence 578999999999 555999999999999997 777777652 110 111 346899
Q ss_pred CChHHHHHHHHHHHHHcCCccEEEEccccCC
Q 026924 89 TVESTIEASAKSIKEKYGSLNLLINASGILS 119 (231)
Q Consensus 89 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~ 119 (231)
++.+++.+.+. +.++++|++|||||+..
T Consensus 252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 252 ESAQEMLDAVL---AALPQADIFIMAAAVAD 279 (399)
T ss_pred CCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence 98888766665 45789999999999865
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-07 Score=78.80 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=59.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC-c
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS-L 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~-i 108 (231)
++|||||+|.+|++++++|++.|++ |.+..|+.+.... ..+..+.+|+.|.+++.++++.. +.+.. +
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~--V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~ 68 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVP--FLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI 68 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCc--EEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence 3899999999999999999999997 8888998765321 24556778999999998888653 22334 8
Q ss_pred cEEEEccc
Q 026924 109 NLLINASG 116 (231)
Q Consensus 109 d~lv~~ag 116 (231)
|.++++++
T Consensus 69 d~v~~~~~ 76 (285)
T TIGR03649 69 SAVYLVAP 76 (285)
T ss_pred eEEEEeCC
Confidence 99998876
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.5e-08 Score=78.24 Aligned_cols=158 Identities=15% Similarity=0.128 Sum_probs=108.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCC--CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+.+.+|||||.|.||...++.++.. .++ .+..+.=. ..+..+... ....+..++..|+.++..+..++..
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~--~v~idkL~~~s~~~~l~~~--~n~p~ykfv~~di~~~~~~~~~~~~-- 78 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYK--FVNLDKLDYCSNLKNLEPV--RNSPNYKFVEGDIADADLVLYLFET-- 78 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCc--EEEEeecccccccchhhhh--ccCCCceEeeccccchHHHHhhhcc--
Confidence 4488999999999999999999984 455 44444311 112222222 1245889999999999888777665
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.+|.|+|-|.... .+.+.-+--+....|+.++..+++.......- .++|.+|+..
T Consensus 79 ---~~id~vihfaa~t~-----------vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i---------~~fvhvSTde- 134 (331)
T KOG0747|consen 79 ---EEIDTVIHFAAQTH-----------VDRSFGDSFEFTKNNILSTHVLLEAVRVSGNI---------RRFVHVSTDE- 134 (331)
T ss_pred ---CchhhhhhhHhhhh-----------hhhhcCchHHHhcCCchhhhhHHHHHHhccCe---------eEEEEecccc-
Confidence 48999999998542 12222223346788999999999988655421 2889998753
Q ss_pred ccCCC----------CCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 183 SIGDN----------RLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 183 ~~~~~----------~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
++|.. ..-+-.+|+++|+|.+++++++.+.+.
T Consensus 135 VYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~ 176 (331)
T KOG0747|consen 135 VYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYG 176 (331)
T ss_pred eecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhccC
Confidence 32211 112234899999999999999998873
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.7e-08 Score=82.87 Aligned_cols=85 Identities=20% Similarity=0.088 Sum_probs=63.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC---CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++|+++|+|+ ||+|++++..|++.|++ .|.+++|+. ++.+.+.+.+......+....+|+++.+++.+.++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~-~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAK-EITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence 467899999999 69999999999999997 698999986 44555544443333455667789887766654433
Q ss_pred HHHcCCccEEEEccccC
Q 026924 102 KEKYGSLNLLINASGIL 118 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~ 118 (231)
..|+||||....
T Consensus 199 -----~~DilINaTp~G 210 (289)
T PRK12548 199 -----SSDILVNATLVG 210 (289)
T ss_pred -----cCCEEEEeCCCC
Confidence 459999998765
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.1e-07 Score=75.38 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=99.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
...+++++||||+|.||.++|.+|...|.. |++.|.-...... +..... ...+..+..|+..+ ++.+
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~--VIa~Dn~ftg~k~n~~~~~~--~~~fel~~hdv~~p-----l~~e--- 91 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHE--VIALDNYFTGRKENLEHWIG--HPNFELIRHDVVEP-----LLKE--- 91 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCe--EEEEecccccchhhcchhcc--CcceeEEEeechhH-----HHHH---
Confidence 346789999999999999999999999975 8887764333222 221111 23566666777554 3333
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+|-++|.|....|+... . ...+.+-+|+.++.+++..+....+ +++..|+.. +
T Consensus 92 ----vD~IyhLAapasp~~y~--~---------npvktIktN~igtln~lglakrv~a-----------R~l~aSTse-V 144 (350)
T KOG1429|consen 92 ----VDQIYHLAAPASPPHYK--Y---------NPVKTIKTNVIGTLNMLGLAKRVGA-----------RFLLASTSE-V 144 (350)
T ss_pred ----hhhhhhhccCCCCcccc--c---------CccceeeecchhhHHHHHHHHHhCc-----------eEEEeeccc-c
Confidence 47777777755422110 1 1235678999999999988765442 777666543 4
Q ss_pred cCCC--------------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 184 IGDN--------------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 184 ~~~~--------------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
+|.+ |....++|...|-+.+.|+..+.++.
T Consensus 145 Ygdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~ 188 (350)
T KOG1429|consen 145 YGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE 188 (350)
T ss_pred cCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhccc
Confidence 4321 22345689999999999999988775
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.7e-07 Score=86.10 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=74.6
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||++++++|++.|++ |++.+|..... ...++.++.+|+++.. +.+++ ..+|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~--Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D 62 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHT--VSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEAD 62 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCE--EEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCC
Confidence 5999999999999999999999996 88888754321 1236788999999873 33222 3589
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++||+++... .. ..++|+.++.++++++.. .+ .++|++||..
T Consensus 63 ~VIHLAa~~~-------~~------------~~~vNv~Gt~nLleAA~~----~G-------vRiV~~SS~~ 104 (699)
T PRK12320 63 AVIHLAPVDT-------SA------------PGGVGITGLAHVANAAAR----AG-------ARLLFVSQAA 104 (699)
T ss_pred EEEEcCccCc-------cc------------hhhHHHHHHHHHHHHHHH----cC-------CeEEEEECCC
Confidence 9999998531 10 124789999999888742 22 2788888764
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.5e-07 Score=73.61 Aligned_cols=144 Identities=20% Similarity=0.121 Sum_probs=100.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|-++-|.||+|.+|+-++++|++.|-+ |++-.|-++..-.-...... -+++.++..|+.|+++++++++.-
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQ--viiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk~s--- 131 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQ--VIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVKHS--- 131 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCe--EEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHHhC---
Confidence 567889999999999999999999999997 88877754332211111111 148999999999999999998864
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++|||..|.-. .-...+ ..++|..++-.+++.+. +.+.. ++|.+|+..+.
T Consensus 132 ----NVVINLIGrd~---------eTknf~------f~Dvn~~~aerlArick----e~GVe------rfIhvS~Lgan- 181 (391)
T KOG2865|consen 132 ----NVVINLIGRDY---------ETKNFS------FEDVNVHIAERLARICK----EAGVE------RFIHVSCLGAN- 181 (391)
T ss_pred ----cEEEEeecccc---------ccCCcc------cccccchHHHHHHHHHH----hhChh------heeehhhcccc-
Confidence 99999999532 112222 23567777777777664 33332 88989887644
Q ss_pred CCCCCCCccchhhhHHHHHHHHHH
Q 026924 185 GDNRLGGWHSYRASKAALNHDKIC 208 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~ 208 (231)
..+.+.|--+|++-+--++.
T Consensus 182 ----v~s~Sr~LrsK~~gE~aVrd 201 (391)
T KOG2865|consen 182 ----VKSPSRMLRSKAAGEEAVRD 201 (391)
T ss_pred ----ccChHHHHHhhhhhHHHHHh
Confidence 33445677777777665554
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.9e-07 Score=78.06 Aligned_cols=113 Identities=16% Similarity=0.217 Sum_probs=73.3
Q ss_pred cccCeEEEEecC---------------CCc-hhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecC
Q 026924 25 KWKGGVSLVQGA---------------SRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 25 ~~~~k~~LVtGa---------------s~g-IG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
+++||++||||| |+| +|.++|+.|+++|++ |++++++.... .+.. ...+|+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~--V~~~~g~~~~~---------~~~~--~~~~~v 248 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGAD--VTLITGPVSLL---------TPPG--VKSIKV 248 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCE--EEEeCCCCccC---------CCCC--cEEEEe
Confidence 478999999999 556 999999999999997 77766554321 1122 256899
Q ss_pred CChHHH-HHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhh
Q 026924 89 TVESTI-EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP 158 (231)
Q Consensus 89 s~~~~v-~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 158 (231)
++.+++ ++++++. ++++|++|+|||...+.+.......+.. -.+.+..++..+.-+++.+..
T Consensus 249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~-----~~~~~~l~L~~~pdil~~l~~ 311 (390)
T TIGR00521 249 STAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKK-----QGEELSLKLVKNPDIIAEVRK 311 (390)
T ss_pred ccHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccc-----cCCceeEEEEeCcHHHHHHHh
Confidence 998888 5555443 4789999999998753221111111111 112345666666666666543
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.5e-06 Score=75.09 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=55.1
Q ss_pred cCeEEEEe----cCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh----hhhc-CCCceeEEEecCCChHHHHHH
Q 026924 27 KGGVSLVQ----GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD----LKNR-FPERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 27 ~~k~~LVt----Gas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~----~~~~-~~~~v~~~~~Dls~~~~v~~~ 97 (231)
..+++||| ||+|.||..++++|+++|++ |.+++|+......+.. .... ....+.++.+|+.+ +.++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHE--VTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCE--EEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence 45789999 99999999999999999997 8888887654322110 0001 11247888899866 3322
Q ss_pred HHHHHHHcCCccEEEEccc
Q 026924 98 AKSIKEKYGSLNLLINASG 116 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag 116 (231)
+. ...+|+||++++
T Consensus 126 ~~-----~~~~d~Vi~~~~ 139 (378)
T PLN00016 126 VA-----GAGFDVVYDNNG 139 (378)
T ss_pred hc-----cCCccEEEeCCC
Confidence 21 136899999876
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.50 E-value=8.7e-07 Score=71.30 Aligned_cols=99 Identities=12% Similarity=0.190 Sum_probs=64.5
Q ss_pred eEEEEecCCCc-hhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~g-IG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.+-.||+.|+| ||+++|++|+++|++ |++++|+..... ....++.++.++ +..++.+.+.+.++.
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~--V~li~r~~~~~~-------~~~~~v~~i~v~-----s~~~m~~~l~~~~~~ 81 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHE--VTLVTTKTAVKP-------EPHPNLSIIEIE-----NVDDLLETLEPLVKD 81 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCE--EEEEECcccccC-------CCCCCeEEEEEe-----cHHHHHHHHHHHhcC
Confidence 36678877655 999999999999997 777776532111 002345555542 333334444445568
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhH
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 148 (231)
+|++|||||... ..+....+.++|.+++++|...
T Consensus 82 ~DivIh~AAvsd-------~~~~~~~~~~~~~~~~~v~~~~ 115 (229)
T PRK06732 82 HDVLIHSMAVSD-------YTPVYMTDLEEVSASDNLNEFL 115 (229)
T ss_pred CCEEEeCCccCC-------ceehhhhhhhhhhhhhhhhhhh
Confidence 999999999762 3445566777888887776543
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.4e-06 Score=72.53 Aligned_cols=173 Identities=21% Similarity=0.174 Sum_probs=110.1
Q ss_pred cccccCeEEEEecCC-CchhHHHHHHHHhcCCccEEEEeecCCCC--ccc---hhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 23 SVKWKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATG---LLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 23 ~~~~~~k~~LVtGas-~gIG~aia~~l~~~G~~~~vi~~~r~~~~--~~~---~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
...+.++++||||++ +.||-+++.+|++.|+. ||++..+-.. .+- +.......+..+..++.+.++..+|+.
T Consensus 391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAt--VI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA 468 (866)
T COG4982 391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGAT--VIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA 468 (866)
T ss_pred CCCcccceEEEecCCCcchHHHHHHHHHhCCcE--EEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence 346788999999998 78999999999999996 7777665332 222 222333446688899999999999999
Q ss_pred HHHHHHHHc----C----------CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhc
Q 026924 97 SAKSIKEKY----G----------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV 162 (231)
Q Consensus 97 ~~~~~~~~~----g----------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~ 162 (231)
+++.+.+.- | .++.+|--|... ..+.+.+..... +..+.+.+.+...++-.+.+.-..
T Consensus 469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-------v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~ 540 (866)
T COG4982 469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-------VSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSS 540 (866)
T ss_pred HHHHhccccccccCCcceecccccCcceeeecccCC-------ccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccc
Confidence 999996421 1 356666655533 234444443321 223444444444444333222111
Q ss_pred CCCCcccCceEEEEeccCc-cccCCCCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 163 GGTGIERDVAVVANLSARV-GSIGDNRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 163 ~~~~~~~~~~~iv~iss~~-~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
++...+ .+||.-.|.. |.. .+-+.|+-+|++++.++--+..|-
T Consensus 541 --r~v~~R-~hVVLPgSPNrG~F-----GgDGaYgEsK~aldav~~RW~sEs 584 (866)
T COG4982 541 --RGVDTR-LHVVLPGSPNRGMF-----GGDGAYGESKLALDAVVNRWHSES 584 (866)
T ss_pred --cCcccc-eEEEecCCCCCCcc-----CCCcchhhHHHHHHHHHHHhhccc
Confidence 111222 5677766654 333 344689999999999998877774
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-06 Score=76.56 Aligned_cols=134 Identities=16% Similarity=0.209 Sum_probs=88.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccc---hh--------hhhhc----CCCceeEEEec
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATG---LL--------DLKNR----FPERLDVLQLD 87 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~---~~--------~~~~~----~~~~v~~~~~D 87 (231)
-+++|+++||||+|.+|.-+++.|++. ..+ ++++.-|.....+. +. +.+.+ .-.++..+..|
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~-~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVK-RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcc-eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 468999999999999999999999984 344 57777775432211 11 11111 12478899999
Q ss_pred CCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCc
Q 026924 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI 167 (231)
Q Consensus 88 ls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~ 167 (231)
+++++-=-+--+.- .....+|++||+|+... -.+.++..+..|..|+..+++.+.....- +
T Consensus 88 i~~~~LGis~~D~~-~l~~eV~ivih~AAtvr--------------Fde~l~~al~iNt~Gt~~~l~lak~~~~l-~--- 148 (467)
T KOG1221|consen 88 ISEPDLGISESDLR-TLADEVNIVIHSAATVR--------------FDEPLDVALGINTRGTRNVLQLAKEMVKL-K--- 148 (467)
T ss_pred ccCcccCCChHHHH-HHHhcCCEEEEeeeeec--------------cchhhhhhhhhhhHhHHHHHHHHHHhhhh-h---
Confidence 98764211111111 11236899999998542 22456678999999999999988765433 2
Q ss_pred ccCceEEEEeccCccc
Q 026924 168 ERDVAVVANLSARVGS 183 (231)
Q Consensus 168 ~~~~~~iv~iss~~~~ 183 (231)
.++.+|+....
T Consensus 149 -----~~vhVSTAy~n 159 (467)
T KOG1221|consen 149 -----ALVHVSTAYSN 159 (467)
T ss_pred -----eEEEeehhhee
Confidence 77888877655
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.4e-06 Score=66.24 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=54.9
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
++|+||+|.+|+.+++.|++.|++ |.+..|+... +..+.++. ..+..+.+|+.|.+++.++++ .+|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~--V~~l~R~~~~--~~~~~l~~--~g~~vv~~d~~~~~~l~~al~-------g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS--VRALVRDPSS--DRAQQLQA--LGAEVVEADYDDPESLVAALK-------GVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC--EEEEESSSHH--HHHHHHHH--TTTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred CEEECCccHHHHHHHHHHHhCCCC--cEEEEeccch--hhhhhhhc--ccceEeecccCCHHHHHHHHc-------CCce
Confidence 689999999999999999999987 8888888722 22222222 244667999998887766655 6899
Q ss_pred EEEccccC
Q 026924 111 LINASGIL 118 (231)
Q Consensus 111 lv~~ag~~ 118 (231)
+|++.+..
T Consensus 68 v~~~~~~~ 75 (233)
T PF05368_consen 68 VFSVTPPS 75 (233)
T ss_dssp EEEESSCS
T ss_pred EEeecCcc
Confidence 99888743
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.3e-07 Score=69.92 Aligned_cols=84 Identities=18% Similarity=0.161 Sum_probs=61.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++++++|+||+|++|+++++.|++.|++ |++.+|+.+..+.+.+.+... .......+|..+.+++.+.++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~--V~l~~R~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~----- 96 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGAR--VVLVGRDLERAQKAADSLRAR-FGEGVGAVETSDDAARAAAIK----- 96 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhh-cCCcEEEeeCCCHHHHHHHHh-----
Confidence 578899999999999999999999999986 888899876665554433211 123455678888877765553
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
..|++|++....
T Consensus 97 --~~diVi~at~~g 108 (194)
T cd01078 97 --GADVVFAAGAAG 108 (194)
T ss_pred --cCCEEEECCCCC
Confidence 468888876543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.6e-06 Score=74.40 Aligned_cols=128 Identities=13% Similarity=-0.004 Sum_probs=83.3
Q ss_pred CeEEE----EecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 28 GGVSL----VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 28 ~k~~L----VtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|..+| |+||++|+|.+++..|...|+. |+...+........
T Consensus 34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~--v~~~~~~~~~~~~~--------------------------------- 78 (450)
T PRK08261 34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYD--VVANNDGGLTWAAG--------------------------------- 78 (450)
T ss_pred CCCCCCCceEEccCchhHHHHHHHHhhCCCe--eeecCccccccccC---------------------------------
Confidence 44555 7888899999999999999997 76654433211000
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
...+++.+|..+... .+.++ +.+.+.+.+..++.|... ++||++++..+.
T Consensus 79 ~~~~~~~~~~d~~~~--------------~~~~~--------l~~~~~~~~~~l~~l~~~--------griv~i~s~~~~ 128 (450)
T PRK08261 79 WGDRFGALVFDATGI--------------TDPAD--------LKALYEFFHPVLRSLAPC--------GRVVVLGRPPEA 128 (450)
T ss_pred cCCcccEEEEECCCC--------------CCHHH--------HHHHHHHHHHHHHhccCC--------CEEEEEcccccc
Confidence 001344333322211 00111 223445666677777543 399999987654
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
.+ ...|+++|+++.+++++++.|+ +++++ +|.|.|+.
T Consensus 129 ~~------~~~~~~akaal~gl~rsla~E~-~~gi~-v~~i~~~~ 165 (450)
T PRK08261 129 AA------DPAAAAAQRALEGFTRSLGKEL-RRGAT-AQLVYVAP 165 (450)
T ss_pred CC------chHHHHHHHHHHHHHHHHHHHh-hcCCE-EEEEecCC
Confidence 22 2469999999999999999999 78999 67888764
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-06 Score=71.02 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=69.6
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
++||||+|-||++++.+|.+.|.. |.+..|+....+... +..+. ..+. +++..+ .++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~--v~iltR~~~~~~~~~------~~~v~-------~~~~----~~~~~~--~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQ--VTILTRRPPKASQNL------HPNVT-------LWEG----LADALT--LGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCe--EEEEEcCCcchhhhc------Ccccc-------ccch----hhhccc--CCCCE
Confidence 589999999999999999999996 888889876654311 11111 1111 111111 17999
Q ss_pred EEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 111 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
|||.||... .-..++.+.=++.++.-+..+-.+.+ .+.+.+.. ..+..-+|..|.++.
T Consensus 60 vINLAG~~I---------~~rrWt~~~K~~i~~SRi~~T~~L~e----~I~~~~~~-----P~~~isaSAvGyYG~ 117 (297)
T COG1090 60 VINLAGEPI---------AERRWTEKQKEEIRQSRINTTEKLVE----LIAASETK-----PKVLISASAVGYYGH 117 (297)
T ss_pred EEECCCCcc---------ccccCCHHHHHHHHHHHhHHHHHHHH----HHHhccCC-----CcEEEecceEEEecC
Confidence 999999532 11225555555555555555544444 44433221 245555667777764
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.9e-05 Score=64.67 Aligned_cols=135 Identities=22% Similarity=0.224 Sum_probs=91.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
.+|||||+|.+|.+++++|.++|++ |....|+.+...... ..+.....|+.++..+...++ .++
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~--v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~ 65 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHE--VRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVD 65 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCE--EEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence 6899999999999999999999996 888889887665533 578888999999988876655 567
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
.+++..+... ... ..............+... . +. ..++.+|...+..
T Consensus 66 ~~~~i~~~~~--------~~~---------~~~~~~~~~~~~~a~~a~----~-~~------~~~~~~s~~~~~~----- 112 (275)
T COG0702 66 GVLLISGLLD--------GSD---------AFRAVQVTAVVRAAEAAG----A-GV------KHGVSLSVLGADA----- 112 (275)
T ss_pred EEEEEecccc--------ccc---------chhHHHHHHHHHHHHHhc----C-Cc------eEEEEeccCCCCC-----
Confidence 7777776531 000 012223334444444432 1 10 1566666544322
Q ss_pred CCccchhhhHHHHHHHHHHhhhhc
Q 026924 190 GGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.....|..+|...+...++....+
T Consensus 113 ~~~~~~~~~~~~~e~~l~~sg~~~ 136 (275)
T COG0702 113 ASPSALARAKAAVEAALRSSGIPY 136 (275)
T ss_pred CCccHHHHHHHHHHHHHHhcCCCe
Confidence 233579999999999888876664
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.9e-06 Score=62.67 Aligned_cols=78 Identities=24% Similarity=0.243 Sum_probs=57.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++++++|.|+ ||.|++++..|++.|++ .|.++.|+.++.+.+.+... +..+.... +.+.. +.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~-~i~i~nRt~~ra~~l~~~~~--~~~~~~~~--~~~~~----------~~ 72 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAK-EITIVNRTPERAEALAEEFG--GVNIEAIP--LEDLE----------EA 72 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSS-EEEEEESSHHHHHHHHHHHT--GCSEEEEE--GGGHC----------HH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHcC--ccccceee--HHHHH----------HH
Confidence 678999999998 78999999999999998 89999999888777666551 22343433 32222 11
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|++|++.+..
T Consensus 73 ~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 73 LQEADIVINATPSG 86 (135)
T ss_dssp HHTESEEEE-SSTT
T ss_pred HhhCCeEEEecCCC
Confidence 23679999998865
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.5e-06 Score=71.55 Aligned_cols=78 Identities=27% Similarity=0.327 Sum_probs=63.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+.+||.|+ |++|+.+|..|+++|.. .|.+++|+.++..++.+.. +.++.+.++|+.+.+++.+++++.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~-~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~~~------- 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDG-EVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIKDF------- 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHhcC-------
Confidence 46899999 89999999999999943 4999999987766654443 348999999999999887777752
Q ss_pred cEEEEccccC
Q 026924 109 NLLINASGIL 118 (231)
Q Consensus 109 d~lv~~ag~~ 118 (231)
|+|||++...
T Consensus 70 d~VIn~~p~~ 79 (389)
T COG1748 70 DLVINAAPPF 79 (389)
T ss_pred CEEEEeCCch
Confidence 9999998754
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=64.16 Aligned_cols=172 Identities=17% Similarity=0.093 Sum_probs=111.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhh----hcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLK----NRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~----~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.|++||||=+|-=|.-+++.|+.+|++ |..+-|....-+. +..+. ...+.....+-.|++|...+.+++..+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYe--VHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYE--VHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCce--eeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 469999999999999999999999998 6665565444433 22221 222456778889999999999999988
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++=+.|.|+... ...+.+-.+-.-++...|++.++.+...+-...+ .++-.-| ..
T Consensus 106 -----kPtEiYnLaAQSH-----------VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-------VrfYQAs-tS 161 (376)
T KOG1372|consen 106 -----KPTEVYNLAAQSH-----------VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-------VRFYQAS-TS 161 (376)
T ss_pred -----Cchhhhhhhhhcc-----------eEEEeecccceeeccchhhhhHHHHHHhcCcccc-------eeEEecc-cH
Confidence 4566666665332 2233333344567888999999998876544433 1333322 22
Q ss_pred cccC---------CCCCCCccchhhhHHHHHHHHHHhhhhc---cccCCceeeeccC
Q 026924 182 GSIG---------DNRLGGWHSYRASKAALNHDKICVSGVW---SKEGSSYMYSVAS 226 (231)
Q Consensus 182 ~~~~---------~~~~~~~~~y~~sK~a~~~~~~~l~~e~---~~~gi~~~~~v~p 226 (231)
-.+| ..|.-+.++|+++|.+...++-.++..+ +-+||- .|-=+|
T Consensus 162 ElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGIL-FNHESP 217 (376)
T KOG1372|consen 162 ELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGIL-FNHESP 217 (376)
T ss_pred hhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEe-ecCCCC
Confidence 2222 1123345689999998877776666554 556665 444444
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.8e-06 Score=65.72 Aligned_cols=83 Identities=19% Similarity=0.158 Sum_probs=49.4
Q ss_pred ccCeEEEEecCC----------------CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC
Q 026924 26 WKGGVSLVQGAS----------------RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89 (231)
Q Consensus 26 ~~~k~~LVtGas----------------~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls 89 (231)
|+||++|||+|. |.+|.++|++|+++|++ |+++++........ . ..+..+..+..|.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~--V~li~g~~~~~~~~--~--~~~~~~~~V~s~~- 73 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH--VIYLHGYFAEKPND--I--NNQLELHPFEGII- 73 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe--EEEEeCCCcCCCcc--c--CCceeEEEEecHH-
Confidence 478999999986 99999999999999997 66655432211110 0 0012233333322
Q ss_pred ChHHHHHHHHHHHHHcCCccEEEEccccCC
Q 026924 90 VESTIEASAKSIKEKYGSLNLLINASGILS 119 (231)
Q Consensus 90 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~ 119 (231)
+....+.++.+. ..+|++||+|+...
T Consensus 74 ---d~~~~l~~~~~~-~~~D~VIH~AAvsD 99 (229)
T PRK09620 74 ---DLQDKMKSIITH-EKVDAVIMAAAGSD 99 (229)
T ss_pred ---HHHHHHHHHhcc-cCCCEEEECccccc
Confidence 222222222211 26899999999754
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.3e-05 Score=70.90 Aligned_cols=77 Identities=25% Similarity=0.302 Sum_probs=55.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|+++|+|+++ +|+++|+.|++.|++ |.+.+++. +..+...+.+... .+.++..|..+ +
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~--V~~~d~~~~~~~~~~~~~l~~~--~~~~~~~~~~~------------~ 64 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAK--VILTDEKEEDQLKEALEELGEL--GIELVLGEYPE------------E 64 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhc--CCEEEeCCcch------------h
Confidence 56899999999887 999999999999997 88888864 2222222222222 35567777765 1
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
..+.+|+||+++|..
T Consensus 65 ~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 65 FLEGVDLVVVSPGVP 79 (450)
T ss_pred HhhcCCEEEECCCCC
Confidence 235789999999864
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00012 Score=63.09 Aligned_cols=129 Identities=20% Similarity=0.161 Sum_probs=79.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+-.++||.||+|++|+-+++.|.+.|+. |...-|+.+..+++.. +........-+..|.....++.. ++.+..+
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~--vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~---~~~~~~~ 151 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFS--VRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILK---KLVEAVP 151 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCe--eeeeccChhhhhhhhc-ccccccccceeeeccccccchhh---hhhhhcc
Confidence 4579999999999999999999999996 8888898877776544 11112233344444444433322 2222212
Q ss_pred -CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 107 -SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 107 -~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
...+++.++|.-. ... +..--..+...++.++++++...-.+ ++++++++.+...
T Consensus 152 ~~~~~v~~~~ggrp-------~~e-------d~~~p~~VD~~g~knlvdA~~~aGvk----------~~vlv~si~~~~~ 207 (411)
T KOG1203|consen 152 KGVVIVIKGAGGRP-------EEE-------DIVTPEKVDYEGTKNLVDACKKAGVK----------RVVLVGSIGGTKF 207 (411)
T ss_pred ccceeEEecccCCC-------Ccc-------cCCCcceecHHHHHHHHHHHHHhCCc----------eEEEEEeecCccc
Confidence 3467777776432 111 11122346667888888888433332 8999988776543
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.00 E-value=5e-05 Score=59.94 Aligned_cols=142 Identities=13% Similarity=0.021 Sum_probs=83.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCcc-EEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~-~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++||||++|-.|.+|.+.+.+.|... ..++.+.. .+|+++.+++++++.+. +
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence 589999999999999999999987720 12222221 27999999999999986 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc----
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS---- 183 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~---- 183 (231)
+..||+.|+..+ .-..-.....+-|+..++.| -++++.+-.+-.+ .++.+.|.+-.
T Consensus 56 PthVIhlAAmVG------Glf~N~~ynldF~r~Nl~in----dNVlhsa~e~gv~----------K~vsclStCIfPdkt 115 (315)
T KOG1431|consen 56 PTHVIHLAAMVG------GLFHNNTYNLDFIRKNLQIN----DNVLHSAHEHGVK----------KVVSCLSTCIFPDKT 115 (315)
T ss_pred CceeeehHhhhc------chhhcCCCchHHHhhcceec----hhHHHHHHHhchh----------hhhhhcceeecCCCC
Confidence 788888886542 01111122223333332222 2222222211111 23333332211
Q ss_pred ---------cCCCCCCCccchhhhHHHHHHHHHHhhhhcccc
Q 026924 184 ---------IGDNRLGGWHSYRASKAALNHDKICVSGVWSKE 216 (231)
Q Consensus 184 ---------~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~ 216 (231)
+..++-|..--|+-+|..+.-..+.++.+++..
T Consensus 116 ~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~ 157 (315)
T KOG1431|consen 116 SYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRD 157 (315)
T ss_pred CCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCc
Confidence 122234555679999988887778888777543
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.2e-05 Score=69.81 Aligned_cols=77 Identities=25% Similarity=0.368 Sum_probs=56.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
++|.|+ |.+|+.+++.|++.+-...|++.+|+.++++.+.+.. .+.++...++|+.|.+++.+++++ -|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~-------~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRG-------CDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTT-------SSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhc-------CCE
Confidence 689999 9999999999999874114999999988777654432 357999999999999988777654 499
Q ss_pred EEEcccc
Q 026924 111 LINASGI 117 (231)
Q Consensus 111 lv~~ag~ 117 (231)
|||++|.
T Consensus 71 Vin~~gp 77 (386)
T PF03435_consen 71 VINCAGP 77 (386)
T ss_dssp EEE-SSG
T ss_pred EEECCcc
Confidence 9999984
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.3e-05 Score=67.96 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=52.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|+++||||+|.||..+|++|+++ |.+ .+++.+|+.+.++.+.++.. ..|+. + +.+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~-~lilv~R~~~rl~~La~el~---------~~~i~---~-------l~~ 211 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVA-ELLLVARQQERLQELQAELG---------GGKIL---S-------LEE 211 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCC-EEEEEcCCHHHHHHHHHHhc---------cccHH---h-------HHH
Confidence 678999999999999999999999864 655 58888998766555443221 11221 1 223
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
.+...|++|++++..
T Consensus 212 ~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 212 ALPEADIVVWVASMP 226 (340)
T ss_pred HHccCCEEEECCcCC
Confidence 345789999999864
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=9.5e-05 Score=62.38 Aligned_cols=110 Identities=14% Similarity=0.024 Sum_probs=67.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++.++++|+|++|.+|..++..|+..|....+++.|++....+ ..++.. .... ....+.+++++.. +.+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~-a~Dl~~-~~~~--~~v~~~td~~~~~-------~~l 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV-AADLSH-IDTP--AKVTGYADGELWE-------KAL 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc-ccchhh-cCcC--ceEEEecCCCchH-------HHh
Confidence 4556899999999999999999996654325999998322221 122211 1112 2234555543321 222
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
..-|+||+++|... . +.+++.+.++.|+...-.+.+.+.++
T Consensus 75 ~gaDvVVitaG~~~--------~-----~~~tR~dll~~N~~i~~~i~~~i~~~ 115 (321)
T PTZ00325 75 RGADLVLICAGVPR--------K-----PGMTRDDLFNTNAPIVRDLVAAVASS 115 (321)
T ss_pred CCCCEEEECCCCCC--------C-----CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999642 1 11235567888888877777666544
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00031 Score=59.33 Aligned_cols=154 Identities=12% Similarity=0.019 Sum_probs=89.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.++++|||++|.+|..++..|+..|.-..+++.|.++...+ ..++... .... ...|+++.++.. +.+..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a~Dl~~~-~~~~--~i~~~~~~~d~~-------~~l~~ 86 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-AADVSHI-NTPA--QVRGFLGDDQLG-------DALKG 86 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-EchhhhC-CcCc--eEEEEeCCCCHH-------HHcCC
Confidence 35899999999999999999997665335999998772222 2222111 1111 222433333322 23347
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc----c
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG----S 183 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~----~ 183 (231)
.|++|+.||... . +...+.+.+..|......+.+.+.++-.+ +.++++|-..- .
T Consensus 87 aDiVVitAG~~~--------~-----~g~~R~dll~~N~~i~~~i~~~i~~~~p~---------aivivvSNPvD~~~~i 144 (323)
T PLN00106 87 ADLVIIPAGVPR--------K-----PGMTRDDLFNINAGIVKTLCEAVAKHCPN---------ALVNIISNPVNSTVPI 144 (323)
T ss_pred CCEEEEeCCCCC--------C-----CCCCHHHHHHHHHHHHHHHHHHHHHHCCC---------eEEEEeCCCccccHHH
Confidence 899999999742 1 11335667888888776666666544322 24444443332 1
Q ss_pred c-----CCCCCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 184 I-----GDNRLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 184 ~-----~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
. ...+.|....|+.++.-...|...++.++.
T Consensus 145 ~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 145 AAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred HHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 1 111244456788887555567777777664
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=5.6e-05 Score=66.79 Aligned_cols=78 Identities=17% Similarity=0.142 Sum_probs=50.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|||+++ +|+++|+.|++.|++ |++.+++........+.+...+. .+...+ +..++ .+
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~--V~~~d~~~~~~~~~~~~l~~~g~--~~~~~~--~~~~~---~~----- 66 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGAN--VTVNDGKPFSENPEAQELLEEGI--KVICGS--HPLEL---LD----- 66 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCE--EEEEcCCCccchhHHHHHHhcCC--EEEeCC--CCHHH---hc-----
Confidence 46789999999986 999999999999997 88888765443333222322232 222211 11111 11
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
..+|.||+++|+.
T Consensus 67 -~~~d~vV~s~gi~ 79 (447)
T PRK02472 67 -EDFDLMVKNPGIP 79 (447)
T ss_pred -CcCCEEEECCCCC
Confidence 1479999999875
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.2e-05 Score=62.09 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=64.7
Q ss_pred EEEEecCCCchhHHHHHHHHh----cCCccEEEEeecCCCCccchhhhh-hcCCC---ceeEEEecCCChHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLE----KNDKGCVIATCRNPNGATGLLDLK-NRFPE---RLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~----~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~---~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
-++|.||||.-|.-+++.++. .|.+ +-+.+||++++++..+.. +..+. ....+.||.+|++++.+++++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~s--lavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLS--LAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCce--EEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 489999999999999999999 7886 899999999988844333 33222 2337889999999999888875
Q ss_pred HHHcCCccEEEEccccC
Q 026924 102 KEKYGSLNLLINASGIL 118 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~ 118 (231)
.+++||+|-.
T Consensus 85 -------~vivN~vGPy 94 (423)
T KOG2733|consen 85 -------RVIVNCVGPY 94 (423)
T ss_pred -------EEEEeccccc
Confidence 8999999944
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00055 Score=53.17 Aligned_cols=78 Identities=18% Similarity=0.276 Sum_probs=44.6
Q ss_pred ccCeEEEEecC----------------CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC
Q 026924 26 WKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89 (231)
Q Consensus 26 ~~~k~~LVtGa----------------s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls 89 (231)
|+||++|||+| ||..|.++|+.++..|++ |.++..... ... +..+..+ ++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~--V~li~g~~~-~~~--------p~~~~~i--~v~ 67 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAE--VTLIHGPSS-LPP--------PPGVKVI--RVE 67 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-E--EEEEE-TTS-------------TTEEEE--E-S
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCE--EEEEecCcc-ccc--------cccceEE--Eec
Confidence 46888888876 468999999999999998 655555431 110 2233333 444
Q ss_pred ChHHHHHHHHHHHHHcCCccEEEEccccCC
Q 026924 90 VESTIEASAKSIKEKYGSLNLLINASGILS 119 (231)
Q Consensus 90 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~ 119 (231)
..++ +.+.+.+.++.-|++|++|+...
T Consensus 68 sa~e---m~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 68 SAEE---MLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp SHHH---HHHHHHHHGGGGSEEEE-SB--S
T ss_pred chhh---hhhhhccccCcceeEEEecchhh
Confidence 4444 44555555555699999999764
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00026 Score=53.12 Aligned_cols=76 Identities=20% Similarity=0.196 Sum_probs=51.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++++++|+|+ |++|.++++.|.+.|.. .|.+.+|+.+..+.+.+.... .. +..+..+.++. .
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~-~v~v~~r~~~~~~~~~~~~~~---~~--~~~~~~~~~~~----------~ 79 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAA-KIVIVNRTLEKAKALAERFGE---LG--IAIAYLDLEEL----------L 79 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHhh---cc--cceeecchhhc----------c
Confidence 56789999998 79999999999998733 488889987666554433321 10 22333333322 2
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
...|++|++.+..
T Consensus 80 ~~~Dvvi~~~~~~ 92 (155)
T cd01065 80 AEADLIINTTPVG 92 (155)
T ss_pred ccCCEEEeCcCCC
Confidence 4789999999754
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00026 Score=58.72 Aligned_cols=77 Identities=26% Similarity=0.325 Sum_probs=53.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.++.+.+.+...... .+ ..++ + ..+.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~-~V~v~~R~~~~a~~l~~~~~~~~-~~---~~~~----~-------~~~~ 182 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVA-EITIVNRTVERAEELAKLFGALG-KA---ELDL----E-------LQEE 182 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhhhcc-ce---eecc----c-------chhc
Confidence 467899999997 89999999999999954 59999999877666555433211 11 1111 0 0112
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|++||+....
T Consensus 183 ~~~~DivInaTp~g 196 (278)
T PRK00258 183 LADFDLIINATSAG 196 (278)
T ss_pred cccCCEEEECCcCC
Confidence 24679999998765
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0019 Score=49.59 Aligned_cols=72 Identities=22% Similarity=0.269 Sum_probs=58.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++.|+||||..|..|.+...++|.. |..+.||..+.... ..+...+.|+.|.+++.+.+ -+.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHe--VTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l-------~g~D 64 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHE--VTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDL-------AGHD 64 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCe--eEEEEeChHhcccc--------ccceeecccccChhhhHhhh-------cCCc
Confidence 5889999999999999999999997 88888988765432 35667889999998774333 3679
Q ss_pred EEEEccccC
Q 026924 110 LLINASGIL 118 (231)
Q Consensus 110 ~lv~~ag~~ 118 (231)
+||...|..
T Consensus 65 aVIsA~~~~ 73 (211)
T COG2910 65 AVISAFGAG 73 (211)
T ss_pred eEEEeccCC
Confidence 999888865
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00073 Score=53.82 Aligned_cols=149 Identities=19% Similarity=0.182 Sum_probs=96.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+...+||||+-|-+|..+|+.|-. -|.. .|++.|-.......... | -++-.|+-|...+++++-.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~-~VILSDI~KPp~~V~~~-----G---PyIy~DILD~K~L~eIVVn----- 108 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSE-CVILSDIVKPPANVTDV-----G---PYIYLDILDQKSLEEIVVN----- 108 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCc-cEehhhccCCchhhccc-----C---CchhhhhhccccHHHhhcc-----
Confidence 346899999999999999999965 5766 68887654433221110 1 1345688887777666554
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
.+||-+||-.+... .......--..++|+.|.-++++.+..+-. + +++-|+.|..|
T Consensus 109 ~RIdWL~HfSALLS------------AvGE~NVpLA~~VNI~GvHNil~vAa~~kL-----------~-iFVPSTIGAFG 164 (366)
T KOG2774|consen 109 KRIDWLVHFSALLS------------AVGETNVPLALQVNIRGVHNILQVAAKHKL-----------K-VFVPSTIGAFG 164 (366)
T ss_pred cccceeeeHHHHHH------------HhcccCCceeeeecchhhhHHHHHHHHcCe-----------e-EeecccccccC
Confidence 38999999876541 112222234578999999999998865543 3 44444444444
Q ss_pred C----CCCC------CccchhhhHHHHHHHHHHhhhhc
Q 026924 186 D----NRLG------GWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 186 ~----~~~~------~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
+ +|.| ....|+.||.-.+-+-+.+...+
T Consensus 165 PtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF 202 (366)
T KOG2774|consen 165 PTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF 202 (366)
T ss_pred CCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc
Confidence 2 1222 34579999998887777766655
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0031 Score=66.12 Aligned_cols=182 Identities=17% Similarity=0.135 Sum_probs=109.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+.++.++|++.+++++.+++.+|.++|+. |.++. ..+.. .......+..+-.+.+.--+.+++..+++.+.+.
T Consensus 1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~--v~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813 1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQ--VAVVR-SPWVV---SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred cccCceeEEEcCCcchHHHHHHHHHhCCCe--EEEee-ccccc---cccccccccccccccccccchHHHHHHHHhhhcc
Confidence 345788899888999999999999999997 44332 11111 1111111222233445555667888888888777
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.++++.+||..+.... ........ .....-...+...|.+.|.+.+.+...++ ..++.++...|-.
T Consensus 1826 ~~~~~g~i~l~~~~~~-----~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~------~~~~~vsr~~G~~ 1891 (2582)
T TIGR02813 1826 TAQIDGFIHLQPQHKS-----VADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNAR------ASFVTVSRIDGGF 1891 (2582)
T ss_pred ccccceEEEecccccc-----cccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCC------eEEEEEEecCCcc
Confidence 8899999998774420 00000000 01111123445567788887666554433 3788888877666
Q ss_pred CCCCCCCccc-----hhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 185 GDNRLGGWHS-----YRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 185 ~~~~~~~~~~-----y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
|......... -....+++.+|+|+++.|+..--+|.+ -+.|.
T Consensus 1892 g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~v-Dl~~~ 1938 (2582)
T TIGR02813 1892 GYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRAL-DLAPK 1938 (2582)
T ss_pred ccCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEE-eCCCC
Confidence 6311111000 123578999999999999987777754 55554
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00041 Score=57.24 Aligned_cols=75 Identities=24% Similarity=0.294 Sum_probs=52.1
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.++|+++|+|+ ||+|++++..|++.|++ |.+.+|+.++.+.+.+.....+ .+.....| + ...
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~--v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~---------~~~ 176 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCN--VIIANRTVSKAEELAERFQRYG-EIQAFSMD-----E---------LPL 176 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----h---------hcc
Confidence 45789999999 69999999999999986 8888998777666555443322 12222111 1 012
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
...|++||+.+..
T Consensus 177 ~~~DivInatp~g 189 (270)
T TIGR00507 177 HRVDLIINATSAG 189 (270)
T ss_pred cCccEEEECCCCC
Confidence 3689999999865
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0012 Score=56.06 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=28.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcC-------CccEEEEeecCCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKN-------DKGCVIATCRNPN 65 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G-------~~~~vi~~~r~~~ 65 (231)
+++|||++|.+|.+++..|+..+ .+ |++.|+++.
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~e--l~L~D~~~~ 44 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVI--LHLLDIPPA 44 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcE--EEEEEcCCc
Confidence 58999999999999999999855 34 888898653
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0015 Score=54.24 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=53.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|++++|+|+++++|.+++..+.+.|++ |++++++++..+.+.+ .+.+ ..+|..+.+..+.+.+... ..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~--~~ 212 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGAR--VIATASSAEGAELVRQ----AGAD---AVFNYRAEDLADRILAATA--GQ 212 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHHcC--CC
Confidence 5789999999999999999999999996 8888887654443322 2221 2245555544444433321 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|.+++++|
T Consensus 213 ~~d~vi~~~~ 222 (325)
T cd08253 213 GVDVIIEVLA 222 (325)
T ss_pred ceEEEEECCc
Confidence 6999999887
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0012 Score=54.86 Aligned_cols=49 Identities=24% Similarity=0.170 Sum_probs=41.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN 75 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~ 75 (231)
++++|+++|.|++ |.|++++..|++.|++ .|.+++|+.++.+.+.+.+.
T Consensus 124 ~~~~k~vlIlGaG-Gaaraia~aL~~~G~~-~I~I~nR~~~ka~~la~~l~ 172 (284)
T PRK12549 124 DASLERVVQLGAG-GAGAAVAHALLTLGVE-RLTIFDVDPARAAALADELN 172 (284)
T ss_pred CccCCEEEEECCc-HHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHHH
Confidence 3567899999985 7999999999999997 69999999888877665543
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0022 Score=55.68 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=52.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.|++||||++..+|+.+++.|.+.|++ |++++.+...... ....-.....++..-.+++...+.+.++.++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~--Vi~~d~~~~~~~~----~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~- 75 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHT--VILADSLKYPLSR----FSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE- 75 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHH----HHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence 3589999999999999999999999997 8888776533221 11112233333222234444444444444443
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|....
T Consensus 76 ~id~vIP~~e 85 (389)
T PRK06849 76 NIDLLIPTCE 85 (389)
T ss_pred CCCEEEECCh
Confidence 5899987664
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00083 Score=58.74 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=53.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++||.|+ |+.|+.++..|++.|+. .+.++.|+.++.+.+.+.. +. ...+ ..+ ++.+.
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~-~I~V~nRt~~ra~~La~~~---~~-~~~~-----~~~-------~l~~~ 239 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPK-QIMLANRTIEKAQKITSAF---RN-ASAH-----YLS-------ELPQL 239 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHh---cC-CeEe-----cHH-------HHHHH
Confidence 468899999999 79999999999999987 7999999877666555433 21 1111 112 22233
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
+..-|+||++.+..
T Consensus 240 l~~aDiVI~aT~a~ 253 (414)
T PRK13940 240 IKKADIIIAAVNVL 253 (414)
T ss_pred hccCCEEEECcCCC
Confidence 34679999988753
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0019 Score=53.69 Aligned_cols=81 Identities=20% Similarity=0.169 Sum_probs=54.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|++||.|+ ||-+++++..|++.|++ .|.+.+|+.++.+.+.+... ..+.... ...|. .+....
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~-~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~~---~~~~~~------ 191 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQ-KLQVADLDTSRAQALADVINNAVGREAV-VGVDA---RGIEDV------ 191 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHhhccCcceE-EecCH---hHHHHH------
Confidence 356889999998 68999999999999997 79999999888777665543 2222211 11221 111111
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
....|+|||+....
T Consensus 192 -~~~~divINaTp~G 205 (283)
T PRK14027 192 -IAAADGVVNATPMG 205 (283)
T ss_pred -HhhcCEEEEcCCCC
Confidence 12479999988654
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0012 Score=54.91 Aligned_cols=80 Identities=20% Similarity=0.135 Sum_probs=54.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++||.|+ ||-+++++..|++.|++ .|.+++|+.++.+.+.+..... ..+ .. +...++. .+.
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~-~i~I~nRt~~ka~~La~~~~~~-~~~--~~--~~~~~~~-------~~~ 187 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVT-DITVINRNPDKLSRLVDLGVQV-GVI--TR--LEGDSGG-------LAI 187 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHHhhhc-Ccc--ee--ccchhhh-------hhc
Confidence 357889999987 78999999999999997 7999999987777765544221 111 11 1111111 112
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|+|||+....
T Consensus 188 ~~~~DiVInaTp~g 201 (282)
T TIGR01809 188 EKAAEVLVSTVPAD 201 (282)
T ss_pred ccCCCEEEECCCCC
Confidence 24689999998754
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0024 Score=51.44 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=33.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
++++++++|.|.+ |+|..+++.|++.|.. .+.++|.+.-
T Consensus 8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg-~i~LvD~D~V 46 (231)
T cd00755 8 KLRNAHVAVVGLG-GVGSWAAEALARSGVG-KLTLIDFDVV 46 (231)
T ss_pred HHhCCCEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCCEE
Confidence 5778899999876 8999999999999998 8999987653
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0078 Score=46.03 Aligned_cols=146 Identities=15% Similarity=0.094 Sum_probs=86.3
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..+..++++.++|.||+|--|..+.+++++.+-=..|+++.|.+...... ++.+.-...|.+..++
T Consensus 11 rEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~------- 76 (238)
T KOG4039|consen 11 REDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQ------- 76 (238)
T ss_pred HHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHH-------
Confidence 34467788999999999999999999999987533688888876433321 3345555667644432
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
....+..+|+++|+-|... ...- .+ ..+.+.--=.+.+++.+. +.+- ..++.+||.
T Consensus 77 ~a~~~qg~dV~FcaLgTTR-------gkaG----ad---gfykvDhDyvl~~A~~AK----e~Gc------k~fvLvSS~ 132 (238)
T KOG4039|consen 77 LATNEQGPDVLFCALGTTR-------GKAG----AD---GFYKVDHDYVLQLAQAAK----EKGC------KTFVLVSSA 132 (238)
T ss_pred HHhhhcCCceEEEeecccc-------cccc----cC---ceEeechHHHHHHHHHHH----hCCC------eEEEEEecc
Confidence 2333458999999998542 1100 11 111111111122333332 2221 288989987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHh
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l 209 (231)
.+.. .+...|--.|.-++.=+..|
T Consensus 133 GAd~-----sSrFlY~k~KGEvE~~v~eL 156 (238)
T KOG4039|consen 133 GADP-----SSRFLYMKMKGEVERDVIEL 156 (238)
T ss_pred CCCc-----ccceeeeeccchhhhhhhhc
Confidence 6542 23345777777777655443
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0005 Score=54.20 Aligned_cols=44 Identities=27% Similarity=0.378 Sum_probs=36.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
.+++||+++|+|.+ .+|+.+++.|.+.|++ |++.+++.+..+..
T Consensus 24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~--Vvv~D~~~~~~~~~ 67 (200)
T cd01075 24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAK--LIVADINEEAVARA 67 (200)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH
Confidence 46789999999996 8999999999999997 77888876544443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.013 Score=49.38 Aligned_cols=37 Identities=24% Similarity=0.101 Sum_probs=28.0
Q ss_pred eEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPN 65 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~ 65 (231)
++++|+||+|++|.+++..|.. .+.-..+.+.++++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 4689999999999999998855 333214788888743
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0036 Score=51.22 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=53.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++||+||++- |+.+++.|.+.|++ |+...+++...+.+.. .....+..+.-+.+++.+++.+ .++|
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~--v~~s~~t~~~~~~~~~------~g~~~v~~g~l~~~~l~~~l~~-----~~i~ 67 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIE--ILVTVTTSEGKHLYPI------HQALTVHTGALDPQELREFLKR-----HSID 67 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCe--EEEEEccCCccccccc------cCCceEEECCCCHHHHHHHHHh-----cCCC
Confidence 6999999998 99999999999986 7777777765443322 1122344566677777666655 3799
Q ss_pred EEEEccc
Q 026924 110 LLINASG 116 (231)
Q Consensus 110 ~lv~~ag 116 (231)
+||..+.
T Consensus 68 ~VIDAtH 74 (256)
T TIGR00715 68 ILVDATH 74 (256)
T ss_pred EEEEcCC
Confidence 9998886
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0027 Score=54.11 Aligned_cols=40 Identities=20% Similarity=0.170 Sum_probs=34.8
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||+|..+++.|++.|.. .+.++|++.
T Consensus 19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg-~i~lvD~D~ 58 (338)
T PRK12475 19 QRKIREKHVLIVGA-GALGAANAEALVRAGIG-KLTIADRDY 58 (338)
T ss_pred HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence 45788999999997 57999999999999987 688888864
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0019 Score=53.55 Aligned_cols=81 Identities=27% Similarity=0.282 Sum_probs=57.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+.+++.++|.|++ |-+++++..|++.|++ .|.++.|+.++.+.+.+.....+..+. ..+..+.+..+
T Consensus 122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~-~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~-------- 189 (283)
T COG0169 122 VDVTGKRVLILGAG-GAARAVAFALAEAGAK-RITVVNRTRERAEELADLFGELGAAVE--AAALADLEGLE-------- 189 (283)
T ss_pred cccCCCEEEEECCc-HHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhhhcccccc--ccccccccccc--------
Confidence 34568999999986 7999999999999986 799999999998888777654443111 12222222111
Q ss_pred HcCCccEEEEccccCC
Q 026924 104 KYGSLNLLINASGILS 119 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~ 119 (231)
..|++||+....-
T Consensus 190 ---~~dliINaTp~Gm 202 (283)
T COG0169 190 ---EADLLINATPVGM 202 (283)
T ss_pred ---ccCEEEECCCCCC
Confidence 4699999987653
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0029 Score=52.76 Aligned_cols=83 Identities=22% Similarity=0.176 Sum_probs=51.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC---CccchhhhhhcC-CCceeEEEecCCChHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~---~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++++|++||.|++ |-+++++..|+..|++ .|.+++|+.+ +.+.+.+..... +..+.. .++ ++...
T Consensus 121 ~~~~k~vlvlGaG-GaarAi~~~l~~~g~~-~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~---~~~~~---- 189 (288)
T PRK12749 121 DIKGKTMVLLGAG-GASTAIGAQGAIEGLK-EIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDL---ADQQA---- 189 (288)
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCC-EEEEEeCCccHHHHHHHHHHHhhhccCceEEE--ech---hhhhh----
Confidence 4678999999985 4599999999999997 7999999865 444444433211 111111 122 11111
Q ss_pred HHHHcCCccEEEEccccC
Q 026924 101 IKEKYGSLNLLINASGIL 118 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~ 118 (231)
+.+.....|+|||+....
T Consensus 190 l~~~~~~aDivINaTp~G 207 (288)
T PRK12749 190 FAEALASADILTNGTKVG 207 (288)
T ss_pred hhhhcccCCEEEECCCCC
Confidence 112234689999987654
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0015 Score=42.55 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=22.6
Q ss_pred cC-eEEEEecCCCchhHH--HHHHHHhcCCccEEEEeecC
Q 026924 27 KG-GVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 27 ~~-k~~LVtGas~gIG~a--ia~~l~~~G~~~~vi~~~r~ 63 (231)
+| |++||+|+|+|.|++ |+..| ..|++ .+.+..+
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~--TiGV~fE 73 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF-GAGAD--TIGVSFE 73 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH-CC--E--EEEEE--
T ss_pred CCCceEEEEecCCcccHHHHHHHHh-cCCCC--EEEEeec
Confidence 55 899999999999999 66666 66776 6655554
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0051 Score=50.58 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=34.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.+++++.++|.|++ |+|..+++.|++.|.. .+.++|.+.-
T Consensus 26 ~kL~~s~VlVvG~G-GVGs~vae~Lar~GVg-~itLiD~D~V 65 (268)
T PRK15116 26 QLFADAHICVVGIG-GVGSWAAEALARTGIG-AITLIDMDDV 65 (268)
T ss_pred HHhcCCCEEEECcC-HHHHHHHHHHHHcCCC-EEEEEeCCEe
Confidence 46788899999876 8999999999999976 7998887643
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0061 Score=54.06 Aligned_cols=78 Identities=12% Similarity=0.176 Sum_probs=52.2
Q ss_pred cccCeEEEEecCC----------------CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecC
Q 026924 25 KWKGGVSLVQGAS----------------RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 25 ~~~~k~~LVtGas----------------~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
+|+||.+|||+|. |..|++||+.++..|++ |.++.-... .. .+..+..+. +
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~--VtlI~Gp~~-~~--------~p~~v~~i~--V 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE--VTLISGPVD-LA--------DPQGVKVIH--V 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc--EEEEeCCcC-CC--------CCCCceEEE--e
Confidence 5899999999874 57999999999999998 555443221 10 133444443 3
Q ss_pred CChHHHHHHHHHHHHHcCCccEEEEccccCC
Q 026924 89 TVESTIEASAKSIKEKYGSLNLLINASGILS 119 (231)
Q Consensus 89 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~ 119 (231)
. +.+++.+.+.+.++ .|++|++|....
T Consensus 320 ~---ta~eM~~av~~~~~-~Di~I~aAAVaD 346 (475)
T PRK13982 320 E---SARQMLAAVEAALP-ADIAIFAAAVAD 346 (475)
T ss_pred c---CHHHHHHHHHhhCC-CCEEEEeccccc
Confidence 2 34444555555454 699999999765
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.004 Score=52.23 Aligned_cols=79 Identities=18% Similarity=0.239 Sum_probs=54.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++++++|+|+++++|.+++..+...|++ |++++++++..+.+.. .+.. ...|..+.+..+.+.+.... +
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~--v~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~--~ 234 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGAT--VIATAGSEDKLERAKE----LGAD---YVIDYRKEDFVREVRELTGK--R 234 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCC---eEEecCChHHHHHHHHHhCC--C
Confidence 4789999999999999999999999997 7887777654433321 1221 22466665555555443322 3
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++++++|
T Consensus 235 ~~d~~i~~~g 244 (342)
T cd08266 235 GVDVVVEHVG 244 (342)
T ss_pred CCcEEEECCc
Confidence 6999999987
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.001 Score=60.11 Aligned_cols=46 Identities=30% Similarity=0.338 Sum_probs=38.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~ 73 (231)
++++|++||+|+ ||+|++++..|++.|++ |++++|+.++.+.+.+.
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~--V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGAR--VVIANRTYERAKELADA 421 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHH
Confidence 567899999999 59999999999999996 88889987666555443
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0048 Score=52.35 Aligned_cols=77 Identities=18% Similarity=0.288 Sum_probs=48.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-C
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-G 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~-g 106 (231)
|.++||+||+||+|...+......|+. ++.+..+.++.+.+.+ .+.+. ..|.++++ +.+++++.. +
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~--~v~~~~s~~k~~~~~~----lGAd~---vi~y~~~~----~~~~v~~~t~g 209 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGAT--VVAVVSSSEKLELLKE----LGADH---VINYREED----FVEQVRELTGG 209 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCc--EEEEecCHHHHHHHHh----cCCCE---EEcCCccc----HHHHHHHHcCC
Confidence 899999999999999999888889975 5444444433332222 23211 12343433 444554433 3
Q ss_pred -CccEEEEcccc
Q 026924 107 -SLNLLINASGI 117 (231)
Q Consensus 107 -~id~lv~~ag~ 117 (231)
.+|+++...|.
T Consensus 210 ~gvDvv~D~vG~ 221 (326)
T COG0604 210 KGVDVVLDTVGG 221 (326)
T ss_pred CCceEEEECCCH
Confidence 59999999884
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0073 Score=51.66 Aligned_cols=78 Identities=19% Similarity=0.208 Sum_probs=54.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH-c
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-Y 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~-~ 105 (231)
+|+.+||.||+||.|.+.+.-+...|+. .+++.++++..+.++.+ +.+ ...|..+++-+ +++++. .
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~--~v~t~~s~e~~~l~k~l----GAd---~vvdy~~~~~~----e~~kk~~~ 223 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAI--KVVTACSKEKLELVKKL----GAD---EVVDYKDENVV----ELIKKYTG 223 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCc--EEEEEcccchHHHHHHc----CCc---EeecCCCHHHH----HHHHhhcC
Confidence 5789999999999999999888888854 66666777665544433 211 22577664433 333332 4
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
.++|+|+-|.|.
T Consensus 224 ~~~DvVlD~vg~ 235 (347)
T KOG1198|consen 224 KGVDVVLDCVGG 235 (347)
T ss_pred CCccEEEECCCC
Confidence 689999999986
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.007 Score=47.73 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=34.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||+|..+++.|+..|.. .+.+.|.+.
T Consensus 16 q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~-~i~lvD~d~ 55 (202)
T TIGR02356 16 QQRLLNSHVLIIGA-GGLGSPAALYLAGAGVG-TIVIVDDDH 55 (202)
T ss_pred HHHhcCCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEecCCE
Confidence 45788999999995 58999999999999987 799988874
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0019 Score=53.95 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=59.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
..++|.||+|.-|.-+|++|+++|-. ..+.+||..+++.+...+ +.+...+++++ ++.++++. .+.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~--~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~-------~~~ 72 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLT--AALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMA-------SRT 72 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCc--hhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHH-------hcc
Confidence 57999999999999999999999997 788999998877765543 56666677766 44433333 367
Q ss_pred cEEEEccccC
Q 026924 109 NLLINASGIL 118 (231)
Q Consensus 109 d~lv~~ag~~ 118 (231)
++|+||+|-+
T Consensus 73 ~VVlncvGPy 82 (382)
T COG3268 73 QVVLNCVGPY 82 (382)
T ss_pred eEEEeccccc
Confidence 9999999954
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.013 Score=49.68 Aligned_cols=104 Identities=13% Similarity=0.020 Sum_probs=60.0
Q ss_pred EEEecCCCchhHHHHHHHHhcCCcc-----EEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHH--HH--HHHH
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIE--AS--AKSI 101 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~-----~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~--~~--~~~~ 101 (231)
+.|+|++|.+|..++..|+..|.-. .+++.|+++... .......|+.+..... .. ....
T Consensus 2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~~ 69 (324)
T TIGR01758 2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHDP 69 (324)
T ss_pred EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCCh
Confidence 7899999999999999999865420 288888865431 1122234444433110 00 0012
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG 163 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~ 163 (231)
.+.+...|++|+.||... . +.+++.+.++.|+.-. +.+.+.+.+.
T Consensus 70 ~~~~~~aDiVVitAG~~~--------~-----~~~tr~~ll~~N~~i~----k~i~~~i~~~ 114 (324)
T TIGR01758 70 AVAFTDVDVAILVGAFPR--------K-----EGMERRDLLSKNVKIF----KEQGRALDKL 114 (324)
T ss_pred HHHhCCCCEEEEcCCCCC--------C-----CCCcHHHHHHHHHHHH----HHHHHHHHhh
Confidence 344567999999999642 1 1123455667676544 4555555443
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0064 Score=46.52 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=32.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
+++||++||.|++.-.|..+++.|.++|++ |.++.|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~--V~v~~r~ 77 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNAT--VTVCHSK 77 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCE--EEEEECC
Confidence 689999999999766799999999999996 8887775
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0046 Score=52.09 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=50.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|++|++|..++..+...|++ |+.+++++++.+.+.+ .+.+. ..|..+.+...+.+.... -+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~--Vi~~~~s~~~~~~~~~----lGa~~---vi~~~~~~~~~~~~~~~~--~~ 206 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKVAYLKK----LGFDV---AFNYKTVKSLEETLKKAS--PD 206 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCCE---EEeccccccHHHHHHHhC--CC
Confidence 4789999999999999998887788996 7777776654443322 23221 123333223333333332 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|+++.+.|
T Consensus 207 gvdvv~d~~G 216 (325)
T TIGR02825 207 GYDCYFDNVG 216 (325)
T ss_pred CeEEEEECCC
Confidence 6899998876
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0052 Score=52.13 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=49.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|++|++|.+++..+...|++ |+.+++++++.+.+.+. .+.+. ..|..+.++..+.+.+.. . +
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~--Vi~~~~~~~~~~~~~~~---lGa~~---vi~~~~~~~~~~~i~~~~-~-~ 220 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCY--VVGSAGSDEKVDLLKNK---LGFDD---AFNYKEEPDLDAALKRYF-P-N 220 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHh---cCCce---eEEcCCcccHHHHHHHhC-C-C
Confidence 4789999999999999999888889996 77777776554443331 22211 123222223322233222 1 4
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 221 gvd~v~d~~g 230 (338)
T cd08295 221 GIDIYFDNVG 230 (338)
T ss_pred CcEEEEECCC
Confidence 6899888776
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.049 Score=45.63 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=33.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.+.+++++|.|. |++|+.++..|.+.|++ |.+++|+.+.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~--V~v~~r~~~~ 187 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGAN--VTVGARKSAH 187 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHH
Confidence 567899999998 57999999999999996 8888888543
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0075 Score=49.98 Aligned_cols=80 Identities=15% Similarity=0.239 Sum_probs=52.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++++++|+|+++++|.+++..+...|++ |++++++.+..+.+.+ .+.+ ...|..+.+...++.+... .+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~--v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~--~~ 207 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGAR--VIATAGSEEKLEACRA----LGAD---VAINYRTEDFAEEVKEATG--GR 207 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHH----cCCC---EEEeCCchhHHHHHHHHhC--CC
Confidence 5789999999999999999999999997 7877776544333321 2221 2244444333333333221 14
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|.++++.|.
T Consensus 208 ~~d~vi~~~g~ 218 (323)
T cd05276 208 GVDVILDMVGG 218 (323)
T ss_pred CeEEEEECCch
Confidence 69999999873
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.014 Score=49.39 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=47.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCcc-----EEEEeecCC--CCccchhhhhhcCCCceeEEEecCCChHHH----HHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVESTI----EASA 98 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~-----~vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v----~~~~ 98 (231)
++.|||++|.+|..++..|+..|.-. .+++.|+++ +.++. ...|+.+.... ..+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g--------------~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG--------------VVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce--------------eeeehhhhcccccCCcEEe
Confidence 58999999999999999999866431 288888876 33222 22333332100 0000
Q ss_pred HHHHHHcCCccEEEEccccC
Q 026924 99 KSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~ 118 (231)
....+.+...|++|+.||..
T Consensus 68 ~~~~~~~~~aDiVVitAG~~ 87 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFP 87 (323)
T ss_pred cChHHHhCCCCEEEEeCCCC
Confidence 12234456789999999964
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0059 Score=51.23 Aligned_cols=75 Identities=29% Similarity=0.440 Sum_probs=48.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.++||+|+++++|++++..+...|++ |+.+.++.+..+.+ ...+.. .. .|. +++ .+.+. ...
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~~~~-~~--~~~---~~~---~~~~~-~~~ 225 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGAR--VIAVTRSPEKLKIL----KELGAD-YV--IDG---SKF---SEDVK-KLG 225 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCe--EEEEeCCHHHHHHH----HHcCCc-EE--Eec---HHH---HHHHH-hcc
Confidence 4679999999999999999999999997 77777765443333 212221 11 122 112 22222 223
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++++++|.
T Consensus 226 ~~d~v~~~~g~ 236 (332)
T cd08259 226 GADVVIELVGS 236 (332)
T ss_pred CCCEEEECCCh
Confidence 79999999873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0045 Score=51.58 Aligned_cols=39 Identities=18% Similarity=0.298 Sum_probs=34.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
++.|++++|+|. |++|+++++.|...|++ |.+.+|+.+.
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~--V~v~~R~~~~ 186 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGAR--VFVGARSSAD 186 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCE--EEEEeCCHHH
Confidence 678999999999 56999999999999996 8888887654
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0093 Score=50.76 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=50.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|+..+..+...|++ .|+++++++++.+.+.+ .+.+. ..|..+. ++.+ +.+..+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~-~~~~----~~~~~g 234 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAA-EIVCADVSPRSLSLARE----MGADK---LVNPQND-DLDH----YKAEKG 234 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEeCCHHHHHHHHH----cCCcE---EecCCcc-cHHH----HhccCC
Confidence 5889999986 89999999888888986 58888888766554332 23221 1243332 2222 222235
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 235 ~~D~vid~~G~ 245 (343)
T PRK09880 235 YFDVSFEVSGH 245 (343)
T ss_pred CCCEEEECCCC
Confidence 68999998873
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.014 Score=48.37 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=50.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.|.|++|++|+|+.|.-. -++++ +|++ |+...-.+++.+-+.+.+ +-+. -.|-..+ ++.+.+++..
T Consensus 150 ~GetvvVSaAaGaVGsvv-gQiAKlkG~r--VVGiaGg~eK~~~l~~~l---GfD~---~idyk~~----d~~~~L~~a~ 216 (340)
T COG2130 150 AGETVVVSAAAGAVGSVV-GQIAKLKGCR--VVGIAGGAEKCDFLTEEL---GFDA---GIDYKAE----DFAQALKEAC 216 (340)
T ss_pred CCCEEEEEecccccchHH-HHHHHhhCCe--EEEecCCHHHHHHHHHhc---CCce---eeecCcc----cHHHHHHHHC
Confidence 489999999999999754 45554 7886 887766665544444322 2111 1244333 3445555555
Q ss_pred C-CccEEEEcccc
Q 026924 106 G-SLNLLINASGI 117 (231)
Q Consensus 106 g-~id~lv~~ag~ 117 (231)
| .||+.+-|+|.
T Consensus 217 P~GIDvyfeNVGg 229 (340)
T COG2130 217 PKGIDVYFENVGG 229 (340)
T ss_pred CCCeEEEEEcCCc
Confidence 5 59999999994
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.013 Score=50.80 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=33.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++++++|.|+ ||+|..++..|+..|.. .+.++|++.
T Consensus 131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d~ 169 (376)
T PRK08762 131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHDV 169 (376)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 4678889999966 68999999999999998 799998873
|
|
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=45.14 Aligned_cols=114 Identities=14% Similarity=0.108 Sum_probs=75.7
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.-+++||+++=.|++.|+ ++...+-.|++ .|+.++.+.+..+.+.+-..+..+++.++.+|+++..
T Consensus 41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~-~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~---------- 106 (198)
T COG2263 41 RGDLEGKTVLDLGAGTGI---LAIGAALLGAS-RVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR---------- 106 (198)
T ss_pred cCCcCCCEEEEcCCCcCH---HHHHHHhcCCc-EEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC----------
Confidence 347889999999998765 22333445777 7999999998888876665556779999999997764
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHH
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH 155 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 155 (231)
++.|.+|.|+.++. ...+.+.++-+.-.+--+-.+..+-.++..+.+.
T Consensus 107 ---~~~dtvimNPPFG~--~~rhaDr~Fl~~Ale~s~vVYsiH~a~~~~f~~~ 154 (198)
T COG2263 107 ---GKFDTVIMNPPFGS--QRRHADRPFLLKALEISDVVYSIHKAGSRDFVEK 154 (198)
T ss_pred ---CccceEEECCCCcc--ccccCCHHHHHHHHHhhheEEEeeccccHHHHHH
Confidence 67899999998763 1222333444433333334455555554444433
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.024 Score=50.76 Aligned_cols=83 Identities=20% Similarity=0.172 Sum_probs=54.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC-------------ChH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-------------VES 92 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls-------------~~~ 92 (231)
..+.+++|.|+ |.+|+..+..+...|+. |++.+++.+..+...+ .+. .++..|.. +.+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~--V~v~d~~~~rle~a~~----lGa--~~v~v~~~e~g~~~~gYa~~~s~~ 232 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAI--VRAFDTRPEVKEQVQS----MGA--EFLELDFKEEGGSGDGYAKVMSEE 232 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCC--eEEeccccccccccccceeecCHH
Confidence 34678999996 78999999999999996 8888887765443322 222 23333331 123
Q ss_pred HHHHHHHHHHHHcCCccEEEEcccc
Q 026924 93 TIEASAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag~ 117 (231)
..++..+.+.++....|++|+++-+
T Consensus 233 ~~~~~~~~~~e~~~~~DIVI~Tali 257 (511)
T TIGR00561 233 FIAAEMELFAAQAKEVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHHHHhCCCCEEEECccc
Confidence 3444444455556789999999943
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.01 Score=48.29 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=35.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||+|..+++.|+..|.. .+.++|.+.
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~ 66 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGVG-TLTLVDFDT 66 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence 45778999999998 79999999999999997 799888764
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.058 Score=45.38 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=49.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC----CCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF----PERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++.|.|+ |++|.+++..|+..|....|++++++++..+.....+... +....... .+.+ .+
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~-----------~l 66 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS-----------DC 66 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH-----------Hh
Confidence 5788896 8999999999999995225999999988776654433221 12222221 1221 12
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
..-|++|+++|..
T Consensus 67 ~~aDIVIitag~~ 79 (306)
T cd05291 67 KDADIVVITAGAP 79 (306)
T ss_pred CCCCEEEEccCCC
Confidence 4689999999864
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0085 Score=51.23 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=48.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|++|++|...+..+...|++ |+.+++++++.+.+.+ ..+.+. ..|-.+.+++.+.+.+.. .+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~--Vi~~~~~~~k~~~~~~---~lGa~~---vi~~~~~~~~~~~i~~~~--~~ 227 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCY--VVGSAGSSQKVDLLKN---KLGFDE---AFNYKEEPDLDAALKRYF--PE 227 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHH---hcCCCE---EEECCCcccHHHHHHHHC--CC
Confidence 4789999999999999998888888996 7777776654443321 123211 123322222332233221 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 228 gvD~v~d~vG 237 (348)
T PLN03154 228 GIDIYFDNVG 237 (348)
T ss_pred CcEEEEECCC
Confidence 5888888776
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.035 Score=49.15 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=48.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|+++|+|.+ ++|.++|+.|+++|++ |.+.|.+..... ..+ ++.....+.++..+.. .. .
T Consensus 2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~--v~~~d~~~~~~~-~~~-l~~~~~gi~~~~g~~~-~~-----------~ 64 (445)
T PRK04308 2 TFQNKKILVAGLG-GTGISMIAYLRKNGAE--VAAYDAELKPER-VAQ-IGKMFDGLVFYTGRLK-DA-----------L 64 (445)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCCchh-HHH-HhhccCCcEEEeCCCC-HH-----------H
Confidence 3578899999986 8999999999999997 777776554311 111 2111123333332211 11 1
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|.||..+|+.
T Consensus 65 ~~~~d~vv~spgi~ 78 (445)
T PRK04308 65 DNGFDILALSPGIS 78 (445)
T ss_pred HhCCCEEEECCCCC
Confidence 13579999999975
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.017 Score=46.50 Aligned_cols=42 Identities=19% Similarity=0.142 Sum_probs=35.8
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
+.++++++++|.|++ |+|.++++.|++.|.. .+.++|.+.-.
T Consensus 22 q~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg-~i~lvD~D~ve 63 (231)
T PRK08328 22 QEKLKKAKVAVVGVG-GLGSPVAYYLAAAGVG-RILLIDEQTPE 63 (231)
T ss_pred HHHHhCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCCccC
Confidence 447788999999886 8999999999999998 89888876544
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.015 Score=49.65 Aligned_cols=40 Identities=23% Similarity=0.188 Sum_probs=35.1
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||||..+++.|++.|.. .+.++|.+.
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg-~i~lvD~D~ 58 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVG-KVTIVDRDY 58 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCc
Confidence 44778899999999 68999999999999997 799999864
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.015 Score=49.26 Aligned_cols=44 Identities=25% Similarity=0.205 Sum_probs=37.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~ 73 (231)
+|++++|+|.+ |+|...+......|++ |+..++++++.+...++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~--Via~~~~~~K~e~a~~l 209 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAE--VIAITRSEEKLELAKKL 209 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCe--EEEEeCChHHHHHHHHh
Confidence 48999999999 9999888888889986 99999999887765554
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.017 Score=49.99 Aligned_cols=76 Identities=22% Similarity=0.132 Sum_probs=50.5
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+.+++++|+|+ |.+|+..+..+.+.|++ |.+++++.+..+.+... .+.. +..+..+.+.+.+.+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~--V~v~d~~~~~~~~l~~~---~g~~---v~~~~~~~~~l~~~l------- 228 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGAT--VTILDINIDRLRQLDAE---FGGR---IHTRYSNAYEIEDAV------- 228 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHh---cCce---eEeccCCHHHHHHHH-------
Confidence 45677999988 68999999999999996 88889876554433222 2222 223444444443332
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
...|++|++++.
T Consensus 229 ~~aDvVI~a~~~ 240 (370)
T TIGR00518 229 KRADLLIGAVLI 240 (370)
T ss_pred ccCCEEEEcccc
Confidence 357999998864
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.04 Score=49.49 Aligned_cols=84 Identities=23% Similarity=0.174 Sum_probs=54.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-------------H
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-------------S 92 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-------------~ 92 (231)
..+.+++|+|++ .+|+..+..+...|++ |++.|+++++.+...+ .|.+. +..|..+. +
T Consensus 163 ~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~--V~a~D~~~~rle~aes----lGA~~--v~i~~~e~~~~~~gya~~~s~~ 233 (509)
T PRK09424 163 VPPAKVLVIGAG-VAGLAAIGAAGSLGAI--VRAFDTRPEVAEQVES----MGAEF--LELDFEEEGGSGDGYAKVMSEE 233 (509)
T ss_pred cCCCEEEEECCc-HHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCeE--EEeccccccccccchhhhcchh
Confidence 357899999986 7999999999999996 9999998876554333 23332 22333221 1
Q ss_pred HHHHHHHHHHHHcCCccEEEEccccC
Q 026924 93 TIEASAKSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag~~ 118 (231)
..++..+.+.+..+..|++|.+++..
T Consensus 234 ~~~~~~~~~~~~~~gaDVVIetag~p 259 (509)
T PRK09424 234 FIKAEMALFAEQAKEVDIIITTALIP 259 (509)
T ss_pred HHHHHHHHHHhccCCCCEEEECCCCC
Confidence 11222222233335799999999964
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.025 Score=41.80 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=28.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+++|.|+ ||+|..+++.|++.|.. .+.+.|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~-~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVG-KITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCC-EEEEEcCCC
Confidence 3788887 79999999999999997 788888764
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.017 Score=40.32 Aligned_cols=37 Identities=30% Similarity=0.340 Sum_probs=29.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
++++||.+||.|| |.+|..=++.|++.|++ |.+++.+
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~--v~vis~~ 39 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAK--VTVISPE 39 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBE--EEEEESS
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEECCc
Confidence 4789999999999 68999999999999997 6666665
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.009 Score=50.37 Aligned_cols=74 Identities=23% Similarity=0.175 Sum_probs=50.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+.+++++|.|+ |.+|+.+++.|.+.|.+ .|++++|+.++.+.+.+.. +.. .+ +.+++.+.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~-~V~v~~r~~~ra~~la~~~---g~~--~~-----~~~~~~~~l------- 236 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVA-EITIANRTYERAEELAKEL---GGN--AV-----PLDELLELL------- 236 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHc---CCe--EE-----eHHHHHHHH-------
Confidence 57899999988 89999999999998876 6888999876655544332 221 11 122222222
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
...|++|.+.+..
T Consensus 237 ~~aDvVi~at~~~ 249 (311)
T cd05213 237 NEADVVISATGAP 249 (311)
T ss_pred hcCCEEEECCCCC
Confidence 3579999998843
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.013 Score=49.59 Aligned_cols=79 Identities=10% Similarity=0.114 Sum_probs=48.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+.++||+|++|++|.+.+..+...|+. .|+.+++++++.+.+.+. .+.+- ..|..+ +++.+.+.++.. +.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~-~Vi~~~~s~~~~~~~~~~---lGa~~---vi~~~~-~~~~~~i~~~~~--~g 224 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCS-RVVGICGSDEKCQLLKSE---LGFDA---AINYKT-DNVAERLRELCP--EG 224 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHHh---cCCcE---EEECCC-CCHHHHHHHHCC--CC
Confidence 379999999999999998877778983 388777766544433331 23221 123222 223333333321 46
Q ss_pred ccEEEEccc
Q 026924 108 LNLLINASG 116 (231)
Q Consensus 108 id~lv~~ag 116 (231)
+|+++.+.|
T Consensus 225 vd~vid~~g 233 (345)
T cd08293 225 VDVYFDNVG 233 (345)
T ss_pred ceEEEECCC
Confidence 899998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.032 Score=43.94 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=34.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
..+++.++++|.|+ ||+|..++..|++.|.. .+.+.|.+
T Consensus 16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg-~i~lvD~D 54 (200)
T TIGR02354 16 VQKLEQATVAICGL-GGLGSNVAINLARAGIG-KLILVDFD 54 (200)
T ss_pred HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEECCC
Confidence 34778899999998 57999999999999997 69999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.03 Score=45.42 Aligned_cols=80 Identities=10% Similarity=0.111 Sum_probs=52.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+.++++++++|.|++ |+|..++..|++.|.. .+.++|.+.-....+. .++.+...|+- ...++.+.+++.
T Consensus 19 q~~L~~~~VlvvG~G-glGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~-------RQ~l~~~~diG-~~Ka~~a~~~l~ 88 (240)
T TIGR02355 19 QEALKASRVLIVGLG-GLGCAASQYLAAAGVG-NLTLLDFDTVSLSNLQ-------RQVLHSDANIG-QPKVESAKDALT 88 (240)
T ss_pred HHHHhCCcEEEECcC-HHHHHHHHHHHHcCCC-EEEEEeCCcccccCcc-------cceeeeHhhCC-CcHHHHHHHHHH
Confidence 347888999999876 8999999999999998 8999988754433321 12222334443 234455555555
Q ss_pred HHcCCccEEE
Q 026924 103 EKYGSLNLLI 112 (231)
Q Consensus 103 ~~~g~id~lv 112 (231)
+..+.+++-.
T Consensus 89 ~inp~v~i~~ 98 (240)
T TIGR02355 89 QINPHIAINP 98 (240)
T ss_pred HHCCCcEEEE
Confidence 5555555443
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.04 Score=42.35 Aligned_cols=76 Identities=20% Similarity=0.206 Sum_probs=49.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC---ceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|-.|++.|. ++..+++.+.+ |+.++.+++..+...+.....+. .+.++.+|+.+. ..+
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~--v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~ 88 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKK--VVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG 88 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcce--EEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc
Confidence 57789999987665 45555555775 99999987766654433332222 277888887442 111
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
...|.++.|....
T Consensus 89 --~~~d~vi~n~p~~ 101 (188)
T PRK14968 89 --DKFDVILFNPPYL 101 (188)
T ss_pred --cCceEEEECCCcC
Confidence 2689999998765
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.016 Score=46.92 Aligned_cols=77 Identities=25% Similarity=0.246 Sum_probs=49.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++++||+|+++ +|++++..+...|.+ |+.++++++..+.+.+ .+.. ...|..+.+....+. ....+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~--v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~---~~~~~ 200 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGAR--VIVTDRSDEKLELAKE----LGAD---HVIDYKEEDLEEELR---LTGGG 200 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCe--EEEEcCCHHHHHHHHH----hCCc---eeccCCcCCHHHHHH---HhcCC
Confidence 578999999998 999999988889986 8888877644333322 1211 112443333333333 22235
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++++++
T Consensus 201 ~~d~vi~~~~ 210 (271)
T cd05188 201 GADVVIDAVG 210 (271)
T ss_pred CCCEEEECCC
Confidence 7999999887
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.028 Score=41.65 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=50.6
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh----cCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++.|+|++|.+|.+++..|+..+.-..+++.|+++...+....+++ .......... .+++ .+
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~-----------~~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE-----------AL 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG-----------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc-----------cc
Confidence 5889999999999999999998864469999998766555322221 1112222222 2222 22
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
..-|++|..+|..
T Consensus 68 ~~aDivvitag~~ 80 (141)
T PF00056_consen 68 KDADIVVITAGVP 80 (141)
T ss_dssp TTESEEEETTSTS
T ss_pred ccccEEEEecccc
Confidence 4789999999964
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.012 Score=42.85 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=52.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh--------cCCCceeEEEecCCChHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--------RFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~--------~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
..++-|+|+ |..|.++++.|.+.|+. .+-+.+|+.+..+.+..... +.-.+...+-+-+.|. .+..+++
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~-v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~ 86 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHE-VVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAE 86 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSE-EEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHH
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCe-EEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHH
Confidence 456889998 68999999999999997 33445676655444332221 1112344444555555 7888888
Q ss_pred HHHHH--cCCccEEEEccccC
Q 026924 100 SIKEK--YGSLNLLINASGIL 118 (231)
Q Consensus 100 ~~~~~--~g~id~lv~~ag~~ 118 (231)
++... ..+=.+|||+.|..
T Consensus 87 ~La~~~~~~~g~iVvHtSGa~ 107 (127)
T PF10727_consen 87 QLAQYGAWRPGQIVVHTSGAL 107 (127)
T ss_dssp HHHCC--S-TT-EEEES-SS-
T ss_pred HHHHhccCCCCcEEEECCCCC
Confidence 88765 34457999999965
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.013 Score=52.72 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=39.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~ 73 (231)
++.+++++|.|+ |.+|..+++.|...|+. .|++++|+.+..+.+.+.
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~-~V~V~nRs~era~~La~~ 309 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCT-KMVVVNRSEERVAALREE 309 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHH
Confidence 377899999999 89999999999999986 688999988776665443
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.1 Score=44.14 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC---CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++.|+|+ |.+|.+++..|+..|.-..+++.|++++.++....++... ..++.... .+. +
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~-----------~ 69 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY-----------S 69 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH-----------H
Confidence 4678999998 9999999999999887335999999888776643332221 11222221 111 1
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
.+..-|++|..+|..
T Consensus 70 ~~~~adivIitag~~ 84 (315)
T PRK00066 70 DCKDADLVVITAGAP 84 (315)
T ss_pred HhCCCCEEEEecCCC
Confidence 224679999999964
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.01 Score=52.16 Aligned_cols=45 Identities=31% Similarity=0.308 Sum_probs=37.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
++++++++|.|+ |.+|+.+++.|...|+. .|++++|+.+..+.+.
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~-~V~v~~r~~~ra~~la 223 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVR-KITVANRTLERAEELA 223 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCC-eEEEEeCCHHHHHHHH
Confidence 367899999987 89999999999999985 5888899876655443
|
|
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.054 Score=44.65 Aligned_cols=86 Identities=19% Similarity=0.207 Sum_probs=55.9
Q ss_pred CeEEEEecCCCchhHHH--HHHHHhcCCccEEEEee--cCCCC-----ccc-----hhhhhhcCCCceeEEEecCCChHH
Q 026924 28 GGVSLVQGASRGIGLEF--AKQLLEKNDKGCVIATC--RNPNG-----ATG-----LLDLKNRFPERLDVLQLDLTVEST 93 (231)
Q Consensus 28 ~k~~LVtGas~gIG~ai--a~~l~~~G~~~~vi~~~--r~~~~-----~~~-----~~~~~~~~~~~v~~~~~Dls~~~~ 93 (231)
.|.+||.|+|+|-|++. +..|. .|+. -+.+. |.... .-. ..+..++.|--..-+..|.-+.+-
T Consensus 41 PKkVLviGaSsGyGLa~RIsaaFG-~gAd--TiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~ 117 (398)
T COG3007 41 PKKVLVIGASSGYGLAARISAAFG-PGAD--TIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEM 117 (398)
T ss_pred CceEEEEecCCcccHHHHHHHHhC-CCCc--eeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHH
Confidence 48899999999888764 33444 5665 33332 21111 111 112223334445556678888888
Q ss_pred HHHHHHHHHHHcCCccEEEEccc
Q 026924 94 IEASAKSIKEKYGSLNLLINASG 116 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag 116 (231)
-++.++.++..+|.+|.+|+.-+
T Consensus 118 k~kvIe~Ik~~~g~vDlvvYSlA 140 (398)
T COG3007 118 KQKVIEAIKQDFGKVDLVVYSLA 140 (398)
T ss_pred HHHHHHHHHHhhccccEEEEecc
Confidence 88999999999999999999765
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.017 Score=47.88 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=58.8
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..+.++++.+++|.|++ |+|..++..|+..|.. .+.++|.+.-....+ +.++.+..-|+- ...++.+.++
T Consensus 20 e~Q~kL~~s~VlIvG~G-GLGs~va~~LA~aGVG-~i~lvD~D~Ve~SNL-------nRQ~l~~~~diG-~~Kve~a~~~ 89 (287)
T PRK08223 20 TEQQRLRNSRVAIAGLG-GVGGIHLLTLARLGIG-KFTIADFDVFELRNF-------NRQAGAMMSTLG-RPKAEVLAEM 89 (287)
T ss_pred HHHHHHhcCCEEEECCC-HHHHHHHHHHHHhCCC-eEEEEeCCCcchhcc-------ccccCcChhHCC-CcHHHHHHHH
Confidence 34457889999999886 8999999999999998 899998875443332 122333333442 3356666666
Q ss_pred HHHHcCCccEEEEcccc
Q 026924 101 IKEKYGSLNLLINASGI 117 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~ 117 (231)
+.+..+.+++-.++..+
T Consensus 90 l~~iNP~v~V~~~~~~l 106 (287)
T PRK08223 90 VRDINPELEIRAFPEGI 106 (287)
T ss_pred HHHHCCCCEEEEEeccc
Confidence 66666667766665543
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.024 Score=49.38 Aligned_cols=48 Identities=31% Similarity=0.243 Sum_probs=41.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK 74 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~ 74 (231)
+++++++||.|++ -+|.-+|++|+++|.. .|+++.|+.++++.+.+..
T Consensus 175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~-~i~IaNRT~erA~~La~~~ 222 (414)
T COG0373 175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVK-KITIANRTLERAEELAKKL 222 (414)
T ss_pred ccccCeEEEEccc-HHHHHHHHHHHhCCCC-EEEEEcCCHHHHHHHHHHh
Confidence 4789999999986 7999999999999987 7999999988877765543
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.042 Score=41.52 Aligned_cols=86 Identities=13% Similarity=0.093 Sum_probs=52.0
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh---------hhcCCCceeEEEecCCChH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---------KNRFPERLDVLQLDLTVES 92 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~---------~~~~~~~v~~~~~Dls~~~ 92 (231)
..++++||.+||.||+ .+|...++.|++.|++ |.+++. +..+++.++ ..+..-.-..+..-.++.+
T Consensus 7 ~~l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~--V~VIsp--~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~ 81 (157)
T PRK06719 7 LMFNLHNKVVVIIGGG-KIAYRKASGLKDTGAF--VTVVSP--EICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQH 81 (157)
T ss_pred eEEEcCCCEEEEECCC-HHHHHHHHHHHhCCCE--EEEEcC--ccCHHHHhccCcEEEecccChhcCCCceEEEECCCCH
Confidence 3458899999999986 6999999999999998 544432 222222111 0110111112223356777
Q ss_pred HHHHHHHHHHHHcCCccEEEEccc
Q 026924 93 TIEASAKSIKEKYGSLNLLINASG 116 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag 116 (231)
++...+....+.. .+||++.
T Consensus 82 e~N~~i~~~a~~~----~~vn~~d 101 (157)
T PRK06719 82 AVNMMVKQAAHDF----QWVNVVS 101 (157)
T ss_pred HHHHHHHHHHHHC----CcEEECC
Confidence 7887777776552 3666664
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.069 Score=38.60 Aligned_cols=80 Identities=24% Similarity=0.307 Sum_probs=54.0
Q ss_pred EEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCC-c------------------cchhhhhhcCCCceeEEEecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG-A------------------TGLLDLKNRFPERLDVLQLDLT 89 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~-~------------------~~~~~~~~~~~~~v~~~~~Dls 89 (231)
.++|.|++|.+|+.+++.+.+ .|.+ .+-.++++.+. . +++.+.... .. +-.|+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~-lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~D-VvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFE-LVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----AD-VVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEE-EEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----S-EEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcE-EEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----CC-EEEEcC
Confidence 589999999999999999998 7776 45556666511 1 112222222 11 557999
Q ss_pred ChHHHHHHHHHHHHHcCCccEEEEcccc
Q 026924 90 VESTIEASAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 90 ~~~~v~~~~~~~~~~~g~id~lv~~ag~ 117 (231)
.++.+...++...+. ++.+|+-..|.
T Consensus 76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 76 NPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 999999988888776 78888877774
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.048 Score=43.02 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=31.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
++++||.+||.|| |.+|...++.|.+.|++ |.+++++
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~--V~VIs~~ 42 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAH--IVVISPE 42 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEcCC
Confidence 5789999999999 68999999999999997 6666554
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.024 Score=47.56 Aligned_cols=78 Identities=19% Similarity=0.194 Sum_probs=48.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+||+|++|.+++..+...|++ |+.+++++++.+.+.+ .+.+- ..|-.+++..++ +.+.. . +
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~--vi~~~~s~~~~~~l~~----~Ga~~---vi~~~~~~~~~~-v~~~~-~-~ 210 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCK--VIGCAGSDDKVAWLKE----LGFDA---VFNYKTVSLEEA-LKEAA-P-D 210 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCCE---EEeCCCccHHHH-HHHHC-C-C
Confidence 5789999999999999988888889996 7877776655443332 23211 123333222222 22221 1 3
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 211 gvd~vld~~g 220 (329)
T cd08294 211 GIDCYFDNVG 220 (329)
T ss_pred CcEEEEECCC
Confidence 5888888766
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.019 Score=50.49 Aligned_cols=44 Identities=32% Similarity=0.354 Sum_probs=36.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
++++++++|.|+ |.+|+.+++.|.+.|.. .|++++|+.+..+.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~-~V~v~~rs~~ra~~l 220 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVG-KILIANRTYERAEDL 220 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHH
Confidence 367899999997 89999999999999955 588899987655443
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.033 Score=44.73 Aligned_cols=39 Identities=26% Similarity=0.152 Sum_probs=33.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++++++|.|+ ||+|..+++.|+..|.. .+.++|.+.
T Consensus 17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg-~i~lvD~D~ 55 (228)
T cd00757 17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVG-KLGLVDDDV 55 (228)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence 4678899999995 48999999999999998 788887653
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.036 Score=37.24 Aligned_cols=36 Identities=33% Similarity=0.405 Sum_probs=30.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r 62 (231)
++++|+++|.|. |+.|+.++..|.+.|.. .|.+.+|
T Consensus 20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~-~v~v~~r 55 (86)
T cd05191 20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGK-KVVLCDR 55 (86)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcC
Confidence 568899999999 89999999999998654 5777766
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.079 Score=44.91 Aligned_cols=151 Identities=10% Similarity=0.017 Sum_probs=86.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCcc-----EEEEeecCCCC--ccch-hhhhhcC---CCceeEEEecCCChHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNG--ATGL-LDLKNRF---PERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~-----~vi~~~r~~~~--~~~~-~~~~~~~---~~~v~~~~~Dls~~~~v~~~ 97 (231)
+++.|+|++|.+|.+++..|+..|.-. .+++.|.++.. ++.. .++.... ..++. ++.
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~------- 70 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD------- 70 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-------
Confidence 479999999999999999999888743 48888885433 3332 2221111 01111 111
Q ss_pred HHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
.-.+.+-.-|++|..||... .+ ..+.. +.++.|+. +.+.+.+.+.+... +.+.++++
T Consensus 71 --~~~~~~~daDivvitaG~~~--------k~--g~tR~---dll~~N~~----i~~~i~~~i~~~~~----~~~iiivv 127 (322)
T cd01338 71 --DPNVAFKDADWALLVGAKPR--------GP--GMERA---DLLKANGK----IFTAQGKALNDVAS----RDVKVLVV 127 (322)
T ss_pred --CcHHHhCCCCEEEEeCCCCC--------CC--CCcHH---HHHHHHHH----HHHHHHHHHHhhCC----CCeEEEEe
Confidence 01223347899999999642 21 12222 23555554 44555555554431 01366666
Q ss_pred ccCcccc-----CCC-CCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 178 SARVGSI-----GDN-RLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 178 ss~~~~~-----~~~-~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
|-..-.. ... ..|....|+.++.--..|...++..+.
T Consensus 128 sNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 128 GNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred cCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence 6432111 111 145555788888888888888888764
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.022 Score=47.28 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=33.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r 62 (231)
.+++||.++|.|+++-.|+.++..|.++|+. |.++.|
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gat--Vtv~~~ 191 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANAT--VTICHS 191 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCE--EEEEeC
Confidence 3678999999999988999999999999995 777776
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.043 Score=40.20 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=30.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
+++++|.|++ ++|..+++.|+..|.. .+.++|.+.-.
T Consensus 2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~-~i~lvD~d~v~ 38 (135)
T PF00899_consen 2 NKRVLIIGAG-GVGSEVAKNLARSGVG-KITLVDDDIVE 38 (135)
T ss_dssp T-EEEEESTS-HHHHHHHHHHHHHTTS-EEEEEESSBB-
T ss_pred CCEEEEECcC-HHHHHHHHHHHHhCCC-ceeecCCccee
Confidence 5678888876 7999999999999997 79998876433
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.045 Score=47.07 Aligned_cols=40 Identities=15% Similarity=0.033 Sum_probs=35.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||+|..+++.|+..|.. .+.++|.+.
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~ 62 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT 62 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 45778899999998 58999999999999998 899998864
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.18 Score=42.54 Aligned_cols=35 Identities=20% Similarity=0.099 Sum_probs=30.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++.|+|++|.+|..++..|+..|....|+++++++
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 68999999999999999999988643588999954
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.03 Score=54.32 Aligned_cols=79 Identities=18% Similarity=0.140 Sum_probs=56.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCc------------cEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDK------------GCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~------------~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v 94 (231)
+.|.++|.|+ |.+|+..++.|++.... ..|.+++++.+.++.+.+.. .++..+++|++|.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL 642 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence 4678999997 79999999999985431 12667777765555443321 2567889999999877
Q ss_pred HHHHHHHHHHcCCccEEEEcccc
Q 026924 95 EASAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 95 ~~~~~~~~~~~g~id~lv~~ag~ 117 (231)
.++++ .+|+||++...
T Consensus 643 ~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 643 LKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred HHhhc-------CCCEEEECCCc
Confidence 66554 47999998874
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.011 Score=52.88 Aligned_cols=44 Identities=18% Similarity=0.187 Sum_probs=36.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
++++|+++|+|+ ||+|++++..|++.|++ |.+.+|+.++.+.+.
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~--V~i~~R~~~~~~~la 372 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAE--LLIFNRTKAHAEALA 372 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH
Confidence 467899999996 69999999999999996 888888766555443
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.036 Score=50.73 Aligned_cols=96 Identities=13% Similarity=0.061 Sum_probs=62.8
Q ss_pred cccccccccccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC-
Q 026924 11 IRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT- 89 (231)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls- 89 (231)
+++|...+.... .++++.++||.|++ |||..+++.|++.|.. ++.++|.+.-....+. .++.+..-|+.
T Consensus 322 LmkWRllP~l~~-ekL~~~kVLIvGaG-GLGs~VA~~La~~GVg-~ItlVD~D~Ve~SNL~-------RQ~Lf~~~Dv~~ 391 (664)
T TIGR01381 322 LMKWRLHPDLQL-ERYSQLKVLLLGAG-TLGCNVARCLIGWGVR-HITFVDNGKVSYSNPV-------RQSLSNFEDCLL 391 (664)
T ss_pred HHhhhcCChhhH-HHHhcCeEEEECCc-HHHHHHHHHHHHcCCC-eEEEEcCCEECCCccc-------cccccchhhhhh
Confidence 345554444332 46788999999986 7999999999999998 8999988653333221 12233333442
Q ss_pred -ChHHHHHHHHHHHHHcCCccEEEEccc
Q 026924 90 -VESTIEASAKSIKEKYGSLNLLINASG 116 (231)
Q Consensus 90 -~~~~v~~~~~~~~~~~g~id~lv~~ag 116 (231)
....++.+.+.+++.++.+++--++.-
T Consensus 392 ~Gk~KA~aAa~~Lk~InP~v~i~~~~~~ 419 (664)
T TIGR01381 392 GGRGKAETAQKALKRIFPSIQATGHRLT 419 (664)
T ss_pred cCCcHHHHHHHHHHHHCCCcEEEEeeee
Confidence 244666777777777777766554443
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.017 Score=46.36 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=32.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCc-cEEEEeecC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRN 63 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~-~~vi~~~r~ 63 (231)
++++++++|.|+ |+.|++++..|++.|.+ -.+.+++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 578899999999 68999999999999972 128889998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.037 Score=45.92 Aligned_cols=79 Identities=14% Similarity=0.263 Sum_probs=49.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++++++|+|+++++|.+++..+...|++ |+++.++++..+.+ ...+.+. ..+....+....+.+.. . ..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~~~~-~-~~ 207 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGAR--VFTTAGSDEKCAAC----EALGADI---AINYREEDFVEVVKAET-G-GK 207 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHcCCcE---EEecCchhHHHHHHHHc-C-CC
Confidence 4789999999999999999999999997 77777765543322 1222211 12333333222222221 1 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|.+++++|
T Consensus 208 ~~d~~i~~~~ 217 (325)
T TIGR02824 208 GVDVILDIVG 217 (325)
T ss_pred CeEEEEECCc
Confidence 5999999876
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.18 Score=42.60 Aligned_cols=35 Identities=20% Similarity=0.036 Sum_probs=29.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++.|+|++|.+|.++|..|+..|.-..+++.|.++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 37899999999999999999887633589999877
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.047 Score=47.23 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=50.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-HHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~~~ 105 (231)
+|+++||.|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .+.+. ..|..+. +++.+.+.++..
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~-~Vi~~~~~~~r~~~a~~----~Ga~~---~i~~~~~~~~~~~~v~~~~~-- 266 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGAS-KIIGVDINPEKFEKGKE----MGITD---FINPKDSDKPVHERIREMTG-- 266 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCC-cEEEEcCChHHHHHHHH----cCCcE---EEecccccchHHHHHHHHhC--
Confidence 4789999986 89999999888889984 48888887766554432 23221 1243332 123333333322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|+++.++|.
T Consensus 267 ~g~dvvid~~G~ 278 (381)
T PLN02740 267 GGVDYSFECAGN 278 (381)
T ss_pred CCCCEEEECCCC
Confidence 268999998884
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.049 Score=46.87 Aligned_cols=80 Identities=19% Similarity=0.197 Sum_probs=50.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
.|.++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .+.+. ..|..+ .+++.+.+.++..
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~-~Vi~~~~~~~~~~~a~~----~Ga~~---~i~~~~~~~~~~~~v~~~~~-- 253 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKAS-RIIAIDINPAKFELAKK----LGATD---CVNPNDYDKPIQEVIVEITD-- 253 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCCe---EEcccccchhHHHHHHHHhC--
Confidence 4789999985 89999998888888984 48888887665444322 23221 223332 2233333333322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 254 ~g~d~vid~~G~ 265 (368)
T TIGR02818 254 GGVDYSFECIGN 265 (368)
T ss_pred CCCCEEEECCCC
Confidence 368999999873
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.09 Score=41.31 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=34.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.++++.+++|.|++| +|.++++.|+..|.+ .+.++|.+.-
T Consensus 15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg-~i~lvD~d~v 54 (198)
T cd01485 15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGID-SITIVDHRLV 54 (198)
T ss_pred HHHhhCcEEEECCCH-HHHHHHHHHHHcCCC-EEEEEECCcC
Confidence 467788999998875 999999999999998 8999888653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.081 Score=42.06 Aligned_cols=40 Identities=20% Similarity=0.099 Sum_probs=34.9
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||+|..+++.|++.|.. .+.+.|.+.
T Consensus 23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~ 62 (212)
T PRK08644 23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFDV 62 (212)
T ss_pred HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 34778899999996 68999999999999998 899998874
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.055 Score=46.53 Aligned_cols=79 Identities=15% Similarity=0.189 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-HHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~~~ 105 (231)
+|.++||.|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .+.+. ..|..+. +++.+.+.++..
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~-~vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~~~~v~~~~~-- 254 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGAS-RIIGIDINPDKFELAKK----FGATD---CVNPKDHDKPIQQVLVEMTD-- 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH----cCCCE---EEcccccchHHHHHHHHHhC--
Confidence 4789999975 89999999988889994 48888887766554322 23221 1344332 234444444432
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
+.+|+++.+.|
T Consensus 255 ~g~d~vid~~g 265 (368)
T cd08300 255 GGVDYTFECIG 265 (368)
T ss_pred CCCcEEEECCC
Confidence 36899999887
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.078 Score=41.65 Aligned_cols=39 Identities=21% Similarity=0.257 Sum_probs=33.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++++++|.|++ |+|..+++.|+..|.. .+.++|.+.
T Consensus 17 ~~L~~s~VlIiG~g-glG~evak~La~~GVg-~i~lvD~d~ 55 (197)
T cd01492 17 KRLRSARILLIGLK-GLGAEIAKNLVLSGIG-SLTILDDRT 55 (197)
T ss_pred HHHHhCcEEEEcCC-HHHHHHHHHHHHcCCC-EEEEEECCc
Confidence 46788999999865 5999999999999998 898888764
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.066 Score=44.46 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=33.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
.+++||.++|+|.|.-+|+.++..|.+.|+. |.++.+.
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat--Vtv~~s~ 191 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS--VTILHSR 191 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCC
Confidence 3689999999999999999999999999996 7766653
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.058 Score=45.24 Aligned_cols=79 Identities=11% Similarity=0.158 Sum_probs=49.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.++||.|+++++|.+++..+.+.|++ |+.++++....+.+.+. .+.. ...|..+.+..+++. +.. . +
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~--vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~v~-~~~-~-~ 213 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGAR--VVGIAGSDEKCRWLVEE---LGFD---AAINYKTPDLAEALK-EAA-P-D 213 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHhh---cCCc---eEEecCChhHHHHHH-Hhc-c-C
Confidence 4789999999999999999999999996 77777766543333221 2221 112333332222222 222 1 4
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.++|
T Consensus 214 ~~d~vi~~~g 223 (329)
T cd05288 214 GIDVYFDNVG 223 (329)
T ss_pred CceEEEEcch
Confidence 6899998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.05 Score=45.19 Aligned_cols=40 Identities=28% Similarity=0.326 Sum_probs=33.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
++++++|+|+++++|++++..+...|++ ++.++++++..+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~--v~~~~~~~~~~~ 183 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGAT--VIATTRTSEKRD 183 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEcCCHHHHH
Confidence 5789999999999999999999999997 777777664443
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.061 Score=45.49 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=48.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|.++||+|+ |++|..++..+...|++ .|+++++++++.+.+.+ .+.. ...|..+.+ .+++.+ +.. ..
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~-~vi~~~~~~~~~~~~~~----~ga~---~~i~~~~~~-~~~~~~-~~~-~~ 230 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAE-DVIGVDPSPERLELAKA----LGAD---FVINSGQDD-VQEIRE-LTS-GA 230 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHH----hCCC---EEEcCCcch-HHHHHH-HhC-CC
Confidence 4789999986 89999999988889997 57777777655443322 2321 123443333 332222 111 12
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.+.|.
T Consensus 231 ~~d~vid~~g~ 241 (339)
T cd08239 231 GADVAIECSGN 241 (339)
T ss_pred CCCEEEECCCC
Confidence 68999988773
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.05 Score=41.25 Aligned_cols=85 Identities=21% Similarity=0.204 Sum_probs=54.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-------cCCCceeEEEecCCChHHHHHHHHH-
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-------RFPERLDVLQLDLTVESTIEASAKS- 100 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dls~~~~v~~~~~~- 100 (231)
+++-+.|- |.+|..++++|+++|++ |.+.+|++++.+.+.+.-. ..-.+...+-.=+.+.+++++++..
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~--v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~ 78 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYE--VTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGE 78 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTE--EEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCT
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCe--EEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhh
Confidence 35777777 68999999999999997 8888998766655432210 0011335556667888888888887
Q ss_pred -HHHHcCCccEEEEccc
Q 026924 101 -IKEKYGSLNLLINASG 116 (231)
Q Consensus 101 -~~~~~g~id~lv~~ag 116 (231)
+.....+=.++|.+.-
T Consensus 79 ~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 79 NILAGLRPGKIIIDMST 95 (163)
T ss_dssp THGGGS-TTEEEEE-SS
T ss_pred HHhhccccceEEEecCC
Confidence 6655545566665554
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.038 Score=48.88 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=30.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
.++|.|+ |.+|+++++.|.+.|.. |++++++++..+.
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~--v~vid~~~~~~~~ 38 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENND--VTVIDTDEERLRR 38 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCc--EEEEECCHHHHHH
Confidence 5888887 89999999999999997 7888887765444
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.075 Score=43.61 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=48.8
Q ss_pred EEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+.|+|++|.+|..++..|+..| .-..|++.|.+++.++.....++..-... ....++..++. ++.+..-
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~-------~~~~~~a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDP-------YEAFKDA 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCch-------HHHhCCC
Confidence 4689998899999999999988 21249999998877776444333221111 01111111111 2223467
Q ss_pred cEEEEccccC
Q 026924 109 NLLINASGIL 118 (231)
Q Consensus 109 d~lv~~ag~~ 118 (231)
|++|..+|..
T Consensus 72 DiVv~t~~~~ 81 (263)
T cd00650 72 DVVIITAGVG 81 (263)
T ss_pred CEEEECCCCC
Confidence 9999999864
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.093 Score=40.33 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=28.3
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++|.|+ ||+|..+++.|++.|.. .+.+.|.+.
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~ 33 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVG-NLKLVDFDV 33 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 688886 68999999999999997 799998875
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.079 Score=45.84 Aligned_cols=80 Identities=19% Similarity=0.207 Sum_probs=49.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-HHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~~~ 105 (231)
+|.++||.|+ |++|..++..+...|++ .|+.+++++++.+.+. ..+.+. ..|..+. ++..+.+.++..
T Consensus 193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~-~vi~~~~~~~~~~~a~----~lGa~~---~i~~~~~~~~~~~~v~~~~~-- 261 (378)
T PLN02827 193 KGSSVVIFGL-GTVGLSVAQGAKLRGAS-QIIGVDINPEKAEKAK----TFGVTD---FINPNDLSEPIQQVIKRMTG-- 261 (378)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHH----HcCCcE---EEcccccchHHHHHHHHHhC--
Confidence 4889999985 89999999888888986 4677776665443332 223211 1233321 233333333322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|+++.++|.
T Consensus 262 ~g~d~vid~~G~ 273 (378)
T PLN02827 262 GGADYSFECVGD 273 (378)
T ss_pred CCCCEEEECCCC
Confidence 368999998884
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.037 Score=39.13 Aligned_cols=71 Identities=23% Similarity=0.273 Sum_probs=48.9
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
++|.|.+ .+|+.+++.|.+.+.+ |++++++++..+.+.+. .+.++.+|.++++.++++ .....+.
T Consensus 1 vvI~G~g-~~~~~i~~~L~~~~~~--vvvid~d~~~~~~~~~~------~~~~i~gd~~~~~~l~~a------~i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGYG-RIGREIAEQLKEGGID--VVVIDRDPERVEELREE------GVEVIYGDATDPEVLERA------GIEKADA 65 (116)
T ss_dssp EEEES-S-HHHHHHHHHHHHTTSE--EEEEESSHHHHHHHHHT------TSEEEES-TTSHHHHHHT------TGGCESE
T ss_pred eEEEcCC-HHHHHHHHHHHhCCCE--EEEEECCcHHHHHHHhc------ccccccccchhhhHHhhc------CccccCE
Confidence 5677775 7999999999997765 88888887665544322 267889999999876543 2236677
Q ss_pred EEEccc
Q 026924 111 LINASG 116 (231)
Q Consensus 111 lv~~ag 116 (231)
+|....
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 775443
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.052 Score=43.56 Aligned_cols=59 Identities=24% Similarity=0.276 Sum_probs=41.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIE 95 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~ 95 (231)
.++|.|++ ..|+.+|+.|.+.|++ |++++++++..+..... ......+.+|-++++.++
T Consensus 2 ~iiIiG~G-~vG~~va~~L~~~g~~--Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~ 60 (225)
T COG0569 2 KIIIIGAG-RVGRSVARELSEEGHN--VVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLE 60 (225)
T ss_pred EEEEECCc-HHHHHHHHHHHhCCCc--eEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHH
Confidence 56677665 7999999999999998 88889988765542211 124566677777765443
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.064 Score=42.41 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=31.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+++||.+||.||+ .+|..-++.|++.|++ |.+++.+.
T Consensus 5 l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~--VtVvsp~~ 42 (205)
T TIGR01470 5 ANLEGRAVLVVGGG-DVALRKARLLLKAGAQ--LRVIAEEL 42 (205)
T ss_pred EEcCCCeEEEECcC-HHHHHHHHHHHHCCCE--EEEEcCCC
Confidence 46889999999986 6999999999999997 66666543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.17 Score=44.32 Aligned_cols=42 Identities=29% Similarity=0.333 Sum_probs=35.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
.+.|++++|.|++ .||+.++..+...|++ |+++++++.+.+.
T Consensus 199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~--ViV~d~d~~R~~~ 240 (413)
T cd00401 199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGAR--VIVTEVDPICALQ 240 (413)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEECChhhHHH
Confidence 4679999999987 7999999999999997 7878887765443
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.18 Score=42.98 Aligned_cols=39 Identities=23% Similarity=0.125 Sum_probs=33.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
..+.|+++.|.|. |.||+++|+.|...|++ |+..++++.
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~--V~~~d~~~~ 180 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGAT--ITAYDAYPN 180 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCChh
Confidence 3678999999987 57999999999999997 888888754
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.11 Score=44.09 Aligned_cols=41 Identities=27% Similarity=0.127 Sum_probs=33.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+.+++.|+|+ |.+|..++..++..|.. .+++.|.+++.++.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~-~l~L~Di~~~~~~g 44 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLG-DVVLYDVIKGVPQG 44 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCC-eEEEEECCCccchh
Confidence 4568999997 88999999999998842 49999998776554
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.12 Score=44.01 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
..+.||++.|.|- |.||+.+|+.|...|++ |+..+|+..
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~--V~~~d~~~~ 184 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMR--ILYYSRTRK 184 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCCCC
Confidence 4678999999998 68999999999999997 888888653
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.083 Score=46.22 Aligned_cols=45 Identities=16% Similarity=0.173 Sum_probs=33.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCCCccchhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~~~~~~~~ 72 (231)
.|.+++|.|++|++|...+..+...| +. .|+.+++++++.+.+.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~-~Vi~~~~~~~r~~~a~~ 221 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPS-LLVVTDVNDERLARAQR 221 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCc-eEEEEcCCHHHHHHHHH
Confidence 46799999999999999877666654 33 48888887766554433
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.22 Score=43.32 Aligned_cols=38 Identities=21% Similarity=0.128 Sum_probs=33.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
..+.||++.|.|. |.||+.+++.|...|++ |+..+++.
T Consensus 195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~--V~~~d~~~ 232 (386)
T PLN03139 195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCN--LLYHDRLK 232 (386)
T ss_pred cCCCCCEEEEEee-cHHHHHHHHHHHHCCCE--EEEECCCC
Confidence 4689999999995 67999999999999997 77788764
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.039 Score=40.46 Aligned_cols=56 Identities=21% Similarity=0.113 Sum_probs=43.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES 92 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~ 92 (231)
+++.+++.|.+ -|.++|..|.+.|++ |+.+|.++...+...+ ..+.++..|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~--ViaIDi~~~aV~~a~~------~~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFD--VIVIDINEKAVEKAKK------LGLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCE--EEEEECCHHHHHHHHH------hCCeEEECcCCCCC
Confidence 45789999998 778899999999997 9999999876554332 24567788887654
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.083 Score=45.47 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=48.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||.|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .+.+ ...|..+++..++ +.++. .+
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~-~Vi~~~~~~~r~~~a~~----~Ga~---~~i~~~~~~~~~~-i~~~~--~~ 258 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGAS-QVVAVDLNEDKLALARE----LGAT---ATVNAGDPNAVEQ-VRELT--GG 258 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-cEEEEcCCHHHHHHHHH----cCCc---eEeCCCchhHHHH-HHHHh--CC
Confidence 4789999985 89999988888888995 47888777665443322 2321 1133333322222 22221 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|++|.+.|
T Consensus 259 g~d~vid~~G 268 (371)
T cd08281 259 GVDYAFEMAG 268 (371)
T ss_pred CCCEEEECCC
Confidence 6899998887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.14 Score=43.25 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=30.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+|+++||.|+++++|.+++..+...|++ ++.+.++.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~--v~~~~~~~ 181 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIK--TINVVRDR 181 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCe--EEEEEcCC
Confidence 5789999999999999999999999997 66666554
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.033 Score=44.42 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=33.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
++.|+||+|.+|.+++..|++.|++ |.+.+|+++..+.+
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~--V~v~~r~~~~~~~l 40 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNK--IIIGSRDLEKAEEA 40 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCE--EEEEEcCHHHHHHH
Confidence 5889999999999999999999986 77788987665553
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PTZ00245 ubiquitin activating enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.16 Score=41.35 Aligned_cols=80 Identities=9% Similarity=0.004 Sum_probs=54.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++..+||.|+ ||+|..+++.|+..|-. .+.+.|.+.-...++ +.++.+-. |+ .....+...+++.+
T Consensus 22 ~KL~~SrVLVVG~-GGLGsEVAKnLaLAGVG-sItIvDdD~Ve~SNL-------~RQfl~~~-dv-Gk~KAeaAa~~L~e 90 (287)
T PTZ00245 22 QQLMHTSVALHGV-AGAAAEAAKNLVLAGVR-AVAVADEGLVTDADV-------CTNYLMQG-EA-GGTRGARALGALQR 90 (287)
T ss_pred HHHhhCeEEEECC-CchHHHHHHHHHHcCCC-eEEEecCCccchhhh-------cccccccc-cc-CCcHHHHHHHHHHH
Confidence 4677889999997 57999999999999998 788888765444332 12222222 44 44556666777776
Q ss_pred HcCCccEEEEc
Q 026924 104 KYGSLNLLINA 114 (231)
Q Consensus 104 ~~g~id~lv~~ 114 (231)
..+.+.+-..+
T Consensus 91 LNP~V~V~~i~ 101 (287)
T PTZ00245 91 LNPHVSVYDAV 101 (287)
T ss_pred HCCCcEEEEcc
Confidence 66666665444
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.16 Score=43.07 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=29.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCcc-----EEEEeecCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP 64 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~-----~vi~~~r~~ 64 (231)
+++.|+|++|.+|..++..|+..|.-. .+++.|.++
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~ 45 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPP 45 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCC
Confidence 478999999999999999999877643 488888854
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.055 Score=43.44 Aligned_cols=76 Identities=12% Similarity=0.031 Sum_probs=53.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+.|+.+|=.|++|| -+++.||+.|++ |...|-+++..+.......+.+..+. .....++++.+..
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~--VtgiD~se~~I~~Ak~ha~e~gv~i~----------y~~~~~edl~~~~ 122 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGAS--VTGIDASEKPIEVAKLHALESGVNID----------YRQATVEDLASAG 122 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCe--eEEecCChHHHHHHHHhhhhcccccc----------chhhhHHHHHhcC
Confidence 78999999999998 689999999996 99999888777764433333232321 2233345555555
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
++.|+|+|.-=
T Consensus 123 ~~FDvV~cmEV 133 (243)
T COG2227 123 GQFDVVTCMEV 133 (243)
T ss_pred CCccEEEEhhH
Confidence 78899987664
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.097 Score=44.78 Aligned_cols=79 Identities=16% Similarity=0.167 Sum_probs=47.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||.|+ |++|...+..+...|++ +|+.+++++++.+.+.+ .+.+ ...|..+++..+.+ .+... ..
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~-~Vi~~~~~~~~~~~~~~----~Ga~---~~i~~~~~~~~~~i-~~~~~-~~ 244 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGAS-KIIAVDIDDRKLEWARE----FGAT---HTVNSSGTDPVEAI-RALTG-GF 244 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----cCCc---eEEcCCCcCHHHHH-HHHhC-CC
Confidence 4789999985 89999998888888986 58888887665444322 2321 11233333222222 22111 12
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 245 g~d~vid~~g 254 (358)
T TIGR03451 245 GADVVIDAVG 254 (358)
T ss_pred CCCEEEECCC
Confidence 5899998887
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.09 Score=45.46 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=34.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|++ |+|..++..|+..|.. .+.++|.+.
T Consensus 36 q~~l~~~~VliiG~G-glG~~v~~~La~~Gvg-~i~ivD~D~ 75 (370)
T PRK05600 36 QERLHNARVLVIGAG-GLGCPAMQSLASAGVG-TITLIDDDT 75 (370)
T ss_pred HHHhcCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEeCCE
Confidence 446788999999886 8999999999999987 799988863
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.036 Score=45.80 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=36.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
+++++|.|+ ||-+++++..|++.|+. .|.+++|+.++.+.+.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~-~i~i~nR~~~~a~~la~ 164 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFT-DGTIVARNEKTGKALAE 164 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHH
Confidence 468999996 78999999999999997 79999999877666544
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.097 Score=45.60 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=34.9
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++.+|+|.|++ |+|..+++.|+..|.. .+.++|.+.
T Consensus 33 q~~L~~~~VlivG~G-GlG~~va~~La~~Gvg-~l~lvD~D~ 72 (390)
T PRK07411 33 QKRLKAASVLCIGTG-GLGSPLLLYLAAAGIG-RIGIVDFDV 72 (390)
T ss_pred HHHHhcCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCCE
Confidence 347788999999886 7999999999999998 899988754
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.11 Score=45.22 Aligned_cols=39 Identities=21% Similarity=0.101 Sum_probs=34.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++.+|||.|++ |+|..+++.|+..|.. .+.++|.+.
T Consensus 38 ~~L~~~~VlviG~G-GlGs~va~~La~~Gvg-~i~lvD~D~ 76 (392)
T PRK07878 38 KRLKNARVLVIGAG-GLGSPTLLYLAAAGVG-TLGIVEFDV 76 (392)
T ss_pred HHHhcCCEEEECCC-HHHHHHHHHHHHcCCC-eEEEECCCE
Confidence 46778899999886 8999999999999998 899988764
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.27 Score=42.74 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=33.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
..+.||++.|.|. |.||+.+|+.|...|++ |+..+|+.
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~--V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVK--LHYTDRHR 225 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEECCCC
Confidence 4688999999998 46999999999999997 88888865
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.61 Score=39.34 Aligned_cols=34 Identities=21% Similarity=0.025 Sum_probs=29.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
++.|+|++|.+|.++|..|+..|.-..+++.|.+
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~ 35 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV 35 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC
Confidence 5889999999999999999988853359999987
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.13 Score=44.25 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=49.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-HHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~~~ 105 (231)
+|.++||.|+ |++|...+..+...|+. .|+.+++++++.+.+. ..+... ..|..+. +++.+.+.++..
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~-~vi~~~~~~~~~~~~~----~~Ga~~---~i~~~~~~~~~~~~v~~~~~-- 255 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGAS-RIIGVDLNPSKFEQAK----KFGVTE---FVNPKDHDKPVQEVIAEMTG-- 255 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHH----HcCCce---EEcccccchhHHHHHHHHhC--
Confidence 4789999985 89999988888888984 4888888766544332 223221 1233221 234444444332
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
+.+|+++.+.|
T Consensus 256 ~~~d~vid~~G 266 (369)
T cd08301 256 GGVDYSFECTG 266 (369)
T ss_pred CCCCEEEECCC
Confidence 36899998876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.094 Score=43.27 Aligned_cols=40 Identities=30% Similarity=0.319 Sum_probs=31.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
+|+++||.|+ |++|+..+..+...|++ .|+.+++++++.+
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~-~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAA-RVVAADPSPDRRE 159 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHH
Confidence 6789999986 79999998888888986 4777776655443
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.074 Score=39.37 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=34.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+++||.++|.|.+.-.|..++..|.++|+. |..++++.
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gat--V~~~~~~t 62 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGAT--VYSCDWKT 62 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEeCCCC
Confidence 4789999999999999999999999999996 87777644
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.1 Score=45.88 Aligned_cols=39 Identities=28% Similarity=0.302 Sum_probs=34.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.+.|++++|.|. |.||+.++..|...|++ |+++++++..
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~--ViV~d~dp~r 247 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGAR--VIVTEVDPIC 247 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEcCCchh
Confidence 468999999997 58999999999999996 8888887654
|
|
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.24 Score=41.15 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=51.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|+|++|.||+|..|.- +-+|++ .|++ |+...-+.++.+.+.... +-+. ..|-.++.++.+++++. +
T Consensus 153 ~geTv~VSaAsGAvGql-~GQ~Ak~~Gc~--VVGsaGS~EKv~ll~~~~---G~d~---afNYK~e~~~~~aL~r~---~ 220 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQL-VGQFAKLMGCY--VVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLSAALKRC---F 220 (343)
T ss_pred CCCEEEEeeccchhHHH-HHHHHHhcCCE--EEEecCChhhhhhhHhcc---CCcc---ceeccCccCHHHHHHHh---C
Confidence 57999999999999975 455554 7996 887776666655444332 2211 12444554555555553 3
Q ss_pred C-CccEEEEcccc
Q 026924 106 G-SLNLLINASGI 117 (231)
Q Consensus 106 g-~id~lv~~ag~ 117 (231)
+ .||+.+-|+|.
T Consensus 221 P~GIDiYfeNVGG 233 (343)
T KOG1196|consen 221 PEGIDIYFENVGG 233 (343)
T ss_pred CCcceEEEeccCc
Confidence 3 69999999994
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.093 Score=43.78 Aligned_cols=79 Identities=18% Similarity=0.285 Sum_probs=49.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.+.+++|+|+++++|.+++..+...|++ |+.++++.+..+.+. ..+.+ . ..|..+.+..+.+.+.. ...
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~--v~~~~~~~~~~~~~~----~~g~~--~-~~~~~~~~~~~~~~~~~--~~~ 210 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGAT--VVGAAGGPAKTALVR----ALGAD--V-AVDYTRPDWPDQVREAL--GGG 210 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCC--E-EEecCCccHHHHHHHHc--CCC
Confidence 4778999999999999999999999997 777777665444332 12321 1 12333433333322211 112
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++++.|
T Consensus 211 ~~d~vl~~~g 220 (324)
T cd08244 211 GVTVVLDGVG 220 (324)
T ss_pred CceEEEECCC
Confidence 5899999876
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.16 Score=43.38 Aligned_cols=76 Identities=22% Similarity=0.273 Sum_probs=46.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|...+..+...|++ |++++++....+.+ +..++.+... .|..++ ++.+ . +..+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~--vi~~~~~~~~~~~~-~~~~~~Ga~~----v~~~~~-~~~~----~-~~~~ 237 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFE--VYVLNRRDPPDPKA-DIVEELGATY----VNSSKT-PVAE----V-KLVG 237 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCe--EEEEecCCCCHHHH-HHHHHcCCEE----ecCCcc-chhh----h-hhcC
Confidence 5789999986 89999999877788996 88888854222221 1222334331 233332 2222 1 1225
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|++|.++|
T Consensus 238 ~~d~vid~~g 247 (355)
T cd08230 238 EFDLIIEATG 247 (355)
T ss_pred CCCEEEECcC
Confidence 6899999887
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.48 Score=33.88 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=41.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCC--ceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.|.|++|-+|..+.+.|.++= ++ .+.+.+++...-+.+......... ++.+.. .+.+. +.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~-----------~~ 65 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFE-LVALVSSSRSAGKPLSEVFPHPKGFEDLSVED---ADPEE-----------LS 65 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEE-EEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE---TSGHH-----------HT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCcc-EEEeeeeccccCCeeehhccccccccceeEee---cchhH-----------hh
Confidence 47899999999999999999853 34 344455555343444433321111 222222 22221 25
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
..|++|.+.+
T Consensus 66 ~~Dvvf~a~~ 75 (121)
T PF01118_consen 66 DVDVVFLALP 75 (121)
T ss_dssp TESEEEE-SC
T ss_pred cCCEEEecCc
Confidence 8999998876
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.081 Score=46.79 Aligned_cols=62 Identities=24% Similarity=0.160 Sum_probs=44.1
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v 94 (231)
...+.++|.|+ |.+|+.+++.|.+.|.. |++++++++..+.+.+. +..+..+..|.++.+.+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~--v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L 290 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYS--VKLIERDPERAEELAEE----LPNTLVLHGDGTDQELL 290 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHH
Confidence 34678999999 79999999999999997 88888887654443322 22345566666665443
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.069 Score=44.62 Aligned_cols=79 Identities=14% Similarity=0.152 Sum_probs=48.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||.|+++++|.+++..+...|++ ++.+.++.+..+.+.+ .+.+. + .|..+.+ ..+.+.+... ..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~--v~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~-~~~~i~~~~~-~~ 207 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGIN--VINLVRRDAGVAELRA----LGIGP-V--VSTEQPG-WQDKVREAAG-GA 207 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCe--EEEEecCHHHHHHHHh----cCCCE-E--EcCCCch-HHHHHHHHhC-CC
Confidence 4789999999999999999999999997 7777666554443332 12211 1 1222222 2222222211 12
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|+++.+.|
T Consensus 208 ~~d~v~d~~g 217 (324)
T cd08292 208 PISVALDSVG 217 (324)
T ss_pred CCcEEEECCC
Confidence 5899998877
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.097 Score=43.30 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=33.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
++++++|+|+++++|.+++..+...|++ |+.++++.+..+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~ 178 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGAR--VIAAASSEEKLA 178 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCE--EEEEeCCHHHHH
Confidence 5789999999999999999999999997 777777665433
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.38 Score=40.59 Aligned_cols=39 Identities=15% Similarity=0.038 Sum_probs=32.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
..+.||++.|.|-+ .||+.+|+.|...|++ |+..+++..
T Consensus 132 ~~l~g~tvgIvG~G-~IG~~vA~~l~afG~~--V~~~~~~~~ 170 (312)
T PRK15469 132 YHREDFTIGILGAG-VLGSKVAQSLQTWGFP--LRCWSRSRK 170 (312)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCC
Confidence 35789999999865 7999999999999997 878787654
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.14 Score=43.63 Aligned_cols=40 Identities=25% Similarity=0.317 Sum_probs=33.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+|.+++|.|+ |++|...+..+...|++ |+++++++++.+.
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~--vi~~~~~~~~~~~ 205 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAA--VVAIDIDPEKLEM 205 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCe--EEEEcCCHHHHHH
Confidence 4789999999 99999998888889996 7888887655443
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.14 Score=42.85 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=48.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.+++|.|+++.+|.+++......|++ |+.+.++.+..+.+.+ .+.+. . .|..+. +..+.+..... +
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~--v~~~~~~~~~~~~~~~----~g~~~-v--~~~~~~-~~~~~~~~~~~--~ 206 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCH--VIGTCSSDEKAEFLKS----LGCDR-P--INYKTE-DLGEVLKKEYP--K 206 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCe--EEEEeCcHHHHHHHHH----cCCce-E--EeCCCc-cHHHHHHHhcC--C
Confidence 5789999999999999998888889997 7777776654433322 23211 1 222222 22222222221 3
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|.++++.|
T Consensus 207 ~vd~v~~~~g 216 (329)
T cd08250 207 GVDVVYESVG 216 (329)
T ss_pred CCeEEEECCc
Confidence 5899998876
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.077 Score=40.88 Aligned_cols=43 Identities=23% Similarity=0.270 Sum_probs=34.8
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA 67 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~ 67 (231)
....+.||++.|.|. |.||+++|+.|..-|++ |+..+|+....
T Consensus 30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~--V~~~d~~~~~~ 72 (178)
T PF02826_consen 30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMR--VIGYDRSPKPE 72 (178)
T ss_dssp TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-E--EEEEESSCHHH
T ss_pred CccccCCCEEEEEEE-cCCcCeEeeeeecCCce--eEEecccCChh
Confidence 334778999999987 68999999999999997 99999987543
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.17 Score=42.77 Aligned_cols=37 Identities=16% Similarity=0.079 Sum_probs=32.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
..+.||++.|.|- |.||+++|+.+..-|++ |+..++.
T Consensus 144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~--V~~~~~~ 180 (317)
T PRK06487 144 VELEGKTLGLLGH-GELGGAVARLAEAFGMR--VLIGQLP 180 (317)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhCCCE--EEEECCC
Confidence 3688999999998 58999999999999997 8777775
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.11 Score=43.55 Aligned_cols=42 Identities=29% Similarity=0.351 Sum_probs=34.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
.++++||.|+++++|.+++..+.+.|++ |+.+++++++.+.+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~--v~~~~~~~~~~~~~ 187 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYE--VVASTGKADAADYL 187 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCe--EEEEecCHHHHHHH
Confidence 3679999999999999999988889997 88887776654443
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.4 Score=40.29 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=49.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC-ChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~v~~~~~~~~~~~ 105 (231)
.|+.+-|+|++| ||.--++.--+-|++ |++.+++..+.+++.+. .|.+.. +|.+ |++.++++.+...
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~r--V~vis~~~~kkeea~~~---LGAd~f---v~~~~d~d~~~~~~~~~d--- 248 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMR--VTVISTSSKKKEEAIKS---LGADVF---VDSTEDPDIMKAIMKTTD--- 248 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcE--EEEEeCCchhHHHHHHh---cCccee---EEecCCHHHHHHHHHhhc---
Confidence 689999999998 998777777778997 88888887655554332 233221 4566 6666666555441
Q ss_pred CCccEEEEc
Q 026924 106 GSLNLLINA 114 (231)
Q Consensus 106 g~id~lv~~ 114 (231)
+.+|.+.|.
T Consensus 249 g~~~~v~~~ 257 (360)
T KOG0023|consen 249 GGIDTVSNL 257 (360)
T ss_pred Ccceeeeec
Confidence 345555443
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.085 Score=39.96 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=31.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.+++||.++|.|.|.-+|+.++..|.++|+. |.+++.....
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~at--Vt~~h~~T~~ 72 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGAT--VTICHSKTKN 72 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-E--EEEE-TTSSS
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCe--EEeccCCCCc
Confidence 3679999999999999999999999999995 7777666533
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.25 Score=39.86 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=27.7
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+||.| .||||.++++.|+..|.. .+.++|.+.
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg-~i~ivD~D~ 33 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFG-QIHVIDMDT 33 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 67777 569999999999999998 899988864
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.18 Score=41.99 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=50.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++.++||.|++ |+|.++++.|+..|.+ .+.+.|.+.-...++ +.++.+-.-|+- ....+...+++++
T Consensus 15 ~kL~~s~VLIvG~g-GLG~EiaKnLalaGVg-~itI~D~d~ve~snL-------~rqf~~~~~dIG-k~Kaea~~~~L~e 84 (286)
T cd01491 15 KKLQKSNVLISGLG-GLGVEIAKNLILAGVK-SVTLHDTKPCSWSDL-------SSQFYLREEDIG-KNRAEASQARLAE 84 (286)
T ss_pred HHHhcCcEEEEcCC-HHHHHHHHHHHHcCCC-eEEEEcCCccchhhc-------ccCccCChHHhC-HHHHHHHHHHHHH
Confidence 36778899999886 7999999999999998 899988765433332 122222233442 2334455555555
Q ss_pred HcCCccEEE
Q 026924 104 KYGSLNLLI 112 (231)
Q Consensus 104 ~~g~id~lv 112 (231)
..+.+.+-+
T Consensus 85 LNp~V~V~~ 93 (286)
T cd01491 85 LNPYVPVTV 93 (286)
T ss_pred HCCCCEEEE
Confidence 444444433
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.18 Score=41.98 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=48.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||.|+++++|.+++..+...|++ +++..++.+..+.+. ..+.+ ...|..+.+..+++. +.. ...
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~--v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~-~~~-~~~ 206 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFK--TINVVRRDEQVEELK----ALGAD---EVIDSSPEDLAQRVK-EAT-GGA 206 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCe--EEEEecChHHHHHHH----hcCCC---EEecccchhHHHHHH-HHh-cCC
Confidence 5789999999999999999999999997 777777665433332 12221 112232322222222 221 113
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|.++.+.|
T Consensus 207 ~~d~vl~~~g 216 (323)
T cd05282 207 GARLALDAVG 216 (323)
T ss_pred CceEEEECCC
Confidence 5899998876
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.33 Score=41.08 Aligned_cols=75 Identities=23% Similarity=0.358 Sum_probs=46.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|+|+++++|.+++......|++ |+...++ ...+ .....+.+ ...|..+.+..+ .+.. .+
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~--v~~~~~~-~~~~----~~~~~g~~---~~~~~~~~~~~~----~l~~-~~ 226 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAH--VTTTCST-DAIP----LVKSLGAD---DVIDYNNEDFEE----ELTE-RG 226 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCc-chHH----HHHHhCCc---eEEECCChhHHH----HHHh-cC
Confidence 4889999999999999999998899997 6665553 2211 22222321 123333333222 2222 25
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|.++++.|
T Consensus 227 ~vd~vi~~~g 236 (350)
T cd08248 227 KFDVILDTVG 236 (350)
T ss_pred CCCEEEECCC
Confidence 6999998876
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.35 Score=41.95 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=49.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.|++||+|++ .+|+.++..+.+.|++ +++++.++...... . .+ ..+..|..|.+.+.+++++.
T Consensus 11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~--v~~~~~~~~~~~~~--~----ad--~~~~~~~~d~~~l~~~~~~~----- 74 (395)
T PRK09288 11 SATRVMLLGSG-ELGKEVAIEAQRLGVE--VIAVDRYANAPAMQ--V----AH--RSHVIDMLDGDALRAVIERE----- 74 (395)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCCCchHH--h----hh--heEECCCCCHHHHHHHHHHh-----
Confidence 55789999876 6999999999999997 77777765431111 0 11 13566777877776666542
Q ss_pred CccEEEEcc
Q 026924 107 SLNLLINAS 115 (231)
Q Consensus 107 ~id~lv~~a 115 (231)
.+|+++...
T Consensus 75 ~id~vi~~~ 83 (395)
T PRK09288 75 KPDYIVPEI 83 (395)
T ss_pred CCCEEEEee
Confidence 578887543
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.089 Score=43.98 Aligned_cols=40 Identities=23% Similarity=0.232 Sum_probs=35.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.+++||.+.|.|.++-+|+.++..|.++|+. |.++++...
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gat--Vtv~~~~t~ 194 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCS--VTVVHSRST 194 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCE--EEEECCCCC
Confidence 3678999999999999999999999999996 877776654
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.064 Score=42.81 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=31.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+++|++++|.| .|.+|+.+|+.|.+.|++ .|.+.|.+.
T Consensus 20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~-vV~vsD~~g 57 (217)
T cd05211 20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGK-VLAVSDPDG 57 (217)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHcCCE-EEEEEcCCC
Confidence 56899999999 578999999999999997 566667654
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.26 Score=41.39 Aligned_cols=85 Identities=19% Similarity=0.090 Sum_probs=57.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|.++||.||+ -||+..-..+-.-|++ .|++++-.+.+++..++ .|.++......-++.+++.+.++....+.
T Consensus 169 ~Gs~vLV~GAG-PIGl~t~l~Aka~GA~-~VVi~d~~~~Rle~Ak~----~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~- 241 (354)
T KOG0024|consen 169 KGSKVLVLGAG-PIGLLTGLVAKAMGAS-DVVITDLVANRLELAKK----FGATVTDPSSHKSSPQELAELVEKALGKK- 241 (354)
T ss_pred cCCeEEEECCc-HHHHHHHHHHHHcCCC-cEEEeecCHHHHHHHHH----hCCeEEeeccccccHHHHHHHHHhhcccc-
Confidence 47899999986 7999888888888998 79998888777665443 35544443333334444444444443221
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
.+|+.|.|.|..
T Consensus 242 ~~d~~~dCsG~~ 253 (354)
T KOG0024|consen 242 QPDVTFDCSGAE 253 (354)
T ss_pred CCCeEEEccCch
Confidence 489999999853
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.2 Score=41.92 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=32.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
+|.+++|.|+++++|++++..+...|++ ++.+.++++..+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~--v~~~~~~~~~~~ 179 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAA--TIITTSSEEKVD 179 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHH
Confidence 4689999999999999999999999997 566666654433
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.2 Score=42.23 Aligned_cols=34 Identities=29% Similarity=0.252 Sum_probs=29.2
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
+||.|+ ||||.++++.|+..|.. .+.++|.+.-.
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg-~ItIvD~D~Ve 35 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFG-EIHIIDLDTID 35 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCC-eEEEEcCCCcc
Confidence 788886 79999999999999998 89998876543
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.18 Score=41.78 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=32.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA 67 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~ 67 (231)
+|.++||.|+++++|.+++..+...|++ |+.+.++++..
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~--v~~~~~~~~~~ 180 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGAT--VTATTRSPERA 180 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCE--EEEEeCCHHHH
Confidence 4789999999999999999999999997 77777766443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.31 Score=41.18 Aligned_cols=90 Identities=18% Similarity=0.134 Sum_probs=52.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh------hhhcCCCceeEEEecCCChHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD------LKNRFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~------~~~~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
.++||++.|.|- |.+|+++|+.|.+.|.+ |++.+|.....+.... .....-.+..++.+-+.+++. ..++
T Consensus 13 ~LkgKtVGIIG~-GsIG~amA~nL~d~G~~--ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t-~~V~ 88 (335)
T PRK13403 13 LLQGKTVAVIGY-GSQGHAQAQNLRDSGVE--VVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQ-AHVY 88 (335)
T ss_pred hhCcCEEEEEeE-cHHHHHHHHHHHHCcCE--EEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHH-HHHH
Confidence 578999999987 57999999999999997 6666554322211110 011111123334344444444 4555
Q ss_pred H-HHHHHcCCccEEEEccccC
Q 026924 99 K-SIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 99 ~-~~~~~~g~id~lv~~ag~~ 118 (231)
. ++...+.+=.+|+..-|+.
T Consensus 89 ~~eil~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 89 KAEVEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHHHHhcCCCCCEEEECCCcc
Confidence 3 4555554446676666654
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.21 Score=42.85 Aligned_cols=79 Identities=13% Similarity=0.164 Sum_probs=47.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-HHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~~~ 105 (231)
+|.++||.| +|++|...+..+...|+. +|+.+++++++.+.+.+ .+.+- + .|..+. ..+.+.+.+...
T Consensus 184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~-~Vi~~~~~~~~~~~~~~----~ga~~-~--i~~~~~~~~~~~~~~~~~~-- 252 (365)
T cd08277 184 PGSTVAVFG-LGAVGLSAIMGAKIAGAS-RIIGVDINEDKFEKAKE----FGATD-F--INPKDSDKPVSEVIREMTG-- 252 (365)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH----cCCCc-E--eccccccchHHHHHHHHhC--
Confidence 478999997 489999998888888985 48888886655443322 23211 1 222221 122222333322
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
+.+|++|.+.|
T Consensus 253 ~g~d~vid~~g 263 (365)
T cd08277 253 GGVDYSFECTG 263 (365)
T ss_pred CCCCEEEECCC
Confidence 46899998877
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.73 Score=38.93 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=33.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
.++.|+|+ |.+|.+++..|+..|.-..+++.|.+++.++..
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~ 44 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGE 44 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHH
Confidence 46899996 999999999999888754699999988766553
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.25 Score=40.72 Aligned_cols=40 Identities=28% Similarity=0.361 Sum_probs=33.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
+|+++||.|+++++|.+++..+...|++ |+.++++.+..+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~--v~~~~~~~~~~~ 175 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGAT--VIGTVSSEEKAE 175 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEcCCHHHHH
Confidence 5789999999999999999998899996 777766654433
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.22 Score=43.30 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=31.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
++.+++|.|+++++|.+++..+...|++ ++.++++...
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~--vi~~~~~~~~ 226 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGN--PVAVVSSPEK 226 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCe--EEEEcCCHHH
Confidence 4689999999999999999888889997 6666665543
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.26 Score=42.30 Aligned_cols=37 Identities=32% Similarity=0.387 Sum_probs=32.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
..+.||++.|.|- |.||+.+|+.|...|++ |+..+|+
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~--V~~~dr~ 191 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVK--LLATRRS 191 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCE--EEEECCC
Confidence 3678999999998 58999999999999997 8888876
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.2 Score=43.40 Aligned_cols=42 Identities=21% Similarity=0.191 Sum_probs=33.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
++.+++|+|+++++|.+++..+...|++ ++.+++++++.+.+
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~--vv~~~~s~~~~~~~ 234 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGAN--PVAVVSSEEKAEYC 234 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCe--EEEEeCCHHHHHHH
Confidence 4789999999999999999888889997 66667665544433
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.051 Score=42.04 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=29.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
++.|.|+ |-+|+.+|..++..|++ |.+.+++++.++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~--V~l~d~~~~~l~~ 37 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYE--VTLYDRSPEALER 37 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSE--EEEE-SSHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCc--EEEEECChHHHHh
Confidence 4678888 78999999999999997 9999998776554
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.3 Score=43.27 Aligned_cols=36 Identities=36% Similarity=0.471 Sum_probs=31.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA 67 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~ 67 (231)
++.|+||.|.+|.++++.|.+.|.+ |.+.+|+++..
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~--V~v~~r~~~~~ 37 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFE--VIVTGRDPKKG 37 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCE--EEEEECChHHH
Confidence 5899999999999999999999986 88888886553
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.28 Score=41.34 Aligned_cols=87 Identities=15% Similarity=0.050 Sum_probs=52.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc------chhhhhhcCCCceeEEEecCCChHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT------GLLDLKNRFPERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~------~~~~~~~~~~~~v~~~~~Dls~~~~v~~~ 97 (231)
..+.|||+.|.|- |.||+++|+.+..-|++ |+..++.....+ .+.++++ ..++..+.+-++.+. +.+
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~--V~~~d~~~~~~~~~~~~~~l~ell~--~sDvv~lh~Plt~~T--~~l 213 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAK--VVYYSTSGKNKNEEYERVSLEELLK--TSDIISIHAPLNEKT--KNL 213 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCE--EEEECCCccccccCceeecHHHHhh--cCCEEEEeCCCCchh--hcc
Confidence 4689999999998 58999999999999997 888887532211 1222222 235666666665543 222
Q ss_pred HHHH-HHHcCCccEEEEccccC
Q 026924 98 AKSI-KEKYGSLNLLINASGIL 118 (231)
Q Consensus 98 ~~~~-~~~~g~id~lv~~ag~~ 118 (231)
+++- .+.+ +.+.++-|.+-+
T Consensus 214 i~~~~~~~M-k~~a~lIN~aRG 234 (311)
T PRK08410 214 IAYKELKLL-KDGAILINVGRG 234 (311)
T ss_pred cCHHHHHhC-CCCeEEEECCCc
Confidence 3221 1122 455555566543
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.2 Score=42.57 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=48.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|+++||+|+ +++|...+..+.+.|++ .|+.+++++++.+.+.+ .+.+. ..|..+.+.. +++.+..
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~-~v~~~~~~~~~~~~~~~----~ga~~---~i~~~~~~~~----~~l~~~~~ 238 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGAS-KIIVSEPSEARRELAEE----LGATI---VLDPTEVDVV----AEVRKLTG 238 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHH----hCCCE---EECCCccCHH----HHHHHHhC
Confidence 4789999985 79999999998899995 47777776655443322 23221 1244333322 2232222
Q ss_pred -CCccEEEEccc
Q 026924 106 -GSLNLLINASG 116 (231)
Q Consensus 106 -g~id~lv~~ag 116 (231)
+.+|+++.+.|
T Consensus 239 ~~~~d~vid~~g 250 (351)
T cd08233 239 GGGVDVSFDCAG 250 (351)
T ss_pred CCCCCEEEECCC
Confidence 24999999887
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.19 Score=42.20 Aligned_cols=42 Identities=31% Similarity=0.376 Sum_probs=34.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
++.+++|.|+++.+|.+++..+.+.|++ ++.++++.+..+.+
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~--vi~~~~~~~~~~~~ 203 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAK--VIAVTSSESKAKIV 203 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH
Confidence 4789999999999999999999999997 77777766554433
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.66 Score=36.65 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=43.6
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcC-----------CCceeEEEecCCChHHHHHHH
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRF-----------PERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~-----------~~~v~~~~~Dls~~~~v~~~~ 98 (231)
....||+|.||.+++++|++.|++ |++..|+.++ .+...+.+... ..++.++.+- .+.+..+.
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~e--V~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~ 77 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHE--VIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVL 77 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCe--EEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHH
Confidence 345667789999999999999997 7666555444 33333322111 1233333332 35677777
Q ss_pred HHHHHHcC
Q 026924 99 KSIKEKYG 106 (231)
Q Consensus 99 ~~~~~~~g 106 (231)
.++.+.++
T Consensus 78 ~~l~~~~~ 85 (211)
T COG2085 78 AELRDALG 85 (211)
T ss_pred HHHHHHhC
Confidence 88877664
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.33 Score=40.83 Aligned_cols=38 Identities=18% Similarity=0.010 Sum_probs=32.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
..+.||++.|.|- |.||+++|+.+...|++ |+..+|+.
T Consensus 118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~--V~~~~r~~ 155 (303)
T PRK06436 118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMN--IYAYTRSY 155 (303)
T ss_pred CCCCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCCC
Confidence 3678999999987 57999999988888997 88888863
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.36 Score=40.40 Aligned_cols=75 Identities=19% Similarity=0.126 Sum_probs=51.0
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEec--CCChHHHHHHHHHHHHHcCCc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD--LTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D--ls~~~~v~~~~~~~~~~~g~i 108 (231)
+||.|++ |||..+++.|+..|.. ++.++|.+.-....+. .++.+..-| + ....++.+.+.+++..+.+
T Consensus 2 VLIvGaG-GLGs~vA~~La~aGVg-~ItlvD~D~Ve~sNL~-------RQ~L~~~~D~~i-Gk~Ka~aaa~~L~~iNP~v 71 (307)
T cd01486 2 CLLLGAG-TLGCNVARNLLGWGVR-HITFVDSGKVSYSNPV-------RQSLFTFEDCKG-GKPKAEAAAERLKEIFPSI 71 (307)
T ss_pred EEEECCC-HHHHHHHHHHHHcCCC-eEEEECCCEeccccCC-------cccccccchhhc-CccHHHHHHHHHHHHCCCc
Confidence 6777765 8999999999999998 8999988654433321 122222334 3 3346777788888777777
Q ss_pred cEEEEcc
Q 026924 109 NLLINAS 115 (231)
Q Consensus 109 d~lv~~a 115 (231)
++-.++-
T Consensus 72 ~v~~~~~ 78 (307)
T cd01486 72 DATGIVL 78 (307)
T ss_pred EEEEeee
Confidence 7665544
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.21 Score=43.47 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=46.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|+++||. |.|+||..++..+...|++ .++..++++++.+.+. +.+.+ ..|.....+..+.+.++.. ..
T Consensus 185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~-~vi~~d~~~~r~~~a~----~~Ga~----~v~~~~~~~~~~~v~~~~~-~~ 253 (393)
T TIGR02819 185 PGSTVYIA-GAGPVGLAAAASAQLLGAA-VVIVGDLNPARLAQAR----SFGCE----TVDLSKDATLPEQIEQILG-EP 253 (393)
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHcCCc-eEEEeCCCHHHHHHHH----HcCCe----EEecCCcccHHHHHHHHcC-CC
Confidence 47899995 5689999998888889997 4555556544333322 22332 1333322233222333221 12
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.+.|.
T Consensus 254 g~Dvvid~~G~ 264 (393)
T TIGR02819 254 EVDCAVDCVGF 264 (393)
T ss_pred CCcEEEECCCC
Confidence 58999999985
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.57 E-value=1.3 Score=37.70 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=29.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCcc-----EEEEeecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP 64 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~-----~vi~~~r~~ 64 (231)
++.|+|++|.+|.+++..|+..|.-. .+++.|.++
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP 44 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence 68999999999999999999888633 388888865
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.43 Score=40.98 Aligned_cols=37 Identities=24% Similarity=0.104 Sum_probs=29.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.|+++||.|+ |++|..++..+...|++ |++++.+.++
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~--vi~~~~~~~~ 219 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLK--VTVISSSSNK 219 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCcch
Confidence 5789999765 89999998888889997 6666665543
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.28 Score=45.81 Aligned_cols=40 Identities=8% Similarity=0.018 Sum_probs=34.6
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.++++++++|.|+ ||+|..++..|+..|.. .+.++|.+.
T Consensus 38 Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG-~l~LvD~D~ 77 (679)
T PRK14851 38 QERLAEAKVAIPGM-GGVGGVHLITMVRTGIG-RFHIADFDQ 77 (679)
T ss_pred HHHHhcCeEEEECc-CHHHHHHHHHHHHhCCC-eEEEEcCCE
Confidence 34778999999995 58999999999999997 899988754
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.2 Score=42.50 Aligned_cols=40 Identities=23% Similarity=0.212 Sum_probs=31.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
+|+++||+| .|++|...+..+...|++ .|+.+++++++.+
T Consensus 160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~-~v~~~~~~~~~~~ 199 (347)
T PRK10309 160 EGKNVIIIG-AGTIGLLAIQCAVALGAK-SVTAIDINSEKLA 199 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCC-eEEEECCCHHHHH
Confidence 478999997 589999999888889997 4677777665544
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.38 Score=41.02 Aligned_cols=26 Identities=31% Similarity=0.259 Sum_probs=23.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDK 54 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~ 54 (231)
+.++|.||+|.+|+.+++.|.++|+.
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp 27 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFP 27 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC
Confidence 46999999999999999999998764
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=93.39 E-value=1.3 Score=39.20 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=50.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhc-------CCccEEEEeecCCCCccchhhhhhc-C---CCceeEEEecCCChHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK-------NDKGCVIATCRNPNGATGLLDLKNR-F---PERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~-------G~~~~vi~~~r~~~~~~~~~~~~~~-~---~~~v~~~~~Dls~~~~v~~~ 97 (231)
-++.|+|++|.+|.+++..|+.. |....+++.+++++.++...-++.. . ..++.. ..| +
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~~--~------- 170 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GID--P------- 170 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ecC--C-------
Confidence 36899999999999999999987 6533589999998887764322221 1 112111 111 1
Q ss_pred HHHHHHHcCCccEEEEccccC
Q 026924 98 AKSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~ 118 (231)
.+.+..-|++|..+|..
T Consensus 171 ----ye~~kdaDiVVitAG~p 187 (444)
T PLN00112 171 ----YEVFQDAEWALLIGAKP 187 (444)
T ss_pred ----HHHhCcCCEEEECCCCC
Confidence 22335789999999964
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.3 Score=41.66 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=31.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
+|+++||+| ++++|++++..+...|++ .|+.++++++..+
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~-~v~~~~~~~~~~~ 216 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGAR-RVIVIDGSPERLE 216 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCC-eEEEEcCCHHHHH
Confidence 678999997 589999999888889993 3777777655433
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.16 Score=45.48 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=31.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+++++.++|.|+ |++|+++|+.|.++|++ |.+.+++.
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~--V~~~d~~~ 49 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGAR--VTVVDDGD 49 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCc
Confidence 457889999997 57999999999999997 77777654
|
|
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.14 Score=43.50 Aligned_cols=38 Identities=21% Similarity=0.107 Sum_probs=34.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++++|++||.|+ |-+|..++++|.++|+. .|+++.|+.
T Consensus 171 ~l~~k~vLvIGa-Gem~~l~a~~L~~~g~~-~i~v~nRt~ 208 (338)
T PRK00676 171 KSKKASLLFIGY-SEINRKVAYYLQRQGYS-RITFCSRQQ 208 (338)
T ss_pred CccCCEEEEEcc-cHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence 578999999999 79999999999999987 699999986
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.24 Score=41.60 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=44.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++++++||+|++|.+.+......|++ |+.+++++++.+.+.+ .+.+. . .|..+.+..++ +.+... ...+
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~--vi~~~~~~~~~~~~~~----~g~~~-~--i~~~~~~~~~~-v~~~~~-~~~~ 213 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIK--VINIVRRKEQVDLLKK----IGAEY-V--LNSSDPDFLED-LKELIA-KLNA 213 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCcE-E--EECCCccHHHH-HHHHhC-CCCC
Confidence 44455599999999998777778996 7777777655443332 23221 1 23333222222 222211 1258
Q ss_pred cEEEEccc
Q 026924 109 NLLINASG 116 (231)
Q Consensus 109 d~lv~~ag 116 (231)
|+++.+.|
T Consensus 214 d~vid~~g 221 (324)
T cd08291 214 TIFFDAVG 221 (324)
T ss_pred cEEEECCC
Confidence 99998887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.3 Score=40.49 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=61.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|-+++--||+++.|+++.......|++ -+-+-|+....+++.+.++.+|..-.+..-.+.+.+ +.+.+.+++
T Consensus 160 ~GD~vIQNganS~VG~~ViQlaka~Gik--tinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~-----~~k~~~~~~ 232 (354)
T KOG0025|consen 160 KGDSVIQNGANSGVGQAVIQLAKALGIK--TINVVRDRPNIEELKKQLKSLGATEVITEEELRDRK-----MKKFKGDNP 232 (354)
T ss_pred CCCeeeecCcccHHHHHHHHHHHHhCcc--eEEEeecCccHHHHHHHHHHcCCceEecHHHhcchh-----hhhhhccCC
Confidence 4778888999999999999888889998 666678888888888877777764443333333332 333444678
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++..-+||+|
T Consensus 233 ~prLalNcVG 242 (354)
T KOG0025|consen 233 RPRLALNCVG 242 (354)
T ss_pred CceEEEeccC
Confidence 8999999998
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.18 Score=36.23 Aligned_cols=66 Identities=24% Similarity=0.317 Sum_probs=43.7
Q ss_pred chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC--CccEEEEccc
Q 026924 39 GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG--SLNLLINASG 116 (231)
Q Consensus 39 gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g--~id~lv~~ag 116 (231)
|||+..+..+...|++ |+.+++++.+.+.+.+ .+. . ...|-++.+ +.+++++..+ ++|++|.++|
T Consensus 1 ~vG~~a~q~ak~~G~~--vi~~~~~~~k~~~~~~----~Ga--~-~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g 67 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAK--VIATDRSEEKLELAKE----LGA--D-HVIDYSDDD----FVEQIRELTGGRGVDVVIDCVG 67 (130)
T ss_dssp HHHHHHHHHHHHTTSE--EEEEESSHHHHHHHHH----TTE--S-EEEETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred ChHHHHHHHHHHcCCE--EEEEECCHHHHHHHHh----hcc--c-ccccccccc----cccccccccccccceEEEEecC
Confidence 5889988888889975 9999988766554433 231 1 124554444 4455555443 6999999998
Q ss_pred c
Q 026924 117 I 117 (231)
Q Consensus 117 ~ 117 (231)
.
T Consensus 68 ~ 68 (130)
T PF00107_consen 68 S 68 (130)
T ss_dssp S
T ss_pred c
Confidence 3
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 231 | ||||
| 1sny_A | 267 | Carbonyl Reductase Sniffer Of D. Melanogaster Lengt | 3e-10 | ||
| 1yo6_A | 250 | Crystal Structure Of The Putative Carbonyl Reductas | 2e-08 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 4e-08 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-07 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-07 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 7e-07 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 1e-06 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 2e-06 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 2e-06 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 3e-06 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-06 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 5e-06 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 1e-05 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 1e-05 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 2e-05 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 3e-05 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 8e-05 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 8e-05 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 9e-05 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 2e-04 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 3e-04 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 3e-04 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 3e-04 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 4e-04 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 4e-04 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 5e-04 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 5e-04 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 5e-04 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 6e-04 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 7e-04 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 7e-04 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 8e-04 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 8e-04 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 8e-04 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 8e-04 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 8e-04 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 8e-04 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 8e-04 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 9e-04 |
| >pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267 | Back alignment and structure |
|
| >pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 2e-56
Identities = 54/180 (30%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
L+ G +RG+GL K LL + TCRN A L DL + +L++DL
Sbjct: 25 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRN 83
Query: 91 ESTIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
+ I+ LN+L N +GI + V L+ + N V
Sbjct: 84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIA------PKSARITAVRSQELLDTLQTNTVV 137
Query: 149 PILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
PI++ K PLLK + A + N+S+ +GSI N GG ++YR SK+ALN
Sbjct: 138 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 197
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 1e-53
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+V GA+RGIGL +QL++ + +IAT R+ AT L +K+ R+ VL L +T +
Sbjct: 7 VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTVTCD 63
Query: 92 STIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+++ + E G L+LLIN +G+ L T + ++ + +VN
Sbjct: 64 KSLDTFVSKVGEIVGSDGLSLLINNAGV------LLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 150 ILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWH----SYRASKA 200
+L+ + + PLLK G + A V +S+ +GSI DN G +YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 201 ALN 203
A+N
Sbjct: 178 AIN 180
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 4e-24
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
LV GAS G G A+ + D VI T R L DL +P+R + + LD+T
Sbjct: 9 LVTGASSGFGRAIAEAAVAAGDT--VIGTARRT---EALDDLVAAYPDRAEAISLDVTDG 63
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
I+ A + +YG +++L+N +G + ETT ++ +E++ GP
Sbjct: 64 ERIDVVAADVLARYGRVDVLVNNAGRTQVGAF--EETTERELRDL-----FELHVFGPAR 116
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ + + P ++ G+G V N+S+ G + G+ +Y A+KAAL
Sbjct: 117 LTRALLPQMRERGSG------SVVNISSFGGQLS---FAGFSAYSATKAAL 158
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 1e-21
Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPE 79
S+ + V+LV G ++GIGL + L G V+ T R+ G + L+
Sbjct: 1 SSGIH----VALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLS 55
Query: 80 RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
QLD+ +I A ++++YG L++L+N +GI P + E +
Sbjct: 56 -PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVT--- 109
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
+ N G V + PL+K G R V N+S+ + +
Sbjct: 110 --MKTNFFGTRDVCTELLPLIKPQG----RVV----NVSSIMSVRALKSCSPELQQKFRS 159
Query: 200 AALNHDKIC 208
+ +++
Sbjct: 160 ETITEEELV 168
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-19
Identities = 34/178 (19%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-----LLDLKNRFPERLDVL 84
+ L+ GAS G G A+ L + V A+ R+ G + L L
Sbjct: 7 IILITGASSGFGRLTAEALAGAGHR--VYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+LD+ + +++ + I + G +++LI+ +G + T + + Y++
Sbjct: 65 ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPA--EAFTPEQFAE-----LYDI 117
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N + V + P ++ G ++ +S+ + G Y A+KAA+
Sbjct: 118 NVLSTQRVNRAALPHMRRQKHG------LLIWISSSSSAGGTPPYLAP--YFAAKAAM 167
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 1e-19
Identities = 45/214 (21%), Positives = 78/214 (36%), Gaps = 33/214 (15%)
Query: 19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRF 77
+ K ++V G ++GIG E KQL V+ TCR+ G + LKN
Sbjct: 3 ETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIM--VVLTCRDVTKGHEAVEKLKNSN 60
Query: 78 PERLDVLQLDLT-VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
E + QLD+T +T+ + A IK +G L++L+N +G+ +
Sbjct: 61 HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120
Query: 137 SLMLA-----------------------YEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173
++N G V + + PLL++ +
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP------R 174
Query: 174 VANLSARVGSIGDNRLGGWHSYRASKAALNHDKI 207
+ N+S+ GS+ AL ++I
Sbjct: 175 IVNVSSSTGSLKYVSNETALEILGDGDALTEERI 208
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-19
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
G V LV G SRGIG L + V R+ L LK ++ +R + D
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+T +S ++ + + +G ++ L+ +G+ L+P +N+++ ++ Y++N
Sbjct: 59 ITEDSVLKQLVNAAVKGHGKIDSLVANAGV------LEPVQNVNEIDVNAWKKLYDINFF 112
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ ++ P LK + +S+ ++ + W +Y +SKAALNH
Sbjct: 113 SIVSLVGIALPELKKTNGNV-------VFVSSDACNMYFS---SWGAYGSSKAALNH 159
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 5e-18
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFPERLDVLQLD 87
L+ G S GIGL A +L + V AT R+ L + P L+ LQLD
Sbjct: 6 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
+ ++ A+ + + E G +++L+ +G+ + L+ + V +VN V
Sbjct: 66 VRDSKSVAAARERVTE--GRVDVLVCNAGL-GLLGPLE-ALGEDAVAS-----VLDVNVV 116
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + +++ P +K G+G V + G +G Y ASK AL
Sbjct: 117 GTVRMLQAFLPDMKRRGSG------RVLVTGSVGGLMG-LPFNDV--YCASKFAL 162
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 6e-17
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 20/186 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPE-RLDV 83
V ++ GASRG G A QL G ++ + R+ + L + L + P+ ++ +
Sbjct: 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64
Query: 84 LQLDLTVESTIEASAKSIKEKYG----SLNLLINASGILS-IPNVLQPETTLNKVEKSSL 138
DL E+ ++ +++E LLIN + L + L +V
Sbjct: 65 AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN--- 121
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
+ +N + + + G+ + V +++L A GW Y A
Sbjct: 122 --YWALNLTSMLCLTSGTLNAFQDSP-GLSKTVVNISSLCALQP------YKGWGLYCAG 172
Query: 199 KAALNH 204
KAA +
Sbjct: 173 KAARDM 178
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 5e-16
Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 22/177 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +V GA G+G L+E+ + V R L + + +
Sbjct: 2 SLGHIIVTGAGSGLGRALTIGLVERGHQ--VSMMGRR---YQRLQQQELLLGNAVIGIVA 56
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
DL ++ + + E G L+++ +G V T ++ + ++ E N
Sbjct: 57 DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVG--VYTAEQIRR---VM--ESNL 109
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
V ILV + L+ G V+AN+ + +G Y ASK +
Sbjct: 110 VSTILVAQQTVRLIGERG-------GVLANVLSSAAQVG---KANESLYCASKWGMR 156
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-15
Identities = 34/178 (19%), Positives = 55/178 (30%), Gaps = 31/178 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
LV G S +G E K K+ I+ N P +
Sbjct: 21 MSKNILVLGGSGALGAEVVKFFKSKSWN--TISIDFREN------------PNADHSFTI 66
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
+ E I++ + I K ++ + A+G S N + L + M+ +N
Sbjct: 67 KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASS-DEFL---KSVKGMID--MNL 120
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ LL GG + A G +Y A+KAA +H
Sbjct: 121 YSAFASAHIGAKLLNQGG--------LFVLTGASAALNRT---SGMIAYGATKAATHH 167
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 1e-14
Identities = 41/186 (22%), Positives = 67/186 (36%), Gaps = 34/186 (18%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
KG V LV GA+RGIG +A G V+ R + D +
Sbjct: 13 KGRVILVTGAARGIGAAAARAYAAH-------GASVVLLGRTEASLAEVSDQIKSAGQPQ 65
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKS 136
+ L L+ A ++ ++G L+ L++ + I+ L P+ +V
Sbjct: 66 PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQV--- 122
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
VN ++ + + PLLK ++ S+ VG G W +Y
Sbjct: 123 -----MHVNVNATFMLTRALLPLLKRSEDA-----SIA-FTSSSVGRKGR---ANWGAYG 168
Query: 197 ASKAAL 202
SK A
Sbjct: 169 VSKFAT 174
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-14
Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 20/178 (11%)
Query: 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVL 84
G + L+ GA GIG A + + + N +G ++
Sbjct: 29 VTGEIVLITGAGHGIGRLTAYEFAKL---KSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+D + I +SAK +K + G +++L+N +G++ ++ T ++EK+ +EV
Sbjct: 86 VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF--ATQDPQIEKT-----FEV 138
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N + K P + + + + +++ G + L +Y +SK A
Sbjct: 139 NVLAHFWTTKAFLPAM------TKNNHGHIVTVASAAGHVSVPFLL---AYCSSKFAA 187
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-14
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDV 83
+ A GIGL+ +++L+++N K T L +LK P+ +
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITF 59
Query: 84 LQLDLTVE-STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
D+TV + + K I ++ ++++LIN +GIL + Q E T+
Sbjct: 60 HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL---DDHQIERTIA----------- 105
Query: 143 EVNAVGPILVIKHMSPLL---KVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
+N G + + K G G ++AN+ + G Y ASK
Sbjct: 106 -INFTGLVNTTTAILDFWDKRKGGPGG------IIANICSVTGFNAI---HQVPVYSASK 155
Query: 200 AAL 202
AA+
Sbjct: 156 AAV 158
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-13
Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
L+ GAS+ +GL A +LLE G VI + R + +L+ L
Sbjct: 26 SSAPILITGASQRVGLHCALRLLEH---GHRVIISYRT--EHASVTELR---QAGAVALY 77
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D + E+ I A +K + SL +++ + + ++ + V+
Sbjct: 78 GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRM--------FSVH 129
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ P L+ H PLL +V ++S V G +Y A+KA L
Sbjct: 130 MLAPYLINLHCEPLLTASEVA-----DIV-HISDDVTRKG---SSKHIAYCATKAGLES 179
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 3e-13
Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 37/179 (20%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
LV G S+GIG + LL+ VI + + E L +
Sbjct: 3 AMANYLVTGGSKGIGKAVVELLLQ---NKNHTVINIDIQQSFSA----------ENLKFI 49
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYE 143
+ DLT + I I K S + + +GIL ++ ++ KV +
Sbjct: 50 KADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKV--------LD 99
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+N I IK + LKVG + + + I +Y SK A+
Sbjct: 100 LNVWSSIYFIKGLENNLKVGASIV--------FNGSDQCFIAKP---NSFAYTLSKGAI 147
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 4e-13
Identities = 43/186 (23%), Positives = 67/186 (36%), Gaps = 34/186 (18%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKG-CVIATCRNPNGATGLLD-LKNRFPER 80
+ LV GAS GIG + +A+ G VI RN + + +
Sbjct: 11 NDRIILVTGASDGIGREAAMTYARY-------GATVILLGRNEEKLRQVASHINEETGRQ 63
Query: 81 LDVLQLDLTV--ESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKS 136
LDL + A+ I Y L+ +++ +G+L P Q V
Sbjct: 64 PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV--- 120
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
+VN ++ + + PLL G ++V S+ VG G W +Y
Sbjct: 121 -----MQVNVNATFMLTQALLPLLLKSDAG-----SLV-FTSSSVGRQG---RANWGAYA 166
Query: 197 ASKAAL 202
ASK A
Sbjct: 167 ASKFAT 172
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 4e-13
Identities = 41/205 (20%), Positives = 76/205 (37%), Gaps = 35/205 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
G + GASRGIG A + + G ++ + LL E ++
Sbjct: 44 AGCTVFITGASRGIGKAIALKAAKD---GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 100
Query: 83 ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
+D+ E I A+ + +K+G +++L+N + +S+ N L +T +++
Sbjct: 101 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTL--DTPTKRLD---- 154
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
L VN G L K P LK + N+S + +Y +
Sbjct: 155 -LMMNVNTRGTYLASKACIPYLKKSKVA------HILNISPPLNLNP-VWFKQHCAYTIA 206
Query: 199 KAALN----------HDKICVSGVW 213
K ++ +I V+ +W
Sbjct: 207 KYGMSMYVLGMAEEFKGEIAVNALW 231
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 65.2 bits (160), Expect = 5e-13
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V+LV G +RG+G + ++ + K V+ + + + L
Sbjct: 6 TGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAA---ELADAARYVHL 60
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T + +A+ + +G L++L+N +GIL+I + + L + ++ ++ +VN
Sbjct: 61 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE--DYALTEWQR--IL---DVNL 113
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
G L I+ + +K G G +++ N+S+ G G H Y A+K A
Sbjct: 114 TGVFLGIRAVVKPMKEAGRG-----SII-NISSIEGLAGTV---ACHGYTATKFA 159
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 1e-12
Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPE 79
S++ + G++++ GAS+GIG A L + V+ R+ + + N+ +
Sbjct: 2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYR--VVLIARSKQNLEKVHDEIMRSNKHVQ 59
Query: 80 RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
VL LD+T + + K I +KYG++++L+NA+ + ++ +P K+
Sbjct: 60 EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKI------ 113
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
E+N + ++K ++ ++ + + N+++R G Y ++K
Sbjct: 114 --MEINVIAQYGILKTVTEIM------KVQKNGYIFNVASRAAKYG---FADGGIYGSTK 162
Query: 200 AALN 203
AL
Sbjct: 163 FALL 166
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 2e-12
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G ++ G +RG+G E A+Q + + V+ + L
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAATAR---ELGDAARYQHL 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
D+T+E + +E++GS++ L+N +GI + + ++ KV E
Sbjct: 59 DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLE--TESVERFRKV--------VE 108
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
+N G + +K + P +K G G ++V N+S+ G +G SY ASK
Sbjct: 109 INLTGVFIGMKTVIPAMKDAGGG-----SIV-NISSAAGLMGLA---LTSSYGASKWG 157
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 3e-12
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 23/182 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V++V G ++ IGL L E G VI + AT ++ + +
Sbjct: 12 DNRVAIVTGGAQNIGLACVTALAE---AGARVIIADLDEAMATKAVEDLRMEGHDVSSVV 68
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
+D+T +++ + +S+ E+ G +++L+ +GI I V + T K
Sbjct: 69 MDVTNTESVQNAVRSVHEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQ--------V 119
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
++N G + + ++ G V+ + + G I NR +Y ASKA +
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQKQG------VIVAIGSMSGLIV-NRPQQQAAYNASKAGV 172
Query: 203 NH 204
+
Sbjct: 173 HQ 174
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 3e-12
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V+++ G + GIGL A + +E+ K V+ T R+ + P+++ Q
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQH 61
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
D + E + ++ +G ++ L+N +GI +V ETT K+
Sbjct: 62 DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVE--ETTTAEWRKL--------LA 111
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
VN G + +K G G A + N+S+ G +GD +Y ASK A
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFVGD---PSLGAYNASKGA 161
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 4e-12
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+G ++V G + G+GL ++L+E G V+ T RN + + ++ F R+ L+
Sbjct: 7 QGKKAIVIGGTHGMGLATVRRLVE---GGAEVLLTGRN---ESNIARIREEFGPRVHALR 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D+ + I + + G+++LL +G+ + ++V ++S + VN
Sbjct: 61 SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL-------EPFDQVSEASYDRQFAVN 113
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHD 205
G ++ ++PL++ GG ++V S+ G G Y ASKAAL
Sbjct: 114 TKGAFFTVQRLTPLIREGG-------SIV-FTSSVADEGG---HPGMSVYSASKAAL--- 159
Query: 206 KICVSGVWSKE 216
+ + V + E
Sbjct: 160 -VSFASVLAAE 169
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 5e-12
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 37/180 (20%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPERLDVLQ 85
+ V +V GAS GIG A++ ++ G+ L + + + D ++
Sbjct: 7 RDKVVIVTGASMGIGRAIAERFVD--------------EGSKVIDLSIHDPGEAKYDHIE 52
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
D+T ++AS I ++YGS+++L+N +GI S + ++ ++
Sbjct: 53 CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIE--SMSMGEWRRI--------I 102
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+VN G K P + ++V N+S+ SI +Y SK A+
Sbjct: 103 DVNLFGYYYASKFAIPYMIRSRDP-----SIV-NISSVQASIIT---KNASAYVTSKHAV 153
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 6e-12
Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 34/204 (16%)
Query: 9 RSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68
R + +W+ ++LV GAS GIG A+ L+++ K V+ R
Sbjct: 13 RENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCART---VG 67
Query: 69 GLLDLKNRFPE-----RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
+ +L L + DL+ E I + +I+ ++ +++ IN +G+
Sbjct: 68 NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA----- 122
Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA---VVANLSAR 180
TL S + VN + + + +K ER+V ++
Sbjct: 123 --RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMK------ERNVDDGHIIN----- 169
Query: 181 VGSIGDNR---LGGWHSYRASKAA 201
+ S+ +R L H Y A+K A
Sbjct: 170 INSMSGHRVLPLSVTHFYSATKYA 193
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 1e-11
Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 25/177 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
++++ GA+ GIGL AK+ + + + V T R L +Q
Sbjct: 28 NAKIAVITGATSGIGLAAAKRFVAEGAR--VFITGRR---KDVLDAAIAEIGGGAVGIQA 82
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
D + ++ + +K + G +++L +G S+ + + E + ++ N
Sbjct: 83 DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDT--------FDRN 134
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + ++ PLL G +VV + GS G + Y ASKAAL
Sbjct: 135 VKGVLFTVQKALPLLARGS-------SVV-LTGSTAGSTG---TPAFSVYAASKAAL 180
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 1e-11
Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 27/182 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+ V+++ GA GIGLE ++ L G V+ G
Sbjct: 10 ENKVAIITGACGGIGLETSRVLARA---GARVVLADLPETDLAGAAA---SVGRGAVHHV 63
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
+DLT E ++ A + +G L+++ N + ++L + T+ + +
Sbjct: 64 VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT--------F 115
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VNA G +L+ K+ P L G G A+V N+S+ +Y +KAA+
Sbjct: 116 TVNARGTMLMCKYAIPRLISAGGG-----AIV-NISSATAHAAY---DMSTAYACTKAAI 166
Query: 203 NH 204
Sbjct: 167 ET 168
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 1e-11
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 34/179 (18%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
V++V G S GIGL L+ K V++ + D ++
Sbjct: 13 TDKVAIVTGGSSGIGLAVVDALVRYGAK--VVSVSLDEKSDV----------NVSDHFKI 60
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
D+T E ++ + + +KYG +++L+N +GI + T ++ +
Sbjct: 61 DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLH--LTPTEIWRRI--------ID 110
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VN G L+ K+ P++ G G +++ N+++ +Y SK AL
Sbjct: 111 VNVNGSYLMAKYTIPVMLAIGHG-----SII-NIASVQSYAAT---KNAAAYVTSKHAL 160
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 2e-11
Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 16/179 (8%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
KG V+ V G+S GIG A+ + G V + L+ + +
Sbjct: 33 KGKVASVTGSSGGIGWAVAEAYAQ---AGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+++ ++E + ++ +G++++ + +G+ + K ++ V+
Sbjct: 90 CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNK--II---SVD 144
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G ++ + K G G + S+ G I N Y +KAA H
Sbjct: 145 LNGVYYCSHNIGKIFKKNGKG------SLIITSSISGKIV-NIPQLQAPYNTAKAACTH 196
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-11
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 22/179 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
+G +V GAS+GIG E A L + G V+ T R+ ++ +
Sbjct: 27 QGKKVIVTGASKGIGREMAYHLAKM---GAHVVVTARSKETLQKVVSHCLELGAASAHYI 83
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ + E + G L++LI + N+ ++ V K M EV
Sbjct: 84 AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLF--HDDIHHVRK--SM---EV 136
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
N + +++ P+LK + +S+ G + + Y ASK AL+
Sbjct: 137 NFLSYVVLTVAALPMLKQSN-------GSIVVVSSLAGKVAYPMVAA---YSASKFALD 185
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 2e-11
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 30/179 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+G V+LV G + G+GLE K LL + G V + N L ER ++
Sbjct: 5 QGKVALVTGGASGVGLEVVKLLLGE---GAKVAFSDINEAAGQQLAA---ELGERSMFVR 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
D++ E+ +++ + G+LN+L+N +GIL ++ L +++
Sbjct: 59 HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDME--TGRLEDFSRL--------L 108
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
++N + + +K G G +++ N+++ + + Y ASKAA
Sbjct: 109 KINTESVFIGCQQGIAAMKETG-G-----SII-NMASVSSWLPI---EQYAGYSASKAA 157
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 3e-11
Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 22/179 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFP-ERLDV 83
V++V G S GIGL + LLE G +A C R+ L+ RFP RL
Sbjct: 7 SEAVAVVTGGSSGIGLATVELLLE---AGAAVAFCARDGERLRAAESALRQRFPGARLFA 63
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
D+ + A A++ + G ++L+N +G +T + + +
Sbjct: 64 SVCDVLDALQVRAFAEACERTLGCASILVNNAGQ-------GRVSTFAETTDEAWSEELQ 116
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ I ++ P L+ A+V +++ + S + + A++A +
Sbjct: 117 LKFFSVIHPVRAFLPQLESRADA-----AIV-CVNSLLASQPE---PHMVATSAARAGV 166
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 4e-11
Identities = 38/184 (20%), Positives = 61/184 (33%), Gaps = 26/184 (14%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPER 80
KG L+ G+S+GIG FA+ G + + P +
Sbjct: 6 KGKRVLITGSSQGIGLATARLFARA-------GAKVGLHGRKAPANIDETIASMRADGGD 58
Query: 81 LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSL 138
DL + K+G +++LIN +G L L +T + V
Sbjct: 59 AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAV----- 113
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
+ N ++ K P L + AV+ + + G G G Y A+
Sbjct: 114 ---MDANIRSVVMTTKFALPHLAAAAKASGQTSAVI-STGSIAGHTGGG--PGAGLYGAA 167
Query: 199 KAAL 202
KA L
Sbjct: 168 KAFL 171
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 4e-11
Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 19/180 (10%)
Query: 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
S+ + V GA IG E AK+ + V A RN L+ R+
Sbjct: 2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFT--VFAGRRNGEKLAPLVAEIEAAGGRIV 59
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
LD E + A + + + L + I G +L ETT K +
Sbjct: 60 ARSLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPIL--ETTDRVFRK-----VW 111
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
E+ + + + L+ G G + A G G+ ++ ++K L
Sbjct: 112 EMACWAGFVSGRESARLMLAHGQG------KIFFTGATASLRG---GSGFAAFASAKFGL 162
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-11
Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 24/183 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERLDV 83
+ LV G GIG A L+ V+ RNP+ G L+ +
Sbjct: 10 QDRTYLVTGGGSGIGKGVAAGLVAAGAS--VMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLA 141
D+T E + ++ +G L+ +++ +G + +
Sbjct: 68 EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRT-------- 119
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
++N G + V+KH + + GG G + V +S+ S + +Y +K+A
Sbjct: 120 VDLNVNGTMYVLKHAAREMVRGGGG-----SFV-GISSIAASNTH---RWFGAYGVTKSA 170
Query: 202 LNH 204
++H
Sbjct: 171 VDH 173
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 59.8 bits (146), Expect = 5e-11
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 32/180 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G LV G +RGIG A+ + G V P G + F Q
Sbjct: 5 AGKGVLVTGGARGIGRAIAQAFARE---GALVALCDLRPEGKEVAEAIGGAF------FQ 55
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
+DL E + G +++L+N + I + + L L +V
Sbjct: 56 VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRRV--------L 105
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
EVN P+ + + ++ G G A+V N+++ G + +Y ASK L
Sbjct: 106 EVNLTAPMHLSALAAREMRKVGGG-----AIV-NVASVQGLFAE---QENAAYNASKGGL 156
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 8e-11
Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 25/178 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERLDVL 84
G V+LV GA++GIG FA+ LL K K V N + P++ +
Sbjct: 6 NGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFI 63
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
Q D+ + + + + + + +G L++L+N +G+ E K ++
Sbjct: 64 QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV-------NNEKNWEKT--------LQI 108
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N V I + G ++ N+S+ G + Y ASK +
Sbjct: 109 NLVSVISGTYLGLDYMSKQNGG--EGGIII-NMSSLAGLMPV---AQQPVYCASKHGI 160
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-10
Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 23/190 (12%)
Query: 18 SSASASVKW--KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLK 74
+ A S +W K LV G ++GIG ++ G VI TC RN L
Sbjct: 2 AGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAG---FGAVIHTCARNEYELNECLSKW 58
Query: 75 NRFPERLDVLQLDLTVESTIEASAKSIKEKYG-SLNLLINASGILSIPNVLQPETTLNKV 133
+ ++ D ++ E +++ +G L++LIN G +P
Sbjct: 59 QKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA----IRSKPTLDYTAE 114
Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
+ S + N + + PLLK G G + +S+ G +
Sbjct: 115 DFSFHI---STNLESAYHLSQLAHPLLKASGCG------NIIFMSSIAGVVS---ASVGS 162
Query: 194 SYRASKAALN 203
Y A+K ALN
Sbjct: 163 IYSATKGALN 172
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-10
Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 25/184 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
G + GASRGIGL A + G V ++ L + ++
Sbjct: 5 SGKTLFITGASRGIGLAIALRAARD---GANVAIAAKSAVANPKLPGTIHSAAAAVNAAG 61
Query: 83 ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
L+ D+ E + A+ + + +G +++L+N + + + L +T + + + L
Sbjct: 62 GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTL--DTPMKRFD---L 116
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
M VNA G + + P L + L+ G Y +
Sbjct: 117 MQQ--VNARGSFVCAQACLPHLLQAPNP------HILTLAPPPSLNP-AWWGAHTGYTLA 167
Query: 199 KAAL 202
K +
Sbjct: 168 KMGM 171
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-10
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V++V GA GIGL A++L ++ GC V+ + + A + +
Sbjct: 28 AGKVAIVTGAGAGIGLAVARRLADE---GCHVLCADIDGDAADAAAT---KIGCGAAACR 81
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-QPETTLNKVEKSSLMLAYEV 144
+D++ E I A + +G ++ L+ +G++ + +++ ++V +
Sbjct: 82 VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRV--------IAI 133
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N G L KH +P + G G A+V NLS+ G + GG +Y SKA +
Sbjct: 134 NLRGAWLCTKHAAPRMIERGGG-----AIV-NLSSLAGQVAV---GGTGAYGMSKAGIIQ 184
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 1e-10
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V+LV GASRGIG E A L K G V+ T + A + + L
Sbjct: 4 NEKVALVTGASRGIGFEVAHALASK---GATVVGTATSQASAEKFENSMKEKGFKARGLV 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
L+++ +I+ IK + ++++L+N +GI
Sbjct: 61 LNISDIESIQNFFAEIKAENLAIDILVNNAGI 92
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-10
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKN 75
+ ++ + +++ G +R IG A +L + +G V+ + A L+ L
Sbjct: 2 NETSHEASECPAAVITGGARRIGHSIAVRLHQ---QGFRVVVHYRHSEGAAQRLVAELNA 58
Query: 76 RFPERLDVLQLDLTVESTIEASAKSI----KEKYGSLNLLINASGILSIPNVLQPETTLN 131
+ + DL++ S++ + I +G ++L+N + P L P N
Sbjct: 59 ARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTN 117
Query: 132 KVEKSSLMLA-----YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186
+ + A + NAV P+ +I+ + GG R+++VV NL + +
Sbjct: 118 GAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV-NLCDAMTDLP- 175
Query: 187 NRLGGWHSYRASKAAL 202
L G+ Y +K AL
Sbjct: 176 --LPGFCVYTMAKHAL 189
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-10
Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 23/189 (12%)
Query: 17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--K 74
T+++S + ++ V L+ G G+G A +L + K + + G +
Sbjct: 2 TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLE 59
Query: 75 NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNK 132
+ D++ E+ +EA + E++G ++ N +GI N +K
Sbjct: 60 TAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDK 119
Query: 133 VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW 192
V +N G L ++ + +++ G+G VV N ++ G G +G
Sbjct: 120 V--------VSINLRGVFLGLEKVLKIMREQGSG-----MVV-NTASVGGIRG---IGNQ 162
Query: 193 HSYRASKAA 201
Y A+K
Sbjct: 163 SGYAAAKHG 171
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-10
Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
V +V G GIG A+ + V+ N + A + + + +++
Sbjct: 26 NQRVCIVTGGGSGIGRATAELFAKNGAY--VVVADVNEDAAVRVAN---EIGSKAFGVRV 80
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
D++ E+ + K+G +++L+N +G + NV+ PE T +++ VN
Sbjct: 81 DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRI--------MSVN 132
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
G L K++ P+++ G G +++ N ++ + +Y ASK A++
Sbjct: 133 VKGIFLCSKYVIPVMRRNGGG-----SII-NTTSYTATSAI---ADRTAYVASKGAIS 181
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K +++V GA+ G+G+E K L V A RNP L ++ E ++ ++
Sbjct: 4 KKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEI-----EGVEPIES 55
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLA 141
D+ E E +K ++ L++A+ + +E S+
Sbjct: 56 DIVKEVLEEGGVDKLKN-LDHVDTLVHAAAV----------ARDTTIEAGSVAEWHAH-- 102
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
++N + P + + + P L+ V +++ G+ G Y ASK A
Sbjct: 103 LDLNVIVPAELSRQLLPALRAAS-------GCVIYINSGAGNGPH---PGNTIYAASKHA 152
Query: 202 L 202
L
Sbjct: 153 L 153
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-10
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V++V GA+ GIG A + G V+ T GA + + + L+
Sbjct: 11 NDAVAIVTGAAAGIGRAIAGTFAK---AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
++T E EA K+ +++G + +L+N +G P P + +++
Sbjct: 68 CNVTDEQHREAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWA--------FKL 118
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N + + +P ++ G G + N+S+ G + SY +SKAA+NH
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGG------AILNISSMAGENTN---VRMASYGSSKAAVNH 169
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-10
Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 27/186 (14%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
++ G+S GIG + FA++ G V T R+ +
Sbjct: 5 SNKTVIITGSSNGIGRTTAILFAQE-------GANVTITGRSSERLEETRQIILKSGVSE 57
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
++++ + D+T E + S +++G +++L+N +G T
Sbjct: 58 KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT 117
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
+ ++N I + K + P L I N+S+ V + Y +
Sbjct: 118 L---KLNLQAVIEMTKKVKPHLVASKGEI-------VNVSSIVAGPQAQP--DFLYYAIA 165
Query: 199 KAALNH 204
KAAL+
Sbjct: 166 KAALDQ 171
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-10
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 23/192 (11%)
Query: 17 TSSASASVKW--KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDL 73
+ + +W KG +LV G S+GIG ++L G + TC RN L++
Sbjct: 8 MMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAG---LGARVYTCSRNEKELDECLEI 64
Query: 74 KNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNK 132
++ DL + + +++ + G LN+L+N +G+ + + +
Sbjct: 65 WREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV----VIHKEAKDFTE 120
Query: 133 VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW 192
+ + +M N + + PLLK G V LS+ G L
Sbjct: 121 KDYNIIM---GTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIAGFSA---LPSV 168
Query: 193 HSYRASKAALNH 204
Y ASK A+N
Sbjct: 169 SLYSASKGAINQ 180
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 19/182 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFPERLD 82
V+++ G+S GIG A + G V T R+ + ++
Sbjct: 5 AEKVAIITGSSNGIGRATAVLFARE---GAKVTITGRHAERLEETRQQILAAGVSEQNVN 61
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
+ D+T ++ + + K+G L++L+N +G + T S
Sbjct: 62 SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQ---SKTGTAQSIESYDATL 118
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+N I + K P L I N+S+ + + Y +KAA+
Sbjct: 119 NLNLRSVIALTKKAVPHLSSTKGEI-------VNISSIASGLHATP--DFPYYSIAKAAI 169
Query: 203 NH 204
+
Sbjct: 170 DQ 171
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 38/187 (20%), Positives = 62/187 (33%), Gaps = 18/187 (9%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
+ ++V GA++ IG A +L + G VI + A L D L V
Sbjct: 22 EAPAAVVTGAAKRIGRAIAVKLHQ---TGYRVVIHYHNSAEAAVSLADELNKERSNTAVV 78
Query: 84 LQLDLTVESTIEASA----KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
Q DLT + + AS S +G ++L+N + P L + ++
Sbjct: 79 CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA-FYPTPLVQGDHEDNSNGKTVE 137
Query: 140 LAYE----VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSY 195
NA+ P L+ + K + NL + + Y
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP---CMAFSLY 194
Query: 196 RASKAAL 202
K AL
Sbjct: 195 NMGKHAL 201
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 2e-10
Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 20/175 (11%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDL 88
V+++ GASRGIG A+ L + R+ + + L + LD+
Sbjct: 4 VAVITGASRGIGEAIARALARDGYA--LALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
+ ++E +K + E++G +++++ +G+ + L E+ M EVN +G
Sbjct: 62 SKAESVEEFSKKVLERFGDVDVVVANAGL----GYFKRLEEL-SEEEFHEM--IEVNLLG 114
Query: 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
+K LK G + S + + Y ++K A
Sbjct: 115 VWRTLKAFLDSLKRTGGLA------LVTTS----DVSARLIPYGGGYVSTKWAAR 159
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 2e-10
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 35/173 (20%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
L+ GA+ G+G FA+ L KG ++ + R A L +L R L DL
Sbjct: 4 LITGATGGLGGAFARAL-----KGHDLLLSGRR---AGALAELAREVGAR--ALPADLAD 53
Query: 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
E +A E+ G L+LL++A G + ++ E + VE+ ML + +
Sbjct: 54 ELEAKALL----EEAGPLDLLVHAVGK-AGRASVR-EAGRDLVEE---ML--AAHLLTAA 102
Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
V+KH + A A + + G+ +Y A+K AL
Sbjct: 103 FVLKHA----------RFQKGARAVFFGAYPRYVQ---VPGFAAYAAAKGALE 142
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+G +V G ++GIG A G +A + + DL ++ +
Sbjct: 9 QGRSVVVTGGTKGIGRGIATVFARA---GANVAVAGRSTADIDACVADLDQLGSGKVIGV 65
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
Q D++ + +A A E++G ++++ +G+ P+ L + L + V
Sbjct: 66 QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-------PDAPLATMTPEQLNGIFAV 118
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N G ++ L G+G V S+ G I GW Y A+KAA
Sbjct: 119 NVNGTFYAVQACLDALIASGSG------RVVLTSSITGPITGYP--GWSHYGATKAAQ 168
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 3e-10
Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 30/178 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V ++ A++GIG A +G VIAT N + L LDV
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAR---EGAKVIATDINESKLQELEKYPGIQTRVLDV-- 59
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
T + + L++L N +G + VL E + +
Sbjct: 60 -------TKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFS--------MNL 104
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N L+IK P + +G ++ N+S+ S+ Y +KAA+
Sbjct: 105 NVRSMYLMIKAFLPKMLAQKSG-----NII-NMSSVASSVKGVV--NRCVYSTTKAAV 154
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-10
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G ++LV G SRGIG A+ LLE G V R+ + + + +
Sbjct: 28 AGRIALVTGGSRGIGQMIAQGLLE---AGARVFICARDAEACADTATRLSAYGDCQ-AIP 83
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
DL+ E+ A+++ E L++L+N +G P + KV ++
Sbjct: 84 ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKV--------MQL 135
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N I+ + PLL+ + + A V N+ + G + +Y SKAAL+
Sbjct: 136 NVTSVFSCIQQLLPLLRRSAS--AENPARVINIGSVAGISA-MGEQAY-AYGPSKAALHQ 191
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 27/184 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G +L+ GAS GIG + A E G V R+ + + D + ++
Sbjct: 31 SGKRALITGASTGIGKKVALAYAE---AGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
D+T + + + G +++ + +GI + P ++ +
Sbjct: 88 CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRI--------QDT 139
Query: 145 NAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
N G L + M + G G ++ ++ G I N Y SKA
Sbjct: 140 NVTGVFLTAQAAARAM---VDQGLGG-----TII-TTASMSGHII-NIPQQVSHYCTSKA 189
Query: 201 ALNH 204
A+ H
Sbjct: 190 AVVH 193
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+ V+LV GA RGIG E AK L + VI R ++D F
Sbjct: 43 ENKVALVTGAGRGIGREIAKMLAKS---VSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D++ + I I ++ ++++L+N +GI
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGI 131
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +LV GA+ GIG A+ + V + ++ + + V
Sbjct: 26 TGRKALVTGATGGIGEAIARCFHAQGAI--VGLHGTREDKLK---EIAADLGKDVFVFSA 80
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+L+ +I+ A+ + + +++L+N +GI
Sbjct: 81 NLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 3e-10
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+ LV GA+ G G ++ +++ K VIAT R L +LK+ + L + QLD+
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHK--VIATGRR---QERLQELKDELGDNLYIAQLDVR 56
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLAYEV 144
+ IE S+ ++ ++++L+N +G L++ + K+S+ M +
Sbjct: 57 NRAAIEEMLASLPAEWCNIDILVNNAG-LALG--------MEPAHKASVEDWETM--IDT 105
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAA 201
N G + + + + P + +ER+ + N +GS G G + Y A+KA
Sbjct: 106 NNKGLVYMTRAVLPGM------VERNHGHIIN----IGSTAGSWPYAGGNVYGATKAF 153
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 30/185 (16%)
Query: 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPE 79
+ ++ G V +V G RGIG + + + V+ ++ +G L L
Sbjct: 2 ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQELPGAVFI 59
Query: 80 RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKS 136
DV T E ++ ++G L+ ++N +G P + ET+ ++
Sbjct: 60 LCDV-----TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQL--- 110
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
E+N +G + K P L+ G V+ N+S+ VG+IG Y
Sbjct: 111 -----LELNLLGTYTLTKLALPYLRKSQ-G-----NVI-NISSLVGAIGQ---AQAVPYV 155
Query: 197 ASKAA 201
A+K A
Sbjct: 156 ATKGA 160
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 4e-10
Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 25/180 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V+L+ G + G+G + + + + V ++ +L+ +
Sbjct: 4 TGEVALITGGASGLGRALVDRFVAEGAR--VAVLDKSAERLR---ELEVAHGGNAVGVVG 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE--- 143
D+ + +A+ +G ++ LI +GI T L + + + A++
Sbjct: 59 DVRSLQDQKRAAERCLAAFGKIDTLIPNAGI------WDYSTALADLPEDKIDAAFDDIF 112
Query: 144 -VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VN G I +K P L + + G + GG Y A+K A+
Sbjct: 113 HVNVKGYIHAVKACLPALVSSRGSV-------VFTISNAGFYPN---GGGPLYTATKHAV 162
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 57.1 bits (139), Expect = 4e-10
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 23/181 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+ V+LV ++ GIGL A++L + G V+ + R + +
Sbjct: 13 ENKVALVTASTDGIGLAIARRLAQ---DGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYE 143
+ E +G +++L++ + + + E +K+
Sbjct: 70 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKI--------LH 121
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
VN +L+ K + P ++ G G V +S+ LG Y SK AL
Sbjct: 122 VNVKATVLMTKAVVPEMEKRGGG------SVLIVSSVGAYHPFPNLG---PYNVSKTALL 172
Query: 204 H 204
Sbjct: 173 G 173
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 4e-10
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G V+L+ GA G G AK+ + K V+ R+ GA + + +
Sbjct: 8 EGKVALITGAGSGFGEGMAKRFAKGGAK--VVIVDRDKAGAERVAG---EIGDAALAVAA 62
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
D++ E+ ++A+ ++ K+G +++L+N +GI +++
Sbjct: 63 DISKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELVEPEEFDRI--------VG 113
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
VN G L+ + P K G + V + N+++ Y A+K +
Sbjct: 114 VNVRGVYLMTSKLIPHFKENGAKGQECVIL--NVASTGAGRPR---PNLAWYNATKGWVV 168
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 5e-10
Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 31/187 (16%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
G ++ G+S GIG + FAK+ G V T RN +
Sbjct: 25 SGKSVIITGSSNGIGRSAAVIFAKE-------GAQVTITGRNEDRLEETKQQILKAGVPA 77
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
E+++ + D+T S + + K+G +++L+N +G + + +K
Sbjct: 78 EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK--T 135
Query: 139 MLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRA 197
++N I + + L+K G +V N+S+ V + G+ Y
Sbjct: 136 F---KLNFQAVIEMTQKTKEHLIKTKG-------EIV-NVSSIVAGPQAHS--GYPYYAC 182
Query: 198 SKAALNH 204
+KAAL+
Sbjct: 183 AKAALDQ 189
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 56.7 bits (138), Expect = 5e-10
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQL 86
V++V GAS G GL A + L + D+ V A + + + +++ ++
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDR--VAALDLSAETLEETARTHWHAYADKVLRVRA 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTL---NKVEKSSLMLA 141
D+ E + A+ + E++G++++L+N +GI + + T + +KV
Sbjct: 60 DVADEGDVNAAIAATMEQFGAIDVLVNNAGI-TGNSEAGVLHTTPVEQFDKV-------- 110
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
VN G L + + P + + G G +V N+++ + G +Y SK A
Sbjct: 111 MAVNVRGIFLGCRAVLPHMLLQGAG-----VIV-NIASVASLVAF---PGRSAYTTSKGA 161
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 5e-10
Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 38/185 (20%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
++ GA+ G+G A++L + VI R+ +++V +L
Sbjct: 15 AQRTVVITGANSGLGAVTARELARRGAT--VIMAVRDTRKGE---AAARTMAGQVEVREL 69
Query: 87 DLTVESTIEASAKSIK---EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
DL S++ + ++LIN +GI+++P T++ E +
Sbjct: 70 DL-------QDLSSVRRFADGVSGADVLINNAGIMAVP----YALTVDGFE---SQIG-- 113
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-------GDNRLGGWHSYR 196
N +G + + P L +R V V++++ G I R W +Y
Sbjct: 114 TNHLGHFALTNLLLPRLT------DR-VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYS 166
Query: 197 ASKAA 201
SK A
Sbjct: 167 QSKLA 171
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 5e-10
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 24/178 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G L+ GASRGIG A+ L K + V R+ L L L L
Sbjct: 4 MKGAVLITGASRGIGEATARLLHAKGYR--VGLMARD---EKRLQALAAELEGAL-PLPG 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+ E + +++E +G L+ L+N +G+ V++P L +E+ L+ + N
Sbjct: 58 DVREEGDWARAVAAMEEAFGELSALVNNAGVG----VMKPVHEL-TLEEWRLV--LDTNL 110
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
G L I+H P L + R + N VGS+ G N G +Y ASK L
Sbjct: 111 TGAFLGIRHAVPAL------LRRGGGTIVN----VGSLAGKNPFKGGAAYNASKFGLL 158
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 6e-10
Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 26/185 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
+G + G SRGIGL AK++ G V ++ L + ++
Sbjct: 8 RGKTMFISGGSRGIGLAIAKRVAAD---GANVALVAKSAEPHPKLPGTIYTAAKEIEEAG 64
Query: 83 ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
+ D+ + A+ E++G +++ +N + +++ ++ E L + + L
Sbjct: 65 GQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIE--EVPLKRFD---L 119
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
M + G V + P +K + LS + Y +
Sbjct: 120 MNG--IQVRGTYAVSQSCIPHMKGRDNP------HILTLSPPIRLEPKWL--RPTPYMMA 169
Query: 199 KAALN 203
K +
Sbjct: 170 KYGMT 174
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-10
Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
G V+++ G+S GIGL A+ + +G ++ R + LK +F R+ +
Sbjct: 6 SGKVAVITGSSSGIGLAIAEGFAK---EGAHIVLVARQVDRLHEAARSLKEKFGVRVLEV 62
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+D+ ++A +S++ +G ++L+N +G T+ + +E+
Sbjct: 63 AVDVATPEGVDAVVESVRSSFGGADILVNNAGT-------GSNETIMEAADEKWQFYWEL 115
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ + + + + P ++ G G + + ++ L Y +KAAL
Sbjct: 116 LVMAAVRLARGLVPGMRARGGG------AIIHNASICAVQP---LWYEPIYNVTKAAL 164
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 6e-10
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 23/180 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G +++ GA GIG E A G V+ + N + A ++D + + +
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFAT---AGASVVVSDINADAANHVVDEIQQLGGQAFACR 66
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
D+T E + A A K G +++L+N +G P P + YE+
Sbjct: 67 CDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRA--------YEL 117
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N + + ++P ++ G G V+ +++ + SY +SKAA +H
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGG------VILTITSMAAENKN---INMTSYASSKAAASH 168
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 7e-10
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 23/188 (12%)
Query: 18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKN 75
+ S+ V++V GASRGIG A +L G VI A +
Sbjct: 17 NLYFQSMMETNKVAIVTGASRGIGAAIAARLAS---DGFTVVINYAGKAAAAEEVAGKIE 73
Query: 76 RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK 135
+ Q D++ + + + +E +G +++L+N +GI+ + + ET ++
Sbjct: 74 AAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIA--ETGDAVFDR 131
Query: 136 SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSY 195
++A VN G ++ + L+VGG I N+S + + Y
Sbjct: 132 ---VIA--VNLKGTFNTLREAAQRLRVGGRII--------NMSTSQVGLL---HPSYGIY 175
Query: 196 RASKAALN 203
A+KA +
Sbjct: 176 AAAKAGVE 183
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 7e-10
Identities = 20/180 (11%), Positives = 51/180 (28%), Gaps = 31/180 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +V G +G + + V+ + N + ++
Sbjct: 2 SSGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQ----------ADSNILVDG 49
Query: 87 DLTVESTIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ ++ + + ++ + +G + + + + + M+
Sbjct: 50 NKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASS-KDFVKNADL---MIK--Q 103
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ + K + LK GG A + G Y +KAA++H
Sbjct: 104 SVWSSAIAAKLATTHLKPGGLLQ--------LTGAAAAMGPTPSMIG---YGMAKAAVHH 152
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 7e-10
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 21/180 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
+G +LV G SRGIG ++L G + TC RN L +++
Sbjct: 8 EGCTALVTGGSRGIGYGIVEELAS---LGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64
Query: 86 LDLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
DL+ S + ++ + G LN+L+N +GI + + + S +M +
Sbjct: 65 CDLSSRSERQELMNTVANHFHGKLNILVNNAGI----VIYKEAKDYTVEDYSLIM---SI 117
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N + P LK G V +S+ G++ Y A+K A++
Sbjct: 118 NFEAAYHLSVLAHPFLKASERG------NVVFISSVSGALAVPYEA---VYGATKGAMDQ 168
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 8e-10
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V++V GASRGIG A +L + G VI T GA G+ +
Sbjct: 27 DKQVAIVTGASRGIGRAIALELARR---GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
L++ + ++A +S +++G+LN+L+N +GI
Sbjct: 84 LNVNDATAVDALVESTLKEFGALNVLVNNAGI 115
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 9e-10
Identities = 43/178 (24%), Positives = 64/178 (35%), Gaps = 20/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G +++V GAS GIG A + K V+ T RN N L D L
Sbjct: 7 EGKIAIVTGASSGIGRAAALLFAREGAK--VVVTARNGNALAELTDEIAGGGGEAAALAG 64
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEV 144
D+ E+ EA + ++G L+ N +G L + + +
Sbjct: 65 DVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET--------LDT 116
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N L K+ P + G G ++ S+ VG G Y ASKA L
Sbjct: 117 NLTSAFLAAKYQVPAIAALGGG-----SLT-FTSSFVGHTA--GFAGVAPYAASKAGL 166
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 9e-10
Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 25/180 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V LV GA IGL A +L E +G + N
Sbjct: 6 NGKVCLVTGAGGNIGLATALRLAE---EGTAIALLDMNREALEKAEASVREKGVEARSYV 62
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
D+T E + + S+ +G ++ L N +G + +V
Sbjct: 63 CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARV--------L 113
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+N G V+K +S + G +V N ++ G G +Y SK A+
Sbjct: 114 TINVTGAFHVLKAVSRQMITQNYG-----RIV-NTASMAGVKGP---PNMAAYGTSKGAI 164
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 9e-10
Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 33/178 (18%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPERLDVLQ 85
+G V+LV GA+ GIG L GA + D L
Sbjct: 27 EGKVALVTGAAGGIGGAVVTALRAA--------------GARVAVADRAVAGIAADLHLP 72
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
DL + + ++ G L++++N +G++S + + + + V
Sbjct: 73 GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS--------LGV 124
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N P + + PL+ G G A+V N+++ G G Y +KAAL
Sbjct: 125 NVEAPFRICRAAIPLMAAAGGG-----AIV-NVASCWGLRPG---PGHALYCLTKAAL 173
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 9e-10
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 28/184 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
V LV G SRGIG + +G + N A ++ +
Sbjct: 25 DTPVVLVTGGSRGIGAAVCRLAAR---QGWRVGVNYAANREAADAVVAAITESGGEAVAI 81
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSLMLAY 142
D+ + I A ++ ++G L+ L+N +GI+ P + + ++
Sbjct: 82 PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERM--------L 133
Query: 143 EVNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
VN G IL ++ MS L G I N+S+ +G + Y AS
Sbjct: 134 RVNVTGSILCAAEAVRRMSRLYSGQGGAI-------VNVSSMAAILG--SATQYVDYAAS 184
Query: 199 KAAL 202
KAA+
Sbjct: 185 KAAI 188
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-09
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V+LV GA+ GIGLE A++L ++ G V R G L D
Sbjct: 21 DSEVALVTGATSGIGLEIARRLGKE---GLRVFVCARGEEGLRTTLKELREAGVEADGRT 77
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+ IEA ++ E+YG +++L+N +G
Sbjct: 78 CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-09
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVL 84
+V G +RGIGL F + + G +A + + F +
Sbjct: 13 VNKTIIVTGGNRGIGLAFTRAVAA---AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAY 69
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
Q D++ + + + I G ++ LI +G+
Sbjct: 70 QCDVSNTDIVTKTIQQIDADLGPISGLIANAGV 102
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-09
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
+G VSLV G++RGIG A++L G VI T + A + + + N++ + +
Sbjct: 6 QGKVSLVTGSTRGIGRAIAEKLASA---GSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+++L E +I + + I +++L+N +GI
Sbjct: 63 EMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 1e-09
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+G V+LV GASRGIG A+ L E+ G VI T + +GA + + + +
Sbjct: 8 EGKVALVTGASRGIGKAIAELLAER---GAKVIGTATSESGAQ---AISDYLGDNGKGMA 61
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
L++T +IEA K+I +++G +++L+N +GI
Sbjct: 62 LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-09
Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 22/188 (11%)
Query: 17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLK 74
+ + AS G V+L GA RGIG A +L +G V+ + A ++
Sbjct: 10 SGPSDASKPLAGKVALTTGAGRGIGRGIAIELGR---RGASVVVNYGSSSKAAEEVVAEL 66
Query: 75 NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
+ + +Q D++ S + A +G L+ +++ SG+ + L E T +
Sbjct: 67 KKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL--EVTQELFD 124
Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
K + +N G V + + GG I S+ +
Sbjct: 125 K-----VFNLNTRGQFFVAQQGLKHCRRGGRII--------LTSSIAAVMTGI--PNHAL 169
Query: 195 YRASKAAL 202
Y SKAA+
Sbjct: 170 YAGSKAAV 177
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 1e-09
Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCR-NPNGATGLLDLKNRFPERLDVL 84
++ V G GIG ++L + G V+A C N L+ +
Sbjct: 12 SQRIAYVTGGMGGIGTSICQRLHKD---GFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS 68
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ ++ + + + +K + G +++L+N +GI
Sbjct: 69 EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 1e-09
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 14 VAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73
+ T++ A + LV G +RGIGL A++L K V T R GL
Sbjct: 1 MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPKGLF-- 56
Query: 74 KNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+++D+T ++ + +++E G + +L++ +G+
Sbjct: 57 ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-09
Identities = 24/173 (13%), Positives = 56/173 (32%), Gaps = 42/173 (24%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
L+ GAS +G ++L +K + VI R+ + +D+T
Sbjct: 7 LLIGASGTLGSAVKERLEKKAE---VITAGRHS-----------------GDVTVDITNI 46
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+I+ E+ G ++ +++A+G + + L ++ + G I
Sbjct: 47 DSIKKMY----EQVGKVDAIVSATGSATF-------SPLTELTPEKNAVTISSKLGGQIN 95
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
++ L G+ + + + S + A+
Sbjct: 96 LVLLGIDSLNDKGSFT--------LTTGIMMEDP---IVQGASAAMANGAVTA 137
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-09
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 27/173 (15%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+ ++ GAS G+G E AK + T R+ + L + N + DL
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKA--TYLTGRS---ESKLSTVTNCLSNNVGYRARDLA 57
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+E + + + +++++G + E +++ ++ E N
Sbjct: 58 SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQ--EQDPEQIQT---LI--ENNLSSA 107
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAA 201
I V++ + K ++ V VV + S +Y A K A
Sbjct: 108 INVLRELVKRYK------DQPVNVV-M----IMSTAAQQPKAQESTYCAVKWA 149
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 2e-09
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
KG V+LV GASRGIG A L ++ G V+ N A ++D + +
Sbjct: 3 KGKVALVTGASRGIGRAIAIDLAKQ---GANVVVNYAGNEQKANEVVDEIKKLGSDAIAV 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ D+ + K + +G +++L+N +G+
Sbjct: 60 RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-09
Identities = 39/198 (19%), Positives = 81/198 (40%), Gaps = 36/198 (18%)
Query: 16 FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLK 74
+ A+ + L+ GAS GIG A + LE ++ +I R L +LK
Sbjct: 21 MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR---LEKLEELK 77
Query: 75 NRFPERLD-----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
+ V QLD+T I+ +++ +++ +++L+N +G ++
Sbjct: 78 KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALG-------- 128
Query: 130 LNKVEKSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184
++V + + + ++ N I + + + P+ + ++ + N +GSI
Sbjct: 129 SDRVGQIATEDIQDV--FDTNVTALINITQAVLPIFQ------AKNSGDIVN----LGSI 176
Query: 185 -GDNRLGGWHSYRASKAA 201
G + Y ASK A
Sbjct: 177 AGRDAYPTGSIYCASKFA 194
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 2e-09
Identities = 39/184 (21%), Positives = 65/184 (35%), Gaps = 24/184 (13%)
Query: 27 KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLL-DLKNRFPERL 81
KG V +V GAS +G+G+E A+ E G I GA + +L+ + +
Sbjct: 19 KGKVVVVTGASGPKGMGIEAARGCAEM---GAAVAITYASRAQGAEENVKELEKTYGIKA 75
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLML 140
+ + + E K + +G ++ I +G + N V
Sbjct: 76 KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHV------- 128
Query: 141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
+V+ G K + K GTG + ++ G I N SY +KA
Sbjct: 129 -VQVDLNGTFHCAKAVGHHFKERGTG------SLVITASMSGHIA-NFPQEQTSYNVAKA 180
Query: 201 ALNH 204
H
Sbjct: 181 GCIH 184
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-09
Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 27/184 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
K V +V GAS G+G + L ++ G + P + +
Sbjct: 6 KSRVFIVTGASSGLGAAVTRMLAQE---GATVLGLDLKPPAGE---EPAAELGAAVRFRN 59
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML---AY 142
D+T E+ A+ K+++G ++ L+N +G E L + +L
Sbjct: 60 ADVTNEADATAALAFAKQEFGHVHGLVNCAGT------APGEKILGRSGPHALDSFARTV 113
Query: 143 EVNAVGPILVIKHMSPL---LKVGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRAS 198
VN +G +I+ + + + G ER V V A+++A G IG +Y AS
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADG-ERGVIVNTASIAAFDGQIGQA------AYAAS 166
Query: 199 KAAL 202
K +
Sbjct: 167 KGGV 170
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 2e-09
Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 28/184 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
G +L+ GA++GIG + A+ G V++ L +F + +
Sbjct: 19 DGKRALITGATKGIGADIARAFAA---AGARLVLSGRDVSELDAARRALGEQFGTDVHTV 75
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLA 141
+DL A+ E +G L++L+N +GI +T +
Sbjct: 76 AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGI--SHPQPVVDTDPQLFDAT-------- 125
Query: 142 YEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
VN P L+ + ++ G G A++ +++ +Y SKA
Sbjct: 126 IAVNLRAPALLASAVGKAMVAAGEGG-----AII-TVASAAALAPLPDHY---AYCTSKA 176
Query: 201 ALNH 204
L
Sbjct: 177 GLVM 180
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 2e-09
Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 33/184 (17%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPER 80
+V GA R IG + FA++ G V+ GA + +
Sbjct: 7 TNRTIVVAGAGRDIGRACAIRFAQE-------GANVVLTYNGAAEGAATAVAEIEKLGRS 59
Query: 81 LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSL 138
++ DLT + +EA+ + +K+G ++ L++ +G L + E ++V
Sbjct: 60 ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQV----- 114
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
+VN L K P + GG + S++ G G G +Y S
Sbjct: 115 ---LDVNLTSLFLTAKTALPKMAKGGAIV--------TFSSQAGRDGGG--PGALAYATS 161
Query: 199 KAAL 202
K A+
Sbjct: 162 KGAV 165
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-09
Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 16/185 (8%)
Query: 17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
++ S++ + + V+++ G + GIG AK + K V+ + + +
Sbjct: 5 STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS 62
Query: 77 FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
V D+T + + + K+G L+++ G+LS E ++
Sbjct: 63 PDVISFV-HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR- 120
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
+M ++N G LV KH + ++ G ++V ++ G H Y
Sbjct: 121 -VM---DINVYGAFLVAKHAARVMIPAKKG-----SIV-FTASISSFTA--GEGVSHVYT 168
Query: 197 ASKAA 201
A+K A
Sbjct: 169 ATKHA 173
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-09
Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 22/179 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
+++ G++ GIGL A+ L + G V+ P+ + D + +
Sbjct: 24 MTKTAVITGSTSGIGLAIARTLAK---AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
D+T S I + +++G ++L+N +G+ + + VE+ ++A
Sbjct: 81 HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED-----FPVEQWDRIIA-- 133
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VN I+ P +K G G ++ N+++ G + +Y A+K +
Sbjct: 134 VNLSSSFHTIRGAIPPMKKKGWG-----RII-NIASAHGLVAS---PFKSAYVAAKHGI 183
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-09
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATC-RNPNGATGLLDLKNRFPERLDVL 84
V+ V G G+G +++L + G V + + + L +
Sbjct: 24 AKRVAFVTGGMGGLGAAISRRLHDA---GMAVAVSHSERNDHVSTWLMHERDAGRDFKAY 80
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+D+ + E A+ + +G +++LIN +GI
Sbjct: 81 AVDVADFESCERCAEKVLADFGKVDVLINNAGI 113
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 3e-09
Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 21/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K V +V GA GIG AK+ + V+A + ++ + + ++
Sbjct: 6 KNKVVIVTGAGSGIGRAIAKKFALNDSI--VVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEV 144
D++ + +E + E Y +++L N +GI+ + + +V V
Sbjct: 64 DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV--------LAV 115
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N + + P++ G G +V N ++ G G Y +K L
Sbjct: 116 NLYSAFYSSRAVIPIMLKQGKG-----VIV-NTASIAGIRGG---FAGAPYTVAKHGL 164
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 54.4 bits (132), Expect = 3e-09
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+LV GASRGIG A QL E+ G + + A +++ +
Sbjct: 3 MTKSALVTGASRGIGRSIALQLAEE---GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
Q ++ ++A K + ++GSL++L+N +GI
Sbjct: 60 QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 54.4 bits (132), Expect = 3e-09
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDVLQL 86
+L+ GASRGIG A +L E G I +N A + + + R + VL
Sbjct: 3 KALITGASRGIGRAIALRLAED---GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGA 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+L A E G L+ L+N +GI
Sbjct: 60 NLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-09
Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 16/178 (8%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVL- 84
G + V G + G+G+ +QLL +GC +A + L +V+
Sbjct: 7 AGRTAFVTGGANGVGIGLVRQLLN---QGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 85 -QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
QLD+ + +A ++ ++G +++L N +G+ + E++ + +
Sbjct: 64 VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIE--ESSYDDWDW-----LLG 116
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
VN G + + P + E+ V N ++ + G Y +K A
Sbjct: 117 VNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG---IYNTTKFA 171
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-09
Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 18/176 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+++V GA G+G A L V R L + + +
Sbjct: 27 GKKIAIVTGAGSGVGRAVAVALAGAGYG--VALAGRR---LDALQETAAEIGDDALCVPT 81
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T ++ A + EK+G +++L N +G P + + T + ++ ++ N
Sbjct: 82 DVTDPDSVRALFTATVEKFGRVDVLFNNAGT-GAPAIPMEDLTFAQWKQ---VVD--TNL 135
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
GP L + ++K R + N + + Y A+K A+
Sbjct: 136 TGPFLCTQEAFRVMKAQEPRGGRII----NNGSISATSPR---PYSAPYTATKHAI 184
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-09
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+ + V G S GIGL A+ L + G V R+ + +D +D
Sbjct: 23 RPQTAFVTGVSSGIGLAVARTLAAR---GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+T + A+ + E++G + +L+N++G
Sbjct: 80 CDVTSTDEVHAAVAAAVERFGPIGILVNSAGR 111
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-09
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
++LV GASRGIG A +L G + + A ++ +
Sbjct: 27 TDRIALVTGASRGIGRAIALELAAA---GAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ D++ ES +EA ++ E++G L++L+N +GI
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 4e-09
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 19/177 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V++V GASRGIG A++L G V+ T R+ + +
Sbjct: 28 SGQVAVVTGASRGIGAAIARKLGS---LGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
DL+ I A A + +G ++L+N +G+ L K + ++ VN
Sbjct: 85 CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL----HTMKPAEWDALI--AVN 138
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
P L+++ +P + G + N+S+ G +Y ASK L
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRG------HIINISSLAGKNPV---ADGAAYTASKWGL 186
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 4e-09
Identities = 28/177 (15%), Positives = 65/177 (36%), Gaps = 20/177 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
V ++ G +G A++ E +G ++ R + R +
Sbjct: 10 TDKVVVISGVGPALGTTLARRCAE---QGADLVLAARTVERLEDVAKQVTDTGRRALSVG 66
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D+T ++ + + YG ++++IN + + TT + A E+
Sbjct: 67 TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVP-SMKPFANTTFEHMRD-----AIELT 120
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G + +I+ +P L+ + N+++ V + +Y+ +K+AL
Sbjct: 121 VFGALRLIQGFTPALEESKGAV-------VNVNSMVVRHSQ---AKYGAYKMAKSAL 167
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 4e-09
Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 32/178 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V GA +GIG A +E G V +
Sbjct: 6 SGKNVWVTGAGKGIGYATALAFVEA---GAKVTGFDQAFTQEQY----------PFATEV 52
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
+D+ + + + + + L+ L+NA+GIL + Q + + + V
Sbjct: 53 MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQT--------FAV 104
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N G + + + G A+V +++ G +Y ASKAAL
Sbjct: 105 NVGGAFNLFQQTMNQFRRQRGG-----AIV-TVASDAAHTPR---IGMSAYGASKAAL 153
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-09
Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 15/180 (8%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G V +V GASRGIG A QL + G V T R+ + + + +
Sbjct: 4 NGQVCVVTGASRGIGRGIALQLCK---AGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60
Query: 86 LDLTVESTIEASAKSI-KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D + ES + + + + +E+ G L++L+N + + + S V
Sbjct: 61 CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G + + L+ G G ++ +S S G + Y KAA +
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQG------LIVVIS----SPGSLQYMFNVPYGVGKAACDK 170
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 4e-09
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
V +V GASRGIG A L + GC ++ R+ A + + + D
Sbjct: 3 VVVVTGASRGIGKAIALSLGKA---GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGD 59
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGI 117
++ E+ +EA K+ + +G++++++N +GI
Sbjct: 60 VSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 5e-09
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
KG ++V G+SRG+G A +L G V+ + + V
Sbjct: 4 KGKTAIVTGSSRGLGKAIAWKLGNM---GANIVLNGSPASTSLDATAEEFKAAGINVVVA 60
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ D+ +E K+ + +G +++L+N +GI
Sbjct: 61 KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 5e-09
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 10 SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
S SS LV G +RGIGL A+ + DK V T R+ G
Sbjct: 3 SSHHHHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDK--VAITYRSGEPPEG 60
Query: 70 LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
L ++ D+T +E + K I+E +G + +LI +G+
Sbjct: 61 FL-----------AVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-09
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLL-DLKNRFPERLDVL 84
LV G ++GIG A G V R+P + + +L + +
Sbjct: 40 SARSVLVTGGTKGIGRGIATVFARA---GANVAVAARSPRELSSVTAELGELGAGNVIGV 96
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+LD++ + +A+++ + +G+L+++ +GI
Sbjct: 97 RLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-09
Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 18/178 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+G ++LV G G+G A+ L +G VI R ++ R + +
Sbjct: 32 EGRIALVTGGGTGVGRGIAQALSA---EGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAV 88
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D+ + A +++ ++ L+LL+N +G ++P V E T + ++A
Sbjct: 89 VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS-NVPPVPLEEVTFEQWNG---IVA--A 142
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N G L +H ++K R + N + Y A+K A+
Sbjct: 143 NLTGAFLCTQHAFRMMKAQTPRGGRII----NNGSISAQTPR---PNSAPYTATKHAI 193
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 6e-09
Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 24/193 (12%)
Query: 14 VAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLL 71
V S + G V+LV G+ RGIG A L G + + A ++
Sbjct: 4 VENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRL---GAKVVVNYANSTKDAEKVV 60
Query: 72 DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTL 130
++ D+ I +G L++ ++ SG++S ++ E
Sbjct: 61 SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF 120
Query: 131 NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG 190
++V + +N G V + L GG + S+
Sbjct: 121 DRV--------FSLNTRGQFFVAREAYRHLTEGGRIV--------LTSSNTSKDFSV--P 162
Query: 191 GWHSYRASKAALN 203
Y SK A++
Sbjct: 163 KHSLYSGSKGAVD 175
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 1e-08
Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 29/194 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA----TCRNPNGATGLLDLKNRFPERLD 82
K V ++ G + +G AK + + ++ + A L D ++
Sbjct: 10 KNKVIVIAGGIKNLGALTAKTFAL---ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA 66
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
+ Q DL+ E + ++++G +++ IN G + ++ ET+ + + M
Sbjct: 67 LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIV--ETSEAEFDA---MDT- 120
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+N IK + + G I ++ + + G + +Y +KA +
Sbjct: 121 -INNKVAYFFIKQAAKHMNPNGHII--------TIATSLLAAY---TGFYSTYAGNKAPV 168
Query: 203 NHDKICVSGVWSKE 216
H + SKE
Sbjct: 169 EH----YTRAASKE 178
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-08
Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 19/177 (10%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
V++V G ++GIG +++L V + A + L ++ + LD
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNA 146
+T ++ +++ EK G ++L+N +GI I +L+ E L ++ Y VN
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQI--------YSVNV 113
Query: 147 VGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
I+ S ++G G + N ++ G L +Y +K A+
Sbjct: 114 FSVFFGIQAASRKFDELGVKG------KIINAASIAAIQGFPILS---AYSTTKFAV 161
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-08
Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 19/176 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G ++V G + GIGL A + +G ++ + + ++ +
Sbjct: 30 DGRAAVVTGGASGIGLATATEFAR---RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D+ + A G ++++ + +GI+ + + + +++
Sbjct: 87 CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLA--QMNHDDWRW-----VIDID 139
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
G I ++ P L GTG +A ++ G + + LG +Y +K
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTG-----GHIAFTASFAGLVPNAGLG---TYGVAKYG 187
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-08
Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 35/204 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
V+LV GA++ +G A+ L +G + R+ A L L R P
Sbjct: 8 TVPVALVTGAAKRLGRSIAEGLHA---EGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64
Query: 84 LQLDL-----------------TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-- 124
+Q DL T+ + + +G ++L+N + P L
Sbjct: 65 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 123
Query: 125 ------QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
+P + +++ + NA+ P +IK + + + N+
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183
Query: 179 ARVGSIGDNRLGGWHSYRASKAAL 202
+ + L G+ Y +K AL
Sbjct: 184 DAMTNQP---LLGYTIYTMAKGAL 204
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-08
Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 35/204 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
V+LV GA++ +G A+ L +G + R+ A L L R P
Sbjct: 45 TVPVALVTGAAKRLGRSIAEGLHA---EGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101
Query: 84 LQLDLTVEST-----------------IEASAKSIKEKYGSLNLLINASGILSIPNVL-- 124
+Q DL+ +T + +G ++L+N + P L
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 160
Query: 125 ------QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
+P + +++ + NA+ P +IK + + + N+
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220
Query: 179 ARVGSIGDNRLGGWHSYRASKAAL 202
+ + L G+ Y +K AL
Sbjct: 221 DAMTNQP---LLGYTIYTMAKGAL 241
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-08
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+ V+ + G GIG A+ + GC VIA+ P T L R L
Sbjct: 26 RDKVAFITGGGSGIGFRIAEIFMR---HGCHTVIASRSLPRVLTAARKLAGATGRRCLPL 82
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+D+ + A+ +++G +++LIN + N L P L+ ++M ++
Sbjct: 83 SMDVRAPPAVMAAVDQALKEFGRIDILINCAAG----NFLCPAGALSFNAFKTVM---DI 135
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ G V + + G V+ N++A +G+ G ++KAA+
Sbjct: 136 DTSGTFNVSRVLYEKFFRDHGG------VIVNITATLGNRG---QALQVHAGSAKAAV 184
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-08
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRF 77
S +G V+LV GA RGIG E A +L + GC ++ + A ++ +
Sbjct: 21 GPQSASLEGKVALVTGAGRGIGREMAMELGRR---GCKVIVNYANSTESAEEVVAAIKKN 77
Query: 78 PERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSS 137
++ ++ V I + + +G L+++ + SG++S +V + T + ++
Sbjct: 78 GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK--DVTPEEFDR-- 133
Query: 138 LMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRA 197
+ +N G V + L++GG I + + G Y
Sbjct: 134 -VFT--INTRGQFFVAREAYKHLEIGGRLI--------LMGSITGQAKAV--PKHAVYSG 180
Query: 198 SKAALN 203
SK A+
Sbjct: 181 SKGAIE 186
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-08
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 22/179 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
KG V++V G++ GIGL A L +G V+ + + L + ++
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAA---QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLY 59
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
DL+ + + + G +++L+N +GI + EK +LA
Sbjct: 60 DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED-----FPTEKWDAILA-- 112
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+N P +K G G + N+++ G + +Y A+K +
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGLVAS---ANKSAYVAAKHGV 162
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-08
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+ V ++ GAS+GIG + ++ V+AT R+ + + +
Sbjct: 27 QQKVVVITGASQGIGAGLVRAYRDR---NYRVVATSRSIKPSAD---------PDIHTVA 74
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D++ T + + E++G ++ L+N +G+
Sbjct: 75 GDISKPETADRIVREGIERFGRIDSLVNNAGV 106
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-08
Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 30/181 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G ++V G S+GIG A+ L + G V + A + ++
Sbjct: 11 SGRKAIVTGGSKGIGAAIARALDK---AGATVAIADLDVMAAQ---AVVAGLENGGFAVE 64
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+D+T ++++A+ + + G +LL +G+ + ++VN
Sbjct: 65 VDVTKRASVDAAMQKAIDALGGFDLLCANAGVS-------TMRPAVDITDEEWDFNFDVN 117
Query: 146 AVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
A G L +H L G V+ N ++ +G L Y ASK A
Sbjct: 118 ARGVFLANQIACRHF---LASNTKG------VIVNTASLAAKVGAPLLA---HYSASKFA 165
Query: 202 L 202
+
Sbjct: 166 V 166
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 3e-08
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G SL+ GAS GIG A+ L + K VI + N L N + +
Sbjct: 13 TGKTSLITGASSGIGSAIARLLHKLGSK--VIISGSNEEKLK---SLGNALKDNYTIEVC 67
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+L + + K +L++L+ +GI
Sbjct: 68 NLANKEECSN----LISKTSNLDILVCNAGI 94
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 3e-08
Identities = 36/182 (19%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+G V ++ G+S G+G A + + V+ + A +L+ + +
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFAT---EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ D+TVES + +S +++G L+++IN +G+ + + +++ S +
Sbjct: 63 KGDVTVESDVINLVQSAIKEFGKLDVMINNAGL-------ENPVSSHEMSLSDWNKVIDT 115
Query: 145 NAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
N G L IK+ ++ G V N+S+ I + Y ASK
Sbjct: 116 NLTGAFLGSREAIKYF---VENDIKG------TVINMSSVHEKIPW---PLFVHYAASKG 163
Query: 201 AL 202
+
Sbjct: 164 GM 165
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 4e-08
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVL 84
V++V G RGIGL A+ L G IA + G ++ + R+ L
Sbjct: 28 ARPVAIVTGGRRGIGLGIARALAA---SGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ DL S+ +A+ ++ ++G ++ L+N +GI
Sbjct: 85 RADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 4e-08
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 26/179 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
KG +LV G++ GIGL A+ L G ++ L R +
Sbjct: 3 KGKTALVTGSTSGIGLGIAQVLAR---AGANIVLNGFGDPAPA--LAEIARHGVKAVHHP 57
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLN--KVEKSSLMLAYE 143
DL+ + IEA + ++G +++L+N +GI Q + +E ++A
Sbjct: 58 ADLSDVAQIEALFALAEREFGGVDILVNNAGI-------QHVAPVEQFPLESWDKIIA-- 108
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+N + P ++ G ++ N+++ G +G G +Y A+K +
Sbjct: 109 LNLSAVFHGTRLALPGMRARNWG-----RII-NIASVHGLVGS---TGKAAYVAAKHGV 158
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 4e-08
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G +LV G++RG+G +A+ L G VI +D R +
Sbjct: 8 TGKTALVTGSARGLGFAYAEGLAAA---GARVILNDIRATLLAESVDTLTRKGYDAHGVA 64
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+T E IEA+ + + +++LIN +GI
Sbjct: 65 FDVTDELAIEAAFSKLDAEGIHVDILINNAGI 96
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 5e-08
Identities = 41/193 (21%), Positives = 71/193 (36%), Gaps = 33/193 (17%)
Query: 17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
+S + GA+ G G A++ E ++ T R L L
Sbjct: 10 SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWS--LVLTGRR---EERLQALAGE 64
Query: 77 FPERLDV--LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
+ V L LD+ + + A+ ++ E++ +L LIN +G L++ + +
Sbjct: 65 LSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAG-LALG--------TDPAQ 115
Query: 135 KSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNR 188
L M + N G + + + P L G G A + N +GS+ G
Sbjct: 116 SCDLDDWDTM--VDTNIKGLLYSTRLLLPRLIAHGAG-----ASIVN----LGSVAGKWP 164
Query: 189 LGGWHSYRASKAA 201
G H Y +KA
Sbjct: 165 YPGSHVYGGTKAF 177
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 5e-08
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDL 88
V+LV GA +GIG A +L++ G +A N A + N+ +++D+
Sbjct: 4 VALVTGAGQGIGKAIALRLVK---DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV 60
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNAV 147
+ + A+ + ++ G ++++N +G+ + ++KV Y +N
Sbjct: 61 SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV--------YNINVK 112
Query: 148 GPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
G I I+ K G G + N ++ G +G+ L Y +SK A+
Sbjct: 113 GVIWGIQAAVEAFKKEGHGG------KIINACSQAGHVGNPELA---VYSSSKFAV 159
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-08
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 39/188 (20%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-----NRFPERL 81
+ V++V G + G+GL K+LL+ G + +LD++ +R
Sbjct: 8 RDAVAVVTGGASGLGLATTKRLLD---AGAQVV----------VLDIRGEDVVADLGDRA 54
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML- 140
D+T E+ + + A + E G+L +++N +G L++ SL
Sbjct: 55 RFAAADVTDEAAVAS-ALDLAETMGTLRIVVNCAGT------GNAIRVLSRDGVFSLAAF 107
Query: 141 --AYEVNAVGPILVIK----HMSPLLKVGGTGIERDVAV-VANLSARVGSIGDNRLGGWH 193
++N VG V++ ++ VG ER V + A+++A G IG
Sbjct: 108 RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQA------ 161
Query: 194 SYRASKAA 201
+Y ASK
Sbjct: 162 AYSASKGG 169
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 6e-08
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 26/179 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDV 83
V L+ GAS GIG A++L K ++ R + + +
Sbjct: 3 MDKVILITGASGGIGEGIARELGVAGAK--ILLGARR---QARIEAIATEIRDAGGTALA 57
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
LD+T ++ A A++ + +G +++L+N +G++ L P + KV++ M +
Sbjct: 58 QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP----LSPLAAV-KVDEWERM--ID 110
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAA 201
VN G + I + P++ + + N +GSI + + Y A+K A
Sbjct: 111 VNIKGVLWGIGAVLPIM------EAQRSGQIIN----IGSIGALSVVPTAAVYCATKFA 159
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 6e-08
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNP-NGATGLLDLKNRFPERLDVL 84
+G V+LV G SRG+G A+ L E GC V+ RN + L ++
Sbjct: 20 RGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ D++ ++ +++KEK+G L+ ++NA+GI
Sbjct: 77 RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 7e-08
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 32/195 (16%)
Query: 16 FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDL 73
+ S S+ G + V G SRGIG AK+L + G +A A ++
Sbjct: 19 YFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALE---GAAVALTYVNAAERAQAVVSE 75
Query: 74 KNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKV 133
+ R ++ D IE + + E G L++L+N++GI +
Sbjct: 76 IEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGI----------WHSAPL 125
Query: 134 EKSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188
E++++ ++A VN P + I+ S L GG I + + + +
Sbjct: 126 EETTVADFDEVMA--VNFRAPFVAIRSASRHLGDGGRII--------TIGSNLAELVPW- 174
Query: 189 LGGWHSYRASKAALN 203
G Y ASKAAL
Sbjct: 175 -PGISLYSASKAALA 188
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 7e-08
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
A+A KG V+++ G + G+GL A++L+ + V+ N G +
Sbjct: 4 AAACRSVKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEA----QAKKLGN 58
Query: 80 RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
D+T E ++ + K K+G +++ +N +GI T N + +
Sbjct: 59 NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGI------AVASKTYNLKKGQTHT 112
Query: 140 LAY-----EVNAVGPILVIKHMSPLL--KVGGTGIERDVAV-VANLSARVGSIGDNRLGG 191
L +VN +G VI+ ++ + G +R V + A+++A G +G
Sbjct: 113 LEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA---- 168
Query: 192 WHSYRASKAA 201
+Y ASK
Sbjct: 169 --AYSASKGG 176
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 7e-08
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+L+ ++G+G + ++LL KG + + + + ERL +
Sbjct: 6 FVRHALITAGTKGLGKQVTEKLLA---KGYSVTVTYHSDTTAMETMKETYKDVEERLQFV 62
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
Q D+T + + + +G ++ LIN
Sbjct: 63 QADVTKKEDLHKIVEEAMSHFGKIDFLIN 91
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 8e-08
Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 31/184 (16%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
V+L+ GA GIG L A G V A R + D +
Sbjct: 27 PSPVALITGAGSGIGRATALALAAD-------GVTVGALGRTRTEVEEVADEIVGAGGQA 79
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSL 138
L+ D++ E + + + + K+G L++++ +GI + ++
Sbjct: 80 IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGING-VWAPIDDLKPFEWDET----- 133
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
VN G L + P LK G G A+V +S+ G G +Y A+
Sbjct: 134 ---IAVNLRGTFLTLHLTVPYLKQRGGG-----AIV-VVSSING-TRTFTTPGATAYTAT 183
Query: 199 KAAL 202
KAA
Sbjct: 184 KAAQ 187
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 1e-07
Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+ +LV G+SRG+G A +L E G VI R+ A + + ++ V+
Sbjct: 3 QNKCALVTGSSRGVGKAAAIRLAE---NGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ ++ + I+ + I E +G L++ +N + + ++E++ +
Sbjct: 60 KANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS-------GVLRPVMELEETHWDWTMNI 112
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
NA + + + L++ G G + ++S+ L + + SKAAL
Sbjct: 113 NAKALLFCAQEAAKLMEKNGGG------HIVSISSLGSIRY---LENYTTVGVSKAAL 161
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-07
Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 20/180 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFPERLDVL 84
+G V+ + G G+G L G R + + + ++ ++ +
Sbjct: 25 QGKVAFITGGGTGLGKGMTTLLSS---LGAQCVIASRKMDVLKATAEQISSQTGNKVHAI 81
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
Q D+ ++ + + + G N++IN + N + P L+ ++ ++
Sbjct: 82 QCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG----NFISPTERLSPNAWKTIT---DI 134
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G V + L G A +++ G G ++KA +
Sbjct: 135 VLNGTAFVTLEIGKQLIKAQKG-----AAFLSITTIYAETG---SGFVVPSASAKAGVEA 186
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-07
Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 26/188 (13%)
Query: 15 AFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK 74
+ T + ++ GAS GIG A++ E+ ++ R L L
Sbjct: 3 SMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHP--LLLLARR---VERLKALN 57
Query: 75 NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
Q+D+T + T + + ++ YG + ++N +G++ +L T +
Sbjct: 58 L---PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM----LLGQIDTQ-EAN 109
Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWH 193
+ M ++VN +G + ++ + + R+ + N + SI G
Sbjct: 110 EWQRM--FDVNVLGLLNGMQAVLAPM------KARNCGTIIN----ISSIAGKKTFPDHA 157
Query: 194 SYRASKAA 201
+Y +K A
Sbjct: 158 AYCGTKFA 165
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-07
Identities = 31/180 (17%), Positives = 69/180 (38%), Gaps = 20/180 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
+G ++V G + G+G ++L G VIA G L + R + +
Sbjct: 29 EGASAIVSGGAGGLGEATVRRLHAD---GLGVVIADLAAEKGKA----LADELGNRAEFV 81
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
++T E ++ A+ ++ + ++ G ++Q + + + + + ++
Sbjct: 82 STNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI--DL 139
Query: 145 NAVGPILVIKHMSPLLK--VGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRASKAA 201
G V + ++ + ER V A+++ G IG +Y A+KA
Sbjct: 140 YLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ------TAYAAAKAG 193
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-07
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
K V ++ G S G+G A + + +G + R +FP ++ +Q
Sbjct: 5 KEKVVIITGGSSGMGKGMATRFAK---EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+D+ I+ + I EK+G +++LIN +
Sbjct: 62 MDVRNTDDIQKMIEQIDEKFGRIDILINNAAG 93
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-07
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 30/181 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K ++++ G + GIG A++ +G IA + A R+ ++
Sbjct: 6 KDKLAVITGGANGIGRAIAERFAV---EGADIAIA-DLVPAPEAEAAIRNLGRRVLTVKC 61
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLA 141
D++ +EA K + +G ++L+N +GI L ++ +
Sbjct: 62 DVSQPGDVEAFGKQVISTFGRCDILVNNAGI----------YPLIPFDELTFEQWKKTFE 111
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
+N L+ K P +K G G ++ NL++ + + Y ++KAA
Sbjct: 112 --INVDSGFLMAKAFVPGMKRNGWG-----RII-NLTSTTYWLK-IE--AYTHYISTKAA 160
Query: 202 L 202
Sbjct: 161 N 161
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-07
Identities = 24/183 (13%), Positives = 59/183 (32%), Gaps = 31/183 (16%)
Query: 30 VSLVQGASRGIGLEFAKQLLEK-----NDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
+ L+ GA +GIG A + + + ++ + R + D +
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----M 139
D++ + + I E+YG ++ L+N +G+ + +
Sbjct: 64 TADISDMADVRRLTTHIVERYGHIDCLVNNAGV----------GRFGALSDLTEEDFDYT 113
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
+ N G + + + L++ +G + +++ + Y SK
Sbjct: 114 M--NTNLKGTFFLTQALFALMERQHSG------HIFFITSVAATKAF---RHSSIYCMSK 162
Query: 200 AAL 202
Sbjct: 163 FGQ 165
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-07
Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 23/179 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFP-ERLDV 83
+G +++V S G+G A +L G ++ RN + + ++D+
Sbjct: 6 QGKLAVVTAGSSGLGFASALELAR---NGARLLLFSRNREKLEAAASRIASLVSGAQVDI 62
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
+ D+ I+ + ++ G ++L+ ++G P ++ +Y
Sbjct: 63 VAGDIREPGDIDRLFEKARD-LGGADILVYSTG---GP----RPGRFMELGVEDWDESYR 114
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ A + V + + + G G + + + L + +
Sbjct: 115 LLARSAVWVGRRAAEQMVEKGWG------RMVYIGSVTLLRPWQDLA---LSNIMRLPV 164
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-07
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
+ + G +LV GA++GIG A +L G VI + N GA ++
Sbjct: 1 TERLAGKTALVTGAAQGIGKAIAARLAA---DGATVIVSDINAEGAKAAAA---SIGKKA 54
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ D++ +++A I+ G +++L+N + I
Sbjct: 55 RAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-07
Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 30/186 (16%)
Query: 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
S++++ V +V G+ GIG +A+ L +G V+ N A +
Sbjct: 4 SMRFENKVGIVTGSGGGIGQAYAEALAR---EGAAVVVADINAEAAEAVAKQIVADGGTA 60
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL--- 138
+ +D++ + +A A ++G ++ L+N + I L+ +
Sbjct: 61 ISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAI-------FGGMKLDFLLTIDPEYY 113
Query: 139 --MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
++ VN G + + + + G G + N S+ + N Y
Sbjct: 114 KKFMS--VNLDGALWCTRAVYKKMTKRGGG------AIVNQSSTAAWLYSN------YYG 159
Query: 197 ASKAAL 202
+K +
Sbjct: 160 LAKVGI 165
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-07
Identities = 35/179 (19%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
+G +L+ G++RGIG FA+ + +G +A + A +Q
Sbjct: 7 EGKSALITGSARGIGRAFAEAYVR---EGATVAIADIDIERARQAAA---EIGPAAYAVQ 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
+D+T + +I+A+ + E G L++L+N + + + +++ + K+ + +
Sbjct: 61 MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKL--------FAI 112
Query: 145 NAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
N G + ++ + ++ G G + N++++ G G+ Y A+KAA+
Sbjct: 113 NVAGTLFTLQAAARQMIAQGRGG------KIINMASQAGRRGE---ALVAIYCATKAAV 162
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-07
Identities = 26/178 (14%), Positives = 59/178 (33%), Gaps = 31/178 (17%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
++LV A G + L + G V+ + A R +
Sbjct: 3 IALVTHARHFAGPAAVEALTQ---DGYTVVCHDASFADAA------ERQRFESENPGTIA 53
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGI----LSIPNVLQPETTLNKVEKSSLMLAYEV 144
E E + + +++ +++ I +P E + ++ +E
Sbjct: 54 LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQM--------FEA 105
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
++ PIL+++ L+ G +V+ +++ VG Y ++AA
Sbjct: 106 LSIFPILLLQSAIAPLRAAGGA-----SVI-FITSSVGKKPL---AYNPLYGPARAAT 154
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-07
Identities = 22/178 (12%), Positives = 47/178 (26%), Gaps = 27/178 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+ LV G +G + +N V + N + +
Sbjct: 6 EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEASA-------SVIVKMTDS 56
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
+ A + ++ ++ +G + N ++ + LM +
Sbjct: 57 FTEQADQVTAEVGKL-LGDQKVDAILCVAGGWAGGNAKS-KSLF---KNCDLMWK--QSI 109
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ + LK GG A+ G G Y +K A++
Sbjct: 110 WTSTISSHLATKHLKEGGLLT--------LAGAKAALDGT---PGMIGYGMAKGAVHQ 156
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-07
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 11/93 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
K L+ GA+ GIG + + +G ++A + + +
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAK---EGARLVACDIEEGPLREAAEAVGAH------PV 54
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+D+ +++E G L+ +++ +GI
Sbjct: 55 VMDVADPASVERGFAEALAHLGRLDGVVHYAGI 87
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-07
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 29/190 (15%)
Query: 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIAT-CRNPNGATGLLDLKNRFPE 79
A+ KG V+LV GASRGIG AK+L G V A +
Sbjct: 1 ANSMLKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYGNRKEEAEETVYEIQSNGG 57
Query: 80 RLDVLQLDLTVESTIEASAKSIKEK------YGSLNLLINASGILSIPNVLQPETTLNKV 133
+ +L +EA S+ + ++LIN +GI P ETT
Sbjct: 58 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQFF 115
Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
++ M++ VNA P +I+ L+ I N+S+ I L +
Sbjct: 116 DR---MVS--VNAKAPFFIIQQALSRLRDNSRII--------NISSAATRIS---LPDFI 159
Query: 194 SYRASKAALN 203
+Y +K A+N
Sbjct: 160 AYSMTKGAIN 169
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-07
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G LV GA+ GIG +G ++A R + +
Sbjct: 5 SGKTILVTGAASGIGRAALDLFAR---EGASLVAVDREERLLAEAVA---ALEAEAIAVV 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D++ +EA E++G L+ + + +G+
Sbjct: 59 ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 5e-07
Identities = 41/185 (22%), Positives = 64/185 (34%), Gaps = 33/185 (17%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
G + V GA GIGLE + G +I R L +
Sbjct: 10 DGACAAVTGAGSGIGLEICRAFAA---SGARLILIDREAAALDRAAQELGAA---VAARI 63
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYE 143
D+T + A+A E +++L+N++GI + + T +V
Sbjct: 64 VADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQV--------MA 114
Query: 144 VNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
VN G + M + R + NL + G+I NR SY ASK
Sbjct: 115 VNVDGMFWASRAFGRAM----------VARGAGAIVNLGSMSGTIV-NRPQFASSYMASK 163
Query: 200 AALNH 204
A++
Sbjct: 164 GAVHQ 168
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 6e-07
Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
++V G+ A +L E G V + L + QL
Sbjct: 3 TAIVTNVKHFGGMGSALRLSEA---GHTVACHDESFKQKDELEAFAETY------PQLKP 53
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGI 117
E +++ YG +++L++
Sbjct: 54 MSEQEPAELIEAVTSAYGQVDVLVSNDIF 82
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 7e-07
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 33/179 (18%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+LV G + G+G A L +G + +LDL R E L ++ D+T
Sbjct: 4 SALVTGGASGLGRAAALALKA---RGYRVV----------VLDL-RREGEDLIYVEGDVT 49
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAYEVNA 146
E + + +E+ L +++A+G+ E L K L EVN
Sbjct: 50 REEDVRRAVARAQEE-APLFAVVSAAGV------GLAEKILGKEGPHGLESFRRVLEVNL 102
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAAL 202
+G V++ + ++ E V+ N + A G IG +Y ASK +
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA------AYAASKGGV 155
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-07
Identities = 34/194 (17%), Positives = 56/194 (28%), Gaps = 55/194 (28%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+ ++ G + GIG K L + ++ D+ T
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAEVIA------------DL----ST 44
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
E +A A + + ++ L+ +G+ VL VN G
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLG--------------NVVSVNYFGA 90
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVA---------------------NLSARVGSIGDNR 188
++ P LK G ++ VA A V G+
Sbjct: 91 TELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ- 149
Query: 189 LGGWHSYRASKAAL 202
GG +Y SK AL
Sbjct: 150 -GGNLAYAGSKNAL 162
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-07
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-----LKNRFPER 80
+G V++V G + GIG K+LLE G V+ R D L R
Sbjct: 17 QGQVAIVTGGATGIGKAIVKELLE---LGSNVVIASRKLERLKSAADELQANLPPTKQAR 73
Query: 81 LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
+ +Q ++ E + KS + +G +N L+N G
Sbjct: 74 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-07
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 12/100 (12%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-------LKNRFP 78
+ ++LV GA GIG + +L +G V A + A + +
Sbjct: 6 RSALALVTGAGSGIGRAVSVRLAG---EGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGS-LNLLINASGI 117
Q D++ + ++ + +++++ +GI
Sbjct: 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-06
Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 23/180 (12%)
Query: 27 KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDV 83
KG V LV A+ GIG A++ L + G V+ + + D L + R++
Sbjct: 21 KGKVVLVTAAAGTGIGSTTARRALLE---GADVVISDYHERRLGETRDQLADLGLGRVEA 77
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
+ D+T ++A EK G L++L+N +G+ +T + +
Sbjct: 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL-------GGQTPVVDMTDEEWDRVLN 130
Query: 144 VNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
V + + V G V+ N ++ +G Y A+KA +
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGG------VIVNNASVLGWRAQ---HSQSHYAAAKAGV 181
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 3e-06
Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 29/180 (16%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G +LV GA +GIG + K L G V+A R + L + +
Sbjct: 6 SGLRALVTGAGKGIGRDTVKALHA---SGAKVVAVTRTNSDLVSLAKECPGI----EPVC 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+DL E + G ++LL+N + + ++QP + K VN
Sbjct: 59 VDLGDWDATEKAL----GGIGPVDLLVNNAAL----VIMQPFLEVTKEAFDRSF---SVN 107
Query: 146 AVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
V + ++ ++ G G ++V N+S+ V + L +Y ++K A+
Sbjct: 108 LRSVFQVSQMVARDMINRGVPG-----SIV-NVSSMVAHVTFPNLI---TYSSTKGAMTM 158
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 3e-06
Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPE-RLDV 83
KG +LV G++ GIG A L+ +G V+ R + ++ ++P+ L
Sbjct: 9 KGKTALVTGSTAGIGKAIATSLVA---EGANVLINGRREENVNETIKEIRAQYPDAILQP 65
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
+ DL E + + EKY +++LIN GI + +E
Sbjct: 66 VVADLGTEQGCQD----VIEKYPKVDILINNLGI-------FEPVEYFDIPDEDWFKLFE 114
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VN + + + + + G R V +++ + Y A+K
Sbjct: 115 VNIMSGVRLTRSYLKKMIERKEG--R----VIFIASEAAIMP---SQEMAHYSATKTMQ 164
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 3e-06
Identities = 40/183 (21%), Positives = 65/183 (35%), Gaps = 35/183 (19%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G LV GA +GIG + L G V+A R L+ + +
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHA---TGARVVAVSRTQADLDSLVRECPGI----EPVC 58
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+DL E + G ++LL+N + + +LQP + K EVN
Sbjct: 59 VDLGDWEATERAL----GSVGPVDLLVNNAAV----ALLQPFLEVTKEAFDRSF---EVN 107
Query: 146 AVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
I V + + + G G A+V N+S++ Y ++K A
Sbjct: 108 LRAVIQVSQIVARGL---IARGVPG-----AIV-NVSSQCSQRAVTNHS---VYCSTKGA 155
Query: 202 LNH 204
L+
Sbjct: 156 LDM 158
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 5e-06
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 37/184 (20%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDV 83
+G V+L+ GAS GIG A+ L + V R L L + ++ V
Sbjct: 6 QGKVALITGASSGIGEATARALAAEGAA--VAIAARR---VEKLRALGDELTAAGAKVHV 60
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL----- 138
L+LD+ ++A+ S E G L++L+N +GI+ L VE +
Sbjct: 61 LELDVADRQGVDAAVASTVEALGGLDILVNNAGIML----------LGPVEDADTTDWTR 110
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRA 197
M + N +G + + + P L R V + SI G + Y+A
Sbjct: 111 M--IDTNLLGLMYMTRAALPHLL-------RSKGTVVQ----MSSIAGRVNVRNAAVYQA 157
Query: 198 SKAA 201
+K
Sbjct: 158 TKFG 161
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-06
Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 39/186 (20%)
Query: 29 GVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNG-----------ATGLLDLKNR 76
V + G++ GIG + L G VI R T + + +R
Sbjct: 2 SVIAITGSASGIGAALKELLAR---AGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDR 58
Query: 77 FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
LD L V T L + +N G+ ++ + L + +
Sbjct: 59 CGGVLDGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPA- 108
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
A V ++ P+++ G A G +Y
Sbjct: 109 ----AVIVGSIAATQPGAAELPMVEAMLAGD------EARAIELAEQQG----QTHLAYA 154
Query: 197 ASKAAL 202
SK A+
Sbjct: 155 GSKYAV 160
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-05
Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 46/199 (23%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIAT--CRNPNGATGLLDLKNRFPE 79
+G V+ V GA+RG G + A++ G +IA C+ + PE
Sbjct: 10 EGKVAFVTGAARGQGRSHAVRLAQE-------GADIIAVDICKPIRAGVVDTAIPASTPE 62
Query: 80 RLD--------------VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL- 124
L ++D+ ++A+ S E+ G L++++ +GI + + L
Sbjct: 63 DLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLD 122
Query: 125 -QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183
E ++ ++N G +K P + GG G + S+ G
Sbjct: 123 KTSEEDWTEM--------IDINLAGVWKTVKAGVPHMIAGGRG-----GSIILTSSVGGL 169
Query: 184 IGDNRLGGWHSYRASKAAL 202
Y A+K +
Sbjct: 170 KAY---PHTGHYVAAKHGV 185
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-05
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
G ++V GA GIG A G V+A R ++ + + +
Sbjct: 30 AGRTAVVTGAGSGIGRAIAHGYAR---AGAHVLAWGRTDGVKEVADEIADG-GGSAEAVV 85
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
DL A+ + +++L+N +GI
Sbjct: 86 ADLADLEGAANVAEELAA-TRRVDVLVNNAGI 116
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-05
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 35/177 (19%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
+ LV ASRGIG A L + +G V RN E L
Sbjct: 18 RDKGVLVLAASRGIGRAVADVLSQ---EGAEVTICARN--------------EELLKRSG 60
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
V + + EK +++L+ +G P +++ A +
Sbjct: 61 HRYVVCD-LRKDLDLLFEKVKEVDILVLNAG---GP----KAGFFDELTNEDFKEAIDSL 112
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
+ I ++++ P +K G G R + +++ L + +++ AL
Sbjct: 113 FLNMIKIVRNYLPAMKEKGWG--R----IVAITSFSVISPIENLY---TSNSARMAL 160
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-05
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 17 TSSASASVKW----KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72
+ ++ W G V++V GA+RGIG A+ G + A L
Sbjct: 198 AADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFAR---DGATVVAIDVDGAAEDLKR 254
Query: 73 LKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG-SLNLLINASGI 117
+ ++ L LD+T + ++ + E +G +++L+N +GI
Sbjct: 255 VADKVGGT--ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 2e-05
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
+LV G SRGIG A+ L+ +G V RNP A L L DL
Sbjct: 4 KALVTGGSRGIGRAIAEALVA---RGYRVAIASRNPEEAAQSLGAV--------PLPTDL 52
Query: 89 TVESTIEASAKSIKEKYGSLNLLINASGI 117
+ + K E G L++L++A+ +
Sbjct: 53 EKDD-PKGLVKRALEALGGLHVLVHAAAV 80
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 3e-05
Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 28/188 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQL-----------LEKNDKGCVIATCRNPNGATGLLDLKN 75
+G V+ + GA+RG G A ++ + CV +P+ + + L
Sbjct: 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69
Query: 76 RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVE 134
R+ +D + G L++++ +G+ + V
Sbjct: 70 AANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV- 128
Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
++N G + +P + GG G + +S+ G
Sbjct: 129 -------MDINVTGTWNTVMAGAPRIIEGGRG-----GSIILISSAAGMKMQ---PFMIH 173
Query: 195 YRASKAAL 202
Y ASK A+
Sbjct: 174 YTASKHAV 181
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 5e-05
Identities = 45/194 (23%), Positives = 65/194 (33%), Gaps = 42/194 (21%)
Query: 22 ASVKWKGGVSLVQGASRGIG----LEFAKQ--------LLEKNDKGCVIATCRNPNGATG 69
S K KG L+ G GIG + FAK+ L E+ D G
Sbjct: 41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-EGVKC 99
Query: 70 LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
+L L DL+ E + + + GSLN+L+N P+
Sbjct: 100 VL------------LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ------QYPQQG 141
Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189
L + L + +N V K LK G I N ++ V G+ L
Sbjct: 142 LEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII--------NTASIVAYEGNETL 193
Query: 190 GGWHSYRASKAALN 203
Y A+K A+
Sbjct: 194 ---IDYSATKGAIV 204
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 35/194 (18%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
+ V LV G +RG G A +L E+ D I T P + L+ E+
Sbjct: 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK 68
Query: 81 LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
++D+ + + + ++G L++++ +GI L +
Sbjct: 69 TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICP----LGAHLPVQAFAD- 123
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--------DNR 188
V+ VG I + P L G +++ + G I +
Sbjct: 124 --AFD--VDFVGVINTVHAALPYLTSGA-------SII-TTGSVAGLIAAAQPPGAGGPQ 171
Query: 189 LGGWHSYRASKAAL 202
G Y +K +
Sbjct: 172 GPGGAGYSYAKQLV 185
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 2e-04
Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 30/189 (15%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
+G V+ + GA+RG G A L + D + + P L R E
Sbjct: 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA 86
Query: 81 LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVE 134
L Q+D+ ++A+ + G L++++ + + S L T +
Sbjct: 87 LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM- 145
Query: 135 KSSLMLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
+VN G + + P ++ G ++V S+ G G
Sbjct: 146 -------IDVNLNGAWITARVAIPHIMAGKRGG-----SIV-FTSSIGGLRGA---ENIG 189
Query: 194 SYRASKAAL 202
+Y ASK L
Sbjct: 190 NYIASKHGL 198
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 2e-04
Identities = 39/187 (20%), Positives = 67/187 (35%), Gaps = 27/187 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
G V+ + GA+RG G A +L D IA+ P L + E
Sbjct: 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71
Query: 81 LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
+ Q D+ ++ A+ ++ ++ G L++++ +GI +
Sbjct: 72 IGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP------MSAGD---DGW 122
Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG-GWHSY 195
++ VN G IK P L GTG + +S+ G G G Y
Sbjct: 123 HDVID--VNLTGVYHTIKVAIPTLVKQGTG-----GSIVLISSSAGLAGVGSADPGSVGY 175
Query: 196 RASKAAL 202
A+K +
Sbjct: 176 VAAKHGV 182
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 3e-04
Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 42/195 (21%)
Query: 27 KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
+G V+ + GA+RG G + A + G I C + + PE LD
Sbjct: 14 QGRVAFITGAARGQGRSHAVRLAAE-------GADIIACDICAPVSASVTYAPASPEDLD 66
Query: 83 --------------VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PE 127
LD+ ++ + E++G L++++ +G+LS V + +
Sbjct: 67 ETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTD 126
Query: 128 TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187
+ V VN G ++ P + G G + +S+ G
Sbjct: 127 EQWDTV--------IGVNLTGTWRTLRATVPAMIEAGNG-----GSIVVVSSSAGLKAT- 172
Query: 188 RLGGWHSYRASKAAL 202
G Y ASK L
Sbjct: 173 --PGNGHYSASKHGL 185
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 4e-04
Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 43/195 (22%)
Query: 22 ASVKWKGGVSLVQGASRGIG----LEFAKQ---------LLEKNDKGCVIATCRNPNGAT 68
S + K +LV G GIG + +A++ E+ D V A G
Sbjct: 43 GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRK 101
Query: 69 GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET 128
+L L DL+ ES + +E G L++L +G
Sbjct: 102 AVL------------LPGDLSDESFARSLVHKAREALGGLDILALVAGK------QTAIP 143
Query: 129 TLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188
+ + + VN + + PLL G + I S+
Sbjct: 144 EIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASII--------TTSSIQAYQPSPH 195
Query: 189 LGGWHSYRASKAALN 203
L Y A+KAA+
Sbjct: 196 L---LDYAATKAAIL 207
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 231 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.98 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.98 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.97 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.96 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.96 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.96 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.96 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.96 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.96 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.96 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.95 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.94 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.94 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.94 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.92 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.91 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.88 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.88 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.88 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.88 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.87 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.87 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.87 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.85 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.85 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.85 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.85 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.85 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.85 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.85 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.84 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.84 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.83 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.83 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.83 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.83 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.82 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.82 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.82 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.82 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.82 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.82 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.81 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.81 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.81 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.81 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.8 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.8 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.8 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.8 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.8 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.8 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.8 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.8 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.79 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.79 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.79 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.79 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.79 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.79 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.79 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.78 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.77 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.77 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.77 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.77 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.76 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.76 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.75 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.75 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.74 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.74 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.74 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.73 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.73 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.72 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.71 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.71 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.71 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.71 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.69 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.69 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.68 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.67 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.66 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.66 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.65 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.63 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.61 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.6 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.58 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.57 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.56 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.53 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.51 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.47 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.44 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.44 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.43 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.41 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.4 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.39 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.39 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.37 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.36 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.12 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.08 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 99.0 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.95 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.87 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.8 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.66 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.57 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.55 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.54 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.52 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.5 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.45 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.42 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.36 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.31 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.25 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.25 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.23 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.23 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.21 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.2 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.15 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.14 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.14 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.12 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.1 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.07 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.03 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.01 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.91 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.9 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.88 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.88 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.84 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.83 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.82 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.81 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.79 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.78 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.77 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.72 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.69 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.69 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.65 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.63 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.62 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.61 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.6 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.6 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.58 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.57 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.56 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.52 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.51 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.51 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.48 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.47 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.44 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.42 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.41 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.4 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.39 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.32 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.3 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.29 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.28 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.24 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.24 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.21 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.17 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.15 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.13 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.1 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.06 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.05 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.02 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.02 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.98 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.97 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 96.97 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.96 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.95 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.94 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.92 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.92 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.89 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.88 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.87 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.87 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.87 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.86 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.8 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.8 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.79 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.78 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.68 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.62 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.61 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.58 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.58 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.56 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.55 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.55 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.46 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.45 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.41 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.38 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.37 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.37 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.36 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.31 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.3 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.26 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.25 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.19 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.1 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.1 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.08 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.05 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.01 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 95.98 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 95.94 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 95.93 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.93 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 95.88 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 95.87 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 95.87 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 95.83 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 95.82 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 95.82 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 95.79 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 95.73 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 95.65 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 95.61 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 95.56 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 95.52 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 95.52 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.51 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 95.5 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.46 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.45 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 95.45 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.37 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 95.37 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.37 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.36 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 95.33 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.31 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 95.29 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 95.29 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 95.22 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 95.17 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 95.16 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 95.15 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 95.14 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 95.13 | |
| 3aoe_E | 419 | Glutamate dehydrogenase; rossmann fold, NADH, oxid | 95.09 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 95.08 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 95.08 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 95.02 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 94.98 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 94.94 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 94.94 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 94.89 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 94.88 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 94.83 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 94.78 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 94.71 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 94.71 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 94.69 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 94.64 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 94.63 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 94.61 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 94.6 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 94.5 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 94.49 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 94.47 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 94.42 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 94.4 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 94.33 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 94.32 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 94.3 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-48 Score=311.78 Aligned_cols=190 Identities=19% Similarity=0.248 Sum_probs=177.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|+||++|||||++|||+++|++|+++|++ |++++|+++.++.+.++++..+.++.++++|++++++++++++++.+
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~--Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSI--VVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999997 89999999888888777777788999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+||+||+||||||+.. +..++.+.+.++|++++++|+.++++++|+++|+|++++.| +|||++|..+.
T Consensus 81 ~~G~iDiLVNNAGi~~------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IVnisS~~g~ 148 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMD------GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG------VIVNTASIAGI 148 (254)
T ss_dssp HHSCCCEEEECCCCCC------TTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred HcCCCCEEEECCcccC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEechhhc
Confidence 9999999999999764 45678999999999999999999999999999999988875 99999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++..+|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 149 ~~---~~~~~~Y~asKaal~~ltr~lA~ela~~gIr-VN~V~PG~i~T 192 (254)
T 4fn4_A 149 RG---GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR-AVAVLPGTVKT 192 (254)
T ss_dssp CS---SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred CC---CCCChHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEEeCCCCC
Confidence 87 7888999999999999999999999999999 88999999975
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=304.94 Aligned_cols=190 Identities=18% Similarity=0.237 Sum_probs=175.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|+||++|||||++|||+++|++|+++|++ |++++|+++.+++..+.+...+.++.++++|++|+++++++++++.+
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~--Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGAR--VILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999997 99999998888877777777788999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+||+||+||||||+. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++.+ ++||++||..+.
T Consensus 83 ~~G~iDiLVNNAG~~-------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~-----G~IVnisS~~~~ 150 (255)
T 4g81_D 83 EGIHVDILINNAGIQ-------YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG-----GKIINIGSLTSQ 150 (255)
T ss_dssp TTCCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGGT
T ss_pred HCCCCcEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC-----CEEEEEeehhhc
Confidence 999999999999987 46789999999999999999999999999999999765332 599999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 151 ~~---~~~~~~Y~asKaal~~ltr~lA~ela~~gIr-VN~V~PG~i~T 194 (255)
T 4g81_D 151 AA---RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQ-TNAIGPGYILT 194 (255)
T ss_dssp SB---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeeCCCCC
Confidence 77 7888999999999999999999999999999 88999999975
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=298.75 Aligned_cols=186 Identities=20% Similarity=0.256 Sum_probs=168.8
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
|+.+|+||++|||||++|||+++|++|++.|++ |++++|+++.++...++ .+.++.++++|++|+++++++++++
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~--V~i~~r~~~~l~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGAR--VFITGRRKDVLDAAIAE---IGGGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---cCCCeEEEEecCCCHHHHHHHHHHH
Confidence 445799999999999999999999999999997 99999987666554333 3678899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++||+||+||||||.. +..++.+.+.++|++.+++|+.++++++|+++|+|+++ ++||+++|..
T Consensus 98 ~~~~G~iDiLVNNAG~~-------~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--------G~IInisS~~ 162 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGG-------SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--------SSVVLTGSTA 162 (273)
T ss_dssp HHHHSCEEEEEECCCCC-------CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEECCGG
T ss_pred HHHcCCCCEEEECCCCC-------CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--------CeEEEEeehh
Confidence 99999999999999986 46788999999999999999999999999999999763 3999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .|++.+|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 163 ~~~~---~~~~~~Y~asKaav~~ltr~lA~Ela~~gIr-VN~V~PG~i~T 208 (273)
T 4fgs_A 163 GSTG---TPAFSVYAASKAALRSFARNWILDLKDRGIR-INTLSPGPTET 208 (273)
T ss_dssp GGSC---CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEE-EEEEEECSBCC
T ss_pred hccC---CCCchHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeeCCCCC
Confidence 8877 7888999999999999999999999999999 88999999975
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=293.18 Aligned_cols=188 Identities=19% Similarity=0.216 Sum_probs=167.9
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
|+++|+||++|||||++|||+++|++|+++|++ |++++|+++..+.+. .+.+.+.++.++++|++++++++++++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~--Vv~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~ 77 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAI--PVVFARHAPDGAFLD-ALAQRQPRATYLPVELQDDAQCRDAVAQT 77 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCCHHHHH-HHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCcccHHHHH-HHHhcCCCEEEEEeecCCHHHHHHHHHHH
Confidence 457899999999999999999999999999997 888999887654433 33444778999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++||+||+||||||+.. ....+.+.++|++.+++|+.++++++|+++|+|++++ | +||++||..
T Consensus 78 ~~~~G~iDiLVNnAGi~~--------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~IVnisS~~ 142 (258)
T 4gkb_A 78 IATFGRLDGLVNNAGVND--------GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-G------AIVNISSKT 142 (258)
T ss_dssp HHHHSCCCEEEECCCCCC--------CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCTH
T ss_pred HHHhCCCCEEEECCCCCC--------CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C------eEEEEeehh
Confidence 999999999999999763 2334678899999999999999999999999997654 4 999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 143 ~~~~---~~~~~~Y~asKaav~~ltr~lA~ela~~gIr-VN~V~PG~i~T 188 (258)
T 4gkb_A 143 AVTG---QGNTSGYCASKGAQLALTREWAVALREHGVR-VNAVIPAEVMT 188 (258)
T ss_dssp HHHC---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCC
T ss_pred hccC---CCCchHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCCCCC
Confidence 9887 7888999999999999999999999999999 88999999975
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=288.54 Aligned_cols=183 Identities=19% Similarity=0.244 Sum_probs=164.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|+||++|||||++|||+++|++|+++|++ |++++|+.. ++..++++..+.++.++++|++|+++++++++
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~--Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~---- 76 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAE--VVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT---- 76 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST----
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCE--EEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH----
Confidence 5789999999999999999999999999997 888898754 34455566668899999999999999877664
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++||+||||||+. ...++.+.+.++|++.+++|+.++|+++|+++|+|.+++.+ ++|||+||..+.
T Consensus 77 -~g~iDiLVNNAGi~-------~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~-----G~IVnisS~~~~ 143 (247)
T 4hp8_A 77 -DAGFDILVNNAGII-------RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRS-----GKVVNIASLLSF 143 (247)
T ss_dssp -TTCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGGT
T ss_pred -hCCCCEEEECCCCC-------CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCC-----cEEEEEechhhC
Confidence 48999999999987 46788999999999999999999999999999999876532 599999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 144 ~g---~~~~~~Y~asKaav~~ltr~lA~Ela~~gIr-VNaV~PG~i~T 187 (247)
T 4hp8_A 144 QG---GIRVPSYTAAKHGVAGLTKLLANEWAAKGIN-VNAIAPGYIET 187 (247)
T ss_dssp SC---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred CC---CCCChHHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEeeCCCCC
Confidence 87 7888999999999999999999999999999 88999999985
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-43 Score=282.14 Aligned_cols=179 Identities=15% Similarity=0.118 Sum_probs=162.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||+++|++|+++|++ |++++|+++..+++.+ .+.++.++++|++|+++++++++++.++||+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~--V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK--VCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999997 8999998655443322 2567899999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
||+||||||.. ...++.+.+.++|++.+++|+.++++++|++.|+|.+++ | +||+++|..+..+
T Consensus 76 iDiLVNNAG~~-------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G------~IInisS~~~~~~-- 139 (247)
T 3ged_A 76 IDVLVNNACRG-------SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-G------RIINIASTRAFQS-- 139 (247)
T ss_dssp CCEEEECCCCC-------CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C------EEEEECCGGGTSC--
T ss_pred CCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------cEEEEeecccccC--
Confidence 99999999987 467899999999999999999999999999999998765 4 9999999998877
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.|+..+|++||+|+.+|+|+++.|+++ ||| +|+|+||.|++
T Consensus 140 -~~~~~~Y~asKaal~~ltk~lA~ela~-~Ir-VN~I~PG~i~t 180 (247)
T 3ged_A 140 -EPDSEAYASAKGGIVALTHALAMSLGP-DVL-VNCIAPGWINV 180 (247)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTT-TSE-EEEEEECSBCC
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHCC-CCE-EEEEecCcCCC
Confidence 788899999999999999999999998 999 88999999975
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=277.53 Aligned_cols=174 Identities=22% Similarity=0.309 Sum_probs=156.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
|+||++|||||++|||+++|++|+++|++ |++++|+++.++. ..+.++..+++|++|+++++++++ ++
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~--Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~ 76 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAE--VVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL 76 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc
Confidence 68999999999999999999999999997 9999998766543 224588999999999999887764 57
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
|+||+||||||+. .+..+.+.++|++.+++|+.++++++|+++|+|++++ ++|||+||..+..+
T Consensus 77 g~iDiLVNNAGi~---------~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-------G~IVnisS~~~~~~ 140 (242)
T 4b79_A 77 PRLDVLVNNAGIS---------RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-------GSILNIASMYSTFG 140 (242)
T ss_dssp SCCSEEEECCCCC---------CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-------EEEEEECCGGGTSC
T ss_pred CCCCEEEECCCCC---------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CeEEEEeeccccCC
Confidence 9999999999975 3567889999999999999999999999999997654 49999999999887
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 141 ---~~~~~~Y~asKaav~~ltr~lA~Ela~~gIr-VNaV~PG~i~T 182 (242)
T 4b79_A 141 ---SADRPAYSASKGAIVQLTRSLACEYAAERIR-VNAIAPGWIDT 182 (242)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeCCCCC
Confidence 7888999999999999999999999999999 88999999985
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=281.99 Aligned_cols=181 Identities=18% Similarity=0.267 Sum_probs=161.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|+||++|||||++|||+++|++|+++|++ |++++|+.... ..+..++++|++++++++++++++.+
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 74 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQ--VLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQ 74 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCE--EEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCE--EEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999997 88999975421 12345789999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||+..+ ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+.
T Consensus 75 ~~G~iDilVnnAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~Iv~isS~~~~ 143 (261)
T 4h15_A 75 RLGGVDVIVHMLGGSSA-----AGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSG------VVVHVTSIQRV 143 (261)
T ss_dssp HTSSCSEEEECCCCCCC-----CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred HcCCCCEEEECCCCCcc-----CCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCc------eEEEEEehhhc
Confidence 99999999999997531 24578899999999999999999999999999999988775 99999999988
Q ss_pred cCCCCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .| +...|++||+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 144 ~~---~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIr-VN~V~PG~i~T 188 (261)
T 4h15_A 144 LP---LPESTTAYAAAKAALSTYSKAMSKEVSPKGVR-VVRVSPGWIET 188 (261)
T ss_dssp SC---CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred cC---CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEeCCCcCC
Confidence 76 44 56789999999999999999999999999 88999999985
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=275.61 Aligned_cols=191 Identities=13% Similarity=0.224 Sum_probs=169.4
Q ss_pred ccccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++|+||++|||||+| |||+++|++|+++|++ |++++|+++..+++.+++++.+ .++.++++|+++++++++++++
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~--Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAK--LVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence 578999999999875 9999999999999997 9999999888887776666544 4899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|++|||||+..+.+ ....+.+.+.++|+..+++|+.+++.+.+.+.++++++ ++||++||.
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--------G~IVnisS~ 148 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMED---LRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG--------GSIVATTYL 148 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGG---GTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC--------EEEEEEECG
T ss_pred HHHHhCCCCEEEeccccccccc---cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CEEEEEecc
Confidence 9999999999999999763111 23456788889999999999999999999999887653 499999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 149 ~~~~~---~~~~~~Y~asKaal~~ltr~lA~Ela~~gIr-VN~V~PG~i~T 195 (256)
T 4fs3_A 149 GGEFA---VQNYNVMGVAKASLEANVKYLALDLGPDNIR-VNAISAGPIRT 195 (256)
T ss_dssp GGTSC---CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCCCS
T ss_pred ccccC---cccchhhHHHHHHHHHHHHHHHHHhCccCeE-EEEEecCCCCC
Confidence 98877 7889999999999999999999999999999 88999999975
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=268.04 Aligned_cols=190 Identities=16% Similarity=0.132 Sum_probs=168.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.
T Consensus 2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFT--VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp ---CCSCEEEEECCSSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999997 9999999888888777766667899999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+
T Consensus 80 ~~-g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~ 145 (252)
T 3h7a_A 80 AH-APLEVTIFNVGAN-------VNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG------KIFFTGATAS 145 (252)
T ss_dssp HH-SCEEEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEGGG
T ss_pred hh-CCceEEEECCCcC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHHH
Confidence 99 9999999999987 35678889999999999999999999999999999887654 9999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+++|+++++.|++++||++.|+|+||.|++
T Consensus 146 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T 191 (252)
T 3h7a_A 146 LRG---GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDT 191 (252)
T ss_dssp TCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----
T ss_pred cCC---CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCC
Confidence 877 6888999999999999999999999999999438999999874
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=269.09 Aligned_cols=189 Identities=22% Similarity=0.273 Sum_probs=172.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGAS--VVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999997 8899999877777766666667899999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|+|++++.| +||++||..+
T Consensus 85 ~~~g~id~lv~nAg~~~-------~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~ 150 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGG-------PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG------AILNISSMAG 150 (256)
T ss_dssp HHHSCCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGG
T ss_pred HHcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHHH
Confidence 99999999999999873 3445 78899999999999999999999999999887765 9999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 151 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 195 (256)
T 3gaf_A 151 ENT---NVRMASYGSSKAAVNHLTRNIAFDVGPMGIR-VNAIAPGAIKT 195 (256)
T ss_dssp TCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred cCC---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEEEccccC
Confidence 776 6888899999999999999999999999999 77999999975
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=269.11 Aligned_cols=190 Identities=17% Similarity=0.192 Sum_probs=171.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CCC-ceeEEEecCCChHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPE-RLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~~-~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+.. .+. ++.++.+|++|++++++++++
T Consensus 3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAA--VAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence 35789999999999999999999999999997 88999998777765554433 444 599999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||.
T Consensus 81 ~~~~~g~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~ 147 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQG-------RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA------AIVCVNSL 147 (265)
T ss_dssp HHHHHCSCSEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE------EEEEEEEG
T ss_pred HHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe------EEEEECCc
Confidence 999999999999999986 46678889999999999999999999999999999887664 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 148 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~t 194 (265)
T 3lf2_A 148 LASQP---EPHMVATSAARAGVKNLVRSMAFEFAPKGVR-VNGILIGLVES 194 (265)
T ss_dssp GGTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ccCCC---CCCchhhHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeCcCcC
Confidence 98877 6888999999999999999999999999999 77999999975
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=271.16 Aligned_cols=193 Identities=21% Similarity=0.236 Sum_probs=167.9
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC----------------CccchhhhhhcCCCceeEEE
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----------------GATGLLDLKNRFPERLDVLQ 85 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~----------------~~~~~~~~~~~~~~~v~~~~ 85 (231)
|..+++||++|||||++|||+++|++|+++|++ |++++|+.. .++.+.+.....+.++.+++
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGAD--IIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAE 82 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEE
Confidence 445789999999999999999999999999997 888888732 22223344445567899999
Q ss_pred ecCCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCC
Q 026924 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT 165 (231)
Q Consensus 86 ~Dls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~ 165 (231)
+|++|+++++++++++.+++|++|+||||||... ...++.+.+.++|++.+++|+.++++++++++|+|.+++.
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 156 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN------GGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR 156 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999864 3335888999999999999999999999999999987653
Q ss_pred CcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 166 GIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 166 ~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ ++||++||..+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 157 ~-----g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~-vn~v~PG~v~T 213 (286)
T 3uve_A 157 G-----GSIILTSSVGGLKA---YPHTGHYVAAKHGVVGLMRAFGVELGQHMIR-VNSVHPTHVKT 213 (286)
T ss_dssp C-----EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBSS
T ss_pred C-----cEEEEECchhhccC---CCCccHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCcccC
Confidence 2 49999999998877 6888899999999999999999999999999 77999999975
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=272.44 Aligned_cols=198 Identities=19% Similarity=0.211 Sum_probs=169.1
Q ss_pred cccccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC------------CccchhhhhhcCCCceeEE
Q 026924 17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVL 84 (231)
Q Consensus 17 ~~~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~ 84 (231)
..|..+..+++||++|||||++|||+++|++|++.|++ |++++|+.. .++...+.++..+.++.++
T Consensus 17 ~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (299)
T 3t7c_A 17 QGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGAD--IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIAS 94 (299)
T ss_dssp -----CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEE
Confidence 34445666789999999999999999999999999997 888888732 2223334445557799999
Q ss_pred EecCCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC
Q 026924 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG 164 (231)
Q Consensus 85 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~ 164 (231)
++|++|+++++++++++.+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++
T Consensus 95 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 168 (299)
T 3t7c_A 95 QVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALAS------EGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK 168 (299)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC------CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999874 333478899999999999999999999999999987765
Q ss_pred CCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ ++||++||..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 169 ~~-----g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 226 (299)
T 3t7c_A 169 RG-----GSIVFTSSIGGLRG---AENIGNYIASKHGLHGLMRTMALELGPRNIR-VNIVCPSSVAT 226 (299)
T ss_dssp SC-----EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCBSS
T ss_pred CC-----cEEEEECChhhccC---CCCcchHHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCCccC
Confidence 32 59999999998877 6888899999999999999999999999999 77999999975
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-40 Score=267.84 Aligned_cols=189 Identities=19% Similarity=0.286 Sum_probs=171.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+ .++.++++|++|+++++++++++.
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGAN--VAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999997 8899999887777665555545 689999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..+
T Consensus 84 ~~~g~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~ 150 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVF-------PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG------RVVLTSSITG 150 (262)
T ss_dssp HHHSCCSEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSC------EEEEECCSBT
T ss_pred HHhCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEechhh
Confidence 9999999999999987 35678889999999999999999999999999999887765 9999999987
Q ss_pred c-cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 S-IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. .+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 151 ~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~-vn~v~PG~v~t 196 (262)
T 3pk0_A 151 PITG---YPGWSHYGATKAAQLGFMRTAAIELAPHKIT-VNAIMPGNIMT 196 (262)
T ss_dssp TTBC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCC
T ss_pred ccCC---CCCChhhHHHHHHHHHHHHHHHHHHHhhCcE-EEEEEeCcCcC
Confidence 5 44 6788899999999999999999999999999 77999999874
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-40 Score=269.22 Aligned_cols=192 Identities=17% Similarity=0.210 Sum_probs=167.6
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-------------CCccchhhhhhcCCCceeEEEecC
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-------------NGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-------------~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
|..+++||++|||||++|||+++|++|+++|++ |++++|+. +..+...+.....+.++.++.+|+
T Consensus 5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 82 (277)
T 3tsc_A 5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGAD--IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT 82 (277)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred cccccCCCEEEEECCccHHHHHHHHHHHHcCCE--EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 445789999999999999999999999999997 88888842 222233344445577899999999
Q ss_pred CChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcc
Q 026924 89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIE 168 (231)
Q Consensus 89 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~ 168 (231)
+|+++++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++.+
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-- 153 (277)
T 3tsc_A 83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAA-------PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRG-- 153 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC--
Confidence 9999999999999999999999999999873 5678899999999999999999999999999999876532
Q ss_pred cCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 169 ~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||++||..+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 154 ---g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 209 (277)
T 3tsc_A 154 ---GSIILISSAAGMKM---QPFMIHYTASKHAVTGLARAFAAELGKHSIR-VNSVHPGPVNT 209 (277)
T ss_dssp ---EEEEEECCGGGTSC---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBSS
T ss_pred ---CEEEEEccHhhCCC---CCCchhhHHHHHHHHHHHHHHHHHhCccCeE-EEEEEeCCCcC
Confidence 49999999998877 6888899999999999999999999999999 77999999975
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=266.95 Aligned_cols=190 Identities=16% Similarity=0.213 Sum_probs=172.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
...+++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 6 GGLLTDKVVVISGVGPALGTTLARRCAEQGAD--LVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999997 8999999877777766666667899999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ | +||++||..+
T Consensus 84 ~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~ 150 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVP------SMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-G------AVVNVNSMVV 150 (264)
T ss_dssp HHTSCCSEEEECCCSCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-C------EEEEECCGGG
T ss_pred HHcCCCcEEEECCCCCC------CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEECcchh
Confidence 99999999999999753 456788999999999999999999999999999998755 4 9999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 151 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 195 (264)
T 3ucx_A 151 RHS---QAKYGAYKMAKSALLAMSQTLATELGEKGIR-VNSVLPGYIWG 195 (264)
T ss_dssp GCC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEESSCBS
T ss_pred ccC---CCccHHHHHHHHHHHHHHHHHHHHhCccCeE-EEEEecCcccc
Confidence 877 6888899999999999999999999999999 77999999864
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=269.92 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=171.0
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC---ceeEEEecCCChHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dls~~~~v~~~ 97 (231)
.|.+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+...+.+...+. ++.++++|++|+++++++
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~ 81 (281)
T 3svt_A 4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAS--VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA 81 (281)
T ss_dssp ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence 4567889999999999999999999999999997 88899998777766555554444 899999999999999999
Q ss_pred HHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
++++.+++|++|+||||||... ...++.+.+.++|++.+++|+.++++++++++|.|.+++.| +||++
T Consensus 82 ~~~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~i 149 (281)
T 3svt_A 82 VDAVTAWHGRLHGVVHCAGGSE------NIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGG------SFVGI 149 (281)
T ss_dssp HHHHHHHHSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEE
T ss_pred HHHHHHHcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEE
Confidence 9999999999999999999743 45678899999999999999999999999999999887765 99999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+ .++...|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 150 sS~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~-vn~v~PG~v~t 199 (281)
T 3svt_A 150 SSIAASNT---HRWFGAYGVTKSAVDHLMQLAADELGASWVR-VNSIRPGLIRT 199 (281)
T ss_dssp CCHHHHSC---CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred eCHHHcCC---CCCChhHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeCcCcC
Confidence 99988776 6788899999999999999999999999999 77999999874
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=269.49 Aligned_cols=192 Identities=21% Similarity=0.201 Sum_probs=170.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVT--VGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999997 88999998777777666666677899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||+.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||..+.
T Consensus 102 ~~g~iD~lVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~~~ 169 (283)
T 3v8b_A 102 KFGHLDIVVANAGING------VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG------AIVVVSSINGT 169 (283)
T ss_dssp HHSCCCEEEECCCCCC------CBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTT
T ss_pred HhCCCCEEEECCCCCC------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------eEEEEcChhhc
Confidence 9999999999999863 34678889999999999999999999999999999887654 99999999876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
... +.++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 170 ~~~-~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 215 (283)
T 3v8b_A 170 RTF-TTPGATAYTATKAAQVAIVQQLALELGKHHIR-VNAVCPGAIET 215 (283)
T ss_dssp TBC-CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEE-EEEEEECSBSS
T ss_pred cCC-CCCCchHHHHHHHHHHHHHHHHHHHhCccCcE-EEEEEeCCCcC
Confidence 521 15788899999999999999999999999999 77999999975
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-40 Score=269.04 Aligned_cols=189 Identities=16% Similarity=0.269 Sum_probs=173.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.+
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGAR--ILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999996 99999998777776666666677899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..+.
T Consensus 100 ~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iV~isS~~~~ 166 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQ-------FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG------KIVNIGSLTSE 166 (271)
T ss_dssp HTCCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred HCCCCCEEEECCCCC-------CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEccHHhC
Confidence 999999999999987 35678889999999999999999999999999999887665 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 167 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 210 (271)
T 4ibo_A 167 LA---RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQ-ANAIGPGYMLT 210 (271)
T ss_dssp SB---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHHhhhCeE-EEEEEeccEeC
Confidence 77 6888899999999999999999999999999 77999999974
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=270.33 Aligned_cols=192 Identities=22% Similarity=0.279 Sum_probs=173.1
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+..++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|++++++++++
T Consensus 21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (270)
T 3ftp_A 21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAM--VIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES 98 (270)
T ss_dssp --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH
Confidence 4455789999999999999999999999999997 89999988777776666655577899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.| +||++||.
T Consensus 99 ~~~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~ 165 (270)
T 3ftp_A 99 TLKEFGALNVLVNNAGIT-------QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG------RIVNITSV 165 (270)
T ss_dssp HHHHHSCCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCH
T ss_pred HHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECch
Confidence 999999999999999987 35677888999999999999999999999999999877654 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 166 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 212 (270)
T 3ftp_A 166 VGSAG---NPGQVNYAAAKAGVAGMTRALAREIGSRGIT-VNCVAPGFIDT 212 (270)
T ss_dssp HHHHC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred hhCCC---CCCchhHHHHHHHHHHHHHHHHHHHhhhCeE-EEEEEeCCCcC
Confidence 88877 6888999999999999999999999999999 77999999974
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=266.53 Aligned_cols=192 Identities=15% Similarity=0.189 Sum_probs=167.6
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-------hhhhhhcCCCceeEEEecCCChHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~v~~~~~Dls~~~~v 94 (231)
++|++++|++|||||++|||+++|++|+++|++ |++++|+.+..+. ..+.....+.++.++++|++|++++
T Consensus 3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 80 (285)
T 3sc4_A 3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGAN--VALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAV 80 (285)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHH
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence 456789999999999999999999999999996 9999998764332 3344444577899999999999999
Q ss_pred HHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEE
Q 026924 95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV 174 (231)
Q Consensus 95 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 174 (231)
+++++++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +|
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~i 147 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAI-------NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNP------HI 147 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCC-------CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSC------EE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EE
Confidence 999999999999999999999987 35678889999999999999999999999999999887765 99
Q ss_pred EEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC-CCCC
Q 026924 175 ANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR-HCRY 231 (231)
Q Consensus 175 v~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg-~~~~ 231 (231)
|++||..+..+. .++...|++||+|+++|+++++.|++++||+ +|+|+|| .+++
T Consensus 148 v~isS~~~~~~~--~~~~~~Y~asKaal~~~~~~la~e~~~~gI~-vn~v~PG~~v~t 202 (285)
T 3sc4_A 148 LTLSPPIRLEPK--WLRPTPYMMAKYGMTLCALGIAEELRDAGIA-SNTLWPRTTVAT 202 (285)
T ss_dssp EECCCCCCCSGG--GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCE-EEEEECSSCBCC
T ss_pred EEECChhhccCC--CCCCchHHHHHHHHHHHHHHHHHHhcccCcE-EEEEeCCCcccc
Confidence 999999877652 2667899999999999999999999999999 7799999 5653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=268.13 Aligned_cols=190 Identities=21% Similarity=0.329 Sum_probs=172.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+ .++.++++|++|+++++++++++
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGAN--VAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 45789999999999999999999999999997 8899999888777666665555 68999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..
T Consensus 114 ~~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iV~isS~~ 180 (293)
T 3rih_A 114 VDAFGALDVVCANAGIF-------PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRG------RVILTSSIT 180 (293)
T ss_dssp HHHHSCCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSC------EEEEECCSB
T ss_pred HHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEeChh
Confidence 99999999999999987 35678889999999999999999999999999999887765 999999998
Q ss_pred cc-cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GS-IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+. .+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 181 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~t 227 (293)
T 3rih_A 181 GPVTG---YPGWSHYGASKAAQLGFMRTAAIELAPRGVT-VNAILPGNILT 227 (293)
T ss_dssp TTTBB---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCC
T ss_pred hccCC---CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeE-EEEEecCCCcC
Confidence 75 55 6788899999999999999999999999999 77999999874
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=266.49 Aligned_cols=191 Identities=18% Similarity=0.291 Sum_probs=171.6
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+.. .+.++.++++|++|+++++++++++
T Consensus 15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 15 VLRLDGKRALITGATKGIGADIARAFAAAGAR--LVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 34789999999999999999999999999997 99999988777765544433 4678999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ ++||++||..
T Consensus 93 ~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----g~iv~isS~~ 160 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISH-------PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEG-----GAIITVASAA 160 (266)
T ss_dssp HHHHTSCSEEEEECCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGG
T ss_pred HHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEEcchh
Confidence 999999999999999873 5678889999999999999999999999999999876532 5999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 161 ~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 206 (266)
T 4egf_A 161 ALAP---LPDHYAYCTSKAGLVMATKVLARELGPHGIR-ANSVCPTVVLT 206 (266)
T ss_dssp GTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCBCS
T ss_pred hccC---CCCChHHHHHHHHHHHHHHHHHHHHhhhCeE-EEEEEeCCCcC
Confidence 8876 6888899999999999999999999999999 77999999874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=264.14 Aligned_cols=188 Identities=18% Similarity=0.207 Sum_probs=170.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGAR--VVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 889999988777776666666779999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC-CCCcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~~~~~~~~~iv~iss~~~~ 183 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.++ +.| +||++||..+.
T Consensus 81 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 147 (257)
T 3imf_A 81 FGRIDILINNAAGN-------FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKG------NIINMVATYAW 147 (257)
T ss_dssp HSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC------EEEEECCGGGG
T ss_pred cCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCc------EEEEECchhhc
Confidence 99999999999976 35678899999999999999999999999999999543 344 99999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhcc-ccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWS-KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++ ++||+ +|+|+||.|++
T Consensus 148 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIr-vn~v~PG~v~t 192 (257)
T 3imf_A 148 DA---GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR-VNAIAPGPIER 192 (257)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCE-EEEEEECCBSS
T ss_pred cC---CCCcHHHHHHHHHHHHHHHHHHHHhccccCeE-EEEEEECCCcC
Confidence 77 68888999999999999999999998 78999 77999999863
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=266.86 Aligned_cols=190 Identities=19% Similarity=0.237 Sum_probs=168.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-------------CCCccchhhhhhcCCCceeEEEecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-------------PNGATGLLDLKNRFPERLDVLQLDLTV 90 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-------------~~~~~~~~~~~~~~~~~v~~~~~Dls~ 90 (231)
.+++||++|||||++|||+++|++|+++|++ |++++|+ .+..+.+.+.+...+.++.++.+|++|
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGAD--IIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD 88 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 4689999999999999999999999999997 8888884 233333444555557789999999999
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccC
Q 026924 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD 170 (231)
Q Consensus 91 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (231)
+++++++++++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++.+
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~---- 157 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVL-------SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG---- 157 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC----
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC----
Confidence 9999999999999999999999999987 35678889999999999999999999999999999876522
Q ss_pred ceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 171 VAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 171 ~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||++||..+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 158 -g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 213 (280)
T 3pgx_A 158 -GSIVVVSSSAGLKA---TPGNGHYSASKHGLTALTNTLAIELGEYGIR-VNSIHPYSVET 213 (280)
T ss_dssp -EEEEEECCGGGTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred -CEEEEEcchhhccC---CCCchhHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcccC
Confidence 49999999998877 6888899999999999999999999999999 77999999874
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=264.01 Aligned_cols=191 Identities=21% Similarity=0.271 Sum_probs=169.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+..++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.. +.++.++.+|++|++++++++++
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 78 (271)
T 3tzq_B 4 SMTAELENKVAIITGACGGIGLETSRVLARAGAR--VVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDF 78 (271)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHH
Confidence 3455789999999999999999999999999997 889999987766654443 56889999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||...+ ....+.+.+.++|++.+++|+.++++++++++|+|++++.| +||++||.
T Consensus 79 ~~~~~g~id~lv~nAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~ 147 (271)
T 3tzq_B 79 TIDTFGRLDIVDNNAAHSDP-----ADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG------AIVNISSA 147 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCT-----TCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEECCG
T ss_pred HHHHcCCCCEEEECCCCCCC-----CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEECCH
Confidence 99999999999999998631 24567889999999999999999999999999999887765 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 148 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~t 194 (271)
T 3tzq_B 148 TAHAA---YDMSTAYACTKAAIETLTRYVATQYGRHGVR-CNAIAPGLVRT 194 (271)
T ss_dssp GGTSB---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred HHcCC---CCCChHHHHHHHHHHHHHHHHHHHHhhcCEE-EEEEEeCCCcC
Confidence 88877 6788899999999999999999999999999 77999999874
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=267.20 Aligned_cols=192 Identities=23% Similarity=0.330 Sum_probs=170.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++.+++++|++|||||++|||+++|++|+++|++ |++.+| +.+..+.+.+.+...+.++.++++|++|+++++++++
T Consensus 21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~ 98 (269)
T 4dmm_A 21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAK--VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFA 98 (269)
T ss_dssp ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3456789999999999999999999999999997 777777 4445555666666667789999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.| +||++||
T Consensus 99 ~~~~~~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS 165 (269)
T 4dmm_A 99 AVIERWGRLDVLVNNAGIT-------RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG------RIINIAS 165 (269)
T ss_dssp HHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECC
T ss_pred HHHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECc
Confidence 9999999999999999987 35678889999999999999999999999999999887665 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 166 ~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 213 (269)
T 4dmm_A 166 VVGEMG---NPGQANYSAAKAGVIGLTKTVAKELASRGIT-VNAVAPGFIAT 213 (269)
T ss_dssp HHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBTT
T ss_pred hhhcCC---CCCchhHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEEECCCcC
Confidence 988877 6888899999999999999999999999999 77999999974
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-40 Score=264.88 Aligned_cols=186 Identities=27% Similarity=0.377 Sum_probs=168.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+++..+.+.+.. +.+..++++|++|+++++++++++.+
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999997 888999876666554443 34578899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.| +||++||..+.
T Consensus 80 ~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~ 146 (248)
T 3op4_A 80 EFGGVDILVNNAGIT-------RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG------RIINVGSVVGT 146 (248)
T ss_dssp HHCCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHH
T ss_pred HcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcchhhc
Confidence 999999999999987 35678889999999999999999999999999999887654 99999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 147 ~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 190 (248)
T 3op4_A 147 MG---NAGQANYAAAKAGVIGFTKSMAREVASRGVT-VNTVAPGFIET 190 (248)
T ss_dssp HC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBSS
T ss_pred CC---CCCChHHHHHHHHHHHHHHHHHHHHHHhCeE-EEEEeeCCCCC
Confidence 77 6888999999999999999999999999999 77999999974
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=266.89 Aligned_cols=189 Identities=20% Similarity=0.246 Sum_probs=167.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC------------ccchhhhhhcCCCceeEEEecCCCh
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------------ATGLLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
.+++||++|||||++|||+++|++|+++|++ |++++|++.. .+...+.....+.++.++++|++|+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 83 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGAD--IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR 83 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 3678999999999999999999999999997 8888997432 2223334445577899999999999
Q ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCc
Q 026924 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV 171 (231)
Q Consensus 92 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (231)
++++++++++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.|
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g----- 151 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAITNAGIS-------TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG----- 151 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCC-------CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-----
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----
Confidence 999999999999999999999999987 35677889999999999999999999999999999887654
Q ss_pred eEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 172 ~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||++||..+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 152 -~iv~isS~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 206 (281)
T 3s55_A 152 -RIVTVSSMLGHSA---NFAQASYVSSKWGVIGLTKCAAHDLVGYGIT-VNAVAPGNIET 206 (281)
T ss_dssp -EEEEECCGGGGSC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEECSBCS
T ss_pred -EEEEECChhhcCC---CCCCchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCcccC
Confidence 9999999988877 6788899999999999999999999999999 77999999874
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=267.25 Aligned_cols=189 Identities=24% Similarity=0.265 Sum_probs=172.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++++++++++++++.++
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAK--VVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 999999987777776666666778999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc-
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS- 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~- 183 (231)
+|++|+||||||... ...++.+.+.++|++.+++|+.++++++++++|.|.+++.| +||++||..+.
T Consensus 83 ~g~iD~lvnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~ 150 (280)
T 3tox_A 83 FGGLDTAFNNAGALG------AMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGG------SLTFTSSFVGHT 150 (280)
T ss_dssp HSCCCEEEECCCCCC------SCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCSBTTT
T ss_pred cCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEcChhhCc
Confidence 999999999999764 35678899999999999999999999999999999987765 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 151 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIr-vn~v~PG~v~T 194 (280)
T 3tox_A 151 AG---FAGVAPYAASKAGLIGLVQALAVELGARGIR-VNALLPGGTDT 194 (280)
T ss_dssp BC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECSBSS
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEECCCCC
Confidence 44 6788899999999999999999999999999 77999999874
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=272.32 Aligned_cols=198 Identities=19% Similarity=0.257 Sum_probs=174.1
Q ss_pred ccccccccccccCeEEEEecCCCchhHHHHHHHHhcCC---ccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCC
Q 026924 16 FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKND---KGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTV 90 (231)
Q Consensus 16 ~~~~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~---~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~ 90 (231)
+..+..+..+++||++|||||++|||+++|++|++.|+ + |++++|+.+..+.+.+.+... +.++.++++|++|
T Consensus 21 m~~~~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d 98 (287)
T 3rku_A 21 MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMK--LILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ 98 (287)
T ss_dssp CTTCHHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSE--EEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC
T ss_pred cccCccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCce--EEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC
Confidence 33333344578999999999999999999999999987 6 888999987777765554332 5689999999999
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccC
Q 026924 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD 170 (231)
Q Consensus 91 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (231)
+++++++++++.+++|++|+||||||... +..++.+.+.++|++.+++|+.++++++++++|.|++++.|
T Consensus 99 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g---- 168 (287)
T 3rku_A 99 AEKIKPFIENLPQEFKDIDILVNNAGKAL------GSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSG---- 168 (287)
T ss_dssp GGGHHHHHHTSCGGGCSCCEEEECCCCCC------CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC----
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----
Confidence 99999999999999999999999999763 35677889999999999999999999999999999887765
Q ss_pred ceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 171 VAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 171 ~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||++||..+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 169 --~IV~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIr-vn~v~PG~v~T 223 (287)
T 3rku_A 169 --DIVNLGSIAGRDA---YPTGSIYCASKFAVGAFTDSLRKELINTKIR-VILIAPGLVET 223 (287)
T ss_dssp --EEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCE-EEEEEESCEES
T ss_pred --eEEEECChhhcCC---CCCCchHHHHHHHHHHHHHHHHHHhhhcCCE-EEEEeCCcCcC
Confidence 9999999998877 6888899999999999999999999999999 77999999874
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=262.95 Aligned_cols=192 Identities=18% Similarity=0.214 Sum_probs=172.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+++...+.++.++++|++|+++++++++++.+
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQ--VAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4788999999999999999999999999997 99999998888777777666678999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.+ ++||++||..+.
T Consensus 106 ~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~-----g~iv~isS~~~~ 173 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIV-------SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLG-----GTIITTASMSGH 173 (276)
T ss_dssp HHSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGT
T ss_pred HcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----cEEEEECchHhc
Confidence 999999999999987 35677889999999999999999999999999999887643 499999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+.. .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 174 ~~~~-~~~~~~Y~asKaa~~~l~~~la~e~~~~gIr-vn~v~PG~v~T 219 (276)
T 3r1i_A 174 IINI-PQQVSHYCTSKAAVVHLTKAMAVELAPHQIR-VNSVSPGYIRT 219 (276)
T ss_dssp SCCC-SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCS
T ss_pred ccCC-CCCcchHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEeeCCCcC
Confidence 5521 2356789999999999999999999999999 77999999975
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=263.11 Aligned_cols=186 Identities=19% Similarity=0.270 Sum_probs=167.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.. +.++.++++|++|+++++++++++.++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGAT--VIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888999876655544333 678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. +..++.+.+.++|++.+++|+.++++++++++|+|++++.+ ++||++||..+..
T Consensus 78 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~~~ 145 (247)
T 3rwb_A 78 TGGIDILVNNASIV-------PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKA-----GRVISIASNTFFA 145 (247)
T ss_dssp HSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCTHHHH
T ss_pred CCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-----cEEEEECchhhcc
Confidence 99999999999987 46678899999999999999999999999999999876521 4999999998887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 146 ~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 188 (247)
T 3rwb_A 146 G---TPNMAAYVAAKGGVIGFTRALATELGKYNIT-ANAVTPGLIES 188 (247)
T ss_dssp T---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred C---CCCchhhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcCcC
Confidence 7 6888999999999999999999999999999 77999999974
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=262.35 Aligned_cols=186 Identities=18% Similarity=0.241 Sum_probs=169.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++|++|||||++|||+++|++|+++|++ |++. +|+.+..+.+.+.++..+.++.++++|++|+++++++++++.+++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~--vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN--IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999997 6664 788777776666666667799999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..+..+
T Consensus 81 g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~~~ 147 (258)
T 3oid_A 81 GRLDVFVNNAASG-------VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGG------HIVSISSLGSIRY 147 (258)
T ss_dssp SCCCEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEEEEGGGTSB
T ss_pred CCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECchhhCCC
Confidence 9999999999976 35678889999999999999999999999999999987765 9999999988776
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 148 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 189 (258)
T 3oid_A 148 ---LENYTTVGVSKAALEALTRYLAVELSPKQII-VNAVSGGAIDT 189 (258)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEECCBCS
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEeeCCCcC
Confidence 6888999999999999999999999999999 77999999974
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=260.37 Aligned_cols=187 Identities=22% Similarity=0.316 Sum_probs=168.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAA--VAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888999877666655555555678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ | +||++||..+..
T Consensus 82 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~ 147 (247)
T 2jah_A 82 LGGLDILVNNAGIM-------LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-G------TVVQMSSIAGRV 147 (247)
T ss_dssp HSCCSEEEECCCCC-------CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGTC
T ss_pred cCCCCEEEECCCCC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C------EEEEEccHHhcC
Confidence 99999999999986 355677889999999999999999999999999998765 5 999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 148 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 190 (247)
T 2jah_A 148 N---VRNAAVYQATKFGVNAFSETLRQEVTERGVR-VVVIEPGTTDT 190 (247)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBSS
T ss_pred C---CCCCcHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEECCCCCC
Confidence 6 6788899999999999999999999999999 77999999874
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=265.38 Aligned_cols=186 Identities=22% Similarity=0.304 Sum_probs=167.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.. +.++.++++|++|+++++++++++.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCH--VLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999997 888999876655544333 66889999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||..+.
T Consensus 100 ~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~~~ 166 (277)
T 3gvc_A 100 AFGGVDKLVANAGVV-------HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGG------AIVNLSSLAGQ 166 (277)
T ss_dssp HHSSCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGT
T ss_pred HcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhc
Confidence 999999999999987 35677889999999999999999999999999999887765 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 167 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~t 210 (277)
T 3gvc_A 167 VA---VGGTGAYGMSKAGIIQLSRITAAELRSSGIR-SNTLLPAFVDT 210 (277)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cC---CCCchhHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeeCCccC
Confidence 77 6888899999999999999999999999999 77999999974
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=264.49 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=169.0
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..++++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+. .+.++.++++|++|++++++++++
T Consensus 20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAY--VVVADVNEDAAVRVANE---IGSKAFGVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHH
T ss_pred cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hCCceEEEEecCCCHHHHHHHHHH
Confidence 4456889999999999999999999999999997 88899987655554433 366899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||.
T Consensus 95 ~~~~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS~ 161 (277)
T 4dqx_A 95 TTAKWGRVDVLVNNAGFG-------TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGG------SIINTTSY 161 (277)
T ss_dssp HHHHHSCCCEEEECCCCC-------CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCE------EEEEECCG
T ss_pred HHHHcCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEECch
Confidence 999999999999999986 35677889999999999999999999999999999887764 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 162 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 208 (277)
T 4dqx_A 162 TATSA---IADRTAYVASKGAISSLTRAMAMDHAKEGIR-VNAVAPGTIDS 208 (277)
T ss_dssp GGTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred hhCcC---CCCChhHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcCcC
Confidence 88776 6888899999999999999999999999999 77999999975
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=262.50 Aligned_cols=189 Identities=22% Similarity=0.324 Sum_probs=160.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--C-CceeEEEecCCChHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--P-ERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+... + .++.++++|++|+++++++++
T Consensus 2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (250)
T 3nyw_A 2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYR--VVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK 79 (250)
T ss_dssp ---CCCCEEEEESTTSHHHHHHHHHHHHHTCE--EEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence 45678999999999999999999999999996 889999987777765544332 2 678999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|.|++++.| +||++||
T Consensus 80 ~~~~~~g~iD~lvnnAg~~~-------~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS 145 (250)
T 3nyw_A 80 DIHQKYGAVDILVNAAAMFM-------DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG------YIFNVAS 145 (250)
T ss_dssp HHHHHHCCEEEEEECCCCCC-------CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred HHHHhcCCCCEEEECCCcCC-------CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe------EEEEEcc
Confidence 99999999999999999863 4445 67889999999999999999999999999877654 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 146 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 193 (250)
T 3nyw_A 146 RAAKYG---FADGGIYGSTKFALLGLAESLYRELAPLGIR-VTTLCPGWVNT 193 (250)
T ss_dssp ----------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBCS
T ss_pred HHhcCC---CCCCcchHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCcccC
Confidence 998876 3457899999999999999999999999999 77999999975
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=265.11 Aligned_cols=188 Identities=20% Similarity=0.247 Sum_probs=168.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
-+++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA--VYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999997 899999987777766666666789999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhh--hhhcCCCCcccCceEEEEeccCcc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP--LLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++| .|++++.| +||++||..+
T Consensus 99 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g------~iV~isS~~~ 165 (279)
T 3sju_A 99 FGPIGILVNSAGRN-------GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG------RIVNIASTGG 165 (279)
T ss_dssp HCSCCEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE------EEEEECCGGG
T ss_pred cCCCcEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc------EEEEECChhh
Confidence 99999999999987 356788899999999999999999999999999 57766654 9999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 166 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 210 (279)
T 3sju_A 166 KQG---VMYAAPYTASKHGVVGFTKSVGFELAKTGIT-VNAVCPGYVET 210 (279)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEESSBCS
T ss_pred ccC---CCCChhHHHHHHHHHHHHHHHHHHHHhhCcE-EEEEeeCcccc
Confidence 877 6888899999999999999999999999999 77999999974
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=263.65 Aligned_cols=185 Identities=19% Similarity=0.210 Sum_probs=168.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++|++|||||++|||+++|++|++.|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.+++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK--ILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999997 8899999887777776666667889999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..+
T Consensus 80 g~iD~lVnnAG~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS~~~~~~ 146 (264)
T 3tfo_A 80 GRIDVLVNNAGVM-------PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG------QIINIGSIGALSV 146 (264)
T ss_dssp SCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTCC
T ss_pred CCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCe------EEEEEcCHHHccc
Confidence 9999999999987 46678899999999999999999999999999999887655 9999999998877
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|++||+|+++|+++++.|+ + ||+ +|+|+||.|++
T Consensus 147 ---~~~~~~Y~asKaal~~l~~~la~e~-~-gIr-vn~v~PG~v~T 186 (264)
T 3tfo_A 147 ---VPTAAVYCATKFAVRAISDGLRQES-T-NIR-VTCVNPGVVES 186 (264)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHC-S-SEE-EEEEEECCC--
T ss_pred ---CCCChhHHHHHHHHHHHHHHHHHhC-C-CCE-EEEEecCCCcC
Confidence 6888899999999999999999998 5 999 77999999974
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=263.33 Aligned_cols=190 Identities=17% Similarity=0.157 Sum_probs=172.3
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+.++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++++++++++++++
T Consensus 27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAH--VILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999997 999999998888877666666789999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+. +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..
T Consensus 105 ~~~-g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~ 170 (275)
T 4imr_A 105 EAI-APVDILVINASAQ-------INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG------RVVSIGSIN 170 (275)
T ss_dssp HHH-SCCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred HHh-CCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHH
Confidence 887 9999999999987 35678889999999999999999999999999999887664 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 171 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 216 (275)
T 4imr_A 171 QLRP---KSVVTAYAATKAAQHNLIQSQARDFAGDNVL-LNTLAPGLVDT 216 (275)
T ss_dssp GTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBCS
T ss_pred hCCC---CCCchhhHHHHHHHHHHHHHHHHHhcccCcE-EEEEEeccccC
Confidence 8765 5677789999999999999999999999999 77999999975
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=259.71 Aligned_cols=189 Identities=22% Similarity=0.259 Sum_probs=169.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecC--CChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDL--TVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl--s~~~~v~~~~~~ 100 (231)
..++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+... +.++.++.+|+ ++++++++++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGAT--VILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence 3578999999999999999999999999997 889999987777655444332 44889999999 999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||.
T Consensus 86 ~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~ 153 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLLG------DVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG------SLVFTSSS 153 (252)
T ss_dssp HHHHCSCCSEEEECCCCCC------CCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCG
T ss_pred HHHhCCCCCEEEECCccCC------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC------EEEEECCh
Confidence 9999999999999999853 35677889999999999999999999999999999887765 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|+++. |+ +|+|+||.+++
T Consensus 154 ~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~-ir-vn~v~PG~v~t 199 (252)
T 3f1l_A 154 VGRQG---RANWGAYAASKFATEGMMQVLADEYQQR-LR-VNCINPGGTRT 199 (252)
T ss_dssp GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHTTTT-CE-EEEEECCSBSS
T ss_pred hhccC---CCCCchhHHHHHHHHHHHHHHHHHhcCC-cE-EEEEecCcccC
Confidence 98877 6888899999999999999999999987 99 77999999975
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=262.48 Aligned_cols=191 Identities=17% Similarity=0.222 Sum_probs=166.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-------hhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+.+..+. ..+.....+.++.++++|++|++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGAN--VAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 5789999999999999999999999999996 9999998765332 233334447789999999999999999
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||+
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~ 146 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIW-------LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP------HILT 146 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCC-------CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC------EEEE
T ss_pred HHHHHHHHcCCCCEEEECCCccc-------CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc------eEEE
Confidence 99999999999999999999873 5677889999999999999999999999999999887765 9999
Q ss_pred eccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC-CCCC
Q 026924 177 LSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR-HCRY 231 (231)
Q Consensus 177 iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg-~~~~ 231 (231)
+||..+..+. +.+++..|++||+|+++|+++++.|++++||+ +|+|+|| .+++
T Consensus 147 isS~~~~~~~-~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-vn~v~PG~~v~T 200 (274)
T 3e03_A 147 LAPPPSLNPA-WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVA-INALWPRTVIAT 200 (274)
T ss_dssp CCCCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEECSBCBCC
T ss_pred ECChHhcCCC-CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEE-EEEEECCccccc
Confidence 9998876441 02456789999999999999999999999999 7799999 5764
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=260.38 Aligned_cols=193 Identities=22% Similarity=0.250 Sum_probs=172.3
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+...++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|+++++++++++++
T Consensus 22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGAR--VVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred chhhccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 3334678999999999999999999999999997 88999998877777666666678899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||.
T Consensus 100 ~~~~~g~id~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~ 167 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGVGW------FGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG------HIINISSL 167 (262)
T ss_dssp HHHHHSCCSEEEECCCCCC------CSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC------EEEEECSS
T ss_pred HHHhcCCCCEEEECCCccC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------eEEEEech
Confidence 9999999999999999843 45678889999999999999999999999999999887765 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 168 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-v~~v~PG~v~t 214 (262)
T 3rkr_A 168 AGKNP---VADGAAYTASKWGLNGLMTSAAEELRQHQVR-VSLVAPGSVRT 214 (262)
T ss_dssp CSSCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCC--
T ss_pred hhcCC---CCCCchHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCCCcC
Confidence 98876 6888899999999999999999999999999 77999999874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=259.01 Aligned_cols=197 Identities=18% Similarity=0.209 Sum_probs=159.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+...+.. +.++.++++|++|+++++++++++.
T Consensus 2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAK 76 (257)
T ss_dssp --CCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHH
Confidence 35788999999999999999999999999997 888999987766644433 5688999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||...... ......+.+.++|++.+++|+.+++.++++++|.|+++........++||++||..+
T Consensus 77 ~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~ 153 (257)
T 3tpc_A 77 QEFGHVHGLVNCAGTAPGEK---ILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA 153 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCC---SEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred HHcCCCCEEEECCCCCCCCc---cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence 99999999999999864110 111223678899999999999999999999999998752111112359999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 154 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 198 (257)
T 3tpc_A 154 FDG---QIGQAAYAASKGGVAALTLPAARELARFGIR-VVTIAPGIFDT 198 (257)
T ss_dssp HHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBSC
T ss_pred ccC---CCCCcchHHHHHHHHHHHHHHHHHHHHcCeE-EEEEEeCCCCC
Confidence 877 6788899999999999999999999999999 77999999974
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=261.61 Aligned_cols=190 Identities=19% Similarity=0.233 Sum_probs=167.3
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.+..+++||++|||||++|||+++|++|+++|++ |++.+++ .+..+.+.++++..+.++.++++|++|+++++++++
T Consensus 11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAK--VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3445789999999999999999999999999997 7776654 444555666666667899999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+. ++||++||
T Consensus 89 ~~~~~~g~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVV-------SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG--------GRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT--------CEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--------CeEEEEeC
Confidence 9999999999999999987 35678899999999999999999999999999999763 39999999
Q ss_pred Ccc-ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVG-SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~-~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ ..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 154 ~~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 202 (270)
T 3is3_A 154 NTSKDFS---VPKHSLYSGSKGAVDSFVRIFSKDCGDKKIT-VNAVAPGGTVT 202 (270)
T ss_dssp TTTTTCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred chhccCC---CCCCchhHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeCCccC
Confidence 873 334 6788899999999999999999999999999 77999999874
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=265.20 Aligned_cols=192 Identities=17% Similarity=0.158 Sum_probs=165.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+... +..+.++++|++|+++++++++++.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYS--VVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 999999987776655544333 3345899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ .++||++||..+
T Consensus 107 ~~~g~iD~lvnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~----~g~IV~isS~~~ 176 (281)
T 4dry_A 107 AEFARLDLLVNNAGSNV------PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR----GGRIINNGSISA 176 (281)
T ss_dssp HHHSCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC----CEEEEEECCGGG
T ss_pred HHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC----CcEEEEECCHHh
Confidence 99999999999999864 34678899999999999999999999999999999876510 149999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 177 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 221 (281)
T 4dry_A 177 QTP---RPNSAPYTATKHAITGLTKSTALDGRMHDIA-CGQIDIGNAAT 221 (281)
T ss_dssp TCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEEECBCC
T ss_pred CCC---CCCChhHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEECcCcC
Confidence 877 6888999999999999999999999999999 77999999875
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=264.75 Aligned_cols=190 Identities=15% Similarity=0.200 Sum_probs=170.0
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-hcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
...++||++|||||++|||+++|++|+++|++ |++++|+.+..+...+.+ ...+.++.++++|++|+++++++++++
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCH--TVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 34689999999999999999999999999996 889999877666644433 334678999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.| +||++||..
T Consensus 100 ~~~~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~ 166 (277)
T 4fc7_A 100 LKEFGRIDILINCAAGN-------FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG------VIVNITATL 166 (277)
T ss_dssp HHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE------EEEEECCSH
T ss_pred HHHcCCCCEEEECCcCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECchh
Confidence 99999999999999976 35678889999999999999999999999999999776554 999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 167 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~t 212 (277)
T 4fc7_A 167 GNRG---QALQVHAGSAKAAVDAMTRHLAVEWGPQNIR-VNSLAPGPISG 212 (277)
T ss_dssp HHHT---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBSS
T ss_pred hCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEECCEec
Confidence 8877 6788899999999999999999999999999 77999999874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=263.75 Aligned_cols=190 Identities=17% Similarity=0.212 Sum_probs=168.1
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+++++|++|||||++|||+++|++|+++|++ |++++|+ .+..+.+.+.+... +.++.++++|++|++++++++++
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGAN--IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 34678999999999999999999999999997 8888884 44445454444433 56899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||.
T Consensus 98 ~~~~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~ 164 (281)
T 3v2h_A 98 VADRFGGADILVNNAGVQ-------FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG------RIINIASA 164 (281)
T ss_dssp HHHHTSSCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred HHHHCCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEECCc
Confidence 999999999999999986 35678889999999999999999999999999999887665 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 165 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~t 211 (281)
T 3v2h_A 165 HGLVA---SPFKSAYVAAKHGIMGLTKTVALEVAESGVT-VNSICPGYVLT 211 (281)
T ss_dssp GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ccccC---CCCchHHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEECCCCcC
Confidence 88877 6888899999999999999999999999999 77999999874
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=261.22 Aligned_cols=186 Identities=17% Similarity=0.245 Sum_probs=162.8
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+..++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+. ..++.++++|++|++++++++++
T Consensus 9 ~m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 80 (266)
T 3p19_A 9 QMGRGSMKKLVVITGASSGIGEAIARRFSEEGHP--LLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITR 80 (266)
T ss_dssp ------CCCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHH
Confidence 3445678999999999999999999999999997 888899765433321 23788999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||.
T Consensus 81 ~~~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~IV~isS~ 147 (266)
T 3p19_A 81 AEKIYGPADAIVNNAGMM-------LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG------TIINISSI 147 (266)
T ss_dssp HHHHHCSEEEEEECCCCC-------CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCG
T ss_pred HHHHCCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcCh
Confidence 999999999999999987 35677888999999999999999999999999999887765 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 148 ~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 194 (266)
T 3p19_A 148 AGKKT---FPDHAAYCGTKFAVHAISENVREEVAASNVR-VMTIAPSAVKT 194 (266)
T ss_dssp GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBSS
T ss_pred hhCCC---CCCCchHHHHHHHHHHHHHHHHHHhcccCcE-EEEEeeCcccc
Confidence 98876 6888899999999999999999999999999 77999999975
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=262.25 Aligned_cols=189 Identities=21% Similarity=0.268 Sum_probs=164.0
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..|.+++|++|||||++|||+++|++|+++|++ |++. .++.+..+.+.+.....+.++.++++|++|++++++++++
T Consensus 21 ~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 21 QSMMETNKVAIVTGASRGIGAAIAARLASDGFT--VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp ------CCEEEEESCSSHHHHHHHHHHHHHTCE--EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 335678999999999999999999999999997 6665 4555555666666666678999999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||+. +..++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++||.
T Consensus 99 ~~~~~g~iD~lvnnAG~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~isS~ 163 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIM-------PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG--------GRIINMSTS 163 (267)
T ss_dssp HHHHHSCEEEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCT
T ss_pred HHHHcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--------CeEEEEeCh
Confidence 999999999999999987 46678889999999999999999999999999999753 399999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 164 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 210 (267)
T 3u5t_A 164 QVGLL---HPSYGIYAAAKAGVEAMTHVLSKELRGRDIT-VNAVAPGPTAT 210 (267)
T ss_dssp HHHHC---CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCE-EEEEEECCBC-
T ss_pred hhccC---CCCchHHHHHHHHHHHHHHHHHHHhhhhCCE-EEEEEECCCcC
Confidence 88776 6888899999999999999999999999999 77999999974
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=259.81 Aligned_cols=183 Identities=22% Similarity=0.343 Sum_probs=165.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++++|+++..+.+.+.. +.++.++++|++|+++++++++++.++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAE--VLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 899999876655544433 568999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++. ++||++||..+..
T Consensus 80 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~isS~~~~~ 144 (255)
T 4eso_A 80 LGAIDLLHINAGVS-------ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--------GSIVFTSSVADEG 144 (255)
T ss_dssp HSSEEEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCGGGSS
T ss_pred hCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--------CEEEEECChhhcC
Confidence 99999999999987 46678899999999999999999999999999999763 3999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 145 ~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 187 (255)
T 4eso_A 145 G---HPGMSVYSASKAALVSFASVLAAELLPRGIR-VNSVSPGFIDT 187 (255)
T ss_dssp B---CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCE-EEEEEECSBCC
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEecCcccC
Confidence 7 6888999999999999999999999999999 77999999874
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=266.72 Aligned_cols=189 Identities=19% Similarity=0.265 Sum_probs=166.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC------------CccchhhhhhcCCCceeEEEecCCChH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTVES 92 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~Dls~~~ 92 (231)
+++||++|||||++|||+++|++|+++|++ |++++++.. .++...+.....+.++.++++|++|++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGAD--IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCe--EEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 578999999999999999999999999997 777777521 122233344455778999999999999
Q ss_pred HHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCce
Q 026924 93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA 172 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~ 172 (231)
+++++++++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.+ +
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-----g 188 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGIS-------NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG-----G 188 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSC-----E
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-----C
Confidence 99999999999999999999999987 35677889999999999999999999999999999876533 5
Q ss_pred EEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 173 VVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 173 ~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||++||..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 189 ~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 243 (317)
T 3oec_A 189 SVIFVSSTVGLRG---APGQSHYAASKHGVQGLMLSLANEVGRHNIR-VNSVNPGAVNT 243 (317)
T ss_dssp EEEEECCGGGSSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBSS
T ss_pred EEEEECcHHhcCC---CCCCcchHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCcccC
Confidence 9999999998877 6888999999999999999999999999999 77999999974
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=258.62 Aligned_cols=187 Identities=19% Similarity=0.275 Sum_probs=167.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.. +.++.++++|++|+++++++++++.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGAT--VAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999997 888999876655544333 56789999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.+ ++||++||..+.
T Consensus 79 ~~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~~ 146 (259)
T 4e6p_A 79 HAGGLDILVNNAALF-------DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRG-----GKIINMASQAGR 146 (259)
T ss_dssp HSSSCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGT
T ss_pred HcCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEECChhhc
Confidence 999999999999986 35678899999999999999999999999999999876522 499999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 147 ~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 190 (259)
T 4e6p_A 147 RG---EALVAIYCATKAAVISLTQSAGLDLIKHRIN-VNAIAPGVVDG 190 (259)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCS
T ss_pred cC---CCCChHHHHHHHHHHHHHHHHHHHhhhcCCE-EEEEEECCCcc
Confidence 77 6788899999999999999999999999999 77999999874
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=259.19 Aligned_cols=195 Identities=22% Similarity=0.335 Sum_probs=168.2
Q ss_pred ccccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-hcCCCceeEEEecCCChHHHHH
Q 026924 18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 18 ~~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
.+..+..++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ ...+.++.++.+|+++++++++
T Consensus 11 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~ 88 (267)
T 1vl8_A 11 HHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKK 88 (267)
T ss_dssp ------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred CCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 4445666889999999999999999999999999997 888999876655544433 3336688999999999999999
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||+
T Consensus 89 ~~~~~~~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~ 155 (267)
T 1vl8_A 89 LLEAVKEKFGKLDTVVNAAGIN-------RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP------SIIN 155 (267)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC------EEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEE
Confidence 9999999999999999999986 35677888999999999999999999999999999887655 9999
Q ss_pred eccCc-cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 177 LSARV-GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 177 iss~~-~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||.. +..+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 156 isS~~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 207 (267)
T 1vl8_A 156 IGSLTVEEVT---MPNISAYAASKGGVASLTKALAKEWGRYGIR-VNVIAPGWYRT 207 (267)
T ss_dssp ECCGGGTCCC---SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCS
T ss_pred ECCcchhccC---CCCChhHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeccCcc
Confidence 99988 6655 6778899999999999999999999999999 77999999874
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=260.26 Aligned_cols=191 Identities=24% Similarity=0.290 Sum_probs=167.6
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+..++++||++|||||++|||+++|++|+++|++ |++++++. +..+.+.++++..+.++.++.+|++|+++++++++
T Consensus 24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAA--VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3445789999999999999999999999999997 77776654 44555566666667899999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++. ++||+++|
T Consensus 102 ~~~~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--------g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIW-------HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG--------GRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT--------CEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--------CEEEEEeC
Confidence 9999999999999999987 35678899999999999999999999999999999653 39999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+.... .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 167 ~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gIr-vn~v~PG~v~T 215 (271)
T 3v2g_A 167 NLAELVP--WPGISLYSASKAALAGLTKGLARDLGPRGIT-VNIVHPGSTDT 215 (271)
T ss_dssp GGGTCCC--STTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred hhhccCC--CCCchHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEecCCCcC
Confidence 7765542 5778899999999999999999999999999 77999999974
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-39 Score=262.08 Aligned_cols=187 Identities=18% Similarity=0.229 Sum_probs=159.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++||++|||||++|||+++|++|+++|++ |++.+|+.+..+.+.+ ..+.++.++++|++|+++++++++++.
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAI--VGLHGTREDKLKEIAA---DLGKDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HhCCceEEEEeecCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999996 8888998765554433 336789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+
T Consensus 97 ~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~Iv~isS~~~ 163 (266)
T 3grp_A 97 REMEGIDILVNNAGIT-------RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYG------RIINITSIVG 163 (266)
T ss_dssp HHHTSCCEEEECCCCC------------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCC--
T ss_pred HHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc------EEEEECCHHH
Confidence 9999999999999987 35677888999999999999999999999999999887665 9999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 164 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~-vn~v~PG~v~t 208 (266)
T 3grp_A 164 VVG---NPGQTNYCAAKAGLIGFSKALAQEIASRNIT-VNCIAPGFIKS 208 (266)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred cCC---CCCchhHHHHHHHHHHHHHHHHHHhhhhCcE-EEEEeeCcCCC
Confidence 877 6788899999999999999999999999999 77999999874
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=259.64 Aligned_cols=191 Identities=17% Similarity=0.250 Sum_probs=167.7
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+... +.++.++++|++|++++++++++
T Consensus 8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CccCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 34678999999999999999999999999997 888999876666554444332 56889999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||.
T Consensus 86 ~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~ 153 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG------MVVNTASV 153 (267)
T ss_dssp HHHHHSCCSEEEECCCCCC------CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCG
T ss_pred HHHHcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcch
Confidence 9999999999999999763 22567888999999999999999999999999999876655 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 154 ~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 200 (267)
T 1iy8_A 154 GGIRG---IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR-INAIAPGAIWT 200 (267)
T ss_dssp GGTSB---CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred hhccC---CCCCccHHHHHHHHHHHHHHHHHHHHhcCeE-EEEEEeCCCcC
Confidence 88776 6788899999999999999999999999999 77999999874
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-39 Score=259.41 Aligned_cols=187 Identities=24% Similarity=0.298 Sum_probs=167.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||++|||+++|++|+++|++ |++.+++ .+..+.+.+.+...+.++.++++|++|+++++++++++.++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYN--VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999997 7776664 45555566666666778999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..+..
T Consensus 80 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~ 146 (246)
T 3osu_A 80 FGSLDVLVNNAGIT-------RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG------AIINLSSVVGAV 146 (246)
T ss_dssp HSCCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHH
T ss_pred cCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcchhhcC
Confidence 99999999999987 35677889999999999999999999999999999887665 999999998887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 147 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 189 (246)
T 3osu_A 147 G---NPGQANYVATKAGVIGLTKSAARELASRGIT-VNAVAPGFIVS 189 (246)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBGG
T ss_pred C---CCCChHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEECCCcC
Confidence 7 6888899999999999999999999999999 77999999864
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=256.80 Aligned_cols=182 Identities=19% Similarity=0.164 Sum_probs=160.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.. +.++.++++|++|+++++++++++.+++|
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQ--VSMMGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999997 999999877666655444 23689999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+
T Consensus 77 ~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~- 141 (235)
T 3l6e_A 77 LPELVLHCAGTG-------EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-------GVLANVLSSAAQVG- 141 (235)
T ss_dssp SCSEEEEECCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------EEEEEECCEECCSS-
T ss_pred CCcEEEECCCCC-------CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CEEEEEeCHHhcCC-
Confidence 999999999986 356778889999999999999999999999999998765 39999999988877
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 142 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 183 (235)
T 3l6e_A 142 --KANESLYCASKWGMRGFLESLRAELKDSPLR-LVNLYPSGIRS 183 (235)
T ss_dssp --CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEE-EEEEEEEEECC
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHhhccCCE-EEEEeCCCccC
Confidence 6888899999999999999999999999999 77999999874
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=258.66 Aligned_cols=189 Identities=18% Similarity=0.230 Sum_probs=165.5
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
..++++||++|||||++|||+++|++|+++|++ |++++|+ +..+...+.+...+.++.++++|++|+++++++.+.
T Consensus 25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~- 100 (273)
T 3uf0_A 25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAH--VLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE- 100 (273)
T ss_dssp CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-
Confidence 345789999999999999999999999999997 8888865 334444455555577899999999999999999554
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.| +||++||..
T Consensus 101 ~~~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS~~ 167 (273)
T 3uf0_A 101 LAATRRVDVLVNNAGII-------ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG------RIVTIASML 167 (273)
T ss_dssp HHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred HHhcCCCcEEEECCCCC-------CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcchH
Confidence 45679999999999987 35678899999999999999999999999999999887765 999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 168 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 213 (273)
T 3uf0_A 168 SFQG---GRNVAAYAASKHAVVGLTRALASEWAGRGVG-VNALAPGYVVT 213 (273)
T ss_dssp GTSC---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred hcCC---CCCChhHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEEeCCCcC
Confidence 8877 6888899999999999999999999999999 77999999874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=260.74 Aligned_cols=189 Identities=22% Similarity=0.240 Sum_probs=168.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc-cchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
..+++||++|||||++|||+++|++|+++|++ |++++|+.+.. +.+.++.+..+.++.++++|++|+++++++++++
T Consensus 42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGAN--IAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 34678999999999999999999999999997 88889887543 3345555566779999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|+|++. ++||++||..
T Consensus 120 ~~~~g~iD~lvnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--------g~iv~isS~~ 185 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQY------PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG--------DVIINTASIV 185 (291)
T ss_dssp HHHHSSCCEEEECCCCCC------CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT--------CEEEEECCTH
T ss_pred HHHcCCCCEEEECCCCcC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--------CEEEEEechH
Confidence 999999999999999764 45678889999999999999999999999999999653 2999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 186 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 231 (291)
T 3ijr_A 186 AYEG---NETLIDYSATKGAIVAFTRSLSQSLVQKGIR-VNGVAPGPIWT 231 (291)
T ss_dssp HHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred hcCC---CCCChhHHHHHHHHHHHHHHHHHHHhhcCEE-EEEEeeCCCcC
Confidence 8877 6788899999999999999999999999999 77999999874
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=256.81 Aligned_cols=189 Identities=21% Similarity=0.224 Sum_probs=172.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++++|++|||||++|||+++|++|+++|++ |++++|+++..+.+.+.++..+.++.++++|++|+++++++++++.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGAT--VVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 99999998877777766666678999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+.
T Consensus 79 ~~~~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~ 145 (247)
T 3lyl_A 79 ENLAIDILVNNAGIT-------RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG------RIISIGSVVGS 145 (247)
T ss_dssp TTCCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHH
T ss_pred HcCCCCEEEECCCCC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhhc
Confidence 999999999999987 35677889999999999999999999999999999887665 99999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 146 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 189 (247)
T 3lyl_A 146 AG---NPGQTNYCAAKAGVIGFSKSLAYEVASRNIT-VNVVAPGFIAT 189 (247)
T ss_dssp HC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cC---CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeE-EEEEeeCcEec
Confidence 77 6888899999999999999999999999999 77999999874
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=256.31 Aligned_cols=189 Identities=22% Similarity=0.298 Sum_probs=168.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+++..+.+.+.+...+.++.++++|++|+++++++++++.+
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88899987766665555544466899999999999999999999999
Q ss_pred Hc-CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 104 KY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+
T Consensus 83 ~~~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~ 149 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIV-------IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG------NVVFISSVSG 149 (260)
T ss_dssp HTTTCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE------EEEEECCGGG
T ss_pred HcCCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhh
Confidence 99 8999999999976 35567888999999999999999999999999999877654 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|++||+++++++++++.|++++||+ +|+|+||.+++
T Consensus 150 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 194 (260)
T 2ae2_A 150 ALA---VPYEAVYGATKGAMDQLTRCLAFEWAKDNIR-VNGVGPGVIAT 194 (260)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEECSBCS
T ss_pred ccC---CCCcchHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCCCCC
Confidence 766 6778899999999999999999999999999 77999999874
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=261.48 Aligned_cols=193 Identities=19% Similarity=0.254 Sum_probs=160.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|++|||||++|||+++|++|+++|++ |+++++ +.+..+.+.+.+...+.++.++++|++|+++++++++++.+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFD--IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCe--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888775 55555555555566677999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.... ...++.+.+.++|++.+++|+.++++++++++|.|.+++.. ..++||++||..+.
T Consensus 104 ~~g~iD~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~---~~g~Iv~isS~~~~ 175 (280)
T 4da9_A 104 EFGRIDCLVNNAGIASI-----VRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR---ASRSIINITSVSAV 175 (280)
T ss_dssp HHSCCCEEEEECC-----------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC---CCEEEEEECCC---
T ss_pred HcCCCCEEEECCCcccc-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC---CCCEEEEEcchhhc
Confidence 99999999999997310 35678889999999999999999999999999999875410 11499999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 176 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 219 (280)
T 4da9_A 176 MT---SPERLDYCMSKAGLAAFSQGLALRLAETGIA-VFEVRPGIIRS 219 (280)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCBCC
T ss_pred cC---CCCccHHHHHHHHHHHHHHHHHHHHHHhCcE-EEEEeecCCcC
Confidence 77 6888899999999999999999999999999 77999999874
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=259.62 Aligned_cols=188 Identities=16% Similarity=0.139 Sum_probs=164.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+ +.++.++++|++|+++++++++++.++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYG--VALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999997 888999876655544433 468899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|.|++++.+ .++||++||..+..
T Consensus 100 ~g~iD~lVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~----~g~IV~isS~~~~~ 169 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGA------PAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR----GGRIINNGSISATS 169 (272)
T ss_dssp HSCCCEEEECCCCCC------CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC----CEEEEEECCSSTTS
T ss_pred cCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC----CcEEEEECchhhcC
Confidence 999999999999864 34678899999999999999999999999999999876520 14999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 170 ~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 212 (272)
T 4dyv_A 170 P---RPYSAPYTATKHAITGLTKSTSLDGRVHDIA-CGQIDIGNADT 212 (272)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEEEECC-
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhCccCEE-EEEEEECcccC
Confidence 7 6788899999999999999999999999999 77999999874
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=260.89 Aligned_cols=188 Identities=20% Similarity=0.200 Sum_probs=166.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC--CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++||++|||||++|||+++|++|+++|++ |++.+|+. ...+.+.++.+..+.++.++++|++|+++++++++++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGAD--VAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88888763 2334455555666789999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||... ...++.+.+.++|++.+++|+.++++++++++|.|.++ ++||++||..
T Consensus 123 ~~~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--------g~Iv~isS~~ 188 (294)
T 3r3s_A 123 REALGGLDILALVAGKQT------AIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG--------ASIITTSSIQ 188 (294)
T ss_dssp HHHHTCCCEEEECCCCCC------CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT--------CEEEEECCGG
T ss_pred HHHcCCCCEEEECCCCcC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--------CEEEEECChh
Confidence 999999999999999763 35678889999999999999999999999999999653 2999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 189 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~t 234 (294)
T 3r3s_A 189 AYQP---SPHLLDYAATKAAILNYSRGLAKQVAEKGIR-VNIVAPGPIWT 234 (294)
T ss_dssp GTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred hccC---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCcCcc
Confidence 8776 6888899999999999999999999999999 77999999874
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=261.65 Aligned_cols=189 Identities=14% Similarity=0.192 Sum_probs=172.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGAR--LVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999996 999999988777776666666778999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ ++||++||..+..
T Consensus 106 ~g~id~lvnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----g~iv~isS~~~~~ 173 (301)
T 3tjr_A 106 LGGVDVVFSNAGIV-------VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTG-----GHIAFTASFAGLV 173 (301)
T ss_dssp HSSCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC-----EEEEEECCGGGTS
T ss_pred CCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-----cEEEEeCchhhcC
Confidence 99999999999987 35678889999999999999999999999999999876522 4999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 174 ~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 216 (301)
T 3tjr_A 174 P---NAGLGTYGVAKYGVVGLAETLAREVKPNGIG-VSVLCPMVVET 216 (301)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEECCSCCCS
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEECCcccc
Confidence 7 7888999999999999999999999999999 77999999975
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=257.89 Aligned_cols=189 Identities=19% Similarity=0.208 Sum_probs=168.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++++++++++++++.++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888899876666655555555678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||..+..
T Consensus 82 ~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~ 149 (262)
T 1zem_A 82 FGKIDFLFNNAGYQG------AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG------RIVNTASMAGVK 149 (262)
T ss_dssp HSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHS
T ss_pred hCCCCEEEECCCCCC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhcc
Confidence 999999999999752 24567888999999999999999999999999999876654 999999988876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 150 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 192 (262)
T 1zem_A 150 G---PPNMAAYGTSKGAIIALTETAALDLAPYNIR-VNAISPGYMGP 192 (262)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred C---CCCCchHHHHHHHHHHHHHHHHHHHHhhCeE-EEEEecCCcCc
Confidence 6 6778899999999999999999999999999 77999999874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=254.74 Aligned_cols=192 Identities=17% Similarity=0.246 Sum_probs=167.2
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEee-cCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.+....++|++|||||++|||+++|++|+++|++ |++.+ ++....+...+.....+.++.++.+|++|+++++++++
T Consensus 6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (256)
T 3ezl_A 6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR--VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD 83 (256)
T ss_dssp -------CEEEEETTTTSHHHHHHHHHHHHTTEE--EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHH
Confidence 3445678999999999999999999999999997 76666 66666666666666667789999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||
T Consensus 84 ~~~~~~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS 150 (256)
T 3ezl_A 84 KVKAEVGEIDVLVNNAGIT-------RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG------RIINISS 150 (256)
T ss_dssp HHHHHTCCEEEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred HHHHhcCCCCEEEECCCCC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcc
Confidence 9999999999999999987 35677888999999999999999999999999999887665 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 151 ~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 198 (256)
T 3ezl_A 151 VNGQKG---QFGQTNYSTAKAGIHGFTMSLAQEVATKGVT-VNTVSPGYIGT 198 (256)
T ss_dssp CCGGGS---CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred hhhccC---CCCCcccHHHHHHHHHHHHHHHHHHHHhCCE-EEEEEECcccC
Confidence 998877 6888999999999999999999999999999 67999999974
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=260.66 Aligned_cols=187 Identities=16% Similarity=0.199 Sum_probs=160.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC---CccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+++++|++|||||++|||+++|++|+++|++ |++.+|+.. ..+.+.+.+...+.++.++++|++|++++++++++
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVN--LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCE--EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4788999999999999999999999999997 888776543 33444455555577899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++||.
T Consensus 85 ~~~~~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--------g~iv~isS~ 149 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKV-------LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN--------GHIITIATS 149 (262)
T ss_dssp HHHHHCSEEEEEECCCCC-------CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE--------EEEEEECCC
T ss_pred HHHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--------CEEEEEech
Confidence 999999999999999987 35678889999999999999999999999999999442 499999998
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 150 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 196 (262)
T 3ksu_A 150 LLAAY---TGFYSTYAGNKAPVEHYTRAASKELMKQQIS-VNAIAPGPMDT 196 (262)
T ss_dssp HHHHH---HCCCCC-----CHHHHHHHHHHHHTTTTTCE-EEEEEECCCCT
T ss_pred hhccC---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEeeCCCcC
Confidence 87776 6778899999999999999999999999999 77999999975
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=256.88 Aligned_cols=187 Identities=20% Similarity=0.266 Sum_probs=165.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++||++|||||++|||+++|++|+++|++ |++. +++.+..+...+.++..+.++.++++|++|+++++++++++.
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGAN--VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 7666 555555555555666667789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||... ...++.+.+.++|++.+++|+.++++++++++|.|++. ++||++||..+
T Consensus 82 ~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~isS~~~ 147 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLI------ARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG--------GAIVTFSSQAG 147 (259)
T ss_dssp HHHCSEEEEEECCCCCC------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHH
T ss_pred HHhCCCCEEEECCCccC------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CEEEEEcCHHh
Confidence 99999999999999763 45678889999999999999999999999999999762 49999999887
Q ss_pred c-cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 S-IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. .+ .++...|++||+|+++|+++++.|++++ |+ +|+|+||.|++
T Consensus 148 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~-vn~v~PG~v~T 192 (259)
T 3edm_A 148 RDGG---GPGALAYATSKGAVMTFTRGLAKEVGPK-IR-VNAVCPGMIST 192 (259)
T ss_dssp HHCC---STTCHHHHHHHHHHHHHHHHHHHHHTTT-CE-EEEEEECCBCC
T ss_pred ccCC---CCCcHHHHHHHHHHHHHHHHHHHHHCCC-CE-EEEEEECCCcC
Confidence 7 44 6788899999999999999999999987 99 77999999875
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=253.95 Aligned_cols=186 Identities=20% Similarity=0.320 Sum_probs=163.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++|++|||||++|||++++++|+++|++ |++++|+. +..+. .++..+.++.++++|++|+++++++++++.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 88889987 43332 333346689999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+
T Consensus 78 ~~~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~ 144 (249)
T 2ew8_A 78 STFGRCDILVNNAGIY-------PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTY 144 (249)
T ss_dssp HHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred HHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhh
Confidence 9999999999999976 34567888999999999999999999999999999876654 9999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 145 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 189 (249)
T 2ew8_A 145 WLK---IEAYTHYISTKAANIGFTRALASDLGKDGIT-VNAIAPSLVRT 189 (249)
T ss_dssp GSC---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCC--
T ss_pred ccC---CCCchhHHHHHHHHHHHHHHHHHHHHhcCcE-EEEEecCcCcC
Confidence 766 6788899999999999999999999999999 77999999874
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=259.81 Aligned_cols=190 Identities=20% Similarity=0.233 Sum_probs=160.6
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC------------CccchhhhhhcCCCceeEEEecCCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTV 90 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~Dls~ 90 (231)
..+++||++|||||++|||+++|++|+++|++ |++++|+.. ..+...+.....+.++.++++|++|
T Consensus 8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGAD--IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD 85 (278)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 35789999999999999999999999999997 888888732 2222333344456789999999999
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccC
Q 026924 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD 170 (231)
Q Consensus 91 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (231)
+++++++++++.+++|++|+||||||+.. ... +.++|++.+++|+.++++++++++|+|.+++.+
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---- 150 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAP-------MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTG---- 150 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCC-------CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC----
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC----
Confidence 99999999999999999999999999763 111 478999999999999999999999999876532
Q ss_pred ceEEEEeccCccccCC-CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 171 VAVVANLSARVGSIGD-NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 171 ~~~iv~iss~~~~~~~-~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||++||..+..+. .+.++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 151 -g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 210 (278)
T 3sx2_A 151 -GSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIR-VNSIHPSGVET 210 (278)
T ss_dssp -EEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCBSS
T ss_pred -cEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcE-EEEEecCCccC
Confidence 599999999887662 112667789999999999999999999999999 77999999974
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=256.39 Aligned_cols=190 Identities=16% Similarity=0.237 Sum_probs=167.6
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+... +.++.++++|++|+++++++++++
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAH--IVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 45678999999999999999999999999996 888999876655554444332 568899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..
T Consensus 80 ~~~~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~ 146 (263)
T 3ai3_A 80 RSSFGGADILVNNAGTG-------SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG------AIIHNASIC 146 (263)
T ss_dssp HHHHSSCSEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred HHHcCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchh
Confidence 99999999999999976 34567788999999999999999999999999999876554 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|++||+++++++++++.|++++||+ +|+|+||.+++
T Consensus 147 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 192 (263)
T 3ai3_A 147 AVQP---LWYEPIYNVTKAALMMFSKTLATEVIKDNIR-VNCINPGLILT 192 (263)
T ss_dssp GTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred hcCC---CCCcchHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCcccC
Confidence 8766 6778899999999999999999999999999 77999999874
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-38 Score=256.96 Aligned_cols=190 Identities=23% Similarity=0.298 Sum_probs=169.0
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.
T Consensus 16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999997 8889998776666555555556789999999999999999999999
Q ss_pred HHc-CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..
T Consensus 94 ~~~~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~ 160 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGVV-------IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIA 160 (273)
T ss_dssp HHTTSCCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE------EEEEECCGG
T ss_pred HHcCCCCcEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHh
Confidence 999 9999999999986 34567788999999999999999999999999999876654 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 161 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 206 (273)
T 1ae1_A 161 GFSA---LPSVSLYSASKGAINQMTKSLACEWAKDNIR-VNSVAPGVILT 206 (273)
T ss_dssp GTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBC-
T ss_pred hcCC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEEeCCCcC
Confidence 8766 6788899999999999999999999999999 77999999874
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=254.82 Aligned_cols=187 Identities=22% Similarity=0.319 Sum_probs=166.3
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||++|||++++++|+++|++ |++++| +.+..+.+.+.+...+.++.++++|++|+++++++++++.++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGAN--VVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999997 888888 655555555555555678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..
T Consensus 80 ~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~ 146 (246)
T 2uvd_A 80 FGQVDILVNNAGVT-------KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG------RIVNIASVVGVT 146 (246)
T ss_dssp HSCCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHH
T ss_pred cCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECCHHhcC
Confidence 99999999999976 35677889999999999999999999999999999876654 999999998876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 147 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 189 (246)
T 2uvd_A 147 G---NPGQANYVAAKAGVIGLTKTSAKELASRNIT-VNAIAPGFIAT 189 (246)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBGG
T ss_pred C---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeccccC
Confidence 6 6778899999999999999999999999999 77999999864
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=250.56 Aligned_cols=190 Identities=23% Similarity=0.327 Sum_probs=169.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecC--CChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDL--TVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl--s~~~~v~~~~~~ 100 (231)
..++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+ .++.++.+|+ ++++++++++++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGAS--VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 4678999999999999999999999999997 8999999887777665554444 5677777777 999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+.++++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|+|++++.+ +||++||.
T Consensus 88 ~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~ 155 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIG------PRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDA------SIAFTSSS 155 (247)
T ss_dssp HHHHHSCCSEEEECCCCCC------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSE------EEEEECCG
T ss_pred HHHhCCCCCEEEECCccCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------eEEEEcch
Confidence 9999999999999999864 45678899999999999999999999999999999887654 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccc-cCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSK-EGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+++|+|+++|+++++.|+++ .||+ +|+|+||.+++
T Consensus 156 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~-v~~v~PG~v~t 203 (247)
T 3i1j_A 156 VGRKG---RANWGAYGVSKFATEGLMQTLADELEGVTAVR-ANSINPGATRT 203 (247)
T ss_dssp GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEE-EEEEECCCCSS
T ss_pred hhcCC---CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecCcccC
Confidence 88876 688889999999999999999999987 8999 77999999975
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=253.05 Aligned_cols=186 Identities=19% Similarity=0.257 Sum_probs=165.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC--ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||++|||++++++|+++|++ |++++|+.+. .+.+.+.+...+.++.++++|++++++++++++++.++
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFD--IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999997 8888998765 55554555444678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCC-CcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT-GIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-~~~~~~~~iv~iss~~~~ 183 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++. | +||++||..+.
T Consensus 79 ~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 145 (258)
T 3a28_C 79 LGGFDVLVNNAGIA-------QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKG------KIINAASIAAI 145 (258)
T ss_dssp HTCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCC------EEEEECCGGGT
T ss_pred hCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCc------EEEEECcchhc
Confidence 99999999999986 3457788899999999999999999999999999987654 4 99999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 146 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~t 189 (258)
T 3a28_C 146 QG---FPILSAYSTTKFAVRGLTQAAAQELAPKGHT-VNAYAPGIVGT 189 (258)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCS
T ss_pred cC---CCCchhHHHHHHHHHHHHHHHHHHHHhhCeE-EEEEECCccCC
Confidence 66 6778899999999999999999999999999 77999999874
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=252.48 Aligned_cols=185 Identities=21% Similarity=0.271 Sum_probs=157.1
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
...|++++|++|||||++|||+++|++|+++|++ |++++|+.+.... ..... .+.++.+|+++++++++++++
T Consensus 20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---~~~~~--~~~~~~~Dv~~~~~v~~~~~~ 92 (260)
T 3gem_A 20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHR--VIISYRTEHASVT---ELRQA--GAVALYGDFSCETGIMAFIDL 92 (260)
T ss_dssp -------CCCEEESSTTSHHHHHHHHHHHHTTCC--EEEEESSCCHHHH---HHHHH--TCEEEECCTTSHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHH---HHHhc--CCeEEECCCCCHHHHHHHHHH
Confidence 3456789999999999999999999999999997 8899998765432 22211 378899999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||... ... .+.+.++|++.+++|+.++++++++++|+|.+++.| +||++||.
T Consensus 93 ~~~~~g~iD~lv~nAg~~~-------~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~ 158 (260)
T 3gem_A 93 LKTQTSSLRAVVHNASEWL-------AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVA------DIVHISDD 158 (260)
T ss_dssp HHHHCSCCSEEEECCCCCC-------CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCG
T ss_pred HHHhcCCCCEEEECCCccC-------CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------EEEEECCh
Confidence 9999999999999999763 222 566788999999999999999999999999988765 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|++||+|+++|+++++.|+++ +|+ +|+|+||.+++
T Consensus 159 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~-~Ir-vn~v~PG~v~t 204 (260)
T 3gem_A 159 VTRKG---SSKHIAYCATKAGLESLTLSFAARFAP-LVK-VNGIAPALLMF 204 (260)
T ss_dssp GGGTC---CSSCHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEEEEECTTCC
T ss_pred hhcCC---CCCcHhHHHHHHHHHHHHHHHHHHHCC-CCE-EEEEeeccccc
Confidence 88877 688889999999999999999999998 699 77999999874
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=257.18 Aligned_cols=192 Identities=13% Similarity=0.167 Sum_probs=165.5
Q ss_pred ccccccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+.+++++|++|||||+| |||+++|++|+++|++ |++++|++...+.+.+..+.. .++.+++||++|+++++++++
T Consensus 24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE--VALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHH
T ss_pred chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHH
Confidence 34578899999999997 9999999999999997 889999865544444444433 346899999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|+||||||+..+.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+. ++||++||
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--------g~IV~isS 169 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSDKNE---LKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNG--------GSILTLSY 169 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCCHHH---HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC--------EEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCCccc---ccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------CEEEEEEe
Confidence 99999999999999999863000 01567889999999999999999999999999999762 49999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 170 ~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~~~~gIr-vn~v~PG~v~T 217 (296)
T 3k31_A 170 YGAEKV---VPHYNVMGVCKAALEASVKYLAVDLGKQQIR-VNAISAGPVRT 217 (296)
T ss_dssp GGGTSC---CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECCCCC
T ss_pred hhhccC---CCCchhhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEEECCCcC
Confidence 988876 6888899999999999999999999999999 77999999975
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=254.50 Aligned_cols=187 Identities=16% Similarity=0.192 Sum_probs=165.9
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcC-CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|++|||||++|||++++++|+++|++ |++++|+.+. .+.+.+.+... +.++.++.+|++|+++++++++++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE--EEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999997 8888998765 55554444332 56789999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+.
T Consensus 80 ~~g~iD~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 146 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQ-------HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGL 146 (260)
T ss_dssp HHSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred hcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEECcHHhC
Confidence 999999999999976 34567888999999999999999999999999999876654 99999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 147 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 190 (260)
T 1x1t_A 147 VA---SANKSAYVAAKHGVVGFTKVTALETAGQGIT-ANAICPGWVRT 190 (260)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCBCC
T ss_pred cC---CCCCchHHHHHHHHHHHHHHHHHHhccCCEE-EEEEeecCccC
Confidence 66 6778899999999999999999999999999 77999999874
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=251.77 Aligned_cols=190 Identities=20% Similarity=0.209 Sum_probs=169.6
Q ss_pred ccccCeEEEEecCC-CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas-~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
..+++|++|||||+ +|||+++|++|+++|++ |++++|+.+..+.+.+.+... +.++.++++|++|+++++++++++
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGAD--VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 46789999999998 59999999999999997 999999987777665555433 468999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++.+ ++||++||..
T Consensus 96 ~~~~g~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~ 163 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLG-------GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHG-----GVIVNNASVL 163 (266)
T ss_dssp HHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCC-----EEEEEECCGG
T ss_pred HHHhCCCcEEEECCCcC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEeCCHH
Confidence 99999999999999986 35678889999999999999999999999999999876332 5999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 164 ~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 209 (266)
T 3o38_A 164 GWRA---QHSQSHYAAAKAGVMALTRCSAIEAVEFGVR-INAVSPSIARH 209 (266)
T ss_dssp GTCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCCCC
T ss_pred HcCC---CCCCchHHHHHHHHHHHHHHHHHHHHHcCcE-EEEEeCCcccc
Confidence 8776 6788899999999999999999999999999 77999999874
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=252.46 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=168.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAH--VVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999996 88899987666655555544567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+.
T Consensus 88 ~~g~iD~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 155 (260)
T 2zat_A 88 LHGGVDILVSNAAVNP------FFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGG------SVLIVSSVGAY 155 (260)
T ss_dssp HHSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGT
T ss_pred HcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEechhhc
Confidence 9999999999999753 24567888999999999999999999999999999877654 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 156 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 199 (260)
T 2zat_A 156 HP---FPNLGPYNVSKTALLGLTKNLAVELAPRNIR-VNCLAPGLIKT 199 (260)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEECcccC
Confidence 66 6778899999999999999999999999999 67999999874
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=252.79 Aligned_cols=181 Identities=22% Similarity=0.291 Sum_probs=160.5
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+..+++||++|||||++|||+++|++|+++|++ |++++|+.+... ..+..+++|++|++++++++++
T Consensus 7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~ 74 (269)
T 3vtz_A 7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAK--VVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVEK 74 (269)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHHH
Confidence 3445778999999999999999999999999997 888898865431 2567789999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||.
T Consensus 75 ~~~~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~ 141 (269)
T 3vtz_A 75 TTKKYGRIDILVNNAGIE-------QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG------SIINIASV 141 (269)
T ss_dssp HHHHHSCCCEEEECCCCC-------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred HHHHcCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECch
Confidence 999999999999999986 35678889999999999999999999999999999887665 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|++||+|+++|+++++.|+++ +|+ +|+|+||.|++
T Consensus 142 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~-vn~v~PG~v~T 187 (269)
T 3vtz_A 142 QSYAA---TKNAAAYVTSKHALLGLTRSVAIDYAP-KIR-CNAVCPGTIMT 187 (269)
T ss_dssp GGTSB---CTTCHHHHHHHHHHHHHHHHHHHHHTT-TEE-EEEEEECSBCC
T ss_pred hhccC---CCCChhHHHHHHHHHHHHHHHHHHhcC-CCE-EEEEEECCCcC
Confidence 88876 678889999999999999999999998 899 77999999975
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=258.91 Aligned_cols=189 Identities=16% Similarity=0.195 Sum_probs=169.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC--ceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+. ++.++.+|++++++++++++++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~--Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCK--VAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999997 99999998877776555443343 8999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC------CCCcccCceEEE
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------GTGIERDVAVVA 175 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~------~~~~~~~~~~iv 175 (231)
.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.++ +. ++||
T Consensus 82 ~~~~g~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~------g~iV 148 (319)
T 3ioy_A 82 EARFGPVSILCNNAGVN-------LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKG------GHVV 148 (319)
T ss_dssp HHHTCCEEEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCC------CEEE
T ss_pred HHhCCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCC------cEEE
Confidence 99999999999999986 35678889999999999999999999999999999764 33 4999
Q ss_pred EeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 176 NLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 176 ~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 149 ~isS~a~~~~---~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~-v~~v~PG~v~T 200 (319)
T 3ioy_A 149 NTASMAAFLA---AGSPGIYNTTKFAVRGLSESLHYSLLKYEIG-VSVLCPGLVKS 200 (319)
T ss_dssp EECCGGGTCC---CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCBC-
T ss_pred EecccccccC---CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCE-EEEEEcCeEcc
Confidence 9999998877 6888899999999999999999999999999 66999999874
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=255.59 Aligned_cols=193 Identities=23% Similarity=0.305 Sum_probs=166.8
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+ ++.++.+|++|+++++++++++.
T Consensus 24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGAR--VFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999997 8889998766665555444434 78899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.. ...++||++||..+
T Consensus 101 ~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--~~~g~iV~isS~~~ 171 (276)
T 2b4q_A 101 ELSARLDILVNNAGTSW-------GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA--ENPARVINIGSVAG 171 (276)
T ss_dssp HHCSCCSEEEECCCCCC-------CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS--SSCEEEEEECCGGG
T ss_pred HhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC--CCCCEEEEECCHHH
Confidence 99999999999999763 4567788899999999999999999999999999765430 01149999999988
Q ss_pred ccCCCCCCCcc-chhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWH-SYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++.. .|++||++++.|+++++.|++++||+ +|+|+||.+++
T Consensus 172 ~~~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~-vn~v~PG~v~T 217 (276)
T 2b4q_A 172 ISA---MGEQAYAYGPSKAALHQLSRMLAKELVGEHIN-VNVIAPGRFPS 217 (276)
T ss_dssp TCC---CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCCCS
T ss_pred cCC---CCCCccccHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeccCcC
Confidence 766 56677 89999999999999999999999999 77999999874
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=255.92 Aligned_cols=190 Identities=22% Similarity=0.262 Sum_probs=170.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++++|++|||||++|||+++|++|+++|++ |++.+|+.. ..+.+.+..+..+.++.++++|++++++++++++++
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLK--VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 45788999999999999999999999999997 888888543 344455666666789999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+.++++|+||||||.. ....+.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||..
T Consensus 102 ~~~~g~id~li~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~ 168 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVV-------RDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG------SVVNVASII 168 (271)
T ss_dssp HHHHSSCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHH
T ss_pred HHhcCCCCEEEECCCcC-------CCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC------EEEEEechh
Confidence 99999999999999987 35677889999999999999999999999999999887654 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|+|++.++++++.|++++||+ +|+|+||.|++
T Consensus 169 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 214 (271)
T 4iin_A 169 GERG---NMGQTNYSASKGGMIAMSKSFAYEGALRNIR-FNSVTPGFIET 214 (271)
T ss_dssp HHHC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECSBCC
T ss_pred hcCC---CCCchHhHHHHHHHHHHHHHHHHHHHHhCcE-EEEEEeCcccC
Confidence 8877 6788899999999999999999999999999 77999999874
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=252.88 Aligned_cols=192 Identities=20% Similarity=0.260 Sum_probs=164.9
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.. +.++.++.+|++++++++++++++.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAK--VVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999997 999999877666544433 5689999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|.+++. ....++||++||..+
T Consensus 79 ~~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~~~~iv~isS~~~ 150 (261)
T 3n74_A 79 SKFGKVDILVNNAGIGH------KPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA--KGQECVILNVASTGA 150 (261)
T ss_dssp HHHSCCCEEEECCCCCC------CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH--TTCCEEEEEECCTTT
T ss_pred HhcCCCCEEEECCccCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCCCeEEEEeCchhh
Confidence 99999999999999864 3566788899999999999999999999999999987531 011258999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 151 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 195 (261)
T 3n74_A 151 GRP---RPNLAWYNATKGWVVSVTKALAIELAPAKIR-VVALNPVAGET 195 (261)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEEC----
T ss_pred cCC---CCCccHHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCcccC
Confidence 766 6888899999999999999999999999999 77999999874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=251.62 Aligned_cols=185 Identities=19% Similarity=0.271 Sum_probs=165.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.+++|+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999996 888999877666655555555678999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCccccCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~~~ 186 (231)
+|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ . ++||++||..+..+
T Consensus 80 id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------g~iv~isS~~~~~~- 145 (256)
T 1geg_A 80 FDVIVNNAGVA-------PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG------GKIINACSQAGHVG- 145 (256)
T ss_dssp CCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC------EEEEEECCGGGTSC-
T ss_pred CCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------CEEEEECchhhcCC-
Confidence 99999999976 356778889999999999999999999999999998765 3 49999999988776
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 146 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 187 (256)
T 1geg_A 146 --NPELAVYSSSKFAVRGLTQTAARDLAPLGIT-VNGYCPGIVKT 187 (256)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBSS
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHHHHcCeE-EEEEEECCCcc
Confidence 6778899999999999999999999999999 77999999874
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=249.68 Aligned_cols=185 Identities=19% Similarity=0.204 Sum_probs=164.5
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++|++|||||++|||++++++|+++|++ |++++|+.+ +...+.+...+.++.++++|++|+++++++++++.+++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGAN--IVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999997 888899876 33334444446688999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+..+
T Consensus 78 g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~ 144 (255)
T 2q2v_A 78 GGVDILVNNAGIQ-------HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWG------RIINIASVHGLVG 144 (255)
T ss_dssp SSCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGTSC
T ss_pred CCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcCchhccC
Confidence 9999999999976 34567888999999999999999999999999999887654 9999999988766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 145 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 186 (255)
T 2q2v_A 145 ---STGKAAYVAAKHGVVGLTKVVGLETATSNVT-CNAICPGWVLT 186 (255)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEE-EEEEEESSBCC
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHhcccCcE-EEEEeeCCCcC
Confidence 6778899999999999999999999999999 77999999874
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=261.86 Aligned_cols=193 Identities=18% Similarity=0.219 Sum_probs=167.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC----------CCCccchhhhhhcCCCceeEEEecCCChHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN----------PNGATGLLDLKNRFPERLDVLQLDLTVEST 93 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~ 93 (231)
..++||++|||||++|||+++|++|+++|++ |++++|+ .+..+.+.+.+...+.++.++.+|++|+++
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 100 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGAR--VVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ 100 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 3678999999999999999999999999997 8888887 444555555555667789999999999999
Q ss_pred HHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceE
Q 026924 94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 173 (231)
++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+.+.......++
T Consensus 101 v~~~~~~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 173 (322)
T 3qlj_A 101 AAGLIQTAVETFGGLDVLVNNAGIVR-------DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGR 173 (322)
T ss_dssp HHHHHHHHHHHHSCCCEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcE
Confidence 99999999999999999999999873 56788999999999999999999999999999997543211111259
Q ss_pred EEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 174 VANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 174 iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
||++||..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+|| ++
T Consensus 174 IV~isS~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~-vn~v~PG-~~ 225 (322)
T 3qlj_A 174 IINTSSGAGLQG---SVGQGNYSAAKAGIATLTLVGAAEMGRYGVT-VNAIAPS-AR 225 (322)
T ss_dssp EEEECCHHHHHC---BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEEC-TT
T ss_pred EEEEcCHHHccC---CCCCccHHHHHHHHHHHHHHHHHHhcccCcE-EEEecCC-CC
Confidence 999999988877 6788899999999999999999999999999 7799999 65
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=256.47 Aligned_cols=194 Identities=19% Similarity=0.177 Sum_probs=164.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEee-cCCCCccchhhhhh-cCCCceeEEEecCCChH----------
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKN-RFPERLDVLQLDLTVES---------- 92 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~---------- 92 (231)
++++|++|||||++|||++++++|+++|++ |++++ |+.+..+.+.+.+. ..+.++.++++|+++++
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence 578999999999999999999999999997 88888 88766666554443 44678999999999999
Q ss_pred -------HHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhc--------------hHHHhhhhhhhhhHHHH
Q 026924 93 -------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPIL 151 (231)
Q Consensus 93 -------~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~ 151 (231)
+++++++++.+++|++|+||||||+.. ..++.+.+ .++|++.+++|+.+++.
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 156 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF 156 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCCCC-------------HHHHHHHHHHHHHHTHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999863 34556666 88999999999999999
Q ss_pred HHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++++++|.|.+++....+..++||++||..+..+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 157 l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 232 (291)
T 1e7w_A 157 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALELAPLQIR-VNGVGPGLSVL 232 (291)
T ss_dssp HHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBCC
T ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC---CCCCchhHHHHHHHHHHHHHHHHHHHhcCeE-EEEEeeCCccC
Confidence 9999999998765211111249999999988766 6888899999999999999999999999999 77999999975
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=250.30 Aligned_cols=192 Identities=19% Similarity=0.261 Sum_probs=167.1
Q ss_pred cccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC-ceeEEEecCCChHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 23 ~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~v~~~~~ 99 (231)
.+++++|++|||||+ +|||+++|++|+++|++ |++++|+....+.+.++.+..+. ++.++++|++|+++++++++
T Consensus 2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence 356889999999999 66999999999999997 88889986555555555555555 89999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.++++++|++|||||...+.. ...++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++||
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------g~iv~isS 148 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEE---LVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG--------GSIVTLTY 148 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC--------EEEEEEEC
T ss_pred HHHHHhCCeeEEEEccccccccc---cccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--------ceEEEEec
Confidence 99999999999999999763100 13567889999999999999999999999999999752 49999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 149 ~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 196 (266)
T 3oig_A 149 LGGELV---MPNYNVMGVAKASLDASVKYLAADLGKENIR-VNSISAGPIRT 196 (266)
T ss_dssp GGGTSC---CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCCCS
T ss_pred cccccc---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCcccc
Confidence 988877 6888899999999999999999999999999 77999999874
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=248.76 Aligned_cols=182 Identities=19% Similarity=0.210 Sum_probs=161.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.. + +.++.+|++|+++++++++++.++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999997 888899865544433222 2 788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||.. ..
T Consensus 75 ~g~id~lvn~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~-~~ 140 (245)
T 1uls_A 75 LGRLDGVVHYAGIT-------RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG------SIVLTASRV-YL 140 (245)
T ss_dssp HSSCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE------EEEEECCGG-GG
T ss_pred cCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEccch-hc
Confidence 99999999999986 35667888999999999999999999999999999877654 999999987 65
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 141 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 183 (245)
T 1uls_A 141 G---NLGQANYAASMAGVVGLTRTLALELGRWGIR-VNTLAPGFIET 183 (245)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHHhHhCeE-EEEEEeCcCcC
Confidence 5 5778899999999999999999999999999 77999999874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=253.89 Aligned_cols=188 Identities=23% Similarity=0.286 Sum_probs=168.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888999876666655555555678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh--hhcCCCCcccCceEEEEeccCcc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL--LKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|. |.+++.| +||++||..+
T Consensus 97 ~g~iD~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g------~iv~isS~~~ 163 (277)
T 2rhc_B 97 YGPVDVLVNNAGRP-------GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG------RIVNIASTGG 163 (277)
T ss_dssp TCSCSEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEE------EEEEECCGGG
T ss_pred hCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCe------EEEEECcccc
Confidence 99999999999976 3456788899999999999999999999999999 8776544 9999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 164 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 208 (277)
T 2rhc_B 164 KQG---VVHAAPYSASKHGVVGFTKALGLELARTGIT-VNAVCPGFVET 208 (277)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEE-EEEEEECSBCS
T ss_pred ccC---CCCCccHHHHHHHHHHHHHHHHHHHHHhCcE-EEEEecCcCcC
Confidence 766 6778899999999999999999999999999 77999999874
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=254.72 Aligned_cols=188 Identities=18% Similarity=0.215 Sum_probs=165.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++|++|||||++|||+++|++|+++|++ |++.++ +.+..+...+.....+.++.++.+|++|+++++++++++.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA--VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA 99 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999997 777774 44444444444555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+.
T Consensus 100 ~~g~id~li~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~ 166 (269)
T 3gk3_A 100 DFGKVDVLINNAGIT-------RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG------RIVNIGSVNGS 166 (269)
T ss_dssp HHSCCSEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHH
T ss_pred HcCCCCEEEECCCcC-------CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEeCChhhc
Confidence 999999999999987 35677888999999999999999999999999999887654 99999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 167 ~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 210 (269)
T 3gk3_A 167 RG---AFGQANYASAKAGIHGFTKTLALETAKRGIT-VNTVSPGYLAT 210 (269)
T ss_dssp HC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cC---CCCcchHHHHHHHHHHHHHHHHHHhhhcCCE-EEEEecCcccc
Confidence 77 6888899999999999999999999999999 77999999875
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=257.74 Aligned_cols=191 Identities=17% Similarity=0.223 Sum_probs=167.8
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc-------chhhhhhcCCCceeEEEecCCChHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-------GLLDLKNRFPERLDVLQLDLTVESTIE 95 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~-------~~~~~~~~~~~~v~~~~~Dls~~~~v~ 95 (231)
..+++||++|||||++|||+++|++|+++|++ |++++|+.+..+ ...+.++..+.++.++.+|++|+++++
T Consensus 40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~--Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~ 117 (346)
T 3kvo_A 40 TGRLAGCTVFITGASRGIGKAIALKAAKDGAN--IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS 117 (346)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCE--EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 34789999999999999999999999999997 899999877543 233444555778999999999999999
Q ss_pred HHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEE
Q 026924 96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA 175 (231)
Q Consensus 96 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv 175 (231)
++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++++.| +||
T Consensus 118 ~~~~~~~~~~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g------~IV 184 (346)
T 3kvo_A 118 AAVEKAIKKFGGIDILVNNASAIS-------LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVA------HIL 184 (346)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSC------EEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCC------EEE
Confidence 999999999999999999999873 5677889999999999999999999999999999988765 999
Q ss_pred EeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC-CCC
Q 026924 176 NLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH-CRY 231 (231)
Q Consensus 176 ~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~-~~~ 231 (231)
++||..+..+. +.+++..|++||+++++|+++++.|++ .||+ +|+|+||. +++
T Consensus 185 ~iSS~~~~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIr-vn~v~PG~~i~T 238 (346)
T 3kvo_A 185 NISPPLNLNPV-WFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIA-VNALWPKTAIHT 238 (346)
T ss_dssp EECCCCCCCGG-GTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCE-EEEEECSBCBCC
T ss_pred EECCHHHcCCC-CCCCchHHHHHHHHHHHHHHHHHHHhc-CCcE-EEEEeCCCcccc
Confidence 99998876541 146778999999999999999999999 9999 77999995 664
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=254.51 Aligned_cols=187 Identities=17% Similarity=0.220 Sum_probs=163.8
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
|.+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+...+.+... +..+.++.+|++++++++++++
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 81 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGAN--VLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE 81 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH
Confidence 446789999999999999999999999999997 899999987766654444322 3578899999999998877654
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
+++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||
T Consensus 82 ----~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS 144 (267)
T 3t4x_A 82 ----KYPKVDILINNLGIFE-------PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEG------RVIFIAS 144 (267)
T ss_dssp ----HCCCCSEEEECCCCCC-------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEE------EEEEECC
T ss_pred ----hcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEEcc
Confidence 5799999999999873 5677889999999999999999999999999999887754 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 145 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~t 192 (267)
T 3t4x_A 145 EAAIMP---SQEMAHYSATKTMQLSLSRSLAELTTGTNVT-VNTIMPGSTLT 192 (267)
T ss_dssp GGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEE-EEEEEECCBCC
T ss_pred hhhccC---CCcchHHHHHHHHHHHHHHHHHHHhCCCCeE-EEEEeCCeecC
Confidence 998876 6888899999999999999999999999999 77999999874
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=255.10 Aligned_cols=188 Identities=19% Similarity=0.244 Sum_probs=166.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC---ceeEEEecCCChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+. ++.++.+|++|++++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 4678999999999999999999999999997 88899987766665555444444 789999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcc--cchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETT--LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+.+++|++|+||||||... ..+ +.+.+.++|++.+++|+.+++.++++++|.|.+++ | +||++|
T Consensus 100 ~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g------~IV~is 165 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANL-------ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-G------EIVNVS 165 (297)
T ss_dssp HHHHHSCCCEEEECCCCCC-------CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C------EEEEEC
T ss_pred HHHhcCCCCEEEECCCcCc-------CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C------EEEEEc
Confidence 9999999999999999763 334 77889999999999999999999999999998765 5 999999
Q ss_pred cCccccCCCCC-CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRL-GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ . ++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 166 S~~~~~~---~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~-v~~v~PG~v~T 215 (297)
T 1xhl_A 166 SIVAGPQ---AHSGYPYYACAKAALDQYTRCTAIDLIQHGVR-VNSVSPGAVAT 215 (297)
T ss_dssp CGGGSSS---CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCS
T ss_pred CchhccC---CCCCcchHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeeCCCcC
Confidence 9887765 4 778899999999999999999999999999 77999999874
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=250.59 Aligned_cols=185 Identities=22% Similarity=0.281 Sum_probs=164.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ +.++.++.+|++++++++++++++.++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999997 888899875554443332 457889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||..+..
T Consensus 77 ~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~ 143 (254)
T 1hdc_A 77 FGSVDGLVNNAGIS-------TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG------SIVNISSAAGLM 143 (254)
T ss_dssp HSCCCEEEECCCCC-------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred cCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECchhhcc
Confidence 99999999999976 34567888999999999999999999999999999876554 999999998876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 144 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 186 (254)
T 1hdc_A 144 G---LALTSSYGASKWGVRGLSKLAAVELGTDRIR-VNSVHPGMTYT 186 (254)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecccCcC
Confidence 6 6778899999999999999999999999999 77999999874
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=251.58 Aligned_cols=190 Identities=17% Similarity=0.189 Sum_probs=156.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.
T Consensus 4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAA--VVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999997 8899999887777766666667789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||..... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +||++||..+
T Consensus 82 ~~~g~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~ 151 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAIFGGM----KLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG------AIVNQSSTAA 151 (253)
T ss_dssp HHHSCCCEEEECCCCCCGG----GGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEEECC---
T ss_pred HHcCCCCEEEECCCcCCCC----CCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------EEEEECCccc
Confidence 9999999999999974200 34556788999999999999999999999999999887654 9999999876
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. ++...|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 152 ~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 193 (253)
T 3qiv_A 152 W------LYSNYYGLAKVGINGLTQQLSRELGGRNIR-INAIAPGPIDT 193 (253)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTTTTEE-EEEEEC-----
T ss_pred c------CCCchhHHHHHHHHHHHHHHHHHHhhcCeE-EEEEEecCCcc
Confidence 5 334579999999999999999999999999 67999999864
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=259.54 Aligned_cols=188 Identities=18% Similarity=0.225 Sum_probs=162.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-----CccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-----GATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++++|++|||||++|||+++|++|+++|++ |++++|+.. ..+.+.+.....+.++.++++|++|+++++++++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~--V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~ 79 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHR--VYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAID 79 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence 467899999999999999999999999997 888777632 2233344444446789999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||
T Consensus 80 ~~~~~~g~iD~lVnnAG~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g------~iV~isS 146 (324)
T 3u9l_A 80 QIIGEDGRIDVLIHNAGHM-------VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHG------LLIWISS 146 (324)
T ss_dssp HHHHHHSCCSEEEECCCCC-------BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred HHHHHcCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEec
Confidence 9999999999999999987 36678899999999999999999999999999999887765 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
..+..+. .++...|++||+|+++++++++.|++++||+ +|+|+||.++
T Consensus 147 ~~~~~~~--~~~~~~Y~asKaa~~~~~~~la~el~~~gI~-v~~v~PG~v~ 194 (324)
T 3u9l_A 147 SSSAGGT--PPYLAPYFAAKAAMDAIAVQYARELSRWGIE-TSIIVPGAFT 194 (324)
T ss_dssp GGGTSCC--CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECCC-
T ss_pred chhccCC--CCcchhHHHHHHHHHHHHHHHHHHhhhhCcE-EEEEECCccc
Confidence 8877542 4667789999999999999999999999999 6799999986
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=254.26 Aligned_cols=190 Identities=14% Similarity=0.168 Sum_probs=163.0
Q ss_pred ccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++||++|||||+ +|||+++|++|+++|++ |++++|++...+.+.+..+.. .++.++++|++|+++++++++++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHH
Confidence 36889999999999 45999999999999997 888898854333344443332 36889999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||+..+.. ...++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++||..
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~ 172 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDE---LTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG--------GSILTLTYYG 172 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHH---HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC--------EEEEEEECGG
T ss_pred HHhcCCCCEEEECCccCCccc---ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CEEEEEeehh
Confidence 999999999999999762000 03567889999999999999999999999999999762 4999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 173 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 218 (293)
T 3grk_A 173 AEKV---MPNYNVMGVAKAALEASVKYLAVDLGPQNIR-VNAISAGPIKT 218 (293)
T ss_dssp GTSB---CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCCCC
T ss_pred hccC---CCchHHHHHHHHHHHHHHHHHHHHHhHhCCE-EEEEecCCCcc
Confidence 8877 6888899999999999999999999999999 77999999975
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=249.27 Aligned_cols=182 Identities=24% Similarity=0.333 Sum_probs=161.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
||++|||||++|||+++|++|+++|+...|++.+|+++..+.+.+.. +.++.++++|++|+++++++++++.+++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 78999999999999999999999975335888899876655544333 568999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|+|++++ | +||++||..+..+
T Consensus 79 id~lvnnAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g------~iv~isS~~~~~~-- 143 (254)
T 3kzv_A 79 IDSLVANAGVLE------PVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-G------NVVFVSSDACNMY-- 143 (254)
T ss_dssp CCEEEEECCCCC------CCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCSCCCCS--
T ss_pred ccEEEECCcccC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C------eEEEEcCchhccC--
Confidence 999999999864 346778899999999999999999999999999998765 4 9999999998876
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|++||+|+++|+++++.|+ .||+ +|+|+||.|++
T Consensus 144 -~~~~~~Y~asK~a~~~~~~~la~e~--~~i~-vn~v~PG~v~t 183 (254)
T 3kzv_A 144 -FSSWGAYGSSKAALNHFAMTLANEE--RQVK-AIAVAPGIVDT 183 (254)
T ss_dssp -SCCSHHHHHHHHHHHHHHHHHHHHC--TTSE-EEEEECSSCCC
T ss_pred -CCCcchHHHHHHHHHHHHHHHHhhc--cCcE-EEEEeCCcccc
Confidence 6888899999999999999999998 6899 77999999975
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=253.14 Aligned_cols=198 Identities=20% Similarity=0.192 Sum_probs=160.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhh-cCCCceeEEEecCCC----hHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKN-RFPERLDVLQLDLTV----ESTI 94 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~Dls~----~~~v 94 (231)
....++++|++|||||++|||+++|++|+++|++ |++++|+. +..+.+.+.+. ..+.++.++++|+++ ++++
T Consensus 16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v 93 (288)
T 2x9g_A 16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYR--VVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASC 93 (288)
T ss_dssp ------CCCEEEETTCSSHHHHHHHHHHHHHTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHH
T ss_pred CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHH
Confidence 3445688999999999999999999999999997 88899987 66665555443 446789999999999 9999
Q ss_pred HHHHHHHHHHcCCccEEEEccccCCCCCCCCCCccc-----ch-----hchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC
Q 026924 95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL-----NK-----VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG 164 (231)
Q Consensus 95 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~ 164 (231)
+++++++.+.++++|+||||||+.. ..++ .+ .+.++|++.+++|+.+++.+++.++|.|.+++
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 166 (288)
T 2x9g_A 94 EEIINSCFRAFGRCDVLVNNASAFY-------PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 166 (288)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC-------CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCC-------CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999863 2333 45 78899999999999999999999999998765
Q ss_pred CCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.......++||++||..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 167 ~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~t 229 (288)
T 2x9g_A 167 PNCTSSNLSIVNLCDAMVDQP---CMAFSLYNMGKHALVGLTQSAALELAPYGIR-VNGVAPGVSLL 229 (288)
T ss_dssp ----CCCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSCSC
T ss_pred CCCCCCCeEEEEEecccccCC---CCCCchHHHHHHHHHHHHHHHHHHhhccCeE-EEEEEeccccC
Confidence 100111259999999988766 6788899999999999999999999999999 77999999874
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=252.20 Aligned_cols=187 Identities=19% Similarity=0.219 Sum_probs=165.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC---ceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+...+. ++.++++|++|+++++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 468999999999999999999999999997 88899987766665555444344 7899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcc----cchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETT----LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
.+++|++|+||||||... ..+ +.+.+.++|++.+++|+.+++.++++++|.|.+++ | +||++
T Consensus 81 ~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~i 146 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAI-------PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G------EIVNV 146 (280)
T ss_dssp HHHHSCCCEEEECCCCCC-------CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEE
T ss_pred HHhcCCCCEEEECCCCCC-------CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C------cEEEe
Confidence 999999999999999763 233 67889999999999999999999999999997655 4 99999
Q ss_pred ccCccccCCCCC-CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRL-GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+ . ++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 147 sS~~~~~~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 197 (280)
T 1xkq_A 147 SSIVAGPQ---AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIR-VNSVSPGMVET 197 (280)
T ss_dssp CCGGGSSS---CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCBCS
T ss_pred cCccccCC---CCCcccHHHHHHHHHHHHHHHHHHHhccCCeE-EEEEeeCcCcC
Confidence 99887765 4 777899999999999999999999999999 77999999874
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=247.20 Aligned_cols=182 Identities=20% Similarity=0.213 Sum_probs=162.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+. +.+.+... + .++++|++|+++++++++++.++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999996 8889998766 44433332 4 78899999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..
T Consensus 75 ~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~~ 141 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAA-------PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG------AIVNVASVQGLF 141 (256)
T ss_dssp HSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCGGGTS
T ss_pred cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEccccccC
Confidence 999999999999763 4567788899999999999999999999999999887654 999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 142 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 184 (256)
T 2d1y_A 142 A---EQENAAYNASKGGLVNLTRSLALDLAPLRIR-VNAVAPGAIAT 184 (256)
T ss_dssp B---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred C---CCCChhHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEeeCCccC
Confidence 6 6788899999999999999999999999999 67999999874
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=252.44 Aligned_cols=189 Identities=18% Similarity=0.177 Sum_probs=161.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+ ..+.++.++.+|++++++++++++++.+
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGAR--VAVLDKSAERLRELEV---AHGGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHH---HcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 8889998765554333 3367899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||+..+... ......+.+.++|++.+++|+.+++.++++++|+|.+++ | +||+++|..+.
T Consensus 76 ~~g~iD~lvnnAg~~~~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~~ 146 (281)
T 3zv4_A 76 AFGKIDTLIPNAGIWDYSTA--LADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-G------SVVFTISNAGF 146 (281)
T ss_dssp HHSCCCEEECCCCCCCTTCC--GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGT
T ss_pred hcCCCCEEEECCCcCccccc--cccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C------eEEEEecchhc
Confidence 99999999999998641100 112223455678999999999999999999999997654 3 99999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++++ |+ +|+|+||.|++
T Consensus 147 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~-Ir-vn~v~PG~v~T 189 (281)
T 3zv4_A 147 YP---NGGGPLYTATKHAVVGLVRQMAFELAPH-VR-VNGVAPGGMNT 189 (281)
T ss_dssp SS---SSSCHHHHHHHHHHHHHHHHHHHHHTTT-SE-EEEEEECSSCC
T ss_pred cC---CCCCchhHHHHHHHHHHHHHHHHHhcCC-CE-EEEEECCcCcC
Confidence 76 6788899999999999999999999987 99 77999999975
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=251.18 Aligned_cols=190 Identities=17% Similarity=0.247 Sum_probs=152.2
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++++++|++|||||++|||+++|++|+++|++ |++++|+.+ ... +..+.++.++++|++|+++++++++.+
T Consensus 3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~---~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (257)
T 3tl3_A 3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQ--VVVLDIRGE---DVV---ADLGDRARFAAADVTDEAAVASALDLA 74 (257)
T ss_dssp -------CEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCH---HHH---HHTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCchH---HHH---HhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 346789999999999999999999999999997 888888432 222 223668999999999999999999998
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCccc----chhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC--cccCceEEE
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTL----NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG--IERDVAVVA 175 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~--~~~~~~~iv 175 (231)
.+ ++++|+||||||... .... .+.+.++|++.+++|+.+++.++++++|.|.++... .....++||
T Consensus 75 ~~-~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv 146 (257)
T 3tl3_A 75 ET-MGTLRIVVNCAGTGN-------AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVII 146 (257)
T ss_dssp HH-HSCEEEEEECGGGSH-------HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEE
T ss_pred HH-hCCCCEEEECCCCCC-------CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEE
Confidence 77 999999999999763 2222 247889999999999999999999999999872100 001125999
Q ss_pred EeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 176 NLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 176 ~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 147 ~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~-vn~v~PG~v~T 198 (257)
T 3tl3_A 147 NTASVAAFDG---QIGQAAYSASKGGVVGMTLPIARDLASHRIR-VMTIAPGLFDT 198 (257)
T ss_dssp EECCCC--CC---HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred EEcchhhcCC---CCCCccHHHHHHHHHHHHHHHHHHhcccCcE-EEEEEecCccC
Confidence 9999988776 6778899999999999999999999999999 77999999975
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=254.85 Aligned_cols=188 Identities=16% Similarity=0.209 Sum_probs=158.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC------------CccchhhhhhcCCCceeEEEecCCCh
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
.+++||++|||||++|||+++|++|+++|++ |++++|+.. ..+.........+.++.++++|++|+
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGAD--IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR 83 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCe--EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence 3688999999999999999999999999997 888888722 22223333445577899999999999
Q ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCc
Q 026924 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV 171 (231)
Q Consensus 92 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (231)
++++++++++.+++|++|+||||||... .. .+.+.++|++.+++|+.++++++++++|+|.+.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-------- 146 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICP-------LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-------- 146 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC-------CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT--------
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCc-------cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC--------
Confidence 9999999999999999999999999863 22 237889999999999999999999999999433
Q ss_pred eEEEEeccCccccCCC--------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 172 AVVANLSARVGSIGDN--------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 172 ~~iv~iss~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++||++||..+..+.. +.++...|+++|+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 147 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 213 (287)
T 3pxx_A 147 ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIR-ANVIHPTNVNT 213 (287)
T ss_dssp CEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEESSBSS
T ss_pred cEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCcccc
Confidence 3999999988765410 11566789999999999999999999999999 77999999974
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=250.44 Aligned_cols=178 Identities=22% Similarity=0.328 Sum_probs=159.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.. ..+++|+++.++++++++++.+
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~-----------~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGAR--VAVADRAVAGIAAD-----------LHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEECSSCCTTSCCS-----------EECCCCTTSHHHHHHHHHHHHH
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHhh-----------hccCcCCCCHHHHHHHHHHHHH
Confidence 4788999999999999999999999999996 99999987654332 2347899999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||..+.
T Consensus 91 ~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~~ 157 (266)
T 3uxy_A 91 GLGRLDIVVNNAGVIS-------RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG------AIVNVASCWGL 157 (266)
T ss_dssp HHSCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTT
T ss_pred hcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHHhC
Confidence 9999999999999873 5678889999999999999999999999999999887654 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 158 ~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~T 201 (266)
T 3uxy_A 158 RP---GPGHALYCLTKAALASLTQCMGMDHAPQGIR-INAVCPNEVNT 201 (266)
T ss_dssp BC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBCC
T ss_pred CC---CCCChHHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEeeCCCcc
Confidence 77 6888899999999999999999999999999 77999999975
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=248.85 Aligned_cols=186 Identities=22% Similarity=0.312 Sum_probs=164.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ ..++.++++|++|+++++++++++.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---hcCceEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 888899876555443333 23588899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+.
T Consensus 78 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 144 (260)
T 1nff_A 78 AFGGLHVLVNNAGILN-------IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG------SIINISSIEGL 144 (260)
T ss_dssp HHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEeehhhc
Confidence 9999999999999863 4567788999999999999999999999999999876554 99999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 145 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 188 (260)
T 1nff_A 145 AG---TVACHGYTATKFAVRGLTKSTALELGPSGIR-VNSIHPGLVKT 188 (260)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCS
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHhCccCcE-EEEEEeCCCCC
Confidence 66 6778899999999999999999999999999 77999999874
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=251.67 Aligned_cols=187 Identities=12% Similarity=0.115 Sum_probs=164.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+... +.++.++++|++|+++++++++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGAR--LLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999997 888999876665554443321 337899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++| +|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||..
T Consensus 81 ~~~~g-id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~ 146 (260)
T 2z1n_A 81 RDLGG-ADILVYSTGGP-------RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG------RMVYIGSVT 146 (260)
T ss_dssp HHTTC-CSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred HHhcC-CCEEEECCCCC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECchh
Confidence 99999 99999999976 35567888999999999999999999999999999876654 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+..+ .++...|+++|+++++++++++.|++++||+ +|+|+||.++
T Consensus 147 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~ 191 (260)
T 2z1n_A 147 LLRP---WQDLALSNIMRLPVIGVVRTLALELAPHGVT-VNAVLPSLIL 191 (260)
T ss_dssp GTSC---CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEE-EEEEEECHHH
T ss_pred hcCC---CCCCchhHHHHHHHHHHHHHHHHHHhhhCeE-EEEEEECCcc
Confidence 8766 6778899999999999999999999999999 7799999874
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=249.06 Aligned_cols=190 Identities=20% Similarity=0.255 Sum_probs=164.8
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
...+++++|++|||||++|||++++++|+++|++ |++++|+.+. .+.+.+.+...+.++.++.+|++++++++++++
T Consensus 22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 99 (283)
T 1g0o_A 22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE 99 (283)
T ss_dssp GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHH
Confidence 3445788999999999999999999999999997 8888888643 333444445556789999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|. +. ++||++||
T Consensus 100 ~~~~~~g~iD~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~------g~iv~isS 164 (283)
T 1g0o_A 100 EAVKIFGKLDIVCSNSGVV-------SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IG------GRLILMGS 164 (283)
T ss_dssp HHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TT------CEEEEECC
T ss_pred HHHHHcCCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cC------CeEEEEec
Confidence 9999999999999999986 345678889999999999999999999999999993 22 39999999
Q ss_pred CccccCCCCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+ +...|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 165 ~~~~~~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 213 (283)
T 1g0o_A 165 ITGQAK---AVPKHAVYSGSKGAIETFARCMAIDMADKKIT-VNVVAPGGIKT 213 (283)
T ss_dssp GGGTCS---SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBSS
T ss_pred hhhccC---CCCCCcchHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCcccc
Confidence 987765 34 47789999999999999999999999999 77999999874
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=246.96 Aligned_cols=182 Identities=16% Similarity=0.245 Sum_probs=161.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||+++|++|+++|++ |++++|+.+..+. .++.++++|++|+++++++++++.+
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~~ 92 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYR--VVATSRSIKPSAD---------PDIHTVAGDISKPETADRIVREGIE 92 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSCCCCSS---------TTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChhhccc---------CceEEEEccCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999997 8899998755332 3688999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+.
T Consensus 93 ~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~~ 159 (260)
T 3un1_A 93 RFGRIDSLVNNAGVF-------LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG------HIVSITTSLVD 159 (260)
T ss_dssp HHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCTTTT
T ss_pred HCCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEechhhc
Confidence 999999999999987 35678889999999999999999999999999999887765 99999998765
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
... +.++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 160 ~~~-~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~-vn~v~PG~v~t 205 (260)
T 3un1_A 160 QPM-VGMPSALASLTKGGLNAVTRSLAMEFSRSGVR-VNAVSPGVIKT 205 (260)
T ss_dssp SCB-TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEE-EEEEEECCBCC
T ss_pred cCC-CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeE-EEEEeecCCCC
Confidence 331 13455789999999999999999999999999 77999999874
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=251.39 Aligned_cols=190 Identities=19% Similarity=0.274 Sum_probs=163.1
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..+++ |++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+... .++.++++|++|+++++++++++.
T Consensus 17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 92 (272)
T 2nwq_A 17 GSHMS-STLFITGATSGFGEACARRFAEAGWS--LVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLP 92 (272)
T ss_dssp ----C-CEEEESSTTTSSHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCC
T ss_pred CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34566 99999999999999999999999997 888999876666554444332 578899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| ++||++||..+
T Consensus 93 ~~~g~iD~lvnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-----~~IV~isS~~~ 161 (272)
T 2nwq_A 93 EEFATLRGLINNAGLAL------GTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAG-----ASIVNLGSVAG 161 (272)
T ss_dssp GGGSSCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTT-----CEEEEECCGGG
T ss_pred HHhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----cEEEEeCCchh
Confidence 99999999999999763 23677889999999999999999999999999999876532 29999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 162 ~~~---~~~~~~Y~asKaa~~~l~~~la~el~~~gIr-vn~v~PG~v~T 206 (272)
T 2nwq_A 162 KWP---YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVR-VTNLEPGLCES 206 (272)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCE-EEEEEECSBC-
T ss_pred ccC---CCCCchHHHHHHHHHHHHHHHHHHhCccCeE-EEEEEcCCCcC
Confidence 766 6778899999999999999999999999999 77999999874
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=250.08 Aligned_cols=193 Identities=18% Similarity=0.141 Sum_probs=165.1
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
....++++|++|||||++|||+++|++|+++|++ .+++..|+.+..+...+.+...+.++.++.+|++|++++++++++
T Consensus 19 ~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 19 YFQSNAMSRSVLVTGASKGIGRAIARQLAADGFN-IGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp ------CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred hhccccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 3444678999999999999999999999999997 334455666666665555555677899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhh-cCCCCcccCceEEEEecc
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLK-VGGTGIERDVAVVANLSA 179 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~~~~~~~~~iv~iss 179 (231)
+.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|. +++. ++||++||
T Consensus 98 ~~~~~g~id~li~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------g~iv~isS 164 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIA-------RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQG------GRIITLSS 164 (267)
T ss_dssp HHHHHCCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC------EEEEEECC
T ss_pred HHHHhCCccEEEECCCCC-------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------cEEEEEcc
Confidence 999999999999999987 356778899999999999999999999999998886 3333 49999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|+++|+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 165 ~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 212 (267)
T 4iiu_A 165 VSGVMG---NRGQVNYSAAKAGIIGATKALAIELAKRKIT-VNCIAPGLIDT 212 (267)
T ss_dssp HHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred hHhccC---CCCCchhHHHHHHHHHHHHHHHHHHhhcCeE-EEEEEEeeecC
Confidence 988877 6888999999999999999999999999999 67999999874
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=248.52 Aligned_cols=181 Identities=20% Similarity=0.286 Sum_probs=160.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ +.++.++++|++|+++++++++++.+++|++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHK--VIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999997 888899876555444333 3578999999999999999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..+
T Consensus 76 D~lvnnAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~~~~--- 140 (248)
T 3asu_A 76 DILVNNAGLAL------GMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG------HIINIGSTAGSWP--- 140 (248)
T ss_dssp CEEEECCCCCC------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGGTSC---
T ss_pred CEEEECCCcCC------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEccchhccC---
Confidence 99999999752 24567888999999999999999999999999999876655 9999999988766
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|++||+++++|+++++.|++++||+ +|+|+||.|+
T Consensus 141 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~ 181 (248)
T 3asu_A 141 YAGGNVYGATKAFVRQFSLNLRTDLHGTAVR-VTDIEPGLVG 181 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCE-EEEEEECSBC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEeccccc
Confidence 6788899999999999999999999999999 7799999987
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=248.16 Aligned_cols=194 Identities=17% Similarity=0.190 Sum_probs=162.2
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++++|++|||||++|||+++|++|+++|++ |++++|+... .+.+.+.....+.++.++++|++|+++++++++++
T Consensus 2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 79 (264)
T 3i4f_A 2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYS--VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEA 79 (264)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CcccccCEEEEeCCCchhHHHHHHHHHHCCCE--EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 34567899999999999999999999999997 7777666543 33355555555678999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|+||||||.... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..
T Consensus 80 ~~~~g~id~lv~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~iss~~ 148 (264)
T 3i4f_A 80 MSHFGKIDFLINNAGPYVF-----ERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFG------RIINYGFQG 148 (264)
T ss_dssp HHHHSCCCEEECCCCCCCC-----SCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTT
T ss_pred HHHhCCCCEEEECCccccc-----CCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC------eEEEEeech
Confidence 9999999999999994210 35678889999999999999999999999999999887654 999999873
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.. ...+.++...|+++|+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 149 ~~-~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 196 (264)
T 3i4f_A 149 AD-SAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGIT-ANMVCPGDIIG 196 (264)
T ss_dssp GG-GCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCCCG
T ss_pred hc-ccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcE-EEEEccCCccC
Confidence 32 11125677899999999999999999999999999 67999999863
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=246.05 Aligned_cols=186 Identities=18% Similarity=0.229 Sum_probs=163.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ ..++.++++|++|+++++++++++.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGAT--VAIADLDVMAAQAVVAGL---ENGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTC---TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999996 888899875544433322 23688899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCcc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~ 182 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .+ +||++||..+
T Consensus 83 ~~g~iD~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~ 149 (263)
T 3ak4_A 83 ALGGFDLLCANAGVS-------TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG------VIVNTASLAA 149 (263)
T ss_dssp HHTCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC------EEEEECCGGG
T ss_pred HcCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe------EEEEeccccc
Confidence 999999999999976 345678889999999999999999999999999998765 44 9999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 150 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 194 (263)
T 3ak4_A 150 KVG---APLLAHYSASKFAVFGWTQALAREMAPKNIR-VNCVCPGFVKT 194 (263)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBTT
T ss_pred ccC---CCCchhHHHHHHHHHHHHHHHHHHHhHcCeE-EEEEecccccC
Confidence 766 6778899999999999999999999999999 77999999874
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=255.90 Aligned_cols=194 Identities=19% Similarity=0.177 Sum_probs=164.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEee-cCCCCccchhhhhh-cCCCceeEEEecCCChH----------
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKN-RFPERLDVLQLDLTVES---------- 92 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~---------- 92 (231)
++++|++|||||++|||+++|++|+++|++ |++++ |+.+..+.+.+.+. ..+.++.++++|+++++
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~--Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 120 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence 378999999999999999999999999997 88888 88766666554443 44678999999999999
Q ss_pred -------HHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhc--------------hHHHhhhhhhhhhHHHH
Q 026924 93 -------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPIL 151 (231)
Q Consensus 93 -------~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~ 151 (231)
+++++++++.+++|++|+||||||+.. ..++.+.+ .++|++.+++|+.+++.
T Consensus 121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~ 193 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF 193 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCSCC-------------CHHHHHHHHHHHHHTHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999863 34455666 88999999999999999
Q ss_pred HHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
++++++|.|.+++.......++||++||..+..+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 194 l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~---~~~~~~Y~asKaal~~l~~~la~el~~~gIr-vn~v~PG~v~T 269 (328)
T 2qhx_A 194 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALELAPLQIR-VNGVGPGLSVL 269 (328)
T ss_dssp HHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBSC
T ss_pred HHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC---CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEecCcccC
Confidence 9999999998765100111249999999988766 6788899999999999999999999999999 77999999975
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=250.37 Aligned_cols=193 Identities=19% Similarity=0.215 Sum_probs=158.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcC-CCceeEEEecCCCh----HHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRF-PERLDVLQLDLTVE----STIEASA 98 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~----~~v~~~~ 98 (231)
++++|++|||||++|||++++++|+++|++ |++++| +.+..+.+.+.+... +.++.++++|++++ +++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence 467999999999999999999999999996 888899 766555554444333 56899999999999 9999999
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhch-----------HHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCc
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK-----------SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI 167 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~ 167 (231)
+++.+.+|++|+||||||... ..++.+.+. ++|++.+++|+.+++.++++++|.|. ++...
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ 157 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNASAYY-------PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAW 157 (276)
T ss_dssp HHHHHHHSCCCEEEECCCCCC-------CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------
T ss_pred HHHHHhcCCCCEEEECCCCCC-------CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCC
Confidence 999999999999999999863 345566666 89999999999999999999999997 43311
Q ss_pred ccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 168 ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 168 ~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
....++||++||..+..+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 158 ~~~~g~iv~isS~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~-v~~v~PG~v~t 217 (276)
T 1mxh_A 158 RSRNLSVVNLCDAMTDLP---LPGFCVYTMAKHALGGLTRAAALELAPRHIR-VNAVAPGLSLL 217 (276)
T ss_dssp -CCCEEEEEECCGGGGSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBSC
T ss_pred CCCCcEEEEECchhhcCC---CCCCeehHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCcccC
Confidence 112249999999988766 6788899999999999999999999999999 77999999874
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=249.70 Aligned_cols=187 Identities=19% Similarity=0.228 Sum_probs=157.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh---hcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK---NRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~---~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ ...+.++.++++|++|+++++++++++
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 467999999999999999999999999997 888999876666554443 223457899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchh----chHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKV----EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
.+++|++|+||||||... ..++.+. +.++|++.+++|+.+++.++++++|.|++++ | +||++
T Consensus 81 ~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~i 146 (278)
T 1spx_A 81 LGKFGKLDILVNNAGAAI-------PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G------EIVNI 146 (278)
T ss_dssp HHHHSCCCEEEECCC--------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEE
T ss_pred HHHcCCCCEEEECCCCCC-------CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------eEEEE
Confidence 999999999999999763 3455666 8899999999999999999999999997654 4 99999
Q ss_pred ccCcc-ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVG-SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~-~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+ ..+ .++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 147 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 197 (278)
T 1spx_A 147 SSIASGLHA---TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR-VNSISPGLVAT 197 (278)
T ss_dssp CCTTSSSSC---CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCC
T ss_pred ecccccccC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCcE-EEEEecCcccC
Confidence 99887 555 6778899999999999999999999999999 77999999874
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=246.67 Aligned_cols=192 Identities=17% Similarity=0.174 Sum_probs=162.3
Q ss_pred ccccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
....+++|++|||||+ +|||+++|++|+++|++ |++++|+....+.+.+..+.. .++.++++|++|+++++++++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAE--LAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC--EEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHHHH
Confidence 3446789999999998 99999999999999997 888999854444444444443 358899999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccch-hchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
++.++++++|+||||||+..+.. ...++.+ .+.++|++.+++|+.+++.++++++|.|++. ++||++|
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------g~iv~is 153 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREA---IAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD--------ASLLTLS 153 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGG---GSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE--------EEEEEEE
T ss_pred HHHHHcCCCCEEEECCccCcccc---ccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC--------ceEEEEe
Confidence 99999999999999999863100 0134444 8899999999999999999999999999752 4999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 154 S~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 202 (271)
T 3ek2_A 154 YLGAERA---IPNYNTMGLAKAALEASVRYLAVSLGAKGVR-VNAISAGPIKT 202 (271)
T ss_dssp CGGGTSB---CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCC--
T ss_pred ccccccC---CCCccchhHHHHHHHHHHHHHHHHHHhcCcE-EEEEecCcccc
Confidence 9988877 6888899999999999999999999999999 67999999974
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=247.04 Aligned_cols=184 Identities=22% Similarity=0.289 Sum_probs=163.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++.+|+.+..+.+.+.+ +.++.++++|++|+++++++++++.++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999997 888899876555443333 567899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ + +||++||..+..
T Consensus 78 ~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~ 143 (253)
T 1hxh_A 78 LGTLNVLVNNAGIL-------LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-G------SIINMASVSSWL 143 (253)
T ss_dssp HCSCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-E------EEEEECCGGGTS
T ss_pred cCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-C------EEEEEcchhhcC
Confidence 99999999999976 345677889999999999999999999999999998765 4 999999998876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhcccc--CCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKE--GSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~--gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+++++|+++++.|++++ ||+ +|+|+||.+++
T Consensus 144 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~-v~~v~Pg~v~t 188 (253)
T 1hxh_A 144 P---IEQYAGYSASKAAVSALTRAAALSCRKQGYAIR-VNSIHPDGIYT 188 (253)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEE-EEEEEESEECC
T ss_pred C---CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeE-EEEEEeCCccC
Confidence 6 6788899999999999999999999999 999 77999999864
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=249.40 Aligned_cols=185 Identities=26% Similarity=0.429 Sum_probs=164.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+ ..+.++.++.+|++|+++++++++++.++
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDT--VIGTARRTEALDDLVA---AYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHH---HCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999999999996 8899998766555433 33568999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||..+..
T Consensus 77 ~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~ 143 (281)
T 3m1a_A 77 YGRVDVLVNNAGRT-------QVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG------SVVNISSFGGQL 143 (281)
T ss_dssp HSCCSEEEECCCCE-------EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTC
T ss_pred CCCCCEEEECCCcC-------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEEcCccccC
Confidence 99999999999986 35667788999999999999999999999999999887654 999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+++++++++++.|++++||+ +|+|+||.+++
T Consensus 144 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 186 (281)
T 3m1a_A 144 S---FAGFSAYSATKAALEQLSEGLADEVAPFGIK-VLIVEPGAFRT 186 (281)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhhccCcE-EEEEecCcccc
Confidence 6 6788899999999999999999999999999 67999999864
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=244.10 Aligned_cols=178 Identities=22% Similarity=0.331 Sum_probs=152.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|++|||||++|||++++++|+++|++ |++.+|+.+..+.+. .+++|++|+++++++++++.+
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~-----------~~~~D~~~~~~~~~~~~~~~~ 77 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPKGLF-----------GVEVDVTDSDAVDRAFTAVEE 77 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCTTSE-----------EEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHhc-----------CeeccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999997 888899876544321 388999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+.
T Consensus 78 ~~g~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~ 144 (247)
T 1uzm_A 78 HQGPVEVLVSNAGLS-------ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG------RMIFIGSVSGL 144 (247)
T ss_dssp HHSSCSEEEEECSCC-------C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCCC-
T ss_pred HcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEECCHhhc
Confidence 999999999999986 34567788999999999999999999999999999877654 99999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++.|+++++.|++++||+ +|+|+||.+++
T Consensus 145 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 188 (247)
T 1uzm_A 145 WG---IGNQANYAASKAGVIGMARSIARELSKANVT-ANVVAPGYIDT 188 (247)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cC---CCCChhHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEEeCCCcc
Confidence 76 6778899999999999999999999999999 77999999874
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=247.59 Aligned_cols=192 Identities=19% Similarity=0.262 Sum_probs=166.9
Q ss_pred ccccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCc-cc-hhhhhhcCCCceeEEEecCCChHHHHHH
Q 026924 22 ASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TG-LLDLKNRFPERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~ 97 (231)
..+++++|++|||||+ +|||+++|++|+++|++ |++++|+.... +. +.++.+..+.++.++++|++|+++++++
T Consensus 14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~ 91 (267)
T 3gdg_A 14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAA--VAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKL 91 (267)
T ss_dssp HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCE--EEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHH
T ss_pred cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCe--EEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHH
Confidence 3457899999999999 99999999999999997 88888876654 33 3344444477899999999999999999
Q ss_pred HHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
++++.++++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++
T Consensus 92 ~~~~~~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~i 158 (267)
T 3gdg_A 92 VKDVVADFGQIDAFIANAGATA-------DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTG------SLVIT 158 (267)
T ss_dssp HHHHHHHTSCCSEEEECCCCCC-------CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEE
T ss_pred HHHHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCc------eEEEE
Confidence 9999999999999999999873 5567888999999999999999999999999999887765 99999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+.. .+++..|++||+|+++|+++++.|+++. |+ +|+|+||.+++
T Consensus 159 sS~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~-v~~v~PG~v~t 209 (267)
T 3gdg_A 159 ASMSGHIANF-PQEQTSYNVAKAGCIHMARSLANEWRDF-AR-VNSISPGYIDT 209 (267)
T ss_dssp CCGGGTSCCS-SSCCHHHHHHHHHHHHHHHHHHHHTTTT-CE-EEEEEECCEEC
T ss_pred ccccccccCC-CCCCCcchHHHHHHHHHHHHHHHHhccC-cE-EEEEECCcccc
Confidence 9988876521 2467899999999999999999999988 98 77999999874
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-36 Score=242.14 Aligned_cols=179 Identities=20% Similarity=0.270 Sum_probs=158.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++++|++|||||++|||++++++|+++|++ |++++|+.+. +.. .+.++.+|++|+++++++++++.+
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~ 70 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAK--VTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLA 70 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999997 8888998652 111 278899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+.
T Consensus 71 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~ 137 (250)
T 2fwm_X 71 ETERLDALVNAAGILR-------MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG------AIVTVASDAAH 137 (250)
T ss_dssp HCSCCCEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGGT
T ss_pred HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC------EEEEECchhhC
Confidence 9999999999999763 4567788999999999999999999999999999876655 99999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++.|+++++.|++++||+ +|+|+||.+++
T Consensus 138 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 181 (250)
T 2fwm_X 138 TP---RIGMSAYGASKAALKSLALSVGLELAGSGVR-CNVVSPGSTDT 181 (250)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCC--
T ss_pred CC---CCCCchHHHHHHHHHHHHHHHHHHhCccCCE-EEEEECCcccC
Confidence 66 6788899999999999999999999999999 77999999864
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=246.57 Aligned_cols=180 Identities=25% Similarity=0.331 Sum_probs=155.6
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
...++++|++|||||++|||++++++|+++|++ |++.+|+.+..+ .+.++++|++|+++++++++++
T Consensus 15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~ 81 (253)
T 2nm0_A 15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDK--VAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEI 81 (253)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHH
Confidence 345778999999999999999999999999997 888899765432 2678999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..
T Consensus 82 ~~~~g~iD~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~ 148 (253)
T 2nm0_A 82 EETHGPVEVLIANAGVT-------KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG------RVVLISSVV 148 (253)
T ss_dssp HHHTCSCSEEEEECSCC-------TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEEECCCC
T ss_pred HHHcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEECchh
Confidence 99999999999999986 35567788899999999999999999999999999876554 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|++++.|+++++.|++++||+ +|+|+||.+++
T Consensus 149 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-vn~v~PG~v~T 194 (253)
T 2nm0_A 149 GLLG---SAGQANYAASKAGLVGFARSLARELGSRNIT-FNVVAPGFVDT 194 (253)
T ss_dssp CCCC---HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEE-EEEEEECSBCC
T ss_pred hCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeCcCcC
Confidence 7765 5677899999999999999999999999999 77999999874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-36 Score=246.10 Aligned_cols=189 Identities=16% Similarity=0.261 Sum_probs=160.4
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++|++|||||+ +|||++++++|+++|++ |++++|+.+ .+. +.++....+ ++.++++|++++++++++++++
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~ 93 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQ--LAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFL 93 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE--EEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE--EEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHH
Confidence 3789999999999 99999999999999997 888899874 222 333323223 4788999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||...+.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..
T Consensus 94 ~~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------g~iv~isS~~ 163 (285)
T 2p91_A 94 EENWGSLDIIVHSIAYAPKEE---FKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRN-------GAIVTLSYYG 163 (285)
T ss_dssp HHHTSCCCEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSC-------CEEEEEECGG
T ss_pred HHHcCCCCEEEECCCCCCccc---CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CEEEEEccch
Confidence 999999999999999763000 024677889999999999999999999999999997542 3999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|++||+++++++++++.|++++||+ +|+|+||.|++
T Consensus 164 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 209 (285)
T 2p91_A 164 AEKV---VPHYNVMGIAKAALESTVRYLAYDIAKHGHR-INAISAGPVKT 209 (285)
T ss_dssp GTSB---CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCCCC
T ss_pred hccC---CCCccHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEEeCcccC
Confidence 7766 6778899999999999999999999999999 77999999874
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=245.51 Aligned_cols=194 Identities=19% Similarity=0.123 Sum_probs=162.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++++|++|+++++++++++.++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGAT--VYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999999996 888899876666655554444668999999999999999999999886
Q ss_pred -cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 105 -YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 -~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+|++|+||||||............++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.| +||++||..+.
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~ 153 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG------LIVVISSPGSL 153 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC------EEEEECCGGGT
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc------EEEEEcChhhc
Confidence 89999999999532100000013456678889999999999999999999999999877655 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ ++...|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 154 ~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 196 (260)
T 2qq5_A 154 QY----MFNVPYGVGKAACDKLAADCAHELRRHGVS-CVSLWPGIVQT 196 (260)
T ss_dssp SC----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEECCCSCT
T ss_pred CC----CCCCchHHHHHHHHHHHHHHHHHhccCCeE-EEEEecCcccc
Confidence 54 345789999999999999999999999999 77999999975
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=247.16 Aligned_cols=184 Identities=21% Similarity=0.311 Sum_probs=162.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+++..+.+.+.. .++.++++|++|+++++++++++.++
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 888899876554443332 24788999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|+|+++. ++||++||..+..
T Consensus 80 ~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------g~iv~isS~~~~~ 146 (270)
T 1yde_A 80 FGRLDCVVNNAGHHP------PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-------GNVINISSLVGAI 146 (270)
T ss_dssp HSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEECCHHHHH
T ss_pred cCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-------CEEEEEcCccccC
Confidence 999999999999763 345678889999999999999999999999999997643 3999999988777
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 147 ~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-vn~v~Pg~v~t 189 (270)
T 1yde_A 147 G---QAQAVPYVATKGAVTAMTKALALDESPYGVR-VNCISPGNIWT 189 (270)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCC
T ss_pred C---CCCCcccHHHHHHHHHHHHHHHHHhhhhCcE-EEEEEeCcccc
Confidence 6 6778899999999999999999999999999 77999999874
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=244.06 Aligned_cols=188 Identities=21% Similarity=0.297 Sum_probs=160.6
Q ss_pred cccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 23 ~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+++++|++|||||+ +|||++++++|+++|++ |++++|+.+..+.+.++.+..+ .+.++++|++|++++++++++
T Consensus 3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~ 79 (261)
T 2wyu_A 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAG 79 (261)
T ss_dssp EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCE--EEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHH
Confidence 346789999999999 99999999999999997 8888998642222333323223 478899999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCC---CcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQP---ETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
+.+++|++|+||||||... . ..++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++
T Consensus 80 ~~~~~g~iD~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~i 145 (261)
T 2wyu_A 80 VKEAFGGLDYLVHAIAFAP------REAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTL 145 (261)
T ss_dssp HHHHHSSEEEEEECCCCCC------HHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEE
T ss_pred HHHHcCCCCEEEECCCCCC------cccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC--------CEEEEE
Confidence 9999999999999999752 1 1467788999999999999999999999999999642 399999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+ .+++..|++||+++++++++++.|++++||+ +|+|+||.|++
T Consensus 146 sS~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 195 (261)
T 2wyu_A 146 TYYASEKV---VPKYNVMAIAKAALEASVRYLAYELGPKGVR-VNAISAGPVRT 195 (261)
T ss_dssp ECGGGTSB---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCCCC
T ss_pred ecccccCC---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcE-EEEEeeCCCcC
Confidence 99887766 6778899999999999999999999999999 77999999874
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=242.04 Aligned_cols=176 Identities=23% Similarity=0.279 Sum_probs=159.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+. +.++.++++|++|+++++++++++.++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999997 8888987654 356888999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..
T Consensus 72 ~g~iD~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~ 138 (264)
T 2dtx_A 72 YGSISVLVNNAGIE-------SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDP------SIVNISSVQASI 138 (264)
T ss_dssp HSCCCEEEECCCCC-------CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC------EEEEECCGGGTS
T ss_pred cCCCCEEEECCCCC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEECCchhcc
Confidence 99999999999976 34567788999999999999999999999999999887655 999999998876
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||++++.|+++++.|+++. |+ +|+|+||.+++
T Consensus 139 ~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~-vn~v~PG~v~t 180 (264)
T 2dtx_A 139 I---TKNASAYVTSKHAVIGLTKSIALDYAPL-LR-CNAVCPATIDT 180 (264)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHTTT-SE-EEEEEECSBCS
T ss_pred C---CCCchhHHHHHHHHHHHHHHHHHHhcCC-cE-EEEEEeCCCcC
Confidence 6 6778899999999999999999999998 99 77999999874
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=243.63 Aligned_cols=188 Identities=20% Similarity=0.244 Sum_probs=160.6
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++|++|||||+ +|||++++++|+++|++ |++++|+.+ .+. +.++.+..+ ++.++++|++++++++++++++
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSV 78 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE--EEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHH
Confidence 3679999999999 99999999999999997 888999876 333 333333223 4789999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|++|+||||||...+.. ...++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++||..
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~ 147 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEA---LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG--------ASVLTLSYLG 147 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGG
T ss_pred HHHcCCCCEEEECCccCcccc---CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEEecch
Confidence 999999999999999763000 02467788999999999999999999999999999742 3999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 148 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 193 (275)
T 2pd4_A 148 STKY---MAHYNVMGLAKAALESAVRYLAVDLGKHHIR-VNALSAGPIRT 193 (275)
T ss_dssp GTSB---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCCCC
T ss_pred hcCC---CCCchhhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcccc
Confidence 7766 6778899999999999999999999999999 77999999975
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-36 Score=245.22 Aligned_cols=191 Identities=21% Similarity=0.257 Sum_probs=164.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++|++|||||++|||+++|++|+++|++ |++. .|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.+++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWR--VGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999997 6554 677666666666666667899999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+||||||... ...++.+.+.++|++.+++|+.+++.+++.++|.|.+...+ ..++||++||..+..+
T Consensus 103 g~id~li~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~ 173 (272)
T 4e3z_A 103 GRLDGLVNNAGIVD------YPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG---QGGAIVNVSSMAAILG 173 (272)
T ss_dssp SCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCTHHHHC
T ss_pred CCCCEEEECCCCCC------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC---CCCEEEEEcchHhccC
Confidence 99999999999864 34678889999999999999999999999999999773110 1159999999988776
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 174 ~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 216 (272)
T 4e3z_A 174 S--ATQYVDYAASKAAIDTFTIGLAREVAAEGIR-VNAVRPGIIET 216 (272)
T ss_dssp C--TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBC-
T ss_pred C--CCCcchhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEecCCCcC
Confidence 2 2366789999999999999999999999999 67999999874
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=243.25 Aligned_cols=188 Identities=19% Similarity=0.182 Sum_probs=161.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHh---cCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~---~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++++|++|||||++|||++++++|++ .|++ |++++|+.+..+.+.+.+... +.++.++++|++++++++++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSV--MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE--EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe--EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHH
Confidence 56899999999999999999999999 8996 889999877666655444332 4579999999999999999999
Q ss_pred HHHH--HcCCcc--EEEEccccCCCCCCCCCCcccch-hchHHHhhhhhhhhhHHHHHHHHhhhhhhcC--CCCcccCce
Q 026924 100 SIKE--KYGSLN--LLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVG--GTGIERDVA 172 (231)
Q Consensus 100 ~~~~--~~g~id--~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 172 (231)
++.+ .+|++| +||||||...+ ...++.+ .+.++|++.+++|+.+++.++++++|.|+++ +. +
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~------g 149 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGD-----VSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLS------K 149 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCC-----CSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCE------E
T ss_pred HHHhccccccCCccEEEECCcccCC-----CCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC------c
Confidence 9988 678898 99999997530 1235666 6889999999999999999999999999876 33 4
Q ss_pred EEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 173 VVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 173 ~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||++||..+..+ .++...|++||+|+++|+++++.|+++ |+ +|+|+||.+++
T Consensus 150 ~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~--i~-vn~v~PG~v~T 202 (259)
T 1oaa_A 150 TVVNISSLCALQP---YKGWGLYCAGKAARDMLYQVLAAEEPS--VR-VLSYAPGPLDN 202 (259)
T ss_dssp EEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHCTT--EE-EEEEECCSBSS
T ss_pred eEEEEcCchhcCC---CCCccHHHHHHHHHHHHHHHHHhhCCC--ce-EEEecCCCcCc
Confidence 9999999988766 678889999999999999999999974 98 77999999975
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=246.59 Aligned_cols=182 Identities=17% Similarity=0.182 Sum_probs=157.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+++..+.+.+.+ ..++.++++|++|+++++++++++.++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999996 888899875554433332 357889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.| ++ .| +||++||..+.
T Consensus 78 ~g~iD~lvnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g------~iv~isS~~~~- 141 (263)
T 2a4k_A 78 FGRLHGVAHFAGVA-------HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GG------SLVLTGSVAGL- 141 (263)
T ss_dssp HSCCCEEEEGGGGT-------TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TC------EEEEECCCTTC-
T ss_pred cCCCcEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CC------EEEEEecchhc-
Confidence 99999999999986 35567788999999999999999999999999999 44 33 99999999877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 142 ~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 184 (263)
T 2a4k_A 142 G---AFGLAHYAAGKLGVVGLARTLALELARKGVR-VNVLLPGLIQT 184 (263)
T ss_dssp C---HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCE-EEEEEECSBCC
T ss_pred C---CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcE-EEEEEeCcCcC
Confidence 5 5777899999999999999999999999999 77999999874
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=242.67 Aligned_cols=185 Identities=23% Similarity=0.289 Sum_probs=163.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEE-eecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|++|||||++|||++++++|+++|++ |++ ..|+.+..+...+.+...+.++.++.+|+++.++++++++++.++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGAL--VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 57999999999999999999999999997 655 466666666666666666778999999999999999999999887
Q ss_pred cC------CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 105 YG------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 105 ~g------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
++ ++|+||||||.. +..++.+.+.++|++.+++|+.+++.++++++|.|++. ++||++|
T Consensus 83 ~~~~~~~~~id~lv~nAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~~iv~is 147 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIG-------PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--------SRIINIS 147 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEEC
T ss_pred hcccccCCcccEEEECCCCC-------CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC--------CEEEEeC
Confidence 64 599999999986 46678889999999999999999999999999999543 3999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 148 S~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 196 (255)
T 3icc_A 148 SAATRIS---LPDFIAYSMTKGAINTMTFTLAKQLGARGIT-VNAILPGFVKT 196 (255)
T ss_dssp CGGGTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCC
T ss_pred ChhhccC---CCCcchhHHhHHHHHHHHHHHHHHHHhcCeE-EEEEEEeeecc
Confidence 9988877 7888999999999999999999999999999 77999999975
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=242.54 Aligned_cols=189 Identities=14% Similarity=0.152 Sum_probs=161.5
Q ss_pred cccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++|||||+ +|||+++|++|+++|++ |++++|+. ..+.+.++.+. ..++.++.+|++++++++++++++.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~-~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAE--LAFTYVGQ-FKDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVELG 98 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCE--EEEEECTT-CHHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCE--EEEeeCch-HHHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHHH
Confidence 5789999999998 77999999999999997 89999987 22223333333 3468999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccch-hchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++++++|+||||||+..+.. ...++.+ .+.++|++.+++|+.+++.++++++|.|.++. ++||++||..
T Consensus 99 ~~~g~id~li~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------g~iv~isS~~ 168 (280)
T 3nrc_A 99 KVWDGLDAIVHSIAFAPRDQ---LEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRN-------ASMVALTYIG 168 (280)
T ss_dssp HHCSSCCEEEECCCCCCGGG---SSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-------CEEEEEECGG
T ss_pred HHcCCCCEEEECCccCCCcc---cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-------CeEEEEeccc
Confidence 99999999999999863100 0144555 89999999999999999999999999998663 3999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 169 ~~~~---~~~~~~Y~asKaal~~~~~~la~e~~~~gi~-v~~v~PG~v~T 214 (280)
T 3nrc_A 169 AEKA---MPSYNTMGVAKASLEATVRYTALALGEDGIK-VNAVSAGPIKT 214 (280)
T ss_dssp GTSC---CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCCCC
T ss_pred cccC---CCCchhhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEeeccccc
Confidence 8876 6888899999999999999999999999999 77999999975
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=242.73 Aligned_cols=187 Identities=17% Similarity=0.228 Sum_probs=159.3
Q ss_pred cccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCCCCc-cchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++|++||||| ++|||+++|++|+++|++ |++++|+.+.. +.+. +..+.++.++++|++++++++++++++
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ--LVLTGFDRLRLIQRIT---DRLPAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE--EEEEECSCHHHHHHHH---TTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCE--EEEEecChHHHHHHHH---HhcCCCceEEEccCCCHHHHHHHHHHH
Confidence 478999999999 999999999999999997 88889976442 2222 233567889999999999999999999
Q ss_pred HHHcC---CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 102 KEKYG---SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 102 ~~~~g---~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
.+++| ++|+||||||...+.. ....++.+.+.++|++.+++|+.+++.++++++|+|.++ ++||++|
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~is 148 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTG--MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--------GSIVGMD 148 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGG--STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEE
T ss_pred HHHhCCCCCceEEEECCccCcccc--ccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--------CeEEEEc
Confidence 99999 9999999999762000 003567888999999999999999999999999999753 3999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+ .+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 149 s~~~-~~---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~-vn~v~PG~v~T 196 (269)
T 2h7i_A 149 FDPS-RA---MPAYNWMTVAKSALESVNRFVAREAGKYGVR-SNLVAAGPIRT 196 (269)
T ss_dssp CCCS-SC---CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCCCC
T ss_pred Cccc-cc---cCchHHHHHHHHHHHHHHHHHHHHhcccCcE-EEEEecCcccc
Confidence 8765 33 6778899999999999999999999999999 77999999985
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=240.03 Aligned_cols=183 Identities=17% Similarity=0.186 Sum_probs=159.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++|++|||||++|||+++|++|+++|++ |++.+|+.+..+.+.+.+. ..+.++.++++|++|+++++++++++.+++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYA--LALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999997 9999999877776554433 446789999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ +++|+++|..+..+
T Consensus 79 g~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~ii~~sS~~~~~~ 144 (235)
T 3l77_A 79 GDVDVVVANAGLG-------YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-------GLALVTTSDVSARL 144 (235)
T ss_dssp SSCSEEEECCCCC-------CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEECCGGGSSC
T ss_pred CCCCEEEECCccc-------cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------CcEEEEecchhccc
Confidence 9999999999987 356778899999999999999999999999999995433 38899998887766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+++++|++++ ++.+.||+ +|+|+||.+++
T Consensus 145 ---~~~~~~Y~~sKaa~~~~~~~l--~~~~~~i~-v~~v~PG~v~T 184 (235)
T 3l77_A 145 ---IPYGGGYVSTKWAARALVRTF--QIENPDVR-FFELRPGAVDT 184 (235)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHH--HHHCTTSE-EEEEEECSBSS
T ss_pred ---CCCcchHHHHHHHHHHHHHHH--hhcCCCeE-EEEEeCCcccc
Confidence 677889999999999999999 55578999 77999999975
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=240.05 Aligned_cols=188 Identities=21% Similarity=0.285 Sum_probs=147.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|++|||||++|||++++++|+++|++ |+++ .|+....+.+.+.+...+.++.++.+|++|+++++++++++.+
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~--V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGAN--IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999997 7776 6666665555555555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+.
T Consensus 80 ~~~~~d~vi~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~ 146 (247)
T 2hq1_A 80 AFGRIDILVNNAGIT-------RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG------KIINITSIAGI 146 (247)
T ss_dssp HHSCCCEEEECC----------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE------EEEEECC----
T ss_pred hcCCCCEEEECCCCC-------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhc
Confidence 999999999999976 34556778888999999999999999999999999876554 99999998877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++.++++++.|+++.||+ +|++.||.+++
T Consensus 147 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 190 (247)
T 2hq1_A 147 IG---NAGQANYAASKAGLIGFTKSIAKEFAAKGIY-CNAVAPGIIKT 190 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cC---CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEEEEEEec
Confidence 76 5778899999999999999999999999999 77999999874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=239.89 Aligned_cols=191 Identities=19% Similarity=0.285 Sum_probs=166.9
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.++..+.++.++++|++|+++++++++++.
T Consensus 8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGAR--VIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999996 8889998766655555555556789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||... +..++.+.+.++|++.+++|+.+++.+++++.|.|.+++.+ +||++||..+
T Consensus 86 ~~~~~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~ 153 (260)
T 3awd_A 86 EQEGRVDILVACAGICI------SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG------VIVAIGSMSG 153 (260)
T ss_dssp HHHSCCCEEEECCCCCC------CSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred HHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC------EEEEEecchh
Confidence 99999999999999763 24566788899999999999999999999999999876554 9999999887
Q ss_pred ccCCCCCCCc--cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGW--HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++. ..|+++|++++.++++++.|++++||+ +|+|.||.+++
T Consensus 154 ~~~---~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~-v~~v~pg~v~t 200 (260)
T 3awd_A 154 LIV---NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIR-ANAVAPTYIET 200 (260)
T ss_dssp TSC---CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred ccc---CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeeeecc
Confidence 765 4444 789999999999999999999999999 67999999864
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=239.39 Aligned_cols=189 Identities=20% Similarity=0.281 Sum_probs=166.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++|++|||||++|||++++++|+++|++ |++++| +.+..+.+.+.+...+.++.++.+|++++++++++++++.
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999997 888898 6555555555555556788999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~ 181 (231)
++++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .+ +||++||..
T Consensus 81 ~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~------~iv~isS~~ 147 (261)
T 1gee_A 81 KEFGKLDVMINNAGLEN-------PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG------TVINMSSVH 147 (261)
T ss_dssp HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC------EEEEECCGG
T ss_pred HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCC------EEEEeCCHH
Confidence 99999999999999763 45667888999999999999999999999999998765 44 999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|++++.++++++.|++++||+ +|+|.||.+++
T Consensus 148 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 193 (261)
T 1gee_A 148 EKIP---WPLFVHYAASKGGMKLMTETLALEYAPKGIR-VNNIGPGAINT 193 (261)
T ss_dssp GTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred hcCC---CCCccHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEeeCCcCC
Confidence 7765 6778899999999999999999999999999 67999999864
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=242.44 Aligned_cols=197 Identities=15% Similarity=0.199 Sum_probs=163.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+.+ +.++.++++|++++++++++++++
T Consensus 25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~--Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~- 98 (281)
T 3ppi_A 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLG--VVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA- 98 (281)
T ss_dssp CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-
Confidence 45789999999999999999999999999997 899999876665544443 568999999999999999999999
Q ss_pred HHcCCccEEEEc-cccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKYGSLNLLINA-SGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~g~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++++++|++||| +|....... ......+.+.++|++.+++|+.+++++++.++|.|.+.........++||++||..
T Consensus 99 ~~~~~id~lv~~aag~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 176 (281)
T 3ppi_A 99 NQLGRLRYAVVAHGGFGVAQRI--VQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA 176 (281)
T ss_dssp TTSSEEEEEEECCCCCCCCCCS--BCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG
T ss_pred HHhCCCCeEEEccCcccccccc--cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc
Confidence 888999999999 554421100 11112467888999999999999999999999999773211111235999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 177 ~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 222 (281)
T 3ppi_A 177 GYEG---QIGQTAYAAAKAGVIGLTIAAARDLSSAGIR-VNTIAPGTMKT 222 (281)
T ss_dssp GTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ccCC---CCCCcccHHHHHHHHHHHHHHHHHHhhcCeE-EEEEecCcCCc
Confidence 8877 6888999999999999999999999999999 77999999975
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=237.91 Aligned_cols=186 Identities=15% Similarity=0.161 Sum_probs=164.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCC-------ccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKND-------KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~-------~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++|++|||||++|||++++++|+++|+ + |++.+|+.+..+.+.+.+...+.++.++.+|++++++++++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPV--LVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTT 78 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEE--EEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceE--EEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence 378999999999999999999999999 7 8888998766666555555556789999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +||++||
T Consensus 79 ~~~~~~g~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS 145 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVG-------RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG------HIFFITS 145 (244)
T ss_dssp HHHHHTSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred HHHHhCCCCCEEEEcCCcC-------CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEEec
Confidence 9999999999999999976 35567788999999999999999999999999999876554 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .++...|+++|+++++++++++.|++++||+ +|+|+||.+++
T Consensus 146 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 193 (244)
T 2bd0_A 146 VAATKA---FRHSSIYCMSKFGQRGLVETMRLYARKCNVR-ITDVQPGAVYT 193 (244)
T ss_dssp GGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCBCS
T ss_pred chhcCC---CCCCchhHHHHHHHHHHHHHHHHHhhccCcE-EEEEECCCccc
Confidence 987766 6778899999999999999999999999999 66999999864
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=244.32 Aligned_cols=190 Identities=21% Similarity=0.238 Sum_probs=168.1
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||++++++|++.|++ |++.+|+++..+.+.+.++..+.++.++.+|++|+++++++++++.
T Consensus 39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSE--EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999997 7778888766666555555556789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ +||++||..+
T Consensus 117 ~~~~~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~ 183 (285)
T 2c07_A 117 TEHKNVDILVNNAGIT-------RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG------RIINISSIVG 183 (285)
T ss_dssp HHCSCCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE------EEEEECCTHH
T ss_pred HhcCCCCEEEECCCCC-------CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECChhh
Confidence 9999999999999986 34567788899999999999999999999999999876544 9999999987
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|++++.++++++.|+++.||+ +|+|.||.+++
T Consensus 184 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 228 (285)
T 2c07_A 184 LTG---NVGQANYSSSKAGVIGFTKSLAKELASRNIT-VNAIAPGFISS 228 (285)
T ss_dssp HHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ccC---CCCCchHHHHHHHHHHHHHHHHHHHHHhCcE-EEEEEeCcEec
Confidence 766 6778899999999999999999999999999 67999999874
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=240.50 Aligned_cols=187 Identities=15% Similarity=0.225 Sum_probs=158.6
Q ss_pred ccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 26 ~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++|++|||||+ +|||++++++|+++|++ |++++|+. ..+. +.+.....+ ...++++|++++++++++++++.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHH
Confidence 789999999999 99999999999999997 88889987 3333 333323323 34789999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccch-hchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+++|++|+||||||...+.. ...++.+ .+.++|++.+++|+.+++.++++++|.|.+. ++||++||..
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~ 151 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQ---LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--------SALLTLSYLG 151 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGG---GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGG
T ss_pred HHcCCCCEEEECCCCCCccc---cCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEEcchh
Confidence 99999999999999763000 0245667 8899999999999999999999999999642 3999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 152 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 197 (265)
T 1qsg_A 152 AERA---IPNYNVMGLAKASLEANVRYMANAMGPEGVR-VNAISAGPIRT 197 (265)
T ss_dssp GTSB---CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCCCC
T ss_pred hccC---CCCchHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEEeCCCcc
Confidence 7766 6778899999999999999999999999999 77999999874
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=238.62 Aligned_cols=192 Identities=18% Similarity=0.220 Sum_probs=163.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.. +.++.++++|++|+++++++++++.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 888999887766544433 56789999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccc------hhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLN------KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
+++++|+||||||... ...+. +.+.++|++.+++|+.+++.+++++.|.|.++........++||++
T Consensus 83 ~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~i 155 (265)
T 2o23_A 83 KFGRVDVAVNCAGIAV-------ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINT 155 (265)
T ss_dssp HHSCCCEEEECCCCCC-------CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEE
T ss_pred HCCCCCEEEECCccCC-------CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEe
Confidence 9999999999999763 22222 4688899999999999999999999999987621111112599999
Q ss_pred ccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+..+ .++...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 156 sS~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 205 (265)
T 2o23_A 156 ASVAAFEG---QVGQAAYSASKGGIVGMTLPIARDLAPIGIR-VMTIAPGLFGT 205 (265)
T ss_dssp CCTHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred CChhhcCC---CCCCchhHHHHHHHHHHHHHHHHHHhhcCcE-EEEEEeccccC
Confidence 99988766 6778899999999999999999999999999 77999999874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=269.19 Aligned_cols=183 Identities=20% Similarity=0.255 Sum_probs=158.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC---------CCccchhhhhhcCCCceeEEEecCCChHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v 94 (231)
++++||++|||||++|||+++|+.|+++|++ |++.+++. +.++.+.+++...+.++ .+|++|.+++
T Consensus 4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~--Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~ 78 (604)
T 2et6_A 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAK--VVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDG 78 (604)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCE--EEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHH
Confidence 5688999999999999999999999999997 88887754 34444444444434433 3699999899
Q ss_pred HHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEE
Q 026924 95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV 174 (231)
Q Consensus 95 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 174 (231)
+++++++.+++|+||+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++.| +|
T Consensus 79 ~~~v~~~~~~~G~iDiLVnNAGi~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G------~I 145 (604)
T 2et6_A 79 DKIVETAVKNFGTVHVIINNAGIL-------RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG------RI 145 (604)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EE
Confidence 999999999999999999999986 35678889999999999999999999999999999887665 99
Q ss_pred EEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 175 ANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 175 v~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
|++||..+..+ .+++..|++||+|+.+|+++++.|++++||+ +|+|+||.
T Consensus 146 VnisS~ag~~~---~~~~~~Y~asKaal~~lt~~la~El~~~gIr-Vn~v~Pg~ 195 (604)
T 2et6_A 146 VNTSSPAGLYG---NFGQANYASAKSALLGFAETLAKEGAKYNIK-ANAIAPLA 195 (604)
T ss_dssp EEECCHHHHHC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECC
T ss_pred EEECCHHHcCC---CCCchHHHHHHHHHHHHHHHHHHHhCccCeE-EEEEccCC
Confidence 99999998877 6888999999999999999999999999999 78999983
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=240.65 Aligned_cols=190 Identities=19% Similarity=0.243 Sum_probs=156.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++++++++++++++.
T Consensus 9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999996 8888998766666555554456689999999999999999999999
Q ss_pred HHc-CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..
T Consensus 87 ~~~~~~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~ 153 (266)
T 1xq1_A 87 SMFGGKLDILINNLGAI-------RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG------NIIFMSSIA 153 (266)
T ss_dssp HHHTTCCSEEEEECCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------EEEEEC---
T ss_pred HHhCCCCcEEEECCCCC-------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEccch
Confidence 999 8999999999976 34566778899999999999999999999999999876654 999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 154 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 199 (266)
T 1xq1_A 154 GVVS---ASVGSIYSATKGALNQLARNLACEWASDGIR-ANAVAPAVIAT 199 (266)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEECCSCC-
T ss_pred hccC---CCCCchHHHHHHHHHHHHHHHHHHHhHhCcE-EEEEeeCCCcc
Confidence 7766 5777899999999999999999999999999 67999999863
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=245.14 Aligned_cols=196 Identities=24% Similarity=0.282 Sum_probs=160.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCCh-HHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVE-STIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~-~~v~~~~~~~~ 102 (231)
.+++|++|||||++|||+++|++|+++|++ |++++|+.+..+...+.+... +.++.++.+|++++ ++++++++++.
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIM--VVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 568999999999999999999999999996 999999987777655444433 45899999999998 99999999999
Q ss_pred HHcCCccEEEEccccCCCCCC-----------------------CCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 103 EKYGSLNLLINASGILSIPNV-----------------------LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
++++++|+||||||+..+... ......+.+.+.++|++.+++|+.+++.++++++|.
T Consensus 87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence 999999999999998631000 000123456688899999999999999999999999
Q ss_pred hhcCCCCcccCceEEEEeccCccccCCCC----------------------------------------CCCccchhhhH
Q 026924 160 LKVGGTGIERDVAVVANLSARVGSIGDNR----------------------------------------LGGWHSYRASK 199 (231)
Q Consensus 160 l~~~~~~~~~~~~~iv~iss~~~~~~~~~----------------------------------------~~~~~~y~~sK 199 (231)
|++++.+ +||++||..+..+... .++...|++||
T Consensus 167 l~~~~~~------~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK 240 (311)
T 3o26_A 167 LQLSDSP------RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSK 240 (311)
T ss_dssp HTTSSSC------EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHH
T ss_pred hccCCCC------eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHH
Confidence 9887665 9999999987654210 13556899999
Q ss_pred HHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 200 AALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 200 ~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+|+++|+++++.|+.+ |+ +|+|+||.|++
T Consensus 241 ~a~~~~~~~la~e~~~--i~-v~~v~PG~v~T 269 (311)
T 3o26_A 241 ACLNAYTRVLANKIPK--FQ-VNCVCPGLVKT 269 (311)
T ss_dssp HHHHHHHHHHHHHCTT--SE-EEEECCCSBCS
T ss_pred HHHHHHHHHHHhhcCC--ce-EEEecCCceec
Confidence 9999999999999964 88 77999999975
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=238.46 Aligned_cols=190 Identities=23% Similarity=0.288 Sum_probs=166.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CCCceeEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.+.. .+.++.++.+|++|+++++++++++
T Consensus 2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGST--VIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 35678999999999999999999999999996 88899987665554444332 3568899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ +||++||..
T Consensus 80 ~~~~~~~d~vi~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~ 146 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGIT-------RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG------RIVNISSVV 146 (248)
T ss_dssp HHHSSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCE------EEEEECCHH
T ss_pred HHhcCCCCEEEECCCCC-------CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEEccHH
Confidence 99999999999999976 34567788899999999999999999999999999876554 999999987
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|++++.+++.++.|+++.||+ +|++.||.+++
T Consensus 147 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~Pg~v~t 192 (248)
T 2pnf_A 147 GFTG---NVGQVNYSTTKAGLIGFTKSLAKELAPRNVL-VNAVAPGFIET 192 (248)
T ss_dssp HHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred hcCC---CCCCchHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeceecC
Confidence 7766 5777899999999999999999999999999 67999999863
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=239.77 Aligned_cols=189 Identities=20% Similarity=0.242 Sum_probs=163.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-------CceeEEEecCCChHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-------ERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~Dls~~~~v~~ 96 (231)
.++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+ .++.++++|++|++++++
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 80 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGAT--VAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC 80 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence 3578999999999999999999999999996 8889998766555444433333 578899999999999999
Q ss_pred HHHHHHHHcCCc-cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEE
Q 026924 97 SAKSIKEKYGSL-NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVV 174 (231)
Q Consensus 97 ~~~~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~i 174 (231)
+++++.+.++++ |+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ . ++|
T Consensus 81 ~~~~~~~~~g~i~d~vi~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------g~i 147 (264)
T 2pd6_A 81 LLEQVQACFSRPPSVVVSCAGIT-------QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCR------GSI 147 (264)
T ss_dssp HHHHHHHHHSSCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEE
T ss_pred HHHHHHHHhCCCCeEEEECCCcC-------CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC------ceE
Confidence 999999999999 9999999976 355677889999999999999999999999999998754 3 399
Q ss_pred EEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 175 ANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 175 v~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|++||..+..+ .++...|+++|++++.+++.++.|++++||+ +|+|.||.+++
T Consensus 148 v~isS~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 200 (264)
T 2pd6_A 148 INISSIVGKVG---NVGQTNYAASKAGVIGLTQTAARELGRHGIR-CNSVLPGFIAT 200 (264)
T ss_dssp EEECCTHHHHC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred EEECChhhccC---CCCChhhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeecccc
Confidence 99999887766 6778899999999999999999999999999 67999998863
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=242.45 Aligned_cols=188 Identities=18% Similarity=0.264 Sum_probs=165.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.++..+.++.++.+|++|+++++++++++.+
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 88899987666665555555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ +||++||..+.
T Consensus 105 ~~g~iD~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~~ 171 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVY-------TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG------HIVTVASAAGH 171 (272)
T ss_dssp HTCCCSEEEECCCCCC-------CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCC-C
T ss_pred HCCCCcEEEECCCcCC-------CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEechhhc
Confidence 9999999999999763 4567788889999999999999999999999999877654 99999999877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhcc---ccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWS---KEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~---~~gi~~~~~v~pg~~~ 230 (231)
.+ .++...|+++|++++.++++++.|++ +.||+ +|+|.||.++
T Consensus 172 ~~---~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~-v~~v~Pg~v~ 217 (272)
T 1yb1_A 172 VS---VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVK-TTCLCPNFVN 217 (272)
T ss_dssp CC---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE-EEEEEETHHH
T ss_pred CC---CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EEEEeCCccc
Confidence 65 56778899999999999999999997 67999 6699999875
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=245.81 Aligned_cols=193 Identities=14% Similarity=0.078 Sum_probs=158.5
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccc------------hhhhhhcCCCceeEEEecCCChH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVES 92 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~Dls~~~ 92 (231)
-.+|++|||||++|||+++|+.|++ .|++ |++++++.+..+. ..+..+..+.++..+.+|+++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~--Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~ 122 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGAD--TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDE 122 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCE--EEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 3589999999999999999999999 9997 8888887655432 23344555778999999999999
Q ss_pred HHHHHHHHHHHHcCCccEEEEccccCCC--CCC----CCCCcc---------------------cchhchHHHhhhhhhh
Q 026924 93 TIEASAKSIKEKYGSLNLLINASGILSI--PNV----LQPETT---------------------LNKVEKSSLMLAYEVN 145 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag~~~~--~~~----~~~~~~---------------------~~~~~~~~~~~~~~~n 145 (231)
+++++++++.+++|++|+||||||.... |.+ .....+ +.+.+.++|++.+++|
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 9999999999999999999999997410 000 000122 3678999999999999
Q ss_pred hhHHH-HHHHHhhh-hhhcCCCCcccCceEEEEeccCccccCCCCCCCc--cchhhhHHHHHHHHHHhhhhcccc-CCce
Q 026924 146 AVGPI-LVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNHDKICVSGVWSKE-GSSY 220 (231)
Q Consensus 146 ~~~~~-~~~~~~~~-~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~-gi~~ 220 (231)
..+.| .+++++.+ .|.++ . ++||++||+.+..+ .+.+ ..|++||+++++++++++.|++++ |||
T Consensus 203 ~~~~~~~~~~~~~~~~m~~~-g------G~IVniSSi~~~~~---~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIR- 271 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLAE-G------AQTTAFTYLGEKIT---HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGD- 271 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEEE-E------EEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCE-
T ss_pred chhHHHHHHHHHHHHhhhhC-C------cEEEEEeCchhhCc---CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeE-
Confidence 99998 78888765 45443 2 49999999998877 5766 899999999999999999999999 999
Q ss_pred eeeccCCCCCC
Q 026924 221 MYSVASRHCRY 231 (231)
Q Consensus 221 ~~~v~pg~~~~ 231 (231)
+|+|+||.+++
T Consensus 272 VNaVaPG~i~T 282 (405)
T 3zu3_A 272 ARVSVLKAVVS 282 (405)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEEeCCCcC
Confidence 88999999985
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=232.80 Aligned_cols=183 Identities=24% Similarity=0.261 Sum_probs=157.8
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.. .++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 3 GMKGAVLITGASRGIGEATARLLHAKGYR--VGLMARDEKRLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp -CCCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999996 888899865544443322 268889999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||..+..+
T Consensus 77 ~~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~ 143 (234)
T 2ehd_A 77 GELSALVNNAGVG-------VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG------TIVNVGSLAGKNP 143 (234)
T ss_dssp SCCCEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCTTTTSC
T ss_pred CCCCEEEECCCcC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------EEEEECCchhcCC
Confidence 9999999999976 34567788999999999999999999999999999877654 9999999887765
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.++++++.|++++||+ +|+|.||.+++
T Consensus 144 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 185 (234)
T 2ehd_A 144 ---FKGGAAYNASKFGLLGLAGAAMLDLREANVR-VVNVLPGSVDT 185 (234)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEECC----
T ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHhhcCcE-EEEEEeCCCcC
Confidence 6778899999999999999999999999999 67999999864
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-35 Score=235.36 Aligned_cols=188 Identities=21% Similarity=0.282 Sum_probs=164.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.... ..++.++.+|++++++++++++++.++
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999997 88899987655554443332 257899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ ++||++||..+..
T Consensus 80 ~~~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~-----~~iv~isS~~~~~ 147 (251)
T 1zk4_A 80 FGPVSTLVNNAGIA-------VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFV 147 (251)
T ss_dssp HSSCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-----EEEEEECCGGGTS
T ss_pred hCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-----CEEEEeCCchhcc
Confidence 99999999999976 34566788899999999999999999999999999877641 3999999988776
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|++++.++++++.|+. +.||+ +|+|+||.+++
T Consensus 148 ~---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~-v~~v~Pg~v~t 192 (251)
T 1zk4_A 148 G---DPSLGAYNASKGAVRIMSKSAALDCALKDYDVR-VNTVHPGYIKT 192 (251)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEE-EEEEEECCBCC
T ss_pred C---CCCCccchHHHHHHHHHHHHHHHHhcccCCCeE-EEEEeeCcCcc
Confidence 6 67788999999999999999999998 89999 67999999874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=235.44 Aligned_cols=188 Identities=21% Similarity=0.331 Sum_probs=162.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-hcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+ ...+.++.++++|++|+++++++++++.++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDR--VAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999996 888999876665544443 33456899999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+||||||...+. +...+.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ +||++||..+..+
T Consensus 80 ~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~- 148 (250)
T 2cfc_A 80 AIDVLVNNAGITGNS----EAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG------VIVNIASVASLVA- 148 (250)
T ss_dssp CCCEEEECCCCCCCT----TCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSC-
T ss_pred CCCEEEECCCCCCCC----CcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECChhhccC-
Confidence 999999999976310 11227788899999999999999999999999999876654 9999999887766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.++++++.|++++||+ +|++.||.+++
T Consensus 149 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 190 (250)
T 2cfc_A 149 --FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR-CNAVCPGMIET 190 (250)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeCcCcc
Confidence 6778899999999999999999999999999 67999999864
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=236.03 Aligned_cols=179 Identities=22% Similarity=0.266 Sum_probs=154.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+. .. .++.++.+|++|+++++ ++.++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~ 71 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANE 71 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHH
Confidence 468999999999999999999999999996 888899865544433 11 26889999999999987 44456
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..
T Consensus 72 ~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~ 138 (246)
T 2ag5_A 72 VERLDVLFNVAGFVH-------HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG------NIINMSSVASSV 138 (246)
T ss_dssp CSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTTT
T ss_pred hCCCCEEEECCccCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEEEEechHhCc
Confidence 789999999999863 4567888999999999999999999999999999876654 999999988776
Q ss_pred CCCCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+ +...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 139 ~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 182 (246)
T 2ag5_A 139 K---GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR-CNCVCPGTVDT 182 (246)
T ss_dssp B---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCEEC
T ss_pred C---CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEeeCcCcC
Confidence 6 45 77899999999999999999999999999 77999999864
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=235.67 Aligned_cols=195 Identities=17% Similarity=0.262 Sum_probs=164.2
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh-hhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+.+++++|++|||||++|||++++++|+++|++ |++++|+.+..+... ++.+..+.++.++.+|++|++++++++++
T Consensus 8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 85 (265)
T 1h5q_A 8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ 85 (265)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHH
Confidence 345678999999999999999999999999996 888899766554432 33233356899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.++++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ ++||++||.
T Consensus 86 ~~~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~ 153 (265)
T 1h5q_A 86 IDADLGPISGLIANAGVSV-------VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-----GSIVVTSSM 153 (265)
T ss_dssp HHHHSCSEEEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCG
T ss_pred HHHhcCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCC-----ceEEEeCCc
Confidence 9999999999999999863 4567788999999999999999999999999999765431 499999998
Q ss_pred ccccCCC----CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDN----RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+.. +..+...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 207 (265)
T 1h5q_A 154 SSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR-VNALSPGYVNT 207 (265)
T ss_dssp GGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred hhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcE-EEEEecCcccc
Confidence 7765421 01126789999999999999999999999999 66999999874
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=238.55 Aligned_cols=185 Identities=22% Similarity=0.255 Sum_probs=149.3
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
....++++|++|||||++|||+++|++|+++|++ |++.+|+.+..+.+.+.. ..++.++.+|+++.+++.+++++
T Consensus 7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSK--VIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT
T ss_pred cccccCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh
Confidence 4445778999999999999999999999999997 889999876655544433 45788999999999999887765
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
. +++|++|||||... ...+.+.+.++|++.+++|+.+++.++++++|.|.+++.| +||++||.
T Consensus 82 ~----~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g------~iv~isS~ 144 (249)
T 3f9i_A 82 T----SNLDILVCNAGITS-------DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG------RIINISSI 144 (249)
T ss_dssp C----SCCSEEEECCC--------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCC
T ss_pred c----CCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc------EEEEEccH
Confidence 4 78999999999873 4566778889999999999999999999999999877654 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 145 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 191 (249)
T 3f9i_A 145 VGIAG---NPGQANYCASKAGLIGMTKSLSYEVATRGIT-VNAVAPGFIKS 191 (249)
T ss_dssp CC--C---CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBC-
T ss_pred HhccC---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcE-EEEEecCcccc
Confidence 88877 6888899999999999999999999999999 77999999874
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=250.12 Aligned_cols=192 Identities=14% Similarity=0.081 Sum_probs=157.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccc------------hhhhhhcCCCceeEEEecCCChHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVEST 93 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~Dls~~~~ 93 (231)
.+|++|||||++|||+++|+.|++ .|++ |++++|+.+..+. ..+..+..+.++..+.+|++++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~--Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~ 137 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGAD--TLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAA 137 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCE--EEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence 489999999999999999999999 9997 8888988765543 224445567789999999999999
Q ss_pred HHHHHHHHHHHc-CCccEEEEccccCCC--C-------CCCCCCc------------------ccchhchHHHhhhhhhh
Q 026924 94 IEASAKSIKEKY-GSLNLLINASGILSI--P-------NVLQPET------------------TLNKVEKSSLMLAYEVN 145 (231)
Q Consensus 94 v~~~~~~~~~~~-g~id~lv~~ag~~~~--~-------~~~~~~~------------------~~~~~~~~~~~~~~~~n 145 (231)
++++++++.+++ |+||+||||||.... | ....+.. .+.+.+.++|++.+++|
T Consensus 138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn 217 (422)
T 3s8m_A 138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM 217 (422)
T ss_dssp HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence 999999999999 999999999986210 0 0000110 12467899999999999
Q ss_pred hhHHH-HHHHHhhhh-hhcCCCCcccCceEEEEeccCccccCCCCCCCc--cchhhhHHHHHHHHHHhhhhccccCCcee
Q 026924 146 AVGPI-LVIKHMSPL-LKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNHDKICVSGVWSKEGSSYM 221 (231)
Q Consensus 146 ~~~~~-~~~~~~~~~-l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~~~ 221 (231)
..+.| .+++++.+. |.++ . ++||++||+.+..+ .|.+ ..|++||+|+.+|+++++.|++++||| +
T Consensus 218 ~~~~~~~~~~a~~~~~m~~~-g------G~IVniSSi~g~~~---~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIR-V 286 (422)
T 3s8m_A 218 GGQDWELWIDALEGAGVLAD-G------ARSVAFSYIGTEIT---WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGG-A 286 (422)
T ss_dssp SSHHHHHHHHHHHHTTCEEE-E------EEEEEEEECCCGGG---HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCE-E
T ss_pred chhHHHHHHHHHHHHHHhhC-C------CEEEEEeCchhhcc---CCCccchHHHHHHHHHHHHHHHHHHHhCccCEE-E
Confidence 99997 788887654 4433 2 49999999998876 5655 899999999999999999999999999 8
Q ss_pred eeccCCCCCC
Q 026924 222 YSVASRHCRY 231 (231)
Q Consensus 222 ~~v~pg~~~~ 231 (231)
|+|+||.|++
T Consensus 287 NaVaPG~i~T 296 (422)
T 3s8m_A 287 NVAVLKSVVT 296 (422)
T ss_dssp EEEEECCCCC
T ss_pred EEEEcCCCcC
Confidence 8999999985
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=234.53 Aligned_cols=173 Identities=24% Similarity=0.238 Sum_probs=152.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.++|++|||||++|||+++|++|++ .|+. |++.+|+++.. ..++.++++|++|+++++++++.++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~--v~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~-- 67 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHT--VINIDIQQSFS----------AENLKFIKADLTKQQDITNVLDIIK-- 67 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEE--EEEEESSCCCC----------CTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcE--EEEeccccccc----------cccceEEecCcCCHHHHHHHHHHHH--
Confidence 3689999999999999999999999 6775 88888876421 2356889999999999999996554
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+++ ++||++||..+..
T Consensus 68 ~~~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~ 132 (244)
T 4e4y_A 68 NVSFDGIFLNAGILI-------KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--------ASIVFNGSDQCFI 132 (244)
T ss_dssp TCCEEEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--------EEEEEECCGGGTC
T ss_pred hCCCCEEEECCccCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--------cEEEEECCHHHcc
Confidence 789999999999873 5678889999999999999999999999999999764 3999999998877
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.|++
T Consensus 133 ~---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 175 (244)
T 4e4y_A 133 A---KPNSFAYTLSKGAIAQMTKSLALDLAKYQIR-VNTVCPGTVDT 175 (244)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEESCBCC
T ss_pred C---CCCCchhHHHHHHHHHHHHHHHHHHHHcCeE-EEEEecCccCc
Confidence 6 6888899999999999999999999999999 77999999975
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-35 Score=236.19 Aligned_cols=192 Identities=21% Similarity=0.262 Sum_probs=166.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++|++|||||+||||++++++|+++|++ |++++|+ .+..+.+.+.+...+.++.++.+|++++++++++++++.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAK--VGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999997 8889998 6666665555555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC--CCcccCceEEEEeccCc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSARV 181 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~--~~~~~~~~~iv~iss~~ 181 (231)
+++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ . +..++||++||..
T Consensus 82 ~~g~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~ 152 (258)
T 3afn_B 82 KFGGIDVLINNAGGLV------GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS---GQTSAVISTGSIA 152 (258)
T ss_dssp HHSSCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH---TSCEEEEEECCTH
T ss_pred HcCCCCEEEECCCCcC------CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCC---CCCcEEEEecchh
Confidence 9999999999999732 355677888999999999999999999999999987543 1 0114999999988
Q ss_pred ccc-CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSI-GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~-~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+.. + .++...|+++|++++.+++.++.|++++||+ +|+|.||.+++
T Consensus 153 ~~~~~---~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~-v~~v~Pg~v~t 199 (258)
T 3afn_B 153 GHTGG---GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVR-FNIVSPGTVDT 199 (258)
T ss_dssp HHHCC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBSS
T ss_pred hccCC---CCCchHHHHHHHHHHHHHHHHHHhhcccCeE-EEEEeCCCccc
Confidence 765 4 5778899999999999999999999999999 67999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=264.38 Aligned_cols=182 Identities=25% Similarity=0.295 Sum_probs=159.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++++||++|||||++|||+++|++|+++|++ |++.+++ ..+.+.+++...+.++..+.+|++ ++.+++++++.+
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~--Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~ 391 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAK--VVVNDFK--DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVID 391 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEECSS--CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCE--EEEEeCc--cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHH
Confidence 4688999999999999999999999999997 8777763 234444444445667888888884 556788999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++.| +||++||..+.
T Consensus 392 ~~G~iDiLVnNAGi~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IVnisS~ag~ 458 (604)
T 2et6_A 392 KYGTIDILVNNAGIL-------RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG------RIINITSTSGI 458 (604)
T ss_dssp HHSCCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCHHHH
T ss_pred hcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEECChhhc
Confidence 999999999999987 35678889999999999999999999999999999887665 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
.+ .+++..|++||+|+.+|+++++.|++++||+ +|+|+||.
T Consensus 459 ~~---~~~~~~Y~asKaal~~lt~~la~El~~~gIr-Vn~v~PG~ 499 (604)
T 2et6_A 459 YG---NFGQANYSSSKAGILGLSKTMAIEGAKNNIK-VNIVAPHA 499 (604)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECC
T ss_pred cC---CCCChhHHHHHHHHHHHHHHHHHHhCccCeE-EEEEcCCC
Confidence 77 6888899999999999999999999999999 78999994
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=236.61 Aligned_cols=192 Identities=16% Similarity=0.202 Sum_probs=164.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.++....+.++.++.+|++++++++++++++.
T Consensus 29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGAD--VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE 106 (279)
T ss_dssp GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCE--EEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence 34688999999999999999999999999997 8889998877666655555446789999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccc-hhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLN-KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+.++++|+||||||... ...++. +.+.++|++.+++|+.+++.+++.+++.|++++.+ +||++||..
T Consensus 107 ~~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------~iv~isS~~ 174 (279)
T 3ctm_A 107 KDFGTIDVFVANAGVTW------TQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG------SLIITSSIS 174 (279)
T ss_dssp HHHSCCSEEEECGGGST------TC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCCT
T ss_pred HHhCCCCEEEECCcccc------cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEECchH
Confidence 99999999999999763 214455 77889999999999999999999999999876654 999999988
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+. +.++...|+++|++++.++++++.|++++| + +|+|+||.+++
T Consensus 175 ~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~-v~~v~Pg~v~t 221 (279)
T 3ctm_A 175 GKIVN-IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-R-VNTISPGYIDT 221 (279)
T ss_dssp TSCC----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-E-EEEEEECSBSS
T ss_pred hccCC-CCCCcccHHHHHHHHHHHHHHHHHHhcccC-C-EEEEeccCCcc
Confidence 76541 135677899999999999999999999999 8 77999999874
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=234.89 Aligned_cols=188 Identities=20% Similarity=0.258 Sum_probs=164.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.+
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999996 88899987666655555555567899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|.|++++.+ +||++||..+.
T Consensus 85 ~~~~~d~vi~~Ag~~~-------~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~ 150 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAAE 150 (255)
T ss_dssp HHSSCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred hcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhc
Confidence 9999999999999763 2333 67889999999999999999999999999876544 99999998876
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++.+++.++.|+++.||+ +|++.||.+++
T Consensus 151 ~~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~-v~~v~Pg~v~t 194 (255)
T 1fmc_A 151 NK---NINMTSYASSKAAASHLVRNMAFDLGEKNIR-VNGIAPGAILT 194 (255)
T ss_dssp CC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECSBCS
T ss_pred CC---CCCCcccHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecccCcc
Confidence 55 5777899999999999999999999999999 67999999863
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=234.23 Aligned_cols=175 Identities=13% Similarity=0.107 Sum_probs=154.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.++|++|||||++|||++++++|+++|++ |++++|+.+..+ ....++++|++|+++++++++++.+++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999997 888899875532 135678899999999999999999999
Q ss_pred --CCccEEEEccccCCCCCCCCCCccc-chhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 106 --GSLNLLINASGILSIPNVLQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 106 --g~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|.|++. ++||++||..+
T Consensus 73 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~ 137 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWA-------GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--------GLLTLAGAKAA 137 (241)
T ss_dssp TTCCEEEEEECCCCCC-------CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGG
T ss_pred CCCCCCEEEEcccccC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--------CEEEEECCHHH
Confidence 79999999999763 3455 678889999999999999999999999999652 39999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+++++|+++++.|++ ++||+ +|+|+||.+++
T Consensus 138 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~-v~~v~PG~v~T 184 (241)
T 1dhr_A 138 LDG---TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA-AIAVLPVTLDT 184 (241)
T ss_dssp GSC---CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCE-EEEEEESCEEC
T ss_pred ccC---CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeE-EEEEecCcccC
Confidence 766 67888999999999999999999999 99999 77999999874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=233.13 Aligned_cols=178 Identities=19% Similarity=0.206 Sum_probs=155.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||++++++|+++|++ |++++|+.+. +.+.. + +.++++|+++ ++++++++++.+.+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~--V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYR--VAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 689999999999999999999999997 8888998654 22222 2 7889999999 9999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..+.
T Consensus 71 id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~~- 136 (239)
T 2ekp_A 71 LHVLVHAAAVNV-------RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG------RVLFIGSVTTFTAG- 136 (239)
T ss_dssp CCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSCC-
T ss_pred CCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchhhccCC-
Confidence 999999999763 4567788999999999999999999999999999876654 99999998877652
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+.++...|++||+++++++++++.|++++||+ +|+|+||.+++
T Consensus 137 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 179 (239)
T 2ekp_A 137 GPVPIPAYTTAKTALLGLTRALAKEWARLGIR-VNLLCPGYVET 179 (239)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEEeCCccC
Confidence 11677899999999999999999999999999 77999999874
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=232.85 Aligned_cols=202 Identities=28% Similarity=0.376 Sum_probs=164.4
Q ss_pred cccccccccCeEEEEecCCCchhHHHHHHHHhcC---CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHH
Q 026924 19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKN---DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIE 95 (231)
Q Consensus 19 ~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G---~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~ 95 (231)
+...+..+++|++|||||++|||++++++|+++| ++ |++++|+.+..+.+.++... +.++.++.+|++++++++
T Consensus 12 ~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~--V~~~~r~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~ 88 (267)
T 1sny_A 12 SGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQH--LFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYD 88 (267)
T ss_dssp --------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSE--EEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHH
T ss_pred ccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcE--EEEEecChhhhHHHHHhhcc-CCceEEEEecCCChHHHH
Confidence 3445567889999999999999999999999999 75 99999998776655443332 568999999999999999
Q ss_pred HHHHHHHHHcC--CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC------CCCc
Q 026924 96 ASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------GTGI 167 (231)
Q Consensus 96 ~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~------~~~~ 167 (231)
++++++.+.++ ++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|.|.++ +. .
T Consensus 89 ~~~~~~~~~~g~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~-~ 161 (267)
T 1sny_A 89 KLVADIEGVTKDQGLNVLFNNAGIAP------KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQP-M 161 (267)
T ss_dssp HHHHHHHHHHGGGCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSC-S
T ss_pred HHHHHHHHhcCCCCccEEEECCCcCC------CccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccccccc-c
Confidence 99999999998 8999999999863 25667888999999999999999999999999999765 20 0
Q ss_pred ccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 168 ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 168 ~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
....++||++||..+..+..+.++...|+++|++++.|+++++.|++++||+ +|+|+||.|++
T Consensus 162 ~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 224 (267)
T 1sny_A 162 GVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIM-CVSLHPGWVKT 224 (267)
T ss_dssp STTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEECCCSBCS
T ss_pred cCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcE-EEEeCCcceec
Confidence 0001499999998887663323467789999999999999999999999999 66999999974
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=235.84 Aligned_cols=193 Identities=17% Similarity=0.236 Sum_probs=163.8
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+.+++++|++|||||++|||++++++|+++|++ |++++|+....+.+.+.+.. ..++.++.+|++|++++++++++
T Consensus 9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~ 85 (278)
T 2bgk_A 9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDT 85 (278)
T ss_dssp --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHH
Confidence 3445789999999999999999999999999997 88888876554444333322 23789999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.++++++|+||||||.... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +||++||.
T Consensus 86 ~~~~~~~id~li~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~ 154 (278)
T 2bgk_A 86 TIAKHGKLDIMFGNVGVLST-----TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG------SIVFTASI 154 (278)
T ss_dssp HHHHHSCCCEEEECCCCCCS-----SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE------EEEEECCG
T ss_pred HHHHcCCCCEEEECCcccCC-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC------eEEEEeec
Confidence 99999999999999997531 12456778889999999999999999999999999876654 99999998
Q ss_pred ccccCCCCCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+ +...|+++|++++.++++++.|++++||+ +|+|.||.+++
T Consensus 155 ~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 202 (278)
T 2bgk_A 155 SSFTA---GEGVSHVYTATKHAVLGLTTSLCTELGEYGIR-VNCVSPYIVAS 202 (278)
T ss_dssp GGTCC---CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCCSC
T ss_pred cccCC---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCcE-EEEEEeceecc
Confidence 87765 45 67789999999999999999999999999 66999999864
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=245.26 Aligned_cols=184 Identities=22% Similarity=0.262 Sum_probs=158.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh------cCCCceeEEEecCCChHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN------RFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~------~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++|++|||||++|||++++++|+++|++ |++++|+....+...+..+ ..+.++.++.+|+++++++++++++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~--v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 78 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER 78 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTC--CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCc--eEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHH
Confidence 4789999999999999999999999997 7777776655554433322 1245789999999999999999998
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+. ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||.
T Consensus 79 ~~--~g~iD~lVnnAG~~-------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g------~IV~isS~ 143 (327)
T 1jtv_A 79 VT--EGRVDVLVCNAGLG-------LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG------RVLVTGSV 143 (327)
T ss_dssp CT--TSCCSEEEECCCCC-------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEG
T ss_pred Hh--cCCCCEEEECCCcC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEECCc
Confidence 83 58999999999976 34567888999999999999999999999999999876654 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|++||+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 144 ~~~~~---~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~-v~~v~PG~v~T 190 (327)
T 1jtv_A 144 GGLMG---LPFNDVYCASKFALEGLCESLAVLLLPFGVH-LSLIECGPVHT 190 (327)
T ss_dssp GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred ccccC---CCCChHHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEEeCcccC
Confidence 88776 6778899999999999999999999999999 67999999975
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=234.78 Aligned_cols=185 Identities=23% Similarity=0.293 Sum_probs=162.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEE-eecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
||++|||||++|||++++++|+++|++ |++ .+|+.+..+.+.+.++..+.++.++++|++++++++++++++.++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCK--VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999999997 666 57876665555544444466899999999999999999999999999
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.+ +||++||..+..+
T Consensus 79 ~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~- 144 (244)
T 1edo_A 79 TIDVVVNNAGIT-------RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG------RIINIASVVGLIG- 144 (244)
T ss_dssp CCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC-
T ss_pred CCCEEEECCCCC-------CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC------EEEEECChhhcCC-
Confidence 999999999986 34567788899999999999999999999999999876554 9999999887766
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.++++++.|++++||+ +|+|.||.+++
T Consensus 145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 186 (244)
T 1edo_A 145 --NIGQANYAAAKAGVIGFSKTAAREGASRNIN-VNVVCPGFIAS 186 (244)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECSBCS
T ss_pred --CCCCccchhhHHHHHHHHHHHHHHhhhcCCE-EEEEeeCcccc
Confidence 5778899999999999999999999999999 67999999864
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-35 Score=245.29 Aligned_cols=186 Identities=20% Similarity=0.254 Sum_probs=156.2
Q ss_pred cCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeec---------CCCCccchhhhhhc---CCCceeEEEecCCCh-
Q 026924 27 KGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNR---FPERLDVLQLDLTVE- 91 (231)
Q Consensus 27 ~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r---------~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~- 91 (231)
++|++||||+++ |||+++|++|+++|++ |++.++ +.+..+........ ....+.++++|+++.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~--Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 78 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK--IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT 78 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSS
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCE--EEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence 478999999985 9999999999999997 775544 33333332222222 123578889999888
Q ss_pred -H------------------HHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHH
Q 026924 92 -S------------------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILV 152 (231)
Q Consensus 92 -~------------------~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 152 (231)
+ +++++++++.+++|++|+||||||+... ...++.+.+.++|++++++|+.+++.+
T Consensus 79 ~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l 153 (329)
T 3lt0_A 79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-----VQKDLLNTSRKGYLDALSKSSYSLISL 153 (329)
T ss_dssp GGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred hhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccccc-----CCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 7 9999999999999999999999997420 356788999999999999999999999
Q ss_pred HHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCcc-chhhhHHHHHHHHHHhhhhccc-cCCceeeeccCCCCC
Q 026924 153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH-SYRASKAALNHDKICVSGVWSK-EGSSYMYSVASRHCR 230 (231)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~pg~~~ 230 (231)
+++++|+|+++ | +||++||..+..+ .+++. .|++||+|+.+|+++++.|+++ +||+ +|+|+||.|+
T Consensus 154 ~~~~~p~m~~~--g------~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~-vn~v~PG~v~ 221 (329)
T 3lt0_A 154 CKYFVNIMKPQ--S------SIISLTYHASQKV---VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIR-INTISAGPLK 221 (329)
T ss_dssp HHHHGGGEEEE--E------EEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE-EEEEEECCCC
T ss_pred HHHHHHHHhhC--C------eEEEEeCccccCC---CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeE-EEEEecceee
Confidence 99999999875 3 9999999998877 67775 9999999999999999999999 9999 7799999998
Q ss_pred C
Q 026924 231 Y 231 (231)
Q Consensus 231 ~ 231 (231)
+
T Consensus 222 T 222 (329)
T 3lt0_A 222 S 222 (329)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=233.26 Aligned_cols=177 Identities=15% Similarity=0.107 Sum_probs=154.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||++|||+++|++|+++|++ |++++|+.+..+.+.+. .+.++.++.+|++++++++++++++.+. .
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~ 73 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA--TYLTGRSESKLSTVTNC---LSNNVGYRARDLASHQEVEQLFEQLDSI---P 73 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHHT---CSSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---HhhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence 58999999999999999999999997 89999987665554433 3568999999999999999999887543 3
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..+..+
T Consensus 74 d~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~--- 136 (230)
T 3guy_A 74 STVVHSAGSG-------YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-------VNVVMIMSTAAQQP--- 136 (230)
T ss_dssp SEEEECCCCC-------CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------CEEEEECCGGGTSC---
T ss_pred CEEEEeCCcC-------CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CeEEEEeecccCCC---
Confidence 9999999986 366788899999999999999999999999999998765 38999999988776
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 137 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 178 (230)
T 3guy_A 137 KAQESTYCAVKWAVKGLIESVRLELKGKPMK-IIAVYPGGMAT 178 (230)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCE-EEEEEECCC--
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhcCeE-EEEEECCcccC
Confidence 6888899999999999999999999999999 77999999874
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=235.80 Aligned_cols=192 Identities=20% Similarity=0.225 Sum_probs=164.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+...+ .++.++.+|++|+++++++++++.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999997 8889998766666554444333 578899999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++. ..++||++||..+
T Consensus 107 ~~~g~iD~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~----~~g~iv~isS~~~ 175 (279)
T 1xg5_A 107 SQHSGVDICINNAGLAR-------PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV----DDGHIININSMSG 175 (279)
T ss_dssp HHHCCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CSCEEEEECCGGG
T ss_pred HhCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CCceEEEEcChhh
Confidence 99999999999999763 456677888999999999999999999999999987653 0139999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
... .+.++...|+++|++++.|++.++.|++ +.||+ +|+|+||.+++
T Consensus 176 ~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~-v~~v~Pg~v~t 224 (279)
T 1xg5_A 176 HRV-LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIR-ATCISPGVVET 224 (279)
T ss_dssp TSC-CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEEEESCBCS
T ss_pred ccc-CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeE-EEEEecCcccc
Confidence 621 1256778899999999999999999998 89999 67999999874
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=233.26 Aligned_cols=186 Identities=20% Similarity=0.289 Sum_probs=161.3
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCce-eEEEecCCChHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERL-DVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.+ +.++ .++.+|++|+++++++++++
T Consensus 6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 6 VFRLDGACAAVTGAGSGIGLEICRAFAASGAR--LILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHH
Confidence 35678999999999999999999999999997 888999876555443333 3456 88999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+ ++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||..
T Consensus 81 ~~-~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~ 146 (254)
T 2wsb_A 81 EA-VAPVSILVNSAGIAR-------LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG------AIVNLGSMS 146 (254)
T ss_dssp HH-HSCCCEEEECCCCCC-------CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred Hh-hCCCcEEEECCccCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEecch
Confidence 88 899999999999763 4566778889999999999999999999999999876654 999999988
Q ss_pred cccCCCCCCCc--cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGW--HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++. ..|+++|++++.++++++.|++++||+ +|+|.||.+++
T Consensus 147 ~~~~---~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~-v~~v~Pg~v~t 194 (254)
T 2wsb_A 147 GTIV---NRPQFASSYMASKGAVHQLTRALAAEWAGRGVR-VNALAPGYVAT 194 (254)
T ss_dssp GTSC---CSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCS
T ss_pred hccC---CCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEEecccCc
Confidence 7765 4555 789999999999999999999999999 66999999864
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=238.92 Aligned_cols=191 Identities=13% Similarity=0.179 Sum_probs=166.2
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+..++++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.+... +.++.++++|+++++++++++++
T Consensus 20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (302)
T 1w6u_A 20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE 97 (302)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH
Confidence 345788999999999999999999999999997 888999876665544443322 56899999999999999999999
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhc-CCCCcccCceEEEEecc
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSA 179 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~~~~~~~~~iv~iss 179 (231)
+.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+ ++. ++||++||
T Consensus 98 ~~~~~g~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~iv~isS 164 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAGN-------FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG------AAFLSITT 164 (302)
T ss_dssp HHHHTCSCSEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------EEEEEECC
T ss_pred HHHHcCCCCEEEECCCCC-------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC------CEEEEEcc
Confidence 999999999999999976 3456778889999999999999999999999999973 333 49999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .++...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 165 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~-v~~v~Pg~v~t 212 (302)
T 1w6u_A 165 IYAETG---SGFVVPSASAKAGVEAMSKSLAAEWGKYGMR-FNVIQPGPIKT 212 (302)
T ss_dssp THHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred cccccC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCcE-EEEEeeccCCC
Confidence 887766 5778899999999999999999999999999 67999999863
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=232.05 Aligned_cols=178 Identities=18% Similarity=0.110 Sum_probs=153.7
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+..+..+|++|||||++|||+++|++|+++|++ |++++|+.+..+. ..+.+|++|+++++++++++
T Consensus 16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~------------~~~~~d~~d~~~v~~~~~~~ 81 (251)
T 3orf_A 16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWN--TISIDFRENPNAD------------HSFTIKDSGEEEIKSVIEKI 81 (251)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCTTSS------------EEEECSCSSHHHHHHHHHHH
T ss_pred ccccccCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCcccccc------------cceEEEeCCHHHHHHHHHHH
Confidence 334567899999999999999999999999997 9999998765332 24789999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++++++|+||||||... ....+.+.+.++|++.+++|+.+++.++++++|.|++. ++||++||..
T Consensus 82 ~~~~g~iD~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~ 147 (251)
T 3orf_A 82 NSKSIKVDTFVCAAGGWS------GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG--------GLFVLTGASA 147 (251)
T ss_dssp HTTTCCEEEEEECCCCCC------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGG
T ss_pred HHHcCCCCEEEECCccCC------CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC--------CEEEEEechh
Confidence 999999999999999864 23336778889999999999999999999999999763 3999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .++...|+++|+|++.++++++.|++ +.||+ +|+|+||.|++
T Consensus 148 ~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~-v~~v~PG~v~t 195 (251)
T 3orf_A 148 ALNR---TSGMIAYGATKAATHHIIKDLASENGGLPAGST-SLGILPVTLDT 195 (251)
T ss_dssp GGSC---CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCE-EEEEEESCBCC
T ss_pred hccC---CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcE-EEEEecCcCcC
Confidence 8876 68888999999999999999999987 99999 77999999874
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=251.33 Aligned_cols=189 Identities=22% Similarity=0.328 Sum_probs=165.0
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+...+++|++|||||++|||+++|++|+++|++ |++++|+... +.+.+..... .+.++.||++|++++++++++
T Consensus 206 ~~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~--Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~ 280 (454)
T 3u0b_A 206 DWDKPLDGKVAVVTGAARGIGATIAEVFARDGAT--VVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAH 280 (454)
T ss_dssp CTTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCchHHHHHHHHHHHHCCCE--EEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHH
Confidence 4445678999999999999999999999999997 8888886432 2233333222 356899999999999999999
Q ss_pred HHHHcCC-ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 101 IKEKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 101 ~~~~~g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
+.+++++ +|+||||||+. ....+.+.+.++|++.+++|+.+++++.+++.+.|.+++.+ +||++||
T Consensus 281 ~~~~~g~~id~lV~nAGv~-------~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g------~iV~iSS 347 (454)
T 3u0b_A 281 VTEHHGGKVDILVNNAGIT-------RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG------RVIGLSS 347 (454)
T ss_dssp HHHHSTTCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC------EEEEECC
T ss_pred HHHHcCCCceEEEECCccc-------CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------EEEEEeC
Confidence 9999976 99999999987 46788999999999999999999999999999999877665 9999999
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+..+ .+++..|+++|+++++|+++++.|++++||+ +|+|+||.|++
T Consensus 348 ~a~~~g---~~g~~~YaasKaal~~l~~~la~e~~~~gI~-vn~v~PG~v~T 395 (454)
T 3u0b_A 348 MAGIAG---NRGQTNYATTKAGMIGLAEALAPVLADKGIT-INAVAPGFIET 395 (454)
T ss_dssp HHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECSBCC
T ss_pred hHhCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEEcCcccC
Confidence 998888 6889999999999999999999999999999 77999999975
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=234.72 Aligned_cols=192 Identities=19% Similarity=0.231 Sum_probs=164.3
Q ss_pred cccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhhhhcCCCceeEEEecCCChHHHHHH
Q 026924 19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 19 ~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~ 97 (231)
+...++++++|++|||||+||||++++++|+++|++ |++.+| +.+..+.+.+.+...+.++.++.+|++|+++++++
T Consensus 12 ~~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 89 (274)
T 1ja9_A 12 PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGAS--VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL 89 (274)
T ss_dssp ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred CCCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 334456789999999999999999999999999997 888888 55555555555555567899999999999999999
Q ss_pred HHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEe
Q 026924 98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL 177 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~i 177 (231)
++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|++ + ++||++
T Consensus 90 ~~~~~~~~~~~d~vi~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-------~~iv~~ 154 (274)
T 1ja9_A 90 FDKAVSHFGGLDFVMSNSGME-------VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-------GRIILT 154 (274)
T ss_dssp HHHHHHHHSCEEEEECCCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-------EEEEEE
T ss_pred HHHHHHHcCCCCEEEECCCCC-------CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-------CEEEEE
Confidence 999999999999999999976 3456778899999999999999999999999999873 2 399999
Q ss_pred ccCccc-cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 178 SARVGS-IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 178 ss~~~~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
||..+. .+ .++...|+++|++++.+++.++.|++++||+ +|+++||.+++
T Consensus 155 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~-v~~v~Pg~v~t 205 (274)
T 1ja9_A 155 SSIAAVMTG---IPNHALYAGSKAAVEGFCRAFAVDCGAKGVT-VNCIAPGGVKT 205 (274)
T ss_dssp CCGGGTCCS---CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBSS
T ss_pred cChHhccCC---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCcccc
Confidence 998876 44 5777899999999999999999999999999 67999999864
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=230.72 Aligned_cols=174 Identities=12% Similarity=0.082 Sum_probs=154.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
++|++|||||++|||++++++|+++|++ |++++|+.+..+ ....++.+|++++++++++++++.+.+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999996 888999876533 135677899999999999999999999
Q ss_pred -CCccEEEEccccCCCCCCCCCCccc-chhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 106 -GSLNLLINASGILSIPNVLQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 106 -g~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|.|++. ++||++||..+.
T Consensus 70 ~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~~~ 134 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWA-------GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--------GLLQLTGAAAAM 134 (236)
T ss_dssp TCCEEEEEECCCCCC-------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGG
T ss_pred CCCCCEEEECCcccC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEECchhhc
Confidence 79999999999763 3455 677889999999999999999999999999652 399999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++++|+++++.|++ ++||+ +|+|+||.+++
T Consensus 135 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~-v~~v~Pg~v~t 180 (236)
T 1ooe_A 135 GP---TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA-VLTIMPVTLDT 180 (236)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCE-EEEEEESCBCC
T ss_pred cC---CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeE-EEEEecCcccC
Confidence 66 67888999999999999999999998 99999 77999999874
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=242.46 Aligned_cols=184 Identities=18% Similarity=0.246 Sum_probs=157.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec---------CCCCccchhhhhhcCCCceeEEEecCCChHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v 94 (231)
++++||++|||||++|||+++|++|+++|++ |++.++ +.+..+.+.+.+...+.. ..+|+++.+++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~--Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~ 79 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAG 79 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHH
Confidence 5688999999999999999999999999997 777654 343344444444333333 35899999999
Q ss_pred HHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEE
Q 026924 95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV 174 (231)
Q Consensus 95 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 174 (231)
+++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +|
T Consensus 80 ~~~~~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------rI 146 (319)
T 1gz6_A 80 EKLVKTALDTFGRIDVVVNNAGILR-------DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG------RI 146 (319)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EE
Confidence 9999999999999999999999863 4567788999999999999999999999999999877654 99
Q ss_pred EEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 175 ANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 175 v~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
|++||..+..+ .+++..|++||++++.|+++++.|++++||+ +|+|+||.+
T Consensus 147 V~vsS~~~~~~---~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~-vn~v~PG~~ 197 (319)
T 1gz6_A 147 IMTASASGIYG---NFGQANYSAAKLGLLGLANTLVIEGRKNNIH-CNTIAPNAG 197 (319)
T ss_dssp EEECCHHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEEECC
T ss_pred EEECChhhccC---CCCCHHHHHHHHHHHHHHHHHHHHhcccCEE-EEEEeCCCc
Confidence 99999888777 5778899999999999999999999999999 779999986
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=236.36 Aligned_cols=190 Identities=19% Similarity=0.170 Sum_probs=162.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.....+++|++|||||+||||++++++|+++|++ |++++|+.+..+.+.+.+...+ .++.++.+|++|+++++++++
T Consensus 21 ~~~~~~~~k~vlITGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 98 (286)
T 1xu9_A 21 FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA 98 (286)
T ss_dssp CCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred CChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence 3345688999999999999999999999999996 9999998877666554443334 378999999999999999999
Q ss_pred HHHHHcCCccEEEEc-cccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 100 SIKEKYGSLNLLINA-SGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 100 ~~~~~~g~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
++.+++|++|+|||| +|... ....+.+.++|++.+++|+.+++.++++++|.|.++. ++||++|
T Consensus 99 ~~~~~~g~iD~li~naag~~~--------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------g~iv~is 163 (286)
T 1xu9_A 99 QAGKLMGGLDMLILNHITNTS--------LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-------GSIVVVS 163 (286)
T ss_dssp HHHHHHTSCSEEEECCCCCCC--------CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEE
T ss_pred HHHHHcCCCCEEEECCccCCC--------CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-------CEEEEEC
Confidence 999999999999999 56542 2344568899999999999999999999999987543 3999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhc--cccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVW--SKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~--~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ .++...|++||+++++++++++.|+ .+.||+ +++|+||.+++
T Consensus 164 S~~~~~~---~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~-v~~v~Pg~v~t 214 (286)
T 1xu9_A 164 SLAGKVA---YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS-ITLCVLGLIDT 214 (286)
T ss_dssp EGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEEEEECCBCC
T ss_pred CcccccC---CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeE-EEEeecCccCC
Confidence 9988766 6788899999999999999999999 678999 66999999975
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=237.36 Aligned_cols=190 Identities=19% Similarity=0.230 Sum_probs=163.5
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-----CCCceeEEEecCCChHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-----FPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dls~~~~v~~ 96 (231)
+..++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+.. .+.++.++.+|+++++++++
T Consensus 12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~ 89 (303)
T 1yxm_A 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN 89 (303)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHH
Confidence 344688999999999999999999999999996 88899987666655444332 35689999999999999999
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.+.+++. ++||+
T Consensus 90 ~~~~~~~~~g~id~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~~iv~ 156 (303)
T 1yxm_A 90 LVKSTLDTFGKINFLVNNGGGQ-------FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG------GSIVN 156 (303)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC------EEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------CeEEE
Confidence 9999999999999999999975 3456778889999999999999999999999996544333 49999
Q ss_pred eccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 177 LSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 177 iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||.. ..+ .++...|+++|+++.+++++++.|++++||+ +|+|+||.+++
T Consensus 157 isS~~-~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 206 (303)
T 1yxm_A 157 IIVPT-KAG---FPLAVHSGAARAGVYNLTKSLALEWACSGIR-INCVAPGVIYS 206 (303)
T ss_dssp ECCCC-TTC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEECSBCC
T ss_pred EEeec-ccC---CCcchhhHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCCccc
Confidence 99987 444 6778899999999999999999999999999 67999999863
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=229.06 Aligned_cols=192 Identities=29% Similarity=0.393 Sum_probs=160.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||++|||++++++|+++| ++ |++++|+.+..+.+.+. .+.++.++.+|++++++++++++++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~--V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRH--IIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCE--EEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcE--EEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 57899999999999999999999999 85 99999987766554332 2568999999999999999999999999
Q ss_pred cC--CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC------CCCcccCceEEEE
Q 026924 105 YG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------GTGIERDVAVVAN 176 (231)
Q Consensus 105 ~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~------~~~~~~~~~~iv~ 176 (231)
++ ++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|.|.++ +. .....++||+
T Consensus 77 ~g~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~iv~ 149 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLL------SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQ-LSVSRAAVIT 149 (250)
T ss_dssp HGGGCCCEEEECCCCCC------CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSC-CCTTTCEEEE
T ss_pred cCCCCCcEEEECCcccC------CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCc-ccCCCcEEEE
Confidence 98 9999999999763 24566778889999999999999999999999999765 30 0001249999
Q ss_pred eccCccccCCCCC----CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 177 LSARVGSIGDNRL----GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 177 iss~~~~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||..+..+.... ++...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 150 isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 207 (250)
T 1yo6_A 150 ISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVL-VVNFCPGWVQT 207 (250)
T ss_dssp ECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCE-EEEEECCCC--
T ss_pred eccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeE-EEEEcCCceec
Confidence 9999877653211 567789999999999999999999999999 66999999874
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=230.59 Aligned_cols=185 Identities=25% Similarity=0.280 Sum_probs=162.0
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeE-EEecCCChHHHHHHHHHHHHHc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDV-LQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|++|||||+||||++++++|+++|++ |++. +|+.+..+.+.+.+...+.++.. +.+|++++++++++++++.+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFA--LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999997 7666 78766665555554444567777 9999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||..+..+
T Consensus 79 ~~~d~li~~Ag~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~ 145 (245)
T 2ph3_A 79 GGLDTLVNNAGIT-------RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFG------RIVNITSVVGILG 145 (245)
T ss_dssp TCCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC
T ss_pred CCCCEEEECCCCC-------CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC------EEEEEeChhhccC
Confidence 9999999999976 34567788999999999999999999999999999876554 9999999887766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|++++.++++++.|+.++||+ +|+|.||.+++
T Consensus 146 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 187 (245)
T 2ph3_A 146 ---NPGQANYVASKAGLIGFTRAVAKEYAQRGIT-VNAVAPGFIET 187 (245)
T ss_dssp ---CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHHHcCeE-EEEEEEEeecC
Confidence 5778899999999999999999999999999 67999999864
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=233.03 Aligned_cols=177 Identities=12% Similarity=0.114 Sum_probs=154.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+ +...+.++..+ |+++++++++++.++++++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence 68999999999999999999999997 9999998777665544 33334455443 7788999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..+..+
T Consensus 74 D~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~--- 138 (254)
T 1zmt_A 74 DVLVSNDIFAP------EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG------HIIFITSATPFGP--- 138 (254)
T ss_dssp CEEEEECCCCC------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCSTTTSC---
T ss_pred CEEEECCCcCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECCcccccC---
Confidence 99999999762 24567888999999999999999999999999999876655 9999999988776
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+++..|++||+++++|+++++.|++++||+ +|+|+||.|
T Consensus 139 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v 178 (254)
T 1zmt_A 139 WKELSTYTSARAGACTLANALSKELGEYNIP-VFAIGPNYL 178 (254)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCC-EEEEEESSB
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcCcE-EEEEecCcc
Confidence 6788899999999999999999999999999 779999998
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=230.79 Aligned_cols=183 Identities=22% Similarity=0.272 Sum_probs=153.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCCh-HHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVE-STIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~-~~v~~~~~~~~ 102 (231)
++++|++|||||++|||++++++|+++|++ .|++++|+... +.+.++.+.. +.++.++.+|++|+ ++++++++++.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~-~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLK-NFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCS-EEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCc-EEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence 578999999999999999999999999996 47888887642 2222222222 45789999999998 99999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++++++|+||||||.. +.++|++.+++|+.+++.++++++|.|.+++.+ ..++||++||..+
T Consensus 80 ~~~g~id~lv~~Ag~~---------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---~~g~iv~isS~~~ 141 (254)
T 1sby_A 80 DQLKTVDILINGAGIL---------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG---PGGIIANICSVTG 141 (254)
T ss_dssp HHHSCCCEEEECCCCC---------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGG
T ss_pred HhcCCCCEEEECCccC---------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCC---CCCEEEEECchhh
Confidence 9999999999999963 235788999999999999999999999765310 0149999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|++||+++++|+++++.|+.++||+ +|+|+||.|++
T Consensus 142 ~~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~-v~~v~Pg~v~t 186 (254)
T 1sby_A 142 FNA---IHQVPVYSASKAAVVSFTNSLAKLAPITGVT-AYSINPGITRT 186 (254)
T ss_dssp TSC---CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEE-EEEEEECSEES
T ss_pred ccC---CCCchHHHHHHHHHHHHHHHHHHHhccCCeE-EEEEecCCccC
Confidence 766 6778899999999999999999999999999 67999999874
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=233.84 Aligned_cols=176 Identities=15% Similarity=0.144 Sum_probs=151.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-e--cCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-C--RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|++|||||++|||++++++|+++|++ |+++ + |+.+..+.+.+.+ .+ +|+.|+++++++++++.++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~ 69 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT--VVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQH 69 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHH
Confidence 589999999999999999999999997 8888 6 8865555443332 12 2444888899999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCC---cccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 105 YGSLNLLINASGILSIPNVLQPE---TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++++|+||||||... . .++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++||..
T Consensus 70 ~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~ 136 (244)
T 1zmo_A 70 GEAIDTIVSNDYIPR-------PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGA------SVIFITSSV 136 (244)
T ss_dssp SSCEEEEEECCCCCT-------TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred cCCCCEEEECCCcCC-------CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECChh
Confidence 999999999999863 3 567888999999999999999999999999999887654 999999998
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|++||+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 137 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~T 182 (244)
T 1zmo_A 137 GKKP---LAYNPLYGPARAATVALVESAAKTLSRDGIL-LYAIGPNFFNN 182 (244)
T ss_dssp GTSC---CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBCB
T ss_pred hCCC---CCCchHHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEeeCCCcC
Confidence 8766 6788899999999999999999999999999 77999999874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=236.94 Aligned_cols=179 Identities=19% Similarity=0.250 Sum_probs=153.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++||++|||||++|||++++++|+++|++ |++++|+.+..+.+.+. .+.++.++.+|++|+++++++++++
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~-- 84 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGAT--VIMAVRDTRKGEAAART---MAGQVEVRELDLQDLSSVRRFADGV-- 84 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHTT---SSSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---hcCCeeEEEcCCCCHHHHHHHHHhc--
Confidence 4678999999999999999999999999996 99999987665554333 3568999999999999999888876
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||||+.. +..+.+.++|++.+++|+.+++.++++++|.|.+ +||++||..+.
T Consensus 85 --~~iD~lv~nAg~~~---------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------riv~isS~~~~ 143 (291)
T 3rd5_A 85 --SGADVLINNAGIMA---------VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----------RVVTVSSMAHW 143 (291)
T ss_dssp --CCEEEEEECCCCCS---------CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----------EEEEECCGGGT
T ss_pred --CCCCEEEECCcCCC---------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------heeEeechhhc
Confidence 79999999999763 2245678899999999999999999999999975 89999998876
Q ss_pred cCC----------CCCCCccchhhhHHHHHHHHHHhhhhccccC--CceeeeccCCCCCC
Q 026924 184 IGD----------NRLGGWHSYRASKAALNHDKICVSGVWSKEG--SSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~----------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~g--i~~~~~v~pg~~~~ 231 (231)
.+. .+.+++..|++||+|++.|+++++.|++++| |+ +|+|+||.|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~-v~~v~PG~v~T 202 (291)
T 3rd5_A 144 PGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLR-ALAAHPGYSHT 202 (291)
T ss_dssp TCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEECCSGGGS
T ss_pred cCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEE-EEEeeCCCCcc
Confidence 542 1234567899999999999999999999988 88 67999999875
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=231.83 Aligned_cols=182 Identities=20% Similarity=0.278 Sum_probs=154.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.+... +.++.++.+|++|+++++++++++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999997 888899876555443333221 34788999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||... .++|++.+++|+.+++.+++.++|.|++++.+ ..++||++||..+.
T Consensus 83 ~~g~id~lv~~Ag~~~---------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~ 144 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNN---------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG---EGGIIINMSSLAGL 144 (267)
T ss_dssp HHSCCCEEEECCCCCC---------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGGT
T ss_pred HcCCCCEEEECCCCCC---------------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC---CCCEEEEeCCcccc
Confidence 9999999999999641 35688999999999999999999999765310 01499999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHh--hhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICV--SGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l--~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++++++++ +.|+++.||+ +|+|+||.+++
T Consensus 145 ~~---~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~-v~~v~Pg~v~t 190 (267)
T 2gdz_A 145 MP---VAQQPVYCASKHGIVGFTRSAALAANLMNSGVR-LNAICPGFVNT 190 (267)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEE-EEEEEESCBSS
T ss_pred CC---CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcE-EEEEecCcCcc
Confidence 66 677889999999999999995 6899999999 77999999874
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=259.81 Aligned_cols=190 Identities=21% Similarity=0.265 Sum_probs=149.6
Q ss_pred ccccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec---------CCCCccchhhhhhcCCCceeEEEecC
Q 026924 18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 18 ~~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
++....++++||++|||||++|||+++|++|+++|++ |++++| +.+..+.+.+.+...+..+ .+|+
T Consensus 9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~--Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~ 83 (613)
T 3oml_A 9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAK--VVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADY 83 (613)
T ss_dssp ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEC--------------CHHHHHHHHHHTTCCE---EECC
T ss_pred cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEe
Confidence 3445567899999999999999999999999999997 888887 5555555555554444443 4899
Q ss_pred CChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcc
Q 026924 89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIE 168 (231)
Q Consensus 89 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~ 168 (231)
++.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++++.|
T Consensus 84 ~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g-- 154 (613)
T 3oml_A 84 NSVIDGAKVIETAIKAFGRVDILVNNAGILR-------DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG-- 154 (613)
T ss_dssp CCGGGHHHHHC----------CEECCCCCCC-------CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE--
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence 9999999999999999999999999999873 5677889999999999999999999999999999988765
Q ss_pred cCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 169 ~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+||++||..+..+ .+++..|++||+|+.+|+++++.|++++||+ +|+|+||.+
T Consensus 155 ----~IV~isS~a~~~~---~~~~~~Y~asKaal~~lt~~la~e~~~~gI~-vn~v~Pg~~ 207 (613)
T 3oml_A 155 ----RIIMTSSNSGIYG---NFGQVNYTAAKMGLIGLANTVAIEGARNNVL-CNVIVPTAA 207 (613)
T ss_dssp ----EEEEECCHHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEEC--
T ss_pred ----EEEEECCHHHcCC---CCCChHHHHHHHHHHHHHHHHHHHhCccCeE-EEEEECCCC
Confidence 9999999998887 6888899999999999999999999999999 779999975
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=227.79 Aligned_cols=181 Identities=20% Similarity=0.227 Sum_probs=154.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||++++++|+++|++ |++++|+.+..+.+.+.. ..+.++.+|++|+++++++++
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~---- 72 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG---- 72 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc----CCCCEEEEeCCCHHHHHHHHH----
Confidence 5678999999999999999999999999997 888899865544433322 245667999999999988776
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCcc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~ 182 (231)
.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ . ++||++||..+
T Consensus 73 ~~~~id~vi~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~------~~iv~~sS~~~ 139 (244)
T 3d3w_A 73 SVGPVDLLVNNAAVA-------LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP------GAIVNVSSQCS 139 (244)
T ss_dssp TCCCCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEEECCGGG
T ss_pred HcCCCCEEEECCccC-------CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------cEEEEeCchhh
Confidence 568999999999976 345677888999999999999999999999999998754 3 49999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|++||++++.++++++.|++++||+ +|+|+||.+++
T Consensus 140 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~Pg~v~t 184 (244)
T 3d3w_A 140 QRA---VTNHSVYCSTKGALDMLTKVMALELGPHKIR-VNAVNPTVVMT 184 (244)
T ss_dssp TSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBTT
T ss_pred ccC---CCCCchHHHHHHHHHHHHHHHHHHhcccCeE-EEEEEeccccc
Confidence 765 5778899999999999999999999999999 67999999863
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=225.77 Aligned_cols=162 Identities=22% Similarity=0.281 Sum_probs=143.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|++|||||++|||+++|++|+++|++ |++.+|+.+ +|++|+++++++++++
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~--------------------~D~~~~~~v~~~~~~~-- 57 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTI--VHVASRQTG--------------------LDISDEKSVYHYFETI-- 57 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEE--EEEESGGGT--------------------CCTTCHHHHHHHHHHH--
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEecCCcc--------------------cCCCCHHHHHHHHHHh--
Confidence 3578999999999999999999999999996 888888653 8999999999888764
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||||... +..++.+.+.++|++.+++|+.+++.++++++|.|+++ ++||++||..+.
T Consensus 58 --g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~~sS~~~~ 121 (223)
T 3uce_A 58 --GAFDHLIVTAGSYA------PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--------GSITLTSGMLSR 121 (223)
T ss_dssp --CSEEEEEECCCCCC------CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--------EEEEEECCGGGT
T ss_pred --CCCCEEEECCCCCC------CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--------eEEEEecchhhc
Confidence 89999999999864 45678889999999999999999999999999999763 399999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|+++++|+++++.|+++ |+ +|+|+||.+++
T Consensus 122 ~~---~~~~~~Y~asK~a~~~~~~~la~e~~~--i~-vn~v~PG~v~t 163 (223)
T 3uce_A 122 KV---VANTYVKAAINAAIEATTKVLAKELAP--IR-VNAISPGLTKT 163 (223)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHTT--SE-EEEEEECSBCS
T ss_pred cC---CCCchHHHHHHHHHHHHHHHHHHhhcC--cE-EEEEEeCCCcc
Confidence 76 688889999999999999999999987 99 77999999874
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=229.54 Aligned_cols=189 Identities=15% Similarity=0.240 Sum_probs=150.1
Q ss_pred cccccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecC-----------CCCccchhhhhhcCC--CceeEEEec
Q 026924 23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRN-----------PNGATGLLDLKNRFP--ERLDVLQLD 87 (231)
Q Consensus 23 ~~~~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~-----------~~~~~~~~~~~~~~~--~~v~~~~~D 87 (231)
.+++++|++|||||+ +|||+++|++|+++|++ |++++|+ .+..+.+.++ .... .....+.+|
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE--ILVGTWVPALNIFETSLRRGKFDQSRVL-PDGSLMEIKKVYPLD 79 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHTTTTTGGGBC-TTSSBCCEEEEEEEC
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCe--EEEeeccccchhhhhhhhhhHhhhhhhh-ccccccccccccccc
Confidence 456889999999999 99999999999999997 7777753 2222222111 1100 112333333
Q ss_pred --------CC----C--------hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhh
Q 026924 88 --------LT----V--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147 (231)
Q Consensus 88 --------ls----~--------~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 147 (231)
++ | +++++++++++.+++|++|+||||||.... ...++.+.+.++|++.+++|+.
T Consensus 80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~ 154 (297)
T 1d7o_A 80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-----VSKPLLETSRKGYLAAISASSY 154 (297)
T ss_dssp TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTH
T ss_pred eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCcc-----CCCCcccCCHHHHHHHHHHhhh
Confidence 32 2 678999999999999999999999996420 2456788899999999999999
Q ss_pred HHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCc-cchhhhHHHHHHHHHHhhhhccc-cCCceeeecc
Q 026924 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNHDKICVSGVWSK-EGSSYMYSVA 225 (231)
Q Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~ 225 (231)
+++.++++++|.|++. ++||++||..+..+ .+++ ..|++||+|+++|+++++.|+++ +||+ +|+|+
T Consensus 155 g~~~l~~~~~~~m~~~--------g~iv~isS~~~~~~---~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~-vn~v~ 222 (297)
T 1d7o_A 155 SFVSLLSHFLPIMNPG--------GASISLTYIASERI---IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIR-VNTIS 222 (297)
T ss_dssp HHHHHHHHHGGGEEEE--------EEEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE-EEEEE
T ss_pred HHHHHHHHHHHHhccC--------ceEEEEeccccccC---CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcE-EEEEe
Confidence 9999999999999753 39999999988766 5666 68999999999999999999996 8999 77999
Q ss_pred CCCCCC
Q 026924 226 SRHCRY 231 (231)
Q Consensus 226 pg~~~~ 231 (231)
||.|++
T Consensus 223 PG~v~T 228 (297)
T 1d7o_A 223 AGPLGS 228 (297)
T ss_dssp ECCCBC
T ss_pred cccccc
Confidence 999874
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=233.93 Aligned_cols=189 Identities=19% Similarity=0.246 Sum_probs=150.5
Q ss_pred ccccccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCC-----------CCccchhhhhhcCCC---ceeEEE
Q 026924 22 ASVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATGLLDLKNRFPE---RLDVLQ 85 (231)
Q Consensus 22 ~~~~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~-----------~~~~~~~~~~~~~~~---~v~~~~ 85 (231)
+.++++||++||||| ++|||+++|++|+++|++ |++++|++ ...+.+.+ +.. +. .+.++.
T Consensus 3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 78 (315)
T 2o2s_A 3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGAR--VALGTWPPVLGLFQKSLQSGRLDEDRK-LPD-GSLIEFAGVYP 78 (315)
T ss_dssp -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCE--EEEEECHHHHHHHHHHHHHTTTHHHHB-CTT-SCBCCCSCEEE
T ss_pred CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCE--EEEEecccccchhhhhhhhhhhhhhhh-hhc-ccccccccccc
Confidence 345688999999999 899999999999999997 88887642 11222211 111 11 123444
Q ss_pred ec------------CCC--------hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhh
Q 026924 86 LD------------LTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145 (231)
Q Consensus 86 ~D------------ls~--------~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 145 (231)
+| +++ +++++++++++.+++|++|+||||||.... ...++.+.+.++|++.+++|
T Consensus 79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-----~~~~~~~~~~~~~~~~~~~N 153 (315)
T 2o2s_A 79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPE-----VTKPLLETSRKGYLAASSNS 153 (315)
T ss_dssp CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCc-----CCCCcccCCHHHHHHHHhhh
Confidence 43 343 668999999999999999999999996520 13567788999999999999
Q ss_pred hhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCc-cchhhhHHHHHHHHHHhhhhccc-cCCceeee
Q 026924 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNHDKICVSGVWSK-EGSSYMYS 223 (231)
Q Consensus 146 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~ 223 (231)
+.+++.++++++|.|+++ ++||++||..+..+ .+++ ..|++||+|+++|+++++.|+++ +||+ +|+
T Consensus 154 ~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~l~~~la~el~~~~gIr-vn~ 221 (315)
T 2o2s_A 154 AYSFVSLLQHFGPIMNEG--------GSAVTLSYLAAERV---VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVR-VNA 221 (315)
T ss_dssp THHHHHHHHHHSTTEEEE--------EEEEEEEEGGGTSC---CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCE-EEE
T ss_pred hHHHHHHHHHHHHHHhcC--------CEEEEEeccccccc---CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeE-EEE
Confidence 999999999999999753 39999999988766 5666 58999999999999999999985 9999 779
Q ss_pred ccCCCCCC
Q 026924 224 VASRHCRY 231 (231)
Q Consensus 224 v~pg~~~~ 231 (231)
|+||.|++
T Consensus 222 v~PG~v~T 229 (315)
T 2o2s_A 222 ISAGPLKS 229 (315)
T ss_dssp EEECCCCC
T ss_pred Eecccccc
Confidence 99999975
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=233.11 Aligned_cols=181 Identities=22% Similarity=0.299 Sum_probs=135.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++++|++|||||++|||+++|++|++ |++ |++++|+.+..+.+.+ ..++.++.+|++++++ .+.+.+..+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~--v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~ 71 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHI--VYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLK 71 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSE--EEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCe--EEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHH
Confidence 357899999999999999999999998 885 8888997655544332 2468899999998876 444455556
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ | +||++||..+.
T Consensus 72 ~~~~id~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g------~iv~isS~~~~ 137 (245)
T 3e9n_A 72 NLDHVDTLVHAAAVA-------RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G------CVIYINSGAGN 137 (245)
T ss_dssp TCSCCSEEEECC-----------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEC-----
T ss_pred hcCCCCEEEECCCcC-------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------eEEEEcCcccc
Confidence 789999999999987 356677889999999999999999999999999997754 3 99999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|++||+|+++|+++++.|++++||+ +|+|+||.+++
T Consensus 138 ~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 181 (245)
T 3e9n_A 138 GP---HPGNTIYAASKHALRGLADAFRKEEANNGIR-VSTVSPGPTNT 181 (245)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCC--
T ss_pred cC---CCCchHHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCCccC
Confidence 76 6788899999999999999999999999999 67999999874
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=235.41 Aligned_cols=191 Identities=18% Similarity=0.244 Sum_probs=133.7
Q ss_pred ccccccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCC-----------CCccc-----------hhhhhhcC
Q 026924 22 ASVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATG-----------LLDLKNRF 77 (231)
Q Consensus 22 ~~~~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~-----------~~~~~-----------~~~~~~~~ 77 (231)
+.+++++|++||||| ++|||+++|++|+++|++ |++++|++ +..+. +.+.+...
T Consensus 3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
T 2ptg_A 3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGAR--VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK 80 (319)
T ss_dssp CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCE--EEEEECHHHHHHHHC----------------------------
T ss_pred cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE--EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc
Confidence 345688999999999 899999999999999997 87777531 11111 11111111
Q ss_pred CC---ceeEEEec------------CCC--------hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhc
Q 026924 78 PE---RLDVLQLD------------LTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134 (231)
Q Consensus 78 ~~---~v~~~~~D------------ls~--------~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~ 134 (231)
+. ...++.+| +++ +++++++++++.+++|++|+||||||.... ...++.+.+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-----~~~~~~~~~ 155 (319)
T 2ptg_A 81 PVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPE-----VTKPLLQTS 155 (319)
T ss_dssp ----CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSS-----SSSCGGGCC
T ss_pred cccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-----CCCccccCC
Confidence 11 12344433 333 458999999999999999999999996520 145678889
Q ss_pred hHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCc-cchhhhHHHHHHHHHHhhhhc
Q 026924 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 135 ~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.++|++.+++|+.+++.++++++|+|+++ ++||++||..+..+ .+++ ..|++||+|+++|+++++.|+
T Consensus 156 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~l~~~la~el 224 (319)
T 2ptg_A 156 RKGYLAAVSSSSYSFVSLLQHFLPLMKEG--------GSALALSYIASEKV---IPGYGGGMSSAKAALESDCRTLAFEA 224 (319)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEEECC---------------------THHHHHHHHHHH
T ss_pred HHHHHHHHhHhhHHHHHHHHHHHHHHhcC--------ceEEEEeccccccc---cCccchhhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999753 39999999988766 5666 689999999999999999999
Q ss_pred cc-cCCceeeeccCCCCCC
Q 026924 214 SK-EGSSYMYSVASRHCRY 231 (231)
Q Consensus 214 ~~-~gi~~~~~v~pg~~~~ 231 (231)
++ +||+ +|+|+||.|++
T Consensus 225 ~~~~gIr-vn~v~PG~v~T 242 (319)
T 2ptg_A 225 GRARAVR-VNCISAGPLKS 242 (319)
T ss_dssp HHHHCCE-EEEEEECCCC-
T ss_pred ccccCee-EEEEeeCCccC
Confidence 96 8999 77999999975
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=223.33 Aligned_cols=181 Identities=20% Similarity=0.244 Sum_probs=154.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.+.. .++.++.+|++++++++++++
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~---- 72 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG---- 72 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----
Confidence 4578999999999999999999999999997 888899865544433221 245667999999999988876
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCcc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~ 182 (231)
.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++ . ++||++||..+
T Consensus 73 ~~~~id~vi~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~~iv~~sS~~~ 139 (244)
T 1cyd_A 73 GIGPVDLLVNNAALV-------IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP------GSIVNVSSMVA 139 (244)
T ss_dssp TCCCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEEECCGGG
T ss_pred HcCCCCEEEECCccc-------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC------eEEEEEcchhh
Confidence 568999999999976 345677888999999999999999999999999998754 3 49999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|++++.++++++.|++++||+ +|+++||.+++
T Consensus 140 ~~~---~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~-v~~v~pg~v~t 184 (244)
T 1cyd_A 140 HVT---FPNLITYSSTKGAMTMLTKAMAMELGPHKIR-VNSVNPTVVLT 184 (244)
T ss_dssp TSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBTT
T ss_pred cCC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCeE-EEEEecCcccC
Confidence 765 5778899999999999999999999999999 67999999863
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=235.90 Aligned_cols=194 Identities=11% Similarity=0.050 Sum_probs=157.9
Q ss_pred ccCeEEEEecCCCchhHH--HHHHHHhcCCccEEEEeecCCCCc------------cchhhhhhcCCCceeEEEecCCCh
Q 026924 26 WKGGVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRNPNGA------------TGLLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~a--ia~~l~~~G~~~~vi~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
..||++|||||++|||++ +++.|++.|++ |++++|+.... +.+.+..+..+.++..+.+|++++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH--TIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE--EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE--EEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence 579999999999999999 99999999997 88888876543 223444455677899999999999
Q ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCC--CC-------CCCCC------------------cccchhchHHHhhhhhh
Q 026924 92 STIEASAKSIKEKYGSLNLLINASGILSI--PN-------VLQPE------------------TTLNKVEKSSLMLAYEV 144 (231)
Q Consensus 92 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~--~~-------~~~~~------------------~~~~~~~~~~~~~~~~~ 144 (231)
++++++++++.+++|+||+||||||.... |. ...+. ..+.+.+.++|++.+++
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v 215 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV 215 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 99999999999999999999999997410 00 00011 02246789999999999
Q ss_pred hhhHHH-HHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCc--cchhhhHHHHHHHHHHhhhhccc-cCCce
Q 026924 145 NAVGPI-LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNHDKICVSGVWSK-EGSSY 220 (231)
Q Consensus 145 n~~~~~-~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~-~gi~~ 220 (231)
|..+.+ .+++++.+.+...+. ++||++||..+..+ .|.+ ..|++||+|+++|+++++.|+++ +|||
T Consensus 216 n~~~~~~~~~~~l~~~~~~~~g------g~IV~iSSi~~~~~---~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIr- 285 (418)
T 4eue_A 216 MGGEDWQEWCEELLYEDCFSDK------ATTIAYSYIGSPRT---YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGR- 285 (418)
T ss_dssp HSSHHHHHHHHHHHHTTCEEEE------EEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCE-
T ss_pred hhHHHHHHHHHHHHHHhhhcCC------cEEEEEeCchhcCC---CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeE-
Confidence 999988 777777764433333 49999999988776 5777 89999999999999999999999 9999
Q ss_pred eeeccCCCCCC
Q 026924 221 MYSVASRHCRY 231 (231)
Q Consensus 221 ~~~v~pg~~~~ 231 (231)
+|+|+||.|++
T Consensus 286 VN~V~PG~v~T 296 (418)
T 4eue_A 286 AFVSVNKALVT 296 (418)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEECCcCcC
Confidence 88999999985
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=224.90 Aligned_cols=177 Identities=18% Similarity=0.162 Sum_probs=148.9
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+...+++|++|||||++|||++++++|+++|++ |++++|+.+. +.+ .+ ++.++ +|+ .+++++++++
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~---~~~----~~-~~~~~-~D~--~~~~~~~~~~ 78 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNEEL---LKR----SG-HRYVV-CDL--RKDLDLLFEK 78 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHH---HHH----TC-SEEEE-CCT--TTCHHHHHHH
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHH---HHh----hC-CeEEE-eeH--HHHHHHHHHH
Confidence 3445788999999999999999999999999997 8888997621 111 12 56677 999 5567777766
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+ .++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||.
T Consensus 79 ~----~~iD~lv~~Ag~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~ 141 (249)
T 1o5i_A 79 V----KEVDILVLNAGGP-------KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG------RIVAITSF 141 (249)
T ss_dssp S----CCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred h----cCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcch
Confidence 5 3899999999976 35667888999999999999999999999999999877654 99999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .++...|+++|+++++|+++++.|++++||+ +|+|+||.+++
T Consensus 142 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~Pg~v~t 188 (249)
T 1o5i_A 142 SVISP---IENLYTSNSARMALTGFLKTLSFEVAPYGIT-VNCVAPGWTET 188 (249)
T ss_dssp GGTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred HhcCC---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeE-EEEEeeCCCcc
Confidence 88766 6778899999999999999999999999999 77999999874
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.3e-32 Score=221.88 Aligned_cols=187 Identities=20% Similarity=0.200 Sum_probs=154.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++|++|||||++|||++++++|++ .|++ |++++|+.+..+.+.+.+...+.++.++.+|+++.++++++++++.+++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGD--VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSE--EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCe--EEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 579999999999999999999999 9996 8889998766666555555446789999999999999999999999999
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+||||||... .........++|++.+++|+.+++.+++.++|.|++. ++||++||..+..+
T Consensus 81 g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~~sS~~~~~~ 145 (276)
T 1wma_A 81 GGLDVLVNNAGIAF-------KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--------GRVVNVSSIMSVRA 145 (276)
T ss_dssp SSEEEEEECCCCCC-------CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHHHHH
T ss_pred CCCCEEEECCcccc-------cCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--------CEEEEECChhhhcc
Confidence 99999999999763 1122222247899999999999999999999998753 39999999876532
Q ss_pred CC--------------------------------------CCCCccchhhhHHHHHHHHHHhhhhccc----cCCceeee
Q 026924 186 DN--------------------------------------RLGGWHSYRASKAALNHDKICVSGVWSK----EGSSYMYS 223 (231)
Q Consensus 186 ~~--------------------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~----~gi~~~~~ 223 (231)
.. +......|++||++++.|++.++.++++ .||+ +|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~-v~~ 224 (276)
T 1wma_A 146 LKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKIL-LNA 224 (276)
T ss_dssp HHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCE-EEE
T ss_pred cccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceE-EEE
Confidence 00 0011268999999999999999999998 7999 679
Q ss_pred ccCCCCCC
Q 026924 224 VASRHCRY 231 (231)
Q Consensus 224 v~pg~~~~ 231 (231)
|+||.|++
T Consensus 225 v~PG~v~t 232 (276)
T 1wma_A 225 CCPGWVRT 232 (276)
T ss_dssp EECCSBCS
T ss_pred ecCCcccc
Confidence 99999874
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-31 Score=214.71 Aligned_cols=178 Identities=20% Similarity=0.188 Sum_probs=150.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||++++++|+++|++ |++++|+.+ . .++.++.+|++++++++++++++ +++++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~ 66 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR--VVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAP 66 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence 689999999999999999999999997 888888765 2 23478999999999999999999 88899
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhc----hHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVE----KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+|++|||||... ...+.+.+ .++|++.+++|+.+++.+++++.+.|.+++....+..++||++||..+.
T Consensus 67 ~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 139 (242)
T 1uay_A 67 LFAVVSAAGVGL-------AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF 139 (242)
T ss_dssp EEEEEECCCCCC-------CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred ceEEEEcccccC-------cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence 999999999763 23333333 4489999999999999999999999987541111122499999999877
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++...|+++|++++.++++++.|++++||+ +|+|+||.+++
T Consensus 140 ~~---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~-v~~v~Pg~v~t 183 (242)
T 1uay_A 140 EG---QIGQAAYAASKGGVVALTLPAARELAGWGIR-VVTVAPGLFDT 183 (242)
T ss_dssp HC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSCSS
T ss_pred cC---CCCCchhhHHHHHHHHHHHHHHHHHhhcCcE-EEEEEeccCcc
Confidence 66 5778899999999999999999999999999 66999999864
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=236.24 Aligned_cols=182 Identities=19% Similarity=0.211 Sum_probs=156.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCC-------------CCccchhhhhhcCCCceeEEEecCCChH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNP-------------NGATGLLDLKNRFPERLDVLQLDLTVES 92 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~-------------~~~~~~~~~~~~~~~~v~~~~~Dls~~~ 92 (231)
++|++|||||++|||+++|++|+++|++ +|+++ +|+. +..+.+.+.++..+.++.++.||++|++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 5899999999999999999999999998 67887 8884 3344455555556789999999999999
Q ss_pred HHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCc
Q 026924 93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDV 171 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~ 171 (231)
+++++++++. ++++||+||||||+. ....+.+.+.++|++++++|+.+++++.+.+.+.+++++ .+
T Consensus 329 ~v~~~~~~i~-~~g~id~vVh~AGv~-------~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~----- 395 (525)
T 3qp9_A 329 AAARLLAGVS-DAHPLSAVLHLPPTV-------DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP----- 395 (525)
T ss_dssp HHHHHHHTSC-TTSCEEEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC-----
T ss_pred HHHHHHHHHH-hcCCCcEEEECCcCC-------CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC-----
Confidence 9999999998 789999999999987 467888999999999999999999999999999997764 33
Q ss_pred eEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 172 ~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||++||..+..+ .+++..|+++|+++++|+ .++++.|++ +|+|+||.+++
T Consensus 396 -~iV~~SS~a~~~g---~~g~~~YaaaKa~l~~lA----~~~~~~gi~-v~sI~pG~~~t 446 (525)
T 3qp9_A 396 -VLVLFSSVAAIWG---GAGQGAYAAGTAFLDALA----GQHRADGPT-VTSVAWSPWEG 446 (525)
T ss_dssp -EEEEEEEGGGTTC---CTTCHHHHHHHHHHHHHH----TSCCSSCCE-EEEEEECCBTT
T ss_pred -EEEEECCHHHcCC---CCCCHHHHHHHHHHHHHH----HHHHhCCCC-EEEEECCcccc
Confidence 9999999999988 788999999999999885 567778999 66999999863
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=210.32 Aligned_cols=164 Identities=18% Similarity=0.213 Sum_probs=135.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||++|||++++++|+++|++ |++++|+++..+. . +.+|++++++++++++++ .+++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~---~~~i 63 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKC---SKGM 63 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHh---CCCC
Confidence 58999999999999999999999997 8888998765432 1 568999999998887743 3899
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC--
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-- 186 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-- 186 (231)
|+||||||... +. +.|++.+++|+.+++.++++++|.|.+++.+ +||++||..+....
T Consensus 64 d~lv~~Ag~~~------~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~~~~~ 123 (257)
T 1fjh_A 64 DGLVLCAGLGP------QT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQP------AAVVISSVASAHLAFD 123 (257)
T ss_dssp SEEEECCCCCT------TC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSSCGG
T ss_pred CEEEECCCCCC------Cc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCc------EEEEECChhhhccccc
Confidence 99999999752 01 2388999999999999999999999887655 99999998876210
Q ss_pred -----------------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 187 -----------------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 187 -----------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+.++...|++||++++.++++++.|++++||+ +|+|+||.+++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~-v~~v~PG~v~t 190 (257)
T 1fjh_A 124 KNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVR-LNTIAPGATET 190 (257)
T ss_dssp GCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCE-EEEEEECC---
T ss_pred cchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeE-EEEEeeCCCCC
Confidence 124567789999999999999999999999999 77999999874
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=196.84 Aligned_cols=157 Identities=15% Similarity=0.126 Sum_probs=139.4
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|+ +|++ |++++|+.. .+.+|++++++++++++++ +++|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~--V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d 60 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAE--VITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVD 60 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSE--EEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCe--EEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence 79999999999999999999 9996 888888763 3679999999999988765 7999
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+. ++||++||..+..+ .
T Consensus 61 ~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~~iv~~sS~~~~~~---~ 122 (202)
T 3d7l_A 61 AIVSATGSA-------TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--------GSFTLTTGIMMEDP---I 122 (202)
T ss_dssp EEEECCCCC-------CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--------EEEEEECCGGGTSC---C
T ss_pred EEEECCCCC-------CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--------CEEEEEcchhhcCC---C
Confidence 999999976 35567788899999999999999999999999998653 39999999877655 6
Q ss_pred CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 190 GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
++...|+++|++++.+++.++.|+ ++||+ +|++.||.++
T Consensus 123 ~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~-v~~v~pg~v~ 161 (202)
T 3d7l_A 123 VQGASAAMANGAVTAFAKSAAIEM-PRGIR-INTVSPNVLE 161 (202)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTSC-STTCE-EEEEEECCBG
T ss_pred CccHHHHHHHHHHHHHHHHHHHHc-cCCeE-EEEEecCccC
Confidence 777899999999999999999999 88999 6699999885
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-30 Score=240.98 Aligned_cols=187 Identities=21% Similarity=0.276 Sum_probs=158.0
Q ss_pred ccccccCeEEEEecCCCc-hhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhh-hc---CCCceeEEEecCCChHHHH
Q 026924 22 ASVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLK-NR---FPERLDVLQLDLTVESTIE 95 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~g-IG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~-~~---~~~~v~~~~~Dls~~~~v~ 95 (231)
+.++++||++|||||++| ||+++|++|++.|++ |+++ +|+.+..+...+.+ +. .+.++.++++|++|+++++
T Consensus 470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~--VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe 547 (1688)
T 2pff_A 470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK--VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE 547 (1688)
T ss_dssp SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCE--EEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHHCcCE--EEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence 445688999999999998 999999999999997 7666 67766665543333 22 2568999999999999999
Q ss_pred HHHHHHHHH-----cC-CccEEEEccccCCCCCCCCCCc-ccchhc--hHHHhhhhhhhhhHHHHHHHHh--hhhhhcCC
Q 026924 96 ASAKSIKEK-----YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKHM--SPLLKVGG 164 (231)
Q Consensus 96 ~~~~~~~~~-----~g-~id~lv~~ag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~l~~~~ 164 (231)
++++++.++ +| ++|+||||||+.. .. ++.+.+ .++|++.+++|+.+++.+++.+ .|.|.+++
T Consensus 548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~-------~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg 620 (1688)
T 2pff_A 548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-------QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP 620 (1688)
T ss_dssp HHHHHHHSCTTSSSCCCCCCEEECCCCCCC-------CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC
T ss_pred HHHHHHHHhccccccCCCCeEEEECCCcCC-------CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC
Confidence 999999988 77 9999999999863 34 566777 8999999999999999999998 78887765
Q ss_pred CCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHH-HHHhhhhccccCCceeeeccCCCCC
Q 026924 165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHD-KICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~-~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.| +||++||..+..+ +...|++||+|+++| ++.++.++++. |+ +|+|+||.++
T Consensus 621 gG------rIVnISSiAG~~G-----g~saYaASKAAL~aLttrsLAeEla~~-IR-VNaVaPG~V~ 674 (1688)
T 2pff_A 621 AQ------VILPMSPNHGTFG-----GDGMYSESKLSLETLFNRWHSESWANQ-LT-VCGAIIGWTR 674 (1688)
T ss_dssp EE------ECCCCCSCTTTSS-----CBTTHHHHHHHHTHHHHHTTTSSCTTT-EE-CCCCCCCCCC
T ss_pred CC------EEEEEEChHhccC-----CchHHHHHHHHHHHHHHHHHHHHcCCC-eE-EEEEEECcCc
Confidence 44 9999999887654 567899999999999 88899999887 98 7799999997
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=222.92 Aligned_cols=177 Identities=19% Similarity=0.206 Sum_probs=152.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC---ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|++|||||+||||+++|++|+++|++ +|++++|+... .+.+.+.++..+.++.++.||++|++++.++++++.++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAA-HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCc-EEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 589999999999999999999999996 68888987433 33455556666889999999999999999999998777
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+++|+||||||+.. ....+.+.+.++|++.+++|+.+++++.+.+.+... ++||++||..+..
T Consensus 318 -g~ld~vVh~AGv~~------~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~----------~~iV~~SS~a~~~ 380 (496)
T 3mje_A 318 -APLTAVFHSAGVAH------DDAPVADLTLGQLDALMRAKLTAARHLHELTADLDL----------DAFVLFSSGAAVW 380 (496)
T ss_dssp -SCEEEEEECCCCCC------SCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCC----------SEEEEEEEHHHHT
T ss_pred -CCCeEEEECCcccC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCC----------CEEEEEeChHhcC
Confidence 79999999999863 366788999999999999999999999998876643 2999999999988
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
+ .+++..|+++|+++++|++. +++.||+ +|+|+||.++
T Consensus 381 g---~~g~~~YaAaKa~ldala~~----~~~~Gi~-v~sV~pG~w~ 418 (496)
T 3mje_A 381 G---SGGQPGYAAANAYLDALAEH----RRSLGLT-ASSVAWGTWG 418 (496)
T ss_dssp T---CTTCHHHHHHHHHHHHHHHH----HHHTTCC-CEEEEECEES
T ss_pred C---CCCcHHHHHHHHHHHHHHHH----HHhcCCe-EEEEECCccc
Confidence 8 78899999999999998874 5577999 6699999763
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=233.82 Aligned_cols=175 Identities=19% Similarity=0.292 Sum_probs=154.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHH-hcCCccEEEEeecCC---CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~-~~G~~~~vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++|++|||||++|||+++|++|+ ++|++ +|++.+|+. +..+.+.++++..+.++.++.||++|+++++++++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVR-NLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCC-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCc-EEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 58999999999999999999999 89997 699999984 33444555556668899999999999999999999998
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++ +||+||||||+. .+..+.+.+.++|++.+++|+.+++++.+++.|.| +||++||..+
T Consensus 608 ~~~-~id~lVnnAGv~-------~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------------~iV~~SS~ag 667 (795)
T 3slk_A 608 DEH-PLTAVVHAAGVL-------DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------------ALVLFSSVSG 667 (795)
T ss_dssp TTS-CEEEEEECCCCC-------CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------------EEEEEEETHH
T ss_pred HhC-CCEEEEECCCcC-------CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------EEEEEccHHh
Confidence 776 999999999987 46788999999999999999999999999997776 7999999999
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
..+ .+++..|+++|+ |++++++++++.||+ +|+|+||.++
T Consensus 668 ~~g---~~g~~~YaAaka----~~~alA~~~~~~Gi~-v~sI~pG~v~ 707 (795)
T 3slk_A 668 VLG---SGGQGNYAAANS----FLDALAQQRQSRGLP-TRSLAWGPWA 707 (795)
T ss_dssp HHT---CSSCHHHHHHHH----HHHHHHHHHHHTTCC-EEEEEECCCS
T ss_pred cCC---CCCCHHHHHHHH----HHHHHHHHHHHcCCe-EEEEECCeEC
Confidence 988 799999999995 666667788889999 7799999886
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=243.10 Aligned_cols=186 Identities=22% Similarity=0.274 Sum_probs=157.5
Q ss_pred cccccCeEEEEecCCCc-hhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhh----hcCCCceeEEEecCCChHHHHH
Q 026924 23 SVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLK----NRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~g-IG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~----~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
.++++||++|||||++| ||+++|++|++.|++ |+++ +|+.+..+.+.+.+ ...+.++.+++||++|++++++
T Consensus 670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~--Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~a 747 (1887)
T 2uv8_A 670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK--VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA 747 (1887)
T ss_dssp CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCE--EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHH
Confidence 34678999999999998 999999999999997 7776 56665554433222 2235689999999999999999
Q ss_pred HHHHHHHH-----cC-CccEEEEccccCCCCCCCCCCc-ccchhc--hHHHhhhhhhhhhHHHHHHHHh--hhhhhcCCC
Q 026924 97 SAKSIKEK-----YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKHM--SPLLKVGGT 165 (231)
Q Consensus 97 ~~~~~~~~-----~g-~id~lv~~ag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~l~~~~~ 165 (231)
+++++.++ +| +||+||||||+.. .. ++.+.+ .++|++++++|+.+++.+++.+ .|.|.+++.
T Consensus 748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~-------~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~ 820 (1887)
T 2uv8_A 748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPE-------QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPA 820 (1887)
T ss_dssp HHHHHHSCTTTTSCCCCCSEEEECCCCCC-------CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCE
T ss_pred HHHHHHHhccccccCCCCeEEEECCCcCC-------CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCC
Confidence 99999988 66 9999999999863 44 677777 8999999999999999999988 788877654
Q ss_pred CcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHH-HHHhhhhccccCCceeeeccCCCCC
Q 026924 166 GIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHD-KICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 166 ~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~-~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
| +||++||..+..+ ++..|++||+|+++| ++.++.+++++ |+ +|+|+||.++
T Consensus 821 G------~IVnISS~ag~~g-----g~~aYaASKAAL~~Lttr~lA~ela~~-Ir-VNaV~PG~V~ 873 (1887)
T 2uv8_A 821 Q------VILPMSPNHGTFG-----GDGMYSESKLSLETLFNRWHSESWANQ-LT-VCGAIIGWTR 873 (1887)
T ss_dssp E------EEEEECSCTTCSS-----CBTTHHHHHHHGGGHHHHHHHSSCTTT-EE-EEEEEECCEE
T ss_pred C------EEEEEcChHhccC-----CCchHHHHHHHHHHHHHHHHHHHhCCC-eE-EEEEEecccc
Confidence 4 9999999887654 567899999999999 99999999988 99 7799999987
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=197.60 Aligned_cols=168 Identities=21% Similarity=0.243 Sum_probs=140.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|+||++++++|+++ + |++++|+.+..+.+.+... . .++.+|++|++++++++++ ++++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~--V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~i 67 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--D--LLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPL 67 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--E--EEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--C--EEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence 57999999999999999999998 5 8889998755554433332 2 7889999999999998887 6899
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++. +.+. ++||++||..+..+
T Consensus 68 d~vi~~ag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~------~~iv~~sS~~~~~~--- 127 (207)
T 2yut_A 68 DLLVHAVGKA-------GRASVREAGRDLVEEMLAAHLLTAAFVLKHAR----FQKG------ARAVFFGAYPRYVQ--- 127 (207)
T ss_dssp EEEEECCCCC-------CCBCSCC---CHHHHHHHHHHHHHHHHHHHCC----EEEE------EEEEEECCCHHHHS---
T ss_pred CEEEECCCcC-------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH----hcCC------cEEEEEcChhhccC---
Confidence 9999999976 35566778889999999999999999999982 2222 49999999887766
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++.+++.++.|++++||+ +|++.||.++
T Consensus 128 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~-v~~v~pg~v~ 168 (207)
T 2yut_A 128 VPGFAAYAAAKGALEAYLEAARKELLREGVH-LVLVRLPAVA 168 (207)
T ss_dssp STTBHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEECCCCBC
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhhCCE-EEEEecCccc
Confidence 5778899999999999999999999999999 6699999986
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=237.92 Aligned_cols=186 Identities=21% Similarity=0.236 Sum_probs=153.7
Q ss_pred cccccCeEEEEecCCCc-hhHHHHHHHHhcCCccEEEEee-cCCCCccchhh----hhhcCCCceeEEEecCCChHHHHH
Q 026924 23 SVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD----LKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~g-IG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~----~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
.++++||++|||||++| ||+++|++|++.|++ |++++ |+....+...+ .....+.++.++.||++|++++++
T Consensus 647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~--VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~a 724 (1878)
T 2uv9_A 647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAK--VIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEA 724 (1878)
T ss_dssp CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCE--EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHH
Confidence 35688999999999999 999999999999997 77775 55544433222 222236689999999999999999
Q ss_pred HHHHHHHH---cC-CccEEEEccccCCCCCCCCCCc-ccchhc--hHHHhhhhhhhhhHHHHHHHH--hhhhhhcCCCCc
Q 026924 97 SAKSIKEK---YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKH--MSPLLKVGGTGI 167 (231)
Q Consensus 97 ~~~~~~~~---~g-~id~lv~~ag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~l~~~~~~~ 167 (231)
+++++.+. +| +||+||||||+.. .. ++.+.+ .++|++++++|+.+++.+++. ..+.|.+++.
T Consensus 725 lv~~i~~~~~~~G~~IDiLVnNAGi~~-------~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~-- 795 (1878)
T 2uv9_A 725 LVNYIYDTKNGLGWDLDYVVPFAAIPE-------NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPA-- 795 (1878)
T ss_dssp HHHHHHCSSSSCCCCCSEEEECCCCCC-------TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCE--
T ss_pred HHHHHHHhhcccCCCCcEEEeCccccc-------CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCC--
Confidence 99999988 89 9999999999863 44 677777 799999999999999999877 6788876654
Q ss_pred ccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhh-hccccCCceeeeccCCCCC
Q 026924 168 ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSG-VWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 168 ~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~-e~~~~gi~~~~~v~pg~~~ 230 (231)
++||++||..+..+ ++..|++||+++++|++.++. ++++. |+ +|+|+||.++
T Consensus 796 ----G~IVnISS~ag~~g-----g~~aYaASKAAL~aLt~~laAeEla~~-Ir-VNaVaPG~V~ 848 (1878)
T 2uv9_A 796 ----QVILPLSPNHGTFG-----NDGLYSESKLALETLFNRWYSESWGNY-LT-ICGAVIGWTR 848 (1878)
T ss_dssp ----EECCEECSCSSSSS-----CCSSHHHHHHHHTTHHHHHHHSTTTTT-EE-EEEEEECCBC
T ss_pred ----CEEEEEcchhhccC-----CchHHHHHHHHHHHHHHHHHHHHcCCC-eE-EEEEEeccee
Confidence 39999999988755 356899999999999887655 57776 98 7799999987
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-27 Score=206.80 Aligned_cols=177 Identities=18% Similarity=0.201 Sum_probs=150.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc---cchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA---TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~---~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|||||+||||++++++|+++|++ +|++++|+.... +.+.+.++..+.++.++.||++|++++.++++++ +
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence 5799999999999999999999999997 688999986532 3344445555778999999999999999999998 5
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|+||||||.. ....+.+.+.++|++.+++|+.+++++.+.+.+. +. ++||++||..+.
T Consensus 303 ~~g~ld~VIh~AG~~-------~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~------~~~V~~SS~a~~ 365 (486)
T 2fr1_A 303 DDVPLSAVFHAAATL-------DDGTVDTLTGERIERASRAKVLGARNLHELTREL----DL------TAFVLFSSFASA 365 (486)
T ss_dssp TTSCEEEEEECCCCC-------CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----CC------SEEEEEEEHHHH
T ss_pred hcCCCcEEEECCccC-------CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----CC------CEEEEEcChHhc
Confidence 678999999999987 3667888999999999999999999999987653 22 299999999888
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .+++..|+++|++++.|++. +...|++ +++|+||.++
T Consensus 366 ~g---~~g~~~Yaaaka~l~~la~~----~~~~gi~-v~~i~pG~~~ 404 (486)
T 2fr1_A 366 FG---APGLGGYAPGNAYLDGLAQQ----RRSDGLP-ATAVAWGTWA 404 (486)
T ss_dssp TC---CTTCTTTHHHHHHHHHHHHH----HHHTTCC-CEEEEECCBC
T ss_pred CC---CCCCHHHHHHHHHHHHHHHH----HHhcCCe-EEEEECCeeC
Confidence 87 68889999999999998764 4567999 5599999864
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=188.41 Aligned_cols=163 Identities=18% Similarity=0.173 Sum_probs=135.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|+||++++++|+++|++ |++++|+.+..+. .+.+|++++++++++++++ .+++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~ 63 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHT--VIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVL 63 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCc
Confidence 58999999999999999999999996 8888998765432 1568999999998888754 3789
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||||... . .+.|++.+++|+.+++.+++++.+.|.+.+.+ +||++||..+..+...
T Consensus 64 d~vi~~Ag~~~------~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~~~~ 123 (255)
T 2dkn_A 64 DGLVCCAGVGV------T--------AANSGLVVAVNYFGVSALLDGLAEALSRGQQP------AAVIVGSIAATQPGAA 123 (255)
T ss_dssp SEEEECCCCCT------T--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSTTGG
T ss_pred cEEEECCCCCC------c--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCc------eEEEEecccccccccc
Confidence 99999999652 0 13478899999999999999999999877554 9999999877644200
Q ss_pred -----------------------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 189 -----------------------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 189 -----------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++...|+++|++++.+++.++.++++.|++ +|++.||.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~-v~~v~pg~v~ 187 (255)
T 2dkn_A 124 ELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVR-LNVVAPGAVE 187 (255)
T ss_dssp GCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCE-EEEEEECCBC
T ss_pred ccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcE-EEEEcCCccc
Confidence 0456689999999999999999999999999 6699999886
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-26 Score=199.82 Aligned_cols=173 Identities=20% Similarity=0.224 Sum_probs=146.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC---ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++|||||+||||++++++|+++|++ +|++++|+... .+.+.+.+...+.++.++.||++|++++++++++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--- 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--- 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence 5799999999999999999999999996 68888998643 3334444555577899999999999999998887
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||||.. ....+.+.+.++|++.+++|+.+++++.+.+.+.. +. ++||++||..+.
T Consensus 334 --~~ld~VVh~AGv~-------~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~~------~~~V~~SS~a~~ 395 (511)
T 2z5l_A 334 --YPPNAVFHTAGIL-------DDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---GL------DAFVLFSSVTGT 395 (511)
T ss_dssp --SCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---TC------CCEEEEEEGGGT
T ss_pred --CCCcEEEECCccc-------CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---CC------CEEEEEeCHHhc
Confidence 7899999999987 46678889999999999999999999999875431 22 289999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+ .+++..|+++|++++.|++.+ ...|++ +++|+||.+
T Consensus 396 ~g---~~g~~~YaaaKa~ld~la~~~----~~~gi~-v~sv~pG~~ 433 (511)
T 2z5l_A 396 WG---NAGQGAYAAANAALDALAERR----RAAGLP-ATSVAWGLW 433 (511)
T ss_dssp TC---CTTBHHHHHHHHHHHHHHHHH----HTTTCC-CEEEEECCB
T ss_pred CC---CCCCHHHHHHHHHHHHHHHHH----HHcCCc-EEEEECCcc
Confidence 87 688899999999999999864 467999 559999987
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=232.94 Aligned_cols=192 Identities=20% Similarity=0.182 Sum_probs=147.5
Q ss_pred cccCeEEEEecCCCc-hhHHHHHHHHhcCCccEEEEeecCCCC-----ccchhhhhhcCCCceeEEEecCCChHHHHHHH
Q 026924 25 KWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 25 ~~~~k~~LVtGas~g-IG~aia~~l~~~G~~~~vi~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
.++||++|||||++| ||+++|+.|++.|++ |++++|+.+. .+.+.+.+...+.++..+++|+++++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~--Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGAT--VIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCE--EEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCE--EEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence 479999999999999 999999999999997 8888998766 44444455455678999999999999999999
Q ss_pred HHHHH----HcCCccEEEEccccCC-CCCCCCCCcccchhchHHHhhh----hhhhhhHHHHHHHHhhhhhhcCCCCccc
Q 026924 99 KSIKE----KYGSLNLLINASGILS-IPNVLQPETTLNKVEKSSLMLA----YEVNAVGPILVIKHMSPLLKVGGTGIER 169 (231)
Q Consensus 99 ~~~~~----~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~n~~~~~~~~~~~~~~l~~~~~~~~~ 169 (231)
+++.+ .+|++|+||||||+.. ..+ ......+.+.++|++. +++|+.+++.+++.+.+.|..++.+..
T Consensus 2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~---~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~- 2286 (3089)
T 3zen_D 2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFP---FAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASR- 2286 (3089)
T ss_dssp HHHTSCCEEEESSSEEEECCCCCCSEEEE---CCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHhhhhhhcCCCCEEEECCCcccccCc---ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce-
Confidence 99988 8999999999999721 000 0112223344445444 999999999999999999987654311
Q ss_pred CceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhh--ccccCCceeeeccCCCCC
Q 026924 170 DVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGV--WSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 170 ~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e--~~~~gi~~~~~v~pg~~~ 230 (231)
...+++.++..+. .++...|++||+|+.+|+++++.| +++ +|+ +|+|+||.|+
T Consensus 2287 -~~ii~~~ss~~g~-----~g~~~aYsASKaAl~~LtrslA~E~~~a~-~Ir-Vn~v~PG~v~ 2341 (3089)
T 3zen_D 2287 -LHVVLPGSPNRGM-----FGGDGAYGEAKSALDALENRWSAEKSWAE-RVS-LAHALIGWTK 2341 (3089)
T ss_dssp -EEEEEEECSSTTS-----CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEE-EEEEECCCEE
T ss_pred -eEEEEECCccccc-----CCCchHHHHHHHHHHHHHHHHHhccccCC-CeE-EEEEeecccC
Confidence 1234444443332 234568999999999999999999 664 698 7799999986
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=220.90 Aligned_cols=162 Identities=12% Similarity=0.049 Sum_probs=128.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc---hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|++|||||++|||+++|++|+++|++ +|++++|+....+. ..+.++..+.++.++.||++|+++++++++++.
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~- 1960 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQ-KLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT- 1960 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCC-EEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-
Confidence 5899999999999999999999999997 68888998766543 233334456789999999999999999999987
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||.. .+..+.+.+.++|++.+++|+.|++++.+.+.+.|.+. | +||++||..+.
T Consensus 1961 ~~g~id~lVnnAgv~-------~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g------~iV~iSS~ag~ 2025 (2512)
T 2vz8_A 1961 QLGPVGGVFNLAMVL-------RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--D------YFVIFSSVSCG 2025 (2512)
T ss_dssp HHSCEEEEEECCCC-----------------------CTTTTHHHHHHHHHHHHHHCTTC--C------EEEEECCHHHH
T ss_pred hcCCCcEEEECCCcC-------CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--C------EEEEecchhhc
Confidence 489999999999987 46778899999999999999999999999999888654 2 99999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHH
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKIC 208 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~ 208 (231)
.+ .+++..|+++|+++++|++.
T Consensus 2026 ~g---~~g~~~Y~aaKaal~~l~~~ 2047 (2512)
T 2vz8_A 2026 RG---NAGQANYGFANSAMERICEK 2047 (2512)
T ss_dssp TT---CTTCHHHHHHHHHHHHHHHH
T ss_pred CC---CCCcHHHHHHHHHHHHHHHH
Confidence 88 68889999999999999993
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=172.86 Aligned_cols=156 Identities=15% Similarity=0.064 Sum_probs=124.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|++|||||+|+||++++++|+++|++ |++.+|++...+ +.++.++.+|++|++++.++++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~--V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~------- 63 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEI--LRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA------- 63 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEE--EEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCE--EEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence 4689999999999999999999999996 889999875543 4578999999999999988776
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+||||||.. +.+.|++.+++|+.+++.+++++.+. +.+ +||++||..+....
T Consensus 64 ~~D~vi~~Ag~~---------------~~~~~~~~~~~N~~g~~~l~~a~~~~----~~~------~iv~~SS~~~~g~~ 118 (267)
T 3rft_A 64 GCDGIVHLGGIS---------------VEKPFEQILQGNIIGLYNLYEAARAH----GQP------RIVFASSNHTIGYY 118 (267)
T ss_dssp TCSEEEECCSCC---------------SCCCHHHHHHHHTHHHHHHHHHHHHT----TCC------EEEEEEEGGGGTTS
T ss_pred CCCEEEECCCCc---------------CcCCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEEcchHHhCCC
Confidence 689999999963 22457889999999999999998432 333 99999998765211
Q ss_pred ---------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 ---------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ---------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+.++...|+.||++.+.+++.++.++ |++ +++|.||.|
T Consensus 119 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~-~~~vr~~~v 166 (267)
T 3rft_A 119 PQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQE-TALVRIGSC 166 (267)
T ss_dssp BTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCC-EEEEEECBC
T ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCe-EEEEEeecc
Confidence 223455789999999999999998876 566 335555544
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=167.89 Aligned_cols=193 Identities=13% Similarity=0.029 Sum_probs=140.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHH-hcCCccEEEEeecCCCCccc------------hhhhhhcCCCceeEEEecCCCh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~-~~G~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
...+|++||||||+|||++++..|+ +.|+. ++++.++.+..+. ..+..+..|.+...++||++++
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~--vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~ 124 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAA--TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD 124 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCC--EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence 3457999999999999999999999 68997 7777776544332 2345566688999999999999
Q ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCC--CC-------CCCCC------------------cccchhchH---HHhhh
Q 026924 92 STIEASAKSIKEKYGSLNLLINASGILSI--PN-------VLQPE------------------TTLNKVEKS---SLMLA 141 (231)
Q Consensus 92 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~--~~-------~~~~~------------------~~~~~~~~~---~~~~~ 141 (231)
++++++++++++++|+||+||||++.... |. +.+|. ..+...+.+ .+.+.
T Consensus 125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v 204 (401)
T 4ggo_A 125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV 204 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence 99999999999999999999999997530 00 00000 011122333 34445
Q ss_pred hhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCcee
Q 026924 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYM 221 (231)
Q Consensus 142 ~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~ 221 (231)
|....++.|...+...+.|.+. ++++.+|+..+.... |...++.++++|++|+..++.|+.++++ ++ +
T Consensus 205 Mg~s~~s~w~~al~~a~lla~G--------~siva~SYiGse~t~-P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~-a 272 (401)
T 4ggo_A 205 MGGEDWERWIKQLSKEGLLEEG--------CITLAYSYIGPEATQ-ALYRKGTIGKAKEHLEATAHRLNKENPS--IR-A 272 (401)
T ss_dssp HSSHHHHHHHHHHHHTTCEEEE--------EEEEEEECCCCGGGH-HHHTTSHHHHHHHHHHHHHHHHHHHCTT--EE-E
T ss_pred HhhhHHHHHHHHHHhhhcccCC--------ceEEEEeccCcceee-cCCCccHHHHHHHHHHHHHHHHHHhcCC--Cc-E
Confidence 5556677788888888888664 499999997654331 0123346899999999999999999985 66 6
Q ss_pred eeccCCCCCC
Q 026924 222 YSVASRHCRY 231 (231)
Q Consensus 222 ~~v~pg~~~~ 231 (231)
|+++||.+.+
T Consensus 273 ~v~v~~a~vT 282 (401)
T 4ggo_A 273 FVSVNKGLVT 282 (401)
T ss_dssp EEEECCCCCC
T ss_pred EEEEcCcccc
Confidence 6777776653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=164.60 Aligned_cols=175 Identities=17% Similarity=0.129 Sum_probs=131.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++|++|||||+|+||++++++|+++|++ |++++|+....+. ..+... ...++.++.+|++|.+++.++++..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~---- 74 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYE--VYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV---- 74 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc----
Confidence 5789999999999999999999999996 8888998765432 111111 1347888999999999999888876
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc-
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI- 184 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~- 184 (231)
++|+||||||... .+.+.+++++.+++|+.++..+++++.+. .. . +++|++||....-
T Consensus 75 -~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~--~------~~iv~~SS~~vyg~ 133 (345)
T 2z1m_A 75 -QPDEVYNLAAQSF-----------VGVSFEQPILTAEVDAIGVLRILEALRTV-KP--D------TKFYQASTSEMFGK 133 (345)
T ss_dssp -CCSEEEECCCCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT--T------CEEEEEEEGGGGCS
T ss_pred -CCCEEEECCCCcc-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC--C------ceEEEEechhhcCC
Confidence 7999999999642 23455678889999999999999999853 11 1 2999999975321
Q ss_pred -------CCCCCCCccchhhhHHHHHHHHHHhhhhcc---ccCCceeeeccCCCCC
Q 026924 185 -------GDNRLGGWHSYRASKAALNHDKICVSGVWS---KEGSSYMYSVASRHCR 230 (231)
Q Consensus 185 -------~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~---~~gi~~~~~v~pg~~~ 230 (231)
...+.++...|+.+|++.+.+++.++.+++ ..+++ .|.+.||..+
T Consensus 134 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~-~~~~gpg~~~ 188 (345)
T 2z1m_A 134 VQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGIL-FNHESPLRGI 188 (345)
T ss_dssp CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTSCT
T ss_pred CCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeee-eeecCCCCCC
Confidence 111234556899999999999999998865 23333 5678888654
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=164.28 Aligned_cols=176 Identities=14% Similarity=0.219 Sum_probs=137.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.++++++|||||+|+||++++++|+++|++ |++++|+....+.+.+... .+.++.++.+|+++++++.++++..
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--- 79 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF--- 79 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCe--EEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc---
Confidence 357899999999999999999999999996 8888998766655443332 2457899999999999999888775
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++|+|||+||... .+.+.+++++.+++|+.++..+++++.+. . +. +++|++||....-
T Consensus 80 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~--~~------~~~v~~SS~~vyg 137 (357)
T 1rkx_A 80 --QPEIVFHMAAQPL-----------VRLSYSEPVETYSTNVMGTVYLLEAIRHV-G--GV------KAVVNITSDKCYD 137 (357)
T ss_dssp --CCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-C--CC------CEEEEECCGGGBC
T ss_pred --CCCEEEECCCCcc-----------cccchhCHHHHHHHHHHHHHHHHHHHHHh-C--CC------CeEEEecCHHHhC
Confidence 7999999998531 23455677889999999999999998763 1 12 2999999975321
Q ss_pred C---------CCCCCCccchhhhHHHHHHHHHHhhhhcc------ccCCceeeeccCCCC
Q 026924 185 G---------DNRLGGWHSYRASKAALNHDKICVSGVWS------KEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~---------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~------~~gi~~~~~v~pg~~ 229 (231)
. ..+..+...|+.+|.+.+.+++.++.++. +.|++ ++++.||.+
T Consensus 138 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~-~~~lrp~~v 196 (357)
T 1rkx_A 138 NKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTA-VATVRAGNV 196 (357)
T ss_dssp CCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCE-EEEEECCCE
T ss_pred CCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCce-EEEEeecee
Confidence 1 01234556899999999999999998875 56999 448888865
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-22 Score=166.74 Aligned_cols=167 Identities=15% Similarity=0.161 Sum_probs=132.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++|++|||||+|+||++++++|++. |+. .|++.+|++...+.+.+... ..++.++.+|++|.+++.++++
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~-~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~---- 90 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAK-KIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE---- 90 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCS-EEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT----
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCC-EEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh----
Confidence 467999999999999999999999999 983 38888998665544443332 3578999999999988876654
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+|||+||... . ......+.+.+++|+.++.++++++.+.- . +++|++||..+.
T Consensus 91 ---~~D~Vih~Aa~~~--------~---~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~----v------~~~V~~SS~~~~ 146 (344)
T 2gn4_A 91 ---GVDICIHAAALKH--------V---PIAEYNPLECIKTNIMGASNVINACLKNA----I------SQVIALSTDKAA 146 (344)
T ss_dssp ---TCSEEEECCCCCC--------H---HHHHHSHHHHHHHHHHHHHHHHHHHHHTT----C------SEEEEECCGGGS
T ss_pred ---cCCEEEECCCCCC--------C---CchhcCHHHHHHHHHHHHHHHHHHHHhCC----C------CEEEEecCCccC
Confidence 6899999999642 1 12223456789999999999999998652 2 299999997653
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
. +...|+++|++.+.+++.++.++++.|++ ++++.||.+
T Consensus 147 ~------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~-~~~vRpg~v 185 (344)
T 2gn4_A 147 N------PINLYGATKLCSDKLFVSANNFKGSSQTQ-FSVVRYGNV 185 (344)
T ss_dssp S------CCSHHHHHHHHHHHHHHHGGGCCCSSCCE-EEEECCCEE
T ss_pred C------CccHHHHHHHHHHHHHHHHHHHhCCCCcE-EEEEEeccE
Confidence 2 23589999999999999999999889999 549999865
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-22 Score=159.96 Aligned_cols=159 Identities=16% Similarity=0.167 Sum_probs=119.6
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCce-eEEEecCCChHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERL-DVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dls~~~~v~~~~~~ 100 (231)
...++++|++|||||+|+||++++++|+++|++ |++++|+.+..+.+.+ .++ .++.+|++ +.
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~--V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~ 77 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHE--PVAMVRNEEQGPELRE------RGASDIVVANLE---------ED 77 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHH------TTCSEEEECCTT---------SC
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCCe--EEEEECChHHHHHHHh------CCCceEEEcccH---------HH
Confidence 345788999999999999999999999999996 8889998765544322 257 88999998 33
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+.+.++++|+||||||... .++|++.+++|+.++..+++++... +. ++||++||.
T Consensus 78 ~~~~~~~~D~vi~~ag~~~---------------~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~iv~~SS~ 132 (236)
T 3e8x_A 78 FSHAFASIDAVVFAAGSGP---------------HTGADKTILIDLWGAIKTIQEAEKR----GI------KRFIMVSSV 132 (236)
T ss_dssp CGGGGTTCSEEEECCCCCT---------------TSCHHHHHHTTTHHHHHHHHHHHHH----TC------CEEEEECCT
T ss_pred HHHHHcCCCEEEECCCCCC---------------CCCccccchhhHHHHHHHHHHHHHc----CC------CEEEEEecC
Confidence 4455678999999999642 1457889999999999999998433 22 299999996
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+..+....+....|+.+|++++.+++ +.|++ ++++.||.+.
T Consensus 133 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~-~~~lrpg~v~ 174 (236)
T 3e8x_A 133 GTVDPDQGPMNMRHYLVAKRLADDELK-------RSSLD-YTIVRPGPLS 174 (236)
T ss_dssp TCSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSE-EEEEEECSEE
T ss_pred CCCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCC-EEEEeCCccc
Confidence 655431100356789999999999876 67899 5599999763
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.1e-22 Score=159.33 Aligned_cols=155 Identities=13% Similarity=0.019 Sum_probs=120.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCC--ccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~--~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++|++|||||+|+||++++++|+++|+ + |++++|+.+..+... ..++.++.+|++|++++.++++
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~--- 83 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSK--VTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ--- 83 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSE--EEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS---
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCE--EEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc---
Confidence 46789999999999999999999999999 7 888899876654322 1257889999999988776553
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+||||||... ....+++.+++|+.++..+++++.+ .+.+ +||++||..+
T Consensus 84 ----~~d~vi~~ag~~~--------------~~~~~~~~~~~n~~~~~~~~~~~~~----~~~~------~iv~~SS~~~ 135 (242)
T 2bka_A 84 ----GHDVGFCCLGTTR--------------GKAGAEGFVRVDRDYVLKSAELAKA----GGCK------HFNLLSSKGA 135 (242)
T ss_dssp ----SCSEEEECCCCCH--------------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCC------EEEEECCTTC
T ss_pred ----CCCEEEECCCccc--------------ccCCcccceeeeHHHHHHHHHHHHH----CCCC------EEEEEccCcC
Confidence 6899999999541 1134678899999999999887643 3333 9999999765
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.. +....|+++|++++.+++.++.+ + +++|.||.+.
T Consensus 136 ~~-----~~~~~Y~~sK~~~e~~~~~~~~~------~-~~~vrpg~v~ 171 (242)
T 2bka_A 136 DK-----SSNFLYLQVKGEVEAKVEELKFD------R-YSVFRPGVLL 171 (242)
T ss_dssp CT-----TCSSHHHHHHHHHHHHHHTTCCS------E-EEEEECCEEE
T ss_pred CC-----CCcchHHHHHHHHHHHHHhcCCC------C-eEEEcCceec
Confidence 42 33457999999999999876433 6 5589998764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-21 Score=160.31 Aligned_cols=170 Identities=15% Similarity=0.126 Sum_probs=129.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..+.+++++++|||||+|+||++++++|+++|++ |++++|+........+.. .++.++.+|++|.+++.+++++
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHE--ILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCE--EEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhh
Confidence 3445778999999999999999999999999996 888888755433211111 4688899999999999988876
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
+ ++|+||||||... .. +.++++ +++|+.++..+++++... +.+ ++|++||.
T Consensus 87 ~-----~~D~vih~A~~~~-------~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~------~iV~~SS~ 137 (330)
T 2pzm_A 87 F-----KPTHVVHSAAAYK-------DP-----DDWAED--AATNVQGSINVAKAASKA----GVK------RLLNFQTA 137 (330)
T ss_dssp H-----CCSEEEECCCCCS-------CT-----TCHHHH--HHHHTHHHHHHHHHHHHH----TCS------EEEEEEEG
T ss_pred c-----CCCEEEECCccCC-------Cc-----cccChh--HHHHHHHHHHHHHHHHHc----CCC------EEEEecCH
Confidence 5 7999999999652 11 334555 899999999999998742 222 99999998
Q ss_pred ccccCCCCC---C------CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 181 VGSIGDNRL---G------GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 181 ~~~~~~~~~---~------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
... +.... + +...|+.+|++.+.+++.+ ++....+|..|.+.||.
T Consensus 138 ~~~-~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~ 191 (330)
T 2pzm_A 138 LCY-GRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL 191 (330)
T ss_dssp GGG-CSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC
T ss_pred HHh-CCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC
Confidence 653 32111 2 5568999999999999998 66666777667888874
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=157.95 Aligned_cols=169 Identities=14% Similarity=0.047 Sum_probs=126.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-hcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++++|||||+|+||++++++|+++|++ |++++|+....+...+.. ...+.++.++.+|++|++++.+++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD--VVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA----- 76 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc--EEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----
Confidence 4679999999999999999999999997 888899877665543332 22356889999999999999988876
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+||||||... . ....+..++.+++|+.++..+++++. +.+.+ +||++||.... +
T Consensus 77 ~~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~iv~~SS~~~~-g 134 (341)
T 3enk_A 77 HPITAAIHFAALKA-------V----GESVAKPIEYYRNNLDSLLSLLRVMR----ERAVK------RIVFSSSATVY-G 134 (341)
T ss_dssp SCCCEEEECCCCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCC------EEEEEEEGGGB-C
T ss_pred cCCcEEEECccccc-------c----CccccChHHHHHHHHHHHHHHHHHHH----hCCCC------EEEEEecceEe-c
Confidence 48999999999652 1 22334456788999999999888764 33333 99999996543 2
Q ss_pred C---------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 186 D---------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 186 ~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
. .+......|+.+|.+.+.+++.++.++. +++++ .+.|+
T Consensus 135 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~-~lRp~ 182 (341)
T 3enk_A 135 VPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVA-TLRYF 182 (341)
T ss_dssp SCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEE-EEEEC
T ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEE-EEeec
Confidence 1 1223346899999999999999998875 46633 55543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=156.80 Aligned_cols=163 Identities=15% Similarity=0.131 Sum_probs=124.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.+.+++|||||+|+||++++++|+++|++ |++++|+... +. . ++.++.+|++|.+++.++++.
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~----- 72 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVE--VFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD----- 72 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCE--EEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence 35689999999999999999999999996 8888887654 22 1 678899999999999888876
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
+++|+|||+||... .+.+.+++++.+++|+.++..+++++ +.+. +. +++|++||......
T Consensus 73 ~~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~------~~iv~~SS~~v~g~ 132 (321)
T 2pk3_A 73 IKPDYIFHLAAKSS-----------VKDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LD------CRILTIGSSEEYGM 132 (321)
T ss_dssp HCCSEEEECCSCCC-----------HHHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CC------CEEEEEEEGGGTBS
T ss_pred cCCCEEEEcCcccc-----------hhhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CC------CeEEEEccHHhcCC
Confidence 37999999999642 12344567889999999999999999 5542 12 29999999754321
Q ss_pred C----------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 186 D----------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 186 ~----------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
. .+.++...|+.+|++.+.+++.++.++ |++++ .+.|+.+
T Consensus 133 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~-ilrp~~v 182 (321)
T 2pk3_A 133 ILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDII-HTRTFNH 182 (321)
T ss_dssp CCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEE-EEEECEE
T ss_pred CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEE-EEEeCcc
Confidence 1 022456689999999999999998764 78843 7777653
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-20 Score=157.04 Aligned_cols=175 Identities=14% Similarity=0.141 Sum_probs=129.1
Q ss_pred EEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCC--CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|||||+|+||++++++|++. |++ |++.+|+. ...+.+.+... +.++.++.+|++|.+++.+++++.
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~----- 72 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGNLESLSDISE--SNRYNFEHADICDSAEITRIFEQY----- 72 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCe--EEEEecCCCCCchhhhhhhhc--CCCeEEEECCCCCHHHHHHHHhhc-----
Confidence 5999999999999999999998 786 88888865 22333322211 457899999999999998888763
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc--c
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS--I 184 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~--~ 184 (231)
++|+||||||... .+.+.+++++.+++|+.++..+++++.+.|..-+. .....++||++||.... .
T Consensus 73 ~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~-~~~~~~~iv~~SS~~v~g~~ 140 (361)
T 1kew_A 73 QPDAVMHLAAESH-----------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGE-DKKNNFRFHHISTDEVYGDL 140 (361)
T ss_dssp CCSEEEECCSCCC-----------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH-HHHHHCEEEEEEEGGGGCCC
T ss_pred CCCEEEECCCCcC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccc-ccccCceEEEeCCHHHhCCC
Confidence 7999999999641 23455678889999999999999999988643210 00000289999986422 1
Q ss_pred C----------------CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 G----------------DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~----------------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+ ..+.++...|+.+|++.+.+++.++.++ |++ ++++.|+.|
T Consensus 141 ~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~-~~~vrp~~v 197 (361)
T 1kew_A 141 PHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLP-TIVTNCSNN 197 (361)
T ss_dssp CCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCC-EEEEEECEE
T ss_pred cccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCc-EEEEeecee
Confidence 1 0023455689999999999999998876 788 448888764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=158.48 Aligned_cols=173 Identities=15% Similarity=0.124 Sum_probs=128.1
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHh--cCCccEEEEeecCCCC-------ccchhhhhhcCCCceeEEEecCCChHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLE--KNDKGCVIATCRNPNG-------ATGLLDLKNRFPERLDVLQLDLTVEST 93 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~--~G~~~~vi~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dls~~~~ 93 (231)
.+++++|++|||||+|+||++++++|++ .|++ |++++|+... .+.+.......+.++.++.+|+++.++
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 82 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAK--VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLD 82 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSE--EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHH
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCe--EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHH
Confidence 3567899999999999999999999999 8997 8888886651 112222222234578999999999998
Q ss_pred HHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceE
Q 026924 94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 173 (231)
+.++ ...++|+|||+||... .+.+++++.+++|+.++..+++++... + .+
T Consensus 83 ~~~~------~~~~~D~vih~A~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-------~~ 132 (362)
T 3sxp_A 83 LRRL------EKLHFDYLFHQAAVSD-------------TTMLNQELVMKTNYQAFLNLLEIARSK----K-------AK 132 (362)
T ss_dssp HHHH------TTSCCSEEEECCCCCG-------------GGCCCHHHHHHHHTHHHHHHHHHHHHT----T-------CE
T ss_pred HHHh------hccCCCEEEECCccCC-------------ccccCHHHHHHHHHHHHHHHHHHHHHc----C-------Cc
Confidence 8776 2358999999999542 144667889999999999999998432 2 26
Q ss_pred EEEeccCccccCCC--------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 174 VANLSARVGSIGDN--------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 174 iv~iss~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+|++||.. .++.. +......|+.+|.+.+.+++.++.++.-..+|..+.+-||.
T Consensus 133 ~V~~SS~~-vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~ 194 (362)
T 3sxp_A 133 VIYASSAG-VYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPRE 194 (362)
T ss_dssp EEEEEEGG-GGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTC
T ss_pred EEEeCcHH-HhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCC
Confidence 99999843 33321 11223469999999999999999886555666545666664
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=155.67 Aligned_cols=167 Identities=18% Similarity=0.135 Sum_probs=125.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++++|||||+|+||++++++|+++| ++ |++.+|+.. ..+.+.+.. .+.++.++.+|++|.+++.+++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~---- 73 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWE--VINIDKLGYGSNPANLKDLE--DDPRYTFVKGDVADYELVKELV---- 73 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCE--EEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHH----
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCE--EEEEecCcccCchhHHhhhc--cCCceEEEEcCCCCHHHHHHHh----
Confidence 35679999999999999999999997 65 888888642 222222211 1457889999999999888776
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|+|||+||... .+.+.+++++.+++|+.++..+++++.+. . . . +++|++||...
T Consensus 74 ---~~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~-~-~------~~iv~~SS~~v 130 (336)
T 2hun_A 74 ---RKVDGVVHLAAESH-----------VDRSISSPEIFLHSNVIGTYTLLESIRRE-N-P-E------VRFVHVSTDEV 130 (336)
T ss_dssp ---HTCSEEEECCCCCC-----------HHHHHHCTHHHHHHHHHHHHHHHHHHHHH-C-T-T------SEEEEEEEGGG
T ss_pred ---hCCCEEEECCCCcC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C-C-C------cEEEEeccHHH
Confidence 37899999999641 23445677889999999999999999876 1 1 1 29999999642
Q ss_pred ccCCC---------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 183 SIGDN---------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 183 ~~~~~---------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
. +.. +.++...|+.+|.+.+.+++.++.++ |++ ++.+.|+.+
T Consensus 131 y-g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~-~~ilrp~~v 181 (336)
T 2hun_A 131 Y-GDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLN-ASITRCTNN 181 (336)
T ss_dssp G-CCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCE-EEEEEECEE
T ss_pred H-CCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCC-EEEEeeeee
Confidence 2 211 23445689999999999999998775 788 448888764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-20 Score=155.36 Aligned_cols=169 Identities=13% Similarity=0.127 Sum_probs=128.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+|+||++++++|++.|++ |++++|+.. ..+.....+.. ..++.++.+|++|.+++.++++.. +
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 73 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----M 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCE--EEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence 47999999999999999999999997 888888542 22222222222 246889999999999998888762 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC--
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-- 185 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~-- 185 (231)
+|+|||+||... .+.+.+++++.+++|+.++..+++++.+...+ +++|++||......
T Consensus 74 ~d~vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---------~~iv~~SS~~v~g~~~ 133 (347)
T 1orr_A 74 PDSCFHLAGQVA-----------MTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---------CNIIYSSTNKVYGDLE 133 (347)
T ss_dssp CSEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---------CEEEEEEEGGGGTTCT
T ss_pred CCEEEECCcccC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---------ceEEEeccHHHhCCCC
Confidence 999999999542 23445677889999999999999999876532 28999999653211
Q ss_pred ----------------------CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 186 ----------------------DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 186 ----------------------~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
..+.++...|+.+|++.+.+++.++.++ |++ ++++.||.+
T Consensus 134 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~-~~ilrp~~v 195 (347)
T 1orr_A 134 QYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLN-TVVFRHSSM 195 (347)
T ss_dssp TSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCE-EEEEEECCE
T ss_pred cCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCc-EEEEccCce
Confidence 0112345689999999999999998875 788 448888875
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=162.29 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=129.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-cCCCceeEE-EecCCChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVL-QLDLTVESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~~~~~v~~~-~~Dls~~~~v~~~~~~~ 101 (231)
..+++|++|||||+|+||++++++|+++|++ |++++|+....+.+.+... ..+.++.++ .+|+++.+++.++++
T Consensus 7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 82 (342)
T 1y1p_A 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-- 82 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred cCCCCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--
Confidence 3467899999999999999999999999996 8888897655444433322 123578888 899999988766553
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++|+|||+|+... .. +++++.+++|+.++..+++++.+. .+. +++|++||..
T Consensus 83 -----~~d~vih~A~~~~-------~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~------~~iv~~SS~~ 134 (342)
T 1y1p_A 83 -----GAAGVAHIASVVS-------FS-------NKYDEVVTPAIGGTLNALRAAAAT---PSV------KRFVLTSSTV 134 (342)
T ss_dssp -----TCSEEEECCCCCS-------CC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTC------CEEEEECCGG
T ss_pred -----CCCEEEEeCCCCC-------CC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCC------cEEEEeccHH
Confidence 6899999999652 11 245678999999999999998752 122 2999999976
Q ss_pred cccCCCC----------------------------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 182 GSIGDNR----------------------------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 182 ~~~~~~~----------------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
......+ ..+...|+.+|.+.+.+++.++.+++. +++ ++++.|+.+
T Consensus 135 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~-~~~~rp~~v 208 (342)
T 1y1p_A 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFT-LNAVLPNYT 208 (342)
T ss_dssp GTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSE-EEEEEESEE
T ss_pred HhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-Cce-EEEEcCCce
Confidence 5422100 112357999999999999999998876 888 558888764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-20 Score=154.84 Aligned_cols=173 Identities=14% Similarity=0.081 Sum_probs=128.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcC-------CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKN-------DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G-------~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
..++++++|||||+|+||++++++|++.| ++ |++++|+...... ..+.++.++.+|++|++++.+
T Consensus 10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~--V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~ 81 (342)
T 2hrz_A 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEK--FTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEK 81 (342)
T ss_dssp SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEE--EEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHH
T ss_pred CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCce--EEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHH
Confidence 35788999999999999999999999999 65 8888887654322 124578899999999998887
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcC-CCCcccCceEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVA 175 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~~~~~~~~~iv 175 (231)
+++ +++|+|||+||... ..+.+++++.+++|+.++..+++++.+...+. +. +++|
T Consensus 82 ~~~------~~~d~vih~A~~~~------------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~------~~iv 137 (342)
T 2hrz_A 82 LVE------ARPDVIFHLAAIVS------------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYK------PRVV 137 (342)
T ss_dssp HHH------TCCSEEEECCCCCH------------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCC------CEEE
T ss_pred HHh------cCCCEEEECCccCc------------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCC------cEEE
Confidence 765 47999999999541 23456788999999999999999987754221 11 2999
Q ss_pred EeccCccccCCCC--------CCCccchhhhHHHHHHHHHHhhhhc--cccCCceeeecc--CCCC
Q 026924 176 NLSARVGSIGDNR--------LGGWHSYRASKAALNHDKICVSGVW--SKEGSSYMYSVA--SRHC 229 (231)
Q Consensus 176 ~iss~~~~~~~~~--------~~~~~~y~~sK~a~~~~~~~l~~e~--~~~gi~~~~~v~--pg~~ 229 (231)
++||........+ ..+...|+.+|.+.+.+++.++.+. ....+| ++.+. ||.+
T Consensus 138 ~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir-~~~v~g~pg~~ 202 (342)
T 2hrz_A 138 FTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIR-LPTICIRPGKP 202 (342)
T ss_dssp EEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEE-ECEETTCCSSC
T ss_pred EeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEE-eeeEEecCCCC
Confidence 9999854322100 1145689999999999999988764 223455 33444 7754
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-20 Score=157.27 Aligned_cols=170 Identities=15% Similarity=0.120 Sum_probs=124.7
Q ss_pred CeEEEEecCCCchhHHHHHHHH-hcCCccEEEEeecCCCCc---------cchhhhhhcC-----CCc---eeEEEecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGA---------TGLLDLKNRF-----PER---LDVLQLDLT 89 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~-~~G~~~~vi~~~r~~~~~---------~~~~~~~~~~-----~~~---v~~~~~Dls 89 (231)
++++|||||+|+||++++++|+ +.|++ |++++|+.... +.+.+.++.. ..+ +.++.+|++
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS--VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE--EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCE--EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 4589999999999999999999 99996 88888875442 2232212221 124 889999999
Q ss_pred ChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCccc
Q 026924 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER 169 (231)
Q Consensus 90 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~ 169 (231)
+.+++.+++++ ++++|+||||||... . ..+.+++++.+++|+.++..+++++... +.+
T Consensus 80 d~~~~~~~~~~----~~~~d~vih~A~~~~-------~----~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~--- 137 (397)
T 1gy8_A 80 NEDFLNGVFTR----HGPIDAVVHMCAFLA-------V----GESVRDPLKYYDNNVVGILRLLQAMLLH----KCD--- 137 (397)
T ss_dssp CHHHHHHHHHH----SCCCCEEEECCCCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCC---
T ss_pred CHHHHHHHHHh----cCCCCEEEECCCccC-------c----CcchhhHHHHHHHHhHHHHHHHHHHHHh----CCC---
Confidence 99998877764 466999999999642 1 1244667889999999999999987532 222
Q ss_pred CceEEEEeccCccccCCCC----------------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 170 DVAVVANLSARVGSIGDNR----------------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 170 ~~~~iv~iss~~~~~~~~~----------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+||++||.. .++... ......|+.+|++.+.+++.++.++ |++ ++++.|+.+
T Consensus 138 ---~iv~~SS~~-v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~-~~ilRp~~v 205 (397)
T 1gy8_A 138 ---KIIFSSSAA-IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIK-GICLRYFNA 205 (397)
T ss_dssp ---EEEEEEEGG-GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCE-EEEEEECEE
T ss_pred ---EEEEECCHH-HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCc-EEEEeccce
Confidence 899999954 333211 1125689999999999999998876 788 447777643
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=154.66 Aligned_cols=177 Identities=14% Similarity=0.073 Sum_probs=126.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc-----cchhhhhhcCCC-ceeEEEecCCChHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----TGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-----~~~~~~~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
|++|||||+|+||++++++|++.|++ |++++|+.... +.+.......+. ++.++.+|++|.+++.++++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYE--VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCE--EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-
Confidence 68999999999999999999999996 88888876542 222111111123 7889999999999999888775
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|||+||... ...+.+++++.+++|+.++..+++++.+...+++.+ +++|++||...
T Consensus 106 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~-----~~~v~~SS~~v 165 (381)
T 1n7h_A 106 ----KPDEVYNLAAQSH-----------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-----VKYYQAGSSEM 165 (381)
T ss_dssp ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCC-----CEEEEEEEGGG
T ss_pred ----CCCEEEECCcccC-----------ccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCc-----cEEEEeCcHHH
Confidence 7899999999642 124456778899999999999999999876542211 39999999753
Q ss_pred ccCC-------CCCCCccchhhhHHHHHHHHHHhhhhcccc--CCceeeeccCCC
Q 026924 183 SIGD-------NRLGGWHSYRASKAALNHDKICVSGVWSKE--GSSYMYSVASRH 228 (231)
Q Consensus 183 ~~~~-------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~--gi~~~~~v~pg~ 228 (231)
.... .+..+...|+.+|.+.+.+++.++.+++-. -.+..|.+.||.
T Consensus 166 yg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~ 220 (381)
T 1n7h_A 166 FGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 220 (381)
T ss_dssp GTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred hCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCC
Confidence 2110 123345689999999999999998775321 112345566664
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=157.44 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=126.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc-----------------cchhhhhhcCCCceeEEEec
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----------------TGLLDLKNRFPERLDVLQLD 87 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-----------------~~~~~~~~~~~~~v~~~~~D 87 (231)
..+++++|||||+|.||++++++|+++|++ |++++|+.... +.+.......+.++.++.+|
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D 85 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYE--VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD 85 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCe--EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence 346789999999999999999999999997 88887753221 01111111124578899999
Q ss_pred CCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCc
Q 026924 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI 167 (231)
Q Consensus 88 ls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~ 167 (231)
+++.+++.++++.. ++|+|||+||... ......+.+.+.+.+++|+.++..+++++.+.-. +
T Consensus 86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~--------~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--~--- 147 (404)
T 1i24_A 86 ICDFEFLAESFKSF-----EPDSVVHFGEQRS--------APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--E--- 147 (404)
T ss_dssp TTSHHHHHHHHHHH-----CCSEEEECCSCCC--------HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--T---
T ss_pred CCCHHHHHHHHhcc-----CCCEEEECCCCCC--------ccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC--C---
Confidence 99999998888765 6999999999642 1112224556677899999999999999865421 0
Q ss_pred ccCceEEEEeccCccccCC----------------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeecc
Q 026924 168 ERDVAVVANLSARVGSIGD----------------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVA 225 (231)
Q Consensus 168 ~~~~~~iv~iss~~~~~~~----------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~ 225 (231)
.++|++||... ++. .+......|+.+|.+.+.+++.++.++ |++ ++++.
T Consensus 148 ----~~~V~~SS~~v-yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~-~~ivr 218 (404)
T 1i24_A 148 ----CHLVKLGTMGE-YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIR-ATDLN 218 (404)
T ss_dssp ----CEEEEECCGGG-GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCE-EEEEE
T ss_pred ----cEEEEeCcHHH-hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCe-EEEEe
Confidence 28999999643 221 123345679999999999999988766 788 44888
Q ss_pred CCCC
Q 026924 226 SRHC 229 (231)
Q Consensus 226 pg~~ 229 (231)
||.|
T Consensus 219 p~~v 222 (404)
T 1i24_A 219 QGVV 222 (404)
T ss_dssp ECEE
T ss_pred ccee
Confidence 8754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=149.04 Aligned_cols=169 Identities=15% Similarity=0.078 Sum_probs=119.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++|++|||||+|+||++++++|+++ |++ |++.+|+....+.+ +.++.++.+|++|.+++.++++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~--V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~----- 68 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFV--AKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ----- 68 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCE--EEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT-----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcE--EEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc-----
Confidence 5789999999999999999999999 786 88889875432221 3567889999999988887764
Q ss_pred cCCccEEEEccccCCCCCC--CCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 105 YGSLNLLINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
.+|+||||+|....... ........+...+++++.+++|+.++..+++++.+. +.+ ++|++||..+
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~iv~~SS~~~ 136 (253)
T 1xq6_A 69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVK------HIVVVGSMGG 136 (253)
T ss_dssp --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCS------EEEEEEETTT
T ss_pred --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCC------EEEEEcCccC
Confidence 48999999996521000 000001123344556678899999999999987643 222 9999999876
Q ss_pred ccCCCCCCCc--cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 183 SIGDNRLGGW--HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 183 ~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.....+...+ ..|..+|.+++.+++. .|++ ++++.||.+
T Consensus 137 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~-~~~vrpg~v 177 (253)
T 1xq6_A 137 TNPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTP-YTIIRAGGL 177 (253)
T ss_dssp TCTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSC-EEEEEECEE
T ss_pred CCCCCccccccchhHHHHHHHHHHHHHh-------CCCc-eEEEeccee
Confidence 5432212111 2366799999998863 6899 559999875
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=152.95 Aligned_cols=172 Identities=12% Similarity=0.079 Sum_probs=127.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc-chhhhhhcC----CCceeEEEecCCChHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRF----PERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~-~~~~~~~~~----~~~v~~~~~Dls~~~~v~~~~ 98 (231)
++++++++|||||+|+||++++++|++.|++ |++++|+..... .+....+.. +.++.++.+|++|.+++.+++
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 100 (352)
T 1sb8_A 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQK--VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC 100 (352)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred cCccCCeEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence 4567889999999999999999999999996 888888764322 222221111 257889999999998887766
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+ ++|+|||+||... ...+.+++++.+++|+.++..+++++.+. +. +++|++|
T Consensus 101 ~-------~~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~v~~S 152 (352)
T 1sb8_A 101 A-------GVDYVLHQAALGS-----------VPRSINDPITSNATNIDGFLNMLIAARDA----KV------QSFTYAA 152 (352)
T ss_dssp T-------TCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TC------SEEEEEE
T ss_pred c-------CCCEEEECCcccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEec
Confidence 5 6899999999642 11244667889999999999999998653 22 2899999
Q ss_pred cCccccCCC--------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 179 ARVGSIGDN--------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 179 s~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
|........ +......|+.+|.+.+.+++.++.++ |++++ .+.||.+
T Consensus 153 S~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~-ilRp~~v 207 (352)
T 1sb8_A 153 SSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTI-GLRYFNV 207 (352)
T ss_dssp EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCE-EEEECCE
T ss_pred cHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEE-EEEECce
Confidence 976542211 01235689999999999999988775 77743 7777654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=150.82 Aligned_cols=167 Identities=17% Similarity=0.131 Sum_probs=121.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC------ccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------ATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~------~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+|++|||||+|+||++++++|++.|++ |++++|+... .+. +.++....+.++.++.+|+++.+++.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL--PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC--EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence 578999999999999999999999997 8888876543 222 2222211245788999999999998888775
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
. ++|+|||+||... . ..+.+++++.+++|+.++..+++++.. .+.+ ++|++||.
T Consensus 80 ~-----~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~iv~~SS~ 133 (348)
T 1ek6_A 80 Y-----SFMAVIHFAGLKA-------V----GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVK------NLVFSSSA 133 (348)
T ss_dssp C-----CEEEEEECCSCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC------EEEEEEEG
T ss_pred c-----CCCEEEECCCCcC-------c----cchhhchHHHHHHHHHHHHHHHHHHHH----hCCC------EEEEECcH
Confidence 2 7999999999642 1 123456778999999999999997643 2222 99999996
Q ss_pred ccccCC----------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccC
Q 026924 181 VGSIGD----------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVAS 226 (231)
Q Consensus 181 ~~~~~~----------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~p 226 (231)
... +. ...|....|+.+|.+.+.+++.++.+ ..+++++ .+-|
T Consensus 134 ~~~-g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~-~lR~ 185 (348)
T 1ek6_A 134 TVY-GNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAV-LLRY 185 (348)
T ss_dssp GGG-CSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEE-EEEE
T ss_pred HHh-CCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceE-EEee
Confidence 543 21 11123568999999999999999877 2346533 4443
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=149.67 Aligned_cols=162 Identities=20% Similarity=0.227 Sum_probs=121.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|+++|++ |++++|....... ....++.++.+|+++++++.+++++. ++|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 68 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLE--VAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPT 68 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCE--EEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCE--EEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence 6999999999999999999999997 7777875432211 11245778899999999998887753 689
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC---
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--- 186 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--- 186 (231)
++||+|+... ...+.+++++.+++|+.++..+++++... +.+ ++|++||..+.++.
T Consensus 69 ~vi~~a~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~a~~~~----~~~------~iv~~SS~~~~~g~~~~ 127 (311)
T 2p5y_A 69 HVSHQAAQAS-----------VKVSVEDPVLDFEVNLLGGLNLLEACRQY----GVE------KLVFASTGGAIYGEVPE 127 (311)
T ss_dssp EEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS------EEEEEEEHHHHHCCCCT
T ss_pred EEEECccccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCC------EEEEeCCChhhcCCCCC
Confidence 9999998542 12445677889999999999999988642 222 99999997332221
Q ss_pred -------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 -------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 -------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+..+...|+.+|++.+.+++.++.++ |++ ++.+.|+.+
T Consensus 128 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~-~~~lrp~~v 173 (311)
T 2p5y_A 128 GERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLK-WVSLRYGNV 173 (311)
T ss_dssp TCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCC-EEEEEECEE
T ss_pred CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCC-EEEEeeccc
Confidence 011245689999999999999988764 788 447777643
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.5e-19 Score=148.79 Aligned_cols=171 Identities=12% Similarity=0.125 Sum_probs=121.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++++|||||+|+||++++++|++.|+.+.|+..+|..... +.+.... ...++.++.+|++|.+++.++++..
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~- 97 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ--DHPNYYFVKGEIQNGELLEHVIKER- 97 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc--cCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence 4578999999999999999999999999554577777764222 1122211 1358999999999999999888874
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|||+|+... ...+.+++++.+++|+.++..+++++... +. .++|++||...
T Consensus 98 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~------~~~v~~SS~~v 152 (346)
T 4egb_A 98 ----DVQVIVNFAAESH-----------VDRSIENPIPFYDTNVIGTVTLLELVKKY----PH------IKLVQVSTDEV 152 (346)
T ss_dssp ----TCCEEEECCCCC--------------------CHHHHHHTHHHHHHHHHHHHS----TT------SEEEEEEEGGG
T ss_pred ----CCCEEEECCcccc-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHhc----CC------CEEEEeCchHH
Confidence 6899999999652 11244566788999999999999998654 22 28999998643
Q ss_pred ccCCC----------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 183 SIGDN----------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 183 ~~~~~----------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
. +.. +......|+.+|.+.+.+++.++.+. |++++ .+.|+.
T Consensus 153 y-~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~-ilRp~~ 203 (346)
T 4egb_A 153 Y-GSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVI-VTRCSN 203 (346)
T ss_dssp G-CCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEE-EEEECE
T ss_pred h-CCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEE-EEeecc
Confidence 2 211 11234679999999999999988764 77743 666664
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=152.82 Aligned_cols=173 Identities=13% Similarity=0.087 Sum_probs=127.8
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-CC----CceeEEEecCCChHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP----ERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~~----~~v~~~~~Dls~~~~v~~ 96 (231)
..+.+++|++|||||+|+||++++++|+++|++ |++++|+............. .. .++.++.+|++|.+++.+
T Consensus 19 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 96 (351)
T 3ruf_A 19 QQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQV--VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ 96 (351)
T ss_dssp HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH
T ss_pred hhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 345667899999999999999999999999996 88889976654432222221 11 578999999999988876
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++ ++|+|||+|+... ...+.+++++.+++|+.++..+++++... +. .++|+
T Consensus 97 ~~~-------~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~------~~~v~ 148 (351)
T 3ruf_A 97 VMK-------GVDHVLHQAALGS-----------VPRSIVDPITTNATNITGFLNILHAAKNA----QV------QSFTY 148 (351)
T ss_dssp HTT-------TCSEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TC------SEEEE
T ss_pred Hhc-------CCCEEEECCccCC-----------cchhhhCHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEE
Confidence 665 6899999999642 13445567788999999999999998654 22 28999
Q ss_pred eccCccccCCC--------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 177 LSARVGSIGDN--------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 177 iss~~~~~~~~--------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+||........ +......|+.+|.+.+.+++.++.+. |++++ .+-|+.
T Consensus 149 ~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~-ilRp~~ 204 (351)
T 3ruf_A 149 AASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTI-GLRYFN 204 (351)
T ss_dssp EEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCE-EEEECS
T ss_pred EecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEE-EEeeCc
Confidence 99875432110 11224679999999999999988775 67733 666654
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-19 Score=149.88 Aligned_cols=160 Identities=14% Similarity=0.073 Sum_probs=118.3
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
..+.+.++|++|||||+|+||++++++|+++|++ |++++|+... .++.++.+|++|.+++.++++
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~- 76 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRT--VRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM- 76 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCC--EEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCCE--EEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh-
Confidence 3445678999999999999999999999999997 8888887653 467889999999988877665
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
++|+|||+|+... .+.+.+++.+++|+.++..+++++.. .+.+ ++|++||.
T Consensus 77 ------~~d~vih~A~~~~-------------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~------~~V~~SS~ 127 (347)
T 4id9_A 77 ------GVSAVLHLGAFMS-------------WAPADRDRMFAVNVEGTRRLLDAASA----AGVR------RFVFASSG 127 (347)
T ss_dssp ------TCSEEEECCCCCC-------------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCS------EEEEEEEG
T ss_pred ------CCCEEEECCcccC-------------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEEECCH
Confidence 6899999998642 12234478899999999999999864 2222 99999985
Q ss_pred ccccCC-----------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 181 VGSIGD-----------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 181 ~~~~~~-----------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.. ++. .+......|+.+|.+.+.+++.++.+. |++++ .+.|+.+
T Consensus 128 ~v-yg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~-ilRp~~v 182 (347)
T 4id9_A 128 EV-YPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETV-ILRFSHT 182 (347)
T ss_dssp GG-TTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEE-EEEECEE
T ss_pred HH-hCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceE-EEccceE
Confidence 42 221 123345689999999999999988774 78744 7777654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=151.60 Aligned_cols=170 Identities=16% Similarity=0.100 Sum_probs=119.1
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|++|||||+|+||++++++|+++|++ |+++.|+....+.+....... ..++.++.+|++|.+++.++++
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK---- 76 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence 46789999999999999999999999997 877788765433322211110 1368889999999988876664
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|+|||+|+... .. ..+..++.+++|+.++.++++++.+... . ++||++||..+.
T Consensus 77 ---~~d~Vih~A~~~~----------~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~---~------~riV~~SS~~~~ 132 (337)
T 2c29_D 77 ---GCTGVFHVATPMD----------FE--SKDPENEVIKPTIEGMLGIMKSCAAAKT---V------RRLVFTSSAGTV 132 (337)
T ss_dssp ---TCSEEEECCCCCC----------SS--CSSHHHHTHHHHHHHHHHHHHHHHHHSC---C------CEEEEECCGGGT
T ss_pred ---CCCEEEEeccccC----------CC--CCChHHHHHHHHHHHHHHHHHHHHhCCC---c------cEEEEeeeHhhc
Confidence 4799999998431 11 1122346899999999999999876531 1 299999998755
Q ss_pred cCCCCC-------------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRL-------------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~-------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+.... +....|+.+|.+.+.+++.++.+ .|++ ++++.|+.|
T Consensus 133 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~-~~~lrp~~v 193 (337)
T 2c29_D 133 NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNID-FITIIPTLV 193 (337)
T ss_dssp SCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCC-EEEEEECEE
T ss_pred ccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCc-EEEEeCCce
Confidence 431100 12236999999999998776643 4888 448888765
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=150.74 Aligned_cols=166 Identities=13% Similarity=-0.047 Sum_probs=124.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+.+++++|||||+|+||++++++|++.|++ |++++|+........ ..++.++.+|++|.+++.++++
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~----- 92 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHY--VIASDWKKNEHMTED------MFCDEFHLVDLRVMENCLKVTE----- 92 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCSSSCGG------GTCSEEEECCTTSHHHHHHHHT-----
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCe--EEEEECCCccchhhc------cCCceEEECCCCCHHHHHHHhC-----
Confidence 346789999999999999999999999996 888889865533221 2467889999999988877664
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++|+|||+|+... . ...+.+++++.+++|+.++..+++++... +. .++|++||.....
T Consensus 93 --~~d~Vih~A~~~~-------~---~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~------~~~V~~SS~~v~~ 150 (379)
T 2c5a_A 93 --GVDHVFNLAADMG-------G---MGFIQSNHSVIMYNNTMISFNMIEAARIN----GI------KRFFYASSACIYP 150 (379)
T ss_dssp --TCSEEEECCCCCC-------C---HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TC------SEEEEEEEGGGSC
T ss_pred --CCCEEEECceecC-------c---ccccccCHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEEeehheeC
Confidence 6899999999642 1 11224567788999999999999998643 22 2899999965322
Q ss_pred CCC---------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GDN---------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~~---------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
... +......|+.+|.+.+.+++.++.+. |++ ++.+.||.+
T Consensus 151 ~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~-~~ilrp~~v 206 (379)
T 2c5a_A 151 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIE-CRIGRFHNI 206 (379)
T ss_dssp GGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCE-EEEEEECCE
T ss_pred CCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCC-EEEEEeCce
Confidence 100 22345689999999999999988764 788 448888764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=148.33 Aligned_cols=160 Identities=15% Similarity=0.093 Sum_probs=119.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhhhc----CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~~~----~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
|++|||||+|+||++++++|++.|++ |++++|+.... +.+...... .+.++.++.+|++|.+++.++++..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYE--VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-
Confidence 68999999999999999999999996 88888876542 112211110 2357889999999999999888775
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+||||||... ...+.+++++.+++|+.++..+++++.+...+. . ++||++||...
T Consensus 102 ----~~d~vih~A~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~-~------~~iv~~SS~~~ 159 (375)
T 1t2a_A 102 ----KPTEIYNLGAQSH-----------VKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-S------VKFYQASTSEL 159 (375)
T ss_dssp ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT-T------CEEEEEEEGGG
T ss_pred ----CCCEEEECCCccc-----------ccccccCHHHHHHHHHHHHHHHHHHHHHhCCCc-c------ceEEEecchhh
Confidence 6899999999642 123456678899999999999999998765421 1 29999999764
Q ss_pred ccCCC--------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 183 SIGDN--------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 183 ~~~~~--------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
..... +..+...|+.+|++.+.+++.++.++
T Consensus 160 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 198 (375)
T 1t2a_A 160 YGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 198 (375)
T ss_dssp TCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 32110 12245689999999999999988765
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=146.28 Aligned_cols=164 Identities=17% Similarity=0.118 Sum_probs=121.6
Q ss_pred EEEEecCCCchhHHHHHHHHhc---C---CccEEEEeecCCCC--ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK---N---DKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~---G---~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++|||||+|+||++++++|+++ | ++ |++.+|+... .+.+.... .+.++.++.+|++|.+++.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~--- 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADE--VIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLAREL--- 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSE--EEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHT---
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceE--EEEEECCCccCchhhhhhcc--cCCCeEEEEcCCCCHHHHHHHh---
Confidence 6999999999999999999996 7 75 8888886532 22222211 1357889999999998877665
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++|+|||+||... .+.+.+++++.+++|+.++..+++++.+... +++|++||..
T Consensus 75 ----~~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~----------~~~v~~SS~~ 129 (337)
T 1r6d_A 75 ----RGVDAIVHFAAESH-----------VDRSIAGASVFTETNVQGTQTLLQCAVDAGV----------GRVVHVSTNQ 129 (337)
T ss_dssp ----TTCCEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC----------CEEEEEEEGG
T ss_pred ----cCCCEEEECCCccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHcCC----------CEEEEecchH
Confidence 47999999999542 1234456778999999999999999977532 2999999864
Q ss_pred cccCC--------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 182 GSIGD--------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 182 ~~~~~--------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
..-.. .+..+...|+.+|.+.+.+++.++.++ |++ ++.+.|+.+
T Consensus 130 vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~-~~ilrp~~v 181 (337)
T 1r6d_A 130 VYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLD-VRITRCCNN 181 (337)
T ss_dssp GGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCC-EEEEEECEE
T ss_pred HhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCC-EEEEEeeee
Confidence 32110 123445689999999999999988765 677 337777653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=145.61 Aligned_cols=159 Identities=13% Similarity=0.014 Sum_probs=117.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.++++|||||+|+||++++++|++.|++ |++++|+...... ..+... .+.++.++.+|++|.+++.++++..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~---- 85 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYR--VHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA---- 85 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc----
Confidence 4688999999999999999999999996 8888887654322 111111 1347889999999999999888775
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
++|+|||+||... ...+.+++++.+++|+.++..+++++.+.-. . .++|++||......
T Consensus 86 -~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~---~------~~~v~~SS~~v~g~ 144 (335)
T 1rpn_A 86 -QPQEVYNLAAQSF-----------VGASWNQPVTTGVVDGLGVTHLLEAIRQFSP---E------TRFYQASTSEMFGL 144 (335)
T ss_dssp -CCSEEEECCSCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT---T------SEEEEEEEGGGGCS
T ss_pred -CCCEEEECccccc-----------hhhhhhChHHHHHHHHHHHHHHHHHHHHhCC---C------CeEEEEeCHHHhCC
Confidence 7899999999542 1223455678899999999999999865411 1 29999999653321
Q ss_pred C--------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 186 D--------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 186 ~--------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
. .+......|+.+|.+.+.+++.++.++
T Consensus 145 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 180 (335)
T 1rpn_A 145 IQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF 180 (335)
T ss_dssp CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc
Confidence 1 011224579999999999999988765
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.3e-19 Score=149.35 Aligned_cols=160 Identities=15% Similarity=0.075 Sum_probs=115.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhhhc---CCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++|||||+|+||++++++|+++|++ |++++|+.... +.+...... .+.++.++.+|++|.+++.++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYE--VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-- 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc--
Confidence 68999999999999999999999996 88888876432 112221111 1357888999999999999888875
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||||||... . ..+.+++++.+++|+.++..+++++.+...++ . +++|++||....
T Consensus 78 ---~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~------~~iv~~SS~~v~ 136 (372)
T 1db3_A 78 ---QPDEVYNLGAMSH-------V----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK-K------TRFYQASTSELY 136 (372)
T ss_dssp ---CCSEEEECCCCCT-------T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT-T------CEEEEEEEGGGG
T ss_pred ---CCCEEEECCcccC-------c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCC-C------cEEEEeCChhhh
Confidence 7899999999642 1 12345567889999999999999998765431 1 299999996533
Q ss_pred cCC--------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 184 IGD--------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 184 ~~~--------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
... .+..+...|+.+|++.+.+++.++.++
T Consensus 137 g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 174 (372)
T 1db3_A 137 GLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY 174 (372)
T ss_dssp TTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 211 112335689999999999999998775
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=141.18 Aligned_cols=140 Identities=11% Similarity=-0.010 Sum_probs=109.2
Q ss_pred eEEEEecCCCchhHHHHHHHH-hcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~-~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
|++|||||+|+||++++++|+ +.|++ |++.+|+++ ..+.+. ..+.++.++.+|++|++++.++++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~--V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~------- 72 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMH--ITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT------- 72 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCE--EEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCce--EEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------
Confidence 689999999999999999999 89996 888899865 444332 124678999999999998887765
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+||||+|.. |+. .+.+++.+++.+.+ +||++||..+..+
T Consensus 73 ~~d~vv~~ag~~--------------------------n~~-----~~~~~~~~~~~~~~------~iv~iSs~~~~~~- 114 (221)
T 3r6d_A 73 NAEVVFVGAMES--------------------------GSD-----MASIVKALSRXNIR------RVIGVSMAGLSGE- 114 (221)
T ss_dssp TCSEEEESCCCC--------------------------HHH-----HHHHHHHHHHTTCC------EEEEEEETTTTSC-
T ss_pred CCCEEEEcCCCC--------------------------Chh-----HHHHHHHHHhcCCC------eEEEEeeceecCC-
Confidence 679999999831 221 56777777776654 9999999876543
Q ss_pred CCCCCcc----------chhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 NRLGGWH----------SYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ~~~~~~~----------~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.++.. .|+.+|.+++.+++. .|++ +++|.||.+
T Consensus 115 --~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~-~~~vrpg~v 157 (221)
T 3r6d_A 115 --FPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLN-YTILRLTWL 157 (221)
T ss_dssp --SCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSE-EEEEEECEE
T ss_pred --CCcccccccccccccHHHHHHHHHHHHHHh-------CCCC-EEEEechhh
Confidence 33333 799999999988763 6899 569999976
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=150.15 Aligned_cols=169 Identities=11% Similarity=0.063 Sum_probs=123.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..++++++|||||+|+||++++++|+++| ++ |++++|+......... ...++.++.+|++|++++.++++
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~~~l~----~~~~v~~~~~Dl~d~~~l~~~~~--- 98 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQ--VHVVDNLLSAEKINVP----DHPAVRFSETSITDDALLASLQD--- 98 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSE--EEEECCCTTCCGGGSC----CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCce--EEEEECCCCCchhhcc----CCCceEEEECCCCCHHHHHHHhh---
Confidence 35678999999999999999999999999 86 8888887654322111 13578899999999987765543
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|||+|+... ...+.+++++.+++|+.++..+++++... .+. .++|++||...
T Consensus 99 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~------~~~V~~SS~~v 154 (377)
T 2q1s_A 99 ----EYDYVFHLATYHG-----------NQSSIHDPLADHENNTLTTLKLYERLKHF---KRL------KKVVYSAAGCS 154 (377)
T ss_dssp ----CCSEEEECCCCSC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHTTC---SSC------CEEEEEEEC--
T ss_pred ----CCCEEEECCCccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCC------CeEEEeCCHHH
Confidence 7899999999642 12344567889999999999999988532 022 28999999653
Q ss_pred cc----------CCC---CC-CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 183 SI----------GDN---RL-GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 183 ~~----------~~~---~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.- ... +. .....|+.+|.+.+.+++.++.+. |++ ++.+.|+.+
T Consensus 155 yg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~-~~ilRp~~v 211 (377)
T 2q1s_A 155 IAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLP-TVRARFQNV 211 (377)
T ss_dssp ------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCC-EEEEEECCE
T ss_pred cCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCC-EEEEeeccE
Confidence 21 100 12 345689999999999999988765 788 447777754
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=140.98 Aligned_cols=144 Identities=12% Similarity=0.125 Sum_probs=114.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|+||++++++|++.|++ |++.+|+.+..+.. .++.++.+|++| .+++.++++ ++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~ 64 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQ--IYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GM 64 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCE--EEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CC
Confidence 6999999999999999999999996 88899987554432 578999999999 877765553 68
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||+|... .+.+++|+.++..+++++.. .+.+ ++|++||..+..+
T Consensus 65 d~vi~~ag~~~-------------------~~~~~~n~~~~~~l~~a~~~----~~~~------~iv~~SS~~~~~~--- 112 (219)
T 3dqp_A 65 DAIINVSGSGG-------------------KSLLKVDLYGAVKLMQAAEK----AEVK------RFILLSTIFSLQP--- 112 (219)
T ss_dssp SEEEECCCCTT-------------------SSCCCCCCHHHHHHHHHHHH----TTCC------EEEEECCTTTTCG---
T ss_pred CEEEECCcCCC-------------------CCcEeEeHHHHHHHHHHHHH----hCCC------EEEEECcccccCC---
Confidence 99999999652 13688999999999998843 3322 9999999876543
Q ss_pred CCC-------ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 189 LGG-------WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 189 ~~~-------~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+. ...|+.+|.+.+.+++ ...|++ ++.+.||.+
T Consensus 113 ~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~-~~ilrp~~v 153 (219)
T 3dqp_A 113 EKWIGAGFDALKDYYIAKHFADLYLT------KETNLD-YTIIQPGAL 153 (219)
T ss_dssp GGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCE-EEEEEECSE
T ss_pred CcccccccccccHHHHHHHHHHHHHH------hccCCc-EEEEeCceE
Confidence 333 5689999999999986 467899 448999875
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=143.56 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=121.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|+||++++++|++.|++ |++++|+...... ....++.++.+|+++.+++.+++++ .++
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~ 68 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLS--VVVVDNLQTGHED------AITEGAKFYNGDLRDKAFLRDVFTQ-----ENI 68 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGG------GSCTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCCCcCchh------hcCCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence 47999999999999999999999996 8888886544321 1123688899999999998888765 379
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||+|+... ...+.+++++.+++|+.++..+++++... +. .++|++||.... +..
T Consensus 69 d~vih~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~v~~Ss~~~~-~~~~ 126 (330)
T 2c20_A 69 EAVMHFAADSL-----------VGVSMEKPLQYYNNNVYGALCLLEVMDEF----KV------DKFIFSSTAATY-GEVD 126 (330)
T ss_dssp EEEEECCCCCC-----------HHHHHHSHHHHHHHHHHHHHHHHHHHHHT----TC------CEEEEECCGGGG-CSCS
T ss_pred CEEEECCcccC-----------ccccccCHHHHHHHHhHHHHHHHHHHHHc----CC------CEEEEeCCceee-CCCC
Confidence 99999999642 11244567889999999999999987532 22 289999986533 211
Q ss_pred --------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 188 --------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 188 --------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+......|+.+|.+.+.+++.++.++ |++++ .+.|+.
T Consensus 127 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~-ilrp~~ 171 (330)
T 2c20_A 127 VDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYK-IFRYFN 171 (330)
T ss_dssp SSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEE-EEECSE
T ss_pred CCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEE-EEecCc
Confidence 12235689999999999999988765 77744 676653
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=144.84 Aligned_cols=154 Identities=16% Similarity=0.088 Sum_probs=119.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|+||++++++|+++|++ |++++|+..... ..++.++.+|++|++++.++++ .+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~ 64 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHE--VRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DC 64 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEE--EEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCE--EEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence 68999999999999999999999986 999999865321 1356888999999988877664 58
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+||||||.. +.+++++.+++|+.++..+++++.+. +. ++||++||........
T Consensus 65 d~vi~~a~~~---------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~iv~~SS~~~~~~~~~ 119 (267)
T 3ay3_A 65 DGIIHLGGVS---------------VERPWNDILQANIIGAYNLYEAARNL----GK------PRIVFASSNHTIGYYPR 119 (267)
T ss_dssp SEEEECCSCC---------------SCCCHHHHHHHTHHHHHHHHHHHHHT----TC------CEEEEEEEGGGSTTSBT
T ss_pred CEEEECCcCC---------------CCCCHHHHHHHHHHHHHHHHHHHHHh----CC------CEEEEeCCHHHhCCCCC
Confidence 9999999853 12345778999999999999998642 22 2999999976432210
Q ss_pred --------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 188 --------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 188 --------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+......|+.+|++.+.+++.++. +.|++ ++.+.||.+
T Consensus 120 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~gi~-~~~lrp~~v 165 (267)
T 3ay3_A 120 TTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH---KFDIE-TLNIRIGSC 165 (267)
T ss_dssp TSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH---TTCCC-EEEEEECBC
T ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH---HcCCC-EEEEeceee
Confidence 111346899999999999998764 45898 458889876
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=144.86 Aligned_cols=160 Identities=17% Similarity=0.082 Sum_probs=114.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|+||++++++|+++|++ |++++|....... +.......+.++.++.+|+++++++.++++.. ++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 74 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE--EEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CC
Confidence 6999999999999999999999997 7777765433222 22111112456888999999999988887652 69
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC--
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-- 186 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-- 186 (231)
|+||||||... . ....+++++.+++|+.++..+++++.. .+.+ ++|++||.......
T Consensus 75 D~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~iv~~SS~~~~g~~~~ 133 (338)
T 1udb_A 75 DTVIHFAGLKA-------V----GESVQKPLEYYDNNVNGTLRLISAMRA----ANVK------NFIFSSSATVYGDNPK 133 (338)
T ss_dssp SEEEECCSCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCC------EEEEEEEGGGGCSCCS
T ss_pred CEEEECCccCc-------c----ccchhcHHHHHHHHHHHHHHHHHHHHh----cCCC------eEEEEccHHHhCCCCC
Confidence 99999999642 1 112345567899999999999987643 2222 89999996532110
Q ss_pred ------CC-CCCccchhhhHHHHHHHHHHhhhhccccCCc
Q 026924 187 ------NR-LGGWHSYRASKAALNHDKICVSGVWSKEGSS 219 (231)
Q Consensus 187 ------~~-~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~ 219 (231)
.+ .+....|+.+|++.+.+++.++.+. .|++
T Consensus 134 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~ 171 (338)
T 1udb_A 134 IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWS 171 (338)
T ss_dssp SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCE
T ss_pred CCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCc
Confidence 01 1235689999999999999998774 2455
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=146.13 Aligned_cols=158 Identities=11% Similarity=0.016 Sum_probs=114.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||+|+||++++++|+++|++ |++++|+....+.+.+ .++.++.+|++|.+++.++++ ++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~-------~~ 78 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHD--LVLIHRPSSQIQRLAY------LEPECRVAEMLDHAGLERALR-------GL 78 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECTTSCGGGGGG------GCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCE--EEEEecChHhhhhhcc------CCeEEEEecCCCHHHHHHHHc-------CC
Confidence 48999999999999999999999996 8888998765443321 267889999999988776654 58
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+|||+|+... .+.+++++.+++|+.++..+++++.+. +. +++|++||.........
T Consensus 79 d~vih~a~~~~-------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~v~~SS~~~~~~~~~ 135 (342)
T 2x4g_A 79 DGVIFSAGYYP-------------SRPRRWQEEVASALGQTNPFYAACLQA----RV------PRILYVGSAYAMPRHPQ 135 (342)
T ss_dssp SEEEEC-------------------------CHHHHHHHHHHHHHHHHHHH----TC------SCEEEECCGGGSCCCTT
T ss_pred CEEEECCccCc-------------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CC------CeEEEECCHHhhCcCCC
Confidence 99999999541 123567788999999999999998764 22 28999999765422110
Q ss_pred ---------CCC----ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 189 ---------LGG----WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 189 ---------~~~----~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
... ...|+.+|.+.+.+++.++. + |++ ++.+.||.+
T Consensus 136 ~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~-~~ilrp~~v 184 (342)
T 2x4g_A 136 GLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLP-VVIGIPGMV 184 (342)
T ss_dssp SSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCC-EEEEEECEE
T ss_pred CCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCc-EEEEeCCce
Confidence 011 56899999999999999875 3 788 448888764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-18 Score=143.59 Aligned_cols=151 Identities=16% Similarity=0.115 Sum_probs=111.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..++++++|||||+|+||++++++|++.|++ |++++|+........ ... .++.++.+|++|.+++.++++.
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~l---~~~-~~~~~~~~Dl~d~~~~~~~~~~--- 87 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDK--VVGIDNFATGRREHL---KDH-PNLTFVEGSIADHALVNQLIGD--- 87 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGS---CCC-TTEEEEECCTTCHHHHHHHHHH---
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEECCCccchhhH---hhc-CCceEEEEeCCCHHHHHHHHhc---
Confidence 4567899999999999999999999999996 888888754322211 111 4688899999999999888875
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||||... .. +.++++ +++|+.++..+++++.+. +.+ +||++||....
T Consensus 88 --~~~D~vih~A~~~~-------~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~------~iV~~SS~~~~ 141 (333)
T 2q1w_A 88 --LQPDAVVHTAASYK-------DP-----DDWYND--TLTNCVGGSNVVQAAKKN----NVG------RFVYFQTALCY 141 (333)
T ss_dssp --HCCSEEEECCCCCS-------CT-----TCHHHH--HHHHTHHHHHHHHHHHHT----TCS------EEEEEEEGGGG
T ss_pred --cCCcEEEECceecC-------CC-----ccCChH--HHHHHHHHHHHHHHHHHh----CCC------EEEEECcHHHh
Confidence 27999999999652 11 223444 899999999999998763 222 99999996543
Q ss_pred cC----CCC-------CCCccchhhhHHHHHHHHHH-hh
Q 026924 184 IG----DNR-------LGGWHSYRASKAALNHDKIC-VS 210 (231)
Q Consensus 184 ~~----~~~-------~~~~~~y~~sK~a~~~~~~~-l~ 210 (231)
+ ... .|....|+.+|++.+.+++. ++
T Consensus 142 -g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~ 179 (333)
T 2q1w_A 142 -GVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL 179 (333)
T ss_dssp -CSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC
T ss_pred -CCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC
Confidence 3 110 12226899999999999998 76
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=145.87 Aligned_cols=164 Identities=15% Similarity=0.124 Sum_probs=122.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC-ChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls-~~~~v~~~~~~~ 101 (231)
.+++++++|||||+|.||++++++|++. |++ |++++|+....+.+.. ..++.++.+|++ +.+.+.++++
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~-- 90 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWE--VFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK-- 90 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSCE--EEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH--
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCCE--EEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc--
Confidence 3567889999999999999999999998 886 8888998766544322 257899999999 8888887776
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
++|+|||+|+... .....++.++.+++|+.++..+++++...- . ++|++||..
T Consensus 91 -----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-----~------~~v~~SS~~ 143 (372)
T 3slg_A 91 -----KCDVILPLVAIAT-----------PATYVKQPLRVFELDFEANLPIVRSAVKYG-----K------HLVFPSTSE 143 (372)
T ss_dssp -----HCSEEEECBCCCC-----------HHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-----C------EEEEECCGG
T ss_pred -----cCCEEEEcCcccc-----------HHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-----C------cEEEeCcHH
Confidence 4799999999652 112345566789999999999999886442 2 999999953
Q ss_pred cccCCCCC----------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 182 GSIGDNRL----------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 182 ~~~~~~~~----------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.++.... .....|+.+|.+.+.+++.++.+ |++++ .+-|+.+
T Consensus 144 -vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~-ilRp~~v 201 (372)
T 3slg_A 144 -VYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFT-LFRPFNW 201 (372)
T ss_dssp -GGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEE-EEEECSE
T ss_pred -HhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEE-EEccccc
Confidence 3332100 22337999999999999998876 77744 6666543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=144.83 Aligned_cols=163 Identities=12% Similarity=0.084 Sum_probs=122.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCC--ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
|++|||||+|+||++++++|+++ |++ |++++|+... .+.+.+. .+.++.++.+|++|.+++.++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----- 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVH--VTVLDKLTYAGNKANLEAI---LGDRVELVVGDIADAELVDKLAA----- 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCE--EEEEECCCTTCCGGGTGGG---CSSSEEEEECCTTCHHHHHHHHT-----
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCE--EEEEeCCCCCCChhHHhhh---ccCCeEEEECCCCCHHHHHHHhh-----
Confidence 58999999999999999999998 786 8888886532 1222211 13578899999999988877665
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|+|||+||... .+.+.+++++.+++|+.++..+++++.+. + .++|++||....-
T Consensus 75 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-------~~~v~~SS~~vyg 130 (348)
T 1oc2_A 75 --KADAIVHYAAESH-----------NDNSLNDPSPFIHTNFIGTYTLLEAARKY----D-------IRFHHVSTDEVYG 130 (348)
T ss_dssp --TCSEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGGC
T ss_pred --cCCEEEECCcccC-----------ccchhhCHHHHHHHHHHHHHHHHHHHHHh----C-------CeEEEecccceeC
Confidence 3599999999642 23445667889999999999999999765 1 2899999865221
Q ss_pred CC--------------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GD--------------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~--------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.. .+.+....|+.+|.+.+.+++.++.++ |++ ++.+.|+.+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~-~~ilrp~~v 191 (348)
T 1oc2_A 131 DLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVK-ATISNCSNN 191 (348)
T ss_dssp CBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCE-EEEEEECCE
T ss_pred CCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCC-EEEEeecee
Confidence 10 023345689999999999999998775 788 448888764
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=138.18 Aligned_cols=154 Identities=14% Similarity=0.000 Sum_probs=117.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||+|+||++++++|+++|++ |++++|+....+.+ ..++.++.+|++|.+++.++++ .+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~ 68 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFE--VTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GA 68 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCE--EEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCE--EEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence 68999999999999999999999996 99999986654432 2578899999999998877765 58
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||++|... . ..+.+++|+.++..+++++... +.+ ++|++||.....+..
T Consensus 69 d~vi~~a~~~~-------~----------~~~~~~~n~~~~~~l~~~~~~~----~~~------~~v~~Ss~~~~~~~~~ 121 (227)
T 3dhn_A 69 DAVISAFNPGW-------N----------NPDIYDETIKVYLTIIDGVKKA----GVN------RFLMVGGAGSLFIAPG 121 (227)
T ss_dssp SEEEECCCC-----------------------CCSHHHHHHHHHHHHHHHT----TCS------EEEEECCSTTSEEETT
T ss_pred CEEEEeCcCCC-------C----------ChhHHHHHHHHHHHHHHHHHHh----CCC------EEEEeCChhhccCCCC
Confidence 99999998531 0 1126889999999999987543 222 899999976554311
Q ss_pred ------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 188 ------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 188 ------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+......|+.+|.+.+.+++.++.+ .|++ .+.+.||.+
T Consensus 122 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~-~~ilrp~~v 165 (227)
T 3dhn_A 122 LRLMDSGEVPENILPGVKALGEFYLNFLMKE---KEID-WVFFSPAAD 165 (227)
T ss_dssp EEGGGTTCSCGGGHHHHHHHHHHHHHTGGGC---CSSE-EEEEECCSE
T ss_pred CccccCCcchHHHHHHHHHHHHHHHHHHhhc---cCcc-EEEEeCCcc
Confidence 1223568999999999999988764 4888 448888875
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.8e-19 Score=145.96 Aligned_cols=168 Identities=15% Similarity=0.109 Sum_probs=113.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-CCCCccchhhh--hhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDL--KNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-~~~~~~~~~~~--~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
||++|||||+|+||++++++|+++|++ |++..| +....+..... ......++.++.+|++|.+++.++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS--VNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE----- 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE--EEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-----
Confidence 578999999999999999999999997 777777 54322221111 11001357888999999998877764
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|+|||+|+.. ... ..+.+++.+++|+.++.++++++.+.. +. ++||++||..+..
T Consensus 74 --~~d~vih~A~~~----------~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~------~~iV~~SS~~~~~ 130 (322)
T 2p4h_X 74 --GCVGIFHTASPI----------DFA--VSEPEEIVTKRTVDGALGILKACVNSK---TV------KRFIYTSSGSAVS 130 (322)
T ss_dssp --TCSEEEECCCCC--------------------CHHHHHHHHHHHHHHHHHTTCS---SC------CEEEEEEEGGGTS
T ss_pred --CCCEEEEcCCcc----------cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC---Cc------cEEEEeccHHHcc
Confidence 479999999621 111 111235689999999999999987652 12 2999999987543
Q ss_pred CCCCC-------------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 GDNRL-------------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 ~~~~~-------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+.... |....|+.+|.+.+.+++.++. ..|++ ++++.|+.+
T Consensus 131 ~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~---~~gi~-~~~lrp~~v 190 (322)
T 2p4h_X 131 FNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE---QNGID-VVTLILPFI 190 (322)
T ss_dssp CSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHH---HTTCC-EEEEEECEE
T ss_pred cCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHH---hcCCc-EEEEcCCce
Confidence 31100 0111699999988887766543 25898 558888865
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=146.54 Aligned_cols=159 Identities=16% Similarity=0.141 Sum_probs=119.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||+|+||++++++|+++|++ |++++|+........ ..++.++.+|++|.+ +.++++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~-------~- 63 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYE--VVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK-------G- 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCE--EEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhcC-------C-
Confidence 47999999999999999999999997 888888765544321 357888999999987 543332 3
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC--
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-- 186 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-- 186 (231)
|+|||+|+... ...+.+++++.+++|+.++..+++++... +. +++|++||....-..
T Consensus 64 d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~iv~~SS~~vyg~~~~ 122 (312)
T 3ko8_A 64 DVVFHFAANPE-----------VRLSTTEPIVHFNENVVATFNVLEWARQT----GV------RTVVFASSSTVYGDADV 122 (312)
T ss_dssp SEEEECCSSCS-----------SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TC------CEEEEEEEGGGGCSCSS
T ss_pred CEEEECCCCCC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEeCcHHHhCCCCC
Confidence 99999999532 23455667788999999999999998543 22 289999996543211
Q ss_pred ------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 ------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+..+...|+.+|.+.+.+++.++.++ |++ ++.+.|+.+
T Consensus 123 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~-~~~lrp~~v 167 (312)
T 3ko8_A 123 IPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVR-CLAVRYANV 167 (312)
T ss_dssp SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCE-EEEEEECEE
T ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCC-EEEEeeccc
Confidence 123345689999999999999998876 788 447777654
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=143.17 Aligned_cols=159 Identities=15% Similarity=0.091 Sum_probs=116.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|+||++++++|++.|. .|++..++....+.+ ...+.++.+|+++ +++.++++ ++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~--~v~~~~~~~~~~~~~-------~~~~~~~~~Dl~~-~~~~~~~~-------~~ 64 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNE--IVVIDNLSSGNEEFV-------NEAARLVKADLAA-DDIKDYLK-------GA 64 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSC--EEEECCCSSCCGGGS-------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC--EEEEEcCCCCChhhc-------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence 4799999999999999999999994 355554444332221 3568889999998 77766654 68
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC---
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--- 185 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~--- 185 (231)
|+|||+|+... ...+.+++++.+++|+.++..+++++... +.+ ++|++||....-.
T Consensus 65 d~vih~a~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~------~iv~~SS~~vyg~~~~ 123 (313)
T 3ehe_A 65 EEVWHIAANPD-----------VRIGAENPDEIYRNNVLATYRLLEAMRKA----GVS------RIVFTSTSTVYGEAKV 123 (313)
T ss_dssp SEEEECCCCCC-----------CC-CCCCHHHHHHHHHHHHHHHHHHHHHH----TCC------EEEEECCGGGGCSCSS
T ss_pred CEEEECCCCCC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------eEEEeCchHHhCcCCC
Confidence 99999998532 23445677889999999999999986532 222 9999999654311
Q ss_pred -----CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 186 -----DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 186 -----~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
..+..+...|+.+|.+.+.+++.++.++ |++++ .+-|+.+
T Consensus 124 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~-ilRp~~v 168 (313)
T 3ehe_A 124 IPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAW-IYRFANV 168 (313)
T ss_dssp SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEE-EEECSCE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEE-EEeeccc
Confidence 0123445689999999999999998876 77743 7777654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=141.43 Aligned_cols=160 Identities=15% Similarity=0.064 Sum_probs=119.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|++|||||+|+||++++++|+++ |++ |++++|+....+ + . .++.++.+|++|.+++.+++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~-~---~----~~~~~~~~D~~d~~~~~~~~~~~---- 67 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTEN--VIASDIRKLNTD-V---V----NSGPFEVVNALDFNQIEHLVEVH---- 67 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGG--EEEEESCCCSCH-H---H----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCE--EEEEcCCCcccc-c---c----CCCceEEecCCCHHHHHHHHhhc----
Confidence 467999999999999999999998 887 888888765522 1 1 24678899999999998887754
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
++|+|||+|+... . ...+++++.+++|+.++..+++++.+. +. .++|++||......
T Consensus 68 -~~d~vih~a~~~~---------~---~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~------~~~v~~SS~~~~~~ 124 (312)
T 2yy7_A 68 -KITDIYLMAALLS---------A---TAEKNPAFAWDLNMNSLFHVLNLAKAK----KI------KKIFWPSSIAVFGP 124 (312)
T ss_dssp -TCCEEEECCCCCH---------H---HHHHCHHHHHHHHHHHHHHHHHHHHTT----SC------SEEECCEEGGGCCT
T ss_pred -CCCEEEECCccCC---------C---chhhChHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEeccHHHhCC
Confidence 6899999998541 1 123567788999999999999988652 22 28999998754322
Q ss_pred CC---------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 186 DN---------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 186 ~~---------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
.. +......|+.+|.+.+.+++.++.+. |++++ .+.|+.
T Consensus 125 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~-~lrp~~ 172 (312)
T 2yy7_A 125 TTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVR-SIRYPG 172 (312)
T ss_dssp TSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEE-CEEECE
T ss_pred CCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEE-EEeCCe
Confidence 10 11235679999999999999987654 67733 666653
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=151.48 Aligned_cols=162 Identities=17% Similarity=0.082 Sum_probs=118.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc---chhhhhh---------cCCCceeEEEecCCChHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKN---------RFPERLDVLQLDLTVEST 93 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~---~~~~~~~---------~~~~~v~~~~~Dls~~~~ 93 (231)
.++|++|||||+|+||++++++|++.|++ |++++|+....+ .+.+.+. ..+.++.++.+|++++++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHR--IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEE--EEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCE--EEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 45789999999999999999999999996 888899887332 2222211 124689999999999887
Q ss_pred HHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceE
Q 026924 94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 173 (231)
+. .++++|+|||||+... ..+++++.+++|+.++..+++++.+ .. .+
T Consensus 145 l~--------~~~~~d~Vih~A~~~~--------------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~--------~~ 191 (427)
T 4f6c_A 145 VV--------LPENMDTIIHAGARTD--------------HFGDDDEFEKVNVQGTVDVIRLAQQ---HH--------AR 191 (427)
T ss_dssp CC--------CSSCCSEEEECCCCC---------------------CHHHHHHHHHHHHHHHHHH---TT--------CE
T ss_pred CC--------CcCCCCEEEECCcccC--------------CCCCHHHHHHHHHHHHHHHHHHHHh---cC--------Cc
Confidence 76 4578999999999642 1246778899999999999999876 11 28
Q ss_pred EEEeccCccccCCC-----------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 174 VANLSARVGSIGDN-----------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 174 iv~iss~~~~~~~~-----------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+|++||... +.. +......|+.+|++.+.+++.++ +.|++ ++++.||.|
T Consensus 192 ~v~~SS~~~--G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~-~~ivRpg~v 257 (427)
T 4f6c_A 192 LIYVSTISV--GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV----NNGLD-GRIVRVGNL 257 (427)
T ss_dssp EEEEEEGGG--GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHH----HTTCC-EEEEEECCE
T ss_pred EEEECchHh--CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHH----HcCCC-EEEEeCCee
Confidence 999999776 210 02255689999999999999865 36898 558888865
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-18 Score=131.45 Aligned_cols=151 Identities=14% Similarity=0.119 Sum_probs=111.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++++|||||+|+||++++++|+++|++ |++++|+....+.+ ...++.++.+|++|++++.++++ .
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~ 67 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYE--VTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------G 67 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCe--EEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------C
Confidence 478999999999999999999999986 88889986544321 13578899999999988877654 4
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+|||++|... . . + ..++|+.++..+++++.+. +. +++|++||........
T Consensus 68 ~d~vi~~a~~~~-------~---~-----~---~~~~n~~~~~~~~~~~~~~----~~------~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 68 QDAVIVLLGTRN-------D---L-----S---PTTVMSEGARNIVAAMKAH----GV------DKVVACTSAFLLWDPT 119 (206)
T ss_dssp CSEEEECCCCTT-------C---C-----S---CCCHHHHHHHHHHHHHHHH----TC------CEEEEECCGGGTSCTT
T ss_pred CCEEEECccCCC-------C---C-----C---ccchHHHHHHHHHHHHHHh----CC------CeEEEEeeeeeccCcc
Confidence 799999999652 1 0 1 1247888888888887643 22 2899999975432211
Q ss_pred CCC-CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 188 RLG-GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 188 ~~~-~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
..+ ....|+.+|.+++.+++ ..|++ ++.+.||.+
T Consensus 120 ~~~~~~~~y~~~K~~~e~~~~-------~~~i~-~~~lrp~~~ 154 (206)
T 1hdo_A 120 KVPPRLQAVTDDHIRMHKVLR-------ESGLK-YVAVMPPHI 154 (206)
T ss_dssp CSCGGGHHHHHHHHHHHHHHH-------HTCSE-EEEECCSEE
T ss_pred cccccchhHHHHHHHHHHHHH-------hCCCC-EEEEeCCcc
Confidence 011 45689999999999884 36888 458889876
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.3e-19 Score=139.01 Aligned_cols=146 Identities=19% Similarity=0.079 Sum_probs=113.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCC--ccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~--~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++++|||||+|+||++++++|+++|+ + |++++|+... + ..++.++.+|+++++++.+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~--V~~~~r~~~~-~---------~~~~~~~~~D~~~~~~~~~~~------ 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAK--VIAPARKALA-E---------HPRLDNPVGPLAELLPQLDGS------ 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCE--EECCBSSCCC-C---------CTTEECCBSCHHHHGGGCCSC------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCe--EEEEeCCCcc-c---------CCCceEEeccccCHHHHHHhh------
Confidence 468999999999999999999999998 6 8888998754 1 246777889998887665443
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||||+|... .+.+++++.+++|+.++..+++++.+. +. .++|++||....
T Consensus 66 ---~d~vi~~a~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~------~~~v~~Ss~~~~- 118 (215)
T 2a35_A 66 ---IDTAFCCLGTTI-------------KEAGSEEAFRAVDFDLPLAVGKRALEM----GA------RHYLVVSALGAD- 118 (215)
T ss_dssp ---CSEEEECCCCCH-------------HHHSSHHHHHHHHTHHHHHHHHHHHHT----TC------CEEEEECCTTCC-
T ss_pred ---hcEEEECeeecc-------------ccCCCHHHHHHhhHHHHHHHHHHHHHc----CC------CEEEEECCcccC-
Confidence 899999999541 123467788999999999999987643 22 289999997654
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCc-eeeeccCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSS-YMYSVASRHC 229 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~-~~~~v~pg~~ 229 (231)
+ ++...|+.+|.+.+.+++.+ |++ ++ .+.||.+
T Consensus 119 ~----~~~~~y~~sK~~~e~~~~~~-------~~~~~~-~vrp~~v 152 (215)
T 2a35_A 119 A----KSSIFYNRVKGELEQALQEQ-------GWPQLT-IARPSLL 152 (215)
T ss_dssp T----TCSSHHHHHHHHHHHHHTTS-------CCSEEE-EEECCSE
T ss_pred C----CCccHHHHHHHHHHHHHHHc-------CCCeEE-EEeCcee
Confidence 2 23458999999999998763 676 55 7888865
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.6e-18 Score=154.19 Aligned_cols=167 Identities=17% Similarity=0.178 Sum_probs=118.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch-hhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+.+++|++|||||+|+||++++++|+++|++ |++++|+....... .......+.++.++.+|+++.+++.+++++.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~- 83 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYD--CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY- 83 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence 4567899999999999999999999999996 88888876543322 1111112457889999999999988887653
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|||+||... .. ...+..++.+++|+.++..+++++... +. +++|++||...
T Consensus 84 ----~~D~Vih~A~~~~-------~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~------~~iV~~SS~~v 138 (699)
T 1z45_A 84 ----KIDSVIHFAGLKA-------VG----ESTQIPLRYYHNNILGTVVLLELMQQY----NV------SKFVFSSSATV 138 (699)
T ss_dssp ----CCCEEEECCSCCC-------HH----HHHHSHHHHHHHHHHHHHHHHHHHHHH----TC------CEEEEEEEGGG
T ss_pred ----CCCEEEECCcccC-------cC----ccccCHHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEECcHHH
Confidence 7999999999642 11 122334567999999999998877532 22 28999999653
Q ss_pred ccCC-------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCce
Q 026924 183 SIGD-------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSY 220 (231)
Q Consensus 183 ~~~~-------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~ 220 (231)
. +. .+......|+.+|++.+.+++.++.+. +.|+++
T Consensus 139 y-g~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~ 187 (699)
T 1z45_A 139 Y-GDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKF 187 (699)
T ss_dssp G-CCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEE
T ss_pred h-CCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcE
Confidence 2 21 011234689999999999999988765 346663
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-19 Score=147.69 Aligned_cols=167 Identities=16% Similarity=0.113 Sum_probs=114.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh--hhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~--~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|++|||||+|+||++++++|+++|++ |+++.|+.+..+.... ... ...++.++.+|++|.+++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA--VNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA------ 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE--EEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT------
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE--EEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc------
Confidence 689999999999999999999999997 7777787654332211 111 13468889999999988776654
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
.+|+|||+|+... .. ..+..++.+++|+.++.++++++.+.. +. .+||++||..+..+
T Consensus 80 -~~D~Vih~A~~~~----------~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v------~r~V~~SS~~~~~~ 137 (338)
T 2rh8_A 80 -GCDFVFHVATPVH----------FA--SEDPENDMIKPAIQGVVNVMKACTRAK---SV------KRVILTSSAAAVTI 137 (338)
T ss_dssp -TCSEEEEESSCCC----------C-----------CHHHHHHHHHHHHHHHHCT---TC------CEEEEECCHHHHHH
T ss_pred -CCCEEEEeCCccC----------CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---Cc------CEEEEEecHHHeec
Confidence 4799999998431 11 111224589999999999999987643 11 29999999763221
Q ss_pred -----------CC---------CC-CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 186 -----------DN---------RL-GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 186 -----------~~---------~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+. +. +....|+.+|.+.+.+++.++.+ .|++ ++++.|+.|
T Consensus 138 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~-~~~lrp~~v 198 (338)
T 2rh8_A 138 NQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNID-LITVIPTLM 198 (338)
T ss_dssp HHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCC-EEEEEECEE
T ss_pred CCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCc-EEEEeCCce
Confidence 00 00 01115999999999988876643 4888 448888765
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=137.48 Aligned_cols=160 Identities=14% Similarity=0.106 Sum_probs=116.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh-HHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~-~~v~~~~~~~~~~~g 106 (231)
+++|||||+|+||++++++|+++ |++ |++++|+....+.+.. ..++.++.+|+++. +.++++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~------- 66 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYE--VYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVK------- 66 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCE--EEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCE--EEEEeCCcchHHHhhc-----CCCeEEEeccccCcHHHHHhhcc-------
Confidence 47999999999999999999998 886 8888998755433211 34788999999984 45665554
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
.+|+|||+||... . ....+++++.+++|+.++..+++++.+. + . ++|++||.... +.
T Consensus 67 ~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~------~~v~~SS~~v~-g~ 123 (345)
T 2bll_A 67 KCDVVLPLVAIAT-------P----IEYTRNPLRVFELDFEENLRIIRYCVKY----R-K------RIIFPSTSEVY-GM 123 (345)
T ss_dssp HCSEEEECBCCCC-------H----HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C------EEEEECCGGGG-BT
T ss_pred CCCEEEEcccccC-------c----cchhcCHHHHHHHHHHHHHHHHHHHHHh----C-C------eEEEEecHHHc-CC
Confidence 4799999999642 1 1123456778999999999999988642 2 2 99999996532 21
Q ss_pred CCC----------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 NRL----------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ~~~----------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
... .....|+.+|.+.+.+++.++.+. |++++ .+.|+.+
T Consensus 124 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~-ilrp~~v 178 (345)
T 2bll_A 124 CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFT-LFRPFNW 178 (345)
T ss_dssp CCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEE-EEEECSE
T ss_pred CCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEE-EEcCCcc
Confidence 100 112379999999999999988764 78844 7777764
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=142.85 Aligned_cols=165 Identities=12% Similarity=0.078 Sum_probs=116.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++++++|||||+|+||++++++|++.| ++ |++++|+..... ... . .++. +.+|+++.+.++++++. .
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~-~~~-~----~~~~-~~~d~~~~~~~~~~~~~--~ 111 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGTK-FVN-L----VDLN-IADYMDKEDFLIQIMAG--E 111 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCC--EEEEECCSSGGG-GGG-T----TTSC-CSEEEEHHHHHHHHHTT--C
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcE--EEEEecCCCcch-hhc-c----cCce-EeeecCcHHHHHHHHhh--c
Confidence 4678899999999999999999999999 76 888888765421 111 1 1222 67899998888777653 2
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.++++|+|||+|+... . +.+++++.+++|+.++..+++++.+. + .++|++||....
T Consensus 112 ~~~~~d~Vih~A~~~~-------~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-------~r~V~~SS~~v~ 167 (357)
T 2x6t_A 112 EFGDVEAIFHEGACSS-------T------TEWDGKYMMDNNYQYSKELLHYCLER----E-------IPFLYASSAATY 167 (357)
T ss_dssp CCSSCCEEEECCSCCC-------T------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-------CCEEEEEEGGGG
T ss_pred ccCCCCEEEECCcccC-------C------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEcchHHh
Confidence 3568999999999652 1 23456788999999999999998752 1 178999987543
Q ss_pred cCCCCC---------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRL---------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~---------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
+.... .....|+.+|.+.+.+++.++.+. |++++ .+.|+.+
T Consensus 168 -g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~-ilRp~~v 217 (357)
T 2x6t_A 168 -GGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEA---NSQIV-GFRYFNV 217 (357)
T ss_dssp -CSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEE-EEEECEE
T ss_pred -CCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEE-EEecCeE
Confidence 32111 124589999999999999988764 77733 6776643
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-17 Score=137.44 Aligned_cols=163 Identities=13% Similarity=0.107 Sum_probs=115.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..++++++|||||+|+||++++++|++.|++ |++++|+...... +.... ...++.++.+|+.+..
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~---------- 88 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHE--VTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL---------- 88 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC----------
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCE--EEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh----------
Confidence 3567899999999999999999999999996 8888887543322 22111 1347889999998753
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+..+|+|||+|+... . ....+++++.+++|+.++..+++++.+. + .++|++||...
T Consensus 89 --~~~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v 144 (343)
T 2b69_A 89 --YIEVDQIYHLASPAS-------P----PNYMYNPIKTLKTNTIGTLNMLGLAKRV----G-------ARLLLASTSEV 144 (343)
T ss_dssp --CCCCSEEEECCSCCS-------H----HHHTTCHHHHHHHHHHHHHHHHHHHHHH----T-------CEEEEEEEGGG
T ss_pred --hcCCCEEEECccccC-------c----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-------CcEEEECcHHH
Confidence 457999999999642 1 1112345678999999999999988643 1 28999998643
Q ss_pred ccCC--------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 183 SIGD--------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 183 ~~~~--------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
. +. .+......|+.+|.+.+.+++.++.+. |+++ +.+.|+.+
T Consensus 145 ~-g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~ilrp~~v 200 (343)
T 2b69_A 145 Y-GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEV-RVARIFNT 200 (343)
T ss_dssp G-BSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCE-EEEEECCE
T ss_pred h-CCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcE-EEEEEcce
Confidence 2 21 122334579999999999999988654 7773 37777643
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=138.96 Aligned_cols=143 Identities=14% Similarity=0.097 Sum_probs=86.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||+|+||++++++|+++|++ |++++|+... + + ++.+|+++.+++.++++.. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~ 60 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWH--AVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----Q 60 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEC--------------------------------CHHHHHHH-----C
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCe--EEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----C
Confidence 578999999999999999999999996 8888886532 1 1 6789999999988888765 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD- 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~- 186 (231)
+|+|||+||... ...+.+++++.+++|+.++..+++++.+. + .++|++||.....+.
T Consensus 61 ~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v~~~~~ 118 (315)
T 2ydy_A 61 PHVIVHCAAERR-----------PDVVENQPDAASQLNVDASGNLAKEAAAV----G-------AFLIYISSDYVFDGTN 118 (315)
T ss_dssp CSEEEECC------------------------------CHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCSSS
T ss_pred CCEEEECCcccC-----------hhhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEchHHHcCCCC
Confidence 899999999642 11245677889999999999999998753 1 289999997653220
Q ss_pred ------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 ------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 ------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+..+...|+.+|.+.+.+++.++.++
T Consensus 119 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 151 (315)
T 2ydy_A 119 PPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA 151 (315)
T ss_dssp CSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe
Confidence 112345689999999999999986554
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-17 Score=135.33 Aligned_cols=151 Identities=22% Similarity=0.196 Sum_probs=113.9
Q ss_pred EEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++|||||+|+||++++++|++. |++ |++.+|+....+ ++.++.+|++|++++.+++++. +
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~ 62 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN--VIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----S 62 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG--EEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE--EEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----C
Confidence 3899999999999999999998 787 888888654321 4567899999999998887752 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+|||+|+... ....+++++.+++|+.++..+++++.+. +. .++|++||........
T Consensus 63 ~d~vih~a~~~~------------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~v~~SS~~~~~~~~ 120 (317)
T 3ajr_A 63 IDAIFHLAGILS------------AKGEKDPALAYKVNMNGTYNILEAAKQH----RV------EKVVIPSTIGVFGPET 120 (317)
T ss_dssp CCEEEECCCCCH------------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TC------CEEEEEEEGGGCCTTS
T ss_pred CcEEEECCcccC------------CccccChHHHhhhhhHHHHHHHHHHHHc----CC------CEEEEecCHHHhCCCC
Confidence 999999998541 1223566788999999999999988643 22 2899999976442210
Q ss_pred ---------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeec
Q 026924 188 ---------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSV 224 (231)
Q Consensus 188 ---------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v 224 (231)
+..+...|+.+|.+.+.+++.++.+ .|++++ .+
T Consensus 121 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~-~l 162 (317)
T 3ajr_A 121 PKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK---FGLDVR-SL 162 (317)
T ss_dssp CSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEE-EE
T ss_pred CCCCccccccCCCCchHHHHHHHHHHHHHHHHHh---cCCeEE-EE
Confidence 1123568999999999999988765 367733 44
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=134.92 Aligned_cols=152 Identities=13% Similarity=0.000 Sum_probs=113.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++++|||||+|+||++++++|++.|++ |++++|+. .+|++|.+++.+++++.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--v~~~~r~~--------------------~~D~~d~~~~~~~~~~~----- 54 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV--ELVLRTRD--------------------ELNLLDSRAVHDFFASE----- 54 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE--EEECCCTT--------------------TCCTTCHHHHHHHHHHH-----
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCe--EEEEecCc--------------------cCCccCHHHHHHHHHhc-----
Confidence 4578999999999999999999999996 77777652 27999999988887764
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+|||+|+... ......+++++.+++|+.++..+++++.+. +. .++|++||.......
T Consensus 55 ~~d~vih~a~~~~----------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~------~~~v~~SS~~vyg~~ 114 (321)
T 1e6u_A 55 RIDQVYLAAAKVG----------GIVANNTYPADFIYQNMMIESNIIHAAHQN----DV------NKLLFLGSSCIYPKL 114 (321)
T ss_dssp CCSEEEECCCCCC----------CHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TC------CEEEEECCGGGSCTT
T ss_pred CCCEEEEcCeecC----------CcchhhhCHHHHHHHHHHHHHHHHHHHHHh----CC------CeEEEEccHHHcCCC
Confidence 6899999998541 112334556788999999999999988653 22 289999996543110
Q ss_pred -------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 -------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 -------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+.|....|+.+|.+.+.+++.++.+. |++++ .+.|+.+
T Consensus 115 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~-ilrp~~v 166 (321)
T 1e6u_A 115 AKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYR-SVMPTNL 166 (321)
T ss_dssp CCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEE-EEEECEE
T ss_pred CCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEE-EEEeCCc
Confidence 111223489999999999999988654 77743 7766643
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-17 Score=144.02 Aligned_cols=167 Identities=14% Similarity=0.110 Sum_probs=119.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhc---CCccEEEEeecCCCCccchhhhhhc---------------CCCceeEEEe
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEK---NDKGCVIATCRNPNGATGLLDLKNR---------------FPERLDVLQL 86 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~---G~~~~vi~~~r~~~~~~~~~~~~~~---------------~~~~v~~~~~ 86 (231)
..++|++|||||+|+||++++++|++. |++ |++++|+....+....+.+. ...++.++.+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~--V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGR--LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE--EEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE--EEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 457899999999999999999999999 886 99999987654332222111 2358999999
Q ss_pred cCCC------hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhh
Q 026924 87 DLTV------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL 160 (231)
Q Consensus 87 Dls~------~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l 160 (231)
|+++ .+.+.++++ ++|+|||||+... . +.+++.+++|+.++..+++.+...
T Consensus 148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-------~--------~~~~~~~~~Nv~gt~~ll~aa~~~- 204 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-------A--------FPYHELFGPNVAGTAELIRIALTT- 204 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-------B--------SSCCEEHHHHHHHHHHHHHHHTSS-
T ss_pred ECCCcccCCCHHHHHHHHc-------CCCEEEECccccC-------C--------cCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9994 445555544 5799999999652 1 345678999999999999988642
Q ss_pred hcCCCCcccCceEEEEeccCccccCCCCC-------------------CCccchhhhHHHHHHHHHHhhhhccccCCcee
Q 026924 161 KVGGTGIERDVAVVANLSARVGSIGDNRL-------------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYM 221 (231)
Q Consensus 161 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~-------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~ 221 (231)
+. .++|++||........+. +....|+.+|.+.+.+++.++.+. |++ +
T Consensus 205 ---~~------~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~-~ 271 (478)
T 4dqv_A 205 ---KL------KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALP-V 271 (478)
T ss_dssp ---SC------CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCC-E
T ss_pred ---CC------CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCC-e
Confidence 22 289999996432111000 001339999999999999887654 788 4
Q ss_pred eeccCCCC
Q 026924 222 YSVASRHC 229 (231)
Q Consensus 222 ~~v~pg~~ 229 (231)
+.+.||.|
T Consensus 272 ~ivRpg~v 279 (478)
T 4dqv_A 272 AVFRCGMI 279 (478)
T ss_dssp EEEEECEE
T ss_pred EEEECcee
Confidence 47878764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=132.81 Aligned_cols=152 Identities=12% Similarity=0.044 Sum_probs=112.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++++|||||+|.||++++++|+++|++ |++++|+....+ + .++.++.+|++ .+++.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~-~--------~~~~~~~~Dl~-~~~~~~~~~-------~ 62 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNT--PIILTRSIGNKA-I--------NDYEYRVSDYT-LEDLINQLN-------D 62 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCCCCccc-C--------CceEEEEcccc-HHHHHHhhc-------C
Confidence 368999999999999999999999996 888899833322 1 16888999999 877766554 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+|||+|+... .. ++++.+++|+.++..+++++... +. .++|++||... ++..
T Consensus 63 ~d~Vih~a~~~~-------~~--------~~~~~~~~n~~~~~~ll~a~~~~----~~------~r~v~~SS~~v-yg~~ 116 (311)
T 3m2p_A 63 VDAVVHLAATRG-------SQ--------GKISEFHDNEILTQNLYDACYEN----NI------SNIVYASTISA-YSDE 116 (311)
T ss_dssp CSEEEECCCCCC-------SS--------SCGGGTHHHHHHHHHHHHHHHHT----TC------CEEEEEEEGGG-CCCG
T ss_pred CCEEEEccccCC-------CC--------ChHHHHHHHHHHHHHHHHHHHHc----CC------CEEEEEccHHH-hCCC
Confidence 899999999653 11 44567899999999999988543 22 28999998543 3211
Q ss_pred ---------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 188 ---------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 188 ---------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+......|+.+|.+.+.+++.++.+ .|++++ .+-|+.
T Consensus 117 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~-ilRp~~ 162 (311)
T 3m2p_A 117 TSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIK-NLRFAH 162 (311)
T ss_dssp GGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEE-EEEECE
T ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEE-EEeeCc
Confidence 1223468999999999999998774 477743 666654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.9e-17 Score=129.63 Aligned_cols=143 Identities=11% Similarity=0.020 Sum_probs=97.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
..|++|||||+|+||++++++|++.| ++ |++++|+.+..+.+. ..++.++.+|++|+++++++++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~--V~~~~R~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~------ 87 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIK--QTLFARQPAKIHKPY------PTNSQIIMGDVLNHAALKQAMQ------ 87 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEE--EEEEESSGGGSCSSC------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCce--EEEEEcChhhhcccc------cCCcEEEEecCCCHHHHHHHhc------
Confidence 45899999999999999999999999 75 888899876544321 3478899999999998887765
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
.+|+||||+|... + ....+.+++.+++.+.+ +||++||.....+
T Consensus 88 -~~D~vv~~a~~~~------------------~-----------~~~~~~~~~~~~~~~~~------~iV~iSS~~~~~~ 131 (236)
T 3qvo_A 88 -GQDIVYANLTGED------------------L-----------DIQANSVIAAMKACDVK------RLIFVLSLGIYDE 131 (236)
T ss_dssp -TCSEEEEECCSTT------------------H-----------HHHHHHHHHHHHHTTCC------EEEEECCCCC---
T ss_pred -CCCEEEEcCCCCc------------------h-----------hHHHHHHHHHHHHcCCC------EEEEEecceecCC
Confidence 5799999998421 0 02245666777776654 9999999775433
Q ss_pred CCCCCCc---------cchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 186 DNRLGGW---------HSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 186 ~~~~~~~---------~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.++. ..+...+... ..++.+.|++ +++|.||.+.
T Consensus 132 ---~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~gi~-~~~vrPg~i~ 174 (236)
T 3qvo_A 132 ---VPGKFVEWNNAVIGEPLKPFRRA-------ADAIEASGLE-YTILRPAWLT 174 (236)
T ss_dssp ----------------CGGGHHHHHH-------HHHHHTSCSE-EEEEEECEEE
T ss_pred ---CCcccccchhhcccchHHHHHHH-------HHHHHHCCCC-EEEEeCCccc
Confidence 1211 0111222221 1223467999 6699999763
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=130.18 Aligned_cols=135 Identities=20% Similarity=0.194 Sum_probs=106.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|++ |++ |++++|+.... . + +.+|+++++++.++++.. ++|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~--V~~~~r~~~~~--------~-~-----~~~Dl~~~~~~~~~~~~~-----~~d 59 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHE--VIKVYNSSEIQ--------G-G-----YKLDLTDFPRLEDFIIKK-----RPD 59 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSC--EEEEESSSCCT--------T-C-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred EEEEECCCChhHHHHHHHHhc-CCe--EEEecCCCcCC--------C-C-----ceeccCCHHHHHHHHHhc-----CCC
Confidence 599999999999999999995 886 88888876421 0 1 789999999999888775 799
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC--
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-- 187 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-- 187 (231)
+||||||... .+.+.+++++.+++|+.++..+++++.+. + +++|++||.....+..
T Consensus 60 ~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~iv~~SS~~~~~~~~~~ 117 (273)
T 2ggs_A 60 VIINAAAMTD-----------VDKCEIEKEKAYKINAEAVRHIVRAGKVI----D-------SYIVHISTDYVFDGEKGN 117 (273)
T ss_dssp EEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-------CEEEEEEEGGGSCSSSCS
T ss_pred EEEECCcccC-----------hhhhhhCHHHHHHHhHHHHHHHHHHHHHh----C-------CeEEEEecceeEcCCCCC
Confidence 9999999642 12445678899999999999999998642 2 2899999987543311
Q ss_pred -----CCCCccchhhhHHHHHHHHHH
Q 026924 188 -----RLGGWHSYRASKAALNHDKIC 208 (231)
Q Consensus 188 -----~~~~~~~y~~sK~a~~~~~~~ 208 (231)
+..+...|+.+|++.+.+++.
T Consensus 118 ~~e~~~~~~~~~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 118 YKEEDIPNPINYYGLSKLLGETFALQ 143 (273)
T ss_dssp BCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 011346899999999999987
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=144.16 Aligned_cols=164 Identities=13% Similarity=0.089 Sum_probs=120.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHH-HHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~~ 103 (231)
++++++|||||+|+||++++++|++. |++ |++++|+....+.+.. ..++.++.+|+++.++ +.++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~--V~~~~r~~~~~~~~~~-----~~~v~~v~~Dl~d~~~~~~~~~~---- 381 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYE--VYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVK---- 381 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEE--EEEEESCCTTTGGGTT-----CTTEEEEECCTTTCHHHHHHHHH----
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCE--EEEEEcCchhhhhhcc-----CCceEEEECCCCCcHHHHHHhhc----
Confidence 46889999999999999999999998 786 8888998765433211 3478899999998764 554443
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+|||+||... . ....+++++.+++|+.++..+++++.+. + + ++|++||....
T Consensus 382 ---~~D~Vih~Aa~~~-------~----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~------r~V~~SS~~vy 436 (660)
T 1z7e_A 382 ---KCDVVLPLVAIAT-------P----IEYTRNPLRVFELDFEENLRIIRYCVKY----R-K------RIIFPSTSEVY 436 (660)
T ss_dssp ---HCSEEEECCCCCC-------T----HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C------EEEEECCGGGG
T ss_pred ---CCCEEEECceecC-------c----cccccCHHHHHHhhhHHHHHHHHHHHHh----C-C------EEEEEecHHHc
Confidence 4799999999642 1 1123456788999999999999988653 2 2 99999996543
Q ss_pred cCCCCC---------------CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 184 IGDNRL---------------GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 184 ~~~~~~---------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
...... .....|+.+|.+.+.+++.++.+. |++ ++++.||.+
T Consensus 437 g~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~-~~ilRpg~v 493 (660)
T 1z7e_A 437 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQ-FTLFRPFNW 493 (660)
T ss_dssp BTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCC-EEEEEECSE
T ss_pred CCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCC-EEEECCCcc
Confidence 111000 112369999999999999988764 788 448888765
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-17 Score=128.25 Aligned_cols=150 Identities=9% Similarity=0.056 Sum_probs=106.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|+++|++ |++++|+....+.+ ...++.++.+|++|+++ +.+.++|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d 64 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHE--VLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVD 64 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCS
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCE--EEEEEecccccccc------cCCCceEEecccccccH---------hhcccCC
Confidence 5999999999999999999999996 88889976543322 13578899999999887 2346799
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
+||||+|... .. ...+.|+.++..+++++ ++.+ + ++|++||..+.......
T Consensus 65 ~vi~~ag~~~------~~------------~~~~~n~~~~~~l~~a~----~~~~-~------~~v~~SS~~~~~~~~~~ 115 (224)
T 3h2s_A 65 AVVDALSVPW------GS------------GRGYLHLDFATHLVSLL----RNSD-T------LAVFILGSASLAMPGAD 115 (224)
T ss_dssp EEEECCCCCT------TS------------SCTHHHHHHHHHHHHTC----TTCC-C------EEEEECCGGGSBCTTCS
T ss_pred EEEECCccCC------Cc------------chhhHHHHHHHHHHHHH----HHcC-C------cEEEEecceeeccCCCC
Confidence 9999999641 00 12356777776666654 4444 3 99999987665432110
Q ss_pred ---------C--CccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 190 ---------G--GWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 190 ---------~--~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
. ....|+.+|.+.+.+ +.+ ....|++++ .+.||.+.
T Consensus 116 ~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~---~~~~~i~~~-ivrp~~v~ 162 (224)
T 3h2s_A 116 HPMILDFPESAASQPWYDGALYQYYEY-QFL---QMNANVNWI-GISPSEAF 162 (224)
T ss_dssp SCGGGGCCGGGGGSTTHHHHHHHHHHH-HHH---TTCTTSCEE-EEEECSBC
T ss_pred ccccccCCCCCccchhhHHHHHHHHHH-HHH---HhcCCCcEE-EEcCcccc
Confidence 0 156799999999855 222 245689944 89998763
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=129.83 Aligned_cols=136 Identities=24% Similarity=0.240 Sum_probs=107.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
..+++|||||+|+||++++++|+++|++ |++++|+ .+|++|.+++.++++..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~---------------------~~Dl~d~~~~~~~~~~~----- 62 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVE--VIPTDVQ---------------------DLDITNVLAVNKFFNEK----- 62 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEE--EEEECTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCe--EEeccCc---------------------cCCCCCHHHHHHHHHhc-----
Confidence 3589999999999999999999999986 8888885 27999999998888765
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+|||+||... .+.+.+++++.+++|+.++..+++++.+. + .++|++||.....+.
T Consensus 63 ~~d~vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-------~~iv~~SS~~v~~~~ 120 (292)
T 1vl0_A 63 KPNVVINCAAHTA-----------VDKCEEQYDLAYKINAIGPKNLAAAAYSV----G-------AEIVQISTDYVFDGE 120 (292)
T ss_dssp CCSEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCSC
T ss_pred CCCEEEECCccCC-----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEechHHeECCC
Confidence 7899999999542 13345678889999999999999998753 1 289999997543221
Q ss_pred C--------CCCCccchhhhHHHHHHHHHHhhhh
Q 026924 187 N--------RLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 187 ~--------~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
. +......|+.+|.+.+.+++.++.+
T Consensus 121 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 154 (292)
T 1vl0_A 121 AKEPITEFDEVNPQSAYGKTKLEGENFVKALNPK 154 (292)
T ss_dssp CSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCC
Confidence 1 0113468999999999999998754
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-16 Score=124.30 Aligned_cols=148 Identities=15% Similarity=0.138 Sum_probs=102.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|+++|++ |++++|+.+..+.+. .++.++.+|++|+++ +.+.++|
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d 63 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHE--VTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQN 63 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCE--EEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCC
Confidence 5999999999999999999999996 888899865433221 568899999999886 2335799
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC-
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR- 188 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~- 188 (231)
+||||+|... . ..+.|+.++..+++++ ++.+.+ ++|++||..+..+...
T Consensus 64 ~vi~~ag~~~-------~-------------~~~~~~~~~~~l~~a~----~~~~~~------~~v~~SS~~~~~~~~~~ 113 (221)
T 3ew7_A 64 VVVDAYGISP-------D-------------EAEKHVTSLDHLISVL----NGTVSP------RLLVVGGAASLQIDEDG 113 (221)
T ss_dssp EEEECCCSST-------T-------------TTTSHHHHHHHHHHHH----CSCCSS------EEEEECCCC--------
T ss_pred EEEECCcCCc-------c-------------ccchHHHHHHHHHHHH----HhcCCc------eEEEEecceEEEcCCCC
Confidence 9999999641 1 1445667766666655 444333 9999999877654211
Q ss_pred --------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 189 --------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 189 --------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
......|+.+|.+.+.+. .+.. ...|++++ .+.||.+
T Consensus 114 ~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~-ivrp~~v 158 (221)
T 3ew7_A 114 NTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWT-YISPSAM 158 (221)
T ss_dssp -----------CCCSCCHHHHHHHHH-HHHT--TTTTSCEE-EEECSSC
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEE-EEeCcce
Confidence 112346999999999873 2222 25789944 8999876
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=131.80 Aligned_cols=155 Identities=13% Similarity=0.061 Sum_probs=110.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.++++++|||||+|+||++++++|+++|+. .... ...+..+.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--------~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~--- 60 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAGL--------PGED-----------WVFVSSKDADLTDTAQTRALFEKV--- 60 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTCC--------TTCE-----------EEECCTTTCCTTSHHHHHHHHHHS---
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCCc--------cccc-----------ccccCceecccCCHHHHHHHHhhc---
Confidence 356789999999999999999999999871 1100 012334468999999998888763
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++|+|||+|+... ....+.+++++.+++|+.++..+++++... +. .++|++||... +
T Consensus 61 --~~d~Vih~A~~~~----------~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~------~~~v~~SS~~v-y 117 (319)
T 4b8w_A 61 --QPTHVIHLAAMVG----------GLFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GA------RKVVSCLSTCI-F 117 (319)
T ss_dssp --CCSEEEECCCCCC----------CHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TC------SEEEEECCGGG-S
T ss_pred --CCCEEEECceecc----------cccccccCHHHHHHHHHHHHHHHHHHHHHc----CC------CeEEEEcchhh-c
Confidence 6999999999631 122344556778999999999999988543 22 28999999743 3
Q ss_pred CC--------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 185 GD--------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 185 ~~--------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+. .+.|....|+.+|.+.+.+++.++.+. |++++ .+.|+.
T Consensus 118 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~-ilRp~~ 171 (319)
T 4b8w_A 118 PDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFT-AVIPTN 171 (319)
T ss_dssp CSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEE-EEEECE
T ss_pred CCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEE-EEeecc
Confidence 21 112222369999999999999988765 66633 555543
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-16 Score=131.50 Aligned_cols=157 Identities=15% Similarity=-0.008 Sum_probs=107.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC----ccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~----~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+++++++|||||+|+||++++++|+++|++ |++++|+... .+.+.... ...++.++.+|++
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~----------- 68 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEE--VTVLDDLRVPPMIPPEGTGKFL--EKPVLELEERDLS----------- 68 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCC--EEEECCCSSCCSSCCTTSSEEE--CSCGGGCCHHHHT-----------
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCE--EEEEecCCcccccchhhhhhhc--cCCCeeEEeCccc-----------
Confidence 456789999999999999999999999997 8888887652 22222111 1235666666765
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
++|+|||+|+... .....+...+.++ |+.++..+++++...- . .++|++||.
T Consensus 69 ------~~d~vi~~a~~~~-----------~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~----v------~~~v~~SS~ 120 (321)
T 3vps_A 69 ------DVRLVYHLASHKS-----------VPRSFKQPLDYLD-NVDSGRHLLALCTSVG----V------PKVVVGSTC 120 (321)
T ss_dssp ------TEEEEEECCCCCC-----------HHHHTTSTTTTHH-HHHHHHHHHHHHHHHT----C------CEEEEEEEG
T ss_pred ------cCCEEEECCccCC-----------hHHHHhCHHHHHH-HHHHHHHHHHHHHHcC----C------CeEEEecCH
Confidence 7999999999652 1122233455677 9999999999886542 1 289999986
Q ss_pred ccccCC--------CCCCCccchhhhHHHHHHHHHHhhhhccccCC-ceeeeccCCC
Q 026924 181 VGSIGD--------NRLGGWHSYRASKAALNHDKICVSGVWSKEGS-SYMYSVASRH 228 (231)
Q Consensus 181 ~~~~~~--------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi-~~~~~v~pg~ 228 (231)
...... .+......|+.+|.+.+.+++.++.+. |+ +++ .+-|+.
T Consensus 121 ~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~-ilRp~~ 173 (321)
T 3vps_A 121 EVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS---VAPEVG-IVRFFN 173 (321)
T ss_dssp GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEE-EEEECE
T ss_pred HHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCceE-EEEecc
Confidence 533211 112234679999999999999988764 66 533 555553
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.1e-16 Score=127.28 Aligned_cols=135 Identities=20% Similarity=0.219 Sum_probs=106.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||+|+||++++++|+++|++ |++++|. ++|++|.+++.+++++. ++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~ 57 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYD--IYPFDKK---------------------LLDITNISQVQQVVQEI-----RP 57 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEE--EEEECTT---------------------TSCTTCHHHHHHHHHHH-----CC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCE--EEEeccc---------------------ccCCCCHHHHHHHHHhc-----CC
Confidence 37999999999999999999999996 8888882 27999999999888876 78
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC--
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-- 186 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-- 186 (231)
|+|||+|+... .+.+.+++++.+++|+.++..+++++.+. + .++|++||.....+.
T Consensus 58 d~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~v~~SS~~vy~~~~~ 115 (287)
T 3sc6_A 58 HIIIHCAAYTK-----------VDQAEKERDLAYVINAIGARNVAVASQLV----G-------AKLVYISTDYVFQGDRP 115 (287)
T ss_dssp SEEEECCCCCC-----------HHHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCCCCS
T ss_pred CEEEECCcccC-----------hHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEchhhhcCCCCC
Confidence 99999999652 22334567889999999999999998543 1 279999987533221
Q ss_pred ------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 ------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 ------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+..+...|+.+|.+.+.+++.++.++
T Consensus 116 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 148 (287)
T 3sc6_A 116 EGYDEFHNPAPINIYGASKYAGEQFVKELHNKY 148 (287)
T ss_dssp SCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Confidence 112235689999999999999987643
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.2e-16 Score=128.91 Aligned_cols=160 Identities=13% Similarity=0.072 Sum_probs=113.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|+||++++++|+++| ++ |++++|+..... .... . ++. +.+|+++.+.++++++.. .++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~-~~~~-~----~~~-~~~d~~~~~~~~~~~~~~--~~~~~ 69 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGTK-FVNL-V----DLN-IADYMDKEDFLIQIMAGE--EFGDV 69 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC--EEEEECCSSGGG-GHHH-H----TSC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE--EEEEccCCCCch-hhhc-C----cce-eccccccHHHHHHHHhcc--ccCCC
Confidence 38999999999999999999999 76 888888765421 1111 1 122 678998888776665421 02369
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+|||+|+... . +.+++++.+++|+.++..+++++.+. + .++|++||... ++...
T Consensus 70 d~vi~~a~~~~-------~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v-~g~~~ 124 (310)
T 1eq2_A 70 EAIFHEGACSS-------T------TEWDGKYMMDNNYQYSKELLHYCLER----E-------IPFLYASSAAT-YGGRT 124 (310)
T ss_dssp CEEEECCSCCC-------T------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-------CCEEEEEEGGG-GTTCC
T ss_pred cEEEECccccc-------C------cccCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEeeHHH-hCCCC
Confidence 99999999652 1 23456778999999999999988643 1 17899998753 23211
Q ss_pred ---------CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 189 ---------LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 189 ---------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
......|+.+|.+.+.+++.++.+. |+++ +.+.||.+
T Consensus 125 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~-~~lrp~~v 170 (310)
T 1eq2_A 125 SDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQI-VGFRYFNV 170 (310)
T ss_dssp SCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCE-EEEEECEE
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCE-EEEeCCcE
Confidence 1224579999999999999988763 7884 37777654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=8.8e-16 Score=126.49 Aligned_cols=135 Identities=18% Similarity=0.143 Sum_probs=103.6
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|+||++++++|+ +|++ |++++|+.. ++.+|++|.+++.++++.. ++|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~--V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d 56 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGN--LIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPD 56 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSE--EEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCe--EEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCC
Confidence 69999999999999999999 8986 888888752 2468999999988887764 689
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC--
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-- 187 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-- 187 (231)
+|||+|+... ...+.+++++.+++|+.++..+++++.+. + .++|++||.....+..
T Consensus 57 ~vih~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~vy~~~~~~ 114 (299)
T 1n2s_A 57 VIVNAAAHTA-----------VDKAESEPELAQLLNATSVEAIAKAANET----G-------AWVVHYSTDYVFPGTGDI 114 (299)
T ss_dssp EEEECCCCCC-----------HHHHTTCHHHHHHHHTHHHHHHHHHHTTT----T-------CEEEEEEEGGGSCCCTTC
T ss_pred EEEECcccCC-----------HhhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CcEEEEecccEEeCCCCC
Confidence 9999998542 12234567788999999999999988532 1 2899999875332110
Q ss_pred ------CCCCccchhhhHHHHHHHHHHhhh
Q 026924 188 ------RLGGWHSYRASKAALNHDKICVSG 211 (231)
Q Consensus 188 ------~~~~~~~y~~sK~a~~~~~~~l~~ 211 (231)
+......|+.+|.+.+.+++.++.
T Consensus 115 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 144 (299)
T 1n2s_A 115 PWQETDATSPLNVYGKTKLAGEKALQDNCP 144 (299)
T ss_dssp CBCTTSCCCCSSHHHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHhCC
Confidence 112245899999999999988764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=125.23 Aligned_cols=136 Identities=15% Similarity=0.068 Sum_probs=100.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++++|||| +|+||++++++|+++|++ |++++|+.... ..++.++.+|++|.+++.++++ +
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~--V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~ 62 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHE--VTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------L 62 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCE--EEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------C
Confidence 356899999 599999999999999997 88888876542 3578889999999998876654 3
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
++|+|||+|+.. ..++++.+++|+.++..+++++.. .+. .++|++||... ++.
T Consensus 63 ~~d~vih~a~~~----------------~~~~~~~~~~n~~~~~~ll~a~~~----~~~------~~~v~~SS~~v-yg~ 115 (286)
T 3gpi_A 63 RPEILVYCVAAS----------------EYSDEHYRLSYVEGLRNTLSALEG----APL------QHVFFVSSTGV-YGQ 115 (286)
T ss_dssp CCSEEEECHHHH----------------HHC-----CCSHHHHHHHHHHTTT----SCC------CEEEEEEEGGG-CCC
T ss_pred CCCEEEEeCCCC----------------CCCHHHHHHHHHHHHHHHHHHHhh----CCC------CEEEEEcccEE-EcC
Confidence 699999999842 134567789999999999998852 222 28999998653 221
Q ss_pred C---------CCCCccchhhhHHHHHHHHHHh
Q 026924 187 N---------RLGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 187 ~---------~~~~~~~y~~sK~a~~~~~~~l 209 (231)
. +......|+.+|.+.+.+ +..
T Consensus 116 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~ 146 (286)
T 3gpi_A 116 EVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA 146 (286)
T ss_dssp CCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG
T ss_pred CCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc
Confidence 1 122356899999999998 653
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.61 E-value=7.2e-15 Score=120.30 Aligned_cols=141 Identities=18% Similarity=0.128 Sum_probs=105.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
|++|||||+|+||++++++|+++ |++ |++.+|+....+.+. ..++.++.+|++|.+++.++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~l~------~~~~~~~~~D~~d~~~l~~~~~------- 65 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQ--IIAIVRNVEKASTLA------DQGVEVRHGDYNQPESLQKAFA------- 65 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGG--EEEEESCTTTTHHHH------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCe--EEEEEcCHHHHhHHh------hcCCeEEEeccCCHHHHHHHHh-------
Confidence 46999999999999999999998 997 888889876544322 1357889999999988776654
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
.+|+|||+++.. .. + ++|+.++..+++++.. .+.+ ++|++||.... .
T Consensus 66 ~~d~vi~~a~~~-------~~--------~------~~n~~~~~~l~~a~~~----~~~~------~~v~~Ss~~~~-~- 112 (287)
T 2jl1_A 66 GVSKLLFISGPH-------YD--------N------TLLIVQHANVVKAARD----AGVK------HIAYTGYAFAE-E- 112 (287)
T ss_dssp TCSEEEECCCCC-------SC--------H------HHHHHHHHHHHHHHHH----TTCS------EEEEEEETTGG-G-
T ss_pred cCCEEEEcCCCC-------cC--------c------hHHHHHHHHHHHHHHH----cCCC------EEEEECCCCCC-C-
Confidence 579999999842 11 0 4688899888888753 2222 99999997653 2
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+ ..|+.+|.+.+.+++. .|++++ .+.||.+
T Consensus 113 --~~--~~y~~~K~~~E~~~~~-------~~~~~~-ilrp~~~ 143 (287)
T 2jl1_A 113 --SI--IPLAHVHLATEYAIRT-------TNIPYT-FLRNALY 143 (287)
T ss_dssp --CC--STHHHHHHHHHHHHHH-------TTCCEE-EEEECCB
T ss_pred --CC--CchHHHHHHHHHHHHH-------cCCCeE-EEECCEe
Confidence 12 3799999999999863 578844 7777754
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-15 Score=133.78 Aligned_cols=160 Identities=16% Similarity=0.083 Sum_probs=116.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc---hhhhh---------hcCCCceeEEEecCCChHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLK---------NRFPERLDVLQLDLTVESTIE 95 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~---~~~~~---------~~~~~~v~~~~~Dls~~~~v~ 95 (231)
.+++|||||+|.||++++++|.+.|++ |++++|+....+. +.+.+ .....++.++.+|+++++.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHR--IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEE--EEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCE--EEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 479999999999999999999999996 8888998764322 21111 122568999999999987776
Q ss_pred HHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEE
Q 026924 96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA 175 (231)
Q Consensus 96 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv 175 (231)
...++|+|||||+... ....+++.+++|+.++..+++.+.+ .. .++|
T Consensus 228 --------~~~~~D~Vih~Aa~~~--------------~~~~~~~~~~~Nv~gt~~ll~~a~~---~~--------~~~v 274 (508)
T 4f6l_B 228 --------LPENMDTIIHAGARTD--------------HFGDDDEFEKVNVQGTVDVIRLAQQ---HH--------ARLI 274 (508)
T ss_dssp --------CSSCCSEEEECCCC----------------------CCHHHHHHHHHHHHHHHHT---TT--------CEEE
T ss_pred --------CccCCCEEEECCceec--------------CCCCHHHHhhhHHHHHHHHHHHHHh---CC--------CcEE
Confidence 3468999999998541 1234567889999999999999875 11 2899
Q ss_pred EeccCccccCCC-----------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 176 NLSARVGSIGDN-----------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 176 ~iss~~~~~~~~-----------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
++||... +.. +......|+.+|.+.+.+++.++. .|++++ .+-||.|
T Consensus 275 ~iSS~~v--G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~-ilRp~~v 338 (508)
T 4f6l_B 275 YVSTISV--GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGR-IVRVGNL 338 (508)
T ss_dssp EEEESCT--TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEE-EEEECCE
T ss_pred EeCChhh--ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEE-EEeccee
Confidence 9998775 110 012456899999999999988643 588844 7777754
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-14 Score=120.74 Aligned_cols=146 Identities=13% Similarity=0.005 Sum_probs=102.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEec-CCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD-LTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-ls~~~~v~~~~~~~~~~~ 105 (231)
+++++|||||+|+||++++++|++.|++ |++.+|+...... +.+.. ..++.++.+| ++|.+++.++++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~--~~l~~-~~~v~~v~~D~l~d~~~l~~~~~------ 72 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHH--VRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLFE------ 72 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHHT------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCCChhhH--HHHhh-cCCcEEEECCccCCHHHHHHHHh------
Confidence 4678999999999999999999999997 8888898765421 11111 2368889999 999988877654
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCc-cc
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV-GS 183 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~-~~ 183 (231)
.+|++|||++... .+.|..+ ..+++++. +.+ .+ ++|++||.. +.
T Consensus 73 -~~d~Vi~~a~~~~----------------------~~~~~~~-~~l~~aa~----~~g~v~------~~V~~SS~~~~~ 118 (352)
T 1xgk_A 73 -GAHLAFINTTSQA----------------------GDEIAIG-KDLADAAK----RAGTIQ------HYIYSSMPDHSL 118 (352)
T ss_dssp -TCSEEEECCCSTT----------------------SCHHHHH-HHHHHHHH----HHSCCS------EEEEEECCCGGG
T ss_pred -cCCEEEEcCCCCC----------------------cHHHHHH-HHHHHHHH----HcCCcc------EEEEeCCccccc
Confidence 4799999987431 0124433 45555543 322 22 999999976 34
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
.+ .+....|+.+|.+.+.+++.+ |++++ .+.||.
T Consensus 119 ~~---~~~~~~y~~sK~~~E~~~~~~-------gi~~~-ivrpg~ 152 (352)
T 1xgk_A 119 YG---PWPAVPMWAPKFTVENYVRQL-------GLPST-FVYAGI 152 (352)
T ss_dssp TS---SCCCCTTTHHHHHHHHHHHTS-------SSCEE-EEEECE
T ss_pred cC---CCCCccHHHHHHHHHHHHHHc-------CCCEE-EEecce
Confidence 33 234467999999999999763 67733 666764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-14 Score=116.32 Aligned_cols=138 Identities=17% Similarity=0.142 Sum_probs=99.4
Q ss_pred EEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++|||||+|+||++++++|+++ |++ |++++|+....+.+.. .++.++.+|++|++++.++++ .
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~-------~ 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQ--IVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSALQ-------G 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGG--EEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCce--EEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHHh-------C
Confidence 3899999999999999999998 997 8888898765443221 357889999999988776654 5
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+|||+++.. + ..|+.++..+++++... +.+ ++|++||.... .
T Consensus 66 ~d~vi~~a~~~-------~----------------~~~~~~~~~l~~a~~~~----~~~------~~v~~Ss~~~~-~-- 109 (286)
T 2zcu_A 66 VEKLLLISSSE-------V----------------GQRAPQHRNVINAAKAA----GVK------FIAYTSLLHAD-T-- 109 (286)
T ss_dssp CSEEEECC-------------------------------CHHHHHHHHHHHH----TCC------EEEEEEETTTT-T--
T ss_pred CCEEEEeCCCC-------c----------------hHHHHHHHHHHHHHHHc----CCC------EEEEECCCCCC-C--
Confidence 79999999842 0 02566777777776432 222 89999997654 2
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+ ..|+.+|.+.+.+++. .|++ ++.+.||.+
T Consensus 110 -~~--~~y~~sK~~~e~~~~~-------~~~~-~~ilrp~~~ 140 (286)
T 2zcu_A 110 -SP--LGLADEHIETEKMLAD-------SGIV-YTLLRNGWY 140 (286)
T ss_dssp -CC--STTHHHHHHHHHHHHH-------HCSE-EEEEEECCB
T ss_pred -Cc--chhHHHHHHHHHHHHH-------cCCC-eEEEeChHH
Confidence 12 4799999999999864 5788 448888764
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.5e-14 Score=117.06 Aligned_cols=151 Identities=17% Similarity=0.021 Sum_probs=102.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|++|||||+|+||++++++|+++| ++ |.+++|+...... ..+. ..++.++.+|++|++++.++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~--V~~~~R~~~~~~~--~~l~--~~~~~~~~~D~~d~~~l~~~~~------- 71 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFK--VRVVTRNPRKKAA--KELR--LQGAEVVQGDQDDQVIMELALN------- 71 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSE--EEEEESCTTSHHH--HHHH--HTTCEEEECCTTCHHHHHHHHT-------
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCce--EEEEEcCCCCHHH--HHHH--HCCCEEEEecCCCHHHHHHHHh-------
Confidence 4789999999999999999999998 76 8888998765321 1111 1357889999999988876654
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
.+|+|||+++... .. ..+.|+.++..+++++. +.+.+ ++|++|+ .+..+.
T Consensus 72 ~~d~vi~~a~~~~-------~~------------~~~~~~~~~~~~~~aa~----~~gv~------~iv~~S~-~~~~~~ 121 (299)
T 2wm3_A 72 GAYATFIVTNYWE-------SC------------SQEQEVKQGKLLADLAR----RLGLH------YVVYSGL-ENIKKL 121 (299)
T ss_dssp TCSEEEECCCHHH-------HT------------CHHHHHHHHHHHHHHHH----HHTCS------EEEECCC-CCHHHH
T ss_pred cCCEEEEeCCCCc-------cc------------cchHHHHHHHHHHHHHH----HcCCC------EEEEEcC-cccccc
Confidence 5899999998531 00 12344555555555543 33332 8898655 433321
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
...+....|..+|.+++.+++. .|++ .+.+.||.+
T Consensus 122 ~~~~~~~~y~~sK~~~e~~~~~-------~gi~-~~ilrp~~~ 156 (299)
T 2wm3_A 122 TAGRLAAAHFDGKGEVEEYFRD-------IGVP-MTSVRLPCY 156 (299)
T ss_dssp TTTSCCCHHHHHHHHHHHHHHH-------HTCC-EEEEECCEE
T ss_pred CCCcccCchhhHHHHHHHHHHH-------CCCC-EEEEeecHH
Confidence 1112245799999999998865 4787 447888754
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=116.35 Aligned_cols=150 Identities=13% Similarity=0.090 Sum_probs=103.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+.+++|||||+|+||+++++.|++.|++ |++++|+...... ..........++.++.+|++|.+++.+++++.
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~---- 82 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRP--TYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH---- 82 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCC--EEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC----
Confidence 4578999999999999999999999987 8888897633222 21111111357899999999999998888763
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc-
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI- 184 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~- 184 (231)
++|+|||+++. .|+.++..+++++...- .. .+++. | ..+..
T Consensus 83 -~~d~Vi~~a~~--------------------------~n~~~~~~l~~aa~~~g---~v------~~~v~-S-~~g~~~ 124 (346)
T 3i6i_A 83 -EIDIVVSTVGG--------------------------ESILDQIALVKAMKAVG---TI------KRFLP-S-EFGHDV 124 (346)
T ss_dssp -TCCEEEECCCG--------------------------GGGGGHHHHHHHHHHHC---CC------SEEEC-S-CCSSCT
T ss_pred -CCCEEEECCch--------------------------hhHHHHHHHHHHHHHcC---Cc------eEEee-c-ccCCCC
Confidence 78999999983 16677777777775432 01 16664 3 33332
Q ss_pred C-CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 185 G-DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 185 ~-~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
. ..+.+....|+.+|.+.+.+.+. .|+++. .+.||.
T Consensus 125 ~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~t-ivrpg~ 161 (346)
T 3i6i_A 125 NRADPVEPGLNMYREKRRVRQLVEE-------SGIPFT-YICCNS 161 (346)
T ss_dssp TTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBE-EEECCE
T ss_pred CccCcCCCcchHHHHHHHHHHHHHH-------cCCCEE-EEEecc
Confidence 1 11234456899999999988875 467744 666664
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-13 Score=115.87 Aligned_cols=103 Identities=18% Similarity=0.129 Sum_probs=82.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcC-----CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKN-----DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G-----~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+|++|||||+|+||++++++|+++| ++ |++++|+..... ....++.++.+|++|.+++.++++..
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~--V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~- 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWK--VYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL- 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEE--EEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceE--EEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence 4789999999999999999999999 76 888898765533 11347888999999998887766532
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
+++|+|||+|+... +++++.+++|+.++..+++++.+.
T Consensus 71 ---~~~d~vih~a~~~~----------------~~~~~~~~~n~~~~~~l~~a~~~~ 108 (364)
T 2v6g_A 71 ---TDVTHVFYVTWANR----------------STEQENCEANSKMFRNVLDAVIPN 108 (364)
T ss_dssp ---TTCCEEEECCCCCC----------------SSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ---CCCCEEEECCCCCc----------------chHHHHHHHhHHHHHHHHHHHHHh
Confidence 34999999998531 235678899999999999998765
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.47 E-value=4.5e-13 Score=110.61 Aligned_cols=143 Identities=17% Similarity=0.183 Sum_probs=93.2
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-C------CccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-N------GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~------~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
++++|||||+|+||++++++|++.|++ |++.+|+. . ..+.+.+ +. ..++.++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~-l~--~~~v~~v~~D~~d~~~l~~~~~- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP--TYALVRKTITAANPETKEELIDN-YQ--SLGVILLEGDINDHETLVKAIK- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC--EEEEECCSCCSSCHHHHHHHHHH-HH--HTTCEEEECCTTCHHHHHHHHT-
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc--EEEEECCCcccCChHHHHHHHHH-HH--hCCCEEEEeCCCCHHHHHHHHh-
Confidence 467999999999999999999999997 78888876 1 1111111 11 2457889999999988776664
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEecc
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSA 179 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss 179 (231)
.+|+|||+++.. . +.++..+++++. +.+ .. ++| .|
T Consensus 76 ------~~d~vi~~a~~~--------~------------------~~~~~~l~~aa~----~~g~v~------~~v--~S 111 (307)
T 2gas_A 76 ------QVDIVICAAGRL--------L------------------IEDQVKIIKAIK----EAGNVK------KFF--PS 111 (307)
T ss_dssp ------TCSEEEECSSSS--------C------------------GGGHHHHHHHHH----HHCCCS------EEE--CS
T ss_pred ------CCCEEEECCccc--------c------------------cccHHHHHHHHH----hcCCce------EEe--ec
Confidence 589999999853 1 223344555543 222 22 666 24
Q ss_pred CccccCC---CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 180 RVGSIGD---NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 180 ~~~~~~~---~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
..+.... ...|....| .+|.+++.+++. .|+++. .+.||.+
T Consensus 112 ~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~-~lrp~~~ 155 (307)
T 2gas_A 112 EFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYT-YLCCHAF 155 (307)
T ss_dssp CCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBE-EEECCEE
T ss_pred ccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeE-EEEccee
Confidence 4442111 112334578 999999988763 367733 6677653
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=108.67 Aligned_cols=149 Identities=12% Similarity=0.081 Sum_probs=98.0
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.+++|||||+|+||++++++|++.|++ |++.+|+.... +...........++.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~------ 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP--TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------ 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc--EEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh------
Confidence 357999999999999999999999997 88888886432 11111111113468889999999988876654
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCcccc
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~ 184 (231)
.+|+|||+++... . ..|+.++..+++++.. .+ .+ ++|. |..+..
T Consensus 76 -~~d~vi~~a~~~~-------~---------------~~~~~~~~~l~~aa~~----~g~v~------~~v~--S~~g~~ 120 (313)
T 1qyd_A 76 -QVDVVISALAGGV-------L---------------SHHILEQLKLVEAIKE----AGNIK------RFLP--SEFGMD 120 (313)
T ss_dssp -TCSEEEECCCCSS-------S---------------STTTTTHHHHHHHHHH----SCCCS------EEEC--SCCSSC
T ss_pred -CCCEEEECCcccc-------c---------------hhhHHHHHHHHHHHHh----cCCCc------eEEe--cCCcCC
Confidence 5899999998652 1 1256666667776642 22 22 7764 444421
Q ss_pred CC----CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 185 GD----NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 185 ~~----~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
.. ...|....| .+|.+++.+++. .|+++. .+.||.
T Consensus 121 ~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~-ilrp~~ 159 (313)
T 1qyd_A 121 PDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYT-YVSSNM 159 (313)
T ss_dssp TTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBC-EEECCE
T ss_pred ccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeE-EEEece
Confidence 11 012334568 999999988863 366633 556664
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=107.69 Aligned_cols=141 Identities=14% Similarity=0.111 Sum_probs=94.9
Q ss_pred EEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|+||++++++|++. |++ |++.+|+.+..+.+. ..++.++.+|++|++++.++++ .+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~--V~~~~R~~~~~~~~~------~~~v~~~~~D~~d~~~l~~~~~-------~~ 66 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDH--FHIGVRNVEKVPDDW------RGKVSVRQLDYFNQESMVEAFK-------GM 66 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTT--EEEEESSGGGSCGGG------BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCc--EEEEECCHHHHHHhh------hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence 5999999999999999999998 897 888899876544321 3478899999999988776654 68
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+|||+++... . ...|+.++..+++++ ++.+.+ ++|++||......
T Consensus 67 d~vi~~a~~~~-------~--------------~~~~~~~~~~l~~aa----~~~gv~------~iv~~Ss~~~~~~--- 112 (289)
T 3e48_A 67 DTVVFIPSIIH-------P--------------SFKRIPEVENLVYAA----KQSGVA------HIIFIGYYADQHN--- 112 (289)
T ss_dssp SEEEECCCCCC-------S--------------HHHHHHHHHHHHHHH----HHTTCC------EEEEEEESCCSTT---
T ss_pred CEEEEeCCCCc-------c--------------chhhHHHHHHHHHHH----HHcCCC------EEEEEcccCCCCC---
Confidence 99999998542 1 012555555555555 333333 9999999543221
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
.+|..++... .+...+.+.|++ .+.+.||.+
T Consensus 113 ----~~~~~~~~~~-----~~e~~~~~~g~~-~~ilrp~~~ 143 (289)
T 3e48_A 113 ----NPFHMSPYFG-----YASRLLSTSGID-YTYVRMAMY 143 (289)
T ss_dssp ----CCSTTHHHHH-----HHHHHHHHHCCE-EEEEEECEE
T ss_pred ----CCCccchhHH-----HHHHHHHHcCCC-EEEEecccc
Confidence 1233333211 222334467898 448888864
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.43 E-value=7.4e-13 Score=112.39 Aligned_cols=129 Identities=14% Similarity=0.084 Sum_probs=97.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcCC-ccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|.||++++++|++.|+ + |+..+|+ +|.+++.++++ .+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~--v~~~d~~-------------------------~d~~~l~~~~~-------~~ 47 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHH--IFEVHRQ-------------------------TKEEELESALL-------KA 47 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCE--EEECCTT-------------------------CCHHHHHHHHH-------HC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCE--EEEECCC-------------------------CCHHHHHHHhc-------cC
Confidence 699999999999999999999998 5 7766654 56777777765 37
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+|||+|+... + +++++.+++|+.++..+++++... +. ..++|++||.....
T Consensus 48 d~Vih~a~~~~------~---------~~~~~~~~~n~~~~~~l~~a~~~~----~~-----~~~~v~~Ss~~~~~---- 99 (369)
T 3st7_A 48 DFIVHLAGVNR------P---------EHDKEFSLGNVSYLDHVLDILTRN----TK-----KPAILLSSSIQATQ---- 99 (369)
T ss_dssp SEEEECCCSBC------T---------TCSTTCSSSCCBHHHHHHHHHTTC----SS-----CCEEEEEEEGGGGS----
T ss_pred CEEEECCcCCC------C---------CCHHHHHHHHHHHHHHHHHHHHHh----CC-----CCeEEEeCchhhcC----
Confidence 99999999642 1 244567899999999999987532 11 12899999876432
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASR 227 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg 227 (231)
...|+.+|.+.+.+++.++.+. |++++ .+-|+
T Consensus 100 ---~~~Y~~sK~~~E~~~~~~~~~~---g~~~~-i~R~~ 131 (369)
T 3st7_A 100 ---DNPYGESKLQGEQLLREYAEEY---GNTVY-IYRWP 131 (369)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHH---CCCEE-EEEEC
T ss_pred ---CCCchHHHHHHHHHHHHHHHHh---CCCEE-EEECC
Confidence 3579999999999999988764 55533 44443
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=5.6e-14 Score=115.66 Aligned_cols=110 Identities=18% Similarity=0.203 Sum_probs=84.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++|||||+||+|++++..|++.|++ |++++|+.++.+.+.+.+... .++.++.+|+++++++.++++
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~--V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----- 187 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAE--VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK----- 187 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-----
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-----
Confidence 468999999999999999999999999996 888999876666654443321 246678899999988766554
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhch-HHHhhhhhhhhhHHH
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEK-SSLMLAYEVNAVGPI 150 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~ 150 (231)
.+|+||||+|... ...+..+.+. ++|+..+++|+.+++
T Consensus 188 --~~DvlVn~ag~g~------~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 188 --GAHFVFTAGAIGL------ELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp --TCSEEEECCCTTC------CSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred --hCCEEEECCCccc------cCCChhHcCchHHHHHHHHhhhhhhH
Confidence 3799999998642 1233444554 778889999998876
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-12 Score=113.92 Aligned_cols=153 Identities=12% Similarity=0.026 Sum_probs=103.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++++|||||+|.||++++++|++.|++ |++++|+....+. +.+|+.+.. .+.+.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~--V~~l~R~~~~~~~--------------v~~d~~~~~---------~~~l~~ 201 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHE--VIQLVRKEPKPGK--------------RFWDPLNPA---------SDLLDG 201 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSSCCTTC--------------EECCTTSCC---------TTTTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCCccc--------------eeecccchh---------HHhcCC
Confidence 578999999999999999999999997 8888998764321 456765431 233458
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc---
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI--- 184 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~--- 184 (231)
+|+|||+|+... . ...+.+.++..+++|+.++..+++++.. ..+. .++|++||....-
T Consensus 202 ~D~Vih~A~~~~-------~---~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~------~r~V~~SS~~vyg~~~ 262 (516)
T 3oh8_A 202 ADVLVHLAGEPI-------F---GRFNDSHKEAIRESRVLPTKFLAELVAE---STQC------TTMISASAVGFYGHDR 262 (516)
T ss_dssp CSEEEECCCC---------------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSC------CEEEEEEEGGGGCSEE
T ss_pred CCEEEECCCCcc-------c---cccchhHHHHHHHHHHHHHHHHHHHHHh---cCCC------CEEEEeCcceEecCCC
Confidence 999999999642 1 1344556778899999999999997432 2222 2899999854321
Q ss_pred -----CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 185 -----GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 185 -----~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
......+...|+.+|...+.+.+ +....|++++ .+.||.+
T Consensus 263 ~~~~~~E~~~~~~~~y~~~~~~~E~~~~----~~~~~gi~~~-ilRp~~v 307 (516)
T 3oh8_A 263 GDEILTEESESGDDFLAEVCRDWEHATA----PASDAGKRVA-FIRTGVA 307 (516)
T ss_dssp EEEEECTTSCCCSSHHHHHHHHHHHTTH----HHHHTTCEEE-EEEECEE
T ss_pred CCCccCCCCCCCcChHHHHHHHHHHHHH----HHHhCCCCEE-EEEeeEE
Confidence 00001133457777777665543 3456788844 7777754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.8e-12 Score=104.86 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=93.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++||||+ |.||++++++|+++|++ |++++|+....+.+.. .++.++.+|++|.+ +.++
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~ 64 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWR--IIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGV 64 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCE--EEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCE--EEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCC
Confidence 68999998 99999999999999996 8888998755433221 46889999999833 4579
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||+|+... .. +. . +-.+++++... . .+. .++|++||.. .++..
T Consensus 65 d~vi~~a~~~~-------~~-------~~----~------~~~l~~a~~~~-~-~~~------~~~v~~Ss~~-vyg~~~ 111 (286)
T 3ius_A 65 THLLISTAPDS-------GG-------DP----V------LAALGDQIAAR-A-AQF------RWVGYLSTTA-VYGDHD 111 (286)
T ss_dssp CEEEECCCCBT-------TB-------CH----H------HHHHHHHHHHT-G-GGC------SEEEEEEEGG-GGCCCT
T ss_pred CEEEECCCccc-------cc-------cH----H------HHHHHHHHHhh-c-CCc------eEEEEeecce-ecCCCC
Confidence 99999998642 11 00 0 11223333221 0 121 2899999864 33211
Q ss_pred --------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 188 --------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 188 --------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
+......|+.+|.+.+.+++.+ .|++++ .+-|+.
T Consensus 112 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~-ilRp~~ 153 (286)
T 3ius_A 112 GAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLH-VFRLAG 153 (286)
T ss_dssp TCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEE-EEEECE
T ss_pred CCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEE-EEeccc
Confidence 1223357999999999999887 567733 666654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=4.8e-12 Score=104.45 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=61.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc---cchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA---TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~---~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|||||+|+||++++++|++.|++ |++.+|+.... +...........++.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP--TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC--EEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----
Confidence 367999999999999999999999987 88888876432 11111111113468889999999988877665
Q ss_pred cCCccEEEEcccc
Q 026924 105 YGSLNLLINASGI 117 (231)
Q Consensus 105 ~g~id~lv~~ag~ 117 (231)
.+|+|||+++.
T Consensus 77 --~~d~vi~~a~~ 87 (308)
T 1qyc_A 77 --NVDVVISTVGS 87 (308)
T ss_dssp --TCSEEEECCCG
T ss_pred --CCCEEEECCcc
Confidence 48999999984
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.1e-12 Score=105.52 Aligned_cols=77 Identities=17% Similarity=0.166 Sum_probs=60.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++|||||+|+||++++++|++.|++ |.+++|+... .+.+.++ . ..++.++.+|++|.+++.++++ .
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~l-~--~~~v~~v~~Dl~d~~~l~~a~~-------~ 79 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHP--TYVFTRPNSSKTTLLDEF-Q--SLGAIIVKGELDEHEKLVELMK-------K 79 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCC--EEEEECTTCSCHHHHHHH-H--HTTCEEEECCTTCHHHHHHHHT-------T
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCc--EEEEECCCCchhhHHHHh-h--cCCCEEEEecCCCHHHHHHHHc-------C
Confidence 57999999999999999999999997 8888898752 2222222 1 2457889999999988877664 4
Q ss_pred ccEEEEcccc
Q 026924 108 LNLLINASGI 117 (231)
Q Consensus 108 id~lv~~ag~ 117 (231)
+|+|||+++.
T Consensus 80 ~d~vi~~a~~ 89 (318)
T 2r6j_A 80 VDVVISALAF 89 (318)
T ss_dssp CSEEEECCCG
T ss_pred CCEEEECCch
Confidence 8999999984
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.2e-12 Score=107.18 Aligned_cols=145 Identities=11% Similarity=0.077 Sum_probs=91.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCc--cchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|||||+|+||++++++|++.|++ |.+++|+. ... +...........++.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~----- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHP--TFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK----- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCC--EEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCc--EEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-----
Confidence 357999999999999999999999997 88888876 211 11111100012468889999999988877665
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCC-CCcccCceEEEEeccCccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGS 183 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~ 183 (231)
.+|+|||+++.. . +.++..+++++. +.+ .+ ++| .|..+.
T Consensus 77 --~~d~vi~~a~~~--------~------------------~~~~~~l~~aa~----~~g~v~------~~v--~S~~g~ 116 (321)
T 3c1o_A 77 --QVDIVISALPFP--------M------------------ISSQIHIINAIK----AAGNIK------RFL--PSDFGC 116 (321)
T ss_dssp --TCSEEEECCCGG--------G------------------SGGGHHHHHHHH----HHCCCC------EEE--CSCCSS
T ss_pred --CCCEEEECCCcc--------c------------------hhhHHHHHHHHH----HhCCcc------EEe--cccccc
Confidence 489999999843 0 223344445443 222 22 676 344442
Q ss_pred cCC---CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 184 IGD---NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 184 ~~~---~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
... ...|....| .+|.+++.+++. .|+++. .+.||.
T Consensus 117 ~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~-~lrp~~ 155 (321)
T 3c1o_A 117 EEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYT-YVSANC 155 (321)
T ss_dssp CGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBE-EEECCE
T ss_pred CccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeE-EEEece
Confidence 110 011223468 999999988864 356633 556664
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.5e-10 Score=90.02 Aligned_cols=79 Identities=11% Similarity=0.169 Sum_probs=60.3
Q ss_pred cccCeEEEEecC----------------CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecC
Q 026924 25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 25 ~~~~k~~LVtGa----------------s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
+++||++||||| ||+||+++|+.|++.|++ |++++++.. ++. +..+ -.+|+
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~--V~l~~~~~~-l~~--------~~g~--~~~dv 71 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN--VTLVSGPVS-LPT--------PPFV--KRVDV 71 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE--EEEEECSCC-CCC--------CTTE--EEEEC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE--EEEEECCcc-ccc--------CCCC--eEEcc
Confidence 478999999999 689999999999999997 777776542 111 1112 24677
Q ss_pred CChHHHHHHHHHHHHHcCCccEEEEccccCC
Q 026924 89 TVESTIEASAKSIKEKYGSLNLLINASGILS 119 (231)
Q Consensus 89 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~ 119 (231)
++. +++++.+.+.++++|++|||||...
T Consensus 72 ~~~---~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 72 MTA---LEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp CSH---HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred CcH---HHHHHHHHHhcCCCCEEEECCcccC
Confidence 764 4466777788899999999999764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.8e-09 Score=87.54 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=66.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||++++++|+++|++ |..+.|++...+ + ..| .+ ..+.+..+|
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~--V~~l~R~~~~~~------------~---~~~-----~~------~~~~l~~~d 53 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHE--VTLVSRKPGPGR------------I---TWD-----EL------AASGLPSCD 53 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCTTE------------E---EHH-----HH------HHHCCCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCcCe------------e---ecc-----hh------hHhhccCCC
Confidence 5999999999999999999999997 777788754311 1 111 10 123356899
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhh
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP 158 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 158 (231)
++||.|+... .......+.+..++.++.|+.++-.+.+.+..
T Consensus 54 ~vihla~~~i-------~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~ 95 (298)
T 4b4o_A 54 AAVNLAGENI-------LNPLRRWNETFQKEVLGSRLETTQLLAKAITK 95 (298)
T ss_dssp EEEECCCCCS-------SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCcc-------cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999998532 22233345566677889999999888877643
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=85.40 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=58.5
Q ss_pred cCeEEEEecC----------------CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC
Q 026924 27 KGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90 (231)
Q Consensus 27 ~~k~~LVtGa----------------s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~ 90 (231)
+||++||||| +|++|.++|+.|++.|++ |++++++...... .+..+ |+.+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~--V~lv~~~~~~~~~-------~~~~~-----~~~~ 67 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE--VCLITTKRALKPE-------PHPNL-----SIRE 67 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE--EEEEECTTSCCCC-------CCTTE-----EEEE
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE--EEEEeCCcccccc-------CCCCe-----EEEE
Confidence 5899999999 788999999999999997 8888886532110 01222 2333
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEccccC
Q 026924 91 ESTIEASAKSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 91 ~~~v~~~~~~~~~~~g~id~lv~~ag~~ 118 (231)
.++++++++.+.+.++++|++|+||+..
T Consensus 68 v~s~~em~~~v~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 68 ITNTKDLLIEMQERVQDYQVLIHSMAVS 95 (232)
T ss_dssp CCSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred HhHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence 3467777888888889999999999976
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-09 Score=81.21 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=63.4
Q ss_pred chhHHHHHHHHhcCCccEEEEeecCCCCccc---hhhhhhcCCCceeEEEecCCCh--HHHHHHHHHHHHHcCCccEEEE
Q 026924 39 GIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVE--STIEASAKSIKEKYGSLNLLIN 113 (231)
Q Consensus 39 gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dls~~--~~v~~~~~~~~~~~g~id~lv~ 113 (231)
-++.++++.|++.|++ |++..|+....+. ..+..+..|.++..+++|++++ ++++++++.+.+.+|+ |+|||
T Consensus 27 ~p~~a~a~~La~~Ga~--vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn 103 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVD--VVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH 103 (157)
T ss_dssp CCCHHHHHHHHHTTCC--EEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred CCCHHHHHHHHHcCCC--EEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence 4789999999999998 7777776544332 3444555677899999999999 9999999999998999 99999
Q ss_pred ccccC
Q 026924 114 ASGIL 118 (231)
Q Consensus 114 ~ag~~ 118 (231)
|+|+.
T Consensus 104 nAgg~ 108 (157)
T 3gxh_A 104 CLANY 108 (157)
T ss_dssp CSBSH
T ss_pred CCCCC
Confidence 99964
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-09 Score=89.92 Aligned_cols=154 Identities=9% Similarity=-0.027 Sum_probs=96.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCc-----cEEEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~-----~~vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
++++||||+|.||.+++..|++.|.. ..|++.|++.. ..+.....+.. ..+.+. .|+++.+++.+.
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~--~~~~~~-~di~~~~~~~~a---- 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED--CAFPLL-AGLEATDDPKVA---- 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT--TTCTTE-EEEEEESCHHHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc--cccccc-CCeEeccChHHH----
Confidence 47999999999999999999998861 03888887541 11111111111 111122 466654444332
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
+...|+|||.||... .+ . ++..+.+++|+.++..+++++..+- ... .+++++|+..
T Consensus 78 ---~~~~D~Vih~Ag~~~--------~~--~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~------~~vvv~snp~ 133 (327)
T 1y7t_A 78 ---FKDADYALLVGAAPR--------KA--G---MERRDLLQVNGKIFTEQGRALAEVA--KKD------VKVLVVGNPA 133 (327)
T ss_dssp ---TTTCSEEEECCCCCC--------CT--T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTT------CEEEECSSSH
T ss_pred ---hCCCCEEEECCCcCC--------CC--C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCC------eEEEEeCCch
Confidence 236899999999642 11 1 1234578999999999999887542 011 2777777654
Q ss_pred ccc-----CCC-CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 182 GSI-----GDN-RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 182 ~~~-----~~~-~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
... ... +.+....|+.+|...+.+.+.++..+
T Consensus 134 ~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~ 171 (327)
T 1y7t_A 134 NTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT 171 (327)
T ss_dssp HHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHh
Confidence 211 111 13344579999999999988887654
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.80 E-value=8.1e-09 Score=72.69 Aligned_cols=74 Identities=20% Similarity=0.131 Sum_probs=58.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcC-CccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G-~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++++++|+|+ |++|+++++.|.+.| ++ |++++|+++..+.+. ...+..+.+|+++.+++.+++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~--v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~------- 67 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYS--VTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKAL------- 67 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEE--EEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHT-------
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCce--EEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHH-------
Confidence 4578999999 999999999999999 64 888999765544332 235677889999987776554
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
..+|++|++++
T Consensus 68 ~~~d~vi~~~~ 78 (118)
T 3ic5_A 68 GGFDAVISAAP 78 (118)
T ss_dssp TTCSEEEECSC
T ss_pred cCCCEEEECCC
Confidence 36899999996
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.66 E-value=5.4e-08 Score=83.64 Aligned_cols=83 Identities=13% Similarity=0.154 Sum_probs=67.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCC--ccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~--~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++++|+|+ |+||+++++.|+++|. . .|++++|+.++.+.+.+..... +.++..+.+|+++.+++++++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~-~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFS-HITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCC-EEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCce-EEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh----
Confidence 46899999 8999999999999983 2 4889999988777765544322 346889999999999999998876
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
++|+||||++..
T Consensus 76 -~~DvVin~ag~~ 87 (405)
T 4ina_A 76 -KPQIVLNIALPY 87 (405)
T ss_dssp -CCSEEEECSCGG
T ss_pred -CCCEEEECCCcc
Confidence 689999999843
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-10 Score=100.83 Aligned_cols=41 Identities=32% Similarity=0.371 Sum_probs=35.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA 67 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~ 67 (231)
+.+.||+++|||++ +||+++|+.|++.|++ |+++++++...
T Consensus 261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~--Viv~D~~~~~a 301 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGAR--VIVTEIDPICA 301 (488)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHHHH
T ss_pred CcccCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEcCCHHHH
Confidence 35789999999988 9999999999999996 88888876443
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=6.7e-08 Score=74.58 Aligned_cols=79 Identities=13% Similarity=0.109 Sum_probs=55.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+||||++++..+...|++ |++++++++..+.+. +.+.. ..+|.++.+..+.+.+... .+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~--V~~~~~~~~~~~~~~----~~g~~---~~~d~~~~~~~~~~~~~~~--~~ 106 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGAR--IYTTAGSDAKREMLS----RLGVE---YVGDSRSVDFADEILELTD--GY 106 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHH----TTCCS---EEEETTCSTHHHHHHHHTT--TC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----HcCCC---EEeeCCcHHHHHHHHHHhC--CC
Confidence 5789999999999999999999999996 888888765443332 22322 2358777654444333221 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 107 ~~D~vi~~~g 116 (198)
T 1pqw_A 107 GVDVVLNSLA 116 (198)
T ss_dssp CEEEEEECCC
T ss_pred CCeEEEECCc
Confidence 6999999997
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.8e-08 Score=89.40 Aligned_cols=103 Identities=23% Similarity=0.203 Sum_probs=64.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH-
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE- 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~- 103 (231)
++++|++||||| ||+|++++..|++.|++ |++++|+.++.+.+.+.. +.++. ++.+ + .+
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~--V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l-------~~~ 420 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAK--VVIANRTYERALELAEAI---GGKAL----SLTD---L-------DNY 420 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC---CEEEESSHHHHHHHHHHT---TC-CE----ETTT---T-------TTC
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHc---CCcee----eHHH---h-------hhc
Confidence 467899999999 59999999999999996 888899876666554433 22222 2221 1 11
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHH
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 149 (231)
..+.+|++|||+|....+.. ...++.+.+.+.|+..+++|+.+.
T Consensus 421 ~~~~~DilVN~agvg~~~~~--~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 421 HPEDGMVLANTTSMGMQPNV--EETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp --CCSEEEEECSSTTCTTCT--TCCSSCTTTGGGEEEEEECCCSSS
T ss_pred cccCceEEEECCCCCCCCCC--CCCCCChHHcCcCcEEEEEeeCCc
Confidence 12458999999997531110 113455566778888999998764
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=8.4e-08 Score=80.10 Aligned_cols=79 Identities=15% Similarity=0.176 Sum_probs=59.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||||++|+||++++..+.+.|++ |++++++++..+.+. +.+.. ..+|.++.+++.+.+.++.. +
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~--V~~~~~~~~~~~~~~----~~g~~---~~~d~~~~~~~~~~~~~~~~--~ 213 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKIAYLK----QIGFD---AAFNYKTVNSLEEALKKASP--D 213 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HTTCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----hcCCc---EEEecCCHHHHHHHHHHHhC--C
Confidence 5899999999999999999999999996 888888765544432 22322 23588774556555555433 5
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 214 ~~d~vi~~~g 223 (333)
T 1v3u_A 214 GYDCYFDNVG 223 (333)
T ss_dssp CEEEEEESSC
T ss_pred CCeEEEECCC
Confidence 8999999998
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1.7e-07 Score=81.58 Aligned_cols=78 Identities=19% Similarity=0.192 Sum_probs=59.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++|+++|+| +|++|+++++.|++.|++ |.+++|+.+..+.+.+.. ..+..+.+|+++.+++.++++
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~--V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~------- 67 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIK--VTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA------- 67 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCE--EEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCE--EEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------
Confidence 467899998 799999999999999986 888899865544332221 246778899999887766553
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
.+|+|||+++..
T Consensus 68 ~~DvVIn~a~~~ 79 (450)
T 1ff9_A 68 KHDLVISLIPYT 79 (450)
T ss_dssp TSSEEEECCC--
T ss_pred CCcEEEECCccc
Confidence 689999999853
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.9e-08 Score=82.57 Aligned_cols=81 Identities=19% Similarity=0.162 Sum_probs=57.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|||++ |+|++++..|++.| + |++++|+.++.+.+.+.....+.....+.+|+++. .+.
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~--V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~ 190 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-N--IIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVD 190 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-E--EEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCC
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-C--EEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHh
Confidence 5679999999997 99999999999999 7 88889987666665444322110000123455442 345
Q ss_pred cCCccEEEEccccCC
Q 026924 105 YGSLNLLINASGILS 119 (231)
Q Consensus 105 ~g~id~lv~~ag~~~ 119 (231)
++++|++|||+|...
T Consensus 191 ~~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 191 LDGVDIIINATPIGM 205 (287)
T ss_dssp CTTCCEEEECSCTTC
T ss_pred hCCCCEEEECCCCCC
Confidence 678999999999754
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.6e-07 Score=76.07 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=60.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|+||++++..+...|++ |++++++++..+.+.+ .+.. ..+|.++.+++.+.+.++.+.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~--V~~~~~~~~~~~~~~~----~g~~---~~~d~~~~~~~~~~~~~~~~~-- 237 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYR--VLGIDGGEGKEELFRS----IGGE---VFIDFTKEKDIVGAVLKATDG-- 237 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECSTTHHHHHHH----TTCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCc--EEEEcCCHHHHHHHHH----cCCc---eEEecCccHhHHHHHHHHhCC--
Confidence 5799999999999999999999999996 8888988766543332 2322 235888666676666665443
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|++|+++|.
T Consensus 238 ~~D~vi~~~g~ 248 (347)
T 2hcy_A 238 GAHGVINVSVS 248 (347)
T ss_dssp CEEEEEECSSC
T ss_pred CCCEEEECCCc
Confidence 79999999983
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.7e-07 Score=76.82 Aligned_cols=78 Identities=23% Similarity=0.178 Sum_probs=58.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++++++|+|+ |+||+++++.+...|++ |++.+++.+..+.+.+. .+.. +.+|.++.+++.+++.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~--V~~~d~~~~~~~~~~~~---~g~~---~~~~~~~~~~l~~~~~----- 228 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQ--VTILDVNHKRLQYLDDV---FGGR---VITLTATEANIKKSVQ----- 228 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---TTTS---EEEEECCHHHHHHHHH-----
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHh---cCce---EEEecCCHHHHHHHHh-----
Confidence 478899999999 89999999999999996 88999987654443322 2333 4567777777665543
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
..|++|++++..
T Consensus 229 --~~DvVi~~~g~~ 240 (369)
T 2eez_A 229 --HADLLIGAVLVP 240 (369)
T ss_dssp --HCSEEEECCC--
T ss_pred --CCCEEEECCCCC
Confidence 579999999853
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.31 E-value=9.5e-07 Score=77.15 Aligned_cols=80 Identities=18% Similarity=0.217 Sum_probs=59.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++++++|+|+ |++|++++..|++. |++ |.+++|+.++.+.+.+. ..+..+.+|+.+.+++.++++
T Consensus 19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~--V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~--- 87 (467)
T 2axq_A 19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDIN--VTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA--- 87 (467)
T ss_dssp ----CEEEEEECC-STTHHHHHHHHHTSTTEE--EEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH---
T ss_pred cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCe--EEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc---
Confidence 4667899999997 99999999999998 664 88899987665554332 135667899999887766553
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
.+|+|||+++..
T Consensus 88 ----~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 ----DNDVVISLIPYT 99 (467)
T ss_dssp ----TSSEEEECSCGG
T ss_pred ----CCCEEEECCchh
Confidence 589999999854
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.25 E-value=7.4e-07 Score=74.12 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=56.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|+||++++..+...|++ |+++++++++.+.+.+. +.. ..+|.++.+..+++.+... ..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~--V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~--~~ 208 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAK--LIGTVGTAQKAQSALKA----GAW---QVINYREEDLVERLKEITG--GK 208 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT--TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHc----CCC---EEEECCCccHHHHHHHHhC--CC
Confidence 5899999999999999999999999996 88888876554444332 322 2357776655444433321 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 209 ~~D~vi~~~g 218 (327)
T 1qor_A 209 KVRVVYDSVG 218 (327)
T ss_dssp CEEEEEECSC
T ss_pred CceEEEECCc
Confidence 6999999998
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=73.42 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=57.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|+||++++..+...|++ |+++++++++.+.+.+. +.. ..+|.++.+..+++.+.. . ..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~--Vi~~~~~~~~~~~~~~~----g~~---~~~d~~~~~~~~~i~~~~-~-~~ 213 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGAT--VIGTVSTEEKAETARKL----GCH---HTINYSTQDFAEVVREIT-G-GK 213 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHH-T-TC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHc----CCC---EEEECCCHHHHHHHHHHh-C-CC
Confidence 5789999999999999999999999996 88889886555444332 322 235777655444443322 1 13
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|++|+|+|.
T Consensus 214 ~~d~vi~~~g~ 224 (333)
T 1wly_A 214 GVDVVYDSIGK 224 (333)
T ss_dssp CEEEEEECSCT
T ss_pred CCeEEEECCcH
Confidence 69999999983
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=2e-06 Score=71.25 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=57.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC---CCCccchhhhhhc-CCCceeEEEecCCChHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN---PNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~---~~~~~~~~~~~~~-~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.++++|++||+|+ ||+|++++..|++.|++ .|.+++|+ .++.+.+.+.+.. .+ ......++.+.+++.+.+
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~-~V~i~nR~~~~~~~a~~la~~~~~~~~--~~~~~~~~~~~~~l~~~l- 224 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVK-EISIFNRKDDFYANAEKTVEKINSKTD--CKAQLFDIEDHEQLRKEI- 224 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHHHHHHHH-
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCC-EEEEEECCCchHHHHHHHHHHhhhhcC--CceEEeccchHHHHHhhh-
Confidence 3578999999998 69999999999999995 58899999 4444444443332 22 223345666654443222
Q ss_pred HHHHHcCCccEEEEccccC
Q 026924 100 SIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~ 118 (231)
...|+|||+.+..
T Consensus 225 ------~~aDiIINaTp~G 237 (315)
T 3tnl_A 225 ------AESVIFTNATGVG 237 (315)
T ss_dssp ------HTCSEEEECSSTT
T ss_pred ------cCCCEEEECccCC
Confidence 2579999998654
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.23 E-value=7.3e-07 Score=72.44 Aligned_cols=76 Identities=22% Similarity=0.159 Sum_probs=54.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|+|+ ||+|++++..|++.|++ |++++|+.++.+.+.+.....+ .+ |..+.+++ .+
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~--V~v~~R~~~~~~~la~~~~~~~-~~-----~~~~~~~~-------~~- 178 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCA--VTITNRTVSRAEELAKLFAHTG-SI-----QALSMDEL-------EG- 178 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHTGGGS-SE-----EECCSGGG-------TT-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHhhccC-Ce-----eEecHHHh-------cc-
Confidence 467899999998 69999999999999975 8889998877666554433211 22 22222221 11
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
++.|++||+++..
T Consensus 179 -~~~DivVn~t~~~ 191 (271)
T 1nyt_A 179 -HEFDLIINATSSG 191 (271)
T ss_dssp -CCCSEEEECCSCG
T ss_pred -CCCCEEEECCCCC
Confidence 6899999999865
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.1e-06 Score=63.72 Aligned_cols=76 Identities=18% Similarity=0.136 Sum_probs=53.8
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++++++|+|+ |++|+.+++.|.+.|++ |++++++++..+.+.+ .....+..|.++.+.+.++ ..
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~--v~~~d~~~~~~~~~~~------~~~~~~~~d~~~~~~l~~~------~~ 68 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHE--VLAVDINEEKVNAYAS------YATHAVIANATEENELLSL------GI 68 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCC--CEEEESCHHHHHTTTT------TCSEEEECCTTCHHHHHTT------TG
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH------hCCEEEEeCCCCHHHHHhc------CC
Confidence 45678999998 99999999999999997 7788887544333221 1234577898886554332 23
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
.+.|++|++++
T Consensus 69 ~~~d~vi~~~~ 79 (144)
T 2hmt_A 69 RNFEYVIVAIG 79 (144)
T ss_dssp GGCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899999887
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-06 Score=73.79 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=57.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|+||++++..+...|++ |+++++++++.+.+.+ +.+.. ..+|.++.+++.+.+.++.. +
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~--V~~~~~~~~~~~~~~~---~~g~~---~~~d~~~~~~~~~~~~~~~~--~ 224 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCY--VVGSAGSKEKVDLLKT---KFGFD---DAFNYKEESDLTAALKRCFP--N 224 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH---TSCCS---EEEETTSCSCSHHHHHHHCT--T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HcCCc---eEEecCCHHHHHHHHHHHhC--C
Confidence 5899999999999999999999999996 8888887655444331 22332 23477765555555555432 5
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 225 ~~d~vi~~~g 234 (345)
T 2j3h_A 225 GIDIYFENVG 234 (345)
T ss_dssp CEEEEEESSC
T ss_pred CCcEEEECCC
Confidence 7999999998
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=2.2e-06 Score=72.15 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=56.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|+||++++..+...|++ |+++++++++.+.+.+. +.. ..+|.++.+..+++.+.. ..+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~--~~~ 230 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAI--PLVTAGSQKKLQMAEKL----GAA---AGFNYKKEDFSEATLKFT--KGA 230 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHT--TTS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHc----CCc---EEEecCChHHHHHHHHHh--cCC
Confidence 4889999999999999999999999996 88889887655544222 322 235776655443333221 113
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|++|+|+|.
T Consensus 231 ~~d~vi~~~G~ 241 (354)
T 2j8z_A 231 GVNLILDCIGG 241 (354)
T ss_dssp CEEEEEESSCG
T ss_pred CceEEEECCCc
Confidence 69999999983
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.14 E-value=4e-06 Score=70.54 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=55.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|+||++++..+...|++ |+.+++++++.+.+. +.+.. ..+|.++.+..+++.+.. ...
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~----~~ga~---~~~d~~~~~~~~~~~~~~--~~~ 238 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLK--ILGTAGTEEGQKIVL----QNGAH---EVFNHREVNYIDKIKKYV--GEK 238 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HTTCS---EEEETTSTTHHHHHHHHH--CTT
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChhHHHHHH----HcCCC---EEEeCCCchHHHHHHHHc--CCC
Confidence 4789999999999999999999999996 888888866554332 22322 235777654443333222 113
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 239 ~~D~vi~~~G 248 (351)
T 1yb5_A 239 GIDIIIEMLA 248 (351)
T ss_dssp CEEEEEESCH
T ss_pred CcEEEEECCC
Confidence 7999999998
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.5e-06 Score=61.18 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=56.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.+.++|+|+ |.+|+++++.|.+.|++ |++++++++..+.+.+ ..+.++..|.++++.++++ ...
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~--V~~id~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~~------~~~ 69 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKK--VLAVDKSKEKIELLED------EGFDAVIADPTDESFYRSL------DLE 69 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHH------TTCEEEECCTTCHHHHHHS------CCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHH------CCCcEEECCCCCHHHHHhC------Ccc
Confidence 3467999998 77999999999999997 8888987655444332 2356788999998876543 234
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
+.|++|.+.+
T Consensus 70 ~~d~vi~~~~ 79 (141)
T 3llv_A 70 GVSAVLITGS 79 (141)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEEecC
Confidence 6899987775
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=2.3e-06 Score=72.09 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=55.0
Q ss_pred cC--eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KG--GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~--k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+| +++||+|++|+||++++..+...|++ .|+++++++++.+.+.+. .+.. ..+|.++.+..+ .+.+...
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~-~Vi~~~~~~~~~~~~~~~---~g~~---~~~d~~~~~~~~-~~~~~~~- 228 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCS-RVVGICGTHEKCILLTSE---LGFD---AAINYKKDNVAE-QLRESCP- 228 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHHT---SCCS---EEEETTTSCHHH-HHHHHCT-
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCC-eEEEEeCCHHHHHHHHHH---cCCc---eEEecCchHHHH-HHHHhcC-
Confidence 47 89999999999999999999999993 388888876554443321 2332 235776643332 2333221
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
+++|++|+|+|
T Consensus 229 -~~~d~vi~~~G 239 (357)
T 2zb4_A 229 -AGVDVYFDNVG 239 (357)
T ss_dssp -TCEEEEEESCC
T ss_pred -CCCCEEEECCC
Confidence 27999999998
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=3.2e-06 Score=70.49 Aligned_cols=79 Identities=13% Similarity=0.158 Sum_probs=55.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|+||++++..+...|++ |+++++++++.+.+. ++.+.. ...|.++.+..+.+.+ .. .+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~~~-~~--~~ 217 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCR--VVGIAGGAEKCRFLV---EELGFD---GAIDYKNEDLAAGLKR-EC--PK 217 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH---HTTCCS---EEEETTTSCHHHHHHH-HC--TT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHcCCC---EEEECCCHHHHHHHHH-hc--CC
Confidence 5899999999999999999999999996 888888876555441 222332 2246666543333322 22 24
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 218 ~~d~vi~~~g 227 (336)
T 4b7c_A 218 GIDVFFDNVG 227 (336)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 7999999998
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=4e-06 Score=70.30 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|++|+||++++..+... |++ |+++++++++.+.+.+. +.. ...|.++.+..+++ .++.+.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~--Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~-~~~~~~- 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGAT--IIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEI-RRITES- 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCE--EEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHH-HHHTTT-
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCe--EEEEcCCHHHHHHHHHh----CCC---EEecCCCccHHHHH-HHHhcC-
Confidence 5789999999999999999999998 996 88888877655444322 322 22466664433322 222211
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+++|++|+|+|.
T Consensus 239 ~~~d~vi~~~g~ 250 (347)
T 1jvb_A 239 KGVDAVIDLNNS 250 (347)
T ss_dssp SCEEEEEESCCC
T ss_pred CCceEEEECCCC
Confidence 589999999983
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.03 E-value=6e-06 Score=67.42 Aligned_cols=82 Identities=22% Similarity=0.186 Sum_probs=57.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|++||+|+ ||+|++++..|++.|++ .|.+.+|+.++.+.+.+........+.....+.. ++.+.+.
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~-~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~----- 193 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQ-KLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIA----- 193 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHH-----
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHh-----
Confidence 568999999998 79999999999999996 5999999988777765554432222223333432 2322222
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
..|+|||+....
T Consensus 194 --~~DiVInaTp~G 205 (283)
T 3jyo_A 194 --AADGVVNATPMG 205 (283)
T ss_dssp --HSSEEEECSSTT
T ss_pred --cCCEEEECCCCC
Confidence 369999998654
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.01 E-value=8.5e-06 Score=68.50 Aligned_cols=78 Identities=15% Similarity=0.215 Sum_probs=56.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|+||++++..+...|++ |+++++++++.+.+.+. +... ..|.++.+..+.+. +.. .+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~l----Ga~~---~~~~~~~~~~~~~~-~~~--~~ 234 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAE--VYATAGSTGKCEACERL----GAKR---GINYRSEDFAAVIK-AET--GQ 234 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHH----TCSE---EEETTTSCHHHHHH-HHH--SS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHhc----CCCE---EEeCCchHHHHHHH-HHh--CC
Confidence 5789999999999999999999999996 88999887665544432 3221 24665554333333 322 35
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 235 g~Dvvid~~g 244 (353)
T 4dup_A 235 GVDIILDMIG 244 (353)
T ss_dssp CEEEEEESCC
T ss_pred CceEEEECCC
Confidence 7999999998
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.9e-05 Score=65.89 Aligned_cols=80 Identities=24% Similarity=0.239 Sum_probs=55.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|++|++++..+...|++ |+.+++++++.+.+.+. +.+. ..|.++.+..+.+.+ .. ...
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~l----ga~~---~~~~~~~~~~~~~~~-~~-~~~ 212 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFR--LIAVTRNNKHTEELLRL----GAAY---VIDTSTAPLYETVME-LT-NGI 212 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHHH----TCSE---EEETTTSCHHHHHHH-HT-TTS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHhC----CCcE---EEeCCcccHHHHHHH-Hh-CCC
Confidence 5889999999999999999998889996 88899988776655442 3321 246555433322222 21 113
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|+|+|.
T Consensus 213 g~Dvvid~~g~ 223 (340)
T 3gms_A 213 GADAAIDSIGG 223 (340)
T ss_dssp CEEEEEESSCH
T ss_pred CCcEEEECCCC
Confidence 69999999983
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=66.66 Aligned_cols=79 Identities=14% Similarity=0.126 Sum_probs=55.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|++|++++..+...|++ |+.+++++++.+.+.+ .+... .+|.++++.. +.+.++. ...
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~--Vi~~~~~~~~~~~~~~----~ga~~---~~d~~~~~~~-~~~~~~~-~~~ 234 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGAR--VIATAGSEDKLRRAKA----LGADE---TVNYTHPDWP-KEVRRLT-GGK 234 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----HTCSE---EEETTSTTHH-HHHHHHT-TTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHh----cCCCE---EEcCCcccHH-HHHHHHh-CCC
Confidence 4789999999999999999999999996 8888888765554432 23221 2577765422 2222221 123
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+++|
T Consensus 235 ~~d~vi~~~g 244 (343)
T 2eih_A 235 GADKVVDHTG 244 (343)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 7999999998
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=2.8e-05 Score=65.57 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=51.5
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC---CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++|+++||+|+ |++|+.++..+...|++ |+++++++ ++.+.+. +.+. ..+ | ++ +-.+++ .+ .
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~~~~----~~ga--~~v--~-~~-~~~~~~-~~-~ 243 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLE--VWMANRREPTEVEQTVIE----ETKT--NYY--N-SS-NGYDKL-KD-S 243 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTCE--EEEEESSCCCHHHHHHHH----HHTC--EEE--E-CT-TCSHHH-HH-H
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCccchHHHHHHH----HhCC--cee--c-hH-HHHHHH-HH-h
Confidence 45999999999 99999999999999996 88888887 4433222 2232 223 5 44 222222 22 2
Q ss_pred HHcCCccEEEEcccc
Q 026924 103 EKYGSLNLLINASGI 117 (231)
Q Consensus 103 ~~~g~id~lv~~ag~ 117 (231)
. +++|++|+++|.
T Consensus 244 -~-~~~d~vid~~g~ 256 (366)
T 2cdc_A 244 -V-GKFDVIIDATGA 256 (366)
T ss_dssp -H-CCEEEEEECCCC
T ss_pred -C-CCCCEEEECCCC
Confidence 2 689999999984
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=3e-05 Score=64.06 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=55.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC---CCCccchhhhhh-cCCCceeEEEecCCChHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN---PNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~---~~~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.++++|++||+|+ ||.|++++..|++.|++ .|.+++|+ .++.+.+.+... ..+..+ ...+..+.+...+.
T Consensus 144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~-~v~v~nRt~~~~~~a~~la~~~~~~~~~~v--~~~~~~~l~~~~~~-- 217 (312)
T 3t4e_A 144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIK-EIKLFNRKDDFFEKAVAFAKRVNENTDCVV--TVTDLADQHAFTEA-- 217 (312)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTHHHHHHHHHHHHHHHSSCEE--EEEETTCHHHHHHH--
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHcCCC-EEEEEECCCchHHHHHHHHHHhhhccCcce--EEechHhhhhhHhh--
Confidence 3568999999998 79999999999999996 69999999 444554444332 222223 33455443222221
Q ss_pred HHHHHcCCccEEEEccccC
Q 026924 100 SIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~ 118 (231)
+ ...|+|||+.+..
T Consensus 218 -l----~~~DiIINaTp~G 231 (312)
T 3t4e_A 218 -L----ASADILTNGTKVG 231 (312)
T ss_dssp -H----HHCSEEEECSSTT
T ss_pred -c----cCceEEEECCcCC
Confidence 2 2469999988754
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=1.4e-05 Score=66.27 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=54.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|++.+..+...|++ |+.+++++++.+.+.+. +.. ...|.++.+..+.+.+.. ...
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~~~~~~--~~~ 208 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAK--LIGTVSSPEKAAHAKAL----GAW---ETIDYSHEDVAKRVLELT--DGK 208 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHT--TTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHc----CCC---EEEeCCCccHHHHHHHHh--CCC
Confidence 5889999999999999999999999996 88888877665544332 322 124665544333322221 113
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|++|+|+|
T Consensus 209 g~Dvvid~~g 218 (325)
T 3jyn_A 209 KCPVVYDGVG 218 (325)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 6999999998
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.8e-05 Score=68.57 Aligned_cols=84 Identities=23% Similarity=0.283 Sum_probs=57.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEE--ecCC---------ChHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ--LDLT---------VESTIE 95 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~--~Dls---------~~~~v~ 95 (231)
+|+++||+|++|+||++.+..+...|++ |+++++++++.+.+. +.+.....-. .|+. +.+++.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~--vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~ 293 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGI--PVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVETGR 293 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchhhh
Confidence 5899999999999999999999999997 777777665544432 2343322211 1221 123455
Q ss_pred HHHHHHHHHcC-CccEEEEccc
Q 026924 96 ASAKSIKEKYG-SLNLLINASG 116 (231)
Q Consensus 96 ~~~~~~~~~~g-~id~lv~~ag 116 (231)
++.+++.+..+ .+|++|+++|
T Consensus 294 ~~~~~v~~~~g~g~Dvvid~~G 315 (447)
T 4a0s_A 294 KLAKLVVEKAGREPDIVFEHTG 315 (447)
T ss_dssp HHHHHHHHHHSSCCSEEEECSC
T ss_pred HHHHHHHHHhCCCceEEEECCC
Confidence 56666666544 6999999998
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=66.14 Aligned_cols=79 Identities=18% Similarity=0.229 Sum_probs=54.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|+||++.+..+...|++ |+.+++++++.+.+.+ .+... ..|.++.+..+.+.+.. ...
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~ga~~---~~~~~~~~~~~~~~~~~--~~~ 216 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAH--TIAVASTDEKLKIAKE----YGAEY---LINASKEDILRQVLKFT--NGK 216 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----TTCSE---EEETTTSCHHHHHHHHT--TTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCcE---EEeCCCchHHHHHHHHh--CCC
Confidence 5889999999999999999999999996 8888887665543322 23321 24555544333222211 113
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+|+|
T Consensus 217 g~D~vid~~g 226 (334)
T 3qwb_A 217 GVDASFDSVG 226 (334)
T ss_dssp CEEEEEECCG
T ss_pred CceEEEECCC
Confidence 6999999998
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.81 E-value=8.2e-05 Score=61.27 Aligned_cols=93 Identities=16% Similarity=0.109 Sum_probs=61.7
Q ss_pred cccCeE-EEEecCCC-----------------c-hhHHHHHHHHhcCCccEEEEeecCCCCccch--------hhhhh--
Q 026924 25 KWKGGV-SLVQGASR-----------------G-IGLEFAKQLLEKNDKGCVIATCRNPNGATGL--------LDLKN-- 75 (231)
Q Consensus 25 ~~~~k~-~LVtGas~-----------------g-IG~aia~~l~~~G~~~~vi~~~r~~~~~~~~--------~~~~~-- 75 (231)
+++||. +|||+|.. | .|.++|+.+++.||+ |+++.+...-.... .+...
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~--V~lv~g~~sl~p~~r~~~~~~~~~~~~~~ 110 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG--VLFLYRARSAFPYAHRFPPQTWLSALRPS 110 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE--EEEEEETTSCCTTGGGSCHHHHHHHCEEC
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE--EEEEecCCCcCcchhccCccchhhhhccc
Confidence 467887 99998865 5 999999999999997 77766643311111 01000
Q ss_pred -cCCCceeEEEecCCChHHHHHHHHHH------------------------------HHHcCCccEEEEccccCC
Q 026924 76 -RFPERLDVLQLDLTVESTIEASAKSI------------------------------KEKYGSLNLLINASGILS 119 (231)
Q Consensus 76 -~~~~~v~~~~~Dls~~~~v~~~~~~~------------------------------~~~~g~id~lv~~ag~~~ 119 (231)
..+..+..+.+|+...+++.+.+.+. .+.++..|++|.+|+...
T Consensus 111 ~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD 185 (313)
T 1p9o_A 111 GPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD 185 (313)
T ss_dssp CC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred cccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence 01234556777887777766666543 234578999999999864
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=2.4e-05 Score=63.41 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=54.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|+|+ ||+|++++..|++.|++ |.+++|+.++.+.+.+.....+ ++. .+|+ +++. +
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~--v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~---~~~~-------~- 178 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQN--IVLANRTFSKTKELAERFQPYG-NIQ--AVSM---DSIP-------L- 178 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCE--EEEEESSHHHHHHHHHHHGGGS-CEE--EEEG---GGCC-------C-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHccccC-CeE--EeeH---HHhc-------c-
Confidence 567899999998 79999999999999975 9999999877776655443222 222 2333 1110 1
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
+..|++||+++..
T Consensus 179 -~~~DivIn~t~~~ 191 (272)
T 1p77_A 179 -QTYDLVINATSAG 191 (272)
T ss_dssp -SCCSEEEECCCC-
T ss_pred -CCCCEEEECCCCC
Confidence 4789999999865
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=6.5e-05 Score=55.40 Aligned_cols=79 Identities=13% Similarity=0.043 Sum_probs=54.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+..++.++|+|+ |.+|+.++..|.+.|++ |++++++++..+.+.+ . .....+..|..+.+.+.+.
T Consensus 15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~--V~vid~~~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~------ 80 (155)
T 2g1u_A 15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHS--VVVVDKNEYAFHRLNS---E--FSGFTVVGDAAEFETLKEC------ 80 (155)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCGGGGGGSCT---T--CCSEEEESCTTSHHHHHTT------
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHh---c--CCCcEEEecCCCHHHHHHc------
Confidence 3556788999996 89999999999999996 8888998766554321 1 1344566788776543211
Q ss_pred HcCCccEEEEccc
Q 026924 104 KYGSLNLLINASG 116 (231)
Q Consensus 104 ~~g~id~lv~~ag 116 (231)
.....|++|.+.+
T Consensus 81 ~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 81 GMEKADMVFAFTN 93 (155)
T ss_dssp TGGGCSEEEECSS
T ss_pred CcccCCEEEEEeC
Confidence 1346799998876
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.77 E-value=4.8e-05 Score=63.61 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=53.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|+++||+|++|+||++.+..+...|++ |+.+++++++.+.+.+. +.+. . .|.. +++. +++.+..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~~----ga~~-v--~~~~--~~~~---~~v~~~~~ 224 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAK--VIAVVNRTAATEFVKSV----GADI-V--LPLE--EGWA---KAVREATG 224 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHH----TCSE-E--EESS--TTHH---HHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHhc----CCcE-E--ecCc--hhHH---HHHHHHhC
Confidence 5889999999999999999999999996 88888887766544432 3221 1 2443 2332 3333332
Q ss_pred C-CccEEEEcccc
Q 026924 106 G-SLNLLINASGI 117 (231)
Q Consensus 106 g-~id~lv~~ag~ 117 (231)
+ ++|++|+++|.
T Consensus 225 ~~g~Dvvid~~g~ 237 (342)
T 4eye_A 225 GAGVDMVVDPIGG 237 (342)
T ss_dssp TSCEEEEEESCC-
T ss_pred CCCceEEEECCch
Confidence 2 69999999983
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.72 E-value=3.9e-05 Score=63.95 Aligned_cols=155 Identities=10% Similarity=-0.057 Sum_probs=87.2
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCc-----cEEEEeecC----CCCccchhhhhhcCCCceeEEEecCCChHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRN----PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~-----~~vi~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
.++++||||+|.+|.+++..|+..|.- ..|.+.|++ +++.+.....+......+. .|+...++..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~--- 78 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPM--- 78 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcH---
Confidence 357999999999999999999998851 138888887 3323322222221111111 2443333222
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+.+...|+||+.+|... .+ ..+ -.+.+..|+..+..+++.+..+-. .. +.++++|
T Consensus 79 ----~al~~aD~Vi~~ag~~~--------~~--g~~---r~dl~~~N~~i~~~i~~~i~~~~~--p~------a~ii~~S 133 (329)
T 1b8p_A 79 ----TAFKDADVALLVGARPR--------GP--GME---RKDLLEANAQIFTVQGKAIDAVAS--RN------IKVLVVG 133 (329)
T ss_dssp ----HHTTTCSEEEECCCCCC--------CT--TCC---HHHHHHHHHHHHHHHHHHHHHHSC--TT------CEEEECS
T ss_pred ----HHhCCCCEEEEeCCCCC--------CC--CCC---HHHHHHHHHHHHHHHHHHHHHhcC--CC------eEEEEcc
Confidence 22346799999999642 11 111 124578888888888887765420 11 3888888
Q ss_pred cCcccc-----CCC-CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 179 ARVGSI-----GDN-RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 179 s~~~~~-----~~~-~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
...... ... ..|....++.++.--..+.+.++..+
T Consensus 134 NPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~l 174 (329)
T 1b8p_A 134 NPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKT 174 (329)
T ss_dssp SSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHh
Confidence 644211 000 12333346666554445555555554
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00011 Score=61.51 Aligned_cols=78 Identities=10% Similarity=0.055 Sum_probs=53.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++++||+||+|++|++.+..+...|++ |+.+++++++.+.+.+. +.+. ..|.++.+..+. +.++... .+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~~----Ga~~---~~~~~~~~~~~~-v~~~~~~-~g 233 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFR--PIVTVRRDEQIALLKDI----GAAH---VLNEKAPDFEAT-LREVMKA-EQ 233 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESCGGGHHHHHHH----TCSE---EEETTSTTHHHH-HHHHHHH-HC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHc----CCCE---EEECCcHHHHHH-HHHHhcC-CC
Confidence 389999999999999999999999996 88889887766554432 3221 245555433332 2322221 36
Q ss_pred ccEEEEccc
Q 026924 108 LNLLINASG 116 (231)
Q Consensus 108 id~lv~~ag 116 (231)
+|++|+++|
T Consensus 234 ~D~vid~~g 242 (349)
T 3pi7_A 234 PRIFLDAVT 242 (349)
T ss_dssp CCEEEESSC
T ss_pred CcEEEECCC
Confidence 999999998
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.69 E-value=5e-05 Score=62.38 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=54.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|+|+ |++|++++..|++.|+. .|.+++|+.++.+.+.+........ . .+ .+ .+.+.
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~-~V~v~nR~~~ka~~la~~~~~~~~~--~--~~---~~-------~~~~~ 201 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAE-RIDMANRTVEKAERLVREGDERRSA--Y--FS---LA-------EAETR 201 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCS-EEEEECSSHHHHHHHHHHSCSSSCC--E--EC---HH-------HHHHT
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhhhccCc--e--ee---HH-------HHHhh
Confidence 467899999998 68999999999999985 5999999877766655443211101 1 11 12 23333
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|+|||+.+..
T Consensus 202 ~~~aDivIn~t~~~ 215 (297)
T 2egg_A 202 LAEYDIIINTTSVG 215 (297)
T ss_dssp GGGCSEEEECSCTT
T ss_pred hccCCEEEECCCCC
Confidence 45789999999865
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.65 E-value=6.8e-05 Score=65.17 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=58.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEE--ec--------CCChHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ--LD--------LTVESTIEA 96 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~--~D--------ls~~~~v~~ 96 (231)
.|+++||+|++|++|+..+..+...|++ |+++++++++.+.+.++ |....+-. .| ..+.+++++
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~--vi~~~~~~~~~~~~~~l----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~ 301 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGAN--PICVVSSPQKAEICRAM----GAEAIIDRNAEGYRFWKDENTQDPKEWKR 301 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHH----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCe--EEEEECCHHHHHHHHhh----CCcEEEecCcCcccccccccccchHHHHH
Confidence 5889999999999999999999889997 77777766555544332 32211110 11 234566677
Q ss_pred HHHHHHHHcC--CccEEEEccc
Q 026924 97 SAKSIKEKYG--SLNLLINASG 116 (231)
Q Consensus 97 ~~~~~~~~~g--~id~lv~~ag 116 (231)
+.+++.+..+ .+|++|.++|
T Consensus 302 ~~~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 302 FGKRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHHHhCCCCCcEEEEcCC
Confidence 7777776543 7999999998
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00012 Score=52.35 Aligned_cols=75 Identities=20% Similarity=0.238 Sum_probs=52.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++.++|+|+ |.+|..+++.|.+.|++ |++++++++..+.+.+ .. .+..+..|.++.+.+.+ .....
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~--v~~~d~~~~~~~~~~~---~~--~~~~~~~d~~~~~~l~~------~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHD--IVLIDIDKDICKKASA---EI--DALVINGDCTKIKTLED------AGIED 69 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HC--SSEEEESCTTSHHHHHH------TTTTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHH---hc--CcEEEEcCCCCHHHHHH------cCccc
Confidence 357899987 89999999999999986 8888887654433321 11 34567788887765422 12346
Q ss_pred ccEEEEccc
Q 026924 108 LNLLINASG 116 (231)
Q Consensus 108 id~lv~~ag 116 (231)
.|++|.+.+
T Consensus 70 ~d~vi~~~~ 78 (140)
T 1lss_A 70 ADMYIAVTG 78 (140)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEeeC
Confidence 899998875
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00025 Score=58.92 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=64.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcC--CccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G--~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.++++||||+|.+|..++..|++.| .+ |.+.|++++ .....++.... ..++.. +.+.++.. +.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~e--v~l~Di~~~-~~~~~dL~~~~~~~~v~~----~~~t~d~~-------~a 73 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSV--LHLYDVVNA-PGVTADISHMDTGAVVRG----FLGQQQLE-------AA 73 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEE--EEEEESSSH-HHHHHHHHTSCSSCEEEE----EESHHHHH-------HH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCE--EEEEeCCCc-HhHHHHhhcccccceEEE----EeCCCCHH-------HH
Confidence 3579999999999999999999988 54 888887764 11122222111 112222 11222222 22
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhh
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL 160 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l 160 (231)
+...|++|+++|... .+- .+. .+.+..|+..+..+.+.+..+-
T Consensus 74 l~gaDvVi~~ag~~~--------~~g--~~r---~dl~~~N~~~~~~i~~~i~~~~ 116 (326)
T 1smk_A 74 LTGMDLIIVPAGVPR--------KPG--MTR---DDLFKINAGIVKTLCEGIAKCC 116 (326)
T ss_dssp HTTCSEEEECCCCCC--------CSS--CCC---SHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEcCCcCC--------CCC--CCH---HHHHHHHHHHHHHHHHHHHhhC
Confidence 346899999999642 110 111 2347788888888888776543
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0001 Score=61.46 Aligned_cols=77 Identities=13% Similarity=0.049 Sum_probs=53.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|+.++..+...|++ |+.+++++++.+.+.+ .+.+ ..+|.++.+ +.+.+.++. +
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~-~~~~~~~~~---~ 229 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLN--VVAVDIGDEKLELAKE----LGAD---LVVNPLKED-AAKFMKEKV---G 229 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHH----TTCS---EEECTTTSC-HHHHHHHHH---S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----CCCC---EEecCCCcc-HHHHHHHHh---C
Confidence 4789999999 78999999999999996 8888887765554332 2332 225776543 322233322 6
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|++|+++|.
T Consensus 230 ~~d~vid~~g~ 240 (339)
T 1rjw_A 230 GVHAAVVTAVS 240 (339)
T ss_dssp SEEEEEESSCC
T ss_pred CCCEEEECCCC
Confidence 89999999984
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00013 Score=59.41 Aligned_cols=76 Identities=22% Similarity=0.321 Sum_probs=54.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|+|+ ||+|++++..|++.|+. .|.+.+|+.++.+.+.+.....+ .+.... . +++.
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la~~~~~~~-~~~~~~--~---~~l~--------- 185 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPA-SITVTNRTFAKAEQLAELVAAYG-EVKAQA--F---EQLK--------- 185 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCS-EEEEEESSHHHHHHHHHHHGGGS-CEEEEE--G---GGCC---------
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCC-eEEEEECCHHHHHHHHHHhhccC-CeeEee--H---HHhc---------
Confidence 568999999998 69999999999999975 58899999877777665544322 233332 2 1110
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
...|+|||+.+..
T Consensus 186 -~~aDiIInaTp~g 198 (281)
T 3o8q_A 186 -QSYDVIINSTSAS 198 (281)
T ss_dssp -SCEEEEEECSCCC
T ss_pred -CCCCEEEEcCcCC
Confidence 3689999988754
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.60 E-value=8.9e-05 Score=60.75 Aligned_cols=72 Identities=21% Similarity=0.235 Sum_probs=51.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|++|++|++++..+...|++ |+.+++++++.+.+.+ .+.+. ..|.++ .+ +.+++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~ga~~---~~~~~~~~~----~~~~~---- 187 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLR--VLAAASRPEKLALPLA----LGAEE---AATYAEVPE----RAKAW---- 187 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSGGGSHHHHH----TTCSE---EEEGGGHHH----HHHHT----
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHh----cCCCE---EEECCcchh----HHHHh----
Confidence 5889999999999999999999999996 8888988766554432 23221 235544 22 22222
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
+++|++|+ +|
T Consensus 188 ~~~d~vid-~g 197 (302)
T 1iz0_A 188 GGLDLVLE-VR 197 (302)
T ss_dssp TSEEEEEE-CS
T ss_pred cCceEEEE-CC
Confidence 57999999 87
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.58 E-value=9.1e-05 Score=54.44 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=54.5
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.++|+|+ |.+|+.+++.|.+.|++ |++++++. +..+.+.+. ....+.++..|.++++.+.++ ...
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~--V~vid~~~~~~~~~~~~~---~~~~~~~i~gd~~~~~~l~~a------~i~ 70 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQN--VTVISNLPEDDIKQLEQR---LGDNADVIPGDSNDSSVLKKA------GID 70 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCCHHHHHHHHHH---HCTTCEEEESCTTSHHHHHHH------TTT
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCC--EEEEECCChHHHHHHHHh---hcCCCeEEEcCCCCHHHHHHc------Chh
Confidence 456888986 89999999999999997 88888864 322233222 134577889999998765432 234
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
..|.+|.+.+
T Consensus 71 ~ad~vi~~~~ 80 (153)
T 1id1_A 71 RCRAILALSD 80 (153)
T ss_dssp TCSEEEECSS
T ss_pred hCCEEEEecC
Confidence 6788887765
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=7.8e-05 Score=62.82 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=53.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|+.++..+...|++ |+.+++++++.+.+.+ .+... ..|.++.+ +.+.+.+.. .+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~~----~Ga~~---~~~~~~~~-~~~~~~~~~--~~ 230 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCH--VIGTCSSDEKSAFLKS----LGCDR---PINYKTEP-VGTVLKQEY--PE 230 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----TTCSE---EEETTTSC-HHHHHHHHC--TT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHH----cCCcE---EEecCChh-HHHHHHHhc--CC
Confidence 5789999999999999999999999996 8888887655444332 23321 23554432 333333321 14
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|+++|
T Consensus 231 g~D~vid~~g 240 (362)
T 2c0c_A 231 GVDVVYESVG 240 (362)
T ss_dssp CEEEEEECSC
T ss_pred CCCEEEECCC
Confidence 6999999998
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.56 E-value=8.3e-05 Score=60.28 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=54.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++|+++|+|+ ||.|++++..|++.|+. .|.+++|+.++.+.+.+.... ..+... +.. ++. +
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~-~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~---~l~-------~- 179 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPS-ELVIANRDMAKALALRNELDH--SRLRIS--RYE---ALE-------G- 179 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCS-EEEEECSCHHHHHHHHHHHCC--TTEEEE--CSG---GGT-------T-
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHH---Hhc-------c-
Confidence 568999999998 69999999999999975 599999998777776655433 223332 221 111 1
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
...|+|||+.+..
T Consensus 180 -~~~DivInaTp~g 192 (272)
T 3pwz_A 180 -QSFDIVVNATSAS 192 (272)
T ss_dssp -CCCSEEEECSSGG
T ss_pred -cCCCEEEECCCCC
Confidence 3689999987653
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00028 Score=58.33 Aligned_cols=106 Identities=16% Similarity=0.064 Sum_probs=64.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeec--CCCCccc----hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR--NPNGATG----LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r--~~~~~~~----~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++||||+|.+|.+++..|+..|....+.+.|+ +++..+. +.+.....+.++.....| | .+.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d---------~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D---------ENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T---------TCGG
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c---------chHH
Confidence 589999999999999999999886434888887 5432322 111111111222222211 0 0122
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
.+...|+||+.||... .+- .+. .+.+..|+..+..+.+.+..+
T Consensus 71 al~gaD~Vi~~Ag~~~--------~~g--~~r---~dl~~~N~~i~~~i~~~i~~~ 113 (313)
T 1hye_A 71 IIDESDVVIITSGVPR--------KEG--MSR---MDLAKTNAKIVGKYAKKIAEI 113 (313)
T ss_dssp GGTTCSEEEECCSCCC--------CTT--CCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCC--------CCC--CcH---HHHHHHHHHHHHHHHHHHHHh
Confidence 3457899999999642 111 111 245889999998888888765
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00017 Score=60.34 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=52.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|++.+..+...|++ |+.+++++++.+.+.+. +.+. ..|..+ ++.+.+.++ ..+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~--~~~~~~~~~--~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLR--VITTASRNETIEWTKKM----GADI---VLNHKE--SLLNQFKTQ--GIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEECCSHHHHHHHHHH----TCSE---EECTTS--CHHHHHHHH--TCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHhc----CCcE---EEECCc--cHHHHHHHh--CCC
Confidence 5899999999999999999999999996 88888877655544332 3221 134432 222222222 224
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|++|+++|
T Consensus 217 g~Dvv~d~~g 226 (346)
T 3fbg_A 217 LVDYVFCTFN 226 (346)
T ss_dssp CEEEEEESSC
T ss_pred CccEEEECCC
Confidence 6999999988
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00015 Score=61.15 Aligned_cols=78 Identities=23% Similarity=0.202 Sum_probs=54.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++++++|+|+ |++|++++..+...|++ |++.+|+.++.+.+.+... ..+.. +..+.+++.+ .+
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~--V~v~dr~~~r~~~~~~~~~---~~~~~---~~~~~~~~~~---~~--- 228 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQ--VQIFDINVERLSYLETLFG---SRVEL---LYSNSAEIET---AV--- 228 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHG---GGSEE---EECCHHHHHH---HH---
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHhhC---ceeEe---eeCCHHHHHH---HH---
Confidence 356789999999 99999999999999996 8999998776665544322 12211 2233333322 22
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
...|++|++++..
T Consensus 229 -~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 229 -AEADLLIGAVLVP 241 (361)
T ss_dssp -HTCSEEEECCCCT
T ss_pred -cCCCEEEECCCcC
Confidence 2689999999853
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00025 Score=51.29 Aligned_cols=76 Identities=12% Similarity=0.121 Sum_probs=55.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++++ .++|.|+ |.+|+.+++.|.+.|++ |++++++++..+.+.+ ..+..+..|.++++.++++ .
T Consensus 5 ~~~~-~viIiG~-G~~G~~la~~L~~~g~~--v~vid~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a------~ 68 (140)
T 3fwz_A 5 DICN-HALLVGY-GRVGSLLGEKLLASDIP--LVVIETSRTRVDELRE------RGVRAVLGNAANEEIMQLA------H 68 (140)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHH------TTCEEEESCTTSHHHHHHT------T
T ss_pred cCCC-CEEEECc-CHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHH------cCCCEEECCCCCHHHHHhc------C
Confidence 4444 4778886 78999999999999997 8888998766554332 2456788999998765442 2
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
....|++|.+.+
T Consensus 69 i~~ad~vi~~~~ 80 (140)
T 3fwz_A 69 LECAKWLILTIP 80 (140)
T ss_dssp GGGCSEEEECCS
T ss_pred cccCCEEEEECC
Confidence 235788887665
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00012 Score=61.83 Aligned_cols=72 Identities=22% Similarity=0.134 Sum_probs=54.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.++++|.|+ |++|+.+++.|++. ++ |.+.+++.+.++.+. ..+..+.+|+.|.+++.++++ .
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~-~~--v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-------~ 77 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDE-FD--VYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-------E 77 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT-SE--EEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-------T
T ss_pred ccEEEEECC-CHHHHHHHHHHhcC-CC--eEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-------C
Confidence 446999998 99999999999764 55 888888765544432 345667899999988776654 4
Q ss_pred ccEEEEcccc
Q 026924 108 LNLLINASGI 117 (231)
Q Consensus 108 id~lv~~ag~ 117 (231)
.|+||++++.
T Consensus 78 ~DvVi~~~p~ 87 (365)
T 3abi_A 78 FELVIGALPG 87 (365)
T ss_dssp CSEEEECCCG
T ss_pred CCEEEEecCC
Confidence 6999999874
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=9.6e-05 Score=60.03 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=37.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
++++|+++|+|+ ||.|++++..|++.|++ .|.+++|+.++.+.+.
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la 158 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRP-TLTVANRTMSRFNNWS 158 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCS-CCEEECSCGGGGTTCC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHH
Confidence 567899999997 69999999999999994 4888899987666543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00025 Score=56.64 Aligned_cols=39 Identities=15% Similarity=0.110 Sum_probs=34.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++++++|.|+ ||+|..+++.|++.|.. .+.++|++.
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~-~i~lvD~d~ 65 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDT 65 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCB
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcCCC-eEEEEcCCC
Confidence 4678899999997 59999999999999986 688899876
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00047 Score=56.33 Aligned_cols=91 Identities=11% Similarity=0.065 Sum_probs=57.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC------------------CccchhhhhhcCC--CceeE
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------------GATGLLDLKNRFP--ERLDV 83 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~------------------~~~~~~~~~~~~~--~~v~~ 83 (231)
.++++++|+|.|++ |+|..+++.|++.|.. ++.++|.+.- +.+.+.+.+.... .++..
T Consensus 32 ~kL~~~~VlVvGaG-GlGs~va~~La~aGVG-~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~ 109 (292)
T 3h8v_A 32 EKIRTFAVAIVGVG-GVGSVTAEMLTRCGIG-KLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV 109 (292)
T ss_dssp CGGGGCEEEEECCS-HHHHHHHHHHHHHTCS-EEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCeEEEECcC-HHHHHHHHHHHHcCCC-EEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence 46788999999875 8999999999999987 8999887652 2222222222222 25556
Q ss_pred EEecCCChHHHHHHHHHHHHH----cCCccEEEEccc
Q 026924 84 LQLDLTVESTIEASAKSIKEK----YGSLNLLINASG 116 (231)
Q Consensus 84 ~~~Dls~~~~v~~~~~~~~~~----~g~id~lv~~ag 116 (231)
+..++++.+.+..+++.+... ....|+||.+..
T Consensus 110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 666666655565555543221 125677775543
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00019 Score=60.84 Aligned_cols=78 Identities=19% Similarity=0.112 Sum_probs=55.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++++++|+|+ |+||+.+++.+...|++ |++.+++.+..+.+.+. .+..+ .+|.++.+++.+++.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~--V~~~d~~~~~l~~~~~~---~g~~~---~~~~~~~~~l~~~l~----- 230 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGAT--VTVLDINIDKLRQLDAE---FCGRI---HTRYSSAYELEGAVK----- 230 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---TTTSS---EEEECCHHHHHHHHH-----
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHh---cCCee---EeccCCHHHHHHHHc-----
Confidence 578999999998 99999999999999996 88999987655444332 23332 234444555444332
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
..|++|++++..
T Consensus 231 --~aDvVi~~~~~p 242 (377)
T 2vhw_A 231 --RADLVIGAVLVP 242 (377)
T ss_dssp --HCSEEEECCCCT
T ss_pred --CCCEEEECCCcC
Confidence 579999998753
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00023 Score=59.38 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=50.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|++.+..+...|++ |+.+ +++++.+.+. +.+... +| .+. ++.+.+.+... ..
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~--Vi~~-~~~~~~~~~~----~lGa~~----i~-~~~-~~~~~~~~~~~-~~ 215 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGAR--VFAT-ARGSDLEYVR----DLGATP----ID-ASR-EPEDYAAEHTA-GQ 215 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEE-ECHHHHHHHH----HHTSEE----EE-TTS-CHHHHHHHHHT-TS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEE-eCHHHHHHHH----HcCCCE----ec-cCC-CHHHHHHHHhc-CC
Confidence 5889999999999999999999999997 7777 6554433332 223322 45 333 33333333321 23
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|.++|
T Consensus 216 g~D~vid~~g 225 (343)
T 3gaz_A 216 GFDLVYDTLG 225 (343)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 6999999998
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00062 Score=55.95 Aligned_cols=103 Identities=14% Similarity=0.052 Sum_probs=63.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeec--CCCCccchhhhhhc---CCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR--NPNGATGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r--~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||||+|.+|.+++..|+..|....+.+.|+ +++.++.....+.. ...++.... | +. +.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence 689999999999999999998886434888888 54433321111111 122333222 2 12 12
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
+...|++|+.+|... .+ ..+. .+.+..|+..+..+.+.+..+
T Consensus 68 ~~~aDvVi~~ag~~~--------~~--g~~r---~dl~~~N~~i~~~i~~~i~~~ 109 (303)
T 1o6z_A 68 TAGSDVVVITAGIPR--------QP--GQTR---IDLAGDNAPIMEDIQSSLDEH 109 (303)
T ss_dssp GTTCSEEEECCCCCC--------CT--TCCH---HHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCCEEEEcCCCCC--------CC--CCCH---HHHHHHHHHHHHHHHHHHHHH
Confidence 347899999999642 11 1111 235788888888888877654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00042 Score=58.56 Aligned_cols=77 Identities=18% Similarity=0.292 Sum_probs=50.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|+..+..+...|++ |+.++ ++++.+.+ ++.+.+. ..|.++.+.. +++.+ .+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~--Vi~~~-~~~~~~~~----~~lGa~~---v~~~~~~~~~----~~~~~-~~ 247 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAH--VTAVC-SQDASELV----RKLGADD---VIDYKSGSVE----EQLKS-LK 247 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEE-CGGGHHHH----HHTTCSE---EEETTSSCHH----HHHHT-SC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEe-ChHHHHHH----HHcCCCE---EEECCchHHH----HHHhh-cC
Confidence 5889999999999999999888889996 77766 33332222 2334322 2355554322 23332 25
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
++|++|.++|..
T Consensus 248 g~D~vid~~g~~ 259 (375)
T 2vn8_A 248 PFDFILDNVGGS 259 (375)
T ss_dssp CBSEEEESSCTT
T ss_pred CCCEEEECCCCh
Confidence 799999999853
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00047 Score=57.91 Aligned_cols=84 Identities=11% Similarity=-0.013 Sum_probs=57.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|+..+..+...|++ .|+.+++++++.+.+.+. ...+..+..|-.+.+++.+.+.++.. ..
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~l----~~~~~~~~~~~~~~~~~~~~v~~~t~-g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGAC-PLVITDIDEGRLKFAKEI----CPEVVTHKVERLSAEESAKKIVESFG-GI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHH----CTTCEEEECCSCCHHHHHHHHHHHTS-SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHh----chhcccccccccchHHHHHHHHHHhC-CC
Confidence 4789999998 99999999888889996 588888877665544433 34555555665555554433333221 23
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 252 g~Dvvid~~g~ 262 (363)
T 3m6i_A 252 EPAVALECTGV 262 (363)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00041 Score=57.82 Aligned_cols=77 Identities=19% Similarity=0.234 Sum_probs=52.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCC-ccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|+ |++|+..+..+...|+ + |+.+++++++.+.+.+. . .. ..|..++ ++.+.+.++. .
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~~~l-a---~~----v~~~~~~-~~~~~~~~~~--~ 229 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGP--ILVSDPNPYRLAFARPY-A---DR----LVNPLEE-DLLEVVRRVT--G 229 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCS--EEEECSCHHHHGGGTTT-C---SE----EECTTTS-CHHHHHHHHH--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHHh-H---Hh----ccCcCcc-CHHHHHHHhc--C
Confidence 6889999999 9999999998888999 6 88888876555443332 1 11 2455543 3333333332 3
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+++|++|.++|.
T Consensus 230 ~g~D~vid~~g~ 241 (343)
T 2dq4_A 230 SGVEVLLEFSGN 241 (343)
T ss_dssp SCEEEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 469999999983
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00026 Score=58.60 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=48.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++||+|++|++|+..+..+...|++ |+.+++++++.+.+.+ .+.+. ..|..+.+ .+.++++. .+++|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~--vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~--~~~~~~~~--~~~~d 218 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYT--VEASTGKAAEHDYLRV----LGAKE---VLAREDVM--AERIRPLD--KQRWA 218 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCTTCHHHHHH----TTCSE---EEECC-----------CC--SCCEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH----cCCcE---EEecCCcH--HHHHHHhc--CCccc
Confidence 7999999999999999988889997 8888888776655433 23321 13544432 12222221 24699
Q ss_pred EEEEcccc
Q 026924 110 LLINASGI 117 (231)
Q Consensus 110 ~lv~~ag~ 117 (231)
++|.++|.
T Consensus 219 ~vid~~g~ 226 (328)
T 1xa0_A 219 AAVDPVGG 226 (328)
T ss_dssp EEEECSTT
T ss_pred EEEECCcH
Confidence 99999983
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00037 Score=52.65 Aligned_cols=78 Identities=18% Similarity=0.089 Sum_probs=54.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++.++.++|.|+ |.+|..+++.|.+. |++ |++++++++..+.+.+ ..+..+..|.++++.+.++ .
T Consensus 36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~--V~vid~~~~~~~~~~~------~g~~~~~gd~~~~~~l~~~-----~ 101 (183)
T 3c85_A 36 NPGHAQVLILGM-GRIGTGAYDELRARYGKI--SLGIEIREEAAQQHRS------EGRNVISGDATDPDFWERI-----L 101 (183)
T ss_dssp CCTTCSEEEECC-SHHHHHHHHHHHHHHCSC--EEEEESCHHHHHHHHH------TTCCEEECCTTCHHHHHTB-----C
T ss_pred CCCCCcEEEECC-CHHHHHHHHHHHhccCCe--EEEEECCHHHHHHHHH------CCCCEEEcCCCCHHHHHhc-----c
Confidence 455777899985 89999999999999 997 8888988755443321 1345677898887644321 0
Q ss_pred HcCCccEEEEccc
Q 026924 104 KYGSLNLLINASG 116 (231)
Q Consensus 104 ~~g~id~lv~~ag 116 (231)
.....|++|.+.+
T Consensus 102 ~~~~ad~vi~~~~ 114 (183)
T 3c85_A 102 DTGHVKLVLLAMP 114 (183)
T ss_dssp SCCCCCEEEECCS
T ss_pred CCCCCCEEEEeCC
Confidence 1346899987765
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00084 Score=56.53 Aligned_cols=75 Identities=19% Similarity=0.186 Sum_probs=52.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|+..+..+...|++ |+++++++++.+.+.+ +.+.+ ...|..+.+.+. +..+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~-------~~~~ 250 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSK--VTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQ-------AAAG 250 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHH-------HTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHH-------HhhC
Confidence 6889999996 89999999999899996 8888887765444331 23332 124666543322 2235
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 251 ~~D~vid~~g~ 261 (366)
T 1yqd_A 251 TLDGIIDTVSA 261 (366)
T ss_dssp CEEEEEECCSS
T ss_pred CCCEEEECCCc
Confidence 79999999984
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00085 Score=56.59 Aligned_cols=80 Identities=18% Similarity=0.195 Sum_probs=53.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .+.. ...|.++ .+++.+.+.++..
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~~-- 260 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKMTN-- 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHHHT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHHhC--
Confidence 4789999995 89999999888889995 48888888766554432 2322 1135443 1234444444332
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 261 ~g~D~vid~~g~ 272 (374)
T 1cdo_A 261 GGVDFSLECVGN 272 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999983
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00094 Score=56.03 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=50.4
Q ss_pred cC-eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCCh--HHHHHHHHHHHH
Q 026924 27 KG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE--STIEASAKSIKE 103 (231)
Q Consensus 27 ~~-k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~--~~v~~~~~~~~~ 103 (231)
.| .++||+|++|++|...+..+...|++ ++.+.++.+..+...+..++.+.+.. .|..+. +++.+.+.++..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~~~~~~~~~~~~lGa~~v---i~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFN--SISVIRDRPNLDEVVASLKELGATQV---ITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCE--EEEEECCCTTHHHHHHHHHHHTCSEE---EEHHHHHCGGGHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCccccHHHHHHHHhcCCeEE---EecCccchHHHHHHHHHHhh
Confidence 47 89999999999999998888888997 77777666542221122223343211 222210 122222222220
Q ss_pred -HcCCccEEEEcccc
Q 026924 104 -KYGSLNLLINASGI 117 (231)
Q Consensus 104 -~~g~id~lv~~ag~ 117 (231)
..+++|++|.++|.
T Consensus 241 ~~~~g~Dvvid~~G~ 255 (364)
T 1gu7_A 241 QSGGEAKLALNCVGG 255 (364)
T ss_dssp HHTCCEEEEEESSCH
T ss_pred ccCCCceEEEECCCc
Confidence 12479999999983
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00066 Score=57.10 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=52.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|+++||+| +|++|...+..+...|++ |+.+++++++.+.+.+. +.+. ..| .+.+++.+.+.++.. ..
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~l----Ga~~---vi~-~~~~~~~~~v~~~~~-g~ 256 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAE--VIVTSSSREKLDRAFAL----GADH---GIN-RLEEDWVERVYALTG-DR 256 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH----TCSE---EEE-TTTSCHHHHHHHHHT-TC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCE--EEEEecCchhHHHHHHc----CCCE---EEc-CCcccHHHHHHHHhC-CC
Confidence 478999999 889999999888889996 88888877655543332 3321 235 443444433333322 12
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|.++|
T Consensus 257 g~D~vid~~g 266 (363)
T 3uog_A 257 GADHILEIAG 266 (363)
T ss_dssp CEEEEEEETT
T ss_pred CceEEEECCC
Confidence 6999999998
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00098 Score=56.20 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=53.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .+... ..|.++ .+++.+.+.++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~~~~~~~~-- 259 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKAKE----VGATE---CVNPQDYKKPIQEVLTEMSN-- 259 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCSE---EECGGGCSSCHHHHHHHHTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCce---EecccccchhHHHHHHHHhC--
Confidence 4789999995 89999999988889995 48888888766554432 23221 134443 1234333443322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 260 ~g~D~vid~~g~ 271 (374)
T 2jhf_A 260 GGVDFSFEVIGR 271 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEECCCC
Confidence 479999999983
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00059 Score=56.97 Aligned_cols=77 Identities=16% Similarity=0.140 Sum_probs=52.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCC-ccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~-~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|+ |++|+..+..+...|+ + |+.+++++++.+.+.+ .+.+ ...|..+++ +. +++.+..
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~-~~---~~v~~~~ 232 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYP--VIVSEPSDFRRELAKK----VGAD---YVINPFEED-VV---KEVMDIT 232 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCS--EEEECSCHHHHHHHHH----HTCS---EEECTTTSC-HH---HHHHHHT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHH----hCCC---EEECCCCcC-HH---HHHHHHc
Confidence 6889999999 9999999999988999 6 8888887655443332 2322 124555433 22 2333322
Q ss_pred --CCccEEEEcccc
Q 026924 106 --GSLNLLINASGI 117 (231)
Q Consensus 106 --g~id~lv~~ag~ 117 (231)
..+|++|.++|.
T Consensus 233 ~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA 246 (348)
T ss_dssp TTSCEEEEEECSCC
T ss_pred CCCCCCEEEECCCC
Confidence 269999999983
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0014 Score=55.36 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=52.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
.|+++||+|+ |++|+..+..+...|++ .|+.+++++++.+.+.+ .+... ..|.++ .+++.+.+.++..
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~v~~~~~-- 263 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGAS-RIIAIDINGEKFPKAKA----LGATD---CLNPRELDKPVQDVITELTA-- 263 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCSE---EECGGGCSSCHHHHHHHHHT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCcE---EEccccccchHHHHHHHHhC--
Confidence 4789999996 89999999888889995 48888888766554432 23321 134443 1234333444332
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 264 ~g~Dvvid~~G~ 275 (376)
T 1e3i_A 264 GGVDYSLDCAGT 275 (376)
T ss_dssp SCBSEEEESSCC
T ss_pred CCccEEEECCCC
Confidence 479999999983
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00079 Score=56.50 Aligned_cols=75 Identities=11% Similarity=0.078 Sum_probs=52.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|+..+..+...|++ |+.+++++++.+.+.+. +... ..|..+..+ +.+++. +
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~--Vi~~~~~~~~~~~~~~l----Ga~~---v~~~~~~~~---~~~~~~---~ 242 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAE--TYVISRSSRKREDAMKM----GADH---YIATLEEGD---WGEKYF---D 242 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHHH----TCSE---EEEGGGTSC---HHHHSC---S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHc----CCCE---EEcCcCchH---HHHHhh---c
Confidence 4789999999 99999999888889996 88999988776654432 3221 134433301 122222 5
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|++|.++|.
T Consensus 243 ~~D~vid~~g~ 253 (360)
T 1piw_A 243 TFDLIVVCASS 253 (360)
T ss_dssp CEEEEEECCSC
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.001 Score=55.63 Aligned_cols=81 Identities=22% Similarity=0.176 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHH-H
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKE-K 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~-~ 104 (231)
+|+++||+|+ |++|+..+..+...|++ |+.+++++++.+.+.+ .+.+ ...|.++ .+..+++.+...+ .
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAF--VVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhcccc
Confidence 5789999997 89999999888889997 8888887665544332 2333 1235543 3323222222110 0
Q ss_pred cCCccEEEEcccc
Q 026924 105 YGSLNLLINASGI 117 (231)
Q Consensus 105 ~g~id~lv~~ag~ 117 (231)
.+++|++|.++|.
T Consensus 238 g~g~D~vid~~g~ 250 (352)
T 1e3j_A 238 GDLPNVTIDCSGN 250 (352)
T ss_dssp SSCCSEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 2469999999983
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0011 Score=55.82 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=52.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|+ |++|+..+..+...|++ .|+.+++++++.+.+.+. +... ..|.++ .+++.+.+.++..
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~-~Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~~~~~~v~~~~~-- 258 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGAS-RIIGVDINKDKFARAKEF----GATE---CINPQDFSKPIQEVLIEMTD-- 258 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHHH----TCSE---EECGGGCSSCHHHHHHHHTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHc----CCce---EeccccccccHHHHHHHHhC--
Confidence 4789999996 89999999888889995 488888887765544332 3221 134433 1234333333322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 259 ~g~D~vid~~g~ 270 (373)
T 2fzw_A 259 GGVDYSFECIGN 270 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCc
Confidence 479999999983
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0013 Score=54.64 Aligned_cols=76 Identities=9% Similarity=0.062 Sum_probs=52.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|...+..+...|++ |+.+++++++.+.+.+ .+.+. ..|..+.+..+. +.+..+
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~~----~~~~~g 231 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLR--VAAVDIDDAKLNLARR----LGAEV---AVNARDTDPAAW----LQKEIG 231 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH----TTCSE---EEETTTSCHHHH----HHHHHS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHH----cCCCE---EEeCCCcCHHHH----HHHhCC
Confidence 5789999997 89999999888889996 8888887766554333 23322 245555443332 222346
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|++|.++|
T Consensus 232 ~~d~vid~~g 241 (340)
T 3s2e_A 232 GAHGVLVTAV 241 (340)
T ss_dssp SEEEEEESSC
T ss_pred CCCEEEEeCC
Confidence 8999999887
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00078 Score=56.94 Aligned_cols=80 Identities=13% Similarity=0.151 Sum_probs=53.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|.++||+|+ |++|+..+..+...|++ .|+.+++++++.+.+.+ .+... ..|..+ .+++.+.+.++..
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~i~~~~~-- 261 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGAS-RIIGIDIDSKKYETAKK----FGVNE---FVNPKDHDKPIQEVIVDLTD-- 261 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCS-CEEEECSCTTHHHHHHT----TTCCE---EECGGGCSSCHHHHHHHHTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----cCCcE---EEccccCchhHHHHHHHhcC--
Confidence 4789999998 89999999888889994 48888988877664432 23221 234432 2334333443322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 262 gg~D~vid~~g~ 273 (378)
T 3uko_A 262 GGVDYSFECIGN 273 (378)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999983
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00013 Score=53.10 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=48.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++++|.|+ |++|+.++..|.+.|++ |.+.+|+.+..+.+.+.. +..+ .+..+. .+++ ..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~--v~v~~r~~~~~~~~a~~~---~~~~----~~~~~~---~~~~-------~~ 80 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK--VTVAGRNIDHVRAFAEKY---EYEY----VLINDI---DSLI-------KN 80 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE--EEEEESCHHHHHHHHHHH---TCEE----EECSCH---HHHH-------HT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEcCCHHHHHHHHHHh---CCce----EeecCH---HHHh-------cC
Confidence 789999996 89999999999999986 888899877665544332 2111 122222 2222 25
Q ss_pred ccEEEEcccc
Q 026924 108 LNLLINASGI 117 (231)
Q Consensus 108 id~lv~~ag~ 117 (231)
.|++|++.+.
T Consensus 81 ~Divi~at~~ 90 (144)
T 3oj0_A 81 NDVIITATSS 90 (144)
T ss_dssp CSEEEECSCC
T ss_pred CCEEEEeCCC
Confidence 7999998874
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0023 Score=51.11 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=33.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++++++|.|+ ||+|.++++.|++.|.. .+.++|.+.
T Consensus 24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg-~i~lvD~d~ 62 (251)
T 1zud_1 24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVG-TLVLADDDD 62 (251)
T ss_dssp HHHHTCEEEEECC-STTHHHHHHHHHHTTCS-EEEEECCCB
T ss_pred HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCC-eEEEEeCCC
Confidence 4678899999998 57999999999999997 788887754
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0018 Score=53.94 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=34.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++++++++|.|++ |+|.++++.|+..|.. ++.++|++.
T Consensus 31 kL~~~~VlIvGaG-GlGs~va~~La~aGVg-~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCS-HHHHHHHHHHHHTTCC-EEEEECCCB
T ss_pred HHhCCEEEEECCC-HHHHHHHHHHHHcCCC-EEEEecCCE
Confidence 6789999999985 8999999999999998 899988864
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0013 Score=55.21 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=52.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|.++||+|+ |++|...+..+... |++ |+.+++++++.+.+.+ .+.+. ..|.++. +.+.+.++.. .
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~--~~~~v~~~~~-g 252 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPAT--VIALDVKEEKLKLAER----LGADH---VVDARRD--PVKQVMELTR-G 252 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCE--EEEEESSHHHHHHHHH----TTCSE---EEETTSC--HHHHHHHHTT-T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCe--EEEEeCCHHHHHHHHH----hCCCE---EEeccch--HHHHHHHHhC-C
Confidence 5789999999 89999998888778 996 8888887665544332 33321 2355543 3333333321 1
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
.++|++|.++|.
T Consensus 253 ~g~Dvvid~~G~ 264 (359)
T 1h2b_A 253 RGVNVAMDFVGS 264 (359)
T ss_dssp CCEEEEEESSCC
T ss_pred CCCcEEEECCCC
Confidence 269999999984
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.002 Score=51.99 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=36.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
+|+++|+|+ ||.|++++..|++.|. .|.+.+|+.++.+.+.
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~--~v~V~nRt~~ka~~la 158 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGL--QVSVLNRSSRGLDFFQ 158 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCTTHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence 789999997 8999999999999996 4999999998877765
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0015 Score=50.66 Aligned_cols=73 Identities=7% Similarity=0.138 Sum_probs=50.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
.++|+|+ |.+|..+++.|.+.|++ |++++++++..+.+.+. .++.++..|.++++.++++ .....|
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~--v~vid~~~~~~~~l~~~-----~~~~~i~gd~~~~~~l~~a------~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYG--VVIINKDRELCEEFAKK-----LKATIIHGDGSHKEILRDA------EVSKND 67 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHHH-----SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHHH-----cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence 4899996 89999999999999997 88889887655543321 1355677888877654422 123567
Q ss_pred EEEEccc
Q 026924 110 LLINASG 116 (231)
Q Consensus 110 ~lv~~ag 116 (231)
++|.+.+
T Consensus 68 ~vi~~~~ 74 (218)
T 3l4b_C 68 VVVILTP 74 (218)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 7765554
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00096 Score=57.06 Aligned_cols=44 Identities=27% Similarity=0.369 Sum_probs=36.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+++|++++|.|+ |++|+.++..|...|++ .|++++|+.++.+.+
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~-~V~v~~r~~~ra~~l 207 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR-AVLVANRTYERAVEL 207 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHH
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHH
Confidence 367999999998 89999999999999994 489999987654433
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0026 Score=53.64 Aligned_cols=77 Identities=19% Similarity=0.182 Sum_probs=50.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH-c
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-Y 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~-~ 105 (231)
+|+++||+|++|++|...+..+...|++ |+.+. ++++.+ ..++.|... ..|.++.+ +. +++++. .
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~--Vi~~~-~~~~~~----~~~~lGa~~---vi~~~~~~-~~---~~v~~~t~ 229 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYI--PIATC-SPHNFD----LAKSRGAEE---VFDYRAPN-LA---QTIRTYTK 229 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEE-CGGGHH----HHHHTTCSE---EEETTSTT-HH---HHHHHHTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCE--EEEEe-CHHHHH----HHHHcCCcE---EEECCCch-HH---HHHHHHcc
Confidence 6889999999999999999998889997 66654 443333 223334321 23555543 22 333332 2
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+++|++|.++|.
T Consensus 230 g~~d~v~d~~g~ 241 (371)
T 3gqv_A 230 NNLRYALDCITN 241 (371)
T ss_dssp TCCCEEEESSCS
T ss_pred CCccEEEECCCc
Confidence 469999999984
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0033 Score=52.62 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=51.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC--ChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT--VESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls--~~~~v~~~~~~~~~~ 104 (231)
+|.++||+|+ |++|+..+..+...|++ .|+.+++++++.+.+. +.+.. ...|.. +.++. .+++.+.
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~----~lGa~---~vi~~~~~~~~~~---~~~i~~~ 238 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVTDLSATRLSKAK----EIGAD---LVLQISKESPQEI---ARKVEGQ 238 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHH----HTTCS---EEEECSSCCHHHH---HHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHH----HhCCC---EEEcCcccccchH---HHHHHHH
Confidence 4789999996 89999998888889994 4888888765544333 22332 123444 22333 2333322
Q ss_pred c-CCccEEEEcccc
Q 026924 105 Y-GSLNLLINASGI 117 (231)
Q Consensus 105 ~-g~id~lv~~ag~ 117 (231)
. +.+|++|.++|.
T Consensus 239 ~~~g~D~vid~~g~ 252 (356)
T 1pl8_A 239 LGCKPEVTIECTGA 252 (356)
T ss_dssp HTSCCSEEEECSCC
T ss_pred hCCCCCEEEECCCC
Confidence 2 479999999983
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0022 Score=53.67 Aligned_cols=75 Identities=16% Similarity=0.230 Sum_probs=50.2
Q ss_pred CeEEEEecCCCchhHHH-HHHH-HhcCCccEEEEeecCCC---CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEF-AKQL-LEKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 28 ~k~~LVtGas~gIG~ai-a~~l-~~~G~~~~vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++||+|+ |++|... +..+ ...|++ .|+.++++++ +.+.+. +.+. ..+ |.++.+ +.+ +.++
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~-~Vi~~~~~~~~~~~~~~~~----~lGa--~~v--~~~~~~-~~~-i~~~- 239 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYE-NLYCLGRRDRPDPTIDIIE----ELDA--TYV--DSRQTP-VED-VPDV- 239 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHCTTCCC-EEEEEECCCSSCHHHHHHH----HTTC--EEE--ETTTSC-GGG-HHHH-
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHcCCc-EEEEEeCCcccHHHHHHHH----HcCC--ccc--CCCccC-HHH-HHHh-
Confidence 389999999 9999999 7666 568986 5888888876 444333 2232 222 555433 223 3333
Q ss_pred HHcCCccEEEEcccc
Q 026924 103 EKYGSLNLLINASGI 117 (231)
Q Consensus 103 ~~~g~id~lv~~ag~ 117 (231)
.+.+|++|.++|.
T Consensus 240 --~gg~Dvvid~~g~ 252 (357)
T 2b5w_A 240 --YEQMDFIYEATGF 252 (357)
T ss_dssp --SCCEEEEEECSCC
T ss_pred --CCCCCEEEECCCC
Confidence 2479999999983
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0016 Score=54.84 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=52.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|+++||+|+ |++|+..+..+...|++ .|+.+++++++.+.+.+ .+.+. ..|..+ .+++.+.+.++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~i~~~t~-- 259 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKAIE----LGATE---CLNPKDYDKPIYEVICEKTN-- 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHH----TTCSE---EECGGGCSSCHHHHHHHHTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHHH----cCCcE---EEecccccchHHHHHHHHhC--
Confidence 4789999995 89999998888888995 48888887766554432 23321 134432 1233333333322
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 260 gg~Dvvid~~g~ 271 (373)
T 1p0f_A 260 GGVDYAVECAGR 271 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 479999999983
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0019 Score=54.45 Aligned_cols=74 Identities=15% Similarity=0.102 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|+ |++|+..+..+...|++ |+.+++++++.+.+.+. +... ..|..+.+.+ +++. +
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--Vi~~~~~~~~~~~a~~l----Ga~~---vi~~~~~~~~----~~~~---~ 256 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAH--VVAFTTSEAKREAAKAL----GADE---VVNSRNADEM----AAHL---K 256 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHH----TCSE---EEETTCHHHH----HTTT---T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHc----CCcE---EeccccHHHH----HHhh---c
Confidence 4789999998 78999999888889996 88888887666544432 3221 2455554322 2221 5
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|++|.++|.
T Consensus 257 g~Dvvid~~g~ 267 (369)
T 1uuf_A 257 SFDFILNTVAA 267 (369)
T ss_dssp CEEEEEECCSS
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0012 Score=55.48 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=49.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK- 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~- 104 (231)
+|+++||+||+|++|...+..+.. .|++ |+.+++++++.+.+.+ .+.+. ..|.++ ++ .+++.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~--Vi~~~~~~~~~~~~~~----lGad~---vi~~~~--~~---~~~v~~~~ 236 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLT--VIATASRPETQEWVKS----LGAHH---VIDHSK--PL---AAEVAALG 236 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSE--EEEECSSHHHHHHHHH----TTCSE---EECTTS--CH---HHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCE--EEEEeCCHHHHHHHHH----cCCCE---EEeCCC--CH---HHHHHHhc
Confidence 588999999999999887766555 4775 8888887665544332 33321 134433 22 3333332
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
.+.+|+++.++|
T Consensus 237 ~~g~Dvvid~~g 248 (363)
T 4dvj_A 237 LGAPAFVFSTTH 248 (363)
T ss_dssp SCCEEEEEECSC
T ss_pred CCCceEEEECCC
Confidence 247999999887
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0017 Score=54.17 Aligned_cols=69 Identities=20% Similarity=0.177 Sum_probs=49.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|+ |++|+..+..+...|++ |+.+++++++.+.+.+ .+.+..+ ++.+.+.+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~v~-----~~~~~~~~---------- 233 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAE--VSVFARNEHKKQDALS----MGVKHFY-----TDPKQCKE---------- 233 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCE--EEEECSSSTTHHHHHH----TTCSEEE-----SSGGGCCS----------
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHh----cCCCeec-----CCHHHHhc----------
Confidence 5889999997 89999999888889996 8888888877665433 2433222 33332211
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 234 ~~D~vid~~g~ 244 (348)
T 3two_A 234 ELDFIISTIPT 244 (348)
T ss_dssp CEEEEEECCCS
T ss_pred CCCEEEECCCc
Confidence 68999988874
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0029 Score=53.50 Aligned_cols=79 Identities=20% Similarity=0.224 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCC--ChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT--VESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls--~~~~v~~~~~~~~~~ 104 (231)
+|+++||+| +|++|+..+..+...|+. .|+.+++++++.+.+.+ .+.+. ..|.. +.+++ .+++.+.
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~---~~~v~~~ 262 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAE-NVIVIAGSPNRLKLAEE----IGADL---TLNRRETSVEER---RKAIMDI 262 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBS-EEEEEESCHHHHHHHHH----TTCSE---EEETTTSCHHHH---HHHHHHH
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCc-eEEEEcCCHHHHHHHHH----cCCcE---EEeccccCcchH---HHHHHHH
Confidence 478999999 899999999888889942 38888887765544332 23321 13443 13333 3333333
Q ss_pred c-C-CccEEEEcccc
Q 026924 105 Y-G-SLNLLINASGI 117 (231)
Q Consensus 105 ~-g-~id~lv~~ag~ 117 (231)
. + .+|++|.++|.
T Consensus 263 ~~g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 263 THGRGADFILEATGD 277 (380)
T ss_dssp TTTSCEEEEEECSSC
T ss_pred hCCCCCcEEEECCCC
Confidence 2 2 69999999984
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0011 Score=55.97 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=51.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH---
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--- 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~--- 103 (231)
+|+++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.+ .|.. ...|.++.+.. +.+.+
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~----~~i~~~~~ 248 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGAT-TVILSTRQATKRRLAEE----VGAT---ATVDPSAGDVV----EAIAGPVG 248 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHHH----HTCS---EEECTTSSCHH----HHHHSTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHH----cCCC---EEECCCCcCHH----HHHHhhhh
Confidence 4789999998 89999999888889995 48888887655443332 2322 12355544322 23332
Q ss_pred -HcCCccEEEEccc
Q 026924 104 -KYGSLNLLINASG 116 (231)
Q Consensus 104 -~~g~id~lv~~ag 116 (231)
..+++|++|.++|
T Consensus 249 ~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 249 LVPGGVDVVIECAG 262 (370)
T ss_dssp SSTTCEEEEEECSC
T ss_pred ccCCCCCEEEECCC
Confidence 1247999999987
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.002 Score=54.43 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=53.0
Q ss_pred cCeEEEEec-CCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtG-as~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|.++||.| |+|++|...+..+...|++ |+.+++++++.+.+.+ .+.+. ..|.++.+-.++ +.++...
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~---~~~~~~~~~~~~-v~~~t~~- 238 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIK--LVNIVRKQEQADLLKA----QGAVH---VCNAASPTFMQD-LTEALVS- 238 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCC--EEEEESSHHHHHHHHH----TTCSC---EEETTSTTHHHH-HHHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHh----CCCcE---EEeCCChHHHHH-HHHHhcC-
Confidence 578899997 8999999999888889997 8888887665554433 33321 134444432222 2222211
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
..+|++|.++|.
T Consensus 239 ~g~d~v~d~~g~ 250 (379)
T 3iup_A 239 TGATIAFDATGG 250 (379)
T ss_dssp HCCCEEEESCEE
T ss_pred CCceEEEECCCc
Confidence 269999999984
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0038 Score=55.71 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=34.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++++++|+|.|++ |+|.++++.|+..|.. ++.++|.+.
T Consensus 323 kL~~arVLIVGaG-GLGs~vA~~La~aGVG-~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCS-HHHHHHHHHHHHTTCC-EEEEECCCB
T ss_pred HHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCCC
Confidence 6788999999986 8999999999999998 899998864
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0016 Score=54.28 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=50.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+++||+|+ |++|+..+..+... |++ |+.+++++++.+.+.+. +.+. ..|..+. .++++++.+
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~--Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~---~~~~~~~~~- 235 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNIT--IVGISRSKKHRDFALEL----GADY---VSEMKDA---ESLINKLTD- 235 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCE--EEEECSCHHHHHHHHHH----TCSE---EECHHHH---HHHHHHHHT-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCE--EEEEeCCHHHHHHHHHh----CCCE---Eeccccc---hHHHHHhhc-
Confidence 6889999999 89999998888888 996 88888877655544332 3221 1233220 123334332
Q ss_pred cCCccEEEEcccc
Q 026924 105 YGSLNLLINASGI 117 (231)
Q Consensus 105 ~g~id~lv~~ag~ 117 (231)
..++|++|.++|.
T Consensus 236 g~g~D~vid~~g~ 248 (344)
T 2h6e_A 236 GLGASIAIDLVGT 248 (344)
T ss_dssp TCCEEEEEESSCC
T ss_pred CCCccEEEECCCC
Confidence 2279999999983
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0031 Score=53.79 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=52.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|.++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.+. |.+. ..|..+.+. .+++.+..
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~----~~~i~~~t~ 279 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGAS-KVILSEPSEVRRNLAKEL----GADH---VIDPTKENF----VEAVLDYTN 279 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHHHH----TCSE---EECTTTSCH----HHHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHc----CCCE---EEcCCCCCH----HHHHHHHhC
Confidence 5789999998 89999998888889995 488888877655544332 3221 235444432 23333322
Q ss_pred -CCccEEEEcccc
Q 026924 106 -GSLNLLINASGI 117 (231)
Q Consensus 106 -g~id~lv~~ag~ 117 (231)
.++|++|.++|.
T Consensus 280 g~g~D~vid~~g~ 292 (404)
T 3ip1_A 280 GLGAKLFLEATGV 292 (404)
T ss_dssp TCCCSEEEECSSC
T ss_pred CCCCCEEEECCCC
Confidence 269999999984
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0015 Score=54.75 Aligned_cols=37 Identities=14% Similarity=0.231 Sum_probs=29.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
+|.++||+|++|++|...+..+...|++ ++.+.++.+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~ 203 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLR--TINVVRDRP 203 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEECCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCE--EEEEecCcc
Confidence 5889999999999999998887788997 555555443
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0036 Score=52.64 Aligned_cols=78 Identities=17% Similarity=0.150 Sum_probs=50.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH-c
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-Y 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~-~ 105 (231)
+|+++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.+. +.+. ..|..+.+.. +++.+. .
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~-~Vi~~~~~~~~~~~a~~l----Ga~~---vi~~~~~~~~----~~~~~~~~ 256 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLELAKQL----GATH---VINSKTQDPV----AAIKEITD 256 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH----TCSE---EEETTTSCHH----HHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHHHc----CCCE---EecCCccCHH----HHHHHhcC
Confidence 4789999995 89999999888888995 488888876655444322 3221 1344443222 223222 1
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+++|++|.++|.
T Consensus 257 gg~D~vid~~g~ 268 (371)
T 1f8f_A 257 GGVNFALESTGS 268 (371)
T ss_dssp SCEEEEEECSCC
T ss_pred CCCcEEEECCCC
Confidence 379999999873
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0014 Score=53.28 Aligned_cols=46 Identities=20% Similarity=0.319 Sum_probs=38.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
++++|++||+|+ ||.|++++..|++.|++ .|.+++|+.++.+.+.+
T Consensus 119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~-~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 119 EIKNNICVVLGS-GGAARAVLQYLKDNFAK-DIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp CCTTSEEEEECS-STTHHHHHHHHHHTTCS-EEEEEESCHHHHHHHCT
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHH
Confidence 567999999998 58999999999999995 58889998776655443
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0044 Score=52.87 Aligned_cols=43 Identities=21% Similarity=0.050 Sum_probs=36.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
.+.+++++|+|+ |.+|+.+++.+...|++ |++++++....+.+
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~--V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAI--VRAFDTRPEVKEQV 211 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCGGGHHHH
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH
Confidence 467899999997 79999999999999996 88999987665543
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0013 Score=52.53 Aligned_cols=44 Identities=25% Similarity=0.168 Sum_probs=36.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
.+++ +++|.|+ ||.|++++..|++.|++ .|.+.+|+.++.+.+.
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~-~I~v~nR~~~ka~~la 149 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVK-DIWVVNRTIERAKALD 149 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESCHHHHHTCC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHH
Confidence 3567 8999997 79999999999999994 4999999876655543
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0051 Score=52.22 Aligned_cols=80 Identities=19% Similarity=0.191 Sum_probs=52.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||.|+ |++|+..+..+...|++ .|+.+++++++.+.+. +.|.+ ..|.++.+.+.+.+.++.. ..
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~-~Vi~~~~~~~~~~~a~----~lGa~----~i~~~~~~~~~~~v~~~t~-g~ 253 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAA-VVIVGDLNPARLAHAK----AQGFE----IADLSLDTPLHEQIAALLG-EP 253 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHH----HTTCE----EEETTSSSCHHHHHHHHHS-SS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCC-eEEEEcCCHHHHHHHH----HcCCc----EEccCCcchHHHHHHHHhC-CC
Confidence 5789999995 99999998888788996 5888888776554433 23432 2455544333322332211 12
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 254 g~Dvvid~~G~ 264 (398)
T 1kol_A 254 EVDCAVDAVGF 264 (398)
T ss_dssp CEEEEEECCCT
T ss_pred CCCEEEECCCC
Confidence 69999999985
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0061 Score=51.00 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=51.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|+ |++|...+..+...|++ |+.+++++++.+.+.+ +.+.+. ..|..+.+.+ .+..+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~--Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~-------~~~~~ 243 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHH--VTVISSSNKKREEALQ---DLGADD---YVIGSDQAKM-------SELAD 243 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHH-------HHSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHH---HcCCce---eeccccHHHH-------HHhcC
Confidence 6889999995 89999999888889996 8888888765544331 223321 1344443322 22225
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 244 g~D~vid~~g~ 254 (357)
T 2cf5_A 244 SLDYVIDTVPV 254 (357)
T ss_dssp TEEEEEECCCS
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0095 Score=49.52 Aligned_cols=108 Identities=13% Similarity=-0.029 Sum_probs=61.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccE-----EEEeecCCC--CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGC-----VIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~-----vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+++||||+|.+|.+++..|+..|.-.. +++.|.++. ..+.....+......+. .....++ . .
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~--~-------~ 73 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATD--K-------E 73 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEES--C-------H
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcC--C-------c
Confidence 4799999999999999999998775213 778887642 22322222222111111 1111111 1 1
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
.+.+..-|++|+.||... .+ .. +-.+.++.|......+.+.+..+
T Consensus 74 ~~~~~daDvVvitAg~pr--------kp--G~---tR~dll~~N~~i~~~i~~~i~~~ 118 (333)
T 5mdh_A 74 EIAFKDLDVAILVGSMPR--------RD--GM---ERKDLLKANVKIFKCQGAALDKY 118 (333)
T ss_dssp HHHTTTCSEEEECCSCCC--------CT--TC---CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCC--------CC--CC---CHHHHHHHHHHHHHHHHHHHHHh
Confidence 223347899999998542 11 11 12345777887776666666544
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0085 Score=49.41 Aligned_cols=82 Identities=15% Similarity=0.042 Sum_probs=53.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCcee-EEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD-VLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~-~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|++++|.|++.=+|+.+|+.|++.|+. |.+++|+........+... ...+ ...+..++++++.+.+.+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt--Vtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~~--- 245 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGAT--VYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSLD--- 245 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCE--EEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHHH---
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCE--EEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhcc---
Confidence 678999999999988899999999999996 8888887443333222221 1111 111122334555544443
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
-|+||.+.|..
T Consensus 246 ----ADIVIsAtg~p 256 (320)
T 1edz_A 246 ----SDVVITGVPSE 256 (320)
T ss_dssp ----CSEEEECCCCT
T ss_pred ----CCEEEECCCCC
Confidence 59999998853
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.032 Score=45.88 Aligned_cols=117 Identities=13% Similarity=0.070 Sum_probs=66.4
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC--ceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++.|+|++|.+|..++..|++.|.-..|.+.|+++ .+.....+..... ++..+. ..++.+ +.+..
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~-------~a~~~ 68 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLP-------DCLKG 68 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHH-------HHHTT
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHH-------HHhCC
Confidence 58999999999999999999988311599999987 2222222221111 122211 011222 12346
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
-|++|+.+|... .+ ..+. .+.+..|+.....+.+.+.++-.+ +.++++|-..
T Consensus 69 aDvVvi~ag~~~--------~~--g~~r---~dl~~~n~~i~~~i~~~i~~~~p~---------a~viv~sNPv 120 (314)
T 1mld_A 69 CDVVVIPAGVPR--------KP--GMTR---DDLFNTNATIVATLTAACAQHCPD---------AMICIISNPV 120 (314)
T ss_dssp CSEEEECCSCCC--------CT--TCCG---GGGHHHHHHHHHHHHHHHHHHCTT---------SEEEECSSCH
T ss_pred CCEEEECCCcCC--------CC--CCcH---HHHHHHHHHHHHHHHHHHHhhCCC---------eEEEEECCCc
Confidence 799999998642 11 1111 124567777666666666544322 3777766443
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0028 Score=52.95 Aligned_cols=43 Identities=16% Similarity=0.027 Sum_probs=34.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+++++.|+|++|.+|..++..++..|....|++.|.++++++.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g 49 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEG 49 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHH
Confidence 4678999999999999999999999852149999987765554
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.024 Score=46.95 Aligned_cols=77 Identities=16% Similarity=0.096 Sum_probs=49.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc----CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+.+++.|+|+ |.+|.+++..|+..|.-..|++.|++++.++.....+.. .+..+.....| .
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----------- 68 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----------- 68 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence 3467999996 999999999999988621499999987665542221211 11233333222 1
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
+.+..-|++|..+|..
T Consensus 69 ~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 69 EDCKDADIVCICAGAN 84 (326)
T ss_dssp GGGTTCSEEEECCSCC
T ss_pred HHhCCCCEEEEecccC
Confidence 2234679999999863
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0077 Score=51.03 Aligned_cols=43 Identities=19% Similarity=0.053 Sum_probs=37.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
.+.+++++|+|+ |++|+.++..+...|++ |++.+++....+.+
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~--V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAV--VMATDVRAATKEQV 211 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCSTTHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence 568999999996 79999999999999996 88999988765544
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0035 Score=51.64 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=48.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+||+|++|+..+..+...|++ |+.+++++ +.+ ..++.+... ..|..+.+.+. +...
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~--vi~~~~~~-~~~----~~~~lGa~~---~i~~~~~~~~~-------~~~~ 214 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTT--VITTASKR-NHA----FLKALGAEQ---CINYHEEDFLL-------AIST 214 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEECHH-HHH----HHHHHTCSE---EEETTTSCHHH-------HCCS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCE--EEEEeccc-hHH----HHHHcCCCE---EEeCCCcchhh-------hhcc
Confidence 5889999999999999999999999997 76666432 222 222223321 23554443221 2225
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|+++.++|.
T Consensus 215 g~D~v~d~~g~ 225 (321)
T 3tqh_A 215 PVDAVIDLVGG 225 (321)
T ss_dssp CEEEEEESSCH
T ss_pred CCCEEEECCCc
Confidence 79999999883
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.023 Score=47.93 Aligned_cols=84 Identities=15% Similarity=0.181 Sum_probs=55.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecC-----------CChHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL-----------TVEST 93 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-----------s~~~~ 93 (231)
.+++++++|+|+ |.+|..+++.+...|++ |++.+++....+.+.+. +.+ ++..|+ -.++.
T Consensus 181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~--V~v~D~~~~~l~~~~~l----Ga~--~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 181 TVKPASALVLGV-GVAGLQALATAKRLGAK--TTGYDVRPEVAEQVRSV----GAQ--WLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp EECCCEEEEESC-SHHHHHHHHHHHHHTCE--EEEECSSGGGHHHHHHT----TCE--ECCCC-------------CHHH
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHc----CCe--EEeccccccccccchhhhhHHH
Confidence 357789999999 69999999999999996 88999988766554432 222 222111 01112
Q ss_pred HHHHHHHHHHHcCCccEEEEcccc
Q 026924 94 IEASAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag~ 117 (231)
...-.+.+.+....-|++|+++..
T Consensus 252 ~~~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 252 RAQQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HhhhHHHHHHHHhcCCEEEECCCC
Confidence 233344555556789999988754
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0043 Score=51.76 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=50.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|.++||+|+ |++|...+..+...|++ .|+.+++++++.+.+.++ +.+. ..|.++.+. .+++.+..
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~----~~~v~~~t~ 232 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAG-RIFAVGSRKHCCDIALEY----GATD---IINYKNGDI----VEQILKATD 232 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCS-SEEEECCCHHHHHHHHHH----TCCE---EECGGGSCH----HHHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEECCCHHHHHHHHHh----CCce---EEcCCCcCH----HHHHHHHcC
Confidence 4789999985 89999999888889994 388888876554443332 3221 134433322 23333322
Q ss_pred C-CccEEEEcccc
Q 026924 106 G-SLNLLINASGI 117 (231)
Q Consensus 106 g-~id~lv~~ag~ 117 (231)
+ ++|++|.++|.
T Consensus 233 g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 233 GKGVDKVVIAGGD 245 (352)
T ss_dssp TCCEEEEEECSSC
T ss_pred CCCCCEEEECCCC
Confidence 2 59999999884
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.025 Score=45.71 Aligned_cols=39 Identities=21% Similarity=0.028 Sum_probs=32.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+++.|.|+ |.+|..+|..|++.|++ |++.+++++..+..
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~--V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFA--VTAYDINTDALDAA 43 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEeCCHHHHHHH
Confidence 46777776 78999999999999997 88899987765553
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.019 Score=47.53 Aligned_cols=78 Identities=9% Similarity=0.043 Sum_probs=50.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc---CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+++++.|+|+ |.+|.+++..|+..|.-..+++.|.+++.++.....+.. ....+....-| .
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------------~ 71 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------------Y 71 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------------G
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------------H
Confidence 35678999996 899999999999988722599999987665543222221 11223322211 1
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
+.+..-|++|..+|..
T Consensus 72 ~a~~~aDiVvi~ag~~ 87 (326)
T 3vku_A 72 SDAKDADLVVITAGAP 87 (326)
T ss_dssp GGGTTCSEEEECCCCC
T ss_pred HHhcCCCEEEECCCCC
Confidence 2345789999999864
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.01 Score=50.43 Aligned_cols=80 Identities=20% Similarity=0.207 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|+ |++|...+..+...|++ .|+.+++++++.+.+. +.+. . ..|..+.+.+.+.+.++.. ..
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~----~lGa--~--~i~~~~~~~~~~~~~~~~~-g~ 253 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAA-CVIVGDQNPERLKLLS----DAGF--E--TIDLRNSAPLRDQIDQILG-KP 253 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHH----TTTC--E--EEETTSSSCHHHHHHHHHS-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHH----HcCC--c--EEcCCCcchHHHHHHHHhC-CC
Confidence 5789999996 99999998888778994 4888888776554332 2343 2 2465543321222222211 12
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 254 g~Dvvid~~g~ 264 (398)
T 2dph_A 254 EVDCGVDAVGF 264 (398)
T ss_dssp CEEEEEECSCT
T ss_pred CCCEEEECCCC
Confidence 69999999984
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0037 Score=48.10 Aligned_cols=39 Identities=15% Similarity=0.234 Sum_probs=33.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+++|+||+|.+|.++++.|++.|++ |.+.+|+++..+.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~--V~~~~r~~~~~~~~ 40 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHE--IVVGSRREEKAEAK 40 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence 5889999999999999999999986 88889986655443
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.031 Score=45.39 Aligned_cols=85 Identities=12% Similarity=0.060 Sum_probs=59.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-------hcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+++.|.| .|.+|..++..|++.|++ |.+.+|+++..+.+.+.- ...-. ...+-.=+.+...++++++++
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l 91 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGG--VTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGEL 91 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTC--EEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHH
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHH
Confidence 4677777 578999999999999997 888899988776543221 11111 344555566677888888887
Q ss_pred HHHcCCccEEEEcccc
Q 026924 102 KEKYGSLNLLINASGI 117 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~ 117 (231)
.+...+-.++|+....
T Consensus 92 ~~~l~~g~ivv~~st~ 107 (296)
T 3qha_A 92 AGHAKPGTVIAIHSTI 107 (296)
T ss_dssp HTTCCTTCEEEECSCC
T ss_pred HHhcCCCCEEEEeCCC
Confidence 7655555677776653
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0085 Score=49.10 Aligned_cols=68 Identities=12% Similarity=-0.043 Sum_probs=44.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+|+ |++|...+..+...|++ |+.++ ++++.+.+.++ +.+.. + | |.+. + .+
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~--Vi~~~-~~~~~~~~~~l----Ga~~v-~--~--d~~~-------v---~~ 198 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNAGYV--VDLVS-ASLSQALAAKR----GVRHL-Y--R--EPSQ-------V---TQ 198 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEC-SSCCHHHHHHH----TEEEE-E--S--SGGG-------C---CS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEE-ChhhHHHHHHc----CCCEE-E--c--CHHH-------h---CC
Confidence 5889999999 99999999888889996 88887 66665544332 32211 1 2 2111 1 35
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|+++.++|.
T Consensus 199 g~Dvv~d~~g~ 209 (315)
T 3goh_A 199 KYFAIFDAVNS 209 (315)
T ss_dssp CEEEEECC---
T ss_pred CccEEEECCCc
Confidence 78999988874
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.017 Score=47.79 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=50.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|+ |++|...+..+...|++ .++.+++++++.+.+++ .|... ..|.++.+ ..+..+++. ...
T Consensus 160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~-~vi~~~~~~~k~~~a~~----lGa~~---~i~~~~~~-~~~~~~~~~-~~~ 228 (346)
T 4a2c_A 160 ENKNVIIIGA-GTIGLLAIQCAVALGAK-SVTAIDISSEKLALAKS----FGAMQ---TFNSSEMS-APQMQSVLR-ELR 228 (346)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH----TTCSE---EEETTTSC-HHHHHHHHG-GGC
T ss_pred CCCEEEEECC-CCcchHHHHHHHHcCCc-EEEEEechHHHHHHHHH----cCCeE---EEeCCCCC-HHHHHHhhc-ccC
Confidence 5789999987 89999999888889998 56777877665443332 33322 13444332 223333332 235
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
..|+++.++|
T Consensus 229 g~d~v~d~~G 238 (346)
T 4a2c_A 229 FNQLILETAG 238 (346)
T ss_dssp SSEEEEECSC
T ss_pred Cccccccccc
Confidence 6788888887
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.012 Score=48.45 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=55.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh-------hhcCCCceeEEEecCCChHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+.+++.|.|. |.+|..++..|++.|++ |.+.+|+++..+.+.+. ....-.+...+-.=+.+...++.++.
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 106 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYA--LQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLF 106 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHT
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCe--EEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHc
Confidence 4567888866 78999999999999997 88889987665543221 00001123334444556667777775
Q ss_pred --HHHHHcCCccEEEEccc
Q 026924 100 --SIKEKYGSLNLLINASG 116 (231)
Q Consensus 100 --~~~~~~g~id~lv~~ag 116 (231)
++.+...+-.++|+...
T Consensus 107 ~~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 107 AQGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp TTCHHHHCCTTCEEEECSC
T ss_pred chhHHhhCCCCCEEEecCC
Confidence 55555555566776654
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.016 Score=48.15 Aligned_cols=76 Identities=17% Similarity=0.135 Sum_probs=48.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.|.++||+|+ |++|...+..+... |+ .|+.+++++++.+.+.+ .+.+.. .|-.+ +. .+++.+..
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~--~Vi~~~~~~~~~~~~~~----lGa~~~---i~~~~--~~---~~~v~~~t 235 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAA--RVIAVDLDDDRLALARE----VGADAA---VKSGA--GA---ADAIRELT 235 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCC--EEEEEESCHHHHHHHHH----TTCSEE---EECST--TH---HHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC--EEEEEcCCHHHHHHHHH----cCCCEE---EcCCC--cH---HHHHHHHh
Confidence 5789999998 89999988777666 55 48988888766554433 233221 23322 22 23333322
Q ss_pred --CCccEEEEcccc
Q 026924 106 --GSLNLLINASGI 117 (231)
Q Consensus 106 --g~id~lv~~ag~ 117 (231)
..+|+++.++|.
T Consensus 236 ~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 236 GGQGATAVFDFVGA 249 (345)
T ss_dssp GGGCEEEEEESSCC
T ss_pred CCCCCeEEEECCCC
Confidence 279999999983
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.11 Score=37.33 Aligned_cols=85 Identities=22% Similarity=0.185 Sum_probs=53.9
Q ss_pred cCeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 27 ~~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+.+.+.|.|+| +.+|..+++.|.+.|++ |+..+.+.+.... ...........+.....=+. .+.+.++++++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~--V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~~~ 89 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAKEA 89 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCE--EEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHHHH
Confidence 45679999997 78999999999999996 7777665433221 12222233334444444444 57788888877
Q ss_pred HHHcCCccEEEEccc
Q 026924 102 KEKYGSLNLLINASG 116 (231)
Q Consensus 102 ~~~~g~id~lv~~ag 116 (231)
.+. .+..++...+
T Consensus 90 ~~~--g~~~i~~~~~ 102 (138)
T 1y81_A 90 VEA--GFKKLWFQPG 102 (138)
T ss_dssp HHT--TCCEEEECTT
T ss_pred HHc--CCCEEEEcCc
Confidence 652 3455665554
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.015 Score=48.64 Aligned_cols=82 Identities=16% Similarity=0.142 Sum_probs=52.0
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
..++++++|+|.|+ ||+|.++++.|+..|.. ++.++|++.-....+.. ++.+-.-|+. ...++.+.+.+.
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg-~i~lvD~D~Ve~sNL~R-------q~l~~~~diG-~~Ka~~~~~~l~ 182 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIG-EIILIDNDQIENTNLTR-------QVLFSEDDVG-KNKTEVIKRELL 182 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEECCBCCGGGGGT-------CTTCCGGGTT-SBHHHHHHHHHH
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCC-eEEEECCCcCccccccc-------ccCCChHHCC-ChHHHHHHHHHH
Confidence 44678899999998 68999999999999998 89999987544333221 1112223442 223445555555
Q ss_pred HHcCCccEEEEc
Q 026924 103 EKYGSLNLLINA 114 (231)
Q Consensus 103 ~~~g~id~lv~~ 114 (231)
+..+.+++-.+.
T Consensus 183 ~~np~v~v~~~~ 194 (353)
T 3h5n_A 183 KRNSEISVSEIA 194 (353)
T ss_dssp HHCTTSEEEEEE
T ss_pred HHCCCCeEEEee
Confidence 554555544443
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0068 Score=50.00 Aligned_cols=40 Identities=30% Similarity=0.314 Sum_probs=34.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
++||+|++|++|+..+..+...|++ |+.+++++++.+.+.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~--vi~~~~~~~~~~~~~ 192 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYD--VVASTGNREAADYLK 192 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCC--EEEEESSSSTHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH
Confidence 7999999999999999988889997 888888876655443
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.053 Score=45.60 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=46.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+-+++|+++|.|++ .+|+.+++.+.+.|++ |++++.+..... ... .. ..+..|..|.+.+.+++++
T Consensus 8 ~~~~~~~IlIlG~G-~lg~~la~aa~~lG~~--viv~d~~~~~p~--~~~----ad--~~~~~~~~d~~~l~~~~~~ 73 (377)
T 3orq_A 8 KLKFGATIGIIGGG-QLGKMMAQSAQKMGYK--VVVLDPSEDCPC--RYV----AH--EFIQAKYDDEKALNQLGQK 73 (377)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESCTTCTT--GGG----SS--EEEECCTTCHHHHHHHHHH
T ss_pred cCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEECCCCChh--hhh----CC--EEEECCCCCHHHHHHHHHh
Confidence 34578999999865 7999999999999997 777776543211 111 11 2456788888887777653
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.029 Score=47.77 Aligned_cols=45 Identities=20% Similarity=0.104 Sum_probs=37.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
.+.+.+++|+|+ |.+|..+++.+...|++ |++.|++....+.+.+
T Consensus 187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~--V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 187 TVPAAKIFVMGA-GVAGLQAIATARRLGAV--VSATDVRPAAKEQVAS 231 (405)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSTTHHHHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHH
Confidence 356789999999 69999999999999996 8899999876555443
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.027 Score=44.85 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=55.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh--------hcCCCceeEEEecCCChHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK--------NRFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~--------~~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
+++++.|.|+ |.+|..++..|++.|++ .|.+.+|+++..+.+.+.. ...-.+...+-.=+. ...+.+++
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~v~ 85 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRKGFR-IVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAELL 85 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHHHH
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCe-EEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHHHH
Confidence 3456889987 89999999999999986 4778888876555433221 011112222222232 33567777
Q ss_pred HHHHHHcCCccEEEEccccC
Q 026924 99 KSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~ 118 (231)
+++.+...+=.++|++.+..
T Consensus 86 ~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 86 QGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp HHHHTTCCTTCEEEECCTTS
T ss_pred HHHHhhcCCCcEEEECCCCC
Confidence 77765443445777777543
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.067 Score=41.10 Aligned_cols=76 Identities=9% Similarity=0.135 Sum_probs=49.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+..+++.|.| .|.+|.+++..|++.|.+ |.+.+|+++. . ...++.++.+ . ...+.++++++...
T Consensus 16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~--V~~~~~~~~~-------~--~~aD~vi~av--~-~~~~~~v~~~l~~~ 80 (209)
T 2raf_A 16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHE--VTYYGSKDQA-------T--TLGEIVIMAV--P-YPALAALAKQYATQ 80 (209)
T ss_dssp ----CEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECTTCCC-------S--SCCSEEEECS--C-HHHHHHHHHHTHHH
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHHCCCE--EEEEcCCHHH-------h--ccCCEEEEcC--C-cHHHHHHHHHHHHh
Confidence 45667899999 689999999999999996 8888887651 0 1224444333 3 56677788877655
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
.. =.++|+...
T Consensus 81 ~~-~~~vi~~~~ 91 (209)
T 2raf_A 81 LK-GKIVVDITN 91 (209)
T ss_dssp HT-TSEEEECCC
T ss_pred cC-CCEEEEECC
Confidence 44 245555443
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.023 Score=47.33 Aligned_cols=40 Identities=23% Similarity=0.003 Sum_probs=34.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
..+.||++.|.|. |.||+++|+.+...|++ |+..+|+...
T Consensus 167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~--V~~~dr~~~~ 206 (340)
T 4dgs_A 167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMS--VRYWNRSTLS 206 (340)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCE--EEEECSSCCT
T ss_pred ccccCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCccc
Confidence 4678999999998 68999999999999997 8888887654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=95.61 E-value=0.034 Score=44.85 Aligned_cols=150 Identities=12% Similarity=0.061 Sum_probs=84.5
Q ss_pred CeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCc--cc-----------------hhhhhhcCCCceeEEEec
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGA--TG-----------------LLDLKNRFPERLDVLQLD 87 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~--~~-----------------~~~~~~~~~~~v~~~~~D 87 (231)
...++|+|++|.+|+.+++.+.+ .|.+ .+.+++++.... .+ +.+.+. .+. +.+|
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~e-lva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~----~~D-vVID 78 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQ-LGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD----DFD-VFID 78 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEE-CCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT----SCS-EEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc----CCC-EEEE
Confidence 35799999999999999999875 5665 233556654321 11 111111 222 3458
Q ss_pred CCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhh-------hhhhhhhH----HHHHHHHh
Q 026924 88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-------AYEVNAVG----PILVIKHM 156 (231)
Q Consensus 88 ls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~n~~~----~~~~~~~~ 156 (231)
++.++.....+....+. .+++++-..|.. .. ..+.+.+ .+..|+.- .+.+++.+
T Consensus 79 ft~p~~~~~~~~~a~~~--G~~vVigTtG~~--------~e-----~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~a 143 (273)
T 1dih_A 79 FTRPEGTLNHLAFCRQH--GKGMVIGTTGFD--------EA-----GKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKA 143 (273)
T ss_dssp CSCHHHHHHHHHHHHHT--TCEEEECCCCCC--------HH-----HHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhC--CCCEEEECCCCC--------HH-----HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHH
Confidence 99999888888777654 577887666532 11 1122221 24444322 34455566
Q ss_pred hhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhh
Q 026924 157 SPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 157 ~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
.++|.. .+ .|= +. ..++. .+--.+++.++...+.+.+.+...
T Consensus 144 a~~~~~-~~-------die-ii--E~Hh~---~K~DaPSGTA~~~ae~i~~~~~~~ 185 (273)
T 1dih_A 144 AKVMGD-YT-------DIE-II--EAHHR---HKVDAPSGTALAMGEAIAHALDKD 185 (273)
T ss_dssp HHHHTT-TS-------EEE-EE--EEECT---TCCSSSCHHHHHHHHHHHHHTTCC
T ss_pred HHhcCC-CC-------CEE-EE--EeecC---CCCCCCCHHHHHHHHHHHHhhCCC
Confidence 666642 11 111 11 12222 343457899999888887766543
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.0072 Score=50.85 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=35.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+++||+++|+|. |.+|..+|+.|.+.|++ |++.|++.+.++.
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~Gak--Vvv~D~~~~~l~~ 211 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAK--LVVTDVNKAAVSA 211 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCE--EEEEcCCHHHHHH
Confidence 578999999997 78999999999999997 7788887654443
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.022 Score=45.95 Aligned_cols=40 Identities=18% Similarity=0.323 Sum_probs=33.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+++.|.|++|.+|.++++.|++.|++ |++.+|+++..+.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~--V~~~~r~~~~~~~~ 51 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHH--LAAIEIAPEGRDRL 51 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSE--EEEECCSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCHHHHHHH
Confidence 47999999999999999999999986 88888886554443
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.05 Score=43.88 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=56.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCC---ccEEEEeecCCCCccchhhhh---------h-cCCCceeEEEecCCChHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKND---KGCVIATCRNPNGATGLLDLK---------N-RFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~---~~~vi~~~r~~~~~~~~~~~~---------~-~~~~~v~~~~~Dls~~~~v 94 (231)
.+++.|.|+ |.+|.+++..|++.|+ + |.+.+|+++..+.+.+.. . -...++.++.+ .++.+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~--V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~ 76 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNR--ICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQI 76 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGG--EEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCe--EEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHH
Confidence 356888887 7899999999999998 6 888999887666543321 0 01223434333 35678
Q ss_pred HHHHHHHHHH-cCCccEEEEcccc
Q 026924 95 EASAKSIKEK-YGSLNLLINASGI 117 (231)
Q Consensus 95 ~~~~~~~~~~-~g~id~lv~~ag~ 117 (231)
.++++++... +.+=.++|++++.
T Consensus 77 ~~vl~~l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 77 KMVCEELKDILSETKILVISLAVG 100 (280)
T ss_dssp HHHHHHHHHHHHTTTCEEEECCTT
T ss_pred HHHHHHHHhhccCCCeEEEEecCC
Confidence 8888888765 5433478877653
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.022 Score=49.28 Aligned_cols=39 Identities=21% Similarity=0.162 Sum_probs=34.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
+++++|.++|.|. |+.|.++|+.|.++|++ |.+.|++..
T Consensus 5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~--V~~~D~~~~ 43 (451)
T 3lk7_A 5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAI--VTVNDGKPF 43 (451)
T ss_dssp CTTTTCEEEEECC-TTTHHHHHHHHHHTTCE--EEEEESSCG
T ss_pred hhcCCCEEEEEee-CHHHHHHHHHHHhCCCE--EEEEeCCcc
Confidence 4578999999999 78999999999999997 888888664
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.09 Score=43.43 Aligned_cols=42 Identities=17% Similarity=-0.027 Sum_probs=34.5
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
++.+++.|+|+ |.+|.+++..|+..|.. .|.+.|++++..+.
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~g 46 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELG-DVVLFDIAEGTPQG 46 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHH
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCchhHHH
Confidence 34567999998 89999999999999982 49999998877653
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.026 Score=45.56 Aligned_cols=85 Identities=21% Similarity=0.120 Sum_probs=55.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-------hcCCCceeEEEecCCChHHHHHHH---
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASA--- 98 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~Dls~~~~v~~~~--- 98 (231)
+++.|.|. |.+|..++..|++.|++ |.+.+|+++..+.+.+.- ...-.+...+-.=+.+...++.++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 78 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCS--VTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGK 78 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCc
Confidence 46788875 79999999999999996 888999887766543210 000011233444455666777777
Q ss_pred HHHHHHcCCccEEEEccc
Q 026924 99 KSIKEKYGSLNLLINASG 116 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag 116 (231)
+++.+...+=.++|+..+
T Consensus 79 ~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 79 HGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp TCHHHHCCTTCEEEECSC
T ss_pred chHhhcCCCCCEEEeCCC
Confidence 666655545566776654
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.034 Score=45.27 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=33.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
.+++||.++|.|.++-.|+.++..|++.|+. |.+++|.
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt--Vtv~~~~ 198 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENAT--VTIVHSG 198 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCC
Confidence 4678999999999988999999999999996 7777764
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.019 Score=47.09 Aligned_cols=85 Identities=14% Similarity=0.009 Sum_probs=52.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-C------CCceeEEEecCCChHHHHHHH---
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F------PERLDVLQLDLTVESTIEASA--- 98 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~------~~~v~~~~~Dls~~~~v~~~~--- 98 (231)
+++.|.| .|.+|..++..|++.|++ |.+.+|+++..+.+.+.-.. . -.+...+-.=+.+...++.++
T Consensus 22 ~~I~iIG-~G~mG~~~A~~l~~~G~~--V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 98 (310)
T 3doj_A 22 MEVGFLG-LGIMGKAMSMNLLKNGFK--VTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK 98 (310)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence 5688887 478999999999999996 88899988776654321000 0 011233333445556666666
Q ss_pred HHHHHHcCCccEEEEccc
Q 026924 99 KSIKEKYGSLNLLINASG 116 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag 116 (231)
+++.+...+=.++|+...
T Consensus 99 ~~l~~~l~~g~~vv~~st 116 (310)
T 3doj_A 99 GGVLEQICEGKGYIDMST 116 (310)
T ss_dssp TCGGGGCCTTCEEEECSC
T ss_pred hhhhhccCCCCEEEECCC
Confidence 444444444456666554
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.03 Score=49.94 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.++++++|+|.|++ |+|.++++.|+..|.. ++.++|.+.
T Consensus 323 ~kL~~~kVLIVGaG-GLGs~va~~La~aGVG-~ItLvD~D~ 361 (598)
T 3vh1_A 323 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNGT 361 (598)
T ss_dssp HHHHTCEEEEECCS-HHHHHHHHHHHTTTCC-EEEEECCSB
T ss_pred HHHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCCc
Confidence 46788999999976 8999999999999998 899988753
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.013 Score=48.14 Aligned_cols=42 Identities=26% Similarity=0.245 Sum_probs=35.0
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
|+ +||+|++|++|...+..+...|++ |+.+++++++.+.+.+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~--Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQ--VAAVSGRESTHGYLKS 189 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHHHH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh
Confidence 46 999999999999999988889997 8888888766555443
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0079 Score=47.06 Aligned_cols=56 Identities=14% Similarity=0.040 Sum_probs=37.2
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v 94 (231)
.+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+. ..+.++..|.++++.+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~---v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l 64 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV---FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDL 64 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE---EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe---EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHH
Confidence 356888997 7999999999999876 556677655433221 2355566676665543
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.083 Score=41.84 Aligned_cols=77 Identities=10% Similarity=0.176 Sum_probs=53.6
Q ss_pred EEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++.|.|++|.+|+.+++.+.+. |.+ .+.+.+++ ...+. .... ... +.+|++.++.+.+.+....+. ++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~e-lva~~d~~-~dl~~---~~~~---~~D-vvIDfT~p~a~~~~~~~a~~~--g~ 70 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLT-LSAELDAG-DPLSL---LTDG---NTE-VVIDFTHPDVVMGNLEFLIDN--GI 70 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCE-EEEEECTT-CCTHH---HHHT---TCC-EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEccC-CCHHH---Hhcc---CCc-EEEEccChHHHHHHHHHHHHc--CC
Confidence 5899999999999999999865 786 33445553 22222 2221 122 568999999998888776554 68
Q ss_pred cEEEEcccc
Q 026924 109 NLLINASGI 117 (231)
Q Consensus 109 d~lv~~ag~ 117 (231)
++|+...|.
T Consensus 71 ~~VigTTG~ 79 (245)
T 1p9l_A 71 HAVVGTTGF 79 (245)
T ss_dssp EEEECCCCC
T ss_pred CEEEcCCCC
Confidence 888877774
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.13 Score=42.45 Aligned_cols=40 Identities=13% Similarity=-0.016 Sum_probs=34.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCC-ccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~-~~~vi~~~r~~~~~~~ 69 (231)
+.+++.|+|+ |.+|.+++..|+..|. + |.+.|++++.++.
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~--V~L~D~~~~~~~~ 48 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELAD--VVLYDVVKGMPEG 48 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCE--EEEECSSSSHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCe--EEEEECChhHHHH
Confidence 3457999998 8999999999999998 6 9999999877665
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.033 Score=45.30 Aligned_cols=80 Identities=11% Similarity=0.030 Sum_probs=49.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.+++.|.||.|.+|.+++..|.+.|++ |.+.+|+++. ...+... ..++.++.+- ...+.++++++.....+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~--V~~~~~~~~~--~~~~~~~--~aDvVilavp---~~~~~~vl~~l~~~l~~ 91 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYP--ISILDREDWA--VAESILA--NADVVIVSVP---INLTLETIERLKPYLTE 91 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCC--EEEECTTCGG--GHHHHHT--TCSEEEECSC---GGGHHHHHHHHGGGCCT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCe--EEEEECCccc--CHHHHhc--CCCEEEEeCC---HHHHHHHHHHHHhhcCC
Confidence 356999999999999999999999997 8888887643 1112111 2344444332 23366666666543332
Q ss_pred ccEEEEccc
Q 026924 108 LNLLINASG 116 (231)
Q Consensus 108 id~lv~~ag 116 (231)
=.+|+..++
T Consensus 92 ~~iv~~~~s 100 (298)
T 2pv7_A 92 NMLLADLTS 100 (298)
T ss_dssp TSEEEECCS
T ss_pred CcEEEECCC
Confidence 234444443
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.11 Score=42.67 Aligned_cols=103 Identities=10% Similarity=-0.006 Sum_probs=57.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC---CCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.++.|+|+ |.+|..++..|+..|.-..|++.|.++++++.....+... ...+.... .+ .+.+
T Consensus 8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~-----------~~a~ 72 (318)
T 1y6j_A 8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD-----------YSDV 72 (318)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC-----------HHHh
Confidence 46888998 9999999999999886224999999887766533222211 11221111 11 1234
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
..-|++|..+|... .+ ..+. .+.+..|+.-...+.+.+.++
T Consensus 73 ~~aDvVii~~g~p~--------k~--g~~r---~dl~~~n~~i~~~i~~~i~~~ 113 (318)
T 1y6j_A 73 KDCDVIVVTAGANR--------KP--GETR---LDLAKKNVMIAKEVTQNIMKY 113 (318)
T ss_dssp TTCSEEEECCCC----------------CH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCC--------CC--CcCH---HHHHHhhHHHHHHHHHHHHHh
Confidence 57899999998532 11 1111 123566666555555555544
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.025 Score=46.83 Aligned_cols=40 Identities=23% Similarity=0.159 Sum_probs=29.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
.|.++||+|+ |++|...+..+...|.. .|+.+++++++.+
T Consensus 163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~-~Vi~~~~~~~r~~ 202 (348)
T 4eez_A 163 PGDWQVIFGA-GGLGNLAIQYAKNVFGA-KVIAVDINQDKLN 202 (348)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTSCC-EEEEEESCHHHHH
T ss_pred CCCEEEEEcC-CCccHHHHHHHHHhCCC-EEEEEECcHHHhh
Confidence 4789999987 67888777777665433 5999988876544
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.0079 Score=48.51 Aligned_cols=43 Identities=28% Similarity=0.238 Sum_probs=35.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
++++++++|.|+ |++|++++..|.+.|++ |.+++|+.++.+.+
T Consensus 126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~--V~v~~r~~~~~~~l 168 (275)
T 2hk9_A 126 EVKEKSILVLGA-GGASRAVIYALVKEGAK--VFLWNRTKEKAIKL 168 (275)
T ss_dssp TGGGSEEEEECC-SHHHHHHHHHHHHHTCE--EEEECSSHHHHHHH
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHcCCE--EEEEECCHHHHHHH
Confidence 467899999996 69999999999999985 88889987554443
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.062 Score=38.65 Aligned_cols=86 Identities=17% Similarity=0.123 Sum_probs=51.8
Q ss_pred cCeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecC--CCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRN--PNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 27 ~~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~--~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+-+.+.|.|+| +.+|..+++.|.+.|++ |+-++.+ ...... ...........+.....=+ ..+.+.++++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~v-p~~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFR-PPSALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECS-CHHHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEe-CHHHHHHHHH
Confidence 35679999998 78999999999999996 6665554 222211 1222223333333333323 3467777777
Q ss_pred HHHHHcCCccEEEEcccc
Q 026924 100 SIKEKYGSLNLLINASGI 117 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~ 117 (231)
++.+. .+..+++.+|+
T Consensus 89 ~~~~~--gi~~i~~~~g~ 104 (140)
T 1iuk_A 89 EVLAL--RPGLVWLQSGI 104 (140)
T ss_dssp HHHHH--CCSCEEECTTC
T ss_pred HHHHc--CCCEEEEcCCc
Confidence 77664 24456666663
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.17 Score=41.62 Aligned_cols=41 Identities=22% Similarity=0.067 Sum_probs=33.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+.+++.|+|+ |.+|.+++..|+..|.. .|++.|.+++..+.
T Consensus 4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g 44 (321)
T 3p7m_A 4 ARKKITLVGA-GNIGGTLAHLALIKQLG-DVVLFDIAQGMPNG 44 (321)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCChHHHHH
Confidence 3457888895 89999999999998873 49999999877654
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.027 Score=45.56 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=34.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+++||.++|.|.++-.|+.++..|++.|+. |.+++++.
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt--Vtv~h~~t 194 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGAT--VSVCHIKT 194 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCc
Confidence 4678999999999999999999999999996 77776643
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.045 Score=45.45 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=44.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+|++|++|...+..+...|.. .|+..+ +.++.+.+. .+... ..| .+.+ +.+.+.++. -+
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~-~V~~~~-~~~~~~~~~-----~ga~~---~~~-~~~~-~~~~~~~~~--~~ 207 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNV-TVFGTA-STFKHEAIK-----DSVTH---LFD-RNAD-YVQEVKRIS--AE 207 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTSTTC-EEEEEE-CGGGHHHHG-----GGSSE---EEE-TTSC-HHHHHHHHC--TT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCc-EEEEeC-CHHHHHHHH-----cCCcE---EEc-CCcc-HHHHHHHhc--CC
Confidence 5889999999999999888766666543 466665 333222222 12221 124 3332 222223321 24
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 208 g~Dvv~d~~g~ 218 (349)
T 4a27_A 208 GVDIVLDCLCG 218 (349)
T ss_dssp CEEEEEEECC-
T ss_pred CceEEEECCCc
Confidence 79999999874
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.07 Score=43.36 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=32.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+++.|.|+ |.+|.++|..|++.|++ |++.+++++..+.
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la~~G~~--V~~~d~~~~~~~~ 53 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAAATGHT--VVLVDQTEDILAK 53 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHH
Confidence 46888888 78999999999999997 8899998765543
|
| >3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.0031 Score=53.91 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=30.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r 62 (231)
+++||+++|+| .|..|..+++.|.+.|++ .|-+.|+
T Consensus 215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~Gak-VVavsD~ 250 (419)
T 3aoe_E 215 DLRGARVVVQG-LGQVGAAVALHAERLGMR-VVAVATS 250 (419)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCE-EEEEEET
T ss_pred CccCCEEEEEC-cCHHHHHHHHHHHHCCCE-EEEEEcC
Confidence 67899999998 789999999999999998 3337776
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.027 Score=45.90 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=53.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh--------hhcCCCceeEEEecCCChHHHHHHH-
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--------KNRFPERLDVLQLDLTVESTIEASA- 98 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~--------~~~~~~~v~~~~~Dls~~~~v~~~~- 98 (231)
.+++.|.| .|.+|..++..|++.|++ |.+.+|+++..+.+.+. ....-.+...+-.=+.+...++.++
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~ 83 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLS--TWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLF 83 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHh
Confidence 35677886 579999999999999996 88889987665543321 0111122334444455556666665
Q ss_pred --HHHHHHcCCccEEEEccc
Q 026924 99 --KSIKEKYGSLNLLINASG 116 (231)
Q Consensus 99 --~~~~~~~g~id~lv~~ag 116 (231)
+++.+...+=.++|+...
T Consensus 84 ~~~~l~~~l~~g~ivv~~st 103 (303)
T 3g0o_A 84 GEDGVAHLMKPGSAVMVSST 103 (303)
T ss_dssp --CCCGGGSCTTCEEEECSC
T ss_pred ChhhHHhhCCCCCEEEecCC
Confidence 444444444456666554
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=95.08 E-value=0.021 Score=47.07 Aligned_cols=40 Identities=15% Similarity=0.027 Sum_probs=35.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
..+.||++.|.|. |.||+++|+.|...|++ |+..+|+...
T Consensus 135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~--V~~~dr~~~~ 174 (315)
T 3pp8_A 135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFP--LRCWSRSRKS 174 (315)
T ss_dssp CCSTTCCEEEECC-SHHHHHHHHHHHTTTCC--EEEEESSCCC
T ss_pred CCcCCCEEEEEee-CHHHHHHHHHHHHCCCE--EEEEcCCchh
Confidence 4678999999987 58999999999999997 8888887654
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.02 Score=47.48 Aligned_cols=42 Identities=12% Similarity=0.021 Sum_probs=36.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
..+.|+++.|.|. |.||+++++.|...|++ |++.+++.+..+
T Consensus 151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~--V~~~d~~~~~~~ 192 (330)
T 2gcg_A 151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQ--RFLYTGRQPRPE 192 (330)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHGGGTCC--EEEEESSSCCHH
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCCCcchh
Confidence 4678999999987 79999999999999997 888898765443
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.014 Score=47.61 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
..+.|++++|.|+ |+||+++++.|...|++ |++.+|+.+.
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~--V~~~d~~~~~ 192 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGAN--VKVGARSSAH 192 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSHHH
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCE--EEEEECCHHH
Confidence 3678999999996 89999999999999996 8888987644
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=94.94 E-value=0.13 Score=42.51 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=68.5
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc---CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~---~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+.+++.|+|+ |.+|.+++..|+..|.-..|++.|.+++.++.....+.. +......... .|.+
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---------- 83 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---------- 83 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----------
Confidence 35678999997 899999999999988722599999987655553222221 1111111111 1221
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
.+..-|++|..+|... .+ ..+. .+.++.|..-...+.+.+..+ . .. +.+++++-.
T Consensus 84 -~~~~aDiVvi~aG~~~--------kp--G~tR---~dL~~~N~~I~~~i~~~i~~~-~--p~------a~vlvvtNP 138 (331)
T 4aj2_A 84 -VTANSKLVIITAGARQ--------QE--GESR---LNLVQRNVNIFKFIIPNVVKY-S--PQ------CKLLIVSNP 138 (331)
T ss_dssp -GGTTEEEEEECCSCCC--------CT--TCCG---GGGHHHHHHHHHHHHHHHHHH-C--TT------CEEEECSSS
T ss_pred -HhCCCCEEEEccCCCC--------CC--CccH---HHHHHHHHHHHHHHHHHHHHH-C--CC------eEEEEecCh
Confidence 2347899999998642 11 1111 134666665555555555443 1 11 367766644
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.17 Score=42.36 Aligned_cols=74 Identities=11% Similarity=0.137 Sum_probs=50.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.+++||+|+ |.+|+.+++.+.+.|++ +++++.++.... ... .+ ..+..|..|.+.+.+++++.
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~--v~~~~~~~~~~~--~~~----~d--~~~~~~~~d~~~l~~~~~~~----- 73 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVE--VIAVDRYADAPA--MHV----AH--RSHVINMLDGDALRRVVELE----- 73 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCE--EEEEESSTTCGG--GGG----SS--EEEECCTTCHHHHHHHHHHH-----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEECCCCCch--hhh----cc--ceEECCCCCHHHHHHHHHHc-----
Confidence 4578999987 47999999999999997 777776543311 111 11 23456777877776666543
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|+++....
T Consensus 74 ~~d~v~~~~e 83 (391)
T 1kjq_A 74 KPHYIVPEIE 83 (391)
T ss_dssp CCSEEEECSS
T ss_pred CCCEEEECCC
Confidence 6899987554
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.25 Score=35.54 Aligned_cols=84 Identities=15% Similarity=0.068 Sum_probs=50.7
Q ss_pred CeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 28 GGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 28 ~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+.+.|.|+| +.+|..+++.|.+.|++ |+-.+.+...... ...........+....+=+ -.+.+.++++++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v-p~~~~~~vv~~~~ 98 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV-KPKLTMEYVEQAI 98 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGCSSCCSEEEECS-CHHHHHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe-CHHHHHHHHHHHH
Confidence 6789999998 78999999999999996 6655443322111 1111222233333333322 3467777787776
Q ss_pred HHcCCccEEEEccc
Q 026924 103 EKYGSLNLLINASG 116 (231)
Q Consensus 103 ~~~g~id~lv~~ag 116 (231)
+. .+..++...|
T Consensus 99 ~~--gi~~i~~~~g 110 (144)
T 2d59_A 99 KK--GAKVVWFQYN 110 (144)
T ss_dssp HH--TCSEEEECTT
T ss_pred Hc--CCCEEEECCC
Confidence 64 3456665555
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=94.88 E-value=0.081 Score=45.23 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=50.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++-+++|+++|.|++ .+|+.+++.+.+.|++ |++++.+..... ... .+ ..+..|..|.+.+.++++
T Consensus 30 ~~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~--v~v~d~~~~~p~--~~~----ad--~~~~~~~~d~~~l~~~a~--- 95 (419)
T 4e4t_A 30 SPILPGAWLGMVGGG-QLGRMFCFAAQSMGYR--VAVLDPDPASPA--GAV----AD--RHLRAAYDDEAALAELAG--- 95 (419)
T ss_dssp CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCTTCHH--HHH----SS--EEECCCTTCHHHHHHHHH---
T ss_pred ccCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEECCCCcCch--hhh----CC--EEEECCcCCHHHHHHHHh---
Confidence 345689999999875 7999999999999997 667665543211 111 11 234578888888777762
Q ss_pred HHcCCccEEEE
Q 026924 103 EKYGSLNLLIN 113 (231)
Q Consensus 103 ~~~g~id~lv~ 113 (231)
++|+++.
T Consensus 96 ----~~D~V~~ 102 (419)
T 4e4t_A 96 ----LCEAVST 102 (419)
T ss_dssp ----HCSEEEE
T ss_pred ----cCCEEEE
Confidence 4788873
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.033 Score=51.67 Aligned_cols=76 Identities=13% Similarity=0.109 Sum_probs=48.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|.++||.||+|++|.+.+......|++ |+.+++++ +.+.+. .+.+.. .|-++.+- .+++.+.-
T Consensus 345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~--V~~t~~~~-k~~~l~-----lga~~v---~~~~~~~~----~~~i~~~t~ 409 (795)
T 3slk_A 345 PGESLLVHSAAGGVGMAAIQLARHLGAE--VYATASED-KWQAVE-----LSREHL---ASSRTCDF----EQQFLGATG 409 (795)
T ss_dssp TTCCEEEESTTBHHHHHHHHHHHHTTCC--EEEECCGG-GGGGSC-----SCGGGE---ECSSSSTH----HHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHcCCE--EEEEeChH-Hhhhhh-----cChhhe---eecCChhH----HHHHHHHcC
Confidence 5889999999999999999888889997 77776544 222221 232211 24333332 23333322
Q ss_pred -CCccEEEEcccc
Q 026924 106 -GSLNLLINASGI 117 (231)
Q Consensus 106 -g~id~lv~~ag~ 117 (231)
..+|+++++.|.
T Consensus 410 g~GvDvVld~~gg 422 (795)
T 3slk_A 410 GRGVDVVLNSLAG 422 (795)
T ss_dssp SSCCSEEEECCCT
T ss_pred CCCeEEEEECCCc
Confidence 369999998863
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.14 Score=37.00 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=51.0
Q ss_pred CeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCC--CCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 28 GGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNP--NGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 28 ~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~--~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+.+.|.|+| +.+|..+++.|.+.|++ |+..+.+. +.... ...........+.....=+. .+.+.+++++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~--v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~ 89 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH--VIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE 89 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCC--EEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCE--EEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence 4678999998 68999999999999997 77766654 32211 11112222333444443344 4677787877
Q ss_pred HHHHcCCccEEEEcc
Q 026924 101 IKEKYGSLNLLINAS 115 (231)
Q Consensus 101 ~~~~~g~id~lv~~a 115 (231)
+.+. .+..++...
T Consensus 90 ~~~~--g~~~i~i~~ 102 (145)
T 2duw_A 90 AIAI--GAKTLWLQL 102 (145)
T ss_dssp HHHH--TCCEEECCT
T ss_pred HHHc--CCCEEEEcC
Confidence 7653 344455444
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.019 Score=46.73 Aligned_cols=39 Identities=21% Similarity=0.282 Sum_probs=34.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.+.|++++|.|+ |+||+++++.|...|++ |++.+|+.+.
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~--V~~~dr~~~~ 190 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAK--VKVGARESDL 190 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSHHH
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCE--EEEEECCHHH
Confidence 578999999995 79999999999999996 8888987654
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.045 Score=45.67 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=33.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+++++.++|.|+ ||+|..+++.|+..|.. .+.++|.+.
T Consensus 32 ~~L~~~~VlivG~-GGlG~~ia~~La~~Gvg-~itlvD~d~ 70 (346)
T 1y8q_A 32 KRLRASRVLLVGL-KGLGAEIAKNLILAGVK-GLTMLDHEQ 70 (346)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCB
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEECCC
Confidence 3677899999996 58999999999999998 788887654
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.2 Score=42.68 Aligned_cols=74 Identities=14% Similarity=0.128 Sum_probs=50.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
..+++||+|+ |.+|+.+++.+.+.|++ ++.++.++.... ... .. ..+..|..|.+.+.+++++.
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~--v~~v~~~~~~~~--~~~----ad--~~~~~~~~d~~~l~~~~~~~----- 81 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQRLGVE--VVAVDRYANAPA--MQV----AH--RSYVGNMMDKDFLWSVVERE----- 81 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHHTTCE--EEEEESSTTCHH--HHH----SS--EEEESCTTCHHHHHHHHHHH-----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEECCCCChh--hhh----cc--eEEECCCCCHHHHHHHHHHc-----
Confidence 3568999987 57999999999999997 777776543311 111 11 23556888877776666542
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
++|+++...+
T Consensus 82 ~~d~V~~~~e 91 (433)
T 2dwc_A 82 KPDAIIPEIE 91 (433)
T ss_dssp CCSEEEECSS
T ss_pred CCCEEEECcc
Confidence 7899987654
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.53 Score=38.54 Aligned_cols=106 Identities=14% Similarity=0.147 Sum_probs=59.4
Q ss_pred EEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++.|+||+|.+|.+++..|+.. +.-..+++.|.++ ..+....++......+......-++. .+.+..-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~----------~~~~~~a 70 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA----------TPALEGA 70 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCC----------HHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCc----------HHHhCCC
Confidence 5889999999999999999886 5422589999887 33332222222222222111100111 1223478
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
|++|..+|... .+ ..+. .+.++.|..-...+.+.+..+
T Consensus 71 Divii~ag~~r--------kp--G~~R---~dll~~N~~I~~~i~~~i~~~ 108 (312)
T 3hhp_A 71 DVVLISAGVAR--------KP--GMDR---SDLFNVNAGIVKNLVQQVAKT 108 (312)
T ss_dssp SEEEECCSCSC--------CT--TCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCC--------CC--CCCH---HHHHHHHHHHHHHHHHHHHHH
Confidence 99999998642 21 1122 234666666555555555443
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.099 Score=44.68 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=31.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
..++|.|. |.+|+.+++.|.+.|.. |++++++++..+.
T Consensus 5 ~~viIiG~-Gr~G~~va~~L~~~g~~--vvvId~d~~~v~~ 42 (413)
T 3l9w_A 5 MRVIIAGF-GRFGQITGRLLLSSGVK--MVVLDHDPDHIET 42 (413)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCHHHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCC--EEEEECCHHHHHH
Confidence 35888987 78999999999999998 8888888765443
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=94.61 E-value=0.12 Score=42.44 Aligned_cols=37 Identities=24% Similarity=-0.004 Sum_probs=31.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++.+++.|+|+ |.+|.+++..|+..|. ..|.+.|+++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~-~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKEL-ADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCGG
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccc
Confidence 45678999997 8999999999999998 2499999983
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=94.60 E-value=0.11 Score=42.64 Aligned_cols=43 Identities=26% Similarity=0.213 Sum_probs=33.6
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+..+++.|.| .|.+|.++++.|.+.|+...|++.+|+++..+.
T Consensus 31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~ 73 (314)
T 3ggo_A 31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISK 73 (314)
T ss_dssp CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHH
T ss_pred cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHH
Confidence 3446899998 689999999999999982238889998755443
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.059 Score=43.45 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=32.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~ 64 (231)
.+++||.++|.|++.-+|+.++..|.+. |+. |.++.++.
T Consensus 154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at--Vtv~h~~t 194 (281)
T 2c2x_A 154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT--VTLCHTGT 194 (281)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE--EEEECTTC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE--EEEEECch
Confidence 3678999999999988899999999999 785 77775544
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.21 Score=40.55 Aligned_cols=84 Identities=19% Similarity=0.150 Sum_probs=45.6
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh-------hcCCCceeEEEecCCChHHHHHHH-HHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASA-KSI 101 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~Dls~~~~v~~~~-~~~ 101 (231)
++-++|- |..|..+|+.|+++|++ |++.+|++++.+.+.+.- ...-.....+-+=+.+...++..+ ..+
T Consensus 7 kIgfIGL-G~MG~~mA~~L~~~G~~--V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~ 83 (297)
T 4gbj_A 7 KIAFLGL-GNLGTPIAEILLEAGYE--LVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMEL 83 (297)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCE--EEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHH
T ss_pred cEEEEec-HHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHH
Confidence 4666654 68999999999999997 889999987776543321 111122233444455666655543 334
Q ss_pred HHHcCCccEEEEccc
Q 026924 102 KEKYGSLNLLINASG 116 (231)
Q Consensus 102 ~~~~g~id~lv~~ag 116 (231)
.....+-+++|.+.-
T Consensus 84 ~~~~~~~~iiid~sT 98 (297)
T 4gbj_A 84 VEKLGKDGVHVSMST 98 (297)
T ss_dssp HHHHCTTCEEEECSC
T ss_pred HhhcCCCeEEEECCC
Confidence 444455566665554
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.053 Score=43.60 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=32.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
++||.++|.|+++-.|+.++..|.+.|+. |.+++++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAt--Vtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYT--VSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCe--EEEEeCC
Confidence 78999999999999999999999999996 7777654
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=0.032 Score=46.35 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=34.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
..+.||++.|.|. |.||+++|+.|...|++ |++.+|+...
T Consensus 160 ~~l~g~~vgIIG~-G~iG~~vA~~l~~~G~~--V~~~dr~~~~ 199 (333)
T 3ba1_A 160 TKFSGKRVGIIGL-GRIGLAVAERAEAFDCP--ISYFSRSKKP 199 (333)
T ss_dssp CCCTTCCEEEECC-SHHHHHHHHHHHTTTCC--EEEECSSCCT
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEECCCchh
Confidence 4678999999986 78999999999999997 8888887654
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.037 Score=44.63 Aligned_cols=84 Identities=20% Similarity=0.123 Sum_probs=51.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-C------CCceeEEEecCCChHHHHHHH---H
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F------PERLDVLQLDLTVESTIEASA---K 99 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~------~~~v~~~~~Dls~~~~v~~~~---~ 99 (231)
++.|.| .|.+|.+++..|++.|++ |.+.+|+++..+.+.+.-.. . -.+...+-.=+.+...++.++ +
T Consensus 3 ~I~iiG-~G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~ 79 (287)
T 3pdu_A 3 TYGFLG-LGIMGGPMAANLVRAGFD--VTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGAN 79 (287)
T ss_dssp CEEEEC-CSTTHHHHHHHHHHHTCC--EEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred eEEEEc-cCHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCch
Confidence 466776 678999999999999997 88889998776654322100 0 011233334445555666666 5
Q ss_pred HHHHHcCCccEEEEccc
Q 026924 100 SIKEKYGSLNLLINASG 116 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag 116 (231)
++.+...+=.++|+...
T Consensus 80 ~l~~~l~~g~~vv~~st 96 (287)
T 3pdu_A 80 GVLEGIGGGRGYIDMST 96 (287)
T ss_dssp CGGGTCCTTCEEEECSC
T ss_pred hhhhcccCCCEEEECCC
Confidence 54444434456665554
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.057 Score=43.64 Aligned_cols=38 Identities=32% Similarity=0.243 Sum_probs=33.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
.+++||.++|.|.++-.|+.++..|++.|+. |.++.+.
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt--Vtv~hs~ 194 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCT--VTVTHRF 194 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCC
Confidence 4678999999999988999999999999996 7776654
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.32 E-value=0.14 Score=44.65 Aligned_cols=39 Identities=15% Similarity=0.122 Sum_probs=31.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+++.|.|+ |.+|.+||..|++.|++ |++.+++++..+..
T Consensus 6 ~kVgVIGa-G~MG~~IA~~la~aG~~--V~l~D~~~e~l~~~ 44 (483)
T 3mog_A 6 QTVAVIGS-GTMGAGIAEVAASHGHQ--VLLYDISAEALTRA 44 (483)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCC--EEEECSCHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHH
Confidence 35666766 78999999999999997 88999988766553
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.17 Score=40.70 Aligned_cols=81 Identities=16% Similarity=0.182 Sum_probs=54.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCc------------------cchhhhhhcCCCceeEEEecCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGA------------------TGLLDLKNRFPERLDVLQLDLT 89 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~------------------~~~~~~~~~~~~~v~~~~~Dls 89 (231)
.++.|.|++|.+|+.+++.+.+. +.+ .+-+++++.... +++.+.+.. .+ +..|++
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~e-Lv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~--~D---VVIDfT 81 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDAT-LVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE--AD---YLIDFT 81 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEE-EEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH--CS---EEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC--CC---EEEEcC
Confidence 47999999999999999999874 555 344467764311 111222221 11 346889
Q ss_pred ChHHHHHHHHHHHHHcCCccEEEEcccc
Q 026924 90 VESTIEASAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 90 ~~~~v~~~~~~~~~~~g~id~lv~~ag~ 117 (231)
.++.....+....+. .+++|+-+.|.
T Consensus 82 ~p~a~~~~~~~al~~--G~~vVigTTG~ 107 (272)
T 4f3y_A 82 LPEGTLVHLDAALRH--DVKLVIGTTGF 107 (272)
T ss_dssp CHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence 999888888877665 67888877774
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 231 | ||||
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-20 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-19 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-16 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 1e-16 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 7e-16 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 1e-15 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 2e-15 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 2e-15 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 2e-15 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 4e-15 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-14 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 4e-14 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 4e-14 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 4e-14 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 7e-14 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 8e-14 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 2e-13 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 2e-13 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-13 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 3e-13 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 6e-13 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 6e-13 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 9e-13 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-12 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 8e-12 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 8e-12 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 2e-11 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 6e-11 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 7e-11 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 1e-10 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 1e-10 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 1e-10 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 1e-10 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 1e-10 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 1e-10 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 1e-10 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-10 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 2e-10 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 3e-10 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-10 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 5e-10 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-09 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 2e-09 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 2e-09 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 4e-09 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 4e-09 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 6e-09 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 8e-09 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 9e-09 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-08 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 1e-07 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 3e-07 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 4e-07 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 1e-06 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-05 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 1e-05 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-05 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-05 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 7e-05 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-05 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-05 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 6e-04 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.002 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 0.002 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 0.003 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 0.004 |
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 84.5 bits (208), Expect = 2e-20
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+V GA+RGIGL +QL++ + +IAT R+ AT +LK+ R+ VL L +T +
Sbjct: 7 VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT---ELKSIKDSRVHVLPLTVTCD 63
Query: 92 STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+++ + E GS L+LLIN +G+ L T + ++ + +VN
Sbjct: 64 KSLDTFVSKVGEIVGSDGLSLLINNAGV------LLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG---------WHSYRASKA 200
+L+ + + PLLK + D V+ + S G + +YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 201 ALNH 204
A+N
Sbjct: 178 AINM 181
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.3 bits (203), Expect = 1e-19
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 16/182 (8%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLD 82
+W+ ++LV GAS GIG A+ L+++ K V+ R L +P L
Sbjct: 7 RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLI 64
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
+ DL+ E I + +I+ ++ +++ IN +G+ TL S +
Sbjct: 65 PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL-------ARPDTLLSGSTSGWKDMF 117
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VN + + + +K + N+++ G L H Y A+K A+
Sbjct: 118 NVNVLALSICTREAYQSMKERNVDDGH----IININSMSGHRV-LPLSVTHFYSATKYAV 172
Query: 203 NH 204
Sbjct: 173 TA 174
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.9 bits (181), Expect = 1e-16
Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 20/179 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G + L+ GA GIG A + + K ++ N +G ++ +
Sbjct: 6 TGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVV 63
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLIN-ASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D + I +SAK +K + G +++L+N A + + + + K +EVN
Sbjct: 64 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT--------FEVN 115
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ K P + G + VA+ + V +Y +SK A
Sbjct: 116 VLAHFWTTKAFLPAMTKNNHGH---IVTVASAAGHVSV------PFLLAYCSSKFAAVG 165
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 74.2 bits (182), Expect = 1e-16
Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 17/183 (9%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERL 81
++ V+++ G+S GIG A + K V T R+ + + +
Sbjct: 2 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNV 59
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
+ + D+T ++ + + K+G L++L+N +G + + T + + +
Sbjct: 60 NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL-- 117
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
+N I + K P L I ++ + L A + Y +KAA
Sbjct: 118 -NLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT---------PDFPYYSIAKAA 167
Query: 202 LNH 204
++
Sbjct: 168 IDQ 170
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 72.4 bits (177), Expect = 7e-16
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 16/193 (8%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
+ + V+++ G + GIG AK + K V+ + + + P+ + +
Sbjct: 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFV 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D+T + + + K+G L+++ G+LS E ++ ++
Sbjct: 60 HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR-----VMDI 114
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N G LV KH + ++ G A +++ +A G H Y A+K A+
Sbjct: 115 NVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV--------SHVYTATKHAVLG 166
Query: 205 DKICVSGVWSKEG 217
+ + G
Sbjct: 167 LTTSLCTELGEYG 179
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 71.8 bits (176), Expect = 1e-15
Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 24/178 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G LV G +RGIG A+ + V P G + F Q+
Sbjct: 4 AGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEGKEVAEAIGGAF------FQV 55
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
DL E + G +++L+N + I + + L L + + EVN
Sbjct: 56 DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRR-----VLEVNL 108
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
P+ + + ++ G + VA++ +Y ASK L +
Sbjct: 109 TAPMHLSALAAREMRKVGG---GAIVNVASVQGLFAEQ------ENAAYNASKGGLVN 157
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.4 bits (174), Expect = 2e-15
Identities = 41/202 (20%), Positives = 69/202 (34%), Gaps = 10/202 (4%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LV G ++GIGL + L G V+ T R+ + QLD+
Sbjct: 5 VALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+I A ++++YG L++L+N +GI + + + N G
Sbjct: 64 DLQSIRALRDFLRKEYGGLDVLVNNAGI-------AFKVADPTPFHIQAEVTMKTNFFGT 116
Query: 150 ILVIKHMSPLLKVGG--TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKI 207
V + PL+K G + ++V A S R +
Sbjct: 117 RDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176
Query: 208 CVSGVWSKEGSSYMYSVASRHC 229
GV KEG ++
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIG 198
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 70.8 bits (173), Expect = 2e-15
Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 25/180 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQ 85
+ A GIGL+ +++L+++N K T L +LK P+ +
Sbjct: 4 TNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 86 LDLTV-ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D+TV + + K I ++ ++++LIN +GI + + + +
Sbjct: 62 YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI-------LDDHQIERT--------IAI 106
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N G + + G +A + +++ Y ASKAA+
Sbjct: 107 NFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------HQVPVYSASKAAVVS 160
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 71.2 bits (174), Expect = 2e-15
Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 17/178 (9%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG L+ G + G+G + + + K V ++ A L +L+ + + +
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVAEGAK--VAVLDKS---AERLAELETDHGDNVLGIVG 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+ + +A ++G ++ LI +GI L + + +N
Sbjct: 59 DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF--HINV 116
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G I +K P L + + + + GG Y A+K A+
Sbjct: 117 KGYIHAVKACLPALVASRGNV----IFTISNAGFYPN------GGGPLYTAAKHAIVG 164
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 70.5 bits (172), Expect = 4e-15
Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 19/183 (10%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---KNRFPERL 81
++ G ++ G+S GIG A ++ + V T RN + E++
Sbjct: 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKI 58
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
+ + D+T S + + K+G +++L+N +G + + +K
Sbjct: 59 NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK-----T 113
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
+++N I + + L I ++VA G G+ Y +KAA
Sbjct: 114 FKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVA---------GPQAHSGYPYYACAKAA 164
Query: 202 LNH 204
L+
Sbjct: 165 LDQ 167
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 68.1 bits (166), Expect = 2e-14
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 18/182 (9%)
Query: 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
S + G V+++ G + GIGL A + +E+ K V+ T R+ + P+++
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQ 57
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
Q D + E + ++ +G ++ L+N +GI ++ + +
Sbjct: 58 FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-------AVNKSVEETTTAEWRKLL 110
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
VN G + +K G G + ++++ VG +Y ASK A+
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLG--ASIINMSSIEGFVGDP------SLGAYNASKGAV 162
Query: 203 NH 204
Sbjct: 163 RI 164
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 67.2 bits (164), Expect = 4e-14
Identities = 31/176 (17%), Positives = 65/176 (36%), Gaps = 17/176 (9%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K ++++ G + GIG A++ + + P A R+ ++
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVP--APEAEAAIRNLGRRVLTVKC 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D++ +EA K + +G ++L+N +GI P +++ +E+N
Sbjct: 60 DVSQPGDVEAFGKQVISTFGRCDILVNNAGI-------YPLIPFDELTFEQWKKTFEINV 112
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
L+ K P +K G G NL++ + + S +A+
Sbjct: 113 DSGFLMAKAFVPGMKRNGWGRI------INLTSTTYWLKIEAYTHYISTKAANIGF 162
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 67.7 bits (165), Expect = 4e-14
Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 24/199 (12%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------GATGLLDLKNRFP 78
++ G V LV GA G+G +A E+ V+ + G++ +
Sbjct: 4 RFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIR 61
Query: 79 ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
R + E K+ + +G +++++N +GIL + + +++
Sbjct: 62 RRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-------RDRSFSRISDEDW 114
Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
+ V+ G V + +K G + ++ G G+ G +Y A+
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQNYG------RIIMTASASGIYGNF---GQANYSAA 165
Query: 199 KAALNHDKICVSGVWSKEG 217
K L + K
Sbjct: 166 KLGLLGLANTLVIEGRKNN 184
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 67.3 bits (164), Expect = 4e-14
Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 21/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G ++ G +RG+G E A+Q + + V+ + L
Sbjct: 4 SGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDE---EGAATARELGDAARYQHL 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+T+E + +E++GS++ L+N +GI L E+N
Sbjct: 59 DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI-------STGMFLETESVERFRKVVEINL 111
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G + +K + P +K G G ++V SA G L SY ASK +
Sbjct: 112 TGVFIGMKTVIPAMKDAGGG-----SIVNISSA----AGLMGLALTSSYGASKWGVRG 160
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 66.9 bits (163), Expect = 7e-14
Identities = 27/165 (16%), Positives = 63/165 (38%), Gaps = 12/165 (7%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---KNRFPERL 81
++ ++ G+S GIG A ++ V T R+ + +++
Sbjct: 2 RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQV 59
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSLM 139
+ + D+T E + S +++G +++L+N +G + ++ K+
Sbjct: 60 NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT--- 116
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184
++N I + K + P L I ++VA A+ +
Sbjct: 117 --LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL 159
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 66.2 bits (161), Expect = 8e-14
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
+ +G V+LV G + G+GLE K LL + K V + N L ER +
Sbjct: 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQ---QLAAELGERSMFV 57
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ D++ E+ +++ + G+LN+L+N +GI + ++
Sbjct: 58 RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI-------LLPGDMETGRLEDFSRLLKI 110
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N + + +K G I +A++S+ + + Y ASKAA++
Sbjct: 111 NTESVFIGCQQGIAAMKETGGSI----INMASVSSWLPIE------QYAGYSASKAAVSA 160
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 65.4 bits (159), Expect = 2e-13
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
+G V+LV G SRG+G A+ L E V+ RN A+ L ++ +
Sbjct: 4 RGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFR 61
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D++ ++ +++KEK+G L+ ++NA+GI
Sbjct: 62 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 93
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 2e-13
Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 25/180 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVL 84
G V+LV GA++GIG FA+ LL K K V N + P++ +
Sbjct: 2 NGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFI 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
Q D+ + + + + + + +G L++L+N +G+ + N ++
Sbjct: 60 QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN---------------WEKTLQI 104
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N V I + G + +++L+ + Y ASK +
Sbjct: 105 NLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------AQQPVYCASKHGIVG 158
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 64.7 bits (157), Expect = 3e-13
Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 13/180 (7%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
+V G +RGIGL F + + V R+ A + + + F + Q
Sbjct: 8 VNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D++ + + + I G ++ LI +G+ ++ Y+VN
Sbjct: 66 CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-------SVVKPATELTHEDFAFVYDVN 118
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNH 204
G + ++ L + V +++S+++ + N Y +SKAA ++
Sbjct: 119 VFGVFNTCRAVAKLWLQKQQK--GSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSN 176
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 64.7 bits (156), Expect = 3e-13
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 15/194 (7%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
L+ G +RG+GL K LL + TCRN A L DL + +L++DL
Sbjct: 6 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRN 64
Query: 91 ESTIEA--SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
+ + K LN+L N + + V L+ + N V
Sbjct: 65 FDAYDKLVADIEGVTKDQGLNVLFNN------AGIAPKSARITAVRSQELLDTLQTNTVV 118
Query: 149 PILVIKHMSPLLKVGGTG-----IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
PI++ K PLLK + A + N+S+ +GSI N GG ++YR SK+ALN
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178
Query: 204 HDKICVSGVWSKEG 217
+S +
Sbjct: 179 AATKSLSVDLYPQR 192
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 63.6 bits (154), Expect = 6e-13
Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 21/180 (11%)
Query: 30 VSLVQGASRGIGLEFAKQLLEK-----NDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
+ L+ GA +GIG A + + + ++ + R + D +
Sbjct: 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 62
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D++ + + I E+YG ++ L+N +G+ +
Sbjct: 63 TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYT-------MNT 115
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N G + + + L++ +G + VA A Y SK
Sbjct: 116 NLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------FRHSSIYCMSKFGQRG 166
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 63.9 bits (155), Expect = 6e-13
Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 19/179 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G +LV G SRGIG ++L V RN L +++
Sbjct: 7 EGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVC 64
Query: 87 DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
DL+ S + ++ + G LN+L+N +GI L +N
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGI-------VIYKEAKDYTVEDYSLIMSIN 117
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ P LK G ++ V+ G + Y A+K A++
Sbjct: 118 FEAAYHLSVLAHPFLKASERGNVVFISSVS---------GALAVPYEAVYGATKGAMDQ 167
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.4 bits (154), Expect = 9e-13
Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
++ G V +V G RGIG + + + V+ ++ +G L+ P + +
Sbjct: 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGR---ALEQELPGAV-FI 56
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
D+T E ++ ++G L+ ++N +G P + ET+ + E+
Sbjct: 57 LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQ-----LLEL 110
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
N +G + K P L+ + N+S+ VG+IG Y A+K A+
Sbjct: 111 NLLGTYTLTKLALPYLRKSQGNV-------INISSLVGAIGQA---QAVPYVATKGAVTA 160
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 62.8 bits (152), Expect = 2e-12
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +++ GA GIG E A V+ + N + A ++D + + +
Sbjct: 10 DGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+T E + A A K G +++L+N +G
Sbjct: 68 DITSEQELSALADFAISKLGKVDILVNNAGG 98
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 60.8 bits (147), Expect = 8e-12
Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 19/179 (10%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K LV G ++GIG ++ + RN L + ++
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVC 64
Query: 87 DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
D ++ E +++ + G L++LIN G + L + T N
Sbjct: 65 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTL--DYTAEDFSF-----HISTN 117
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ + PLLK G G ++ +A + + Y A+K ALN
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---------VGSIYSATKGALNQ 167
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 8e-12
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 20/179 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
+G +V GAS+GIG E A L + V+ T R+ ++ +
Sbjct: 13 QGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIA 70
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
+ + E + G L++LI L + + + EVN
Sbjct: 71 GTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT-------NTSLNLFHDDIHHVRKSMEVN 123
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ +++ P+LK I VV++L+ +V +Y ASK AL+
Sbjct: 124 FLSYVVLTVAALPMLKQSNGSIV----VVSSLAGKVAY------PMVAAYSASKFALDG 172
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 59.8 bits (144), Expect = 2e-11
Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 18/191 (9%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V+L GA RGIG A +L + V+ + A ++ + + +Q
Sbjct: 5 AGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D++ S + A +G L+ +++ SG+ + L E T +K + +N
Sbjct: 64 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL--EVTQELFDK-----VFNLNT 116
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDK 206
G V + + GG I + G + Y SKAA+
Sbjct: 117 RGQFFVAQQGLKHCRRGGRIILTSSIA----AVMTG------IPNHALYAGSKAAVEGFC 166
Query: 207 ICVSGVWSKEG 217
+ +G
Sbjct: 167 RAFAVDCGAKG 177
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 58.6 bits (141), Expect = 6e-11
Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLD 82
++ V L+ G G+G A +L + K + + G L+ +
Sbjct: 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVL 58
Query: 83 VLQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
D++ E+ +EA + E++G ++ N +G
Sbjct: 59 TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAG 92
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 58.1 bits (140), Expect = 7e-11
Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 14/125 (11%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+V G+ A +L E V + L +P QL E
Sbjct: 4 IVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEAFAETYP------QLKPMSE 55
Query: 92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
+++ YG +++L++ ++K A E + P
Sbjct: 56 QEPAELIEAVTSAYGQVDVLVSNDIF------APEFQPIDKYAVEDYRGAVEALQIRPFA 109
Query: 152 VIKHM 156
++ +
Sbjct: 110 LVNAV 114
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 1e-10
Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 24/183 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-----LKNRFPERL 81
+G V++V G + GIG K+LLE V+ R D L R+
Sbjct: 11 QGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARV 68
Query: 82 DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
+Q ++ E + KS + +G +N L+N G Q + +
Sbjct: 69 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG-------QFLSPAEHISSKGWHAV 121
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
E N G + K + G V + + G A++A
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGSI----VNIIVPTKAGF------PLAVHSGAARAG 171
Query: 202 LNH 204
+ +
Sbjct: 172 VYN 174
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 57.8 bits (139), Expect = 1e-10
Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 20/179 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQ 85
+G V+LV GA RGIG E A +L + K VI N A ++ + ++
Sbjct: 17 EGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVK 74
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
++ V I + + +G L+++ + SG+ + V + +N
Sbjct: 75 ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-------VSFGHVKDVTPEEFDRVFTIN 127
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G V + L++GG I + + G +S SK A+
Sbjct: 128 TRGQFFVAREAYKHLEIGGRLI--------LMGSITGQAKAVPKHAVYS--GSKGAIET 176
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 57.4 bits (138), Expect = 1e-10
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
V+LV GA+ GIGLE A++L ++ + V R G L D D
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCD 59
Query: 88 LTVESTIEASAKSIKEKYGSLNLLINASG 116
+ IEA ++ E+YG +++L+N +G
Sbjct: 60 VRSVPEIEALVAAVVERYGPVDVLVNNAG 88
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 57.5 bits (138), Expect = 1e-10
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LV GA +GIG A +L++ V N A + N+ +++D++
Sbjct: 3 VALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVS 60
Query: 90 VESTIEASAKSIKEKYGSLNLLINASG 116
+ A+ + ++ G ++++N +G
Sbjct: 61 DRDQVFAAVEQARKTLGGFDVIVNNAG 87
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 1e-10
Identities = 35/178 (19%), Positives = 64/178 (35%), Gaps = 25/178 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G LV GA +GIG + L + V+A R L+ ++ + +
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCV 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
DL E G ++LL+N + + +V K + ++EVN
Sbjct: 60 DLGDWEATER----ALGSVGPVDLLVNNAAV-------ALLQPFLEVTKEAFDRSFEVNL 108
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
I V + ++ L G + N+S++ + Y ++K AL+
Sbjct: 109 RAVIQVSQIVARGLIARGVPG-----AIVNVSSQCSQR---AVTNHSVYCSTKGALDM 158
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 57.4 bits (138), Expect = 1e-10
Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQ 85
+G V ++ G+S G+G A + + K V+ R+ + A +L+ + ++
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+TVES + +S +++G L+++IN +G+
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 57.0 bits (137), Expect = 1e-10
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G V+LV G +RG+G + ++ + K V+ + + + L
Sbjct: 5 TGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGK---AMAAELADAARYVHL 59
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
D+T + +A+ + +G L++L+N +GI
Sbjct: 60 DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI 90
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 57.2 bits (137), Expect = 2e-10
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL--DLKNRFPERLDVLQLD 87
+++ G +R IG A +L ++ + V+ R+ GA L +L + + D
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGD 60
Query: 88 LTVESTIEASAKSI----KEKYGSLNLLINASGILSIPNVLQPETT----LNKVEKSSLM 139
L++ S++ + I +G ++L+N + +L + T K + +
Sbjct: 61 LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 120
Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
+ NAV P+ +I+ + GG R+++VV A D L G+ Y +K
Sbjct: 121 ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT----DLPLPGFCVYTMAK 176
Query: 200 AALNH 204
AL
Sbjct: 177 HALGG 181
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 56.7 bits (136), Expect = 2e-10
Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD--LKNRFPERLDV 83
V ++ GASRG G A QL G ++ + R+ + L + + ++ +
Sbjct: 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64
Query: 84 LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
DL E+ ++ +++E L + + LN + + + +
Sbjct: 65 AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124
Query: 144 VNAVGPILVIKHMSPLLKVGGTG 166
+N + + +
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPGL 147
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 56.3 bits (135), Expect = 3e-10
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG +LV G S+GIG ++L + V RN L++ ++
Sbjct: 5 KGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVC 62
Query: 87 DLTVESTIEASAKSIKEKY-GSLNLLINA 114
DL + + +++ + G LN+L+N
Sbjct: 63 DLLSRTERDKLMQTVAHVFDGKLNILVNN 91
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 56.3 bits (135), Expect = 3e-10
Identities = 37/188 (19%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V +V GASRGIG A L + K ++ R+ A + + + D++
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
E+ +EA K+ + +G++++++N +GI +++ + + ++N G
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKS-------QWDEVIDLNLTGV 114
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICV 209
L + + ++ G + N+++ VG IG G +Y A+KA +
Sbjct: 115 FLCTQAATKIMMKKRKG------RIINIASVVGLIG---NIGQANYAAAKAGVIGFSKTA 165
Query: 210 SGVWSKEG 217
+ +
Sbjct: 166 AREGASRN 173
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 55.5 bits (133), Expect = 5e-10
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+G ++LV GASRGIG A+ L + K VI T + NGA + + L L
Sbjct: 3 EGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQ---AISDYLGANGKGLML 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
++T ++IE+ + I+ ++G +++L+N +GI +++ + E N
Sbjct: 58 NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-------NDIIETNL 110
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ K + + G + + + VG++G+ GG +Y A+KA L
Sbjct: 111 SSVFRLSKAVMRAMMKKRHG------RIITIGSVVGTMGN---GGQANYAAAKAGLIG 159
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 54.6 bits (131), Expect = 1e-09
Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 24/178 (13%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
K L+ GA+ GIG + ++ + ++A + P + +
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEAVGAHP-----VVM 56
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
D+ +++E G L+ +++ +GI + K+ L VN
Sbjct: 57 DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
G LV K S ++ G A L G +Y AS A +
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL----------GQANYAASMAGVVG 157
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 54.4 bits (130), Expect = 2e-09
Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
+G V+ + G G+G L + + R + + + ++ ++ +Q
Sbjct: 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQ 81
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLIN 113
D+ ++ + + + G N++IN
Sbjct: 82 CDVRDPDMVQNTVSELIKVAGHPNIVIN 109
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 53.9 bits (129), Expect = 2e-09
Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 18/175 (10%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
V+LV GA RGIG E AK L + VI R ++D F D++
Sbjct: 12 VALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVS 69
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
+ I I ++ +++ IL + + +++ N
Sbjct: 70 KKEEISEVINKILTEHKNVD-------ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSL 122
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ + +S + G + N+S+ VG G G +Y +SKA +
Sbjct: 123 FYITQPISKRMINNRYG------RIINISSIVGLTG---NVGQANYSSSKAGVIG 168
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 53.2 bits (127), Expect = 4e-09
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G LV GA+ GIG + ++A R L + +
Sbjct: 4 SGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREER---LLAEAVAALEAEAIAVVA 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASG 116
D++ +EA E++G L+ + + +G
Sbjct: 59 DVSDPKAVEAVFAEALEEFGRLHGVAHFAG 88
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 52.9 bits (126), Expect = 4e-09
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL--DLKNRFPERLDVL 84
KG V++V G++ GIGL A L + ++ + L + ++
Sbjct: 3 KGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
DL+ + + + G +++L+N
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVN 89
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 52.5 bits (125), Expect = 6e-09
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
K+ G V LV GA IGL A +L E+ + N
Sbjct: 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSY 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLN 109
D+T E + + S+ +G ++
Sbjct: 60 VCDVTSEEAVIGTVDSVVRDFGKID 84
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 52.2 bits (124), Expect = 8e-09
Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 19/193 (9%)
Query: 27 KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
G +LV G + R +G A +L E G +A + +
Sbjct: 7 SGKKALVMGVTNQRSLGFAIAAKLKE---AGAEVALSYQAERLRPEAEKLAEALGGALLF 63
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ D+T + ++A +KE +G L+ L++ ++ E + +LA EV
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVH---AIAFAPREAMEGRYIDTRRQDWLLALEV 120
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+A + V + PLL+ GG + L+ + ++ +KAAL
Sbjct: 121 SAYSLVAVARRAEPLLREGGGIV--------TLTYYASEKV---VPKYNVMAIAKAALEA 169
Query: 205 DKICVSGVWSKEG 217
++ +G
Sbjct: 170 SVRYLAYELGPKG 182
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 52.1 bits (124), Expect = 9e-09
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +L+ G++RGIG FA+ + + + V N A + L
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVREGAR--VAIADINLEAAR---ATAAEIGPAACAIAL 58
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLIN 113
D+T +++I+ + +++GS+++L+N
Sbjct: 59 DVTDQASIDRCVAELLDRWGSIDILVN 85
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.1 bits (122), Expect = 2e-08
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 25/178 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
G +LV GA +GIG + K L K V+A R + L+ L P ++ + +
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRT---NSDLVSLAKECP-GIEPVCV 57
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
DL E G ++LL+N + + +V K + ++ VN
Sbjct: 58 DLGDWDATEK----ALGGIGPVDLLVNNAAL-------VIMQPFLEVTKEAFDRSFSVNL 106
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
V + ++ + N+S+ V + +Y ++K A+
Sbjct: 107 RSVFQVSQMVAR-----DMINRGVPGSIVNVSSMVAHVT---FPNLITYSSTKGAMTM 156
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 48.6 bits (115), Expect = 1e-07
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
LV G +RGIGL A++L K V T R P+ L +++
Sbjct: 6 VSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGA-----------PKGLFGVEV 52
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLIN 113
D+T ++ + +++E G + +L++
Sbjct: 53 DVTDSDAVDRAFTAVEEHQGPVEVLVS 79
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 47.5 bits (112), Expect = 3e-07
Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 21/175 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+LV G + G+G A L + + V+ G E L ++ D+T
Sbjct: 3 SALVTGGASGLGRAAALALKARGYR--VVVLDLRREG------------EDLIYVEGDVT 48
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
E + + +E+ ++ A L+ + + + + L EVN +G
Sbjct: 49 REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVL----EVNLLGT 104
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
V++ + ++ E V+ N ++ G G +Y ASK +
Sbjct: 105 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---QIGQAAYAASKGGVVA 156
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 4e-07
Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 22/179 (12%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRF---PERLDVLQ 85
V L+ G S GIGL A +L + V AT R+ L + P L+ LQ
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
LD+ ++ A+ + + E +L L L + + ++ +VN
Sbjct: 64 LDVRDSKSVAAARERVTEGR---------VDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
VG + +++ P +K G+G V L L Y ASK AL
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG---------LPFNDVYCASKFALEG 164
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 45.7 bits (107), Expect = 1e-06
Identities = 35/200 (17%), Positives = 61/200 (30%), Gaps = 27/200 (13%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
+ ++ G + GIG K L + ++ A + DL
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRD--AEVIADLSTA------------- 45
Query: 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA-------Y 142
E +A A + + ++ L+ +G+ VL ++N + LM A
Sbjct: 46 -EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104
Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
A I + + + A A V G+ GG +Y SK AL
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ--GGNLAYAGSKNAL 162
Query: 203 NHDKICVSGVWSKEGSSYMY 222
+ W + G
Sbjct: 163 TVAVRKRAAAWGEAGVRLNT 182
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 43.1 bits (100), Expect = 1e-05
Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 19/106 (17%)
Query: 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-------------- 75
V+LV GA++ +G A+ L + + R+ A L N
Sbjct: 4 VALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADL 62
Query: 76 ----RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
P +T+ + + +G ++L+N +
Sbjct: 63 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS 108
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 1e-05
Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 32/183 (17%)
Query: 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
+ G V ++ A++GIG A + K VIAT N + L LDV
Sbjct: 3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEKYPGIQTRVLDV- 59
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
T + + L++L N +G T+ E+ + +
Sbjct: 60 --------TKKKQIDQFANEVERLDVLFNVAGF-------VHHGTVLDCEEKDWDFSMNL 104
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS---YRASKAA 201
N L+IK P + +G +++ VA + + G + Y +KAA
Sbjct: 105 NVRSMYLMIKAFLPKMLAQKSGNIINMSSVA-----------SSVKGVVNRCVYSTTKAA 153
Query: 202 LNH 204
+
Sbjct: 154 VIG 156
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 42.3 bits (99), Expect = 2e-05
Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 33/178 (18%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+ LV ASRGIG A L ++ + V RN +L R R V
Sbjct: 3 RDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNE-------ELLKRSGHRYVV--C 51
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
DL + EK +++L+ +G +++ A +
Sbjct: 52 DLR------KDLDLLFEKVKEVDILVLNAGG-------PKAGFFDELTNEDFKEAIDSLF 98
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ I ++++ P +K G G + + + + ++ +++ AL
Sbjct: 99 LNMIKIVRNYLPAMKEKGWGRIVAITSFS---------VISPIENLYTSNSARMALTG 147
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 2e-05
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 9/178 (5%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
KG V+++ G + G+GL A++L+ + + +G
Sbjct: 4 KGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61
Query: 87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
T A AK + +++ + +VN
Sbjct: 62 SEKDVQTALALAKGKFGRVDV----AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 117
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+G VI+ ++ + V+ N ++ G G +Y ASK +
Sbjct: 118 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG---QVGQAAYSASKGGIVG 172
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 40.4 bits (93), Expect = 7e-05
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 26 WK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
WK G LV G + G+G + A+ L + ++ R+ A G +L
Sbjct: 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAE 56
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.2 bits (93), Expect = 7e-05
Identities = 14/175 (8%), Positives = 44/175 (25%), Gaps = 31/175 (17%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
+V G +G + + V+ + N + ++ +
Sbjct: 6 IVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQ----------ADSNILVDGNKNWT 53
Query: 92 STIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
++ + + ++ + + +K + L + +
Sbjct: 54 EQEQSILEQTASSLQGSQVDGVFCV------AGGWAGGSASSKDFVKNADLMIKQSVWSS 107
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
+ K + + ++ A Y +KAA++H
Sbjct: 108 AIAAKLATT--------HLKPGGLLQLTGAAAAMGPTPS---MIGYGMAKAAVHH 151
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.2 bits (93), Expect = 7e-05
Identities = 21/181 (11%), Positives = 50/181 (27%), Gaps = 33/181 (18%)
Query: 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
+ LV G +G + +N V + N ++++
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKM 48
Query: 87 DLTVESTIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
+ + + + G ++ ++ +G + N N L ++
Sbjct: 49 TDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKN------CDLMWKQ 102
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
+ + + LK GG G+ + G Y +K A++
Sbjct: 103 SIWTSTISSHLATKHLKEGGLLT------------LAGAKAALDGTPGMIGYGMAKGAVH 150
Query: 204 H 204
Sbjct: 151 Q 151
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 37.9 bits (86), Expect = 6e-04
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72
LV GAS G K+L E +DK R+ G +
Sbjct: 7 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG 47
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 36.7 bits (83), Expect = 0.002
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERL 81
V +G + LV GA+ + +QLLE K V T R+ + L
Sbjct: 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFE 64
Query: 82 DVLQLDLT 89
+ D+
Sbjct: 65 TAVVEDML 72
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 36.4 bits (82), Expect = 0.002
Identities = 10/64 (15%), Positives = 17/64 (26%), Gaps = 3/64 (4%)
Query: 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
W+G V G + G + L V L + R + +
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETA-RVADGMQSEI 62
Query: 86 LDLT 89
D+
Sbjct: 63 GDIR 66
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 35.4 bits (80), Expect = 0.003
Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 27 KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
KG L+ G + + I A+ + + T N + + + V
Sbjct: 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNESLEKRVRPIAQELNSPY-VY 60
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
+LD++ E ++ S+K+ GSL+ ++++
Sbjct: 61 ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA 92
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 35.3 bits (80), Expect = 0.004
Identities = 25/193 (12%), Positives = 60/193 (31%), Gaps = 18/193 (9%)
Query: 27 KGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
G LV G + I A+ + + + + T +N + + + + +
Sbjct: 4 SGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61
Query: 85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
S A+ K + + P +N V + +A+++
Sbjct: 62 CDVAEDASIDTMFAELGKVWPKFDGFVHSIGF---APGDQLDGDYVNAVTREGFKIAHDI 118
Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNH 204
++ + + K +L G + LS + ++ +KA+L
Sbjct: 119 SSYSFVAMAKACRSMLNPGS--------ALLTLSYLGAERA---IPNYNVMGLAKASLEA 167
Query: 205 DKICVSGVWSKEG 217
+ ++ EG
Sbjct: 168 NVRYMANAMGPEG 180
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 231 | |||
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.97 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.97 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.97 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.97 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.97 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.97 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.93 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.81 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.77 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.7 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.68 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.68 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.67 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.65 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.64 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.63 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.62 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.59 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.58 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.57 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.56 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.56 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.53 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.53 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.52 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.51 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.5 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.49 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.47 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.42 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.36 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.25 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.2 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.15 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.03 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.97 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.96 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.94 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 98.88 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.14 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.85 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.81 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.77 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.72 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.7 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.66 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.59 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.59 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.57 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.56 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.5 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.47 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.46 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.43 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.39 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.32 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.28 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.28 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.25 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.24 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.23 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.13 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.11 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 97.09 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 97.04 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.03 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.01 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.0 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.94 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.86 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.83 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.82 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.81 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.79 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.78 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.77 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.76 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.73 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.71 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.66 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.62 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.61 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.56 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.51 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.34 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.32 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.29 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.24 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.21 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.16 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.1 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.09 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.09 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.06 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.03 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.99 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.91 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.89 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 95.85 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.72 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.64 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.6 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.51 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.47 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.46 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.45 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.43 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.37 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 95.32 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.18 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 95.02 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 94.92 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.87 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.72 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.7 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.67 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 94.59 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 94.58 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.58 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.54 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.52 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.45 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 94.44 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.43 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 94.32 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.14 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.13 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.12 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.04 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 94.02 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.86 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.71 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.6 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 93.53 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 93.14 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 93.06 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 92.8 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 92.75 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 92.75 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 92.4 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 92.22 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 92.22 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 92.04 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 91.92 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 91.9 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 91.79 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 91.77 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 91.65 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.55 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 91.18 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.15 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 91.02 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 90.98 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.98 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 90.95 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 90.92 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 90.6 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 90.56 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 90.37 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 90.26 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 90.19 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 89.97 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 89.89 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 89.86 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 89.74 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 89.7 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 89.51 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 89.47 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 89.47 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 89.42 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 89.4 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 89.32 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.24 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 89.18 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 89.17 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 89.07 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 88.97 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 88.92 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 88.91 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 88.86 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.81 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 88.59 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 88.5 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 88.49 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.09 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 88.0 | |
| d1v71a1 | 318 | Hypothetical protein C320.14 (SPCC320.14, SPCC330. | 87.99 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.94 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 87.76 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 87.7 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 87.57 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 87.47 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 87.33 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 87.26 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 87.18 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 86.9 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 86.79 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 86.65 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 86.5 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.56 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 85.54 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 85.51 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 85.47 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 85.42 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 85.16 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 84.95 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 84.84 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 84.78 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 84.6 | |
| d1m1na_ | 477 | Nitrogenase iron-molybdenum protein, alpha chain { | 84.34 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 83.54 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 82.87 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 82.28 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 82.21 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 82.19 | |
| d1qh8b_ | 519 | Nitrogenase iron-molybdenum protein, beta chain {K | 82.17 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 81.79 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 81.37 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 81.22 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 81.2 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 81.06 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 80.98 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 80.75 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 80.73 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 80.16 |
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=6.5e-45 Score=293.17 Aligned_cols=186 Identities=19% Similarity=0.312 Sum_probs=169.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|++. +...+..+..+.++.+++||++|+++++++++++.++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~--V~~~~~~~~--~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVPA--PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCC--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCch--HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 589999999999999999999999999997 888999764 2334455566789999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||+||||||+. +..++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+..
T Consensus 78 ~G~iDilVnnAG~~-------~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Iv~isS~~~~~ 144 (247)
T d2ew8a1 78 FGRCDILVNNAGIY-------PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTYWL 144 (247)
T ss_dssp HSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGGS
T ss_pred cCCCCEEEECCCCC-------CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCC------Cccccccchhcc
Confidence 99999999999987 57789999999999999999999999999999999998765 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++.+|++||+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 145 ~---~~~~~~Y~asKaal~~ltk~lA~ela~~gIr-VN~I~PG~i~T 187 (247)
T d2ew8a1 145 K---IEAYTHYISTKAANIGFTRALASDLGKDGIT-VNAIAPSLVRT 187 (247)
T ss_dssp C---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCC--
T ss_pred c---CcccccchhhhccHHHHHHHHHHHhcccCeE-EEEEeeCCCCC
Confidence 7 7888999999999999999999999999999 78999999974
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=6.3e-45 Score=294.96 Aligned_cols=189 Identities=17% Similarity=0.246 Sum_probs=172.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-c-CCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-R-FPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-~-~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++.+.+.+. . .+.++.+++||++|+++++++++++.
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 78 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 78 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence 479999999999999999999999999997 9999999888777554432 2 34589999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|+||+||||||+.. +..++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+
T Consensus 79 ~~~G~iDiLVnnAG~~~------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Ii~isS~~~ 146 (258)
T d1iy8a_ 79 ERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG------MVVNTASVGG 146 (258)
T ss_dssp HHHSCCSEEEECCCCCC------CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGG
T ss_pred HHhCCCCEEEECCcccc------cCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCC------CCcccccHhh
Confidence 99999999999999764 46778999999999999999999999999999999988876 9999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++.+|+++|+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 147 ~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~i~PG~v~T 191 (258)
T d1iy8a_ 147 IRG---IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR-INAIAPGAIWT 191 (258)
T ss_dssp TSB---CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred ccC---CCCchHHHHHHHHHHHHHHHHHHHhCccCce-EEEEeeCcccC
Confidence 877 7889999999999999999999999999999 88999999975
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.1e-45 Score=295.02 Aligned_cols=189 Identities=20% Similarity=0.258 Sum_probs=174.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.|+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.++++..+.++.+++||++++++++++++++.
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~ 83 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999997 9999999988888877777778899999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|+||++|||||+.. ..++ +.+.++|++.+++|+.++++++|+++|+|.+++.| +||+++|..+
T Consensus 84 ~~~g~iDilvnnAG~~~-------~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~Ii~isS~~~ 149 (255)
T d1fmca_ 84 SKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAA 149 (255)
T ss_dssp HHHSSCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred HHcCCCCEeeeCCcCCC-------CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccc------ccccccccch
Confidence 99999999999999863 3344 68899999999999999999999999999998865 9999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++.+|+++|+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 150 ~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~I~PG~i~T 194 (255)
T d1fmca_ 150 ENK---NINMTSYASSKAAASHLVRNMAFDLGEKNIR-VNGIAPGAILT 194 (255)
T ss_dssp TCC---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECSBCS
T ss_pred hcc---ccccccchhHHHHHHHHHHHHHHHhCccCeE-EEEeeeCcCcC
Confidence 877 7889999999999999999999999999999 78999999975
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=4.4e-45 Score=296.29 Aligned_cols=189 Identities=19% Similarity=0.208 Sum_probs=176.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|+.|+++|++ |++++|+++.++.+.++++..+.++.+++||++++++++++++++.++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 999999988888887777777889999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||++|||||... +..++.+.+.++|++.+++|+.++++++|+++|.|.+++.| +||+++|..+..
T Consensus 80 ~g~iDilVnnaG~~~------~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G------~II~isS~~~~~ 147 (260)
T d1zema1 80 FGKIDFLFNNAGYQG------AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG------RIVNTASMAGVK 147 (260)
T ss_dssp HSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHS
T ss_pred hCCCCeehhhhcccc------ccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCC------CCCeeechhhcc
Confidence 999999999999764 45789999999999999999999999999999999888765 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++.+|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 148 ~---~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~v~T 190 (260)
T d1zema1 148 G---PPNMAAYGTSKGAIIALTETAALDLAPYNIR-VNAISPGYMGP 190 (260)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCS
T ss_pred C---CcchHHHHHHHHHHHHHHHHHHHHhhhhCCE-EEEeccCcccC
Confidence 7 7889999999999999999999999999999 88999999975
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.9e-45 Score=295.14 Aligned_cols=189 Identities=21% Similarity=0.242 Sum_probs=176.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..++||++|||||++|||+++|++|+++|++ |++++|+++.++.+.++++..+.++.++++|++++++++++++++.+
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~--V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 83 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 83 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSE--EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999997 99999999888888777777788999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||++|||||.. ...++.+.+.++|++++++|+.++++++|+++|.|++++.| +||++||..+.
T Consensus 84 ~~g~iDilvnnag~~-------~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~IVnisS~~~~ 150 (251)
T d2c07a1 84 EHKNVDILVNNAGIT-------RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG------RIINISSIVGL 150 (251)
T ss_dssp HCSCCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE------EEEEECCTHHH
T ss_pred hcCCceeeeeccccc-------cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCe------EEEEECCHHhc
Confidence 999999999999987 46778889999999999999999999999999999988775 99999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .++..+|++||+|+++|+|+++.|++++||| +|+|+||.+++
T Consensus 151 ~~---~~~~~~Y~asKaal~~ltr~lA~el~~~gIr-VN~V~PG~v~T 194 (251)
T d2c07a1 151 TG---NVGQANYSSSKAGVIGFTKSLAKELASRNIT-VNAIAPGFISS 194 (251)
T ss_dssp HC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred CC---CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeE-EEEEccCCEec
Confidence 77 7888999999999999999999999999999 88999999985
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-44 Score=291.40 Aligned_cols=189 Identities=23% Similarity=0.345 Sum_probs=171.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh-hhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+.+.+++..+ +.+..+.++.++++|++++++++++++++.+
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 9999999887777544 4455577899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||+. +..++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+.
T Consensus 80 ~~g~iDiLVnnAG~~-------~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~i~S~~~~ 146 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGIN-------RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP------SIINIGSLTVE 146 (251)
T ss_dssp HHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC------EEEEECCGGGT
T ss_pred HcCCCCEEEECCCCC-------CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccc------cccccccchhc
Confidence 999999999999986 47789999999999999999999999999999999988876 99999997764
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
... .+++.+|+++|+|+++|+++++.|++++||| +|+|+||.+++
T Consensus 147 ~~~--~~~~~~Y~asKaal~~lt~~lA~e~~~~gIr-VN~I~PG~i~T 191 (251)
T d1vl8a_ 147 EVT--MPNISAYAASKGGVASLTKALAKEWGRYGIR-VNVIAPGWYRT 191 (251)
T ss_dssp CCC--SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCS
T ss_pred ccc--CccccchHHHHHhHHHHHHHHHHHhcccCeE-EEEEeeCcccC
Confidence 432 6778899999999999999999999999999 88999999975
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=2.6e-44 Score=291.72 Aligned_cols=190 Identities=19% Similarity=0.260 Sum_probs=174.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.+|+||++|||||++|||+++|++|+++|++ |++++|+.+ .++.+.++++..+.++.++++|++++++++++++++.
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999997 889999864 4555677777778899999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++.+ +.|+++||..+
T Consensus 81 ~~~G~iDiLVnnAG~~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g-----~~Iv~isS~~~ 148 (261)
T d1geea_ 81 KEFGKLDVMINNAGLE-------NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK-----GTVINMSSVHE 148 (261)
T ss_dssp HHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-----CEEEEECCGGG
T ss_pred HHhCCCCEeeccceec-------CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc-----ccccccccchh
Confidence 9999999999999987 46788999999999999999999999999999999888765 47999999988
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 149 ~~~---~~~~~~Y~asKaal~~lt~~lA~e~~~~gIr-VN~I~PG~v~T 193 (261)
T d1geea_ 149 KIP---WPLFVHYAASKGGMKLMTETLALEYAPKGIR-VNNIGPGAINT 193 (261)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCS
T ss_pred ccc---CccccccccCCccchhhHHHHHHHhhhhCcE-EEEEeeCcCcC
Confidence 776 7889999999999999999999999999999 78999999985
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=1.8e-44 Score=292.41 Aligned_cols=189 Identities=21% Similarity=0.284 Sum_probs=176.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++...+.++.++++|++++++++++++++.+
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 81 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999997 99999998888887777777788999999999999999999999999
Q ss_pred HcC-CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 104 KYG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++ ++|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+
T Consensus 82 ~~~~~idilvnnAG~~-------~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~isS~~~ 148 (259)
T d2ae2a_ 82 HFHGKLNILVNNAGIV-------IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG------NVVFISSVSG 148 (259)
T ss_dssp HTTTCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE------EEEEECCGGG
T ss_pred HhCCCceEEEECCcee-------ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccc------cccccccccc
Confidence 986 899999999987 46788999999999999999999999999999999998876 9999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++|+|+++.|++++||| +|+|+||.|++
T Consensus 149 ~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~I~PG~i~T 193 (259)
T d2ae2a_ 149 ALA---VPYEAVYGATKGAMDQLTRCLAFEWAKDNIR-VNGVGPGVIAT 193 (259)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEECSBCS
T ss_pred ccc---cccccchHHHHHHHHHHHHHHHHHhCcCceE-EEEeeeCcccC
Confidence 877 7889999999999999999999999999999 88999999975
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.9e-45 Score=292.28 Aligned_cols=185 Identities=26% Similarity=0.381 Sum_probs=170.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++ +.+..++.+|++++++++++++++.++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~--Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAE 75 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence 579999999999999999999999999997 899999887766655444 457889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||++||..+..
T Consensus 76 ~g~iDilVnnAg~~-------~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~II~isS~~~~~ 142 (243)
T d1q7ba_ 76 FGEVDILVNNAGIT-------RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHG------RIITIGSVVGTM 142 (243)
T ss_dssp TCSCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHH
T ss_pred cCCcceehhhhhhc-------cccccccccccccccccceeechhhhhHHHHHHHHHHcCCC------EeeeecchhhcC
Confidence 99999999999987 46788999999999999999999999999999999988765 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++.+|++||+|+++|+++++.|++++||| +|+|+||.+++
T Consensus 143 ~---~~~~~~Y~asKaal~~lt~~lA~ela~~gIr-VN~I~PG~i~T 185 (243)
T d1q7ba_ 143 G---NGGQANYAAAKAGLIGFSKSLAREVASRGIT-VNVVAPGFIET 185 (243)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred C---CCCCHHHHHHHHHHHHHHHHHHHHhCccCeE-EEEEecceEec
Confidence 7 7888999999999999999999999999999 88999999985
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.6e-44 Score=289.98 Aligned_cols=185 Identities=22% Similarity=0.323 Sum_probs=170.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++.+.++ .+.++.++++|++|+++++++++++.++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAAE---LADAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---TGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---hhCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 99999987666554443 3567899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||.. ...++.+.+.++|++.+++|+.++++++|++.|.|++++.| +||+++|..+..
T Consensus 78 ~g~idilinnAG~~-------~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~isS~~~~~ 144 (244)
T d1nffa_ 78 FGGLHVLVNNAGIL-------NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG------SIINISSIEGLA 144 (244)
T ss_dssp HSCCCEEEECCCCC-------CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred hCCCeEEEECCccc-------CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcc------eEEecccccccc
Confidence 99999999999987 46788999999999999999999999999999999988775 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|+++|+|+++|+|+++.|++++||| +|+|+||.+++
T Consensus 145 ~---~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~i~T 187 (244)
T d1nffa_ 145 G---TVACHGYTATKFAVRGLTKSTALELGPSGIR-VNSIHPGLVKT 187 (244)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCS
T ss_pred c---cccccchhhHHHHHHHHHHHHHHHhcccCEE-EEEEeeCCccC
Confidence 7 7889999999999999999999999999999 88999999985
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=2.5e-44 Score=291.24 Aligned_cols=187 Identities=19% Similarity=0.347 Sum_probs=169.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+|+||++|||||++|||+++|++|+++|++ |++++|+.+.++.+.+ +.+.++.+++||++++++++++++++.+
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~---~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 75 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGAR--VAIADINLEAARATAA---EIGPAACAIALDVTDQASIDRCVAELLD 75 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEE--EEEEESCHHHHHHHHH---HHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---HhCCceEEEEeeCCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999999997 9999998766555443 3367899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|++.|.|.+++.+ ++||+++|..+.
T Consensus 76 ~~g~iDilVnnAg~~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~-----g~Iv~isS~~~~ 143 (256)
T d1k2wa_ 76 RWGSIDILVNNAALF-------DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRG-----GKIINMASQAGR 143 (256)
T ss_dssp HHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGT
T ss_pred HhCCccEEEeecccc-------cccccccCCHHHHHhhhceeeeccccchhhccchhHHhccC-----Cccccccchhhc
Confidence 999999999999987 46788999999999999999999999999999987665432 599999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+|+++|+++++.|++++||| +|+|+||.+++
T Consensus 144 ~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~V~PG~i~T 187 (256)
T d1k2wa_ 144 RG---EALVGVYCATKAAVISLTQSAGLNLIRHGIN-VNAIAPGVVDG 187 (256)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred cc---cccccchhhhhhHHHHHHHHHHHHhcccCeE-EEEEecCCCCc
Confidence 77 7889999999999999999999999999999 88999999985
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=3e-44 Score=289.91 Aligned_cols=189 Identities=21% Similarity=0.276 Sum_probs=173.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+|+||++|||||++|||+++|++|++.|++ |++++|+++.++.+.+.+.. +.++.++++|++|+++++++++++.+
T Consensus 2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (251)
T d1zk4a1 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999997 99999998777776665543 56899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||.. +..++.+.+.++|++.+++|+.++++++|+++|+|++++.| ++||+++|..+.
T Consensus 79 ~~G~iDiLVnnAg~~-------~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~g-----g~Ii~isS~~~~ 146 (251)
T d1zk4a1 79 AFGPVSTLVNNAGIA-------VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGF 146 (251)
T ss_dssp HHSSCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-----EEEEEECCGGGT
T ss_pred HhCCceEEEeccccc-------cccchhcccccchhhhccccccccchhHHHHHHHHHhcCCC-----CceEeeecccee
Confidence 999999999999987 46788999999999999999999999999999999988765 589999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhh--ccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGV--WSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e--~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .|++..|+++|+|+.+|+++++.| ++++||| +|+|+||.|++
T Consensus 147 ~~---~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIr-VN~I~PG~i~T 192 (251)
T d1zk4a1 147 VG---DPSLGAYNASKGAVRIMSKSAALDCALKDYDVR-VNTVHPGYIKT 192 (251)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEE-EEEEEECCBCC
T ss_pred cc---CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEE-EEEEeCCCCCC
Confidence 77 788899999999999999999999 5689999 88999999975
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=2.4e-44 Score=290.57 Aligned_cols=185 Identities=22% Similarity=0.295 Sum_probs=170.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++.+. ++.+.++.++++|++++++++++++++.++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAATA---RELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH---HHhCCceEEEEcccCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 999999876555443 344678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+..
T Consensus 77 ~g~iDilVnnAg~~-------~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G------~II~isS~~~~~ 143 (254)
T d1hdca_ 77 FGSVDGLVNNAGIS-------TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG------SIVNISSAAGLM 143 (254)
T ss_dssp HSCCCEEEECCCCC-------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred cCCccEEEecCccc-------cccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCC------eecccccchhcc
Confidence 99999999999987 46788999999999999999999999999999999988775 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++.+|++||+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 144 ~---~~~~~~Y~asKaal~~lt~~lA~e~a~~gIr-VN~I~PG~v~T 186 (254)
T d1hdca_ 144 G---LALTSSYGASKWGVRGLSKLAAVELGTDRIR-VNSVHPGMTYT 186 (254)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred c---ccchhhHHHHHHHHHHHHHHHHHHhCCCceE-EEEeeeCcccC
Confidence 7 7889999999999999999999999999999 88999999985
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.3e-44 Score=290.72 Aligned_cols=185 Identities=24% Similarity=0.282 Sum_probs=171.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
||++|||||++|||+++|++|+++|++ |++++|+++.++++.++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999997 999999988888877777777889999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhh--hcCCCCcccCceEEEEeccCccccC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL--KVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l--~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
||+||||||+. ...++.+.+.++|++.+++|+.++++++|+++|+| .+++.| +||+++|..+..+
T Consensus 80 iDilVnnAG~~-------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g------~Ii~i~S~~~~~~ 146 (257)
T d2rhca1 80 VDVLVNNAGRP-------GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG------RIVNIASTGGKQG 146 (257)
T ss_dssp CSEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEE------EEEEECCGGGTSC
T ss_pred CCEEEeccccc-------CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCc------ccccccccccccc
Confidence 99999999987 46788999999999999999999999999999974 455544 9999999998877
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++.+|+++|+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 147 ---~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~i~T 188 (257)
T d2rhca1 147 ---VVHAAPYSASKHGVVGFTKALGLELARTGIT-VNAVCPGFVET 188 (257)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEE-EEEEEECSBCS
T ss_pred ---cccchhHHHHHHHHHHHHHHHHHHhhhhCcE-EEEEeeCCCCC
Confidence 7889999999999999999999999999999 88999999975
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.7e-44 Score=290.58 Aligned_cols=189 Identities=20% Similarity=0.244 Sum_probs=162.4
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+.+...+.++.++.||++++++++++++++.+
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999997 99999999888887777766677999999999999999999999999
Q ss_pred Hc-CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 104 KY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++ |++|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+
T Consensus 82 ~~~g~idilvnnAG~~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Iv~isS~~~ 148 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAI-------RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG------NIIFMSSIAG 148 (259)
T ss_dssp HHTTCCSEEEEECCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------EEEEEC----
T ss_pred HhCCCccccccccccc-------CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccc------cccccccccc
Confidence 98 7899999999987 46778899999999999999999999999999999988876 9999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .++...|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 149 ~~~---~~~~~~Y~asKaal~~lt~~lA~e~~~~gIr-VN~V~PG~i~T 193 (259)
T d1xq1a_ 149 VVS---ASVGSIYSATKGALNQLARNLACEWASDGIR-ANAVAPAVIAT 193 (259)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEECCSCC-
T ss_pred ccc---ccccccccccccchhhhhHHHHHHhcccCeE-EEEeccCcccC
Confidence 877 6888899999999999999999999999999 88999999975
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=6.2e-44 Score=288.78 Aligned_cols=185 Identities=20% Similarity=0.286 Sum_probs=172.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||++|||+++|++|+++|++ |++++|+++.++.+.++++..+.++.+++||++++++++++++++.++||+|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 79 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence 78999999999999999999999997 9999999988888877777778899999999999999999999999999999
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|+||||||+. +..++.+.+.++|++.+++|+.++++++|+++|+|.+++.+ ++|++++|..+..+
T Consensus 80 DilVnnAG~~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~-----g~Iv~isS~~~~~~--- 144 (255)
T d1gega_ 80 DVIVNNAGVA-------PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG-----GKIINACSQAGHVG--- 144 (255)
T ss_dssp CEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGTSC---
T ss_pred cEEEeccccc-------ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc-----cccccccchhhccc---
Confidence 9999999987 46789999999999999999999999999999988776654 58999999988777
Q ss_pred CCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 189 LGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~i~T 186 (255)
T d1gega_ 145 NPELAVYSSSKFAVRGLTQTAARDLAPLGIT-VNGYCPGIVKT 186 (255)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBSS
T ss_pred CcccccchhCHHHHHhhHHHHHHHhhhhCcE-EEEEecCcccC
Confidence 7889999999999999999999999999999 88999999975
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=4.9e-44 Score=290.20 Aligned_cols=187 Identities=16% Similarity=0.197 Sum_probs=170.3
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhh-hcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+||++|||||++|||+++|++|+++|++ |++++|++ +.++.+.+.+ +..+.++.++++|++|+++++++++++.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999999997 99999875 4445554443 44567999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+.
T Consensus 80 ~~G~iDiLVnnAG~~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Iv~isS~~~~ 146 (260)
T d1x1ta1 80 QMGRIDILVNNAGIQ-------HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGL 146 (260)
T ss_dssp HHSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred HhCCCcEEEeecccc-------cCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCc------eEeecccccce
Confidence 999999999999987 46788999999999999999999999999999999998876 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++.+|++||+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 147 ~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~I~PG~i~T 190 (260)
T d1x1ta1 147 VA---SANKSAYVAAKHGVVGFTKVTALETAGQGIT-ANAICPGWVRT 190 (260)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCBCC
T ss_pred ec---cCCcchhhhhhhhHHHhHHHHHHHhchhCcE-EEEEecCCCCC
Confidence 77 7889999999999999999999999999999 88999999975
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.5e-43 Score=285.11 Aligned_cols=182 Identities=20% Similarity=0.194 Sum_probs=165.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.|+||++|||||++|||+++|++|+++|++ |++++|+++..+.. +.. ...+++||++++++++++++++.++
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~-~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~ 73 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEGKEVA-EAI-----GGAFFQVDLEDERERVRFVEEAAYA 73 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTHHHHH-HHH-----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH-HHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999997 99999987654322 211 3457899999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+..
T Consensus 74 ~G~iDiLVnnAG~~-------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~Ii~isS~~~~~ 140 (248)
T d2d1ya1 74 LGRVDVLVNNAAIA-------APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG------AIVNVASVQGLF 140 (248)
T ss_dssp HSCCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCGGGTS
T ss_pred cCCCCeEEEeCcCC-------CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccc------cccccccccccc
Confidence 99999999999987 46788999999999999999999999999999999998875 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++...|+++|+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 141 ~---~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~v~T 183 (248)
T d2d1ya1 141 A---EQENAAYNASKGGLVNLTRSLALDLAPLRIR-VNAVAPGAIAT 183 (248)
T ss_dssp B---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred c---ccccchhHHHHHHHHHHHHHHHHHhhhhCcE-EEEEeeCCCCC
Confidence 7 7889999999999999999999999999999 88999999985
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-44 Score=287.01 Aligned_cols=184 Identities=21% Similarity=0.321 Sum_probs=166.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|+.|+++|++ |++++|+++.++.+.++ ..++.++.||++|+++++++++++.++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~----~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQE----LPGAVFILCDVTQEDDVKTLVSETIRR 76 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH----CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHh----cCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence 689999999999999999999999999997 99999987666655443 246789999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||+||||||... ...++++.+.++|++.+++|+.++++++|+++|+|++++ | +||+++|..+..
T Consensus 77 ~g~iDilVnnAG~~~------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~Ii~isS~~~~~ 143 (250)
T d1ydea1 77 FGRLDCVVNNAGHHP------PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-G------NVINISSLVGAI 143 (250)
T ss_dssp HSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCHHHHH
T ss_pred cCCCCEEEecccccc------cccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-C------CCcccccccccc
Confidence 999999999999764 456678999999999999999999999999999998654 4 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++.+|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 144 ~---~~~~~~Y~asKaal~~lt~~lA~e~a~~gIr-VN~I~PG~i~T 186 (250)
T d1ydea1 144 G---QAQAVPYVATKGAVTAMTKALALDESPYGVR-VNCISPGNIWT 186 (250)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECSBCC
T ss_pred c---ccCcchhHHHHhhHHHHHHHHHHHhcccCeE-EEEEeeCCCCC
Confidence 7 7888999999999999999999999999999 88999999985
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=1.1e-43 Score=284.73 Aligned_cols=186 Identities=15% Similarity=0.167 Sum_probs=173.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCc-----cEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~-----~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|||||++|||+++|++|+++|++ ..|++++|+++.++.+.++++..+.++.+++||++|+++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999995 1388899999888888777777788999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+++|..+.
T Consensus 82 ~~g~iDilvnnAg~~-------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Ii~isS~~~~ 148 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVG-------RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG------HIFFITSVAAT 148 (240)
T ss_dssp HTSCCSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred HcCCcceeecccccc-------cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCC------ceEEEechhhc
Confidence 999999999999987 46789999999999999999999999999999999988775 99999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .|++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 149 ~~---~~~~~~Y~asK~al~~lt~~la~el~~~gIr-vn~i~PG~v~T 192 (240)
T d2bd0a1 149 KA---FRHSSIYCMSKFGQRGLVETMRLYARKCNVR-ITDVQPGAVYT 192 (240)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCBCS
T ss_pred CC---CCCChHHHHHHHHHHHHHHHHHHHhCcCCeE-EEEeeeCcccC
Confidence 77 7889999999999999999999999999999 78999999985
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=1e-43 Score=285.62 Aligned_cols=184 Identities=23% Similarity=0.299 Sum_probs=169.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEe-ecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++|||||++|||+++|++|+++|++ |++. .|+++.++.+.++++..+.++.++++|++|+++++++++++.+++|+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~--V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCK--VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999997 7665 45666667777777777889999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||++||..+..+
T Consensus 80 iDiLVnnAg~~-------~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~IVnisS~~~~~~-- 144 (244)
T d1edoa_ 80 IDVVVNNAGIT-------RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG------RIINIASVVGLIG-- 144 (244)
T ss_dssp CSEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC--
T ss_pred CCccccccccc-------cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc------EEEEEcChhhcCC--
Confidence 99999999987 46789999999999999999999999999999999988765 9999999998887
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 145 -~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-vN~I~PG~i~T 186 (244)
T d1edoa_ 145 -NIGQANYAAAKAGVIGFSKTAAREGASRNIN-VNVVCPGFIAS 186 (244)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEE-EEEEEECSBCS
T ss_pred -CCCCHHHHHHHHHHHHChHHHHHHHhhhCcE-EEEEecceecc
Confidence 7888999999999999999999999999999 78999999985
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.3e-43 Score=280.66 Aligned_cols=177 Identities=22% Similarity=0.311 Sum_probs=157.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|++.|++ |++++|+++.. .++..+++|++|+++++++++++.++
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 579999999999999999999999999997 99999987553 35678999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|+||+||||||+. ...++.+.+.++|++++++|+.++++++|+++|+|++++.| +||+++|..+..
T Consensus 71 ~g~iDiLVnnAG~~-------~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~Iv~isS~~~~~ 137 (237)
T d1uzma1 71 QGPVEVLVSNAGLS-------ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG------RMIFIGSVSGLW 137 (237)
T ss_dssp HSSCSEEEEECSCC-------C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCCC--
T ss_pred cCCceEEEeeeccc-------ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCC------ceEEEcchhhcc
Confidence 99999999999987 46788999999999999999999999999999999998876 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++..+|++||+|+++|+++++.|++++||| +|+|+||.+++
T Consensus 138 ~---~~~~~~Y~asKaal~~lt~~lA~e~~~~gIr-VN~I~PG~v~T 180 (237)
T d1uzma1 138 G---IGNQANYAASKAGVIGMARSIARELSKANVT-ANVVAPGYIDT 180 (237)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred C---CcccHHHHHHHHHHHHHHHHHHhhhhcCCce-eeeeeeCcCCC
Confidence 7 7888999999999999999999999999999 78999999985
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.9e-43 Score=281.24 Aligned_cols=183 Identities=18% Similarity=0.201 Sum_probs=163.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+. .+..+++||++|+++++++++++.+
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~--V~~~~r~~~~l~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~ 73 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEA-----VGAHPVVMDVADPASVERGFAEALA 73 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHT-----TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH-----cCCeEEEEecCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999999997 99999987665554432 2467899999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||+. ...++.+.+.++|++.+++|+.+++++.|+++|.|.+++.+ .++++||. +.
T Consensus 74 ~~g~iDilVnnAG~~-------~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~------~i~~~ss~-~~ 139 (242)
T d1ulsa_ 74 HLGRLDGVVHYAGIT-------RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG------SIVLTASR-VY 139 (242)
T ss_dssp HHSSCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE------EEEEECCG-GG
T ss_pred hcCCceEEEECCccc-------ccCchhhCcchhhhccccccchhhhhhhhhccccccccccc------eeeeeccc-cc
Confidence 999999999999987 46788999999999999999999999999999999988764 77777764 44
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++.+|+++|+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 140 ~~---~~~~~~Y~asKaal~~ltk~lA~ela~~gIr-VN~I~PG~v~T 183 (242)
T d1ulsa_ 140 LG---NLGQANYAASMAGVVGLTRTLALELGRWGIR-VNTLAPGFIET 183 (242)
T ss_dssp GC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cC---CCCCcchHHHHHHHHHHHHHHHHHHhhhCcE-EEEEeeCcccC
Confidence 45 6888999999999999999999999999999 88999999985
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-43 Score=284.46 Aligned_cols=188 Identities=18% Similarity=0.266 Sum_probs=174.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++++|+.++++++.+++...+.++.++.||++|+++++++++++.++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~--V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 999999999888888777777889999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||... ...+.+.+.+.|++++++|+.++++++++++|.|.+++.| +||+++|..+..
T Consensus 82 ~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G------~Iv~isS~~~~~ 148 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVY-------TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG------HIVTVASAAGHV 148 (244)
T ss_dssp TCCCSEEEECCCCCC-------CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCC-CC
T ss_pred cCCCceeEeeccccc-------cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCc------eEEEeecchhcC
Confidence 999999999999874 5677889999999999999999999999999999998876 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccc---cCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSK---EGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~---~gi~~~~~v~pg~~~~ 231 (231)
+ .|+++.|++||+|+.+|+++|+.|+++ +||+ +|+|+||.|++
T Consensus 149 ~---~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~-V~~i~PG~v~T 194 (244)
T d1yb1a_ 149 S---VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVK-TTCLCPNFVNT 194 (244)
T ss_dssp C---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE-EEEEEETHHHH
T ss_pred C---CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEE-EEEEEcCCCCC
Confidence 7 788999999999999999999999987 5899 77999998763
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=1.5e-42 Score=281.45 Aligned_cols=196 Identities=17% Similarity=0.269 Sum_probs=171.7
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh-hhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~-~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.++++|+||++|||||++|||+++|++|+++|++ |++++|+.+.++++.+ +.+..+.++.+++||++++++++++++
T Consensus 2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~ 79 (260)
T d1h5qa_ 2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 79 (260)
T ss_dssp CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence 4567899999999999999999999999999997 9999999988777544 445567899999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.++++++|++.|+|.+++.+ +.+++++|
T Consensus 80 ~~~~~~g~iDilVnnAg~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~-----g~i~~~~s 147 (260)
T d1h5qa_ 80 QIDADLGPISGLIANAGVS-------VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-----GSIVVTSS 147 (260)
T ss_dssp HHHHHSCSEEEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECC
T ss_pred HHHHHhCCCcEeccccccc-------ccCCHHHhccccccccccccccchhhhhhhhcccccccccc-----eEEEEeec
Confidence 9999999999999999987 46788999999999999999999999999999998655443 47888777
Q ss_pred CccccCC----CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGD----NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~----~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
....... .+.++...|+++|+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-vN~I~PG~i~T 202 (260)
T d1h5qa_ 148 MSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR-VNALSPGYVNT 202 (260)
T ss_dssp GGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred cccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeE-EeecCCCcccC
Confidence 6554321 124567889999999999999999999999999 78999999985
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=8e-43 Score=281.75 Aligned_cols=184 Identities=22% Similarity=0.289 Sum_probs=167.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++ +.+..++++|++++++++++++++.++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 999999876666554443 678899999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++ ++||+++|..+..
T Consensus 78 ~g~iDilVnnAG~~-------~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------G~Iv~isS~~~~~ 143 (253)
T d1hxha_ 78 LGTLNVLVNNAGIL-------LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-------GSIINMASVSSWL 143 (253)
T ss_dssp HCSCCEEEECCCCC-------CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-------EEEEEECCGGGTS
T ss_pred hCCCCeEEeccccc-------CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-------Cceecccchhhhc
Confidence 99999999999987 356788999999999999999999999999999997644 4999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccC--CceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEG--SSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~g--i~~~~~v~pg~~~~ 231 (231)
+ .+++.+|+++|+|+.+|+++++.|++++| || +|+|+||.|++
T Consensus 144 ~---~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~Ir-VN~I~PG~i~T 188 (253)
T d1hxha_ 144 P---IEQYAGYSASKAAVSALTRAAALSCRKQGYAIR-VNSIHPDGIYT 188 (253)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEE-EEEEEESEECC
T ss_pred C---ccccccccchhHHHHHHHHHHHHHHhhcCCCEE-EEEEeECCCcC
Confidence 7 78889999999999999999999999865 99 88999999875
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=4.4e-42 Score=279.80 Aligned_cols=189 Identities=17% Similarity=0.253 Sum_probs=168.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++.. ..++.+++||++++++++++++++.++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999997 99999998887776666544 446888999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||.... ....+.+.+.++|++.+++|+.++++++|+++|+|.+++.| ++|+++|..+..
T Consensus 80 ~g~iD~lVnnAG~~~~-----~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g------~ii~iss~~~~~ 148 (268)
T d2bgka1 80 HGKLDIMFGNVGVLST-----TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG------SIVFTASISSFT 148 (268)
T ss_dssp HSCCCEEEECCCCCCS-----SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE------EEEEECCGGGTC
T ss_pred cCCcceeccccccccC-----CCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCC------Cccccccccccc
Confidence 9999999999997631 12357788999999999999999999999999999988775 999999998877
Q ss_pred CCCCCCC-ccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGG-WHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .++ ...|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 149 ~---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~I~PG~i~T 192 (268)
T d2bgka1 149 A---GEGVSHVYTATKHAVLGLTTSLCTELGEYGIR-VNCVSPYIVAS 192 (268)
T ss_dssp C---CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCCSC
T ss_pred c---ccccccccchhHHHHHhCHHHHHHHhChhCeE-EEecCCCCccC
Confidence 6 344 3479999999999999999999999999 88999999975
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=3.6e-42 Score=281.05 Aligned_cols=190 Identities=19% Similarity=0.236 Sum_probs=168.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC---CceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++.+.+++...+ .++.++++|++++++++++++++
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 78 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence 479999999999999999999999999997 9999999888887766655433 37899999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.++||+||++|||||...+ ......+.+.++|++.+++|+.+++.++|+++|+|.+++.| .|+++||..
T Consensus 79 ~~~~G~iDilVnnAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~ii~~ss~~ 147 (274)
T d1xhla_ 79 LAKFGKIDILVNNAGANLA-----DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGE------IVNVSSIVA 147 (274)
T ss_dssp HHHHSCCCEEEECCCCCCC-----CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEECCGGG
T ss_pred HHHcCCceEEEeecccccc-----cccccccCCHHHHHHHHhhcccccccccccccccccccccc------cccchhhhh
Confidence 9999999999999997531 23345667889999999999999999999999999887764 888888887
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 148 ~~~~---~~~~~~Y~asKaal~~ltk~lA~ela~~gIr-VN~I~PG~i~T 193 (274)
T d1xhla_ 148 GPQA---HSGYPYYACAKAALDQYTRCTAIDLIQHGVR-VNSVSPGAVAT 193 (274)
T ss_dssp SSSC---CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCS
T ss_pred cccc---CCCCceehhhhhHHHHHHHHHHHHHhHhCCc-eeeeccCCCcC
Confidence 7766 6888999999999999999999999999999 88999999975
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.5e-42 Score=280.64 Aligned_cols=191 Identities=18% Similarity=0.190 Sum_probs=159.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC---CceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++...+ .++.++++|++++++++++++++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 589999999999999999999999999997 9999999888888766654432 36999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|+||++|||||...+.+ ....+.+.+.++|++.+++|+.++++++|+++|+|++++. .+|+++|..
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~---~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-------~iI~~~S~~ 149 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDS---QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-------EIVNISSIA 149 (264)
T ss_dssp HHHHSCCCEEEECCC----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------EEEEECCTT
T ss_pred HHHhCCCCEeecccccccCCc---cccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-------cceeeeeec
Confidence 999999999999999763111 2334566788999999999999999999999999987652 677776665
Q ss_pred c-ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 G-SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~-~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ ..+ .+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 150 ~~~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-VN~V~PG~v~T 196 (264)
T d1spxa_ 150 SGLHA---TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR-VNSISPGLVAT 196 (264)
T ss_dssp SSSSC---CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBCC
T ss_pred ccccc---CCCchhhhhhhhhHHHHHHHHHHHhcccCeE-EEEEeeCCCCC
Confidence 4 445 7888999999999999999999999999999 88999999975
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=3.9e-42 Score=278.43 Aligned_cols=189 Identities=23% Similarity=0.300 Sum_probs=176.3
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++...+..+.++.||++++++++++++++.+
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~~--V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~ 79 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 79 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH
Confidence 4679999999999999999999999999997 99999999888888778787788999999999999999999999999
Q ss_pred Hc-CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 104 KY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 104 ~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++ +++|+||||||.. ...++.+.+.++|++++++|+.+++++.+++.|.|.+++.| +||+++|..+
T Consensus 80 ~~~g~idilinnag~~-------~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g------~ii~isS~~~ 146 (258)
T d1ae1a_ 80 VFDGKLNILVNNAGVV-------IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIAG 146 (258)
T ss_dssp HTTSCCCEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE------EEEEECCGGG
T ss_pred HhCCCcEEEecccccc-------ccCccccCCHHHHhhhhhhcccccccccccccccccccccc------cccccccccc
Confidence 98 6899999999987 46788999999999999999999999999999999998876 9999999998
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+++..|+++|+|+++|++.+++|++++||| +|+|+||.|++
T Consensus 147 ~~~---~~~~~~Y~~sK~al~~lt~~lA~el~~~gIr-vN~I~PG~i~T 191 (258)
T d1ae1a_ 147 FSA---LPSVSLYSASKGAINQMTKSLACEWAKDNIR-VNSVAPGVILT 191 (258)
T ss_dssp TSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBC-
T ss_pred ccc---cccchhHHHHHHHHHHHHHHHHHhcCcCcEE-EEEEeeCcccC
Confidence 877 7889999999999999999999999999999 88999999975
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=3.7e-42 Score=280.77 Aligned_cols=191 Identities=19% Similarity=0.210 Sum_probs=165.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC---CceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.+++.+.+ .++.+++||++++++++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~--V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 79 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 79 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence 589999999999999999999999999997 9999999888888766655432 47999999999999999999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc-C
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA-R 180 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss-~ 180 (231)
.+++|+||++|||||...+.+ ......+.+.++|++.+++|+.+++.++|+++|+|++++. .+|+++| .
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~---~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-------~iI~~~Ss~ 149 (272)
T d1xkqa_ 80 LKQFGKIDVLVNNAGAAIPDA---FGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG-------EIVNVSSIV 149 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCT---TCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------EEEEECCGG
T ss_pred HHHhCCceEEEeCCcccCccc---ccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC-------ccccccchh
Confidence 999999999999999874221 1233456778899999999999999999999999987653 5555555 4
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 150 a~~~~---~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~i~T 196 (272)
T d1xkqa_ 150 AGPQA---QPDFLYYAIAKAALDQYTRSTAIDLAKFGIR-VNSVSPGMVET 196 (272)
T ss_dssp GSSSC---CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCBCS
T ss_pred ccccC---CCCcchhhhHHHHHHHHHHHHHHHhcccCeE-EEEEeeCCCcc
Confidence 55555 7888999999999999999999999999999 88999999975
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-41 Score=273.51 Aligned_cols=183 Identities=20% Similarity=0.220 Sum_probs=161.4
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
|++.|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.++. ..+.++.+|++|++++++++
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~--V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~--- 71 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERAL--- 71 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH---
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH---
Confidence 456789999999999999999999999999997 999999877666554433 35788999999999987665
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhc-CCCCcccCceEEEEeccC
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSAR 180 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~~~~~~~~~iv~iss~ 180 (231)
+++|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|.|.+ ++. ++||+++|.
T Consensus 72 -~~~g~iDilVnnAg~~-------~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~------g~Ii~isS~ 137 (244)
T d1pr9a_ 72 -GSVGPVDLLVNNAAVA-------LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP------GAIVNVSSQ 137 (244)
T ss_dssp -TTCCCCCEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEEECCG
T ss_pred -HHhCCceEEEeccccc-------cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc------ceEeecccc
Confidence 4579999999999987 4678999999999999999999999999999997654 344 499999999
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+..+ .+++..|++||+|+++|+++++.|++++||| +|+|+||.|++
T Consensus 138 ~~~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-vN~I~PG~v~T 184 (244)
T d1pr9a_ 138 CSQRA---VTNHSVYCSTKGALDMLTKVMALELGPHKIR-VNAVNPTVVMT 184 (244)
T ss_dssp GGTSC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCS
T ss_pred ccccc---ccchhhhhhhHHHHHHHHHHHHHHhCCCcEE-EEEEeeCcCcC
Confidence 98877 7888999999999999999999999999999 88999999985
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-41 Score=272.71 Aligned_cols=182 Identities=20% Similarity=0.240 Sum_probs=160.0
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.++. ..+.++.+|++|++++++++ +
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~ 70 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----G 70 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----T
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----H
Confidence 4789999999999999999999999999997 999999876655544432 35788999999999887665 4
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|++.|.|.+++.+ ++||+++|..+.
T Consensus 71 ~~g~iDilVnnAg~~-------~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~-----g~ii~isS~~~~ 138 (242)
T d1cyda_ 71 GIGPVDLLVNNAALV-------IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP-----GSIVNVSSMVAH 138 (242)
T ss_dssp TCCCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGGT
T ss_pred HcCCCeEEEECCccc-------cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhccc-----Ccccccchhhcc
Confidence 679999999999986 46789999999999999999999999999999986654332 499999999887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .|++..|+++|+|+.+|+|+++.|++++||| +|+|+||.+++
T Consensus 139 ~~---~~~~~~Y~asKaal~~lt~~lA~e~~~~gIr-vN~I~PG~i~T 182 (242)
T d1cyda_ 139 VT---FPNLITYSSTKGAMTMLTKAMAMELGPHKIR-VNSVNPTVVLT 182 (242)
T ss_dssp SC---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBTT
T ss_pred cc---CCccccccchHHHHHHHHHHHHHHhCccCee-cccCCCCCccC
Confidence 76 7889999999999999999999999999999 88999999975
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.6e-42 Score=282.07 Aligned_cols=190 Identities=17% Similarity=0.206 Sum_probs=167.6
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc------chhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT------GLLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~------~~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
+|+|+||++|||||++|||+++|++|+++|++ |++.+++.+... .+.+..+..+.......+|+++.+++++
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~--Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK 79 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHH
Confidence 47899999999999999999999999999997 888887654321 1222223333455677899999999999
Q ss_pred HHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEE
Q 026924 97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~ 176 (231)
+++++.+++|+||+||||||+. ...++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||+
T Consensus 80 ~v~~~~~~~G~iDiLVnNAGi~-------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IV~ 146 (302)
T d1gz6a_ 80 LVKTALDTFGRIDVVVNNAGIL-------RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG------RIIM 146 (302)
T ss_dssp HHHHHHHHTSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEE
T ss_pred HHHHHHHHcCCCCEEEECCccC-------CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc------EEEE
Confidence 9999999999999999999987 46789999999999999999999999999999999988875 9999
Q ss_pred eccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 177 LSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 177 iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+||..+..+ .+++..|++||+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 147 isS~~~~~~---~~~~~~Y~asKaal~~lt~~la~E~~~~gIr-VN~I~PG~~~t 197 (302)
T d1gz6a_ 147 TASASGIYG---NFGQANYSAAKLGLLGLANTLVIEGRKNNIH-CNTIAPNAGSR 197 (302)
T ss_dssp ECCHHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEEECCST
T ss_pred eCChhhcCC---CCCcHHHHHHHHHHHHHHHHHHHHHhccCCc-eeeeCCCCCCc
Confidence 999998887 7889999999999999999999999999999 88999998863
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-41 Score=271.33 Aligned_cols=192 Identities=20% Similarity=0.216 Sum_probs=169.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+++.++.+.++++..+ .++.+++||++++++++++++++.
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 489999999999999999999999999997 8999999888888766655443 489999999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+++|+||+||||||.. ...++.+.+.++|++.+++|+.+++++.+++.|.|++++.. .++||+++|..+
T Consensus 85 ~~~g~iD~lVnnAg~~-------~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~----~g~Ii~isS~~~ 153 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLA-------RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD----DGHIININSMSG 153 (257)
T ss_dssp HHHCCCSEEEECCCCC-------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC----SCEEEEECCGGG
T ss_pred HhcCCCCEEEeccccc-------CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC----CCceEEEechHh
Confidence 9999999999999987 46788999999999999999999999999999999876521 149999999987
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhc--cccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVW--SKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~--~~~gi~~~~~v~pg~~~~ 231 (231)
.... |.++...|+++|+|+.+|+++++.|+ +++||+ +|+|+||.+++
T Consensus 154 ~~~~-p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~-vn~i~PG~i~t 202 (257)
T d1xg5a_ 154 HRVL-PLSVTHFYSATKYAVTALTEGLRQELREAQTHIR-ATCISPGVVET 202 (257)
T ss_dssp TSCC-SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEEEESCBCS
T ss_pred cCCC-CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEE-EEEEeCCCCCC
Confidence 6441 24566779999999999999999998 789999 78999999874
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=3.5e-41 Score=275.47 Aligned_cols=189 Identities=18% Similarity=0.193 Sum_probs=162.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|+|+||++|||||++|||+++|++|+++|++ |++++|+++.++++. ++.+.++..+.+|++++++++++++++.+
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAK--VAVLDKSAERLAELE---TDHGDNVLGIVGDVRSLEDQKQAASRCVA 75 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH---HHcCCCeeEEecccccHHHHHHHHHHHHH
Confidence 5689999999999999999999999999997 999999876555443 33467899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|++|++|||||+..+... ......+.+.+.|++.+++|+.++++++|+++|.|++++ | ++|+++|..+.
T Consensus 76 ~~g~idilvnnAG~~~~~~~--~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g------~iI~i~S~~~~ 146 (276)
T d1bdba_ 76 RFGKIDTLIPNAGIWDYSTA--LVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-G------NVIFTISNAGF 146 (276)
T ss_dssp HHSCCCEEECCCCCCCTTCC--GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGT
T ss_pred HhCCcccccccccccCCCCc--cccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-C------Cceeeeechhc
Confidence 99999999999998642211 122334455667999999999999999999999998765 3 89999998887
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++..|+++|+|+.+|+|+++.|++++ || +|+|+||.|++
T Consensus 147 ~~---~~~~~~Y~asKaal~~ltr~lA~ela~~-Ir-VN~I~PG~i~T 189 (276)
T d1bdba_ 147 YP---NGGGPLYTAAKHAIVGLVRELAFELAPY-VR-VNGVGSGGINS 189 (276)
T ss_dssp ST---TSSCHHHHHHHHHHHHHHHHHHHHHTTT-CE-EEEEEECCCCS
T ss_pred cC---CCCCchHHHHHHHHHHHHHHHHHHhhcc-eE-EcccCCCCEec
Confidence 76 7888999999999999999999999985 99 88999999975
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=4.8e-41 Score=272.34 Aligned_cols=187 Identities=19% Similarity=0.230 Sum_probs=167.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEee-cCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+|+||++|||||++|||+++|+.|+++|++ |++.+ ++++..+.+.++++..+.++.+++||++|+++++++++++.+
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~--Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGAS--VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999999999997 66654 555556667777778888999999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|++++ .+++++|..+.
T Consensus 81 ~~g~idilinnag~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g--------~~iii~s~~~~ 145 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGME-------VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG--------RIILTSSIAAV 145 (259)
T ss_dssp HHSCEEEEECCCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE--------EEEEECCGGGT
T ss_pred HcCCCcEEEeccccc-------cccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC--------ccccccccccc
Confidence 999999999999987 467889999999999999999999999999999997653 77777776665
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.. +.+++..|+++|+|+.+|+|+++.|++++||| +|+|+||.+|+
T Consensus 146 ~~--~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIr-vN~I~PG~i~T 190 (259)
T d1ja9a_ 146 MT--GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT-VNCIAPGGVKT 190 (259)
T ss_dssp CC--SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBSS
T ss_pred cc--CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeE-EeccCcCCccC
Confidence 43 26888999999999999999999999999999 78999999985
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-41 Score=275.93 Aligned_cols=188 Identities=20% Similarity=0.237 Sum_probs=167.9
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-----cCCCceeEEEecCCChHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-----RFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-----~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
-.|+||++|||||++|||+++|++|+++|++ |++++|+.+.++.+.+++. ..+.++.+++||+++++++++++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga~--Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~ 85 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 85 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence 4689999999999999999999999999997 9999999887777554432 23568999999999999999999
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+++.+++|+||+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|.|.+++.+ .||++|
T Consensus 86 ~~~~~~~G~iDiLVnnAg~~-------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g------~Ii~~s 152 (297)
T d1yxma1 86 KSTLDTFGKINFLVNNGGGQ-------FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG------SIVNII 152 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE------EEEEEC
T ss_pred HHHHHHhCCeEEEEeecccc-------ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccc------cccccc
Confidence 99999999999999999986 46788999999999999999999999999999999988765 888886
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+. +..+ .++...|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 153 s~-~~~~---~~~~~~Y~asKaal~~ltk~lA~el~~~gIr-VN~I~PG~i~T 200 (297)
T d1yxma1 153 VP-TKAG---FPLAVHSGAARAGVYNLTKSLALEWACSGIR-INCVAPGVIYS 200 (297)
T ss_dssp CC-CTTC---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEE-EEEEEECSBCC
T ss_pred cc-cccc---ccccccchhHHHHHHHHHHHHHHHhcccCce-EEEeeeCcCcC
Confidence 63 3334 6788899999999999999999999999999 88999999974
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=1.8e-40 Score=268.00 Aligned_cols=184 Identities=21% Similarity=0.254 Sum_probs=161.2
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-CCceeEEEecCC-ChHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLT-VESTIEASAKSI 101 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dls-~~~~v~~~~~~~ 101 (231)
|+|+||++|||||++|||+++|++|+++|++ |++++|+.+..+.+.++.... +.++.++.+|++ +.++++++++++
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~--vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999998 777778777666665554443 448999999998 667899999999
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++|+||+||||||.. +.+.|++++++|+.++++++++++|.|.+++.+ ..++||+++|..
T Consensus 79 ~~~~g~iDilvnnAG~~---------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~---~~g~Ii~isS~~ 140 (254)
T d1sbya1 79 FDQLKTVDILINGAGIL---------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG---PGGIIANICSVT 140 (254)
T ss_dssp HHHHSCCCEEEECCCCC---------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGG
T ss_pred HHHcCCCCEEEeCCCCC---------------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccC---CCceEEEEechh
Confidence 99999999999999954 246789999999999999999999999876432 236999999999
Q ss_pred cccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 182 GSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 182 ~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+ .+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 141 ~~~~---~~~~~~Y~asKaal~~~t~~la~el~~~gIr-Vn~I~PG~v~T 186 (254)
T d1sbya1 141 GFNA---IHQVPVYSASKAAVVSFTNSLAKLAPITGVT-AYSINPGITRT 186 (254)
T ss_dssp GTSC---CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEE-EEEEEECSEES
T ss_pred hccC---CCCCHHHHHHHHHHHHHHHHHHhhccccCeE-EEEEEeCCCcC
Confidence 8877 7889999999999999999999999999999 77999999875
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-40 Score=269.21 Aligned_cols=182 Identities=21% Similarity=0.298 Sum_probs=160.8
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-C-CCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++||++|||||++|||+++|++|+++|++ |++++|+.+.++++.+.+.. . +.++.+++||++++++++++++++.+
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 78 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 47999999999999999999999999997 99999998887776554432 2 45899999999999999999999999
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
++|+||+||||||... .++|++.+++|+.+++.+.+.++|+|.+++.+ ..++||++||..+.
T Consensus 79 ~~G~iDilVnnAg~~~---------------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~---~~g~Iv~isS~~~~ 140 (254)
T d2gdza1 79 HFGRLDILVNNAGVNN---------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG---EGGIIINMSSLAGL 140 (254)
T ss_dssp HHSCCCEEEECCCCCC---------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGGT
T ss_pred HcCCcCeecccccccc---------------cccchheeeeehhhHHHHHHHHHHHHHHhhcC---CCcEEEeeccHhhc
Confidence 9999999999999752 23588999999999999999999999876532 22699999999988
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHH--hhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKIC--VSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~--l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .+++.+|++||+|+.+|+|+ ++.|++++||| +|+|+||.|++
T Consensus 141 ~~---~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIr-VN~I~PG~i~T 186 (254)
T d2gdza1 141 MP---VAQQPVYCASKHGIVGFTRSAALAANLMNSGVR-LNAICPGFVNT 186 (254)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEE-EEEEEESCBSS
T ss_pred cC---CCCccchHHHHHHHHHHHHHHHHHHHhcCCCEE-EEEEEcCCCCC
Confidence 77 78889999999999999997 68899999999 78999999975
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=4.1e-40 Score=268.65 Aligned_cols=191 Identities=21% Similarity=0.301 Sum_probs=170.1
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC-CCccchhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+.+.+|+||++|||||++|||+++|++|+++|++ |++++++. +.++.+.+++++.+.++.++.+|++++++++++++
T Consensus 11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~--Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~ 88 (272)
T d1g0oa_ 11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE 88 (272)
T ss_dssp GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence 3455789999999999999999999999999997 88887764 44555666777778899999999999999999999
Q ss_pred HHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
++.+.+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.|++.|+|.+++ ++++++|
T Consensus 89 ~~~~~~g~idilV~nag~~-------~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g--------~~i~i~s 153 (272)
T d1g0oa_ 89 EAVKIFGKLDIVCSNSGVV-------SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG--------RLILMGS 153 (272)
T ss_dssp HHHHHHSCCCEEEECCCCC-------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC--------EEEEECC
T ss_pred HHHHHhCCCCccccccccc-------hhhhhhhhhhhHHHHHhhhccceeeeecccccccccccc--------ccccccc
Confidence 9999999999999999987 467889999999999999999999999999999998764 8888888
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+.... .+++..|+++|+|+++|+|+++.|++++||| +|+|+||.+++
T Consensus 154 ~~~~~~~--~~~~~~Y~asKaal~~ltk~lA~e~~~~gIr-VN~I~PG~v~T 202 (272)
T d1g0oa_ 154 ITGQAKA--VPKHAVYSGSKGAIETFARCMAIDMADKKIT-VNVVAPGGIKT 202 (272)
T ss_dssp GGGTCSS--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCBSS
T ss_pred ccccccc--ccchhhHHHHHHHHHHHHHHHHHHhchhCeE-EEEEccCCcCC
Confidence 7765542 5777889999999999999999999999999 88999999975
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.8e-40 Score=268.56 Aligned_cols=193 Identities=20% Similarity=0.261 Sum_probs=164.5
Q ss_pred cccccccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
++..+|+||++|||||+| |||+++|++|+++|++ |++.+|++...+...+... .+.+..++++|+++++++++++
T Consensus 1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~--V~i~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~ 77 (256)
T d1ulua_ 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAERLRPEAEKLAE-ALGGALLFRADVTQDEELDALF 77 (256)
T ss_dssp CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHH-HTTCCEEEECCTTCHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEeCcHHHHHHHHHhhh-ccCcccccccccCCHHHHHHHH
Confidence 356789999999999987 9999999999999997 8888887654444433333 3457788999999999999999
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+++.+++|+||++|||||...... ....+.+.+.++|+..+++|+.+++.++|++.|.|+++ ++||+++
T Consensus 78 ~~~~~~~g~iDilVnnag~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--------G~Iv~is 146 (256)
T d1ulua_ 78 AGVKEAFGGLDYLVHAIAFAPREA---MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTLT 146 (256)
T ss_dssp HHHHHHHSSEEEEEECCCCCCHHH---HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEEE
T ss_pred HHHHHhcCCceEEEeccccccccc---cccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--------CEEEEEe
Confidence 999999999999999999753100 13356778889999999999999999999999999764 3999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ .|++..|+++|+|+++|+++++.|++++||| +|+|+||.|++
T Consensus 147 S~~~~~~---~~~~~~Y~asKaal~~ltr~lA~ela~~gIr-VN~I~PG~i~t 195 (256)
T d1ulua_ 147 YYASEKV---VPKYNVMAIAKAALEASVRYLAYELGPKGVR-VNAISAGPVRT 195 (256)
T ss_dssp CGGGTSB---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEEEECCC--
T ss_pred ehHhcCC---CCCchHHHHHHHHHHHHHHHHHHHhcccCCE-Eeeeccceeee
Confidence 9998877 7889999999999999999999999999999 88999999874
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.6e-40 Score=268.11 Aligned_cols=178 Identities=12% Similarity=0.120 Sum_probs=161.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
|+|||||++|||+++|++|+++|++ |++.+|+.+..+++...... +..+|++++++++++++++.++||+||
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~--V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 8999999999999999999999997 99999988777665544332 235899999999999999999999999
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCC
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~ 189 (231)
+||||||+.. +..++.+.+.++|++.+++|+.++++++|+++|+|++++.| +||++||..+..+ .
T Consensus 74 iLVnNAg~~~------~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G------~IV~isS~~~~~~---~ 138 (252)
T d1zmta1 74 VLVSNDIFAP------EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG------HIIFITSATPFGP---W 138 (252)
T ss_dssp EEEEECCCCC------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCSTTTSC---C
T ss_pred EEEECCcCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccc------eeecccccccccc---c
Confidence 9999999764 45788999999999999999999999999999999998876 9999999998776 7
Q ss_pred CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 190 GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 190 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+++.+|+++|+|+.+|+|+++.|++++||| +|+|+||.|++
T Consensus 139 ~~~~~Y~asKaal~~lt~~lA~ela~~gIr-VN~I~PG~i~T 179 (252)
T d1zmta1 139 KELSTYTSARAGACTLANALSKELGEYNIP-VFAIGPNYLHS 179 (252)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCC-EEEEEESSBCC
T ss_pred ccccccccccccHHHHHHHHHHHhcccCcE-EEEEecCCCcC
Confidence 888999999999999999999999999999 88999999974
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.2e-39 Score=262.54 Aligned_cols=193 Identities=30% Similarity=0.422 Sum_probs=166.9
Q ss_pred eEEEEecCCCchhHHHHHHHH---hcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH--
Q 026924 29 GVSLVQGASRGIGLEFAKQLL---EKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-- 103 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~---~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~-- 103 (231)
|++|||||++|||+++|++|+ +.|++ |++++|+++.++.+.++.+. +.++.+++||++|+++++++++++++
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQH--LFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSE--EEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHHHhc-CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 689999999999999999996 47886 99999999988877655444 56899999999999999999999865
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC-----cccCceEEEEec
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG-----IERDVAVVANLS 178 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~iv~is 178 (231)
+++++|+||||||+.. +...+.+.+.++|++.+++|+.+++.++++++|+|++++.+ .....+++|+++
T Consensus 80 ~~~~iDiLvnNAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~ 153 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAP------KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS 153 (248)
T ss_dssp GGGCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred hcCCcceEEeeccccc------cCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence 6789999999999864 45667889999999999999999999999999999865211 001135999999
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+.....+.+++.+|++||+|+.+|+++++.|++++||+ +|+|+||.|++
T Consensus 154 S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~-vn~v~PG~v~T 205 (248)
T d1snya_ 154 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIM-CVSLHPGWVKT 205 (248)
T ss_dssp CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCE-EEEECCCSBCS
T ss_pred ccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeE-EEEcCCCcccC
Confidence 99988776667788899999999999999999999999999 77999999986
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=2.5e-40 Score=265.31 Aligned_cols=182 Identities=18% Similarity=0.214 Sum_probs=158.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|++|+++|++ |++++|+.+.+ .+..++.+.++.++++|++++++++++++++.++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~ 76 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREERLL---AEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE 76 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHH---HHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHH---HHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999997 89999987544 4445556788999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|++|++|||||.. ...++.+.+.++|++++++|+.+++.++|++.|+|.+++ .++++|+... .
T Consensus 77 ~g~iDiLinnAg~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~--------~i~~~ss~a~-~ 140 (241)
T d2a4ka1 77 FGRLHGVAHFAGVA-------HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG--------SLVLTGSVAG-L 140 (241)
T ss_dssp HSCCCEEEEGGGGT-------TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC--------EEEEECCCTT-C
T ss_pred hCCccEeccccccc-------cccchhhhhcccccccccccccccccccccccccccccc--------ceeecccccc-c
Confidence 99999999999987 467889999999999999999999999999999987754 6666666543 3
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. .|++..|+++|+|+++|+++++.|++++||| +|+|+||.+|+
T Consensus 141 ~---~~~~~~Y~~sK~al~~lt~~lA~el~~~gIr-vN~I~PG~v~T 183 (241)
T d2a4ka1 141 G---AFGLAHYAAGKLGVVGLARTLALELARKGVR-VNVLLPGLIQT 183 (241)
T ss_dssp C---HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCE-EEEEEECSBCC
T ss_pred c---ccCccccchhhHHHHHHHHHHHHHHhHhCCE-EeeeccCcCCC
Confidence 3 4778899999999999999999999999999 88999999985
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-39 Score=260.37 Aligned_cols=192 Identities=19% Similarity=0.153 Sum_probs=166.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHh---cCCccEEEEeecCCCCccchhhhhhc--CCCceeEEEecCCChHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~---~G~~~~vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
..|+||++|||||++|||+++|++|++ +|++ |++++|+++.++.+.+++.. .+.++.+++||+++++++++++
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~ 79 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSV--MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL 79 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE--EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCE--EEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence 368999999999999999999999986 7996 99999999888887665532 2458999999999999999999
Q ss_pred HHHHH----HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEE
Q 026924 99 KSIKE----KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV 174 (231)
Q Consensus 99 ~~~~~----~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 174 (231)
+.+.+ +++++|++|||+|...+. +..++.+.+.++|++++++|+.++++++|+++|+|++++. ..++|
T Consensus 80 ~~~~~~~~~~~~~~~~lvnnag~~~~~----~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~----~~g~I 151 (259)
T d1oaaa_ 80 SAVRELPRPEGLQRLLLINNAATLGDV----SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG----LSKTV 151 (259)
T ss_dssp HHHHHSCCCTTCCEEEEEECCCCCCCC----SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT----CEEEE
T ss_pred HHHHHhhhhccCceEEEEecccccccC----CCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC----Ccccc
Confidence 99876 356899999999976421 3567888999999999999999999999999999987642 12599
Q ss_pred EEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 175 ANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 175 v~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|++||..+..+ .+++..|++||+|+++|+++++.| ++||| +|+|+||.|++
T Consensus 152 v~isS~~~~~~---~~~~~~Y~asKaal~~lt~~la~e--~~gIr-Vn~v~PG~i~T 202 (259)
T d1oaaa_ 152 VNISSLCALQP---YKGWGLYCAGKAARDMLYQVLAAE--EPSVR-VLSYAPGPLDN 202 (259)
T ss_dssp EEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHH--CTTEE-EEEEECCSBSS
T ss_pred cccccccccCC---CccchHHHHHHHHHHHHHHHHHhC--CCCCE-EEEEEcCCCCC
Confidence 99999998877 788999999999999999999999 67999 78999999975
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=7.4e-39 Score=255.70 Aligned_cols=172 Identities=18% Similarity=0.150 Sum_probs=151.3
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
|+||++|||||++|||+++|++|+++|++ |++++|+++.++. . ...++.||+++. ++.+.+++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~--V~~~~r~~~~l~~-------~--~~~~~~~Dv~~~------~~~~~~~~ 64 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNEELLKR-------S--GHRYVVCDLRKD------LDLLFEKV 64 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH-------T--CSEEEECCTTTC------HHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHh-------c--CCcEEEcchHHH------HHHHHHHh
Confidence 68999999999999999999999999997 9999997643222 1 234578999864 45566788
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
++||+||||||.. ...++.+.+.++|++.+++|+.+++.++|+++|.|++++.| ++|+++|..+..+
T Consensus 65 g~iD~lVnnAG~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G------~ii~i~S~~~~~~ 131 (234)
T d1o5ia_ 65 KEVDILVLNAGGP-------KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG------RIVAITSFSVISP 131 (234)
T ss_dssp CCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSC
T ss_pred CCCcEEEeccccc-------CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccc------ccccccccccccc
Confidence 9999999999976 46788999999999999999999999999999999988775 9999999887766
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.++...|+++|+|+.+|+|+++.|++++||| +|+|+||.+++
T Consensus 132 ---~~~~~~Y~asKaal~~ltk~lA~ela~~gIr-VN~I~PG~v~T 173 (234)
T d1o5ia_ 132 ---IENLYTSNSARMALTGFLKTLSFEVAPYGIT-VNCVAPGWTET 173 (234)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSBCC
T ss_pred ---ccccccchhHHHHHHHHHHHHHHHhcccCeE-EeecccCccch
Confidence 7888899999999999999999999999999 88999999975
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-39 Score=263.30 Aligned_cols=185 Identities=24% Similarity=0.300 Sum_probs=160.2
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEE-EEeecCCCCccchhh---hhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCV-IATCRNPNGATGLLD---LKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~v-i~~~r~~~~~~~~~~---~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.|++|||||++|||+++|++|++.|+++.+ ....|+.+..+.+.+ .....+.++.+++||++|+++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 589999999999999999999999998322 234455444443333 2334467899999999999999999998754
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
|++|++|||+|.. ....+.+.+.++|++.+++|+.+++.++++++|+|++++.| +||++||..+.
T Consensus 82 --g~idilvnnag~~-------~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G------~Iv~isS~~g~ 146 (285)
T d1jtva_ 82 --GRVDVLVCNAGLG-------LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG------RVLVTGSVGGL 146 (285)
T ss_dssp --SCCSEEEECCCCC-------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEGGGT
T ss_pred --cchhhhhhccccc-------ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCC------ceEEEechhhc
Confidence 8999999999987 46788899999999999999999999999999999988765 99999999998
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ .|++..|++||+|+.+|+++++.|++++||+ +|+|+||.|++
T Consensus 147 ~~---~~~~~~Y~asKaal~~l~~~la~El~~~gIr-Vn~V~PG~v~T 190 (285)
T d1jtva_ 147 MG---LPFNDVYCASKFALEGLCESLAVLLLPFGVH-LSLIECGPVHT 190 (285)
T ss_dssp SC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred CC---CCCchHHHHHHHHHHHHHHHHHHHhhccCcE-EEEEecCCCCC
Confidence 87 7889999999999999999999999999999 77999999985
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-38 Score=257.13 Aligned_cols=186 Identities=20% Similarity=0.180 Sum_probs=168.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh-hhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-KNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~-~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
|+||++|||||++|||+++|++|+++|++ |++++|+++.++++.++ ....+..+..+.+|+++.+.+..+++++.+.
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~--Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999997 99999999888886554 4455678999999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+|.+|+++||+|.. ....+.+.+.++|++++++|+.+++.+++.++|+|++.+ | ++|+++|..+..
T Consensus 90 ~g~~~~li~nag~~-------~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G------~ii~isS~~~~~ 155 (269)
T d1xu9a_ 90 MGGLDMLILNHITN-------TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-G------SIVVVSSLAGKV 155 (269)
T ss_dssp HTSCSEEEECCCCC-------CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEEEGGGTS
T ss_pred hCCccccccccccc-------cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-C------cceEeccchhcC
Confidence 99999999999987 366778889999999999999999999999999997543 4 999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhcccc--CCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKE--GSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~--gi~~~~~v~pg~~~~ 231 (231)
+ .|++..|++||+|+++|+++|+.|++++ ||+ +|+|+||.||+
T Consensus 156 ~---~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~-V~~v~PG~v~T 200 (269)
T d1xu9a_ 156 A---YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS-ITLCVLGLIDT 200 (269)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEEEEECCBCC
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEE-EEEEecCcCCC
Confidence 7 7899999999999999999999999865 588 77999999986
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=3.9e-38 Score=259.51 Aligned_cols=194 Identities=13% Similarity=0.200 Sum_probs=171.7
Q ss_pred ccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh-hhhhcCCCceeEEEecCCChHHHHHHH
Q 026924 20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQLDLTVESTIEASA 98 (231)
Q Consensus 20 ~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~-~~~~~~~~~v~~~~~Dls~~~~v~~~~ 98 (231)
++++.+|+||++|||||++|||+++|++|+++|++ |++++|+.+.++... ++.+..+.++.++++|+++++++++++
T Consensus 17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~--Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~ 94 (294)
T d1w6ua_ 17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV 94 (294)
T ss_dssp CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHh
Confidence 45567999999999999999999999999999997 999999988777754 444556788999999999999999999
Q ss_pred HHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 99 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+.+.++++++|++|||||.. ....+.+.+.++|++.+.+|+...+.+.+...+.+.....+ +.+++++
T Consensus 95 ~~~~~~~g~iDilvnnAg~~-------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~i~~~s 162 (294)
T d1w6ua_ 95 SELIKVAGHPNIVINNAAGN-------FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG-----AAFLSIT 162 (294)
T ss_dssp HHHHHHTCSCSEEEECCCCC-------CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----EEEEEEC
T ss_pred hhhhhhccccchhhhhhhhc-------cccccccchhhhhhhheeeecccchhhhhhhhccccccccc-----ccccccc
Confidence 99999999999999999987 46678889999999999999999999988888777665544 4788888
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
|..+..+ .+++.+|+++|+|+++|+|+++.|++++||| +|+|+||.|++
T Consensus 163 s~~~~~~---~~~~~~YsasKaal~~ltk~lA~ela~~gIr-VN~I~PG~i~T 211 (294)
T d1w6ua_ 163 TIYAETG---SGFVVPSASAKAGVEAMSKSLAAEWGKYGMR-FNVIQPGPIKT 211 (294)
T ss_dssp CTHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred cchhhhc---ccccchHHHHHHHHHHHHHHHHHHHhHhCeE-EEEEccCcccc
Confidence 8877766 6888899999999999999999999999999 78999999975
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-39 Score=261.11 Aligned_cols=185 Identities=20% Similarity=0.214 Sum_probs=159.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++|||||++|||+++|++|++. |++ |++++|+++..+...++++..+.++.+++||++|.++++++++++.+++|+
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGD--VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSE--EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 56799999999999999999986 775 999999999888877777776788999999999999999999999999999
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD- 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~- 186 (231)
||+||||||+.. .....+.+.++|++.+++|+.+++++++.++|+|+++ ++||+++|..+..+.
T Consensus 82 iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--------g~ivnisS~~~~~~~~ 146 (275)
T d1wmaa1 82 LDVLVNNAGIAF-------KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--------GRVVNVSSIMSVRALK 146 (275)
T ss_dssp EEEEEECCCCCC-------CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHHHHHHH
T ss_pred cEEEEEcCCcCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCcccccccceecccc
Confidence 999999999874 4555667788999999999999999999999999764 399999997654320
Q ss_pred -------------------------------------CCCCCccchhhhHHHHHHHHHHhhhhccc----cCCceeeecc
Q 026924 187 -------------------------------------NRLGGWHSYRASKAALNHDKICVSGVWSK----EGSSYMYSVA 225 (231)
Q Consensus 187 -------------------------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~----~gi~~~~~v~ 225 (231)
.+..+...|++||+++.+|++.+++|+++ .||+ +|+|+
T Consensus 147 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~-vn~v~ 225 (275)
T d1wmaa1 147 SCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKIL-LNACC 225 (275)
T ss_dssp TSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCE-EEEEE
T ss_pred ccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EEEEe
Confidence 01223357999999999999999999977 4999 77999
Q ss_pred CCCCCC
Q 026924 226 SRHCRY 231 (231)
Q Consensus 226 pg~~~~ 231 (231)
||.|++
T Consensus 226 PG~v~T 231 (275)
T d1wmaa1 226 PGWVRT 231 (275)
T ss_dssp CCSBCS
T ss_pred cccccC
Confidence 999975
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=6.5e-38 Score=252.55 Aligned_cols=195 Identities=28% Similarity=0.370 Sum_probs=160.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.|++|||||++|||+++|++|+++|+.++|++.+|+.+.++++.+ ..+.++.++++|++++++++++++++.+.++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 78 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence 4699999999999999999999999985468888999877665443 3456899999999999999999999998876
Q ss_pred --CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCC-----cccCceEEEEecc
Q 026924 107 --SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG-----IERDVAVVANLSA 179 (231)
Q Consensus 107 --~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~iv~iss 179 (231)
+||+||||||+.. +..++.+.+.++|++.+++|+.|++++++.++|+|++++.+ .....+.++++++
T Consensus 79 ~~~idilinnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~ 152 (250)
T d1yo6a1 79 SDGLSLLINNAGVLL------SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152 (250)
T ss_dssp GGCCCEEEECCCCCC------CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred CCCeEEEEEcCcccC------CCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence 4999999999864 45667788999999999999999999999999999765321 1113358999888
Q ss_pred CccccCC----CCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGD----NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~----~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+.... .+..+..+|++||+|+.+|+++++.|+++.||+ +|+|+||.|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~-v~~i~PG~v~T 207 (250)
T d1yo6a1 153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVL-VVNFCPGWVQT 207 (250)
T ss_dssp GGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCE-EEEEECCCC--
T ss_pred ccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeE-EEEEecCCCCC
Confidence 7655432 112334579999999999999999999999999 77999999985
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-37 Score=249.43 Aligned_cols=180 Identities=22% Similarity=0.276 Sum_probs=155.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|+||++|||||++|||+++|+.|+++|++ |++++|+++.++++.+ ...+....+|+.+++.++ +..++
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~--Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~----~~~~~ 71 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEK-----YPGIQTRVLDVTKKKQID----QFANE 71 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHH----HHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh-----ccCCceeeeecccccccc----ccccc
Confidence 489999999999999999999999999997 9999998766554433 235677888998766554 44556
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++++|+||||+|.. +..++.+.+.++|++.+++|+.+++.++|++.|+|.+++.| +||+++|..+..
T Consensus 72 ~~~id~lVn~ag~~-------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g------~Ii~isS~~~~~ 138 (245)
T d2ag5a1 72 VERLDVLFNVAGFV-------HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG------NIINMSSVASSV 138 (245)
T ss_dssp CSCCSEEEECCCCC-------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTTT
T ss_pred cccceeEEeccccc-------CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc------eeeeeechhhcc
Confidence 68999999999987 46778999999999999999999999999999999988775 999999987754
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
. +.+++..|+++|+|+++|+|+++.|++++||| +|+|+||.||+
T Consensus 139 ~--~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIr-vN~I~PG~i~T 182 (245)
T d2ag5a1 139 K--GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR-CNCVCPGTVDT 182 (245)
T ss_dssp B--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESCEEC
T ss_pred C--CccchhHHHHHHHHHHHHHHHHHHHhhhhCcE-EEEEeeceeec
Confidence 2 26788899999999999999999999999999 78999999875
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-36 Score=243.94 Aligned_cols=197 Identities=17% Similarity=0.209 Sum_probs=169.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||++|||||++|||+++|++|+++|++ |++++|+++.++.+.+++ +.......+|+.+.+.++...+++...
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccc
Confidence 689999999999999999999999999997 999999988777654443 568889999999999999999999999
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
++.+|.+++|++........ ...+..+.+.++|++.+++|+.++++++|++.|+|..+........++||+++|..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~ 155 (248)
T d2o23a1 77 FGRVDVAVNCAGIAVASKTY-NLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE 155 (248)
T ss_dssp HSCCCEEEECCCCCCCCCSE-ETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred cccccccccccccccCCCcc-cccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence 99999999998765422111 23456778889999999999999999999999998765322222346999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++.+|+++|+|+++|+++++.|++++||| +|+|+||.+++
T Consensus 156 ~---~~~~~~Y~asKaal~~lt~~la~e~~~~gIr-vN~I~PG~i~T 198 (248)
T d2o23a1 156 G---QVGQAAYSASKGGIVGMTLPIARDLAPIGIR-VMTIAPGLFGT 198 (248)
T ss_dssp C---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECCBCC
T ss_pred C---CCCchHHHHHHHHHHHHHHHHHHHhcccCcc-eeeeccCceec
Confidence 7 7889999999999999999999999999999 78999999875
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8e-35 Score=232.44 Aligned_cols=175 Identities=13% Similarity=0.113 Sum_probs=150.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+||++|||||++|||+++|++|+++|++ |+++++++.... .......+|.++.++.+.+..++.+.+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~--V~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG 68 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCccccc----------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999997 888888654321 233455678888888888888887764
Q ss_pred -CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 106 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
+++|+||||||... ......+.+.++|++.+++|+.+++++.++++|+|+++ ++||++||..+..
T Consensus 69 ~~~iD~lInnAG~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--------G~Iv~isS~~~~~ 134 (236)
T d1dhra_ 69 DQKVDAILCVAGGWA------GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--------GLLTLAGAKAALD 134 (236)
T ss_dssp TCCEEEEEECCCCCC------CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGGS
T ss_pred CCCceEEEECCcccc------cccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--------cceeEEccHHHcC
Confidence 47999999999753 34556677889999999999999999999999999753 3999999999887
Q ss_pred CCCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 185 GDNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 185 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
+ .+++..|++||+|+++|+++++.|++ ++||+ +|+|+||.+|+
T Consensus 135 ~---~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~-vn~v~PG~v~T 179 (236)
T d1dhra_ 135 G---TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA-AIAVLPVTLDT 179 (236)
T ss_dssp C---CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCE-EEEEEESCEEC
T ss_pred C---ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEE-EEEEEeccCcC
Confidence 7 78899999999999999999999998 68999 77999999975
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.6e-33 Score=224.78 Aligned_cols=174 Identities=12% Similarity=0.075 Sum_probs=145.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH--Hc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KY 105 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~--~~ 105 (231)
++++|||||++|||+++|++|+++|++ |++++|++.... .......+|+.+.++.....+.+.+ ++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~--V~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG 69 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCchhcc----------cccceeccccCchhHHHHHHHHHHHHhcC
Confidence 355799999999999999999999997 899999865322 1233455678777777777777766 45
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
++||+||||||... ......+.+.++|+.++++|+.+++.++|+++|+|+++ ++|+++||..+..+
T Consensus 70 g~iD~linnAG~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--------g~Iv~isS~~~~~~ 135 (235)
T d1ooea_ 70 SQVDGVFCVAGGWA------GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--------GLLQLTGAAAAMGP 135 (235)
T ss_dssp CCEEEEEECCCCCC------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGGSC
T ss_pred CCeeEEEECCcccc------cccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--------eEEEEeccHHhcCC
Confidence 89999999999764 33445566678899999999999999999999999763 39999999988877
Q ss_pred CCCCCCccchhhhHHHHHHHHHHhhhhcc--ccCCceeeeccCCCCCC
Q 026924 186 DNRLGGWHSYRASKAALNHDKICVSGVWS--KEGSSYMYSVASRHCRY 231 (231)
Q Consensus 186 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~--~~gi~~~~~v~pg~~~~ 231 (231)
.+++.+|++||+|+++|+++++.|++ +.+|+ +|+|+||.+|+
T Consensus 136 ---~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~-v~~i~Pg~~~T 179 (235)
T d1ooea_ 136 ---TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA-VLTIMPVTLDT 179 (235)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCE-EEEEEESCBCC
T ss_pred ---cccccchHHHHHHHHHHHHHHHHHhccCCCceE-EEEEecCcCcC
Confidence 78999999999999999999999998 57888 77999999985
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=3.1e-33 Score=228.61 Aligned_cols=188 Identities=18% Similarity=0.164 Sum_probs=145.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecC-CCCccchhhhhh-cCCCcee-----------------EEEecCCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKN-RFPERLD-----------------VLQLDLTV 90 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~-~~~~~~~~~~~~-~~~~~v~-----------------~~~~Dls~ 90 (231)
++|||||++|||+++|++|+++|++ |++.+++ ++..+.+.+++. ..+.... .+.+|+++
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~--V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 8999999999999999999999997 7776654 444444444432 3333444 44566999
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhch--------------HHHhhhhhhhhhHHHHHHHHh
Q 026924 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK--------------SSLMLAYEVNAVGPILVIKHM 156 (231)
Q Consensus 91 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~n~~~~~~~~~~~ 156 (231)
+++++++++++.+++|+||+||||||... ..++.+.+. ..|...+.+|+.+++++.|.+
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 154 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF 154 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccC-------CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccc
Confidence 99999999999999999999999999874 233333333 345568999999999999998
Q ss_pred hhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 157 SPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 157 ~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+.+...........+.|++++|..+..+ .+++.+|+++|+|+.+|+++++.|++++||| +|+|+||.++
T Consensus 155 ~~~~~~~~~~~~~~~~~ii~~~s~~~~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIr-vN~I~PG~t~ 224 (284)
T d1e7wa_ 155 AHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALELAPLQIR-VNGVGPGLSV 224 (284)
T ss_dssp HHHHHTSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBC
T ss_pred cchhhhhHHHhcCCCCcccccccccccCC---ccceeeeccccccchhhhHHHHHHhCCcccc-cccccccccc
Confidence 87654332222223358999999887766 7888999999999999999999999999999 8899999764
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-33 Score=224.90 Aligned_cols=190 Identities=15% Similarity=0.191 Sum_probs=161.0
Q ss_pred cccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.|+||++|||||++ |||+++|+.|+++|++ |++.+|+++..+.+.+... ...+...+.+|+++..++.+.++++.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~--V~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQNDKLKGRVEEFAA-QLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESSTTTHHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHh-hcCCcceeecccchHHHHHHHHHHhh
Confidence 37899999999998 8999999999999997 8888998665444443333 34567888999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.++++|++|||++...... .+....+....+.|...++.|+.+.+.+.+.+.+.+.+++ .|+++||..+
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~Ii~iss~~~ 148 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQ--LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGS--------ALLTLSYLGA 148 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGG--GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE--------EEEEEECGGG
T ss_pred hcccccceEEEeeccccccc--ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--------EEEEecchhh
Confidence 99999999999998753111 1233445677788999999999999999999999986543 7999999887
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .|.+..|+++|+|+++|+++++.|++++||| +|+|+||.|++
T Consensus 149 ~~~---~~~~~~Y~~sKaal~~ltr~lA~el~~~gIr-VN~I~PG~i~T 193 (258)
T d1qsga_ 149 ERA---IPNYNVMGLAKASLEANVRYMANAMGPEGVR-VNAISAGPIRT 193 (258)
T ss_dssp TSB---CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEE-EEEEEECCCCC
T ss_pred ccC---CCCcHHHHHHHHHHHHHHHHHHHHhCccCce-eeccccccccc
Confidence 776 6888899999999999999999999999999 88999999975
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=8.6e-33 Score=230.77 Aligned_cols=186 Identities=19% Similarity=0.254 Sum_probs=148.1
Q ss_pred cCeEEEEec--CCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh------------hhcCCCceeEE--------
Q 026924 27 KGGVSLVQG--ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL------------KNRFPERLDVL-------- 84 (231)
Q Consensus 27 ~~k~~LVtG--as~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~------------~~~~~~~v~~~-------- 84 (231)
.+|++|||| +++|||+++|+.|+++|++ |++.+++.......... ..+........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~--V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK--IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT 78 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSS
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCE--EEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehh
Confidence 379999999 5589999999999999997 88877654322111100 00001111222
Q ss_pred ------------EecCCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHH
Q 026924 85 ------------QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILV 152 (231)
Q Consensus 85 ------------~~Dls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 152 (231)
.+|+++.++++++++++.+++|+||++|||+|...+ ...++.+.+.++|++.+++|+++++.+
T Consensus 79 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~-----~~~~~~~~~~~~~~~~~~vn~~~~~~~ 153 (329)
T d1uh5a_ 79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-----VQKDLLNTSRKGYLDALSKSSYSLISL 153 (329)
T ss_dssp GGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccc-----cCCChhhhhhhhhhhhcccchhHHHHH
Confidence 347778899999999999999999999999997631 235788899999999999999999999
Q ss_pred HHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCC-ccchhhhHHHHHHHHHHhhhhccc-cCCceeeeccCCCCC
Q 026924 153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG-WHSYRASKAALNHDKICVSGVWSK-EGSSYMYSVASRHCR 230 (231)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~-~gi~~~~~v~pg~~~ 230 (231)
+|+++|+|.++ ++||+++|..+..+ .|+ ...|+++|+|+++|+|+++.|+++ +||| +|+|+||.|+
T Consensus 154 ~k~~~~~m~~~--------GsIv~iss~~~~~~---~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIR-VNaI~PG~i~ 221 (329)
T d1uh5a_ 154 CKYFVNIMKPQ--------SSIISLTYHASQKV---VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIR-INTISAGPLK 221 (329)
T ss_dssp HHHHGGGEEEE--------EEEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE-EEEEEECCCC
T ss_pred HHHHHhhcccc--------cccccceeehhccc---ccccchhhhhhhccccccchhhHHHHhcccCcE-EEEEecCccc
Confidence 99999999764 39999999887766 565 356899999999999999999987 6999 8899999997
Q ss_pred C
Q 026924 231 Y 231 (231)
Q Consensus 231 ~ 231 (231)
|
T Consensus 222 T 222 (329)
T d1uh5a_ 222 S 222 (329)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.97 E-value=7.9e-32 Score=221.57 Aligned_cols=192 Identities=17% Similarity=0.200 Sum_probs=147.3
Q ss_pred ccccccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhh---------hhcCC---CceeEEEec
Q 026924 22 ASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---------KNRFP---ERLDVLQLD 87 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~---------~~~~~---~~v~~~~~D 87 (231)
++++|+||++|||||+| |||+++|++|+++|++ |++.+|++......... ..... .--...++|
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~--Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE--ILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLD 79 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEEC
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 56789999999999876 9999999999999997 88888754221110000 00000 001122332
Q ss_pred --------------------CCChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhh
Q 026924 88 --------------------LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147 (231)
Q Consensus 88 --------------------ls~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 147 (231)
.++..+++++++++.++||+||+||||||.... ...++.+.+.++|++.+++|+.
T Consensus 80 ~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~-----~~~~~~~~~~~~~~~~~~vn~~ 154 (297)
T d1d7oa_ 80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-----VSKPLLETSRKGYLAAISASSY 154 (297)
T ss_dssp TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTH
T ss_pred hhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccc-----cccchhhhhcccccccccchhh
Confidence 356667899999999999999999999997520 2457889999999999999999
Q ss_pred HHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCCCCCccchhhhHHHHHHHHHHhhhhcc-ccCCceeeeccC
Q 026924 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWS-KEGSSYMYSVAS 226 (231)
Q Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~~~~~v~p 226 (231)
+++.+++++++.+.+++ .++++++....... .+....|+++|+++.++++.++.|++ ++||| +|+|+|
T Consensus 155 ~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~--~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIr-vN~I~P 223 (297)
T d1d7oa_ 155 SFVSLLSHFLPIMNPGG--------ASISLTYIASERII--PGYGGGMSSAKAALESDTRVLAFEAGRKQNIR-VNTISA 223 (297)
T ss_dssp HHHHHHHHHGGGEEEEE--------EEEEEECGGGTSCC--TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE-EEEEEE
T ss_pred hhhhhhhHHHHHhhcCC--------cceeeeehhhcccc--cccccceecccccccccccccchhccccceEE-eccccc
Confidence 99999999999988765 56666655544332 46667899999999999999999997 68999 889999
Q ss_pred CCCCC
Q 026924 227 RHCRY 231 (231)
Q Consensus 227 g~~~~ 231 (231)
|.+++
T Consensus 224 G~i~T 228 (297)
T d1d7oa_ 224 GPLGS 228 (297)
T ss_dssp CCCBC
T ss_pred ccccc
Confidence 99975
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=6e-31 Score=209.91 Aligned_cols=182 Identities=20% Similarity=0.173 Sum_probs=147.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|++|||||++|||+++|++|+++|++ |++++|+++. .+....++|+++......+..+..+...
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~--V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~- 65 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYR--VVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEAP- 65 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCccc------------ccceEeeccccchhhhHHHHHhhhcccc-
Confidence 489999999999999999999999997 9999998653 3456788999999999999988876654
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
.+.++.+++...... ........+.+.|++.+++|+.+.+.+++.+.+.+.....-.....++||++||..+..+
T Consensus 66 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-- 140 (241)
T d1uaya_ 66 LFAVVSAAGVGLAEK---ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-- 140 (241)
T ss_dssp EEEEEECCCCCCCCC---SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--
T ss_pred ccchhhhhhcccccc---ccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC--
Confidence 455555665432111 234445677788999999999999999999998854432212223359999999998877
Q ss_pred CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 188 RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 188 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+++..|+++|+|+.+|+++++.|++++||| +|+|+||.|++
T Consensus 141 -~~~~~~Y~asKaal~~lt~~lA~ela~~gIr-VN~V~PG~i~T 182 (241)
T d1uaya_ 141 -QIGQAAYAASKGGVVALTLPAARELAGWGIR-VVTVAPGLFDT 182 (241)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEECSCSS
T ss_pred -CCCchhhHHHHHHHHHHHHHHHHHHhhcCCc-eeeecCCcccc
Confidence 7889999999999999999999999999999 88999999975
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.97 E-value=3.1e-31 Score=215.72 Aligned_cols=189 Identities=20% Similarity=0.222 Sum_probs=140.6
Q ss_pred cccCeEEEEecCCC--chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~--gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.|+||++|||||+| |||+++|++|+++|++ |++++|+++..+.+.++. +.+....+..+|++++++++++++++.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~--V~i~~r~~~~~~~~~~l~-~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNESLEKRVRPIA-QELNSPYVYELDVSKEEHFKSLYNSVK 78 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE--EEEEESSTTTHHHHHHHH-HHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHH-hhCCceeEeeecccchhhHHHHHHHHH
Confidence 36899999999865 9999999999999997 999999865444444443 335677889999999999999999999
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
+.+|++|++|||+|...... ......+.....+...+..+..+.....+...+.+.. + ..|+++++...
T Consensus 79 ~~~g~id~lV~nag~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~i~~~s~~~~ 147 (274)
T d2pd4a1 79 KDLGSLDFIVHSVAFAPKEA---LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---G-----ASVLTLSYLGS 147 (274)
T ss_dssp HHTSCEEEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---E-----EEEEEEECGGG
T ss_pred HHcCCCCeEEeecccccccc---cccccccccchhhhhhhcccccccccccccccccccc---C-----cceeeeccccc
Confidence 99999999999999764110 1222233333444444445555555555555544332 1 24555555444
Q ss_pred ccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 183 SIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 183 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
..+ .+.+..|+++|+|+++++++++.|++++||| +|+|+||.+++
T Consensus 148 ~~~---~~~~~~y~asK~al~~ltr~lA~e~~~~GIr-vN~I~PG~v~T 192 (274)
T d2pd4a1 148 TKY---MAHYNVMGLAKAALESAVRYLAVDLGKHHIR-VNALSAGPIRT 192 (274)
T ss_dssp TSB---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCCCC
T ss_pred ccc---cccchhhhHHHHHHHHHHHhhHHHhcCcCce-ecccccCcccC
Confidence 433 5777889999999999999999999999999 88999999874
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.97 E-value=1.8e-30 Score=210.45 Aligned_cols=188 Identities=17% Similarity=0.174 Sum_probs=153.2
Q ss_pred cccCeEEEEecC--CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGa--s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
-|+||++||||| ++|||+++|++|+++|++ |++++|+.++.. .+..+..+.+...++||++++++++++++.+.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~--Vil~~~~~~~~~--~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~ 78 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ--LVLTGFDRLRLI--QRITDRLPAKAPLLELDVQNEEHLASLAGRVT 78 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE--EEEEECSCHHHH--HHHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE--EEEEeCChHHHH--HHHHHHcCCceeeEeeecccccccccccchhh
Confidence 368999999995 579999999999999997 888998875432 22334456788899999999999999999998
Q ss_pred HHc---CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEecc
Q 026924 103 EKY---GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA 179 (231)
Q Consensus 103 ~~~---g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss 179 (231)
+.+ +++|++|||+|... .......++.+.+.++|.+.+.+|+...+...+...+.+... .+++++|
T Consensus 79 ~~~~~~~~ld~~i~~ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~~~s 147 (268)
T d2h7ma1 79 EAIGAGNKLDGVVHSIGFMP--QTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG---------GSIVGMD 147 (268)
T ss_dssp HHHCTTCCEEEEEECCCCCC--GGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---------EEEEEEE
T ss_pred hccccCCCcceeeecccccC--ccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccc---------ccccccc
Confidence 764 67999999999753 111134466788899999999999999999999988876542 4445555
Q ss_pred CccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 180 RVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 180 ~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
...... .|++..|+++|+|+.+|+++++.|++++||| +|+|+||.+++
T Consensus 148 ~~~~~~---~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIr-VN~V~PG~v~T 195 (268)
T d2h7ma1 148 FDPSRA---MPAYNWMTVAKSALESVNRFVAREAGKYGVR-SNLVAAGPIRT 195 (268)
T ss_dssp CCCSSC---CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEEECCCCC
T ss_pred cccccc---CcccchhhccccchhhccccchhhhhccCCc-ceEEecCCCCC
Confidence 554444 6888899999999999999999999999999 88999999974
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.97 E-value=4.9e-31 Score=212.96 Aligned_cols=177 Identities=18% Similarity=0.207 Sum_probs=149.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc---hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+++|+|||||++|||+++|++|+++|++ +|++++|+....+. +.++++..+.++.++.||++|+++++++++++.+
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~ 86 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 86 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence 3679999999999999999999999997 68888987544333 4444455678999999999999999999999865
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
. +++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+.+.+.+ .+.+ ++|++||..+.
T Consensus 87 ~-~~i~~vv~~ag~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~~~------~iv~~SS~a~~ 148 (259)
T d2fr1a1 87 D-VPLSAVFHAAATL-------DDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLT------AFVLFSSFASA 148 (259)
T ss_dssp T-SCEEEEEECCCCC-------CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCS------EEEEEEEHHHH
T ss_pred c-ccccccccccccc-------cccccccccHHHHHHHhhhhccchhHHHHHhhc----cCCc------eEeeecchhhc
Confidence 4 6899999999987 477889999999999999999999999886543 3333 99999999999
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCC
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCR 230 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~ 230 (231)
.+ .+++..|+++|+++++|++.+ +..|++ +++|+||.++
T Consensus 149 ~g---~~~~~~YaAaka~l~~la~~~----~~~Gi~-v~~I~pg~~~ 187 (259)
T d2fr1a1 149 FG---APGLGGYAPGNAYLDGLAQQR----RSDGLP-ATAVAWGTWA 187 (259)
T ss_dssp TC---CTTCTTTHHHHHHHHHHHHHH----HHTTCC-CEEEEECCBC
T ss_pred cC---CcccHHHHHHHHhHHHHHHHH----HhCCCC-EEECCCCccc
Confidence 88 788999999999999887654 567999 6699999864
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.97 E-value=4e-30 Score=207.93 Aligned_cols=196 Identities=19% Similarity=0.222 Sum_probs=147.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc-cchhhh-hhcCCCceeEEEecCCC----hHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDL-KNRFPERLDVLQLDLTV----ESTIEASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-~~~~~~-~~~~~~~v~~~~~Dls~----~~~v~~~~~~~~ 102 (231)
.|+|||||++|||+++|++|+++|++ |++++|+.+.. +++.++ .+..+.+.....+|+.+ ++.++++++++.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~--Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 79 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHH
Confidence 38999999999999999999999997 99999886554 444443 44556678888776654 566788888888
Q ss_pred HHcCCccEEEEccccCCCCCCC----CCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEec
Q 026924 103 EKYGSLNLLINASGILSIPNVL----QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~is 178 (231)
+++|+||++|||||+..+.... .......+...+.+...+..|+.+.+...+...+.+...... ....+.+++++
T Consensus 80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (266)
T d1mxha_ 80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW-RSRNLSVVNLC 158 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEEC
T ss_pred HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccc-ccccccchhhh
Confidence 9999999999999987522111 011122334455677788999999999999888877654321 12335788888
Q ss_pred cCccccCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 179 ARVGSIGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 179 s~~~~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
+..+... .|++..|++||+|+++|+++++.|++++||| +|+|+||.+++
T Consensus 159 ~~~~~~~---~~~~~~Y~asKaal~~lt~~lA~e~~~~gIr-VN~I~PG~i~t 207 (266)
T d1mxha_ 159 DAMTDLP---LPGFCVYTMAKHALGGLTRAAALELAPRHIR-VNAVAPGLSLL 207 (266)
T ss_dssp CGGGGSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE-EEEEEESSBSC
T ss_pred hcccccc---CcchhhhhhhHHHHhhhHHHHHHHhCccCcE-EEEeccCcEec
Confidence 8776655 7899999999999999999999999999999 88999999874
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.93 E-value=6.5e-26 Score=182.15 Aligned_cols=161 Identities=19% Similarity=0.273 Sum_probs=124.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH-cCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-YGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~-~g~ 107 (231)
|++|||||++|||+++|++|+++|++ |++++|++++ ..+|+++++..+....+...+ .+.
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~--V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~ 62 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKG 62 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence 68999999999999999999999997 8888987643 236888888888777666554 467
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc----
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS---- 183 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~---- 183 (231)
+|++|||||+.. ..+.|.....+|..+...+.+...+.+.+...+ .+.++.+....
T Consensus 63 id~lv~~Ag~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 122 (257)
T d1fjha_ 63 MDGLVLCAGLGP--------------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQP------AAVVISSVASAHLAF 122 (257)
T ss_dssp CSEEEECCCCCT--------------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSSCG
T ss_pred CcEEEEcCCCCC--------------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccC------cceeeeeccccchhh
Confidence 999999999752 123456778899999999999999888776544 45544433221
Q ss_pred -----------------------cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCCCC
Q 026924 184 -----------------------IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHCRY 231 (231)
Q Consensus 184 -----------------------~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~~~ 231 (231)
.+ ..++..+|++||+|+++|+|+++.|++++||| +|+|+||.+++
T Consensus 123 ~~~~~~~~~~~g~~~~i~s~~~~~~--~~~~~~~Y~asKaal~~ltr~lA~el~~~gIr-VN~I~PG~i~T 190 (257)
T d1fjha_ 123 DKNPLALALEAGEEAKARAIVEHAG--EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVR-LNTIAPGATET 190 (257)
T ss_dssp GGCTTHHHHHHTCHHHHHHHHHTCC--TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCE-EEEEEECC---
T ss_pred hhhhhhhhccCCcEEEEeeehhccC--CCcchHHHHHHhhhhhcccccccccccccccc-ccccccCCcCC
Confidence 11 12345579999999999999999999999999 88999999974
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.81 E-value=4e-22 Score=153.27 Aligned_cols=161 Identities=13% Similarity=0.096 Sum_probs=114.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+|+||++|||||++|||+++|+.|+++|++ |++++|+.++.+.+.+.+.. ..++....+|+++.+++++++
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~----- 90 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE--VVLCGRKLDKAQAAADSVNK-RFKVNVTAAETADDASRAEAV----- 90 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHH-HHTCCCEEEECCSHHHHHHHT-----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccc--hhhcccchHHHHHHHHHHHh-ccchhhhhhhcccHHHHHHHh-----
Confidence 4789999999999999999999999999997 99999998888776655443 235567889999998876654
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
+++|+||||+|... ...+.++|++.+++|+.+.++....+.+.+...... .+.+..++..+.
T Consensus 91 --~~iDilin~Ag~g~-----------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~ 152 (191)
T d1luaa1 91 --KGAHFVFTAGAIGL-----------ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDK-----GKEYGGKRAFGA 152 (191)
T ss_dssp --TTCSEEEECCCTTC-----------CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCE-----EEEETTEEEECH
T ss_pred --cCcCeeeecCcccc-----------ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccC-----cEEecceEEEec
Confidence 57899999998642 345778999999999888776554443333222211 122211111111
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhcc
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWS 214 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~ 214 (231)
.. .+...|.++|+++..|+++....+.
T Consensus 153 ~~----~g~~~y~~sk~a~~~l~~s~~~~~~ 179 (191)
T d1luaa1 153 LG----IGGLKLKLHRACIAKLFESSEGVFD 179 (191)
T ss_dssp HH----HHHHHHHHHHHHHHHHTSCSCCEES
T ss_pred cC----cCcHHHHHHHHHHHHHHhcCchhcC
Confidence 11 2334699999999998876555443
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=5e-18 Score=141.94 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=113.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-----CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-----GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++|||||+|.||.+++++|++.|++ |+.++|... ..+.+.+.......++.++.+|++|.+++++++++.
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYE--VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc--
Confidence 78999999999999999999999997 888888543 222233333333568999999999999999999876
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
.+|+++|+|+... . ..+.++.+..+++|+.++.++++++...-.+.. .++|++||.. .
T Consensus 78 ---~~d~v~h~aa~~~------~-----~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~-------~r~i~~SS~~-v 135 (357)
T d1db3a_ 78 ---QPDEVYNLGAMSH------V-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK-------TRFYQASTSE-L 135 (357)
T ss_dssp ---CCSEEEECCCCCT------T-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTT-------CEEEEEEEGG-G
T ss_pred ---CCCEEEEeecccc------c-----chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCC-------cEEEEEEchh-h
Confidence 7899999999753 1 122344567899999999999999865432221 2799988854 2
Q ss_pred cCC---------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 184 IGD---------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 184 ~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
+|. .+..+...|+.+|.+.+.+++.+++.+
T Consensus 136 YG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~ 174 (357)
T d1db3a_ 136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY 174 (357)
T ss_dssp GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 221 112235679999999999999988764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=3e-16 Score=129.94 Aligned_cols=156 Identities=16% Similarity=0.069 Sum_probs=116.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch-hhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++|||||+|.||+.++++|++.|++ |++++|.....+.. .........++.++++|++|.+.+.++++.. ++
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~ 74 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence 5999999999999999999999997 77777754443332 2222222468999999999999998888864 68
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
|+|||+|+... ...+.++..+.+++|+.++.++++++...-.+ ++|++||.....+..
T Consensus 75 d~ViHlAa~~~-----------~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~----------~~i~~Ss~~vy~~~~~ 133 (338)
T d1udca_ 75 DTVIHFAGLKA-----------VGESVQKPLEYYDNNVNGTLRLISAMRAANVK----------NFIFSSSATVYGDQPK 133 (338)
T ss_dssp SEEEECCSCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC----------EEEEEEEGGGGCSCCS
T ss_pred CEEEECCCccc-----------hhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCC----------EEEecCcceEEccccc
Confidence 99999998532 22344455678999999999999998765332 788888765332111
Q ss_pred --------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 188 --------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 188 --------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
...+...|+.+|.+.+.+++....+.
T Consensus 134 ~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 167 (338)
T d1udca_ 134 IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ 167 (338)
T ss_dssp SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccccCCCcchHHHHHhhhhHHHHHHHhhc
Confidence 11235689999999999998877665
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.68 E-value=4.3e-16 Score=131.38 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=113.5
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec-------------CCCCccc----hhhhhhcCCCceeEEEecCCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-------------NPNGATG----LLDLKNRFPERLDVLQLDLTV 90 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r-------------~~~~~~~----~~~~~~~~~~~v~~~~~Dls~ 90 (231)
||++|||||+|.||.+++++|++.|++ |+++|. +...... +.......+.++.++.+|++|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~--V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYE--VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 78 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence 688999999999999999999999997 777652 1111111 111122235689999999999
Q ss_pred hHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccC
Q 026924 91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD 170 (231)
Q Consensus 91 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (231)
.+.++++++.. ++|+|+|.|+... ......+.+.....+++|+.++.++++++...-.+
T Consensus 79 ~~~l~~~~~~~-----~~d~ViHlAa~~~--------~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-------- 137 (393)
T d1i24a_ 79 FEFLAESFKSF-----EPDSVVHFGEQRS--------APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE-------- 137 (393)
T ss_dssp HHHHHHHHHHH-----CCSEEEECCSCCC--------HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT--------
T ss_pred HHHHHHHHHhh-----cchheeccccccc--------cccccccccccccccccccccccHHHHHHHHhccc--------
Confidence 99999998876 7999999998542 22233344556678899999999999988654322
Q ss_pred ceEEEEeccCccccCC---------------------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 171 VAVVANLSARVGSIGD---------------------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 171 ~~~iv~iss~~~~~~~---------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+++..||....... .+..+...|+.+|.+.+.+++.+..+.
T Consensus 138 -~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~ 200 (393)
T d1i24a_ 138 -CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW 200 (393)
T ss_dssp -CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred -cceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc
Confidence 166666665332110 012223469999999999999887765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.68 E-value=6.1e-16 Score=128.39 Aligned_cols=157 Identities=16% Similarity=0.144 Sum_probs=114.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+|.||++++++|+++|++ |+++++.... .+...........++.++.+|++|.+++++++... +
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~ 74 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYD--CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----K 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCe--EEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence 78999999999999999999999997 7777764332 22233333333568999999999999998888764 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC--
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-- 185 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~-- 185 (231)
+|+|||+|+... .....+.....+.+|+.++..+++++...-.+ +++++||......
T Consensus 75 ~d~VihlAa~~~-----------~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~----------~~i~~SS~~vyg~~~ 133 (347)
T d1z45a2 75 IDSVIHFAGLKA-----------VGESTQIPLRYYHNNILGTVVLLELMQQYNVS----------KFVFSSSATVYGDAT 133 (347)
T ss_dssp CCEEEECCSCCC-----------HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC----------EEEEEEEGGGGCCGG
T ss_pred CCEEEEcccccc-----------ccccccCcccccccchhhhHHHHHHHHhcccc----------eEEeecceeeecCcc
Confidence 999999998542 11223344567889999999999998654332 8899888553210
Q ss_pred ----------CCCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 186 ----------DNRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 186 ----------~~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
..+..+...|+.+|.+.+.+++.+....
T Consensus 134 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 171 (347)
T d1z45a2 134 RFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD 171 (347)
T ss_dssp GSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh
Confidence 1112234579999999999998887543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.67 E-value=1.3e-15 Score=127.34 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=114.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc--cchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++|||||+|.||++++++|++.|++ .|+++++..... +.+.... ...++.++.+|++|.+.+.++++.. .
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~-----~ 73 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDIS--ESNRYNFEHADICDSAEITRIFEQY-----Q 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhhh--hcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence 5899999999999999999999998 456566533221 1122221 1358999999999999999888765 7
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD- 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~- 186 (231)
+|+|||+|+... ...+.++..+.+++|+.++.++++.+.......... .....++|++||....-..
T Consensus 74 ~d~VihlAa~~~-----------~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~-~~~~~~~i~~SS~~vyg~~~ 141 (361)
T d1kewa_ 74 PDAVMHLAAESH-----------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGED-KKNNFRFHHISTDEVYGDLP 141 (361)
T ss_dssp CSEEEECCSCCC-----------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH-HHHHCEEEEEEEGGGGCCCC
T ss_pred CCEEEECccccc-----------hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCceEEEEeccceeeCCCc
Confidence 999999998532 223345556789999999999999987765332100 0001289999886532100
Q ss_pred -----------------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 -----------------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 -----------------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+..+...|+.+|.+.+.+++.++..+
T Consensus 142 ~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~ 185 (361)
T d1kewa_ 142 HPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 185 (361)
T ss_dssp CGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 011223469999999999999988765
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=2.8e-15 Score=123.96 Aligned_cols=159 Identities=16% Similarity=0.132 Sum_probs=112.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCc-----cchhhh-hhcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----TGLLDL-KNRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~-----~~~~~~-~~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
|++|||||+|.||.+++++|+++|++ |+.++|..... +.+... ......++.++.+|++|.+.+.+++++.
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~--V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYE--VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-
Confidence 44599999999999999999999997 88888864332 222111 1122357899999999999999998876
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
.++++++.++... .....+.....+++|+.++.++++++...-.... .++|++||..
T Consensus 79 ----~~~~v~~~~a~~~-----------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~-------~~~i~~SS~~- 135 (347)
T d1t2aa_ 79 ----KPTEIYNLGAQSH-----------VKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS-------VKFYQASTSE- 135 (347)
T ss_dssp ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTT-------CEEEEEEEGG-
T ss_pred ----ccceeeeeeeccc-----------cchhhccchhhhhhHHHHHHHHHHHHHHcCCCCC-------cEEEEecchh-
Confidence 6788888887542 2233344556789999999999998866543222 2788888754
Q ss_pred ccCC---------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 183 SIGD---------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 183 ~~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+|. .+..+...|+.+|.+.+.+++.++..+
T Consensus 136 vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~ 175 (347)
T d1t2aa_ 136 LYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 175 (347)
T ss_dssp GTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3321 122234579999999999999887664
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.64 E-value=4.2e-15 Score=123.23 Aligned_cols=160 Identities=14% Similarity=0.210 Sum_probs=119.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++||++|||||+|.||.++++.|+++|++ |+.++|+......+.+.. .....+.++.+|++|++.+.++++..
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~---- 78 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF---- 78 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc----
Confidence 68999999999999999999999999997 888899877666543332 22457999999999999998888775
Q ss_pred CCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC
Q 026924 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185 (231)
Q Consensus 106 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~ 185 (231)
.+|+++|.++... ...+.+..+..+.+|+.++..+++++...-.. ..++..|+......
T Consensus 79 -~~~~v~~~aa~~~-----------~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~---------~~~~~~s~~~~~~~ 137 (356)
T d1rkxa_ 79 -QPEIVFHMAAQPL-----------VRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV---------KAVVNITSDKCYDN 137 (356)
T ss_dssp -CCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC---------CEEEEECCGGGBCC
T ss_pred -hhhhhhhhhcccc-----------ccccccCCccccccccccchhhhhhhhccccc---------cccccccccccccc
Confidence 7899999998542 23334556778999999999999988643221 14555554332221
Q ss_pred C---------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 186 D---------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 186 ~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
. .+..+...|+.+|.+.+.+++.++.++
T Consensus 138 ~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~ 174 (356)
T d1rkxa_ 138 KEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 174 (356)
T ss_dssp CCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCccccccccchhhhhHHhhhc
Confidence 1 122245579999999999998888765
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.63 E-value=4.1e-15 Score=121.66 Aligned_cols=155 Identities=14% Similarity=0.083 Sum_probs=112.9
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
|+||||||+|.||++++++|+++|++ |+.++|....... +..+. ...++.++.+|++|.+.+.+.+...
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~--V~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----- 71 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYR--VHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA----- 71 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCCcccHHHHHHhc--ccCCcEEEEccccChHHhhhhhccc-----
Confidence 68999999999999999999999997 8888887544332 22221 2357899999999999998888875
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
..++++++++... .....++..+.+..|+.++..+++++...-.. .++++.||.. ..+.
T Consensus 72 ~~~~~~~~a~~~~-----------~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---------~~~i~~Ss~~-~~~~ 130 (321)
T d1rpna_ 72 QPQEVYNLAAQSF-----------VGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---------TRFYQASTSE-MFGL 130 (321)
T ss_dssp CCSEEEECCSCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---------SEEEEEEEGG-GGCS
T ss_pred ccccccccccccc-----------ccccccchHHHHhhhhhchHHHHHHHHHhCCC---------cccccccchh-hcCc
Confidence 6788888876532 22233445678999999999999988654322 1666666543 3321
Q ss_pred ---------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 ---------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 ---------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+......|+.+|.+.+.+++.++.+.
T Consensus 131 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 166 (321)
T d1rpna_ 131 IQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF 166 (321)
T ss_dssp CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc
Confidence 122345689999999999999988765
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.62 E-value=6.7e-15 Score=121.19 Aligned_cols=162 Identities=15% Similarity=0.070 Sum_probs=112.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-----Cccchhhhhh-cCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-----GATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-----~~~~~~~~~~-~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
|++|||||+|.||++++++|+++|++ |+.++|... ..+.+..... .....+.++.+|+++.+++.+.++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~- 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYE--VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI- 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCE--EEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-
Confidence 79999999999999999999999997 888888533 2222222111 12347889999999999999888865
Q ss_pred HHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcc
Q 026924 103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~ 182 (231)
++|+|||+|+... .....+.....+..|..++..+..++.......... .+++..||...
T Consensus 79 ----~~D~Vih~Aa~~~-----------~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ss~~~ 138 (339)
T d1n7ha_ 79 ----KPDEVYNLAAQSH-----------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-----VKYYQAGSSEM 138 (339)
T ss_dssp ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCC-----CEEEEEEEGGG
T ss_pred ----ccchhhhcccccc-----------ccccccCccccccccccccchhhhhhhhcccccccc-----eeeeeccccee
Confidence 8999999998642 223334556788999999999988886544332211 14555554432
Q ss_pred ccC-------CCCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 183 SIG-------DNRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 183 ~~~-------~~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
... ..+......|+.+|.+.+.++..+....
T Consensus 139 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 176 (339)
T d1n7ha_ 139 FGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176 (339)
T ss_dssp GTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh
Confidence 111 1122345689999999999998887764
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.59 E-value=2.9e-15 Score=124.08 Aligned_cols=168 Identities=14% Similarity=0.058 Sum_probs=115.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh--hcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK--NRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~--~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+||+||||||+|.||.+++++|+++|++ |+.+.|+....+.+.... .........+..|+++.+++.+++
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~--V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------ 81 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI------ 81 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT------
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc------
Confidence 5899999999999999999999999997 888888765544443322 122334556778999998766544
Q ss_pred cCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCcccc
Q 026924 105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184 (231)
Q Consensus 105 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~ 184 (231)
...|+++|+++... .. ......+.+|+.++.++++.+...-. . .++|++||..+..
T Consensus 82 -~~~~~v~~~a~~~~-----------~~---~~~~~~~~~nv~gt~~ll~~~~~~~~---v------~~~i~~SS~~~~~ 137 (342)
T d1y1pa1 82 -KGAAGVAHIASVVS-----------FS---NKYDEVVTPAIGGTLNALRAAAATPS---V------KRFVLTSSTVSAL 137 (342)
T ss_dssp -TTCSEEEECCCCCS-----------CC---SCHHHHHHHHHHHHHHHHHHHHTCTT---C------CEEEEECCGGGTC
T ss_pred -ccchhhhhhccccc-----------cc---ccccccccchhhhHHHHHHhhhcccc---c------ccccccccceeec
Confidence 35799999998542 01 12235677899999999998765321 1 2889999865432
Q ss_pred CCC----------------------------CCCCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCC
Q 026924 185 GDN----------------------------RLGGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRH 228 (231)
Q Consensus 185 ~~~----------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~ 228 (231)
... +......|+.+|.+.+.+++.++++.. .+++++ +++|+.
T Consensus 138 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~-~i~p~~ 207 (342)
T d1y1pa1 138 IPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLN-AVLPNY 207 (342)
T ss_dssp CCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEE-EEEESE
T ss_pred cCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccc-eecccc
Confidence 211 111223699999999999998887654 345533 555553
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.58 E-value=2.7e-14 Score=117.08 Aligned_cols=156 Identities=13% Similarity=0.127 Sum_probs=110.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC--ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++|||||+|.||++++++|+++|++ |+.+++-... .+.+..+. ...++.++.+|+++.+++.++++.. +
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~--V~~id~~~~~~~~~~~~~~~--~~~~~~~i~~Di~~~~~l~~~~~~~-----~ 72 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLS--SLGNFEFVHGDIRNKNDVTRLITKY-----M 72 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSTTHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhHHHHhh--ccCCcEEEEcccCCHHHHHHHHHhc-----C
Confidence 5899999999999999999999997 7776643222 12122221 2468899999999999999888876 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|+|||+|+... .....++..+.+++|+.++.++++++...-.. +.++.+|.....+..
T Consensus 73 ~d~Vih~aa~~~-----------~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~----------~~i~~sS~~~~~~~~ 131 (338)
T d1orra_ 73 PDSCFHLAGQVA-----------MTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN----------CNIIYSSTNKVYGDL 131 (338)
T ss_dssp CSEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT----------CEEEEEEEGGGGTTC
T ss_pred CceEEeeccccc-----------ccccccChHHHHHHHHHHHHHHHHhhhccccc----------ccccccccccccccc
Confidence 899999998642 22333455678999999999999987654222 444444443332210
Q ss_pred -------------------------CCCCccchhhhHHHHHHHHHHhhhhccc
Q 026924 188 -------------------------RLGGWHSYRASKAALNHDKICVSGVWSK 215 (231)
Q Consensus 188 -------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~ 215 (231)
+......|+.+|...+.+.......+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~ 184 (338)
T d1orra_ 132 EQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL 184 (338)
T ss_dssp TTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCc
Confidence 1123457999999999999888877643
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=2.5e-14 Score=116.71 Aligned_cols=139 Identities=11% Similarity=-0.053 Sum_probs=101.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
.|++|||||+|.||++++++|+++|+. +++.++.. .+|+.+.+.+.++++.- .
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~--vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~ 54 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDV--ELVLRTRD--------------------ELNLLDSRAVHDFFASE-----R 54 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTE--EEECCCTT--------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCE--EEEecCch--------------------hccccCHHHHHHHHhhc-----C
Confidence 478999999999999999999999996 55554322 16899999998887653 6
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~ 187 (231)
+|.++|+++... . .........+.+++|+.++.++++++...-.+ ++|++||.....+..
T Consensus 55 ~d~v~~~a~~~~-------~---~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~----------~~i~~SS~~vyg~~~ 114 (315)
T d1e6ua_ 55 IDQVYLAAAKVG-------G---IVANNTYPADFIYQNMMIESNIIHAAHQNDVN----------KLLFLGSSCIYPKLA 114 (315)
T ss_dssp CSEEEECCCCCC-------C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC----------EEEEECCGGGSCTTC
T ss_pred CCEEEEcchhcc-------c---cccchhhHHHHHHHHHHHHHHHHHHHHHcCCC----------EEEEECCceEcCCCC
Confidence 899999997542 1 12233444567889999999999988654222 899999876432110
Q ss_pred -------------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 188 -------------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 188 -------------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
+.+...+|+.+|.+.+.+++.+..+.
T Consensus 115 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 153 (315)
T d1e6ua_ 115 KQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 153 (315)
T ss_dssp CSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11223469999999999999987765
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.56 E-value=7.6e-14 Score=115.47 Aligned_cols=159 Identities=13% Similarity=0.114 Sum_probs=109.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|.||||||+|.||.+++++|+++|+.++|+..++...... ........+.++.++.+|++|.+.+..++. ..
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~-~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~ 74 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-KANLEAILGDRVELVVGDIADAELVDKLAA-------KA 74 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc-HHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence 6799999999999999999999999866666554222111 111112235689999999999988876643 46
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC--
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-- 186 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-- 186 (231)
+.++|.|+... ......+..+.+++|+.++.++++.+...-. +++++||... ++.
T Consensus 75 ~~v~~~a~~~~-----------~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-----------k~i~~ss~~v-yg~~~ 131 (346)
T d1oc2a_ 75 DAIVHYAAESH-----------NDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-----------RFHHVSTDEV-YGDLP 131 (346)
T ss_dssp SEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-----------EEEEEEEGGG-GCCBC
T ss_pred hhhhhhhhccc-----------ccchhhCcccceeeehHhHHhhhhhhccccc-----------cccccccceE-ecccC
Confidence 77888887542 1223344567899999999999988754432 5666655432 110
Q ss_pred -------------------CCCCCccchhhhHHHHHHHHHHhhhhccccCCcee
Q 026924 187 -------------------NRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYM 221 (231)
Q Consensus 187 -------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~ 221 (231)
.+..+...|+.+|.+.+.+++.+.++. |++++
T Consensus 132 ~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ 182 (346)
T d1oc2a_ 132 LREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKAT 182 (346)
T ss_dssp CGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEE
T ss_pred ccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEE
Confidence 011123569999999999999887664 55533
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=6.2e-14 Score=115.88 Aligned_cols=156 Identities=16% Similarity=0.086 Sum_probs=111.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC------CCCccc-hhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN------PNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~------~~~~~~-~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
|+||||||+|.||.+++++|++.|+. |+.+++. ...... ..........++.++.+|++|.+.+++++...
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~--V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYL--PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCC--EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 67899999999999999999999997 7777642 111111 22222223568999999999999998887763
Q ss_pred HHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCc
Q 026924 102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV 181 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~ 181 (231)
.+++++|.|+... ...+.+...+.+++|+.++.++++++...-.+ +++++||..
T Consensus 81 -----~~~~i~h~Aa~~~-----------~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~----------~~i~~ss~~ 134 (346)
T d1ek6a_ 81 -----SFMAVIHFAGLKA-----------VGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK----------NLVFSSSAT 134 (346)
T ss_dssp -----CEEEEEECCSCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC----------EEEEEEEGG
T ss_pred -----ccccccccccccC-----------cHhhHhCHHHHHHhhhcccccccchhhhcCcc----------cccccccce
Confidence 7899999998642 12334455678999999999999987543322 788877664
Q ss_pred cccCCC---------CCCCccchhhhHHHHHHHHHHhhhh
Q 026924 182 GSIGDN---------RLGGWHSYRASKAALNHDKICVSGV 212 (231)
Q Consensus 182 ~~~~~~---------~~~~~~~y~~sK~a~~~~~~~l~~e 212 (231)
...... ......+|+.+|.+.+..++.+++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~ 174 (346)
T d1ek6a_ 135 VYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA 174 (346)
T ss_dssp GGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccccccccCChHHHHHHHHHHHHHHHHHh
Confidence 332110 1223447999999999999887654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=1.4e-13 Score=113.44 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=105.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||++++++|+++|.. .|+.+++.......+.+ ..++.++.+|+++.+++.+.+.+ .+|
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~-~V~~ld~~~~~~~~~~~-----~~~~~~i~~Di~~~~~~~~~~~~------~~d 69 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVK------KCD 69 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHHH------HCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCcchhhhcc-----CCCeEEEECccCChHHHHHHHHh------CCC
Confidence 5899999999999999999999953 47877775543333221 35799999999988776543321 489
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC--
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-- 187 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-- 187 (231)
+|||+|+... .....+...+.+++|+.++.++++.+...-. +.++.||........
T Consensus 70 ~Vih~a~~~~-----------~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-----------~~~~~ss~~~~~~~~~~ 127 (342)
T d2blla1 70 VVLPLVAIAT-----------PIEYTRNPLRVFELDFEENLRIIRYCVKYRK-----------RIIFPSTSEVYGMCSDK 127 (342)
T ss_dssp EEEECBCCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-----------EEEEECCGGGGBTCCCS
T ss_pred cccccccccc-----------ccccccCCccccccccccccccccccccccc-----------ccccccccccccccccc
Confidence 9999999652 1123344456799999999999999754321 555666544322110
Q ss_pred -------------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 188 -------------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 188 -------------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.......|+.+|.+.+.+++.+.+..
T Consensus 128 ~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 166 (342)
T d2blla1 128 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 166 (342)
T ss_dssp SBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCcchhhhcccchhhhhhhhhccc
Confidence 01123569999999999999888765
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.53 E-value=1.5e-13 Score=114.22 Aligned_cols=152 Identities=13% Similarity=-0.062 Sum_probs=108.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++++|||||+|.||.+++++|+++|++ |+.+++....... .. .....+..+|+.+.+.+.+++ .
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~--V~~~d~~~~~~~~--~~----~~~~~~~~~D~~~~~~~~~~~-------~ 78 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHY--VIASDWKKNEHMT--ED----MFCDEFHLVDLRVMENCLKVT-------E 78 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCSSSC--GG----GTCSEEEECCTTSHHHHHHHH-------T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEeCCCccchh--hh----cccCcEEEeechhHHHHHHHh-------h
Confidence 6778999999999999999999999997 7777765433211 01 124467778998887665443 2
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
.+|.+||.|+... ......+.....+.+|+.++..+++++...-.+ ++|++||.......
T Consensus 79 ~~d~Vih~a~~~~----------~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk----------~~i~~SS~~~~~~~ 138 (363)
T d2c5aa1 79 GVDHVFNLAADMG----------GMGFIQSNHSVIMYNNTMISFNMIEAARINGIK----------RFFYASSACIYPEF 138 (363)
T ss_dssp TCSEEEECCCCCC----------CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS----------EEEEEEEGGGSCGG
T ss_pred cCCeEeecccccc----------cccccccccccccccccchhhHHHHhHHhhCcc----------cccccccccccccc
Confidence 6799999998642 122334455678899999999999988654332 89999986543211
Q ss_pred C---------------CCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 N---------------RLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 ~---------------~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
. +......|+.+|.+.+.+++.+..+.
T Consensus 139 ~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~ 180 (363)
T d2c5aa1 139 KQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF 180 (363)
T ss_dssp GSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 11224579999999999999888765
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.5e-13 Score=112.25 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=99.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC-CccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
|++|||||+|.||++++++|+++|++ |+.+++... ..+.+..... ..++.....|+.+. .+..
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~--~~~~d~~~~~~~~~------------~~~~ 65 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHE--VTVVDNFFTGRKRNVEHWIG--HENFELINHDVVEP------------LYIE 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGTGGGTT--CTTEEEEECCTTSC------------CCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCCcCCHHHHHHhcC--CCceEEEehHHHHH------------HHcC
Confidence 78999999999999999999999997 777776432 2222222111 23455555555332 1236
Q ss_pred ccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC-
Q 026924 108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD- 186 (231)
Q Consensus 108 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~- 186 (231)
+|+|||+|+... ......+..+.+++|+.++..+++++... + .++|++||... ++.
T Consensus 66 ~d~VihlAa~~~-----------~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-------~k~I~~SS~~v-y~~~ 122 (312)
T d2b69a1 66 VDQIYHLASPAS-----------PPNYMYNPIKTLKTNTIGTLNMLGLAKRV----G-------ARLLLASTSEV-YGDP 122 (312)
T ss_dssp CSEEEECCSCCS-----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHH----T-------CEEEEEEEGGG-GBSC
T ss_pred CCEEEECcccCC-----------chhHHhCHHHHHHHHHHHHHHHHHHHHHc----C-------CcEEEEEChhe-ecCC
Confidence 899999998542 11222345677899999999999987543 1 27888888543 221
Q ss_pred -------------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 -------------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 -------------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.+..+...|+.+|.+.+.+++.++.++
T Consensus 123 ~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 162 (312)
T d2b69a1 123 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE 162 (312)
T ss_dssp SSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 012234579999999999999988775
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.51 E-value=2.5e-13 Score=112.02 Aligned_cols=157 Identities=14% Similarity=0.107 Sum_probs=111.0
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC-ccch---hhhh-hcCCCceeEEEecCCChHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGL---LDLK-NRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~-~~~~---~~~~-~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+-|++|||||+|.||++++++|.+.|++ |+.+++.... .+.+ .... .....++.++.+|..|.......
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~--- 88 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQK--VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA--- 88 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH---
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCE--EEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc---
Confidence 35689999999999999999999999997 8888864322 2211 1111 11134788999999988755422
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
....+.+++.+.... ...+.++....+++|+.++..+++++...-. .++|++||.
T Consensus 89 ----~~~~~~v~~~~a~~~-----------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~----------~~~i~~SS~ 143 (341)
T d1sb8a_ 89 ----CAGVDYVLHQAALGS-----------VPRSINDPITSNATNIDGFLNMLIAARDAKV----------QSFTYAASS 143 (341)
T ss_dssp ----HTTCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC----------SEEEEEEEG
T ss_pred ----ccccccccccccccc-----------ccccccCccchhheeehhHHHHHHHHHhcCC----------ceEEEcccc
Confidence 236788888876432 2335566778899999999999998864422 189999886
Q ss_pred ccccCC---------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 181 VGSIGD---------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 181 ~~~~~~---------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.. ++. .+......|+.+|.+.+.+++.+++..
T Consensus 144 ~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 184 (341)
T d1sb8a_ 144 ST-YGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY 184 (341)
T ss_dssp GG-GTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ee-eCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh
Confidence 53 221 122234689999999999999988665
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.50 E-value=4.5e-13 Score=112.24 Aligned_cols=159 Identities=14% Similarity=0.073 Sum_probs=108.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeec---CC------CCccchhhhhh--------cCCCceeEEEecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCR---NP------NGATGLLDLKN--------RFPERLDVLQLDLT 89 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r---~~------~~~~~~~~~~~--------~~~~~v~~~~~Dls 89 (231)
+++||||||+|.||++++++|++ .|++ |+++|+ +. +..+....... .....+.++.+|++
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~--V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 79 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS--VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE--EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCE--EEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc
Confidence 45799999999999999999986 6786 777764 11 11111111111 11346888999999
Q ss_pred ChHHHHHHHHHHHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCccc
Q 026924 90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER 169 (231)
Q Consensus 90 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~ 169 (231)
|.+.++++++.. .++|+|+|.|+... .....+.....++.|+.++..+++++...-.+
T Consensus 80 d~~~l~~~~~~~----~~~d~ViH~Aa~~~-----------~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~------- 137 (383)
T d1gy8a_ 80 NEDFLNGVFTRH----GPIDAVVHMCAFLA-----------VGESVRDPLKYYDNNVVGILRLLQAMLLHKCD------- 137 (383)
T ss_dssp CHHHHHHHHHHS----CCCCEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-------
T ss_pred CHHHhhhhhhcc----ceeehhhccccccc-----------ccccccccccccccccccccccchhhhccCCc-------
Confidence 999988877654 57899999998642 22333445567889999999999988754332
Q ss_pred CceEEEEeccCccccCC---------------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 170 DVAVVANLSARVGSIGD---------------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 170 ~~~~iv~iss~~~~~~~---------------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
.++++++....... .+..+...|+.+|.+.+.+++.+...+
T Consensus 138 ---~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 193 (383)
T d1gy8a_ 138 ---KIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY 193 (383)
T ss_dssp ---EEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh
Confidence 56665554322110 112234679999999999999887654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=5.7e-13 Score=102.31 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=98.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
..|+++||||+|.||++++++|+++|++ |.+..|+.++.... ....+.++.+|++|.+++.++++
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~--V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~------- 66 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYE--VTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA------- 66 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------
Confidence 3468999999999999999999999997 88888987654432 13468889999999988766654
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
..|+||+++|... .... ...+..++.++++++ ++.+.. ++|++||.......
T Consensus 67 ~~d~vi~~~g~~~-------~~~~-----------~~~~~~~~~~l~~aa----~~~~v~------r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 67 GQDAVIVLLGTRN-------DLSP-----------TTVMSEGARNIVAAM----KAHGVD------KVVACTSAFLLWDP 118 (205)
T ss_dssp TCSEEEECCCCTT-------CCSC-----------CCHHHHHHHHHHHHH----HHHTCC------EEEEECCGGGTSCT
T ss_pred CCCEEEEEeccCC-------chhh-----------hhhhHHHHHHHHHHH----HhcCCC------eEEEEeeeeccCCC
Confidence 5799999998642 1111 122334454555544 333322 89999886544331
Q ss_pred CCC-CCccchhhhHHHHHHHHHHhhhhccccCCceeeeccCCCC
Q 026924 187 NRL-GGWHSYRASKAALNHDKICVSGVWSKEGSSYMYSVASRHC 229 (231)
Q Consensus 187 ~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~~~v~pg~~ 229 (231)
... +....|...|.+.+.+.+ ..|++.. .|.||.+
T Consensus 119 ~~~~~~~~~~~~~~~~~e~~l~-------~~~~~~t-iirp~~~ 154 (205)
T d1hdoa_ 119 TKVPPRLQAVTDDHIRMHKVLR-------ESGLKYV-AVMPPHI 154 (205)
T ss_dssp TCSCGGGHHHHHHHHHHHHHHH-------HTCSEEE-EECCSEE
T ss_pred ccccccccccchHHHHHHHHHH-------hcCCceE-EEeccee
Confidence 111 222345666666665443 4577754 6677653
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.47 E-value=1.2e-12 Score=107.11 Aligned_cols=154 Identities=17% Similarity=0.095 Sum_probs=106.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCcc----EEEEeecCCCC--ccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKG----CVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~----~vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|||||+|.||++++++|+++|+.+ .++..+..... ...+... ....++.++..|.++.......
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~------ 73 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV--DADPRLRFVHGDIRDAGLLARE------ 73 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG--TTCTTEEEEECCTTCHHHHHHH------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh--hcCCCeEEEEeccccchhhhcc------
Confidence 58999999999999999999999852 13333332211 1112221 2246899999999998765432
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
...+|.++|+|+... .........+.+++|+.++..+++++...-. .++|++||....
T Consensus 74 -~~~~d~vi~~a~~~~-----------~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~----------~~~I~~Ss~~~y 131 (322)
T d1r6da_ 74 -LRGVDAIVHFAAESH-----------VDRSIAGASVFTETNVQGTQTLLQCAVDAGV----------GRVVHVSTNQVY 131 (322)
T ss_dssp -TTTCCEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC----------CEEEEEEEGGGG
T ss_pred -ccccceEEeeccccc-----------ccccccchHHHhhhhHHHHHHHHHHHHHcCC----------ceEEEeecceee
Confidence 347899999998542 2334455567789999999999999864322 189998886533
Q ss_pred cCC--------CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 184 IGD--------NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 184 ~~~--------~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
... .+..+...|+.+|.+.+.+++.++++.
T Consensus 132 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 169 (322)
T d1r6da_ 132 GSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169 (322)
T ss_dssp CCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 211 112234579999999999999998765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=4.8e-13 Score=104.73 Aligned_cols=147 Identities=12% Similarity=-0.008 Sum_probs=103.9
Q ss_pred cccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 21 ~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
.+..++++|++|||||+|.||++++++|+++|.-..|++.+|++...... ....+....+|+.+.+++
T Consensus 7 ~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~~~~i~~~~~D~~~~~~~------ 74 (232)
T d2bkaa1 7 REDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------AYKNVNQEVVDFEKLDDY------ 74 (232)
T ss_dssp HHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------GGGGCEEEECCGGGGGGG------
T ss_pred HHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------ccceeeeeeecccccccc------
Confidence 34456789999999999999999999999999622588889976543321 123566666787766543
Q ss_pred HHHHcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccC
Q 026924 101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR 180 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~ 180 (231)
.+.+...|++||++|.. ......++..++|+..+..+++.+...- . .++|.+|+.
T Consensus 75 -~~~~~~~d~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~a~~~~----v------~~fi~~Ss~ 129 (232)
T d2bkaa1 75 -ASAFQGHDVGFCCLGTT--------------RGKAGAEGFVRVDRDYVLKSAELAKAGG----C------KHFNLLSSK 129 (232)
T ss_dssp -GGGGSSCSEEEECCCCC--------------HHHHHHHHHHHHHTHHHHHHHHHHHHTT----C------CEEEEECCT
T ss_pred -ccccccccccccccccc--------------ccccchhhhhhhcccccceeeecccccC----c------cccccCCcc
Confidence 33445789999999843 1223345567889999999988875432 2 289999987
Q ss_pred ccccCCCCCCCccchhhhHHHHHHHHHHh
Q 026924 181 VGSIGDNRLGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 181 ~~~~~~~~~~~~~~y~~sK~a~~~~~~~l 209 (231)
.... .....|+.+|...+..++.+
T Consensus 130 ~~~~-----~~~~~Y~~~K~~~E~~l~~~ 153 (232)
T d2bkaa1 130 GADK-----SSNFLYLQVKGEVEAKVEEL 153 (232)
T ss_dssp TCCT-----TCSSHHHHHHHHHHHHHHTT
T ss_pred cccc-----CccchhHHHHHHhhhccccc
Confidence 6432 23357999999998877654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.36 E-value=5e-12 Score=98.05 Aligned_cols=131 Identities=18% Similarity=0.108 Sum_probs=88.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++||||||+|.||++++++|+++|+++.|+...|++...+ ....++.++.+|+++.+++.++++ .+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~ 69 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI 69 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence 5899999999999999999999998756666777654322 224578899999999988766553 57
Q ss_pred cEEEEccccCCCCCCCC--CCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 109 NLLINASGILSIPNVLQ--PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
|.+||+++......... ............+.....+|+.++..++......... .....++....
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~s~~~~~ 136 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK----------HIVVVGSMGGT 136 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS----------EEEEEEETTTT
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccccc----------ccccccccccC
Confidence 99999998653111100 0111122233345566788888988887776544332 66666665433
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.25 E-value=5.3e-11 Score=95.23 Aligned_cols=135 Identities=17% Similarity=0.129 Sum_probs=95.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++|||||+|.||.++++.|.+.|. ++.++++... +..|++|.+.++++++.. ++|
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~---~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D 56 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN---LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPD 56 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE---EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC---EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence 599999999999999999999886 4444444321 236999999999888776 689
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC---
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--- 186 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--- 186 (231)
+|||+||... .+.+.+..+..++.|+.++..+.+++...- .+++++||.......
T Consensus 57 ~Vih~Aa~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~~~ss~~~~~~~~~~ 114 (298)
T d1n2sa_ 57 VIVNAAAHTA-----------VDKAESEPELAQLLNATSVEAIAKAANETG-----------AWVVHYSTDYVFPGTGDI 114 (298)
T ss_dssp EEEECCCCCC-----------HHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-----------CEEEEEEEGGGSCCCTTC
T ss_pred EEEEeccccc-----------ccccccCccccccccccccccchhhhhccc-----------cccccccccccccCCCCC
Confidence 9999998642 122333445678999999999988874321 267777766433221
Q ss_pred -----CCCCCccchhhhHHHHHHHHHHhhh
Q 026924 187 -----NRLGGWHSYRASKAALNHDKICVSG 211 (231)
Q Consensus 187 -----~~~~~~~~y~~sK~a~~~~~~~l~~ 211 (231)
.+......|+.+|.+.+.+.+....
T Consensus 115 ~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~ 144 (298)
T d1n2sa_ 115 PWQETDATSPLNVYGKTKLAGEKALQDNCP 144 (298)
T ss_dssp CBCTTSCCCCSSHHHHHHHHHHHHHHHHCS
T ss_pred CCccccccCCCchHhhhhhhhhhhHHhhhc
Confidence 1122345799999999888766443
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.20 E-value=1.7e-10 Score=91.64 Aligned_cols=132 Identities=23% Similarity=0.207 Sum_probs=93.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
+++|||||+|.||.+++++|.++|++ |+..+|++ +|++|.++++++++.. ++
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~--Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~ 53 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVE--VIPTDVQD---------------------LDITNVLAVNKFFNEK-----KP 53 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEE--EEEECTTT---------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE--EEEeechh---------------------ccCCCHHHHHHHHHHc-----CC
Confidence 35999999999999999999999997 88887753 5899999999888865 78
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccC---
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--- 185 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~--- 185 (231)
|+|||+++... .+......+..+..|+.....+......... .++..||......
T Consensus 54 d~vih~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----------~~~~~ss~~v~~~~~~ 111 (281)
T d1vl0a_ 54 NVVINCAAHTA-----------VDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-----------EIVQISTDYVFDGEAK 111 (281)
T ss_dssp SEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-----------EEEEEEEGGGSCSCCS
T ss_pred CEEEeeccccc-----------cccccccchhhcccccccccccccccccccc-----------cccccccceeeecccc
Confidence 99999998542 2223334456677888877777776644322 5555555432211
Q ss_pred -----CCCCCCccchhhhHHHHHHHHHHhh
Q 026924 186 -----DNRLGGWHSYRASKAALNHDKICVS 210 (231)
Q Consensus 186 -----~~~~~~~~~y~~sK~a~~~~~~~l~ 210 (231)
..+......|+.+|.+.+.+++...
T Consensus 112 ~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~ 141 (281)
T d1vl0a_ 112 EPITEFDEVNPQSAYGKTKLEGENFVKALN 141 (281)
T ss_dssp SCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccchhhhhhhhhHHHHHHHHhC
Confidence 1122345579999999888876543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.15 E-value=1.9e-10 Score=88.13 Aligned_cols=134 Identities=19% Similarity=0.113 Sum_probs=88.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|++|||||+|.||++++++|+++|+.+.|+...|+..... .+ +..+..|..++ . ....+.+
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----------~~---~~~~~~d~~~~---~---~~~~~~~ 63 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----------PR---LDNPVGPLAEL---L---PQLDGSI 63 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----------TT---EECCBSCHHHH---G---GGCCSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----------cc---ccccccchhhh---h---hccccch
Confidence 7899999999999999999999998545777776543211 11 12333333322 1 1233578
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCCC
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~ 188 (231)
|.+|+++|... . ....-++..+.|+.++..+++.+... +. .+++++|+..+.
T Consensus 64 d~vi~~~g~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~a~~~----~v------~~~i~~Ss~~~~----- 115 (212)
T d2a35a1 64 DTAFCCLGTTI-----------K--EAGSEEAFRAVDFDLPLAVGKRALEM----GA------RHYLVVSALGAD----- 115 (212)
T ss_dssp SEEEECCCCCH-----------H--HHSSHHHHHHHHTHHHHHHHHHHHHT----TC------CEEEEECCTTCC-----
T ss_pred heeeeeeeeec-----------c--ccccccccccchhhhhhhcccccccc----cc------cccccccccccc-----
Confidence 99999998541 0 11122456788999999998887532 22 288999986543
Q ss_pred CCCccchhhhHHHHHHHHHHh
Q 026924 189 LGGWHSYRASKAALNHDKICV 209 (231)
Q Consensus 189 ~~~~~~y~~sK~a~~~~~~~l 209 (231)
......|..+|...+.+++.+
T Consensus 116 ~~~~~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 116 AKSSIFYNRVKGELEQALQEQ 136 (212)
T ss_dssp TTCSSHHHHHHHHHHHHHTTS
T ss_pred cccccchhHHHHHHhhhcccc
Confidence 233457999999988777543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.03 E-value=1.9e-09 Score=86.30 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=60.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++|||||+|.||++++++|+++|++ |++..|+...... ..........++.++.+|+.+.+.+.+.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~--V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~------- 74 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHP--TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------- 74 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------
Confidence 45999999999999999999999997 7777887654433 112222224578899999999987765543
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
..+.++++++..
T Consensus 75 ~~~~~~~~~~~~ 86 (312)
T d1qyda_ 75 QVDVVISALAGG 86 (312)
T ss_dssp TCSEEEECCCCS
T ss_pred Ccchhhhhhhhc
Confidence 568888888643
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.97 E-value=3.4e-14 Score=107.84 Aligned_cols=44 Identities=14% Similarity=0.162 Sum_probs=37.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN 75 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~ 75 (231)
++.|+||+|+||+++|++|++.|++ |++.+|++++++.+.+.+.
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~--V~l~~R~~e~~~~l~~~i~ 45 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHE--IVVGSRREEKAEAKAAEYR 45 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSHHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHH
Confidence 4778888899999999999999997 8888999888777665544
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=5.8e-09 Score=83.24 Aligned_cols=149 Identities=14% Similarity=0.051 Sum_probs=88.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH--HcCCc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KYGSL 108 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~--~~g~i 108 (231)
+|||||+|.||.+++++|+++|++ .|+.+++-... ....... ..++.+......+.+.... .+..+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~-~V~~~d~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDG-TKFVNLV----------DLNIADYMDKEDFLIQIMAGEEFGDV 69 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCC-CEEEEECCSSG-GGGHHHH----------TSCCSEEEEHHHHHHHHHTTCCCSSC
T ss_pred EEEecCccHHHHHHHHHHHhCCCC-eEEEEECCCCc-chhhccc----------ccchhhhccchHHHHHHhhhhcccch
Confidence 799999999999999999999975 36666542221 1111111 1223222233333444433 34678
Q ss_pred cEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCCC-
Q 026924 109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN- 187 (231)
Q Consensus 109 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~- 187 (231)
++++|.|+... . .. ...+...+.|+.++..+++.+...-. +++..+|.....+..
T Consensus 70 ~~i~~~aa~~~-------~---~~---~~~~~~~~~~~~~~~~~l~~~~~~~i-----------~~v~~ss~~~~~~~~~ 125 (307)
T d1eq2a_ 70 EAIFHEGACSS-------T---TE---WDGKYMMDNNYQYSKELLHYCLEREI-----------PFLYASSAATYGGRTS 125 (307)
T ss_dssp CEEEECCSCCC-------T---TC---CCHHHHHHHTHHHHHHHHHHHHHHTC-----------CEEEEEEGGGGTTCCS
T ss_pred hhhhhhccccc-------c---cc---cccccccccccccccccccccccccc-----------cccccccccccccccc
Confidence 99999887432 0 11 12234567777888877776654322 344444443333221
Q ss_pred -------CCCCccchhhhHHHHHHHHHHhhhhccc
Q 026924 188 -------RLGGWHSYRASKAALNHDKICVSGVWSK 215 (231)
Q Consensus 188 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~ 215 (231)
+.+....|+.+|.+.+.+++.++.+...
T Consensus 126 ~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (307)
T d1eq2a_ 126 DFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS 160 (307)
T ss_dssp CBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSS
T ss_pred cccccccccccccccccccchhhhhcccccccccc
Confidence 1234567999999999999998877643
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.94 E-value=7.2e-09 Score=84.99 Aligned_cols=142 Identities=11% Similarity=-0.058 Sum_probs=88.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+.|++|||||+|.||.+++++|+++|++ |.+..|+..+... ... ....++..+.+|+.|..++. + +.+.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~--V~~l~R~~~~~~~-~~~--~~~~~v~~~~gD~~d~~~~~---~---~a~~ 70 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHH--VRAQVHSLKGLIA-EEL--QAIPNVTLFQGPLLNNVPLM---D---TLFE 70 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCSCSHHH-HHH--HTSTTEEEEESCCTTCHHHH---H---HHHT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCe--EEEEECCcchhhh-hhh--cccCCCEEEEeeCCCcHHHH---H---HHhc
Confidence 4689999999999999999999999998 7778898765432 111 11347889999999876532 2 2234
Q ss_pred CccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccccCC
Q 026924 107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186 (231)
Q Consensus 107 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~ 186 (231)
..|.++.+..... ..++....++++++... +. .+++..||.......
T Consensus 71 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa~~a----gv------~~~v~~Ss~~~~~~~ 117 (350)
T d1xgka_ 71 GAHLAFINTTSQA-----------------------GDEIAIGKDLADAAKRA----GT------IQHYIYSSMPDHSLY 117 (350)
T ss_dssp TCSEEEECCCSTT-----------------------SCHHHHHHHHHHHHHHH----SC------CSEEEEEECCCGGGT
T ss_pred CCceEEeeccccc-----------------------chhhhhhhHHHHHHHHh----CC------CceEEEeeccccccC
Confidence 6777776654221 11222333444554321 11 155666665543321
Q ss_pred CCCCCccchhhhHHHHHHHHHHhhhhc
Q 026924 187 NRLGGWHSYRASKAALNHDKICVSGVW 213 (231)
Q Consensus 187 ~~~~~~~~y~~sK~a~~~~~~~l~~e~ 213 (231)
+......|..+|...+.+.+....++
T Consensus 118 -~~~~~~~~~~~k~~~~~~~~~~~~~~ 143 (350)
T d1xgka_ 118 -GPWPAVPMWAPKFTVENYVRQLGLPS 143 (350)
T ss_dssp -SSCCCCTTTHHHHHHHHHHHTSSSCE
T ss_pred -CcccchhhhhhHHHHHHHHHhhccCc
Confidence 12334567888988888877665443
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=98.88 E-value=2.5e-08 Score=79.13 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=60.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh---hhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL---DLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~---~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.|++|||||+|.||++++++|++.|++ |++.+|+........ .........+.++.+|+.+.....+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHP--TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK----- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-----
Confidence 467999999999999999999999998 888888765543321 1112224568889999999987665554
Q ss_pred cCCccEEEEcccc
Q 026924 105 YGSLNLLINASGI 117 (231)
Q Consensus 105 ~g~id~lv~~ag~ 117 (231)
..+.++++++.
T Consensus 76 --~~~~vi~~~~~ 86 (307)
T d1qyca_ 76 --NVDVVISTVGS 86 (307)
T ss_dssp --TCSEEEECCCG
T ss_pred --hceeeeecccc
Confidence 46888888874
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=4.7e-06 Score=61.69 Aligned_cols=85 Identities=19% Similarity=0.131 Sum_probs=64.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
++++|++||.|+ ||.|++++..|++.|.+ .+.+.+|+.+..+.+..+.+..+ ........|+.+.+++....
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~-~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 88 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLK-EIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL---- 88 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH----
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCc-eEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh----
Confidence 568999999999 58999999999999998 79999999888776544433221 23445567888887654333
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
...|++||+....
T Consensus 89 ---~~~diiIN~Tp~G 101 (182)
T d1vi2a1 89 ---ASADILTNGTKVG 101 (182)
T ss_dssp ---HTCSEEEECSSTT
T ss_pred ---cccceeccccCCc
Confidence 3679999998754
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.85 E-value=8.1e-06 Score=60.27 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=54.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+||+|++|.+.+......|++ |+.+.+++++.+.+++ .+.+.. .|-++++..+...+.. ...
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~--vi~~~~~~~~~~~~~~----~Ga~~v---i~~~~~~~~~~~~~~~--~~~ 97 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKIAYLKQ----IGFDAA---FNYKTVNSLEEALKKA--SPD 97 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----TTCSEE---EETTSCSCHHHHHHHH--CTT
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCE--EEEeCCCHHHHHHHHh----hhhhhh---cccccccHHHHHHHHh--hcC
Confidence 5899999999999999999999999997 8888887655443333 233222 3445554444443332 224
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 98 Gvd~v~D~vG 107 (182)
T d1v3va2 98 GYDCYFDNVG 107 (182)
T ss_dssp CEEEEEESSC
T ss_pred CCceeEEecC
Confidence 6999999998
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=1.6e-05 Score=58.22 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=53.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+||+|++|...+..+...|++ |+.+++++++.+.+. +.|..- ..|.++++..+++.+... ..
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~--vi~~~~~~~~~~~~~----~~Ga~~---vi~~~~~~~~~~i~~~t~--~~ 96 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLK--ILGTAGTEEGQKIVL----QNGAHE---VFNHREVNYIDKIKKYVG--EK 96 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HTTCSE---EEETTSTTHHHHHHHHHC--TT
T ss_pred CCCEEEEEeccccccccccccccccCcc--ccccccccccccccc----ccCccc---ccccccccHHHHhhhhhc--cC
Confidence 5889999999999999999988889997 777777654433332 234321 247666654433333221 13
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.++|
T Consensus 97 g~d~v~d~~g 106 (174)
T d1yb5a2 97 GIDIIIEMLA 106 (174)
T ss_dssp CEEEEEESCH
T ss_pred CceEEeeccc
Confidence 5899999887
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.77 E-value=1.4e-05 Score=57.84 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=54.0
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++++++||.|+ |++|..+++.|...|++ .+.++.|+.++.+.+.... +..+ .+.+++.+ .
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~-~i~v~nRt~~ka~~l~~~~---~~~~-------~~~~~~~~-------~ 81 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR-AVLVANRTYERAVELARDL---GGEA-------VRFDELVD-------H 81 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHHH---TCEE-------CCGGGHHH-------H
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCc-EEEEEcCcHHHHHHHHHhh---hccc-------ccchhHHH-------H
Confidence 568999999998 99999999999999997 6889999877766654433 2221 12233332 2
Q ss_pred cCCccEEEEcccc
Q 026924 105 YGSLNLLINASGI 117 (231)
Q Consensus 105 ~g~id~lv~~ag~ 117 (231)
....|++|++.+.
T Consensus 82 l~~~Divi~atss 94 (159)
T d1gpja2 82 LARSDVVVSATAA 94 (159)
T ss_dssp HHTCSEEEECCSS
T ss_pred hccCCEEEEecCC
Confidence 2367999999874
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.72 E-value=3e-05 Score=56.95 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=51.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||+||+||.|...+......|++ |+.+.+++++.+.+.+. +.+... |-++. ..+....+ .-+
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~--Viat~~s~~k~~~~~~l----Ga~~vi---~~~~~--~~~~~~~~--~~~ 97 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYT--VEASTGKAAEHDYLRVL----GAKEVL---AREDV--MAERIRPL--DKQ 97 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCTTCHHHHHHT----TCSEEE---ECC-----------C--CSC
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCc--eEEecCchHHHHHHHhc----ccceee---ecchh--HHHHHHHh--hcc
Confidence 5789999999999999999888889997 88888888876655443 333221 22211 11111111 225
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
++|+++.+.|.
T Consensus 98 gvD~vid~vgg 108 (176)
T d1xa0a2 98 RWAAAVDPVGG 108 (176)
T ss_dssp CEEEEEECSTT
T ss_pred CcCEEEEcCCc
Confidence 79999999984
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.70 E-value=3.2e-05 Score=57.33 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=55.0
Q ss_pred CeEEEE-ecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH-Hc
Q 026924 28 GGVSLV-QGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-KY 105 (231)
Q Consensus 28 ~k~~LV-tGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~-~~ 105 (231)
|.+++| +||+|++|.+.+...-..|++ |+.+.++.+..++..+..++.|.+.... .|-.+..++.+.+.++.+ ..
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~--vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g 105 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFN--SISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSG 105 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCE--EEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCe--EEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhcc
Confidence 555555 799999999998888889997 8777787777666555555445433222 111122233344444443 34
Q ss_pred CCccEEEEccc
Q 026924 106 GSLNLLINASG 116 (231)
Q Consensus 106 g~id~lv~~ag 116 (231)
+++|+++.+.|
T Consensus 106 ~~vdvv~D~vg 116 (189)
T d1gu7a2 106 GEAKLALNCVG 116 (189)
T ss_dssp CCEEEEEESSC
T ss_pred CCceEEEECCC
Confidence 57999999987
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.66 E-value=2.1e-05 Score=57.60 Aligned_cols=79 Identities=19% Similarity=0.200 Sum_probs=56.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|...+......|++ |+.+++++++.+.++++ |.+ ...|-++++-.+++ .++- ...
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~--Vi~~~~s~~k~~~~~~l----Ga~---~vi~~~~~d~~~~v-~~~t-~g~ 96 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAK--LIGTVGTAQKAQSALKA----GAW---QVINYREEDLVERL-KEIT-GGK 96 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHH-HHHT-TTC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCe--EeecccchHHHHHHHhc----CCe---EEEECCCCCHHHHH-HHHh-CCC
Confidence 4789999999999999999999999996 99998988776655443 322 22476665433332 2221 224
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 97 g~d~v~d~~g 106 (179)
T d1qora2 97 KVRVVYDSVG 106 (179)
T ss_dssp CEEEEEECSC
T ss_pred CeEEEEeCcc
Confidence 6899999887
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.59 E-value=8.4e-05 Score=53.81 Aligned_cols=82 Identities=23% Similarity=0.235 Sum_probs=55.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.|.+++|+| +|++|...+..+...|++ |+++++++++.+.+.+. +.+.. +..|- ..++.....+++.+..|
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~--vi~v~~~~~r~~~a~~~----ga~~~-~~~~~-~~~~~~~~~~~~~~~~g 96 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAF--VVCTARSPRRLEVAKNC----GADVT-LVVDP-AKEEESSIIERIRSAIG 96 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHT----TCSEE-EECCT-TTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhccc--ccccchHHHHHHHHHHc----CCcEE-Eeccc-cccccchhhhhhhcccc
Confidence 477899997 689999999888889996 88899888765544432 33222 22222 22344455566666554
Q ss_pred -CccEEEEcccc
Q 026924 107 -SLNLLINASGI 117 (231)
Q Consensus 107 -~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 97 ~g~D~vid~~g~ 108 (170)
T d1e3ja2 97 DLPNVTIDCSGN 108 (170)
T ss_dssp SCCSEEEECSCC
T ss_pred cCCceeeecCCC
Confidence 68999999984
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.59 E-value=3.1e-05 Score=56.87 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=52.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|.++||+||+|++|...+..+...|++ ++.+.+++++.+.+. +.+.+. ..|-++++-. +++++..
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~--vi~~~~~~~~~~~l~----~~Ga~~---vi~~~~~~~~----~~v~~~t~ 91 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGAR--IYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFA----DEILELTD 91 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHH----TTCCSE---EEETTCSTHH----HHHHHHTT
T ss_pred CCCEEEEECCCCCcccccchhhcccccc--ceeeecccccccccc----cccccc---cccCCccCHH----HHHHHHhC
Confidence 4789999999999999999988889997 777777665443332 334331 1355554332 3343332
Q ss_pred -CCccEEEEccc
Q 026924 106 -GSLNLLINASG 116 (231)
Q Consensus 106 -g~id~lv~~ag 116 (231)
..+|+++.++|
T Consensus 92 ~~g~d~v~d~~g 103 (183)
T d1pqwa_ 92 GYGVDVVLNSLA 103 (183)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCEEEEEeccc
Confidence 36999999998
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=6.4e-05 Score=57.22 Aligned_cols=79 Identities=11% Similarity=0.167 Sum_probs=51.4
Q ss_pred cccCeEEEEecC----------------CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecC
Q 026924 25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88 (231)
Q Consensus 25 ~~~~k~~LVtGa----------------s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl 88 (231)
+|+|+.+|||+| ||..|.+||+.+.++|++ |.++....... .+..+..+ .+
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~--V~li~g~~~~~---------~p~~~~~~--~~ 69 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN--VTLVSGPVSLP---------TPPFVKRV--DV 69 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE--EEEEECSCCCC---------CCTTEEEE--EC
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCc--hhhhhcccccC---------cccccccc--ee
Confidence 688999999986 468999999999999998 44443322110 12233333 33
Q ss_pred CChHHHHHHHHHHHHHcCCccEEEEccccCC
Q 026924 89 TVESTIEASAKSIKEKYGSLNLLINASGILS 119 (231)
Q Consensus 89 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~ 119 (231)
...++. .+.+.+.+..-|++|++|....
T Consensus 70 ~t~~~m---~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 70 MTALEM---EAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp CSHHHH---HHHHHHHGGGCSEEEECCBCCS
T ss_pred hhhHHH---HHHHHhhhccceeEeeeechhh
Confidence 344444 4444445567799999998764
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.56 E-value=6.7e-05 Score=54.37 Aligned_cols=74 Identities=19% Similarity=0.215 Sum_probs=50.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+|.+||.|+ |.+|+.+|+.|+++|++ |++.+|+.+..+.+.+.. ........+..+.......+. .
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~--V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~ 67 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIK--VTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------K 67 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCE--EEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------c
Confidence 688999987 89999999999999997 999999988777654422 233344445555444433332 3
Q ss_pred ccEEEEcc
Q 026924 108 LNLLINAS 115 (231)
Q Consensus 108 id~lv~~a 115 (231)
.|.++...
T Consensus 68 ~~~~i~~~ 75 (182)
T d1e5qa1 68 HDLVISLI 75 (182)
T ss_dssp SSEEEECS
T ss_pred cceeEeec
Confidence 46666444
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.50 E-value=0.00014 Score=53.30 Aligned_cols=81 Identities=21% Similarity=0.238 Sum_probs=54.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc-
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY- 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~- 105 (231)
+|.++||+|+ |++|...+..+...|++ .|+++++++++.+.+++ .|... ..|.++. +..+..+++.+..
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~-~~~~~~~~i~~~~~ 97 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAE-NVIVIAGSPNRLKLAEE----IGADL---TLNRRET-SVEERRKAIMDITH 97 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBS-EEEEEESCHHHHHHHHH----TTCSE---EEETTTS-CHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-Cccchhheecccccccc-ccccccccccccccccc----ccceE---EEecccc-chHHHHHHHHHhhC
Confidence 5889999997 79999999999899996 69999998876654433 23322 1344332 2333334444432
Q ss_pred -CCccEEEEcccc
Q 026924 106 -GSLNLLINASGI 117 (231)
Q Consensus 106 -g~id~lv~~ag~ 117 (231)
..+|++|.++|.
T Consensus 98 ~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 98 GRGADFILEATGD 110 (182)
T ss_dssp TSCEEEEEECSSC
T ss_pred CCCceEEeecCCc
Confidence 258999999984
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=5.5e-05 Score=47.49 Aligned_cols=44 Identities=25% Similarity=0.268 Sum_probs=37.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
++.++||+||+||.|...+..+...|++ |+.+.+++++.+.+.+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~--Vi~~t~s~~k~~~~~~ 74 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQ--VVAVSGRESTHEYLKS 74 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCe--EEEEECCHHHHHHHHH
Confidence 5789999999999999999988889997 8888888877665543
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.46 E-value=0.00015 Score=52.62 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=50.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|+++||+||+|++|+..+..+...|++ |+.+++++++.+.+.+ .+.+.. .|..+. .+++. ...
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~--vi~~~~~~~~~~~~~~----lGa~~~---i~~~~~------~~~~~-~~~ 90 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLR--VLAAASRPEKLALPLA----LGAEEA---ATYAEV------PERAK-AWG 90 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSGGGSHHHHH----TTCSEE---EEGGGH------HHHHH-HTT
T ss_pred CCCEEEEEeccccchhhhhhhhcccccc--cccccccccccccccc----ccccee---eehhhh------hhhhh-ccc
Confidence 6889999999999999999888889996 8888887765554433 233211 233221 12222 235
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
.+|+++.+.|
T Consensus 91 g~D~v~d~~G 100 (171)
T d1iz0a2 91 GLDLVLEVRG 100 (171)
T ss_dssp SEEEEEECSC
T ss_pred cccccccccc
Confidence 7999998776
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.43 E-value=0.0001 Score=53.39 Aligned_cols=81 Identities=10% Similarity=0.118 Sum_probs=54.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|++|++|...+..+...|+. .|+++++++++.+.+.+. +.+ ...|.++++..++..+.. .-+
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~-~V~~~~~~~~~~~~~~~~----Ga~---~~i~~~~~~~~~~~~~~~--~~~ 96 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEIRRIT--ESK 96 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHT--TTS
T ss_pred CCCEEEEEeccccceeeeeecccccccc-cccccccchhhHHHHHHc----CCc---eeeccCCcCHHHHHHHHh--hcc
Confidence 4789999999999999999999989976 688888887655444332 332 123455544444333222 123
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 97 ~~d~vid~~g~ 107 (170)
T d1jvba2 97 GVDAVIDLNNS 107 (170)
T ss_dssp CEEEEEESCCC
T ss_pred cchhhhccccc
Confidence 58999999984
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=7.4e-05 Score=54.35 Aligned_cols=76 Identities=24% Similarity=0.167 Sum_probs=54.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++||.+||.|+ ||-+++++..|.+.|.+ |.+..|+.++.+.+.+.....+ .+.. .+..+. .
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~--i~I~nRt~~ka~~l~~~~~~~~-~~~~--~~~~~~------------~ 76 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSLDCA--VTITNRTVSRAEELAKLFAHTG-SIQA--LSMDEL------------E 76 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHTGGGS-SEEE--CCSGGG------------T
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhcccceE--EEeccchHHHHHHHHHHHhhcc-cccc--cccccc------------c
Confidence 567999999998 57899999999999996 8889999888777665544322 2221 222111 1
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|++||+....
T Consensus 77 ~~~~dliIN~Tp~G 90 (170)
T d1nyta1 77 GHEFDLIINATSSG 90 (170)
T ss_dssp TCCCSEEEECCSCG
T ss_pred ccccceeecccccC
Confidence 24689999998654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.32 E-value=0.00019 Score=52.17 Aligned_cols=79 Identities=18% Similarity=0.149 Sum_probs=52.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ |++|...+..+...|++ +|+++++++.+.+.+++. +.. .+ .|.++++ +.+.+.++. -+
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~-~v~~~~~~~~k~~~a~~~----Ga~-~~--i~~~~~~-~~~~i~~~t--~g 95 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLELAKQL----GAT-HV--INSKTQD-PVAAIKEIT--DG 95 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH----TCS-EE--EETTTSC-HHHHHHHHT--TS
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccc-eeeeeccHHHHHHHHHHc----CCe-EE--EeCCCcC-HHHHHHHHc--CC
Confidence 5789999987 89999999888889998 677777777555544332 321 12 3555543 333333332 25
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 96 g~D~vid~~G~ 106 (174)
T d1f8fa2 96 GVNFALESTGS 106 (174)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEEcCCc
Confidence 79999999984
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.28 E-value=0.00025 Score=51.74 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=54.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ ||+|...+..+...|+. .|+.++.++++++..++. +.+.. .|.++.+...+.+.+.. ..+
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~-~Vi~vd~~~~kl~~Ak~~----GA~~~---in~~~~~~~~~~~~~~~-~g~ 98 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGAS-RIIGIDLNKDKFEKAMAV----GATEC---ISPKDSTKPISEVLSEM-TGN 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHHH----TCSEE---ECGGGCSSCHHHHHHHH-HTS
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCc-eEEEecCcHHHHHHHHhc----CCcEE---ECccccchHHHHHHHHh-ccc
Confidence 5889999986 89999999999999986 799999999887755444 33222 23333222112222221 224
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.+.|.
T Consensus 99 G~d~vi~~~g~ 109 (176)
T d1d1ta2 99 NVGYTFEVIGH 109 (176)
T ss_dssp CCCEEEECSCC
T ss_pred cceEEEEeCCc
Confidence 69999999884
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00055 Score=49.42 Aligned_cols=81 Identities=21% Similarity=0.224 Sum_probs=54.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ |++|...+..+...|++ .|+++++++.+.+..++ .|.+. .+..+- ++.....+.+...+|
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~-~Vi~~d~~~~rl~~a~~----~Ga~~-~~~~~~---~~~~~~~~~~~~~~g 95 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVTDLSATRLSKAKE----IGADL-VLQISK---ESPQEIARKVEGQLG 95 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH----TTCSE-EEECSS---CCHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCc-eEEeccCCHHHHHHHHH----hCCcc-cccccc---cccccccccccccCC
Confidence 4778999987 89999999999899996 69999988766554333 23322 122222 233334444444444
Q ss_pred -CccEEEEcccc
Q 026924 107 -SLNLLINASGI 117 (231)
Q Consensus 107 -~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 96 ~g~Dvvid~~G~ 107 (171)
T d1pl8a2 96 CKPEVTIECTGA 107 (171)
T ss_dssp SCCSEEEECSCC
T ss_pred CCceEEEeccCC
Confidence 68999999984
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.25 E-value=9.8e-05 Score=53.91 Aligned_cols=80 Identities=14% Similarity=0.060 Sum_probs=52.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ |++|...+..+...|++ .|+++++++++.+...+. |.. ..+|.++++..++ +.++.+ ..
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~-~Vi~~d~~~~r~~~a~~l----Ga~---~~i~~~~~~~~~~-v~~~t~-g~ 95 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAG-RIIGVGSRPICVEAAKFY----GAT---DILNYKNGHIEDQ-VMKLTN-GK 95 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCS-CEEEECCCHHHHHHHHHH----TCS---EEECGGGSCHHHH-HHHHTT-TS
T ss_pred CCCEEEEEcC-Ccchhhhhhhhhccccc-ccccccchhhhHHHHHhh----Ccc---ccccccchhHHHH-HHHHhh-cc
Confidence 4788999986 89999999998889986 588999887665544332 321 1235544433322 222211 13
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 96 G~D~vid~~g~ 106 (174)
T d1jqba2 96 GVDRVIMAGGG 106 (174)
T ss_dssp CEEEEEECSSC
T ss_pred CcceEEEccCC
Confidence 59999999984
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.24 E-value=0.00019 Score=49.68 Aligned_cols=71 Identities=18% Similarity=0.171 Sum_probs=52.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
+++|.|+ |.+|+.+++.|.+.|+. |++++++++..+.+.+. .....+..|.++++.++++ .....|
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~--v~vid~d~~~~~~~~~~-----~~~~vi~Gd~~~~~~l~~~------~i~~a~ 67 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHD--IVLIDIDKDICKKASAE-----IDALVINGDCTKIKTLEDA------GIEDAD 67 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH-----CSSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCC--cceecCChhhhhhhhhh-----hhhhhccCcccchhhhhhc------Chhhhh
Confidence 6889998 89999999999999997 88889987665554332 1456788999999866533 223567
Q ss_pred EEEEc
Q 026924 110 LLINA 114 (231)
Q Consensus 110 ~lv~~ 114 (231)
.++..
T Consensus 68 ~vv~~ 72 (132)
T d1lssa_ 68 MYIAV 72 (132)
T ss_dssp EEEEC
T ss_pred hhccc
Confidence 77643
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.23 E-value=0.00047 Score=49.99 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=54.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|.++||.|+ +|+|...+..+...|+. .|+.+++++++.+...+. +..-. .|..+ ++.+.+..++.. .
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~-~Vi~~~~~~~k~~~a~~~----Ga~~~---i~~~~~~~~~~~~~~~~~--~ 96 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKAKEV----GATEC---VNPQDYKKPIQEVLTEMS--N 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHHT----TCSEE---ECGGGCSSCHHHHHHHHT--T
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCc-eEEeecCcHHHHHHHHHh----CCeeE---EecCCchhHHHHHHHHHh--c
Confidence 5889999999 68999999999999987 689999988776654433 22211 22222 233444444332 2
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|-+.|.
T Consensus 97 ~G~D~vid~~G~ 108 (176)
T d2jhfa2 97 GGVDFSFEVIGR 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEecCCc
Confidence 579999999984
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.13 E-value=0.00031 Score=51.03 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=54.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++|.++|.|+ ||-+++++..|.+.+. .|.+..|+.++.+.+.+...... .+.....|-. .
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~--~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~ 76 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQAQQ--NIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------P 76 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------C
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHcccCc--eeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------c
Confidence 467999999987 5779999999998665 59999999888887766554322 3434433311 1
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
....|++||+....
T Consensus 77 ~~~~diiIN~tp~g 90 (171)
T d1p77a1 77 LQTYDLVINATSAG 90 (171)
T ss_dssp CSCCSEEEECCCC-
T ss_pred ccccceeeeccccc
Confidence 35789999998765
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.11 E-value=0.00022 Score=51.65 Aligned_cols=45 Identities=18% Similarity=0.185 Sum_probs=37.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~ 73 (231)
++|.+||.|+ ||-+++++..|.+.|++ .|.+..|+.++.+.+.+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~-~I~I~nR~~~ka~~L~~~ 60 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFE-KLKIYARNVKTGQYLAAL 60 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCC-CEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCC-EEEEecccHHHHHHHHHh
Confidence 5778999988 68999999999999986 688999998776665543
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=97.09 E-value=0.00042 Score=50.38 Aligned_cols=80 Identities=14% Similarity=0.142 Sum_probs=53.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChH-HHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES-TIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~-~v~~~~~~~~~~~ 105 (231)
+|.++||.|+ |++|...+..+...|++ .|+.+++++++++..++. +..-. .|.++.+ .+.+..... ..
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~-~Vi~~d~~~~kl~~a~~l----Ga~~~---i~~~~~d~~~~~~~~~~--~~ 95 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKAIEL----GATEC---LNPKDYDKPIYEVICEK--TN 95 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHHT----TCSEE---ECGGGCSSCHHHHHHHH--TT
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCc-eeeccCChHHHHHHHHHc----CCcEE---EcCCCchhHHHHHHHHh--cC
Confidence 5889999986 89999999999999987 799999988776654432 32211 2333322 233222222 22
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+..|++|-++|.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 479999998884
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=97.04 E-value=0.00063 Score=49.42 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=53.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|.+++|.|+ |+||...+..+...|++ .|++++.++++.+..++. +... . .|..+ ++.++...+.. ..
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~-~Vi~~d~~~~r~~~a~~~----Ga~~-~--i~~~~~~~~~~~~~~~~--~~ 96 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGAS-RIIAIDINGEKFPKAKAL----GATD-C--LNPRELDKPVQDVITEL--TA 96 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHHT----TCSE-E--ECGGGCSSCHHHHHHHH--HT
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCc-eeeeeccchHHHHHHHHh----CCCc-c--cCCccchhhhhhhHhhh--hc
Confidence 5789999975 89999999999999997 688888888765543332 3221 1 23222 22333333333 23
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|-++|.
T Consensus 97 ~G~d~vie~~G~ 108 (174)
T d1e3ia2 97 GGVDYSLDCAGT 108 (174)
T ss_dssp SCBSEEEESSCC
T ss_pred CCCcEEEEeccc
Confidence 579999999984
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.03 E-value=0.00088 Score=48.34 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=53.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-hHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~-~~~v~~~~~~~~~~~ 105 (231)
+|.++||.|+ ||+|...+..+...|++ .|+.+++++++.+..++. |.+- + .|..+ .+.+.+.+++.. .
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~-~vi~~~~~~~k~~~ak~l----Ga~~-~--i~~~~~~~~~~~~~~~~~--~ 96 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGAS-RIIGVDINKDKFARAKEF----GATE-C--INPQDFSKPIQEVLIEMT--D 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHHH----TCSE-E--ECGGGCSSCHHHHHHHHT--T
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcC-ceEEEcccHHHHHHHHHh----CCcE-E--EeCCchhhHHHHHHHHHc--C
Confidence 5889999998 58999999999999987 678888877665544433 3221 1 23322 233444444432 2
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|++|.++|.
T Consensus 97 ~g~D~vid~~G~ 108 (176)
T d2fzwa2 97 GGVDYSFECIGN 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEeeecCCC
Confidence 479999999983
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.00036 Score=45.22 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=32.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
+++||+++|.|. |.-|+++|+.|.++|++ |.+.|.+..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~--v~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVT--PRVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCC--CEEEESSSS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCE--EEEeeCCcC
Confidence 578999999998 56899999999999998 787777543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.00 E-value=0.00026 Score=52.05 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=50.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+++|||+||+|++|...+...-..|++ +|+.+.++++....+.. ..+.+ ...|.++++ +.+.++++.. ..
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~-~vi~~~~~~e~~~~l~~---~~gad---~vi~~~~~~-~~~~~~~~~~--~G 100 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCS-RVVGICGTQEKCLFLTS---ELGFD---AAVNYKTGN-VAEQLREACP--GG 100 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCS-EEEEEESSHHHHHHHHH---HSCCS---EEEETTSSC-HHHHHHHHCT--TC
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCc-ceecccchHHHHhhhhh---cccce---EEeeccchh-HHHHHHHHhc--cC
Confidence 489999999999999998888779998 45555555444333322 22332 223555443 3333333321 35
Q ss_pred ccEEEEccc
Q 026924 108 LNLLINASG 116 (231)
Q Consensus 108 id~lv~~ag 116 (231)
+|+++.+.|
T Consensus 101 vDvv~D~vG 109 (187)
T d1vj1a2 101 VDVYFDNVG 109 (187)
T ss_dssp EEEEEESSC
T ss_pred ceEEEecCC
Confidence 999999987
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.94 E-value=0.00036 Score=48.21 Aligned_cols=73 Identities=18% Similarity=0.133 Sum_probs=51.0
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
|.++|.|+ |.+|+.+++.|.+.|.. |++++.+++..+.+.+ .....+..|.++++.++++ .....
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~--vvvid~d~~~~~~~~~------~~~~~~~gd~~~~~~l~~a------~i~~a 65 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHE--VLAVDINEEKVNAYAS------YATHAVIANATEENELLSL------GIRNF 65 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCC--CEEEESCHHHHHHTTT------TCSEEEECCTTCTTHHHHH------TGGGC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCe--EEEecCcHHHHHHHHH------hCCcceeeecccchhhhcc------CCccc
Confidence 45788877 68999999999999998 8888888766555432 1234566899988766543 12245
Q ss_pred cEEEEccc
Q 026924 109 NLLINASG 116 (231)
Q Consensus 109 d~lv~~ag 116 (231)
|.+|...+
T Consensus 66 ~~vi~~~~ 73 (134)
T d2hmva1 66 EYVIVAIG 73 (134)
T ss_dssp SEEEECCC
T ss_pred cEEEEEcC
Confidence 77765554
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.86 E-value=0.00043 Score=50.04 Aligned_cols=45 Identities=31% Similarity=0.365 Sum_probs=37.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~ 73 (231)
++.++||+||+||+|.+.+......|++ |+.+.+++++.+.+.++
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~--Viat~~s~~k~~~~~~l 67 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYD--VVASTGNREAADYLKQL 67 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCC--EEEEESSSSTHHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCc--eEEEecCHHHHHHHHhh
Confidence 4668999999999999999887789997 88899988877766554
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.83 E-value=0.002 Score=46.14 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=50.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ |++|...+..+...|++ |+.+++++++.+..++. |.+. ++ |-.++.+. . ++..+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~--vi~~~~~~~k~~~a~~l----Ga~~-~i--~~~~~~~~---~---~~~~~ 90 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAE--TYVISRSSRKREDAMKM----GADH-YI--ATLEEGDW---G---EKYFD 90 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHHH----TCSE-EE--EGGGTSCH---H---HHSCS
T ss_pred CCCEEEEECC-CCcchhHHHHhhhcccc--ccccccchhHHHHhhcc----CCcE-Ee--eccchHHH---H---Hhhhc
Confidence 5789999987 89999988877789997 88889988876654443 3221 11 22222211 1 22335
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
..|+++.+.+..
T Consensus 91 ~~d~vi~~~~~~ 102 (168)
T d1piwa2 91 TFDLIVVCASSL 102 (168)
T ss_dssp CEEEEEECCSCS
T ss_pred ccceEEEEecCC
Confidence 789999888754
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.82 E-value=0.0037 Score=44.53 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=58.6
Q ss_pred ccccccccccccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc----CCCceeEEEec
Q 026924 12 RKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLD 87 (231)
Q Consensus 12 ~~~~~~~~~~~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D 87 (231)
++.+.++....+..++.+++.|.|+ |.+|.+++..|+..|.-..+++.|.+++..+.....+.. .+........|
T Consensus 4 ~~~~~~~~~~~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d 82 (160)
T d1i0za1 4 KEKLIAPVAEEEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD 82 (160)
T ss_dssp HHHHCCCSSCSCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS
T ss_pred hhhhccCcCcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc
Confidence 3444444445555667788999996 899999999999998744699999987665543222211 12222222223
Q ss_pred CCChHHHHHHHHHHHHHcCCccEEEEccccC
Q 026924 88 LTVESTIEASAKSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 88 ls~~~~v~~~~~~~~~~~g~id~lv~~ag~~ 118 (231)
. ++ ...=|++|..||..
T Consensus 83 ~---~~-----------~~~adiVVitAg~~ 99 (160)
T d1i0za1 83 Y---SV-----------TANSKIVVVTAGVR 99 (160)
T ss_dssp G---GG-----------GTTCSEEEECCSCC
T ss_pred h---hh-----------cccccEEEEecCCc
Confidence 2 21 23569999999964
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.81 E-value=0.0035 Score=44.00 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=50.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.=|++.|.||.|.+|.++++.|.+.|++ |.+.+++......... . ..+...... ....+...+.++.....
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~--V~~~d~~~~~~~~~~~--~--~~~~v~~~~---~~~~~~~v~~~~~~~~~ 78 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYP--ISILDREDWAVAESIL--A--NADVVIVSV---PINLTLETIERLKPYLT 78 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCC--EEEECTTCGGGHHHHH--T--TCSEEEECS---CGGGHHHHHHHHGGGCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCC--cEecccccccccchhh--h--hcccccccc---chhhheeeeeccccccc
Confidence 4468999999999999999999999998 8888987754443211 1 223333322 34556666666654433
Q ss_pred CccEEEEc
Q 026924 107 SLNLLINA 114 (231)
Q Consensus 107 ~id~lv~~ 114 (231)
+=.+++..
T Consensus 79 ~~~iiiD~ 86 (152)
T d2pv7a2 79 ENMLLADL 86 (152)
T ss_dssp TTSEEEEC
T ss_pred CCceEEEe
Confidence 32344433
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.79 E-value=0.0023 Score=44.96 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=29.7
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEE
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVI 58 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi 58 (231)
-++++||.+||.||+ .+|..-++.|++.|++++|+
T Consensus 8 ~~~l~gkrvLViGgG-~va~~ka~~Ll~~GA~VtVv 42 (150)
T d1kyqa1 8 AHQLKDKRILLIGGG-EVGLTRLYKLMPTGCKLTLV 42 (150)
T ss_dssp EECCTTCEEEEEEES-HHHHHHHHHHGGGTCEEEEE
T ss_pred heeeCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEE
Confidence 357899999999995 69999999999999984333
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.78 E-value=0.00095 Score=48.15 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=51.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||.|+ |++|...+..+...|+. +|+.+++++++.+.+++ .+.. .+ .|-++ +.++...+.. ...
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~-~vv~~~~~~~k~~~~~~----~ga~-~~--i~~~~-~~~~~~~~~~--~~~ 99 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER----LGAD-HV--VDARR-DPVKQVMELT--RGR 99 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH----TTCS-EE--EETTS-CHHHHHHHHT--TTC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCc-ccccccchhHHHHHHhh----cccc-ee--ecCcc-cHHHHHHHhh--CCC
Confidence 4789999886 89999999888888987 67888888765444333 2322 12 34332 3343333221 123
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 100 g~d~vid~~g~ 110 (172)
T d1h2ba2 100 GVNVAMDFVGS 110 (172)
T ss_dssp CEEEEEESSCC
T ss_pred CceEEEEecCc
Confidence 59999999984
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.77 E-value=0.0014 Score=47.23 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=52.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHH-HHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~-v~~~~~~~~~~~ 105 (231)
+|.+++|.|+ |++|...+..+...|+. .|+.+++++++.+...+. |.+- + .|.++++. +++..... ..
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~-~Vi~~~~~~~rl~~a~~~----GAd~-~--in~~~~~~~~~~~~~~~--~~ 96 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEKAKVF----GATD-F--VNPNDHSEPISQVLSKM--TN 96 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHHT----TCCE-E--ECGGGCSSCHHHHHHHH--HT
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhc-hheeecchHHHHHHHHHc----CCcE-E--EcCCCcchhHHHHHHhh--cc
Confidence 5789999986 67899888889888887 688888888776554432 3211 1 23333322 23223322 12
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+.+|+++-++|.
T Consensus 97 ~G~d~vid~~G~ 108 (175)
T d1cdoa2 97 GGVDFSLECVGN 108 (175)
T ss_dssp SCBSEEEECSCC
T ss_pred CCcceeeeecCC
Confidence 479999999984
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.0016 Score=46.72 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=50.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ |++|...+..+...|++ ++++++++++.+.+++. +.+. ..|..+.+.. .+...
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~--~i~~~~~~~~~~~a~~l----Gad~---~i~~~~~~~~-------~~~~~ 92 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAH--VVAFTTSEAKREAAKAL----GADE---VVNSRNADEM-------AAHLK 92 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHH----TCSE---EEETTCHHHH-------HTTTT
T ss_pred CCCEEEEecc-chHHHHHHHHhhccccc--chhhccchhHHHHHhcc----CCcE---EEECchhhHH-------HHhcC
Confidence 5889999986 89999999888889997 66778877665433332 3321 2455554422 12235
Q ss_pred CccEEEEcccc
Q 026924 107 SLNLLINASGI 117 (231)
Q Consensus 107 ~id~lv~~ag~ 117 (231)
.+|++|.++|.
T Consensus 93 ~~D~vid~~g~ 103 (168)
T d1uufa2 93 SFDFILNTVAA 103 (168)
T ss_dssp CEEEEEECCSS
T ss_pred CCceeeeeeec
Confidence 79999999984
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.73 E-value=0.0018 Score=46.23 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=48.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.+++|.|+ |++|...+..+...|++ |+.+++++++.+..++ .+.+. ..|.++++..+.+. +..+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~--Vi~~~~~~~~~~~a~~----~Ga~~---~i~~~~~~~~~~~~----~~~~ 92 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLH--VAAIDIDDAKLELARK----LGASL---TVNARQEDPVEAIQ----RDIG 92 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH----TTCSE---EEETTTSCHHHHHH----HHHS
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCc--cceecchhhHHHhhhc----cCccc---cccccchhHHHHHH----Hhhc
Confidence 4789999886 89999998888888986 8888888766554333 23321 13555555444333 2334
Q ss_pred CccEEEEccc
Q 026924 107 SLNLLINASG 116 (231)
Q Consensus 107 ~id~lv~~ag 116 (231)
..+.+|-+++
T Consensus 93 g~~~~i~~~~ 102 (166)
T d1llua2 93 GAHGVLVTAV 102 (166)
T ss_dssp SEEEEEECCS
T ss_pred CCcccccccc
Confidence 4555555554
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.71 E-value=0.0065 Score=42.42 Aligned_cols=106 Identities=14% Similarity=0.066 Sum_probs=60.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++.|+||+|.+|.++|..|+..|.-..+++.|.++.+.+. .++ .. ...+.....-+. ..+.. + .+..-|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~Dl-~~-~~~~~~~~~~~~-~~~~~---~----~~~~aD 70 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-ADL-SH-IETRATVKGYLG-PEQLP---D----CLKGCD 70 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-HHH-TT-SSSSCEEEEEES-GGGHH---H----HHTTCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-HHH-hh-hhhhcCCCeEEc-CCChH---H----HhCCCC
Confidence 5889999999999999999998873379999986532222 222 21 111222222221 22222 1 223679
Q ss_pred EEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhh
Q 026924 110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL 159 (231)
Q Consensus 110 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 159 (231)
++|..+|... .+- .+. .+.++.|..-.-.+.+.+.++
T Consensus 71 ivVitag~~~--------~~g--~sR---~~ll~~N~~i~~~i~~~i~~~ 107 (144)
T d1mlda1 71 VVVIPAGVPR--------KPG--MTR---DDLFNTNATIVATLTAACAQH 107 (144)
T ss_dssp EEEECCSCCC--------CTT--CCG---GGGHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcCC--------CCC--CCc---chHHHHHHHHHHHHHHHHHhc
Confidence 9999998642 111 111 134666766555555555444
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.66 E-value=0.00044 Score=50.17 Aligned_cols=41 Identities=22% Similarity=0.135 Sum_probs=34.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL 71 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~ 71 (231)
.|++-|.|+ |.+|.++|..|+++|++ |.+.+|+++..+.+.
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~--V~~~~r~~~~~~~~~ 41 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQS--VLAWDIDAQRIKEIQ 41 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH
Confidence 378999998 68999999999999997 889999876666543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.00078 Score=49.10 Aligned_cols=44 Identities=25% Similarity=0.268 Sum_probs=36.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
++.++||+||+||+|...+......|++ |+.+.+++++.+.+.+
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~--Via~~~~~~k~~~~~~ 74 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQ--VVAVSGRESTHEYLKS 74 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHHHH
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCC--eEEEecchhHHHHHHh
Confidence 3568999999999999999888889997 8888888777655443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.61 E-value=0.0054 Score=40.80 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=32.5
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
-++++||++||.|++ .+|..-++.|++.|++ |.+.+...
T Consensus 7 ~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~--v~v~~~~~ 45 (113)
T d1pjqa1 7 FCQLRDRDCLIVGGG-DVAERKARLLLEAGAR--LTVNALTF 45 (113)
T ss_dssp EECCBTCEEEEECCS-HHHHHHHHHHHHTTBE--EEEEESSC
T ss_pred EEEeCCCEEEEECCC-HHHHHHHHHHHHCCCe--EEEEeccC
Confidence 357899999999987 5999999999999997 66655443
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.56 E-value=0.0059 Score=42.76 Aligned_cols=76 Identities=13% Similarity=0.176 Sum_probs=48.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh-hhh--hcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLK--NRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~-~~~--~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++.|.|+ |.+|..+|..|+..|.-..|++.|++++..+... ++. ............|. + .
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------~ 69 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------D 69 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------G
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------H
Confidence 457888896 8999999999999884225999999876555422 221 11222333444443 1 2
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
...-|++|..+|..
T Consensus 70 ~~~adivvitag~~ 83 (146)
T d1ez4a1 70 CKDADLVVITAGAP 83 (146)
T ss_dssp GTTCSEEEECCCC-
T ss_pred hccccEEEEecccc
Confidence 23679999999854
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.51 E-value=0.0026 Score=46.92 Aligned_cols=81 Identities=16% Similarity=0.082 Sum_probs=52.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+|.++||.|+ |++|...+..+...|+. .|+++++++++++...+ .+... ..|-.+ +++.+.+.++. ...
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~-~Vi~~d~~~~rl~~a~~----~Ga~~---~~~~~~-~~~~~~i~~~t-~g~ 93 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAA-VVIVGDLNPARLAHAKA----QGFEI---ADLSLD-TPLHEQIAALL-GEP 93 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH----TTCEE---EETTSS-SCHHHHHHHHH-SSS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhccc-ceeeecccchhhHhhhh----ccccE---EEeCCC-cCHHHHHHHHh-CCC
Confidence 5889999986 79998888888788887 68888888766554332 23322 123333 33333333332 224
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
..|++|.+.|..
T Consensus 94 g~D~vid~vG~~ 105 (195)
T d1kola2 94 EVDCAVDAVGFE 105 (195)
T ss_dssp CEEEEEECCCTT
T ss_pred CcEEEEECcccc
Confidence 699999999853
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.34 E-value=0.0029 Score=45.05 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=31.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+|.++||.|+ |++|...+..+...|++ |+.+++++++.+.
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~--v~~~~~~~~r~~~ 66 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLN--VVAVDIGDEKLEL 66 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCe--EeccCCCHHHhhh
Confidence 4788999875 88999988888888996 8888877655443
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.32 E-value=0.022 Score=37.67 Aligned_cols=70 Identities=11% Similarity=0.099 Sum_probs=52.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
.+.++.|.|| |-||+.++....+.|++ +++.+.++...-. . ..-.++..|..|.+.+.++..+.
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~--v~v~d~~~~~PA~--~------va~~~i~~~~~d~~~l~~~~~~~----- 73 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVE--VIAVDRYADAPAM--H------VAHRSHVINMLDGDALRRVVELE----- 73 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCE--EEEEESSTTCGGG--G------GSSEEEECCTTCHHHHHHHHHHH-----
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCE--EEEEcCCCCCchh--h------cCCeEEECCCCCHHHHHHHHHhh-----
Confidence 4567999995 47999999999999997 7777876543211 0 11245778999999998888764
Q ss_pred CccEEE
Q 026924 107 SLNLLI 112 (231)
Q Consensus 107 ~id~lv 112 (231)
.+|++.
T Consensus 74 ~~DviT 79 (111)
T d1kjqa2 74 KPHYIV 79 (111)
T ss_dssp CCSEEE
T ss_pred CCceEE
Confidence 678875
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.0026 Score=45.06 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=32.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+++|.|+ |.+|..++..|++.|++ |.+.+|++...+..
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~--V~~~~r~~~~~~~~ 39 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHE--VQGWLRVPQPYCSV 39 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSCCSEEEE
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCc--eEEEEcCHHHhhhh
Confidence 5889988 89999999999999997 88889988766553
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.24 E-value=0.022 Score=40.02 Aligned_cols=42 Identities=12% Similarity=-0.064 Sum_probs=34.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
+.+++.|+|+ |.+|..+|..++..+.. .+++.|.+++.++..
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~ 47 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGK 47 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhH
Confidence 4577888997 89999999999998865 599999888766653
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.21 E-value=0.021 Score=41.07 Aligned_cols=24 Identities=21% Similarity=-0.011 Sum_probs=21.5
Q ss_pred CeEEEEecCCCchhHHHHHHHHhc
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEK 51 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~ 51 (231)
..++.||||+|.||.+++..|++.
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g 47 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASG 47 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcC
Confidence 447999999999999999999974
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.16 E-value=0.011 Score=41.36 Aligned_cols=77 Identities=19% Similarity=0.204 Sum_probs=50.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh----cCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++++.|+|+ |.+|.++|..|+..|.-..+++.|++++..+.....+. .....+.....|. +
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~---------- 70 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D---------- 70 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G----------
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H----------
Confidence 4667888897 89999999999998863369999998766554322221 1122343433332 1
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
.+..-|++|..+|..
T Consensus 71 -~l~daDvvvitag~~ 85 (148)
T d1ldna1 71 -DCRDADLVVICAGAN 85 (148)
T ss_dssp -GTTTCSEEEECCSCC
T ss_pred -HhccceeEEEecccc
Confidence 223569999999864
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.061 Score=37.25 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=43.8
Q ss_pred EEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCCccchhhhhhcCCCceeEEE-ecCCChHHHHHHHHHHHHHcCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ-LDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~-~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
++.|+|++|.+|.++|..|+.+ +.-..+.+.|..+ ..+.....+........... .+-.+.++ + -.
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~-------~----~~ 69 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA-------L----EG 69 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH-------H----TT
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc-------c----CC
Confidence 5789999999999999988643 4211588888754 33332222222222211111 11222221 2 24
Q ss_pred ccEEEEccccC
Q 026924 108 LNLLINASGIL 118 (231)
Q Consensus 108 id~lv~~ag~~ 118 (231)
-|++|..+|..
T Consensus 70 aDvvvitaG~~ 80 (145)
T d2cmda1 70 ADVVLISAGVR 80 (145)
T ss_dssp CSEEEECCSCC
T ss_pred CCEEEECCCcc
Confidence 69999999964
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.09 E-value=0.026 Score=39.04 Aligned_cols=74 Identities=11% Similarity=-0.015 Sum_probs=44.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC---CCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.|+|+ |.+|.+++..++.+|.-..+++.|.+++..+....++... ......... +. +...
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~-----------~~~~ 67 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY-----------SDVK 67 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGGT
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH-----------HHhC
Confidence 4667787 9999999999999886436999999887766533332221 112222111 12 1234
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
.-|++|..+|..
T Consensus 68 ~adivvitag~~ 79 (142)
T d1y6ja1 68 DCDVIVVTAGAN 79 (142)
T ss_dssp TCSEEEECCCC-
T ss_pred CCceEEEecccc
Confidence 679999999854
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.09 E-value=0.0087 Score=43.03 Aligned_cols=84 Identities=10% Similarity=0.066 Sum_probs=58.7
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh---------------cCCCceeEEEecCCChHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN---------------RFPERLDVLQLDLTVESTI 94 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~---------------~~~~~v~~~~~Dls~~~~v 94 (231)
.+-|.|- |.+|.++|+.|+++|++ |++.+|++++.+.+.+... ..-.....+-..+.+.+.+
T Consensus 4 nIg~IGl-G~MG~~mA~~L~~~G~~--V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v 80 (176)
T d2pgda2 4 DIALIGL-AVMGQNLILNMNDHGFV--VCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV 80 (176)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCC--EEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred cEEEEeE-hHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence 4667776 68999999999999998 8899999877666433211 1112234455566777888
Q ss_pred HHHHHHHHHHcCCccEEEEccc
Q 026924 95 EASAKSIKEKYGSLNLLINASG 116 (231)
Q Consensus 95 ~~~~~~~~~~~g~id~lv~~ag 116 (231)
....+.+.....+=+++|...-
T Consensus 81 ~~v~~~l~~~~~~g~iiid~sT 102 (176)
T d2pgda2 81 DNFIEKLVPLLDIGDIIIDGGN 102 (176)
T ss_dssp HHHHHHHHHHCCTTCEEEECSC
T ss_pred HHHHHHHHhccccCcEEEecCc
Confidence 8888888776655677776654
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.06 E-value=0.012 Score=41.62 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=51.9
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh---------hc-CCCceeEEEecCCChHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK---------NR-FPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~---------~~-~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
++.|.|. |.+|.++|+.|.+.|++ |++.+|+++..+.+.+.. +. ...++.++.+ -.+.++++++
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~--V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~ 75 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHY--LIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLE 75 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCE--EEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhh
Confidence 3677766 89999999999999997 888899876544322211 11 1123433332 3567888888
Q ss_pred HHHHHcCCccEEEEccc
Q 026924 100 SIKEKYGSLNLLINASG 116 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag 116 (231)
++.....+=.+++...+
T Consensus 76 ~l~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 76 KLIPHLSPTAIVTDVAS 92 (165)
T ss_dssp HHGGGSCTTCEEEECCS
T ss_pred hhhhhcccccceeeccc
Confidence 88765555555555543
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.03 E-value=0.008 Score=42.11 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=52.0
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCccE
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL 110 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id~ 110 (231)
++|.|. |.+|+.+++.|.+.|.+ +++++.+++......+... ...+.++..|.++++.++++ .....+.
T Consensus 6 iII~G~-g~~g~~l~~~L~~~~~~--v~vId~d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a------~i~~a~~ 74 (153)
T d1id1a_ 6 FIVCGH-SILAINTILQLNQRGQN--VTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKA------GIDRCRA 74 (153)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred EEEECC-CHHHHHHHHHHHHcCCC--EEEEeccchhHHHHHHHhh--cCCcEEEEccCcchHHHHHh------ccccCCE
Confidence 777777 58999999999999998 7777777654433322222 35788899999998755422 2235677
Q ss_pred EEEccc
Q 026924 111 LINASG 116 (231)
Q Consensus 111 lv~~ag 116 (231)
+|...+
T Consensus 75 vi~~~~ 80 (153)
T d1id1a_ 75 ILALSD 80 (153)
T ss_dssp EEECSS
T ss_pred EEEccc
Confidence 775543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.99 E-value=0.0052 Score=46.79 Aligned_cols=81 Identities=10% Similarity=0.064 Sum_probs=54.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++++++|+|.|+ ||+|..++..|++.|.. .+.++|.+.-....+.. ++.+-.-|+- ...++.+.+++++
T Consensus 26 ~kL~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~Ve~sNL~R-------Q~l~~~~diG-~~K~~~a~~~l~~ 95 (247)
T d1jw9b_ 26 EALKDSRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQR-------QTLHSDATVG-QPKVESARDALTR 95 (247)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGT-------CTTCCGGGTT-SBHHHHHHHHHHH
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCcccchhhhhh-------hccccHhhcC-chHHHHHHHHHHH
Confidence 4688999999995 58999999999999998 89999887544444321 1222223443 3356666666766
Q ss_pred HcCCccEEEEc
Q 026924 104 KYGSLNLLINA 114 (231)
Q Consensus 104 ~~g~id~lv~~ 114 (231)
..+.+++..+.
T Consensus 96 ~np~~~i~~~~ 106 (247)
T d1jw9b_ 96 INPHIAITPVN 106 (247)
T ss_dssp HCTTSEEEEEC
T ss_pred hhcccchhhhh
Confidence 66666655443
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.91 E-value=0.025 Score=39.36 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=48.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh-hhh---hcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLK---NRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~-~~~---~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
|++.|+|+ |.+|..+|..|+.+|.-..+++.|.+++..+... ++. ...+........| .++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----------- 66 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----------- 66 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG-----------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH-----------
Confidence 56778895 8999999999999884336999999876655422 222 1122233333323 221
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
.-.-|++|..+|..
T Consensus 67 l~~adiVVitaG~~ 80 (146)
T d1hyha1 67 LADADVVISTLGNI 80 (146)
T ss_dssp GTTCSEEEECCSCG
T ss_pred hccccEEEEecccc
Confidence 23569999999864
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.89 E-value=0.0012 Score=49.14 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=33.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
+++||+++|.| .|.+|..+|+.|.+.|++ |++.+.+...
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gak--vvv~d~d~~~ 62 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQ--LLVADTDTER 62 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCE--EEEecchHHH
Confidence 68999999987 668999999999999997 8877776543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.85 E-value=0.045 Score=37.95 Aligned_cols=35 Identities=20% Similarity=0.099 Sum_probs=30.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++.|+||+|.+|.++|..|+.+|.-..+++.|+++
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~ 36 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH 36 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence 58999999999999999999998422699999875
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.72 E-value=0.017 Score=39.29 Aligned_cols=73 Identities=18% Similarity=0.225 Sum_probs=51.5
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
++.|.|++|..|+++++.+.+.|.. .+...+++.. +.+ . ..+ +..|+|.++.+.+.++...+. ++-
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~-l~~~id~~~~--~~~----~--~~D---VvIDFS~p~~~~~~l~~~~~~--~~p 67 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHE-LVLKVDVNGV--EEL----D--SPD---VVIDFSSPEALPKTVDLCKKY--RAG 67 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE-EEEEEETTEE--EEC----S--CCS---EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCe-EEEEECCCcH--HHh----c--cCC---EEEEecCHHHHHHHHHHHHhc--CCC
Confidence 4899999999999999999999987 3444444321 111 1 112 357999999999999988765 455
Q ss_pred EEEEccc
Q 026924 110 LLINASG 116 (231)
Q Consensus 110 ~lv~~ag 116 (231)
+|+-..|
T Consensus 68 ~ViGTTG 74 (128)
T d1vm6a3 68 LVLGTTA 74 (128)
T ss_dssp EEECCCS
T ss_pred EEEEcCC
Confidence 6665555
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.64 E-value=0.022 Score=39.95 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=21.4
Q ss_pred EEEEecCCCchhHHHHHHHHhcC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKN 52 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G 52 (231)
++.|+||+|.+|..++..|+..+
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhcc
Confidence 79999999999999999999865
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.60 E-value=0.034 Score=39.24 Aligned_cols=85 Identities=21% Similarity=0.153 Sum_probs=52.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh----------cCCCceeEEEecCCChHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN----------RFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~----------~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
.++|.|. |-+|.++|+.|.+.|+...|+..|++++..+.+.+... ........+-+- .-.+.+.++++
T Consensus 3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl~ 80 (171)
T d2g5ca2 3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIAK 80 (171)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHHH
T ss_pred EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhhh
Confidence 5888875 89999999999999986578989998766554322210 000111122222 23466778888
Q ss_pred HHHHHcCCccEEEEccc
Q 026924 100 SIKEKYGSLNLLINASG 116 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag 116 (231)
++.....+=.+++-..+
T Consensus 81 ~l~~~~~~~~ii~d~~s 97 (171)
T d2g5ca2 81 KLSYILSEDATVTDQGS 97 (171)
T ss_dssp HHHHHSCTTCEEEECCS
T ss_pred hhhcccccccccccccc
Confidence 88766554445544444
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.51 E-value=0.071 Score=36.68 Aligned_cols=39 Identities=18% Similarity=0.010 Sum_probs=31.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
|++.|+|+ |.+|.++|..|+.++.. .+++.|.+++..+.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~ 40 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQG 40 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchh
Confidence 46777786 99999999999998875 58999988776554
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.47 E-value=0.018 Score=40.73 Aligned_cols=79 Identities=16% Similarity=0.066 Sum_probs=50.1
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh----cCCCceeEEEecCCChHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN----RFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
+++..++.|+|+ |.+|..+|..|+..|.-..+++.|.+++.++.....+. ..+........|. +
T Consensus 16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~-------- 83 (159)
T d2ldxa1 16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N-------- 83 (159)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G--------
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h--------
Confidence 445556888886 89999999999998863359999988766554322222 1122222222232 1
Q ss_pred HHHHcCCccEEEEccccC
Q 026924 101 IKEKYGSLNLLINASGIL 118 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~ 118 (231)
....-|++|..+|..
T Consensus 84 ---~~~~adivvitag~~ 98 (159)
T d2ldxa1 84 ---VSANSKLVIITAGAR 98 (159)
T ss_dssp ---GGTTEEEEEECCSCC
T ss_pred ---hhccccEEEEecccc
Confidence 224679999999864
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.46 E-value=0.0038 Score=45.87 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=33.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
|++.|.|+ |-+|..+|..++..|+. |++.|++++.++.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~--V~l~D~~~~~l~~ 42 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHT--VVLVDQTEDILAK 42 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCc--EEEEECChHHHHH
Confidence 57889998 67999999999999997 9999998876554
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.45 E-value=0.12 Score=35.86 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=49.3
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc----CCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.++-|.|+ |.+|.+++..|+..+.. .+++.|++++..+.....+.. .+.+......|- . +.
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~-el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~ 68 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DD 68 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------cc
Confidence 35777785 89999999988888876 799999988776653222211 123333333321 2 12
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
...-|++|..+|..
T Consensus 69 ~~~advvvitag~~ 82 (150)
T d1t2da1 69 LAGADVVIVTAGFT 82 (150)
T ss_dssp GTTCSEEEECCSCS
T ss_pred cCCCcEEEEecccc
Confidence 24679999999965
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.43 E-value=0.047 Score=37.74 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=47.8
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC--Cccc-hhhhhh--cCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATG-LLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~--~~~~-~~~~~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
++.|+|++|.+|.++|..++.+|.-..+++.|.+.. ..+. ..++.. ...........|. ++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----------- 67 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----------- 67 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence 588999999999999999999887546888886432 2222 122211 2233444333332 21
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
...-|++|..+|..
T Consensus 68 ~~~aDiVvitaG~~ 81 (142)
T d1o6za1 68 TAGSDVVVITAGIP 81 (142)
T ss_dssp GTTCSEEEECCCCC
T ss_pred hhhcCEEEEecccc
Confidence 23679999999864
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.37 E-value=0.03 Score=40.03 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=33.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
.+++||.++|.|-|.=.|+-++..|+++|+. |..++.+
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaT--Vt~~~~~ 62 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLANDGAT--VYSVDVN 62 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCE--EEEECSS
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHCCCE--EEEeccc
Confidence 3789999999999999999999999999995 7776654
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.32 E-value=0.015 Score=42.74 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=56.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+++|+++|=.|++.|. ++..++..|+. .|+.++.++...+.+.+-.+..+.+..++..|+.+.
T Consensus 44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~-~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------- 106 (201)
T d1wy7a1 44 DIEGKVVADLGAGTGV---LSYGALLLGAK-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------- 106 (201)
T ss_dssp SSTTCEEEEETCTTCH---HHHHHHHTTCS-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred CCCCCEEEECcCcchH---HHHHHHHcCCC-EEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence 6789999999997662 23344567876 699999998777766555555567888888887432
Q ss_pred cCCccEEEEccccC
Q 026924 105 YGSLNLLINASGIL 118 (231)
Q Consensus 105 ~g~id~lv~~ag~~ 118 (231)
.++.|++|.|+.+.
T Consensus 107 ~~~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 107 NSRVDIVIMNPPFG 120 (201)
T ss_dssp CCCCSEEEECCCCS
T ss_pred CCcCcEEEEcCccc
Confidence 25799999999764
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.18 E-value=0.19 Score=34.39 Aligned_cols=75 Identities=16% Similarity=-0.024 Sum_probs=48.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh----cCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++.|+|+ |.+|.+++..|+..|.-..+++.|.+++..+....... ....+......+ +.+ .+
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~-----------~~ 67 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYA-----------DT 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGG-----------GG
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHH-----------Hh
Confidence 4778896 89999999999998853369999998877664322211 112233333222 222 12
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
-.-|++|..+|..
T Consensus 68 ~dadvvvitag~~ 80 (142)
T d1guza1 68 ANSDIVIITAGLP 80 (142)
T ss_dssp TTCSEEEECCSCC
T ss_pred cCCeEEEEEEecC
Confidence 3679999999864
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.02 E-value=0.015 Score=42.72 Aligned_cols=74 Identities=15% Similarity=0.080 Sum_probs=52.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+++||++|=.|+++|+ ++..++..|++ .|+.++.++...+.+.+- ..++.++.+|+.+.
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~-~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~l------------ 104 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAE-SVTAFDIDPDAIETAKRN----CGGVNFMVADVSEI------------ 104 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBS-EEEEEESCHHHHHHHHHH----CTTSEEEECCGGGC------------
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCC-cccccccCHHHHHHHHHc----cccccEEEEehhhc------------
Confidence 36789999999998773 33446677876 799999877655443322 34678888998542
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
-++.|+||.|+.+.
T Consensus 105 -~~~fD~Vi~NPPfg 118 (197)
T d1ne2a_ 105 -SGKYDTWIMNPPFG 118 (197)
T ss_dssp -CCCEEEEEECCCC-
T ss_pred -CCcceEEEeCcccc
Confidence 25899999998754
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=94.92 E-value=0.015 Score=42.18 Aligned_cols=38 Identities=26% Similarity=0.303 Sum_probs=33.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.+.||++.|.|.+. ||+.+++.+...|++ |+..+++..
T Consensus 39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~--v~~~d~~~~ 76 (181)
T d1qp8a1 39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQ--VRGFSRTPK 76 (181)
T ss_dssp CCTTCEEEEESCST-HHHHHHHHHHHTTCE--EEEECSSCC
T ss_pred cccCceEEEecccc-ccccceeeeeccccc--ccccccccc
Confidence 47899999999874 999999999999997 888888654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.87 E-value=0.0063 Score=43.87 Aligned_cols=46 Identities=24% Similarity=0.252 Sum_probs=37.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK 74 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~ 74 (231)
+++||.+||.|++ |-+++++..|.+.| + |.+..|+.++.+.+.+..
T Consensus 15 ~~~~k~vlIlGaG-G~arai~~aL~~~~-~--i~I~nR~~~ka~~l~~~~ 60 (177)
T d1nvta1 15 RVKDKNIVIYGAG-GAARAVAFELAKDN-N--IIIANRTVEKAEALAKEI 60 (177)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-E--EEEECSSHHHHHHHHHHH
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHcccc-c--eeeehhhhhHHHHHHHHH
Confidence 5789999999875 78999999997765 4 999999988877765443
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.72 E-value=0.051 Score=39.48 Aligned_cols=41 Identities=15% Similarity=0.032 Sum_probs=34.0
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
...++||++.|.|.+ .||+.+++.+...|.+ |+..++....
T Consensus 42 ~~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~~ 82 (191)
T d1gdha1 42 GEKLDNKTLGIYGFG-SIGQALAKRAQGFDMD--IDYFDTHRAS 82 (191)
T ss_dssp BCCCTTCEEEEECCS-HHHHHHHHHHHTTTCE--EEEECSSCCC
T ss_pred cceecccceEEeecc-cchHHHHHHHHhhccc--cccccccccc
Confidence 346789999999876 7999999999999997 8887775543
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.70 E-value=0.052 Score=38.63 Aligned_cols=82 Identities=13% Similarity=0.184 Sum_probs=50.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC------------------CceeEEEecCCChH
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP------------------ERLDVLQLDLTVES 92 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~------------------~~v~~~~~Dls~~~ 92 (231)
+-|. |.|.+|.++|++|+++|++ |.+.+|++++.+.+.+...... .....+..-+.+..
T Consensus 4 IGvI-GlG~MG~~ma~~L~~~G~~--V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (178)
T d1pgja2 4 VGVV-GLGVMGANLALNIAEKGFK--VAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGA 80 (178)
T ss_dssp EEEE-CCSHHHHHHHHHHHHTTCC--EEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSH
T ss_pred EEEE-eehHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcc
Confidence 4444 4568999999999999998 8899998877666543321110 11223333444555
Q ss_pred HHHHHHHHHHHHcCCccEEEEcc
Q 026924 93 TIEASAKSIKEKYGSLNLLINAS 115 (231)
Q Consensus 93 ~v~~~~~~~~~~~g~id~lv~~a 115 (231)
.+...+..+...+.+=++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~iii~~s 103 (178)
T d1pgja2 81 ATDSTIEQLKKVFEKGDILVDTG 103 (178)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECC
T ss_pred hhhhhhhhhhhhccccceecccC
Confidence 56666666655555545665544
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.67 E-value=0.015 Score=48.00 Aligned_cols=82 Identities=17% Similarity=0.168 Sum_probs=53.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+++.+|||.|++ |||..+++.|+..|.. .+.++|.+.-....+- .++.+-.-|+- ...++.+.+++.+.
T Consensus 34 ~l~~~kVlvvG~G-glG~ei~k~L~~~Gvg-~i~lvD~D~Ve~sNL~-------RQflf~~~diG-~~Ka~~a~~~l~~~ 103 (426)
T d1yovb1 34 LLDTCKVLVIGAG-GLGCELLKNLALSGFR-QIHVIDMDTIDVSNLN-------RQFLFRPKDIG-RPKAEVAAEFLNDR 103 (426)
T ss_dssp HHHHCCEEEECSS-TTHHHHHHHHHTTTCC-CEEEECCCBCCGGGGG-------TCTTCCGGGTT-SBHHHHHHHHHHHH
T ss_pred HHhcCeEEEECCC-HHHHHHHHHHHHcCCC-eEEEEECCCcchhhhc-------ccccCChhHcC-cHHHHHHHHHHHhh
Confidence 3567789999995 7999999999999997 7988888654433321 12222233553 23455566666666
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
.+.+++..+..-
T Consensus 104 np~v~i~~~~~~ 115 (426)
T d1yovb1 104 VPNCNVVPHFNK 115 (426)
T ss_dssp STTCCCEEECSC
T ss_pred CCCCceEeeecc
Confidence 666666655443
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=94.59 E-value=0.028 Score=39.52 Aligned_cols=83 Identities=22% Similarity=0.264 Sum_probs=51.0
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc-------CCCceeEEEecCCChHHHHHHH---HH
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-------FPERLDVLQLDLTVESTIEASA---KS 100 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~-------~~~~v~~~~~Dls~~~~v~~~~---~~ 100 (231)
+-|.|- |.+|..+|+.|+++|++ |++.+|+++..+.+.+.... .-.+...+-.=+.+.+.+++++ +.
T Consensus 3 IgiIGl-G~MG~~~A~~L~~~G~~--V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~ 79 (161)
T d1vpda2 3 VGFIGL-GIMGKPMSKNLLKAGYS--LVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG 79 (161)
T ss_dssp EEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred EEEEeh-hHHHHHHHHHHHHCCCe--EEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcc
Confidence 556655 78999999999999997 88999987766554332110 0112334445566777777766 23
Q ss_pred HHHHcCCccEEEEccc
Q 026924 101 IKEKYGSLNLLINASG 116 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag 116 (231)
+.....+=+++|.+.-
T Consensus 80 ~~~~~~~g~iiid~sT 95 (161)
T d1vpda2 80 IIEGAKPGTVLIDMSS 95 (161)
T ss_dssp HHHHCCTTCEEEECSC
T ss_pred hhhccCCCCEEEECCC
Confidence 3333334455555443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=94.58 E-value=0.095 Score=35.92 Aligned_cols=74 Identities=22% Similarity=0.193 Sum_probs=47.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchh-hhhh--cCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKN--RFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~-~~~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
++.|+|+ |.+|.+++..++.+|.-..+++.|.+++.++... ++.. ...........| .++ +.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~ 66 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK 66 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence 4677786 8999999999998875336999999876655422 2211 122233333322 221 23
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
.-|++|..+|..
T Consensus 67 ~adivvitag~~ 78 (140)
T d1a5za1 67 GSDVVIVAAGVP 78 (140)
T ss_dssp TCSEEEECCCCC
T ss_pred CCCEEEEecccc
Confidence 579999999864
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.58 E-value=0.0055 Score=44.70 Aligned_cols=38 Identities=24% Similarity=0.171 Sum_probs=32.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
|++.|.|+ |-+|..+|..++.+|++ |.+.|++++.++.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~--V~l~D~~~~~l~~ 42 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTP--ILMKDINEHGIEQ 42 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCC--EEEECSSHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCe--EEEEECCHHHHhh
Confidence 35888888 67999999999999998 9999998766554
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.54 E-value=0.11 Score=37.80 Aligned_cols=39 Identities=26% Similarity=0.100 Sum_probs=33.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
..+.||++.|.|.+ .||+.+++.|..-|++ |+..++...
T Consensus 41 ~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~ 79 (199)
T d1dxya1 41 KELGQQTVGVMGTG-HIGQVAIKLFKGFGAK--VIAYDPYPM 79 (199)
T ss_dssp CCGGGSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCC
T ss_pred ccccceeeeeeecc-ccccccccccccccee--eeccCCccc
Confidence 46789999999876 7999999999999997 888887643
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.52 E-value=0.22 Score=33.97 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=58.7
Q ss_pred cCeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 27 ~~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
+-|.+.|.|+| +..|..+.+.|.+.|++ |+.+......... ....+...+..+..+.. ....+.+..+++++
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~--v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~ 94 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQA 94 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCE--EEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHH
Confidence 46899999998 68999999999999997 8777665443332 22223333444444322 24577888888888
Q ss_pred HHHcCCccEEEEccccC
Q 026924 102 KEKYGSLNLLINASGIL 118 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~~ 118 (231)
.+. .+..++...|..
T Consensus 95 ~~~--g~k~v~~~~G~~ 109 (139)
T d2d59a1 95 IKK--GAKVVWFQYNTY 109 (139)
T ss_dssp HHH--TCSEEEECTTCC
T ss_pred HHh--CCCEEEEecccc
Confidence 765 356777667643
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.45 E-value=0.1 Score=37.99 Aligned_cols=38 Identities=24% Similarity=0.118 Sum_probs=32.6
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
..+.||++.|.|-+ .||+.+|+.|..-|++ |+..++..
T Consensus 39 ~el~gk~vgIiG~G-~IG~~va~~l~~fg~~--V~~~d~~~ 76 (197)
T d1j4aa1 39 REVRDQVVGVVGTG-HIGQVFMQIMEGFGAK--VITYDIFR 76 (197)
T ss_dssp CCGGGSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSC
T ss_pred ccccCCeEEEeccc-ccchhHHHhHhhhccc--ccccCccc
Confidence 36789999999976 7999999999999997 88777654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=94.44 E-value=0.087 Score=38.26 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=33.7
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
...+.||++.|.|.+ .||+.+|+.+..-|++ |+..++...
T Consensus 44 ~~eL~gktvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~ 83 (193)
T d1mx3a1 44 AARIRGETLGIIGLG-RVGQAVALRAKAFGFN--VLFYDPYLS 83 (193)
T ss_dssp CCCCTTCEEEEECCS-HHHHHHHHHHHTTTCE--EEEECTTSC
T ss_pred ceeeeCceEEEeccc-cccccceeeeeccccc--eeeccCccc
Confidence 346889999999765 7999999999999997 888887543
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.43 E-value=0.085 Score=35.55 Aligned_cols=77 Identities=17% Similarity=0.142 Sum_probs=51.5
Q ss_pred cCeEEEEecCC-Cchh---------HHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHH
Q 026924 27 KGGVSLVQGAS-RGIG---------LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA 96 (231)
Q Consensus 27 ~~k~~LVtGas-~gIG---------~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~ 96 (231)
..|++||.|++ -.|| ...++.|.+.|++ ++++..|++....-.+. .+++.+-+.. .+.+.+
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~--~iliN~NP~TVstd~d~----aD~lYfePlt---~e~v~~ 76 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYR--VINVNSNPATIMTDPEM----ADATYIEPIH---WEVVRK 76 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCE--EEEECSCTTCGGGCGGG----SSEEECSCCC---HHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCe--EEEecCchHhhhcChhh----cceeeeecCC---HHHHHH
Confidence 45789998886 3444 5678888899997 88888887765432221 3455554544 467766
Q ss_pred HHHHHHHHcCCccEEEEcccc
Q 026924 97 SAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 97 ~~~~~~~~~g~id~lv~~ag~ 117 (231)
++++- ++|+++...|.
T Consensus 77 Ii~~E-----~pd~il~~~GG 92 (127)
T d1a9xa3 77 IIEKE-----RPDAVLPTMGG 92 (127)
T ss_dssp HHHHH-----CCSEEECSSSH
T ss_pred HHHHh-----CcCCeEEEeee
Confidence 66663 78999866663
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.32 E-value=0.039 Score=43.15 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=51.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhh-hhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-KNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~-~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.++||+||-.|++.|+ ++..+++.|++ +|+.++.++......... ......++.++..|+.+...
T Consensus 33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~-~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~---------- 98 (311)
T d2fyta1 33 IFKDKVVLDVGCGTGI---LSMFAAKAGAK-KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL---------- 98 (311)
T ss_dssp GTTTCEEEEETCTTSH---HHHHHHHTTCS-EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred cCCcCEEEEECCCCCH---HHHHHHHcCCC-EEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence 3579999999999876 56778888987 799999876543222111 22334578888888766431
Q ss_pred HcCCccEEEEcc
Q 026924 104 KYGSLNLLINAS 115 (231)
Q Consensus 104 ~~g~id~lv~~a 115 (231)
...+.|++|...
T Consensus 99 ~~~~~D~Ivse~ 110 (311)
T d2fyta1 99 PVEKVDVIISEW 110 (311)
T ss_dssp SCSCEEEEEECC
T ss_pred ccccceEEEEee
Confidence 113678887654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.14 E-value=0.12 Score=37.15 Aligned_cols=40 Identities=20% Similarity=0.090 Sum_probs=33.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
...+.||++.|.|. |.||+.+++.+..-|++ |+..++...
T Consensus 39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~--v~~~d~~~~ 78 (184)
T d1ygya1 39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAY--VVAYDPYVS 78 (184)
T ss_dssp BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCE--EEEECTTSC
T ss_pred cccccceeeeeccc-cchhHHHHHHhhhccce--EEeecCCCC
Confidence 34678999999985 68999999999999997 888887654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.13 E-value=0.18 Score=36.30 Aligned_cols=64 Identities=17% Similarity=0.003 Sum_probs=43.4
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc-------chhhhhhcCCCceeEEEecCCCh
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-------GLLDLKNRFPERLDVLQLDLTVE 91 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~-------~~~~~~~~~~~~v~~~~~Dls~~ 91 (231)
...+.++++.|.|. |.||+.+++.+...|++ |+..++...... .+.+.++. .++..+.+.++++
T Consensus 39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~--v~~~d~~~~~~~~~~~~~~~l~ell~~--sDii~i~~plt~~ 109 (188)
T d1sc6a1 39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMY--VYFYDIENKLPLGNATQVQHLSDLLNM--SDVVSLHVPENPS 109 (188)
T ss_dssp CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSCCCCCTTCEECSCHHHHHHH--CSEEEECCCSSTT
T ss_pred cccccceEEEEeec-ccchhhhhhhcccccce--EeeccccccchhhhhhhhhhHHHHHhh--ccceeecccCCcc
Confidence 34678999999965 58999999999999997 888887543222 12222222 4566666666554
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.12 E-value=0.059 Score=37.83 Aligned_cols=84 Identities=15% Similarity=0.100 Sum_probs=51.2
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh-------cCCCceeEEEecCCChHHHHHHHHH--
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-------RFPERLDVLQLDLTVESTIEASAKS-- 100 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dls~~~~v~~~~~~-- 100 (231)
++-+.| .|-+|.++|++|+++|++ |.+.+|+....+.+..... +.......+..-+.+.+.++.++..
T Consensus 3 kIg~IG-lG~MG~~iA~~L~~~g~~--v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~ 79 (162)
T d3cuma2 3 QIAFIG-LGHMGAPMATNLLKAGYL--LNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD 79 (162)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTT
T ss_pred EEEEEE-EHHHHHHHHHHHHHCCCe--EEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccc
Confidence 355664 578999999999999997 8888998766554322210 1112334555556667777766554
Q ss_pred -HHHHcCCccEEEEccc
Q 026924 101 -IKEKYGSLNLLINASG 116 (231)
Q Consensus 101 -~~~~~g~id~lv~~ag 116 (231)
+.....+=+++|.+..
T Consensus 80 ~~~~~l~~g~iiid~st 96 (162)
T d3cuma2 80 GLLAHIAPGTLVLECST 96 (162)
T ss_dssp CHHHHSCTTCEEEECSC
T ss_pred cccccCCCCCEEEECCC
Confidence 3333333356665554
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.04 E-value=0.083 Score=36.82 Aligned_cols=24 Identities=21% Similarity=0.151 Sum_probs=21.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKN 52 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G 52 (231)
.++.|+||+|.+|.+++..|++.+
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred eEEEEECCCCHHHHHHHHHHHHHH
Confidence 369999999999999999998754
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=94.02 E-value=0.19 Score=34.46 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=31.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
++.|+|+ |.+|.++|..++.+|.-..+++.|.+++..+.
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g 41 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEA 41 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchh
Confidence 4677786 99999999999998864369999988766554
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.86 E-value=0.041 Score=39.26 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=35.7
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.+++||.++|.|.|.-.|+-++..|+++|+. |..++.....
T Consensus 35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gat--Vt~~~~~t~~ 75 (170)
T d1a4ia1 35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT--VTTCHSKTAH 75 (170)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTCSS
T ss_pred cccccceEEEEecCCccchHHHHHHHhccCc--eEEEeccccc
Confidence 3679999999999999999999999999995 8877765544
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=93.71 E-value=0.05 Score=38.56 Aligned_cols=40 Identities=25% Similarity=0.198 Sum_probs=34.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.+++||.++|.|.|.-.|+-++..|.++|+. |..+++...
T Consensus 33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gat--Vt~~h~~t~ 72 (166)
T d1b0aa1 33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCT--TTVTHRFTK 72 (166)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCE--EEEECSSCS
T ss_pred cccccceEEEEeccccccHHHHHHHHHhhcc--ccccccccc
Confidence 3678999999999999999999999999996 777665443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.60 E-value=0.29 Score=33.16 Aligned_cols=76 Identities=11% Similarity=0.132 Sum_probs=49.3
Q ss_pred EEEEecCCCchhHHHHHHHHh-cCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 30 VSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
++.|.|++|.+|+++++...+ .+++ .+...++.+. ... . ...+.+ +..|+|.++.+.+.++...+. ++
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~-l~~~~d~~~~-~~~---~-~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~ 69 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLT-LSAELDAGDP-LSL---L-TDGNTE---VVIDFTHPDVVMGNLEFLIDN--GI 69 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSE-EEEEECTTCC-THH---H-HTTTCS---EEEECCCTTTHHHHHHHHHHT--TC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCCc-hhh---h-ccccCC---EEEEcccHHHHHHHHHHHHhc--CC
Confidence 478999999999999998766 4555 3333444321 111 1 111122 457999999999999888764 45
Q ss_pred cEEEEccc
Q 026924 109 NLLINASG 116 (231)
Q Consensus 109 d~lv~~ag 116 (231)
.+|+-..|
T Consensus 70 ~~ViGTTG 77 (135)
T d1yl7a1 70 HAVVGTTG 77 (135)
T ss_dssp EEEECCCC
T ss_pred CEEEeccc
Confidence 66664444
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=93.53 E-value=0.063 Score=38.81 Aligned_cols=40 Identities=18% Similarity=0.058 Sum_probs=33.7
Q ss_pred cccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 23 ~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
...++++++.|.|.+ .||+++++.|...|.+ |+..++...
T Consensus 39 ~~~l~~~~vgiiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~ 78 (188)
T d2naca1 39 AYDLEAMHVGTVAAG-RIGLAVLRRLAPFDVH--LHYTDRHRL 78 (188)
T ss_dssp CCCCTTCEEEEECCS-HHHHHHHHHHGGGTCE--EEEECSSCC
T ss_pred ceeccccceeecccc-ccchhhhhhhhccCce--EEEEeeccc
Confidence 346789999999965 7999999999999997 888887643
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.14 E-value=0.1 Score=40.73 Aligned_cols=76 Identities=13% Similarity=0.169 Sum_probs=50.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh--hcCCCceeEEEecCCChHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK--NRFPERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~--~~~~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
.++||+||-.|++.|+ ++..+++.|++ .|+.++.++. .....+.. .....++.++..|+.+.+.
T Consensus 31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~-~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~--------- 96 (316)
T d1oria_ 31 LFKDKVVLDVGSGTGI---LCMFAAKAGAR-KVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL--------- 96 (316)
T ss_dssp HHTTCEEEEETCTTSH---HHHHHHHTTCS-EEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC---------
T ss_pred cCCcCEEEEEecCCcH---HHHHHHHhCCC-EEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc---------
Confidence 3479999999999875 56678888987 7988987754 33333322 2334578888888766431
Q ss_pred HHcCCccEEEEcc
Q 026924 103 EKYGSLNLLINAS 115 (231)
Q Consensus 103 ~~~g~id~lv~~a 115 (231)
..++.|+++...
T Consensus 97 -~~~~~D~ivs~~ 108 (316)
T d1oria_ 97 -PVEKVDIIISEW 108 (316)
T ss_dssp -SSSCEEEEEECC
T ss_pred -ccceeEEEeeee
Confidence 124677777654
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.06 E-value=0.45 Score=32.41 Aligned_cols=39 Identities=21% Similarity=0.005 Sum_probs=31.0
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
++.|+|+ |.+|.++|..++..|.-..+++.|.+++..+.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g 40 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG 40 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHH
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhH
Confidence 4677886 99999999999988753369999988766554
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=92.80 E-value=0.052 Score=36.53 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=45.4
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCcc
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN 109 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~id 109 (231)
-++|.|. |.+|+.+++.|. |.. +++++.+++..+.+.. ..+.++..|.++++.++++ ...+-+
T Consensus 2 HivI~G~-g~~g~~l~~~L~--~~~--i~vi~~d~~~~~~~~~------~~~~~i~Gd~~~~~~L~~a------~i~~A~ 64 (129)
T d2fy8a1 2 HVVICGW-SESTLECLRELR--GSE--VFVLAEDENVRKKVLR------SGANFVHGDPTRVSDLEKA------NVRGAR 64 (129)
T ss_dssp CEEEESC-CHHHHHHHHTSC--GGG--EEEEESCTTHHHHHHH------TTCEEEESCTTSHHHHHHT------TCTTCS
T ss_pred EEEEECC-CHHHHHHHHHHc--CCC--CEEEEcchHHHHHHHh------cCccccccccCCHHHHHHh------hhhcCc
Confidence 4778875 689999999984 555 5666777665443321 3567888999998765431 234567
Q ss_pred EEEEcc
Q 026924 110 LLINAS 115 (231)
Q Consensus 110 ~lv~~a 115 (231)
.+|...
T Consensus 65 ~vi~~~ 70 (129)
T d2fy8a1 65 AVIVNL 70 (129)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 776444
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=92.75 E-value=0.013 Score=44.17 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=33.3
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~ 68 (231)
+++||+++|-|-+ ..|..+|+.|.+.|++ |+..+.+....+
T Consensus 36 ~l~g~~v~IqG~G-nVG~~~a~~L~~~Gak--vv~~d~~~~~~~ 76 (230)
T d1leha1 36 SLEGLAVSVQGLG-NVAKALCKKLNTEGAK--LVVTDVNKAAVS 76 (230)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHHHHH
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEeecccHHHHH
Confidence 6799999998765 7999999999999997 777776554433
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=92.75 E-value=0.078 Score=36.99 Aligned_cols=37 Identities=22% Similarity=0.071 Sum_probs=31.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.||+++|.||+ -.|..+|..|.+.|.++.|.++++++
T Consensus 1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 47899999987 68999999999998765688887765
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=92.40 E-value=0.04 Score=38.33 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=32.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
.+.+.|+ |.+|.++++.|++.|.+ .|++.+|+++..+.+.+
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~ 42 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEK 42 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhh
Confidence 3667766 79999999999998844 59999999877666544
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=92.22 E-value=0.18 Score=35.64 Aligned_cols=76 Identities=24% Similarity=0.213 Sum_probs=52.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+..+++|.|++ --|+.-++...+.|++ |.+.|.+.+.++.+..... ..+.+ -.++++.+++.+.
T Consensus 31 ~pa~V~ViGaG-vaG~~A~~~A~~lGA~--V~~~D~~~~~l~~l~~~~~---~~~~~---~~~~~~~l~~~~~------- 94 (168)
T d1pjca1 31 KPGKVVILGGG-VVGTEAAKMAVGLGAQ--VQIFDINVERLSYLETLFG---SRVEL---LYSNSAEIETAVA------- 94 (168)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHG---GGSEE---EECCHHHHHHHHH-------
T ss_pred CCcEEEEECCC-hHHHHHHHHHhhCCCE--EEEEeCcHHHHHHHHHhhc---cccee---ehhhhhhHHHhhc-------
Confidence 45679999886 6889999999999997 8888998877766555432 33332 2345555544333
Q ss_pred CccEEEEccccC
Q 026924 107 SLNLLINASGIL 118 (231)
Q Consensus 107 ~id~lv~~ag~~ 118 (231)
.-|++|..+-+.
T Consensus 95 ~aDivI~aalip 106 (168)
T d1pjca1 95 EADLLIGAVLVP 106 (168)
T ss_dssp TCSEEEECCCCT
T ss_pred cCcEEEEeeecC
Confidence 469999988654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=92.22 E-value=0.2 Score=35.21 Aligned_cols=84 Identities=13% Similarity=0.147 Sum_probs=51.0
Q ss_pred EEEEecCCCchhHHHHHHHHhc-CCccEEEEeecCCCC-cc-chhh-------------hhhcCCCceeEEEecCCChHH
Q 026924 30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNG-AT-GLLD-------------LKNRFPERLDVLQLDLTVEST 93 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~-G~~~~vi~~~r~~~~-~~-~~~~-------------~~~~~~~~v~~~~~Dls~~~~ 93 (231)
++.|.|++|.+|+++++...+. +++ .+-..++.... .. ++.+ .....-.... +-.|++.++.
T Consensus 6 kI~i~Ga~GrMG~~i~~~i~~~~~~~-lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~ 83 (162)
T d1diha1 6 RVAIAGAGGRMGRQLIQAALALEGVQ-LGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG 83 (162)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEE-CCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence 5999999999999999999875 555 23333443211 00 0000 0001111222 4489999999
Q ss_pred HHHHHHHHHHHcCCccEEEEcccc
Q 026924 94 IEASAKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 94 v~~~~~~~~~~~g~id~lv~~ag~ 117 (231)
+...++...+. ++.+|+-..|+
T Consensus 84 ~~~~~~~a~~~--~~~~ViGTTG~ 105 (162)
T d1diha1 84 TLNHLAFCRQH--GKGMVIGTTGF 105 (162)
T ss_dssp HHHHHHHHHHT--TCEEEECCCCC
T ss_pred HHHHHHHHHhc--cceeEEecCCC
Confidence 99888876654 67777755553
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.04 E-value=0.2 Score=34.51 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=52.4
Q ss_pred cccCeEEEEecCCCc-hhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~g-IG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++|+.+|=.|+++| +|. .++.+|++ +|+.++.+.+..+.+.+-.+..+ .++..+..|..+ ++
T Consensus 12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~-~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l--- 77 (152)
T d2esra1 12 YFNGGRVLDLFAGSGGLAI----EAVSRGMS-AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI--- 77 (152)
T ss_dssp CCCSCEEEEETCTTCHHHH----HHHHTTCC-EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---
T ss_pred hCCCCeEEEcCCccCHHHH----HHHHhCcc-eeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---
Confidence 467888887777654 554 45677887 79999999877776555444333 468888888522 22
Q ss_pred HHHcCCccEEEEccc
Q 026924 102 KEKYGSLNLLINASG 116 (231)
Q Consensus 102 ~~~~g~id~lv~~ag 116 (231)
.....+.|+++.++.
T Consensus 78 ~~~~~~fDiIf~DPP 92 (152)
T d2esra1 78 DCLTGRFDLVFLDPP 92 (152)
T ss_dssp HHBCSCEEEEEECCS
T ss_pred cccccccceeEechh
Confidence 223357899987764
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=91.92 E-value=1.3 Score=34.32 Aligned_cols=81 Identities=7% Similarity=-0.028 Sum_probs=53.8
Q ss_pred cCeEEEEecCC-CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc--C-CCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--F-PERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas-~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~--~-~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+|+++|=..+. |+.+. +++..|+. .|+.++.+....+...+-.+. . ..++.++..|+- ++++...
T Consensus 144 ~g~~VLdlf~~~G~~sl----~aa~~ga~-~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~ 212 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSV----AAAMGGAM-ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR 212 (317)
T ss_dssp BTCEEEEETCTTTHHHH----HHHHTTBS-EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred CCCceeecCCCCcHHHH----HHHhCCCc-eEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence 57888866664 55443 34567887 699999999888775544332 2 246888888872 3344444
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
++..+.|++|..+..+
T Consensus 213 ~~~~~fD~Ii~DPP~f 228 (317)
T d2b78a2 213 RHHLTYDIIIIDPPSF 228 (317)
T ss_dssp HTTCCEEEEEECCCCC
T ss_pred hhcCCCCEEEEcChhh
Confidence 4556899999997644
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.90 E-value=1 Score=29.39 Aligned_cols=83 Identities=23% Similarity=0.183 Sum_probs=53.2
Q ss_pred eEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 29 GVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 29 k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
|++.|.|+| +..|..+.+.|.+.|++ |+.+..+.+.... ....+...+..+.... =....+.+.++++++.+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~--V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~ 78 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVE 78 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCE--EEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHh
Confidence 689999998 57999999999999997 7777655443332 2222333344444332 22456778888888766
Q ss_pred HcCCccEEEEccc
Q 026924 104 KYGSLNLLINASG 116 (231)
Q Consensus 104 ~~g~id~lv~~ag 116 (231)
. .+..++...|
T Consensus 79 ~--g~k~v~~~~g 89 (116)
T d1y81a1 79 A--GFKKLWFQPG 89 (116)
T ss_dssp T--TCCEEEECTT
T ss_pred c--CCceEEeccc
Confidence 4 3555555444
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.79 E-value=0.5 Score=36.82 Aligned_cols=81 Identities=10% Similarity=0.088 Sum_probs=54.2
Q ss_pred cCeEEEEecCC-CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 27 ~~k~~LVtGas-~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
+|+++|=.++. |+.+.+ ++..|+. .|+.++.++...+...+-.+..+ .++.++..|+. +....+.+
T Consensus 145 ~g~~VLDl~~g~G~~si~----~a~~ga~-~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~ 213 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIH----AAIAGAD-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQK 213 (324)
T ss_dssp TTCEEEETTCTTTHHHHH----HHHTTCS-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHH
T ss_pred CCCeeecccCcccchhhh----hhhcCCc-EEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHh
Confidence 47888888775 444443 4566876 79999999888777655444333 36777777763 22344444
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
...+.|+||.++...
T Consensus 214 ~~~~fD~Vi~DpP~~ 228 (324)
T d2as0a2 214 KGEKFDIVVLDPPAF 228 (324)
T ss_dssp TTCCEEEEEECCCCS
T ss_pred ccCCCCchhcCCccc
Confidence 446899999998754
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=91.77 E-value=0.084 Score=37.50 Aligned_cols=61 Identities=10% Similarity=0.059 Sum_probs=44.2
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC-------------CCceeEEEecCCChH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-------------PERLDVLQLDLTVES 92 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~Dls~~~ 92 (231)
+|++||..|++.| ..+..|+++|++ |..+|-++...+...+..+.. +....++.+|..+..
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~--V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 93 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYH--VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 93 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCE--EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCc--eEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence 5789999999876 377799999996 999999887766655443221 334567778876653
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=91.65 E-value=0.19 Score=39.37 Aligned_cols=81 Identities=12% Similarity=0.075 Sum_probs=53.8
Q ss_pred ccCeEEEEecCC-CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas-~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
.+|+++|=.++. |+.+.+ ++..|. .|+.+|.++...+.+.+..+..+ .++.++..|..+. .+.+.+
T Consensus 144 ~~g~rVLDl~~gtG~~s~~----~a~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~ 211 (318)
T d1wxxa2 144 FRGERALDVFSYAGGFALH----LALGFR--EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEK 211 (318)
T ss_dssp CCEEEEEEETCTTTHHHHH----HHHHEE--EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHH
T ss_pred hCCCeeeccCCCCcHHHHH----HHhcCC--cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHh
Confidence 478888887776 444433 444445 49999999888887665555444 3678888776332 334444
Q ss_pred HcCCccEEEEccccC
Q 026924 104 KYGSLNLLINASGIL 118 (231)
Q Consensus 104 ~~g~id~lv~~ag~~ 118 (231)
...+.|.||.++...
T Consensus 212 ~~~~fD~Vi~DpP~~ 226 (318)
T d1wxxa2 212 EGERFDLVVLDPPAF 226 (318)
T ss_dssp TTCCEEEEEECCCCS
T ss_pred hhcCCCEEEEcCCcc
Confidence 446899999998654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.55 E-value=0.14 Score=34.03 Aligned_cols=35 Identities=26% Similarity=0.262 Sum_probs=29.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
+|.++|.||+ .+|..+|..|.+.|.+ |.++.+++.
T Consensus 30 ~~~vvIIGgG-~iG~E~A~~l~~~g~~--Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVGGG-VIGLELAATARTAGVH--VSLVETQPR 64 (121)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred CCeEEEECcc-hhHHHHHHHhhcccce--EEEEeeccc
Confidence 5788888875 8999999999999997 777777664
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.18 E-value=0.26 Score=36.22 Aligned_cols=38 Identities=11% Similarity=0.055 Sum_probs=30.9
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
++++||..|++.| ..+..|++.|++ |+.+|-++...+.
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~--V~gvD~S~~ai~~ 82 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHS--VVGVEISELGIQE 82 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCc--EEEEeCCHHHHHH
Confidence 5779999999876 458889999997 9999988766554
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.15 E-value=0.16 Score=33.73 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=29.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
++|.++|.||+ .+|..+|..|++.|.+ |.+..+.+.
T Consensus 29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~--Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGSG-YIGIEAAEAFAKAGKK--VTVIDILDR 64 (123)
T ss_dssp TCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred CCCEEEEECCh-HHHHHHHHHhhccceE--EEEEEecCc
Confidence 46788888765 8999999999999998 777777553
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.02 E-value=0.11 Score=36.57 Aligned_cols=38 Identities=32% Similarity=0.382 Sum_probs=33.1
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.-+.||+++|.|=+ -+|+.+|+.|...|++ |++++.++
T Consensus 20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~--V~v~e~dp 57 (163)
T d1li4a1 20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGAR--VIITEIDP 57 (163)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCH
T ss_pred ceecCCEEEEeccc-cccHHHHHHHHhCCCe--eEeeeccc
Confidence 35789999999866 7999999999999997 88888765
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.98 E-value=1.9 Score=30.75 Aligned_cols=36 Identities=14% Similarity=-0.002 Sum_probs=28.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+.|. |.|-+|+.+|..|+++|++ |+..|.+++..+.
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~--V~g~D~n~~~i~~ 38 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHE--VIGVDVSSTKIDL 38 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCc--EEEEeCCHHHHHH
Confidence 5566 5668999999999999997 8899987655443
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.98 E-value=0.45 Score=31.47 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=48.7
Q ss_pred CeEEEEecCCC-chh---------HHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHH
Q 026924 28 GGVSLVQGASR-GIG---------LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS 97 (231)
Q Consensus 28 ~k~~LVtGas~-gIG---------~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~ 97 (231)
.|++||.|++. .|| ...++.|-+.|++ ++++..|++....-.+. .+++.+-+. ..+.+.++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~--~IliN~NPeTVstd~d~----aD~lYfepl---t~e~v~~I 74 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYE--TIMVNCNPETVSTDYDT----SDRLYFEPV---TLEDVLEI 74 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCE--EEEECCCTTSSTTSTTS----SSEEECCCC---SHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCe--EEEEecChhhhhcChhh----cCceEEccC---CHHHHHHH
Confidence 56799998863 444 4677888899997 88888887665432111 234544444 33556665
Q ss_pred HHHHHHHcCCccEEEEcccc
Q 026924 98 AKSIKEKYGSLNLLINASGI 117 (231)
Q Consensus 98 ~~~~~~~~g~id~lv~~ag~ 117 (231)
+++- ++|+++...|.
T Consensus 75 i~~E-----~p~~ii~~~GG 89 (121)
T d1a9xa4 75 VRIE-----KPKGVIVQYGG 89 (121)
T ss_dssp HHHH-----CCSEEECSSST
T ss_pred HHHh-----CCCEEEeehhh
Confidence 5553 68898866664
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.95 E-value=0.068 Score=45.09 Aligned_cols=37 Identities=16% Similarity=0.067 Sum_probs=31.8
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
++++..|+|.|+ ||+|..+++-|+..|.. .+.++|.+
T Consensus 22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg-~itivD~d 58 (529)
T d1yova1 22 ALESAHVCLINA-TATGTEILKNLVLPGIG-SFTIIDGN 58 (529)
T ss_dssp HHHHCEEEECCC-SHHHHHHHHHHHTTTCS-EEEEECCS
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHhcCC-EEEEEcCC
Confidence 567789999997 68999999999999987 78887753
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=90.92 E-value=0.33 Score=37.00 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=48.1
Q ss_pred eEEEEecCCC-chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 29 GVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 29 k~~LVtGas~-gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
++++-.|+++ -|+.+++ +. ..+ .|+.+|.++...+....-.+..+ .++.+...|+.+. ..+.+
T Consensus 112 ~~vld~g~GsG~i~~~la-~~--~~~--~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~ 177 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-KF--SDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF 177 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-HH--SSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT
T ss_pred cEEEEeeeeeehhhhhhh-hc--ccc--eeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc
Confidence 4555455554 4555554 32 345 49999998877776544333333 3677778888543 22345
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
+++|++|.|+.+.
T Consensus 178 ~~fDlIVsNPPYI 190 (271)
T d1nv8a_ 178 ASIEMILSNPPYV 190 (271)
T ss_dssp TTCCEEEECCCCB
T ss_pred CcccEEEEccccc
Confidence 7899999999865
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=90.60 E-value=0.13 Score=38.97 Aligned_cols=36 Identities=22% Similarity=0.196 Sum_probs=29.9
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r 62 (231)
+++||+++|.| .|..|+.+++.|.+.|++ .|.+.|.
T Consensus 33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gak-vvavsD~ 68 (255)
T d1bgva1 33 TLVGKTVALAG-FGNVAWGAAKKLAELGAK-AVTLSGP 68 (255)
T ss_dssp CSTTCEEEECC-SSHHHHHHHHHHHHHTCE-EEEEEET
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCe-EEEEecC
Confidence 67899999998 689999999999999998 3444443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=90.56 E-value=0.58 Score=33.33 Aligned_cols=45 Identities=20% Similarity=0.084 Sum_probs=36.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhh
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK 74 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~ 74 (231)
+.-.++|.|++ -.|+.-++-....|++ |.+.|.+...++.+.++.
T Consensus 28 ~pa~VvViGaG-vaG~~Aa~~A~~lGA~--V~v~D~~~~~~~~l~~l~ 72 (183)
T d1l7da1 28 PPARVLVFGVG-VAGLQAIATAKRLGAV--VMATDVRAATKEQVESLG 72 (183)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCSTTHHHHHHTT
T ss_pred CCcEEEEEcCc-HHHHHHHHHHHHcCCE--EEEEeccHHHHHHHHHhh
Confidence 34578899886 6899999999999996 999999988877766553
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.37 E-value=0.061 Score=38.53 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=26.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
++.|.|+ |..|.++|..|++.|.+ |.+.+|+
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~--V~l~~r~ 32 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNE--VRIWGTE 32 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCE--EEEECCG
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCE--EEEEEec
Confidence 5778887 58999999999999997 8887774
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=90.26 E-value=0.053 Score=39.29 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=31.1
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccch
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL 70 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~ 70 (231)
++.|.|++ ..|.++|..|++.|.+ |.+.+|+++..+.+
T Consensus 9 KI~ViGaG-~wGtAlA~~La~~g~~--V~l~~r~~~~~~~i 46 (189)
T d1n1ea2 9 KAVVFGSG-AFGTALAMVLSKKCRE--VCVWHMNEEEVRLV 46 (189)
T ss_dssp EEEEECCS-HHHHHHHHHHHTTEEE--EEEECSCHHHHHHH
T ss_pred eEEEECCC-HHHHHHHHHHHHcCCe--EEEEEecHHHHHHH
Confidence 57888876 6999999999999987 88888887655544
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=90.19 E-value=1.7 Score=28.85 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=56.1
Q ss_pred ccCeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCCCCccc--hhhhhhcCCCceeEEEecCCChHHHHHHHHH
Q 026924 26 WKGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKS 100 (231)
Q Consensus 26 ~~~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~ 100 (231)
|+-|++.|.|+| +..|..+.+.|.+.|.. .|+.+..+...... ....+...+..+.....= ...+.+.+++++
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g-~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~-vp~~~~~~~~~~ 83 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKG-KVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIV-VPKRFVKDTLIQ 83 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSS-EEEEECSSCSEETTEECBSSTTSCSSCCSEEEEC-SCHHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCC-cEEEeccCccccCCeEeecchhhcCCCCceEEEe-cChHHhHHHHHH
Confidence 456899999998 78999999998776622 48777665544332 222333334444433332 356788888888
Q ss_pred HHHHcCCccEEEEccccC
Q 026924 101 IKEKYGSLNLLINASGIL 118 (231)
Q Consensus 101 ~~~~~g~id~lv~~ag~~ 118 (231)
..+. |--.+++..+|+.
T Consensus 84 ~~~~-g~~~~vi~s~Gf~ 100 (129)
T d2csua1 84 CGEK-GVKGVVIITAGFG 100 (129)
T ss_dssp HHHH-TCCEEEECCCSST
T ss_pred HHHc-CCCEEEEeccccc
Confidence 8765 3334556555553
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=89.97 E-value=0.44 Score=35.90 Aligned_cols=74 Identities=19% Similarity=0.178 Sum_probs=52.2
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
.+|+++|=.|+++|+ ++..+++.|++ |+.+|.++...+...+..+..+.+..++..|+.+ . ...
T Consensus 119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~--V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~----------~-~~~ 182 (254)
T d2nxca1 119 RPGDKVLDLGTGSGV---LAIAAEKLGGK--ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA----------A-LPF 182 (254)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHTTCE--EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH----------H-GGG
T ss_pred CccCEEEEcccchhH---HHHHHHhcCCE--EEEEECChHHHHHHHHHHHHcCCceeEEeccccc----------c-ccc
Confidence 468899999999886 23456778886 8899999988887665555556667777766411 1 123
Q ss_pred CCccEEEEcc
Q 026924 106 GSLNLLINAS 115 (231)
Q Consensus 106 g~id~lv~~a 115 (231)
++.|+++.|.
T Consensus 183 ~~fD~V~ani 192 (254)
T d2nxca1 183 GPFDLLVANL 192 (254)
T ss_dssp CCEEEEEEEC
T ss_pred cccchhhhcc
Confidence 6789998764
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.89 E-value=0.24 Score=32.33 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=28.4
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
|.++|.||+ .+|..+|..|.+.|.+ |.++.|.+.
T Consensus 23 ~~v~IiGgG-~ig~E~A~~l~~~G~~--Vtlve~~~~ 56 (117)
T d1ebda2 23 KSLVVIGGG-YIGIELGTAYANFGTK--VTILEGAGE 56 (117)
T ss_dssp SEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred CeEEEECCC-ccceeeeeeecccccE--EEEEEecce
Confidence 678888876 8999999999999998 777777654
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=89.86 E-value=0.19 Score=36.96 Aligned_cols=34 Identities=29% Similarity=0.218 Sum_probs=28.3
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.|.|+|.||+ -.|.+.|..|+++|++ |.+++|+.
T Consensus 6 ~~kVvVIGaG-iaGl~~A~~L~~~G~~--V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGSG-VIGLSSALILARKGYS--VHILARDL 39 (268)
T ss_dssp SCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSC
T ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCC--EEEEeCCC
Confidence 4568888876 6899999999999997 88888754
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.74 E-value=0.37 Score=37.57 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=48.8
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh--cCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
++|++||-.|++.|+ ++..++++|++ .|+.++.++ ..+...+..+ ....++.++..|+.+..-
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~-~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~---------- 101 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAK-HVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL---------- 101 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCS-EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCC-EEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------
Confidence 579999999999874 45677888987 788888774 3333333222 224478888888765420
Q ss_pred HcCCccEEEEcc
Q 026924 104 KYGSLNLLINAS 115 (231)
Q Consensus 104 ~~g~id~lv~~a 115 (231)
.-++.|+++...
T Consensus 102 ~~~~~D~i~se~ 113 (328)
T d1g6q1_ 102 PFPKVDIIISEW 113 (328)
T ss_dssp SSSCEEEEEECC
T ss_pred cccceeEEEEEe
Confidence 113577777654
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=89.70 E-value=0.17 Score=37.82 Aligned_cols=34 Identities=24% Similarity=0.047 Sum_probs=27.5
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+|+|+|.||+ -=|++.|.+|++.|++ |.+..++.
T Consensus 1 ~KkV~IIGaG-~aGL~aA~~La~~G~~--V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAG-VSGLAAAYKLKIHGLN--VTVFEAEG 34 (373)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHTTSCE--EEEECSSS
T ss_pred CCEEEEECcC-HHHHHHHHHHHhCCCC--EEEEeCCC
Confidence 5788999876 5678899999999997 77777654
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=89.51 E-value=0.29 Score=32.07 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=29.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
++|.++|.||+ -+|..+|..|++.|.+ |.++.+.+.
T Consensus 21 ~~~~vvVvGgG-~ig~E~A~~l~~~g~~--vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGGS-KTAVEYGCFFNATGRR--TVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCT
T ss_pred CCCEEEEECCC-HHHHHHHHHHHhcchh--heEeeccch
Confidence 46788888875 8999999999999997 777777653
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=89.47 E-value=0.16 Score=37.70 Aligned_cols=73 Identities=11% Similarity=-0.042 Sum_probs=53.1
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG 106 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g 106 (231)
+++++|=.|++.| .++..|+++|++ |+.+|-++...+.+.+.....+.++.++..|+.+... -+
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~--v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~ 104 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYE--VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KN 104 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CS
T ss_pred CCCEEEEeCCCCC---ccchhhcccceE--EEEEeeccccccccccccccccccchheehhhhhccc-----------cc
Confidence 4678999999876 446678899996 9999999877776666555556688889888755320 13
Q ss_pred CccEEEEcc
Q 026924 107 SLNLLINAS 115 (231)
Q Consensus 107 ~id~lv~~a 115 (231)
..|.+++.-
T Consensus 105 ~fD~I~~~~ 113 (251)
T d1wzna1 105 EFDAVTMFF 113 (251)
T ss_dssp CEEEEEECS
T ss_pred ccchHhhhh
Confidence 578887653
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=89.47 E-value=0.21 Score=37.45 Aligned_cols=33 Identities=30% Similarity=0.251 Sum_probs=28.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEe
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT 60 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~ 60 (231)
+++||+++|-| .|..|..+|+.|.+.|++ |+.+
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gak--vv~v 60 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAK--VIAV 60 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCE--EEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCe--EEEe
Confidence 67899999997 678999999999999997 5443
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=89.42 E-value=0.09 Score=36.47 Aligned_cols=39 Identities=8% Similarity=0.067 Sum_probs=30.3
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhh
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~ 72 (231)
+.+. |.|.+|.++++.|.+.|++ +++.+|+.++.+.+.+
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~--i~v~~r~~~~~~~l~~ 41 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHE--LIISGSSLERSKEIAE 41 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCE--EEEECSSHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCe--EEEEcChHHhHHhhcc
Confidence 4555 4568999999999999997 8888998766655433
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=89.40 E-value=0.13 Score=37.16 Aligned_cols=81 Identities=7% Similarity=0.081 Sum_probs=59.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCCc
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL 108 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~i 108 (231)
..+=+|-|+||...++.+.+ . +.+ |+..|++++..+...+..+.++.++.++..+.++...+ .... ..+.+
T Consensus 26 ~~lD~t~G~Gghs~~il~~~-~-~~~--vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~v 96 (192)
T d1m6ya2 26 IILDCTVGEGGHSRAILEHC-P-GCR--IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKV 96 (192)
T ss_dssp EEEETTCTTSHHHHHHHHHC-T-TCE--EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCE
T ss_pred EEEEecCCCcHHHHHHHhcC-C-CCe--EEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCc
Confidence 33445777888888888776 3 354 99999999888887777777788999999988765432 2221 13689
Q ss_pred cEEEEccccC
Q 026924 109 NLLINASGIL 118 (231)
Q Consensus 109 d~lv~~ag~~ 118 (231)
|+++...|..
T Consensus 97 dgIl~DlGvS 106 (192)
T d1m6ya2 97 DGILMDLGVS 106 (192)
T ss_dssp EEEEEECSCC
T ss_pred ceeeeccchh
Confidence 9999988864
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.32 E-value=0.16 Score=36.01 Aligned_cols=35 Identities=11% Similarity=0.011 Sum_probs=28.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+|+|+|.||+ -.|+..|..|+++|++ -|.+..++.
T Consensus 4 ~~kVaIIGaG-paGl~aA~~l~~~G~~-~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGAG-PASISCASFLARLGYS-DITIFEKQE 38 (196)
T ss_dssp GCCEEEECCS-HHHHHHHHHHHHTTCC-CEEEEESSS
T ss_pred CCEEEEECCh-HHHHHHHHHHHHCCCC-eEEEEEecC
Confidence 5678888876 7999999999999984 266677754
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.24 E-value=0.32 Score=33.35 Aligned_cols=36 Identities=11% Similarity=0.073 Sum_probs=27.6
Q ss_pred CeEEEEe-cCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 28 GGVSLVQ-GASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 28 ~k~~LVt-Gas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
++.++|. .+++.||.++|..|++.|.+ |.++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~--Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHE--VTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCE--EEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCe--EEEEecCCc
Confidence 4455554 46689999999999999997 777777553
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=89.18 E-value=0.27 Score=32.29 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=28.6
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.|.++|.||+ .+|..+|..|++.|.+ |.++.|.+.
T Consensus 22 p~~v~IiGgG-~iG~E~A~~l~~~g~~--Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGSG-YIAVELINVIKRLGID--SYIFARGNR 56 (117)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHTTTCE--EEEECSSSS
T ss_pred CCEEEEECCc-hHHHHHHHHHHhcccc--ceeeehhcc
Confidence 3678888775 8999999999999997 777777653
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.17 E-value=0.27 Score=32.61 Aligned_cols=34 Identities=29% Similarity=0.312 Sum_probs=28.8
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
|.++|.||+ .||..+|..|++.|.+ |.++.|++.
T Consensus 23 k~vvIvGgG-~iG~E~A~~l~~~G~~--Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGAG-YIAVEMAGILSALGSK--TSLMIRHDK 56 (125)
T ss_dssp SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred CEEEEEcCC-ccHHHHHHHHhcCCcE--EEEEeeccc
Confidence 678888876 7999999999999997 777788654
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=89.07 E-value=0.54 Score=32.63 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=28.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
+++.++|.||+ .+|..+|..|.+.|.+++|+...+.
T Consensus 2 ~~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 2 ANDNVVIVGTG-LAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEECCc-HHHHHHHHHHHHcCCceEEEEecCc
Confidence 35678888775 8999999999999998677666553
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=88.97 E-value=0.29 Score=31.96 Aligned_cols=34 Identities=21% Similarity=0.042 Sum_probs=27.6
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
|.++|.||+ .+|..+|..|.+.|.+ |.++.|.+.
T Consensus 22 ~~vvIiGgG-~ig~E~A~~l~~~G~~--Vtlve~~~~ 55 (116)
T d1gesa2 22 ERVAVVGAG-YIGVELGGVINGLGAK--THLFEMFDA 55 (116)
T ss_dssp SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred CEEEEECCC-hhhHHHHHHhhccccE--EEEEeecch
Confidence 567777765 8999999999999997 777777654
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=88.92 E-value=0.44 Score=32.77 Aligned_cols=82 Identities=12% Similarity=0.047 Sum_probs=48.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhc------CCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR------FPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~------~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+-+.|- |.+|..+|++|++.|+ +++.+|+.++.+.+.+.... .-.+...+-..+.+.+.+....+.+.+.
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~ 78 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFP---TLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY 78 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSC---EEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred EEEEeH-HHHHHHHHHHHHhCCC---EEEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccc
Confidence 456665 7899999999999887 44566765544433221110 0112333444566677787777777665
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
..+-..+|.+.-
T Consensus 79 ~~~~~~iid~sT 90 (156)
T d2cvza2 79 LREGTYWVDATS 90 (156)
T ss_dssp CCTTEEEEECSC
T ss_pred cccccccccccc
Confidence 555566655543
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=88.91 E-value=0.1 Score=38.88 Aligned_cols=76 Identities=9% Similarity=-0.068 Sum_probs=54.6
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
..+++++|=.|++.|. ++..|+++|.+ |+.+|.++..++.+.+.....+.++.++..|+.+.+ .
T Consensus 35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~--v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~ 98 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGN---LTENLCPKFKN--TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------I 98 (246)
T ss_dssp TCCTTEEEEETCTTST---THHHHGGGSSE--EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------C
T ss_pred CCCCCeEEEEeCcCCH---HHHHHHHhCCc--cEeeccchhhhhhccccccccCccceeeccchhhhc-----------c
Confidence 3456889999999775 77888999996 899999887766655555555667888888875532 1
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
.++.|++++.-+
T Consensus 99 ~~~fD~i~~~~~ 110 (246)
T d1y8ca_ 99 NRKFDLITCCLD 110 (246)
T ss_dssp SCCEEEEEECTT
T ss_pred cccccccceeee
Confidence 146788876433
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=88.86 E-value=0.32 Score=36.26 Aligned_cols=35 Identities=23% Similarity=0.109 Sum_probs=27.2
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEee
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATC 61 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~ 61 (231)
+++|++++|-| .|..|+.+++.|.+ .|++ .|.+.+
T Consensus 28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~-vv~vsd 63 (234)
T d1b26a1 28 DPKKATVAVQG-FGNVGQFAALLISQELGSK-VVAVSD 63 (234)
T ss_dssp CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCE-EEEEEE
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCc-eEEeec
Confidence 57899998876 77999999999975 6997 333443
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.81 E-value=0.25 Score=32.60 Aligned_cols=34 Identities=32% Similarity=0.418 Sum_probs=27.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+|.++|.||+ .+|..+|..|++.|.+ |.++.+++
T Consensus 32 ~~~vvIiGgG-~iG~E~A~~l~~~g~~--Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGGG-FIGLELAGNLAEAGYH--VKLIHRGA 65 (122)
T ss_dssp HSEEEEEECS-HHHHHHHHHHHHTTCE--EEEECSSS
T ss_pred CCcEEEECCc-HHHHHHHHHhhcccce--EEEEeccc
Confidence 4678887765 8999999999999997 77777754
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=88.59 E-value=0.22 Score=34.25 Aligned_cols=36 Identities=14% Similarity=0.109 Sum_probs=27.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccc
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~ 69 (231)
+-|.| .|.+|+++++.|+++|++ |++.+++......
T Consensus 3 IgiIG-~G~mG~~ia~~l~~~g~~--v~~~~~~~~~~~~ 38 (152)
T d1i36a2 3 VGFIG-FGEVAQTLASRLRSRGVE--VVTSLEGRSPSTI 38 (152)
T ss_dssp EEEES-CSHHHHHHHHHHHHTTCE--EEECCTTCCHHHH
T ss_pred EEEEc-HHHHHHHHHHHHHHCCCe--EEEEcCchhHHHH
Confidence 45554 589999999999999997 7777776655443
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=88.50 E-value=0.43 Score=31.29 Aligned_cols=34 Identities=26% Similarity=0.164 Sum_probs=27.7
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+.++|.||+ -||..+|..|++.|.+ |.+..+++
T Consensus 22 p~~i~IiG~G-~ig~E~A~~l~~~G~~--Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIGAG-VIGLELGSVWARLGAE--VTVLEAMD 55 (119)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSS
T ss_pred CCeEEEECCC-hHHHHHHHHHHHcCCc--eEEEEeec
Confidence 3668888876 8999999999999998 66666654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.49 E-value=0.32 Score=32.11 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=28.1
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
|.++|.||+ -||..+|..|.+.|.+ |.++.+++.
T Consensus 24 ~~~vIiG~G-~ig~E~A~~l~~lG~~--Vtii~~~~~ 57 (122)
T d1v59a2 24 KRLTIIGGG-IIGLEMGSVYSRLGSK--VTVVEFQPQ 57 (122)
T ss_dssp SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred CeEEEECCC-chHHHHHHHHHhhCcc--eeEEEeccc
Confidence 578888875 8999999999999997 777777553
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.09 E-value=0.26 Score=31.78 Aligned_cols=40 Identities=15% Similarity=0.132 Sum_probs=30.9
Q ss_pred ccccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 22 ~~~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+.+++||++||.|++ .=|.-+|..|+..+.+ +++..|+.
T Consensus 26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~--v~~~~~r~ 65 (107)
T d2gv8a2 26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKH--PIYQSLLG 65 (107)
T ss_dssp CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCS--SEEEECTT
T ss_pred chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCE--EEEEEecC
Confidence 3457899999999987 5788899999998887 45455543
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=88.00 E-value=1.6 Score=29.96 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=39.5
Q ss_pred eEEEEecCCCchhHHHHHHHHhc--CCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHH
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~--G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
|.+.|.|++|.||...-.-..++ .++ |+....+. ..+.+.++..++..+..+ +.|++....+.+.+
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~--v~~Lsa~~-N~~~L~~q~~~f~pk~v~----i~d~~~~~~l~~~l 69 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFR--VVALVAGK-NVTRMVEQCLEFSPRYAV----MDDEASAKLLKTML 69 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEE--EEEEEESS-CHHHHHHHHHHHCCSEEE----ESSHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcE--EEEEEecC-cHHHHHHHHHHHhhcccc----cccHHHHHHHHHHh
Confidence 57999999999999988877765 455 54444332 234455555554444433 33455444444444
|
| >d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=87.99 E-value=1.6 Score=33.37 Aligned_cols=86 Identities=13% Similarity=-0.004 Sum_probs=52.3
Q ss_pred EEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCC-------------------
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV------------------- 90 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~------------------- 90 (231)
..+|+..+|.-|.++|..-+..|.+ .+++...+.... ..+.++.+|.++..+.-+..+
T Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~~~~--k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~ 146 (318)
T d1v71a1 70 AGVLTFSSGNHAQAIALSAKILGIP-AKIIMPLDAPEA--KVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPP 146 (318)
T ss_dssp HCEEECCSSHHHHHHHHHHHHTTCC-EEEEEETTCCHH--HHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCS
T ss_pred ceeeeeccchhhHHHHHhhcccccc-eeecccccccHH--HHHHHHHcCCcEEeccCCchHHHHHHHHHHHhcCCEecCC
Confidence 3588889999999999999999998 445444433221 222233344444433322211
Q ss_pred ---h---HHHHHHHHHHHHHcCCccEEEEccccC
Q 026924 91 ---E---STIEASAKSIKEKYGSLNLLINASGIL 118 (231)
Q Consensus 91 ---~---~~v~~~~~~~~~~~g~id~lv~~ag~~ 118 (231)
+ +.......++.++++.+|.+|...|..
T Consensus 147 ~~~~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~G 180 (318)
T d1v71a1 147 YDHPHVLAGQGTAAKELFEEVGPLDALFVCLGGG 180 (318)
T ss_dssp SSSHHHHHHHTHHHHHHHHHHCCCSEEEEECSSS
T ss_pred ccccccccccchHHHHHHHhcCCCCEEEEcCCch
Confidence 1 123445666777778888888887743
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.94 E-value=0.36 Score=32.40 Aligned_cols=37 Identities=24% Similarity=0.189 Sum_probs=30.0
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
++|.++|.||+ -+|..+|..|.+.|.+ |.++.+.+..
T Consensus 34 ~~k~v~VIGgG-~iG~E~A~~l~~~g~~--Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGGG-YIGLEVAATAIKANMH--VTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSST
T ss_pred cCCEEEEECCc-hHHHHHHHHHHhhCcc--eeeeeecccc
Confidence 35778888765 8999999999999997 7777776543
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=87.76 E-value=0.36 Score=34.32 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=31.4
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.++|.++|.||+ --|++.|..|+++|++ |.+..++...
T Consensus 41 ~~~k~V~IIGaG-PAGL~AA~~la~~G~~--Vtl~E~~~~~ 78 (179)
T d1ps9a3 41 VQKKNLAVVGAG-PAGLAFAINAAARGHQ--VTLFDAHSEI 78 (179)
T ss_dssp SSCCEEEEECCS-HHHHHHHHHHHTTTCE--EEEEESSSSS
T ss_pred CCCcEEEEECcc-HHHHHHHHHHHhhccc--eEEEeccCcc
Confidence 357889999886 7899999999999997 8888886543
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.70 E-value=0.36 Score=37.22 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=29.8
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeec
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r 62 (231)
.+++||+++|-|- |..|..+|+.|.+.|++ .|.+.+.
T Consensus 32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gak-vv~vsD~ 68 (293)
T d1hwxa1 32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAK-CVAVGES 68 (293)
T ss_dssp SSSTTCEEEEECC-SHHHHHHHHHHHHTTCE-EEEEEET
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCE-EEEEEcc
Confidence 3679999999887 68999999999999998 3334443
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=87.57 E-value=0.59 Score=33.03 Aligned_cols=75 Identities=17% Similarity=0.215 Sum_probs=51.6
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC--CceeEEEecCCChHHHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
+|.++|=.|+++| .++..|++.+.+ |+.++.++...+...+..+..+ .++.++.+|. .+....
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~--V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda----------~~~~~~ 97 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRR--VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA----------PEALCK 97 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSE--EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH----------HHHHTT
T ss_pred CCCEEEEEECCeE---cccccccccceE--EEEecCCHHHHHHHHHHHHHcCCCcceEEEECch----------hhcccc
Confidence 5788888998866 334456666664 9999999888777665555444 5888888875 222223
Q ss_pred cCCccEEEEccc
Q 026924 105 YGSLNLLINASG 116 (231)
Q Consensus 105 ~g~id~lv~~ag 116 (231)
.+..|.++.+.+
T Consensus 98 ~~~~D~v~~~~~ 109 (186)
T d1l3ia_ 98 IPDIDIAVVGGS 109 (186)
T ss_dssp SCCEEEEEESCC
T ss_pred cCCcCEEEEeCc
Confidence 457899987654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=87.47 E-value=0.28 Score=36.65 Aligned_cols=31 Identities=23% Similarity=0.205 Sum_probs=26.6
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++|.||+ -.|.++|.+|+++|.+ |+++++++
T Consensus 7 vvIIGaG-i~Gls~A~~La~~G~~--V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGGG-IIGSAIAYYLAKENKN--TALFESGT 37 (276)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred EEEECcC-HHHHHHHHHHHHCCCc--EEEEeCCC
Confidence 7888775 7999999999999998 88888864
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.33 E-value=2.1 Score=32.93 Aligned_cols=80 Identities=5% Similarity=-0.083 Sum_probs=51.4
Q ss_pred cCeEEEEecCCC-chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhh--cC-CCceeEEEecCCChHHHHHHHHHHH
Q 026924 27 KGGVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RF-PERLDVLQLDLTVESTIEASAKSIK 102 (231)
Q Consensus 27 ~~k~~LVtGas~-gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~--~~-~~~v~~~~~Dls~~~~v~~~~~~~~ 102 (231)
+++.+|=..+.+ +++. .+++.|++ |+.+|.+....+...+-.+ .. ..++.++..|+ .+++++..
T Consensus 132 ~~~rVLdlf~~tG~~sl----~aa~~GA~--V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~ 199 (309)
T d2igta1 132 RPLKVLNLFGYTGVASL----VAAAAGAE--VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREE 199 (309)
T ss_dssp SCCEEEEETCTTCHHHH----HHHHTTCE--EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHH
T ss_pred CCCeEEEecCCCcHHHH----HHHhCCCe--EEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHh
Confidence 466777666654 4333 45567886 8889988877776543322 22 23678888776 33345555
Q ss_pred HHcCCccEEEEccccC
Q 026924 103 EKYGSLNLLINASGIL 118 (231)
Q Consensus 103 ~~~g~id~lv~~ag~~ 118 (231)
+...+.|+||.++..+
T Consensus 200 ~~~~~fD~IilDPP~f 215 (309)
T d2igta1 200 RRGSTYDIILTDPPKF 215 (309)
T ss_dssp HHTCCBSEEEECCCSE
T ss_pred hcCCCCCEEEECCCcc
Confidence 5556899999998654
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=87.26 E-value=0.4 Score=34.56 Aligned_cols=75 Identities=13% Similarity=0.043 Sum_probs=51.9
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHcCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS 107 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~g~ 107 (231)
+.++|=.|++.|. ++..|++.|++ |+.+|.++...+...+.....+..+..+..|..+.. ...+.
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~--v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~ 102 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFE--VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKT 102 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTC
T ss_pred CCEEEEECCCcch---hhhhHhhhhcc--cccccccccchhhhhhhhcccccccccccccccccc----------ccCcC
Confidence 4568999998776 56788889986 999999877766665555554566777777776532 11146
Q ss_pred ccEEEEcccc
Q 026924 108 LNLLINASGI 117 (231)
Q Consensus 108 id~lv~~ag~ 117 (231)
.|++++...+
T Consensus 103 fD~I~~~~~l 112 (226)
T d1ve3a1 103 FDYVIFIDSI 112 (226)
T ss_dssp EEEEEEESCG
T ss_pred ceEEEEecch
Confidence 7888876543
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.18 E-value=0.52 Score=36.22 Aligned_cols=24 Identities=25% Similarity=0.177 Sum_probs=19.4
Q ss_pred CCchhHHHHHHHHhcCCccEEEEeec
Q 026924 37 SRGIGLEFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 37 s~gIG~aia~~l~~~G~~~~vi~~~r 62 (231)
||..|.++|+.|+.+|+. |+++.+
T Consensus 45 SGk~G~alA~~~~~~Ga~--V~li~g 68 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYG--VLFLYR 68 (290)
T ss_dssp CCHHHHHHHHHHHHTTCE--EEEEEE
T ss_pred chHHHHHHHHHHHHcCCE--EEEEec
Confidence 357899999999999998 555543
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.90 E-value=2.1 Score=28.98 Aligned_cols=35 Identities=9% Similarity=-0.051 Sum_probs=24.6
Q ss_pred EEEEecCCCchhHHHHHHHHhcC-C-ccEEEEeecCC
Q 026924 30 VSLVQGASRGIGLEFAKQLLEKN-D-KGCVIATCRNP 64 (231)
Q Consensus 30 ~~LVtGas~gIG~aia~~l~~~G-~-~~~vi~~~r~~ 64 (231)
.+-|.||+|-.|+.+.+.|+++. + ...+.+..++.
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 57788999999999999888753 1 11355555443
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=86.79 E-value=0.46 Score=30.85 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=26.7
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
|.++|.||+ .+|..+|..|.+.|.+ |.+..+.+
T Consensus 22 ~~vvIiGgG-~~G~E~A~~l~~~g~~--Vtlve~~~ 54 (115)
T d1lvla2 22 QHLVVVGGG-YIGLELGIAYRKLGAQ--VSVVEARE 54 (115)
T ss_dssp SEEEEECCS-HHHHHHHHHHHHHTCE--EEEECSSS
T ss_pred CeEEEECCC-HHHHHHHHHHhhcccc--eEEEeeec
Confidence 567777664 8999999999999997 77766654
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=86.65 E-value=1.3 Score=29.75 Aligned_cols=86 Identities=17% Similarity=0.121 Sum_probs=52.7
Q ss_pred cCeEEEEecCC---CchhHHHHHHHHhcCCccEEEEeecCCC--Cccc--hhhhhhcCCCceeEEEecCCChHHHHHHHH
Q 026924 27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPN--GATG--LLDLKNRFPERLDVLQLDLTVESTIEASAK 99 (231)
Q Consensus 27 ~~k~~LVtGas---~gIG~aia~~l~~~G~~~~vi~~~r~~~--~~~~--~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~ 99 (231)
+-|++.|.|+| +..|..+.+.|.+.|++ +....-+.. .... ........+..+..+.+= ...+.+..+++
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~--~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v~-~p~~~v~~~v~ 88 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVF-RPPSALMDHLP 88 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEETTEECBSSGGGCCSCCSEEEEC-SCHHHHTTTHH
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCC--ceEEEeccccceeeceecccchhhccCCCceEEEe-ccHHHHHHHHH
Confidence 45789999998 57999999999999997 554443322 1111 222222333444433332 35677888888
Q ss_pred HHHHHcCCccEEEEcccc
Q 026924 100 SIKEKYGSLNLLINASGI 117 (231)
Q Consensus 100 ~~~~~~g~id~lv~~ag~ 117 (231)
+..+. .+..++...|.
T Consensus 89 ~~~~~--g~k~i~~q~G~ 104 (136)
T d1iuka_ 89 EVLAL--RPGLVWLQSGI 104 (136)
T ss_dssp HHHHH--CCSCEEECTTC
T ss_pred HHHhh--CCCeEEEecCc
Confidence 87665 24555555654
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=86.50 E-value=0.51 Score=34.57 Aligned_cols=36 Identities=28% Similarity=0.204 Sum_probs=29.7
Q ss_pred ccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 26 ~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
-.+|.++|.||+ --|...|..|+++|++ |.+..++.
T Consensus 47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~--v~l~E~~~ 82 (233)
T d1djqa3 47 KNKDSVLIVGAG-PSGSEAARVLMESGYT--VHLTDTAE 82 (233)
T ss_dssp SSCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSS
T ss_pred cCCceEEEEccc-HHHHHHHHHHHHhccc--eeeEeecc
Confidence 367889999986 6789999999999997 77777654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.56 E-value=0.46 Score=31.33 Aligned_cols=36 Identities=22% Similarity=0.091 Sum_probs=29.4
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG 66 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~ 66 (231)
.|.++|.||+ -||..+|..|.+.|.+ |.+..|++..
T Consensus 25 p~~~viiG~G-~iglE~A~~~~~~G~~--Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIGAG-YIGLEMGSVWGRIGSE--VTVVEFASEI 60 (123)
T ss_dssp CSEEEESCCS-HHHHHHHHHHHHHTCE--EEEECSSSSS
T ss_pred CCeEEEEccc-hHHHHHHHHHHhcCCe--EEEEEEcccc
Confidence 3678888875 8999999999999997 7777776643
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=85.54 E-value=0.49 Score=35.53 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=30.5
Q ss_pred cCeEEEEecCCCchhHHH-----HHHHHhcCCccEEEEeecCCC
Q 026924 27 KGGVSLVQGASRGIGLEF-----AKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~ai-----a~~l~~~G~~~~vi~~~r~~~ 65 (231)
.++.++|+.|-||.|+.. |..|+++|.+ |+++|.+..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~r--VllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFD--VHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCC--EEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCc--EEEEeCCCC
Confidence 567788888899999876 7899999998 888888754
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=85.51 E-value=0.46 Score=36.75 Aligned_cols=36 Identities=28% Similarity=0.263 Sum_probs=28.7
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
+.|+++|.||+ -=|+.+|..|+++|.+ |.+..++..
T Consensus 1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~--V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGAG-FSGAVIGRQLAEKGHQ--VHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHTTTCE--EEEEESSSS
T ss_pred CCCEEEEECCc-HHHHHHHHHHHhCCCC--EEEEECCCC
Confidence 35789999886 5678899999999997 777777653
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=85.47 E-value=0.5 Score=34.78 Aligned_cols=35 Identities=29% Similarity=0.166 Sum_probs=27.8
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~ 65 (231)
.++|+|.||+ --|+.+|..|+++|.+ |.+.+|+.+
T Consensus 4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~--v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGGS-ISGLTAALMLRDAGVD--VDVYERSPQ 38 (265)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred CCcEEEECcC-HHHHHHHHHHHHCCCC--EEEEeCCCC
Confidence 4568888876 5788888899999997 888887643
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=85.42 E-value=0.44 Score=31.41 Aligned_cols=32 Identities=38% Similarity=0.348 Sum_probs=25.2
Q ss_pred eEEEEecCCCchhHHHHHHHHhcCCccEEEEeecC
Q 026924 29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 29 k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~ 63 (231)
+.++|.||+ -||..+|..|.+.|.+ |.++.|+
T Consensus 21 ~~vvIIGgG-~iG~E~A~~l~~lG~~--Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGAS-YVALECAGFLAGIGLD--VTVMVRS 52 (122)
T ss_dssp CSEEEECCS-HHHHHHHHHHHHTTCC--EEEEESS
T ss_pred CeEEEECCC-ccHHHHHHHHhhcCCe--EEEEEec
Confidence 457777765 8999999999999998 5444564
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=85.16 E-value=0.59 Score=34.00 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=51.4
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|.+||-.|+++|--.++..++...+.+ |+.++.+++..+...+..+..+ .++.++..|..+.. ...
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~--V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~ 142 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGL--VVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEF 142 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCE--EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCc--EEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccc
Confidence 4778999998876555544444443443 8899998877776655544433 36777777764321 122
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
++.|.++.+++..
T Consensus 143 ~~fD~I~~~~~~~ 155 (213)
T d1dl5a1 143 SPYDVIFVTVGVD 155 (213)
T ss_dssp CCEEEEEECSBBS
T ss_pred cchhhhhhhccHH
Confidence 5789999887643
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=84.95 E-value=0.95 Score=33.03 Aligned_cols=78 Identities=15% Similarity=0.108 Sum_probs=56.3
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCC-CceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|.++|..|+++|--.++..+|+ |.+ |+.++++++-.+...+.++..+ .++.++..|..+-. ...
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~--V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~ 143 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTD--VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPK 143 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSC--EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG
T ss_pred ccceEEEecCCCChhHHHHHHhh--Cce--eEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------ccc
Confidence 46789999999888888877776 343 8888888766665555555444 58999999985421 223
Q ss_pred CCccEEEEccccC
Q 026924 106 GSLNLLINASGIL 118 (231)
Q Consensus 106 g~id~lv~~ag~~ 118 (231)
++.|.++.+++..
T Consensus 144 ~pfD~Iiv~~a~~ 156 (215)
T d1jg1a_ 144 APYDVIIVTAGAP 156 (215)
T ss_dssp CCEEEEEECSBBS
T ss_pred CcceeEEeecccc
Confidence 6899999888754
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=84.84 E-value=0.43 Score=36.25 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=26.2
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
|+|.||+ -+|.++|.+|+++|.+ .|.+++|+.
T Consensus 4 ViIIGaG-i~G~s~A~~La~~G~~-~V~liE~~~ 35 (305)
T d1pj5a2 4 IVIIGAG-IVGTNLADELVTRGWN-NITVLDQGP 35 (305)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCC-CEEEECSSC
T ss_pred EEEECcC-HHHHHHHHHHHHcCCC-cEEEEeCCC
Confidence 7788876 7999999999999974 388888764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=84.78 E-value=0.42 Score=36.19 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=28.5
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
+.|.|+|+||+ --|++.|.+|+++|++ |.+..+++
T Consensus 29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~--V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQ--VTVLEASE 63 (370)
T ss_dssp SCCEEEEECCB-HHHHHHHHHHHHHTCE--EEEECSSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCC--EEEEeCCC
Confidence 35789999886 5689999999999997 87877754
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.60 E-value=0.73 Score=31.69 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=26.5
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++.++|.||+ ..|...|..+.+.|++ .|.++.|.+
T Consensus 45 ~~kVvVIGGG-dtA~D~A~~a~r~GA~-~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLGAG-DTAFDCATSALRCGAR-RVFLVFRKG 79 (153)
T ss_dssp CSEEEEECSS-HHHHHHHHHHHHTTCS-EEEEECSSC
T ss_pred CCEEEEECCC-hhHHHHHHHHHHcCCc-ceeEEEeCC
Confidence 4457777654 7899999999999998 677776654
|
| >d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: "Helical backbone" metal receptor family: Nitrogenase iron-molybdenum protein domain: Nitrogenase iron-molybdenum protein, alpha chain species: Azotobacter vinelandii [TaxId: 354]
Probab=84.34 E-value=2 Score=35.19 Aligned_cols=81 Identities=10% Similarity=-0.030 Sum_probs=51.7
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK 104 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~ 104 (231)
.+.||++.|.|+. ....++++.|.+.|.+ ++.+.......+......+..+..... .|=.+..++++++++.
T Consensus 342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGme--vv~~~~~~~~~~d~~~~~~~~~~~~~i--~~d~~~~el~~~i~~~--- 413 (477)
T d1m1na_ 342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGME--VVGTGYEFAHNDDYDRTMKEMGDSTLL--YDDVTGYEFEEFVKRI--- 413 (477)
T ss_dssp HHTTCEEEECBSS-SHHHHTHHHHHTTTCE--EEEEEESSCCHHHHHTTTTTSCTTCEE--EESCBHHHHHHHHHHH---
T ss_pred hhcCCcEEEecCc-hhHHHHHHHHHHCCCE--EEEEeecCCChHHHHHHHHhcCCCcEE--ecCCCHHHHHHHHHhc---
Confidence 5689999998765 5889999999999997 555544333333333333333333322 3444667777777775
Q ss_pred cCCccEEEEcc
Q 026924 105 YGSLNLLINAS 115 (231)
Q Consensus 105 ~g~id~lv~~a 115 (231)
++|.++-+.
T Consensus 414 --~pDL~ig~~ 422 (477)
T d1m1na_ 414 --KPDLIGSGI 422 (477)
T ss_dssp --CCSEEEECH
T ss_pred --CCCEEEECc
Confidence 789998443
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=83.54 E-value=0.78 Score=33.18 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=28.7
Q ss_pred cCeEEEEecCCCchhH-----HHHHHHHhcCCccEEEEeecC
Q 026924 27 KGGVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATCRN 63 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~-----aia~~l~~~G~~~~vi~~~r~ 63 (231)
.+|++.|+|+-||.|. .+|..|++.|.+ |+++|-+
T Consensus 1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~--VlliD~D 40 (237)
T d1g3qa_ 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRK--VLAVDGD 40 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCC--EEEEeCC
Confidence 3789999999998886 467888899998 7777754
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=82.87 E-value=0.64 Score=34.73 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=25.8
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
++|.||+ -.|.++|.+|+++|.+ |+++++..
T Consensus 6 vvIIGaG-i~Gls~A~~La~~G~~--V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGAG-SMGMAAGYQLAKQGVK--TLLVDAFD 36 (281)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCC--EEEECSSC
T ss_pred EEEECcC-HHHHHHHHHHHHCCCc--EEEEeCCC
Confidence 7788765 6899999999999998 77777753
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=82.28 E-value=1.1 Score=29.53 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=28.1
Q ss_pred CeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 28 ~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.+.++|.||+ -||..+|..|.+.|.+ |.++.+.+
T Consensus 26 p~~vvIiGgG-~IG~E~A~~~~~~G~~--Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGGG-IIGLEMGTVYSTLGSR--LDVVEMMD 59 (125)
T ss_dssp CSEEEEESCS-HHHHHHHHHHHHHTCE--EEEECSSS
T ss_pred CCeEEEECCC-HHHHHHHHHhhcCCCE--EEEEEeec
Confidence 4678888875 8999999999999997 77776654
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=82.21 E-value=6.4 Score=27.67 Aligned_cols=140 Identities=9% Similarity=-0.032 Sum_probs=73.6
Q ss_pred ccCeEEEEecCC--CchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHH
Q 026924 26 WKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE 103 (231)
Q Consensus 26 ~~~k~~LVtGas--~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~ 103 (231)
..|+++++.... ..+..+++..|.+.|.. +.....+.. .+ ...+.+.+ .
T Consensus 23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~--~~~~~~~~~-----------------------~~---~~~l~~~~-~ 73 (209)
T d2fr1a2 23 LDGTWLVAKYAGTADETSTAAREALESAGAR--VRELVVDAR-----------------------CG---RDELAERL-R 73 (209)
T ss_dssp CCSEEEEEECTTSSHHHHHHHHHHHHTTSCE--EEEEECCTT-----------------------CC---HHHHHHHH-T
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHHhCCCe--EEEecCCCc-----------------------cC---HHHHHHHh-h
Confidence 356655554332 34777888899999986 443322211 11 12223322 3
Q ss_pred HcCCccEEEEccccCCCCCCCCCCcccchhchHHHhhhhhhhhhHHHHHHHHhhhhhhcCCCCcccCceEEEEeccCccc
Q 026924 104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS 183 (231)
Q Consensus 104 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~ 183 (231)
..+.++.||+..+... ...... ......+...+.++|.+...-. . .++.+++.....
T Consensus 74 ~~~~~~~vv~l~~~~~------~~~~~~--------~~~~~~~~~~l~l~qal~~~~~---~------~~l~~vT~~a~~ 130 (209)
T d2fr1a2 74 SVGEVAGVLSLLAVDE------AEPEEA--------PLALASLADTLSLVQAMVSAEL---G------CPLWTVTESAVA 130 (209)
T ss_dssp TSCCCSEEEECTTTTC------CCCSSC--------GGGCHHHHHHHHHHHHHHHTTC---C------CCEEEEEESCSC
T ss_pred ccCCCCeEEEeCCCCC------CCCcch--------hHHHHHHHHHHHHHHHHHhCCC---C------CcEEEEEcCCcc
Confidence 4467899998876532 011111 1112234555666676543211 1 144444432211
Q ss_pred cCCCCCCCccchhhhHHHHHHHHHHhhhhccccCCcee
Q 026924 184 IGDNRLGGWHSYRASKAALNHDKICVSGVWSKEGSSYM 221 (231)
Q Consensus 184 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~~~ 221 (231)
.. ++-..-....+++-+|+|+++.|+....++.+
T Consensus 131 ~~----~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~v 164 (209)
T d2fr1a2 131 TG----PFERVRNAAHGALWGVGRVIALENPAVWGGLV 164 (209)
T ss_dssp SS----TTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEE
T ss_pred cC----CCcccCCHhHHhHHHHHHHHHHhCCCceEEEE
Confidence 11 22223456788999999999999987666644
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.19 E-value=0.71 Score=32.98 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=25.9
Q ss_pred EEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 31 ~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
|+|.|| |--|+..|..|+++|.+ |.++.++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~--V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKK--VLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCC--EEEEcCCC
Confidence 688885 46789999999999998 88888865
|
| >d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: "Helical backbone" metal receptor family: Nitrogenase iron-molybdenum protein domain: Nitrogenase iron-molybdenum protein, beta chain species: Klebsiella pneumoniae [TaxId: 573]
Probab=82.17 E-value=1.6 Score=36.26 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=50.4
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCcc-chhhhhhcCC--CceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~-~~~~~~~~~~--~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.+.||++.|.|. .....++++.|.+.|..+.++++........ .+.+.+...+ .....+ .-.|..++++++.+.
T Consensus 357 ~l~GkrvaI~gd-~~~~~~la~fL~ElG~e~~~v~~~~~~~~~~~~~~~~l~~~~~g~~~~v~--~~~Dl~~l~~~i~~~ 433 (519)
T d1qh8b_ 357 WLHGKKFGLYGD-PDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVF--INCDLWHFRSLMFTR 433 (519)
T ss_dssp HHTTCEEEEESC-HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEE--ESCCHHHHHHHHHHH
T ss_pred HcCCcEEEEECC-cHHHHHHHHHHHHcCCeeeEEEecCCCHHHHHHHHHHHHhCcCCCCCEEE--ECCCHHHHHHHHhhc
Confidence 467999999876 4678889999999999833333332222222 2344444332 233333 344667777777665
Q ss_pred HHHcCCccEEEEcc
Q 026924 102 KEKYGSLNLLINAS 115 (231)
Q Consensus 102 ~~~~g~id~lv~~a 115 (231)
++|.+|-|.
T Consensus 434 -----~pDLliG~s 442 (519)
T d1qh8b_ 434 -----QPDFMIGNS 442 (519)
T ss_dssp -----CCSEEEECT
T ss_pred -----CCCEEEECC
Confidence 799998554
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=81.79 E-value=0.75 Score=35.15 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=21.2
Q ss_pred eEEEEecCCCchhH-----HHHHHHHhcCCccEEEEeec
Q 026924 29 GVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATCR 62 (231)
Q Consensus 29 k~~LVtGas~gIG~-----aia~~l~~~G~~~~vi~~~r 62 (231)
|++||++|+.| |. +++++|.++|++ |..++.
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~e--V~~i~~ 36 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQ--VRWLGT 36 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCE--EEEEEC
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCE--EEEEEe
Confidence 45666665444 65 689999999998 554443
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=81.37 E-value=0.69 Score=32.96 Aligned_cols=31 Identities=10% Similarity=0.093 Sum_probs=25.8
Q ss_pred eEEEEecCCCchhH-----HHHHHHHhcCCccEEEEee
Q 026924 29 GVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATC 61 (231)
Q Consensus 29 k~~LVtGas~gIG~-----aia~~l~~~G~~~~vi~~~ 61 (231)
|.+.|||-+.|.|. .+|..|+++|++ |.+.+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~r--Vl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYR--TAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCC--EEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCe--EEEEC
Confidence 78999999888886 567889999998 66665
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=81.20 E-value=0.72 Score=32.16 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=32.5
Q ss_pred ccccCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCC
Q 026924 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP 64 (231)
Q Consensus 24 ~~~~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~ 64 (231)
.-+.||+++|.|=+ -+|+.+|.+|...|++ |+++..++
T Consensus 19 ~~laGk~vvV~GYG-~vGrG~A~~~rg~Ga~--V~V~E~DP 56 (163)
T d1v8ba1 19 FLISGKIVVICGYG-DVGKGCASSMKGLGAR--VYITEIDP 56 (163)
T ss_dssp CCCTTSEEEEECCS-HHHHHHHHHHHHHTCE--EEEECSCH
T ss_pred ceecCCEEEEeccc-ccchhHHHHHHhCCCE--EEEEecCc
Confidence 34689999999854 7999999999999997 88887765
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=80.98 E-value=1 Score=33.41 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=27.5
Q ss_pred cccCeEEEEecCCCchhHHHHHHHHh-cCCccEEEEeec
Q 026924 25 KWKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCR 62 (231)
Q Consensus 25 ~~~~k~~LVtGas~gIG~aia~~l~~-~G~~~~vi~~~r 62 (231)
+++||+++|-|- |..|..+|+.|++ .|++ .|.+.+.
T Consensus 29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~k-vv~vsD~ 65 (239)
T d1gtma1 29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMK-VVAVSDS 65 (239)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEEECS
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCcc-eeecccc
Confidence 478999999987 5699999999986 5886 3333443
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=80.75 E-value=1.2 Score=31.51 Aligned_cols=75 Identities=20% Similarity=0.193 Sum_probs=51.8
Q ss_pred cCeEEEEecCCCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCC-ceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+++.+|=.|++.| + .+..|+++|++ |+.+|-++..++.+....+..+. .+.+...|+.+..- -
T Consensus 30 ~~grvLDiGcG~G--~-~~~~la~~g~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 93 (198)
T d2i6ga1 30 APGRTLDLGCGNG--R-NSLYLAANGYD--VTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------D 93 (198)
T ss_dssp CSCEEEEETCTTS--H-HHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------C
T ss_pred CCCcEEEECCCCC--H-HHHHHHHHhhh--hccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------c
Confidence 4567999999644 3 56688899996 88999988877776555444443 57777788765431 1
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
+..|+++.+.-+
T Consensus 94 ~~fD~I~~~~~~ 105 (198)
T d2i6ga1 94 GEYDFILSTVVM 105 (198)
T ss_dssp CCEEEEEEESCG
T ss_pred ccccEEEEeeee
Confidence 467988866543
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=80.73 E-value=2.3 Score=29.78 Aligned_cols=82 Identities=17% Similarity=0.230 Sum_probs=54.2
Q ss_pred cccCeEEEEecC-CCchhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcC--CCceeEEEecCCChHHHHHHHHHH
Q 026924 25 KWKGGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI 101 (231)
Q Consensus 25 ~~~~k~~LVtGa-s~gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dls~~~~v~~~~~~~ 101 (231)
.++|+.+|=..+ +|.+|.+ .+.+|++ .|+.++.+....+.+.+-.+.. ..++.++..|+. +++++.
T Consensus 39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~-~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~ 107 (182)
T d2fhpa1 39 YFDGGMALDLYSGSGGLAIE----AVSRGMD-KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQF 107 (182)
T ss_dssp CCSSCEEEETTCTTCHHHHH----HHHTTCS-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHH
T ss_pred hcCCCEEEEcccccccccce----eeecchh-HHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhh
Confidence 357788775555 5667775 5568888 7999999987777655443322 336778887762 334554
Q ss_pred HHHcCCccEEEEcccc
Q 026924 102 KEKYGSLNLLINASGI 117 (231)
Q Consensus 102 ~~~~g~id~lv~~ag~ 117 (231)
.+...+.|+++..+.+
T Consensus 108 ~~~~~~fDlIflDPPY 123 (182)
T d2fhpa1 108 YEEKLQFDLVLLDPPY 123 (182)
T ss_dssp HHTTCCEEEEEECCCG
T ss_pred cccCCCcceEEechhh
Confidence 4444578999977753
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=80.16 E-value=1.9 Score=29.91 Aligned_cols=79 Identities=14% Similarity=0.080 Sum_probs=44.8
Q ss_pred cCeEEEEecCCC-chhHHHHHHHHhcCCccEEEEeecCCCCccchhhhhhcCCCceeEEEecCCChHHHHHHHHHHHHHc
Q 026924 27 KGGVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY 105 (231)
Q Consensus 27 ~~k~~LVtGas~-gIG~aia~~l~~~G~~~~vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dls~~~~v~~~~~~~~~~~ 105 (231)
+|+.+|=.|+++ .+| ..++.+|++ ++.++.++...+.+.+-.+..+........|. +. +........
T Consensus 41 ~g~~vLDl~~G~G~~~----i~a~~~ga~--vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~---~~~~~~~~~ 108 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVG----LEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EV---FLPEAKAQG 108 (171)
T ss_dssp TCCEEEEETCSSCHHH----HHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HH---HHHHHHHTT
T ss_pred CCCeEEEeccccchhh----hhhhhccch--hhhcccCHHHHhhhhHHHHhhccccceeeeeh---hc---ccccccccC
Confidence 577777666654 444 356667997 77788888777765544443333322222221 21 223333333
Q ss_pred CCccEEEEcccc
Q 026924 106 GSLNLLINASGI 117 (231)
Q Consensus 106 g~id~lv~~ag~ 117 (231)
.+.|+++.++.+
T Consensus 109 ~~fD~If~DPPY 120 (171)
T d1ws6a1 109 ERFTVAFMAPPY 120 (171)
T ss_dssp CCEEEEEECCCT
T ss_pred CccceeEEcccc
Confidence 578999988753
|